BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5279
(1310 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI 233
V+ + + D YD +ELG G G+V+ VE+++GR + AK + K KNE+ I
Sbjct: 42 VEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI 101
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSG 292
MNQL H L+ LHD++E K +I E GGEL + + Y +E ++ +Y+RQ G
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
L +MH SI HL + P +++ + + DFGL+ KLNP E
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT------KLNPDE 205
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 957 DGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFA 1016
+GL+++H + HL+I+P+N++ + ++ VK+ID G ++ I + T EFA
Sbjct: 160 EGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP--DEIVKVTTATAEFA 217
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1075
APE++ EP+ TD+W+ GVL YVLLSG SPF G+ + ET QNV + F E F +
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277
Query: 1076 TQEATRFLMLIFKHE 1090
+ EA F+ + + E
Sbjct: 278 SPEAKDFIKNLLQKE 292
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APE++ EP+ TD+W+ GVL YVLLSG SPF G+ + ET QNV + F E F +
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ EA F+ + ++ P KR TV + E+ WL
Sbjct: 278 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 464 GGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + + Y +E ++ +Y+RQ GL +MH SI HL + P +++ +
Sbjct: 132 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVK 191
Query: 523 LTDFGLSRRITSFGKLNPLE 542
+ DFGL+ KLNP E
Sbjct: 192 IIDFGLAT------KLNPDE 205
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 49 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 92
V+ + + D YD +ELG G G+V+ VE+++GR + AK +
Sbjct: 42 VEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFIN 85
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFD 645
P+E D Y + E+ G F VV + EKA VA + + V E
Sbjct: 41 PVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEIS 100
Query: 646 NLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR-HEYTEQNVATIIS 704
+ L H ++ +L +A++ VL++E L G ++ +++ ++ +E V +
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYE----MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 705 QAWE 708
QA E
Sbjct: 157 QACE 160
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 87/142 (61%), Gaps = 1/142 (0%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
LG G G V+ E ++G AAK++ +G + K KNE+ +MNQL H NL++L+D++E
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 251 TKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
+K+ ++ E GGEL + +SY TE D +++Q+ G+ +MH++ I HL L P
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPE 216
Query: 310 DLLVAHPGGRHLLLTDFGLSRR 331
++L + + + + DFGL+RR
Sbjct: 217 NILCVNRDAKQIKIIDFGLARR 238
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 85/143 (59%), Gaps = 3/143 (2%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
+ + +G++++H + HL+++P+N++ + + Q+K+ID G +R L +N
Sbjct: 193 MKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL--KVNFG 250
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-Y 1070
PEF APEV+ + + TD+WS GV+AY+LLSG SPF G ++ ET N+ R+ E
Sbjct: 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDE 310
Query: 1071 LFKELTQEATRFLMLIFKHEVDW 1093
F+++++EA F+ + E W
Sbjct: 311 EFQDISEEAKEFISKLLIKEKSW 333
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 1109 DLKRETNYTFRLSAKNV----IGWSEKGIPSALFKTKEQAPEVLAEEPI------FPQTD 1158
DLK E AK + G + + P K PE LA E + FP TD
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFP-TD 270
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFKRA 1217
+WS GV+AY+LLSG SPF G ++ ET N+ R+ E F+++++EA F+ + +
Sbjct: 271 MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKE 330
Query: 1218 PGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
R + E ++ WL S++ + R A NR + D
Sbjct: 331 KSWRISASEALKHPWL--SDHKLHSRLSAQKKKNRGSDAQD 369
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 464 GGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + +SY TE D +++Q+ G+ +MH++ I HL L P ++L + + +
Sbjct: 170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIK 229
Query: 523 LTDFGLSRR 531
+ DFGL+RR
Sbjct: 230 IIDFGLARR 238
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ------YKSLFKNE 230
+ + + D YD G+ELG G IV E+S+G YAAK + + ++ + + E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ Q+ H N++ LHD YE + +I EL GGEL L ++ +E + +I+Q+L
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
G++Y+H IAH L P ++++ H+ L DFGL+ I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +LDG+ YLH + + H +++P+N+++ ++ +KLID G + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F
Sbjct: 181 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
E F + ++ A F+ L+ K +T+ + H
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F E F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEY 1260
++ A F+ + + KR T++E + W+ P ++ + +RE V L N F +Y
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLEN----FKKQY 301
Query: 1261 HDLKNKQFTSDSLSSLHKTLTRS 1283
++ + S S+ SL LTRS
Sbjct: 302 --VRRRWKLSFSIVSLCNHLTRS 322
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 449 PDVKTWEDNVPNRG---------PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 499
P++ T D NR GGEL L ++ +E + +I+Q+L G++Y+H
Sbjct: 75 PNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 500 SIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 532
IAH L P ++++ H+ L DFGL+ I
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ + + D YD G+ELG G IV E+S+G YAAK + + + + V E+ E E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65
Query: 112 YS 113
S
Sbjct: 66 VS 67
Score = 37.4 bits (85), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F++V K EK+ T AAK + ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ H I +L + Y+ T VL++E + G ++ +L+ + +E+ + I Q
Sbjct: 71 QVLHPNIITLHDVYENRTD----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
+ + + D YD G+ELG G IV E+S+G YAAK + + ++ + + E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ Q+ H N++ LHD YE + +I EL GGEL L ++ +E + +I+Q+L
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
G++Y+H IAH L P ++++ H+ L DFGL+ I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +LDG+ YLH + + H +++P+N+++ ++ +KLID G + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F
Sbjct: 181 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
E F + ++ A F+ L+ K +T+ + H
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F E F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEF 1256
++ A F+ + + KR T++E + W+ P ++ + +RE V L N K++
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY 301
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHL 521
GGEL L ++ +E + +I+Q+L G++Y+H IAH L P ++++ H+
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 522 LLTDFGLSRRI 532
L DFGL+ I
Sbjct: 159 KLIDFGLAHEI 169
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ + + D YD G+ELG G IV E+S+G YAAK + + + + V E+ E E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 112 YS 113
S
Sbjct: 66 VS 67
Score = 37.7 bits (86), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F++V K EK+ T AAK + + ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ H + +L + Y+ T VL++E + G ++ +L+ + +E+ + I Q
Sbjct: 71 QVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
+ + + D YD G+ELG G IV E+S+G YAAK + + ++ + + E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ Q+ H N++ LHD YE + +I EL GGEL L ++ +E + +I+Q+L
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
G++Y+H IAH L P ++++ H+ L DFGL+ I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +LDG+ YLH + + H +++P+N+++ ++ +KLID G + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F
Sbjct: 181 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
E F + ++ A F+ L+ K +T+ + H
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F E F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEY 1260
++ A F+ + + KR T++E + W+ P ++ + +RE V L N K++
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY---- 301
Query: 1261 HDLKNKQFTSDSLSSLHKTLTR 1282
++ + + S+ SL LTR
Sbjct: 302 --VRRRSKLAFSIVSLCNHLTR 321
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHL 521
GGEL L ++ +E + +I+Q+L G++Y+H IAH L P ++++ H+
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 522 LLTDFGLSRRI 532
L DFGL+ I
Sbjct: 159 KLIDFGLAHEI 169
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ + + D YD G+ELG G IV E+S+G YAAK + + + + V E+ E E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 112 YS 113
S
Sbjct: 66 VS 67
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F++V K EK+ T AAK + + ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ H + +L + Y+ T VL++E + G ++ +L+ + +E+ + I Q
Sbjct: 71 QVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
+ + + D YD G+ELG G IV E+S+G YAAK + + ++ + + E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ Q+ H N++ LHD YE + +I EL GGEL L ++ +E + +I+Q+L
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
G++Y+H IAH L P ++++ H+ L DFGL+ I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +LDG+ YLH + + H +++P+N+++ ++ +KLID G + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F+
Sbjct: 181 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 1070 YLF----KELTQEATRFLML 1085
F EL ++ R L++
Sbjct: 239 EEFFSHTSELAKDFIRKLLV 258
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F E F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEY 1260
++ A F+ + + KR T++E + W+ P ++ + +RE V L N K++
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY---- 301
Query: 1261 HDLKNKQFTSDSLSSLHKTLTR 1282
++ + S S+ SL LTR
Sbjct: 302 --VRRRWKLSFSIVSLCNHLTR 321
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHL 521
GGEL L ++ +E + +I+Q+L G++Y+H IAH L P ++++ H+
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 522 LLTDFGLSRRI 532
L DFGL+ I
Sbjct: 159 KLIDFGLAHEI 169
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ + + D YD G+ELG G IV E+S+G YAAK + + + + V E+ E E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 112 YS 113
S
Sbjct: 66 VS 67
Score = 37.7 bits (86), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F++V K EK+ T AAK + + ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ H + +L + Y+ T VL++E + G ++ +L+ + +E+ + I Q
Sbjct: 71 QVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
+ + + D YD G+ELG G IV E+S+G YAAK + + ++ + + E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ Q+ H N++ LHD YE + +I EL GGEL L ++ +E + +I+Q+L
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
G++Y+H IAH L P ++++ H+ L DFGL+ I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +LDG+ YLH + + H +++P+N+++ ++ +KLID G + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F
Sbjct: 181 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
E F ++ A F+ L+ K +T+ + H
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F E F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEY 1260
++ A F+ + + KR T++E + W+ P ++ + +RE V L N K++
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY---- 301
Query: 1261 HDLKNKQFTSDSLSSLHKTLTR 1282
++ + + S+ SL LTR
Sbjct: 302 --VRRRSKLAFSIVSLCNHLTR 321
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHL 521
GGEL L ++ +E + +I+Q+L G++Y+H IAH L P ++++ H+
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 522 LLTDFGLSRRI 532
L DFGL+ I
Sbjct: 159 KLIDFGLAHEI 169
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ + + D YD G+ELG G IV E+S+G YAAK + + + + V E+ E E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 112 YS 113
S
Sbjct: 66 VS 67
Score = 37.4 bits (85), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F++V K EK+ T AAK + + ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ H + +L + Y+ T VL++E + G ++ +L+ + +E+ + I Q
Sbjct: 71 QVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 100/165 (60%), Gaps = 8/165 (4%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +LDG+ YLH + + H +++P+N+++ +V + ++KLID G ++ +
Sbjct: 114 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 173
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G+++ ET N++ V Y F
Sbjct: 174 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 231
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
E F ++ A F+ L+ K +T+A +++H W +K ++R
Sbjct: 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS-W-IKAIRR 274
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNELDIM 234
+ D Y+ G+ELG G IV ++ +G+ YAAK + + + + + E++I+
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 235 NQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
++ H N++ LHD +E K +I EL GGEL L + TE + +++Q+L G+
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 295 YMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITS 334
Y+H IAH L P ++++ P R + L DFG++ +I +
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEA 164
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 1137 LFKTKE-QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1195
+F T E APE++ EP+ + D+WS GV+ Y+LLSGASPF G+++ ET N++ V Y F
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 230
Query: 1196 -EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
E F ++ A F+ + + P +R T+ + E+ W+
Sbjct: 231 DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 447 RGPDVKTWEDNVPNRG---------PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 497
R P++ T D N+ GGEL L + TE + +++Q+L G+ Y+H
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125
Query: 498 RLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITS 534
IAH L P ++++ P R + L DFG++ +I +
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEA 164
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-------DTLHQVNTEFDNLR 648
D Y+ E+ G+F++V K +K T AAK + + ++ E + LR
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
+RH I +L + ++ T VL++E + G ++ +L+ + TE + Q +
Sbjct: 64 EIRHPNIITLHDIFENKTD----VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 119
Query: 709 --HYLKKNR 715
HYL R
Sbjct: 120 GVHYLHSKR 128
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ D Y+ G+ELG G IV ++ +G+ YAAK + + S V E+ E E
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 58
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
+ + + D YD G+ELG G IV E+S+G YAAK + + ++ + + E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ Q+ H N++ LHD YE + +I EL GGEL L ++ +E + +I+Q+L
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
G++Y+H IAH L P ++++ H+ L DFGL+ I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +LDG+ YLH + + H +++P+N+++ ++ +KLID G + +
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F+
Sbjct: 181 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 1070 YLF----KELTQEATRFLML 1085
F EL ++ R L++
Sbjct: 239 EEFFSHTSELAKDFIRKLLV 258
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F E F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
++ A F+ + + KR T++E + W+ P
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHL 521
GGEL L ++ +E + +I+Q+L G++Y+H IAH L P ++++ H+
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 522 LLTDFGLSRRI 532
L DFGL+ I
Sbjct: 159 KLIDFGLAHEI 169
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ + + D YD G+ELG G IV E+S+G YAAK + + + + V E+ E E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 112 YS 113
S
Sbjct: 66 VS 67
Score = 37.7 bits (86), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F++V K EK+ T AAK + + ++ E LR
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ H + +L + Y+ T VL++E + G ++ +L+ + +E+ + I Q
Sbjct: 71 QVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG GV +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG GV +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
++D ++ ELGRG T IVY ++ + + YA KV+ K K + + E+ ++ +L H
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL--KKTVDKKIVRTEIGVLLRLSHP 108
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
N+++L + +ET +++ EL GGEL + + YY+E D A ++Q+L + Y+H
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG 168
Query: 301 IAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
I H L P +LL A P L + DFGLS+ +
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A V +L+ + YLH G+ H +++P+N++ A+ +K+ D G ++ V +
Sbjct: 151 ADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV 210
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
TP + APE+L P+ D+WS G++ Y+LL G PF
Sbjct: 211 CGTPG--YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + YY+E D A ++Q+L + Y+H I H L P +LL A P L
Sbjct: 132 GGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLK 191
Query: 523 LTDFGLSRRI 532
+ DFGLS+ +
Sbjct: 192 IADFGLSKIV 201
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF---RGQSEPETRQNVNFVRYRFEYLFK 1200
APE+L P+ D+WS G++ Y+LL G PF RG + R+ +N Y +
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-QFMFRRILNCEYYFISPWWD 276
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
E++ A + + P KR T + ++ W+
Sbjct: 277 EVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHER 654
+D ++ SE+ RG S+V + +K T+ A K+ + + D V TE L L H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQK-GTQKPYALKVLKKTVDK-KIVRTEIGVLLRLSHPN 109
Query: 655 IASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HYLK 712
I L E ++ T S LV+E + G ++ + + Y+E++ A + Q E YL
Sbjct: 110 IIKLKEIFETPTEIS----LVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 713 KN 714
+N
Sbjct: 166 EN 167
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
++D ++ ELGRG T IVY ++ + + YA KV+
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL 86
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 99/165 (60%), Gaps = 8/165 (4%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +LDG+ YLH + + H +++P+N+++ +V + ++KLID G ++ +
Sbjct: 135 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 194
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G+++ ET N++ V Y F
Sbjct: 195 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 252
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
E F ++ A F+ L+ K + +A +++H W +K ++R
Sbjct: 253 EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS-W-IKAIRR 295
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNELDIM 234
+ D Y+ G+ELG G IV ++ +G+ YAAK + + + + + E++I+
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 235 NQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
++ H N++ LHD +E K +I EL GGEL L + TE + +++Q+L G+
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 143
Query: 295 YMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITS 334
Y+H IAH L P ++++ P R + L DFG++ +I +
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEA 185
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 1137 LFKTKE-QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1195
+F T E APE++ EP+ + D+WS GV+ Y+LLSGASPF G+++ ET N++ V Y F
Sbjct: 192 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 251
Query: 1196 -EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
E F ++ A F+ + + P +R + + E+ W+
Sbjct: 252 DEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 290
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 447 RGPDVKTWEDNVPNRG---------PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 497
R P++ T D N+ GGEL L + TE + +++Q+L G+ Y+H
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 146
Query: 498 RLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITS 534
IAH L P ++++ P R + L DFG++ +I +
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEA 185
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-------DTLHQVNTEFDNLR 648
D Y+ E+ G+F++V K +K T AAK + + ++ E + LR
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
+RH I +L + ++ T VL++E + G ++ +L+ + TE + Q +
Sbjct: 85 EIRHPNIITLHDIFENKTD----VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 140
Query: 709 --HYLKKNR 715
HYL R
Sbjct: 141 GVHYLHSKR 149
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ D Y+ G+ELG G IV ++ +G+ YAAK + + S V E+ E E
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIERE 79
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 93/155 (60%), Gaps = 6/155 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +LDG+ YLH + + H +++P+N+++ +V + ++KLID G ++ +
Sbjct: 121 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G+++ ET N++ V Y F
Sbjct: 181 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
E F ++ A F+ L+ K + +A +++H
Sbjct: 239 EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEH 273
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 10/167 (5%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNE 230
R + + D Y+ G+ELG G IV ++ +G+ YAAK + + + + + E
Sbjct: 6 RQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
++I+ ++ H N++ LHD +E K +I EL GGEL L + TE + +++Q+L
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITS 334
G+ Y+H IAH L P ++++ P R + L DFG++ +I +
Sbjct: 126 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEA 171
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G+++ ET N++ V Y F E F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ A F+ + + P +R + + E+ W+
Sbjct: 246 SELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 447 RGPDVKTWEDNVPNRG---------PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 497
R P++ T D N+ GGEL L + TE + +++Q+L G+ Y+H
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 132
Query: 498 RLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITS 534
IAH L P ++++ P R + L DFG++ +I +
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPR-IKLIDFGIAHKIEA 171
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 14/136 (10%)
Query: 589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-------DTLHQVN 641
+ E D Y+ E+ G+F++V K +K T AAK + + ++
Sbjct: 5 FRQEDVEDHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFIKKRRLSSSRRGVSREEIE 63
Query: 642 TEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVAT 701
E + LR +RH I +L + ++ T VL++E + G ++ +L+ + TE
Sbjct: 64 REVNILREIRHPNIITLHDIFENKTD----VVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 702 IISQAWE--HYLKKNR 715
+ Q + HYL R
Sbjct: 120 FLKQILDGVHYLHSKR 135
Score = 36.6 bits (83), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D Y+ G+ELG G IV ++ +G+ YAAK + + S V E+ E E
Sbjct: 6 RQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 65
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 133 AYDFGDELGRGV--TGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDE 190
YD DE G+ V GT+S + +V D +Y + V+ + + D YD +E
Sbjct: 6 GYDV-DEQGKIVRGKGTVSSNYDNYVFDIWKQYY------PQPVEIKHDHVLDHYDIHEE 58
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
LG G G+V+ ER++G N+AAK + K + E+ M+ L H LV LHD++E
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 251 TKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
+ +I E GGEL + + + +E + Y+RQ+ GL +MH + HL L P
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 178
Query: 310 DLLVAHPGGRHLLLTDFGLS 329
+++ L L DFGL+
Sbjct: 179 NIMFTTKRSNELKLIDFGLT 198
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
V GL ++H HL+++P+N++ + RS ++KLID G T + ++ + T E
Sbjct: 158 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV--KVTTGTAE 215
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFK 1073
FAAPEV +P+ TD+WS GVL+Y+LLSG SPF G+++ ET +NV + + F
Sbjct: 216 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 275
Query: 1074 ELTQEATRFL 1083
++++ F+
Sbjct: 276 GISEDGKDFI 285
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APEV +P+ TD+WS GVL+Y+LLSG SPF G+++ ET +NV + + F +
Sbjct: 218 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 277
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
+++ F+ + P R T+ + E+ WL P
Sbjct: 278 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 310
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + + + +E + Y+RQ+ GL +MH + HL L P +++ L
Sbjct: 132 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK 191
Query: 523 LTDFGLS 529
L DFGL+
Sbjct: 192 LIDFGLT 198
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQ-VNTEF 644
P+E + D Y E+ G F VV + E+A T N AAK H++ + V E
Sbjct: 41 PVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERA-TGNNFAAKFVMTPHESDKETVRKEI 99
Query: 645 DNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVAT 701
+ LRH + +L +A++ N V++ E + G ++ ++ H ++ A
Sbjct: 100 QTMSVLRHPTLVNLHDAFE----DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 152
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 49 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMT 92
V+ + + D YD +ELG G G+V+ ER++G N+AAK VMT
Sbjct: 42 VEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 86
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 133 AYDFGDELGRGV--TGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDE 190
YD DE G+ V GT+S + +V D +Y + V+ + + D YD +E
Sbjct: 112 GYDV-DEQGKIVRGKGTVSSNYDNYVFDIWKQY------YPQPVEIKHDHVLDHYDIHEE 164
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
LG G G+V+ ER++G N+AAK + K + E+ M+ L H LV LHD++E
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 251 TKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
+ +I E GGEL + + + +E + Y+RQ+ GL +MH + HL L P
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 284
Query: 310 DLLVAHPGGRHLLLTDFGLS 329
+++ L L DFGL+
Sbjct: 285 NIMFTTKRSNELKLIDFGLT 304
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
V GL ++H HL+++P+N++ + RS ++KLID G T + ++ + T E
Sbjct: 264 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV--KVTTGTAE 321
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFK 1073
FAAPEV +P+ TD+WS GVL+Y+LLSG SPF G+++ ET +NV + + F
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 381
Query: 1074 ELTQEATRFL 1083
++++ F+
Sbjct: 382 GISEDGKDFI 391
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APEV +P+ TD+WS GVL+Y+LLSG SPF G+++ ET +NV + + F +
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 383
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPS 1236
+++ F+ + P R T+ + E+ WL P
Sbjct: 384 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 417
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + + + +E + Y+RQ+ GL +MH + HL L P +++ L
Sbjct: 238 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK 297
Query: 523 LTDFGLS 529
L DFGL+
Sbjct: 298 LIDFGLT 304
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQ-VNTEF 644
P+E + D Y E+ G F VV + E+A N AAK H++ + V E
Sbjct: 147 PVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNF-AAKFVMTPHESDKETVRKEI 205
Query: 645 DNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVAT 701
+ LRH + +L +A++ N V++ E + G ++ ++ H ++ A
Sbjct: 206 QTMSVLRHPTLVNLHDAFE----DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 258
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 49 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMT 92
V+ + + D YD +ELG G G+V+ ER++G N+AAK VMT
Sbjct: 148 VEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 192
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L+ E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 4 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 170
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 179 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 236
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 97 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 155
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 156 IKIIDFGLAHKI-DFG 170
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 4 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63
Query: 112 YS 113
S
Sbjct: 64 VS 65
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 69 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 4 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 170
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 179 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 236
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 97 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 155
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 156 IKIIDFGLAHKI-DFG 170
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 4 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63
Query: 112 YS 113
S
Sbjct: 64 VS 65
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 69 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ GKF+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 93/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP F APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--AFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAM 556
+ + DFGL+ +I ++GN + TPA
Sbjct: 157 IKIIDFGLAHKI---------DFGNEFKNIFGTPAF 183
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQLC 238
+D YD +ELG+G +V V +++G +AAK++ K + K E I +L
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+VRLHDS + + ++ +L GGEL + + +Y+E D +H I+Q+L + Y H
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
I H L P +LL+A G + L DFGL+ +
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 157
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + Y H G+ H N++P+N+++AS + VKL D G V
Sbjct: 107 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 166
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
TP + +PEVL ++P D+W+ GV+ Y+LL G PF
Sbjct: 167 AGTPG--YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + +Y+E D +H I+Q+L + Y H I H L P +LL+A G +
Sbjct: 88 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 147
Query: 523 LTDFGLSRRI 532
L DFGL+ +
Sbjct: 148 LADFGLAIEV 157
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL ++P D+W+ GV+ Y+LL G PF + + + Y + + +
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 233
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
T EA + + P KR T ++ + W+ E
Sbjct: 234 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 268
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
+D YD +ELG+G +V V +++G +AAK++ K
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK 41
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQVNTEFDNLRSLR 651
+D Y E+ +G FSVV + K AAK+ + S ++ E R L+
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEF-AAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
H I L + S + LV + + G ++ + +R Y+E + + I Q E
Sbjct: 63 HPNIVRLHD----SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 115
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQLC 238
+D YD +ELG+G +V V +++G +AAK++ K + K E I +L
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+VRLHDS + + ++ +L GGEL + + +Y+E D +H I+Q+L + Y H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
I H L P +LL+A G + L DFGL+ +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + Y H G+ H N++P+N+++AS + VKL D G V
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
TP + +PEVL ++P D+W+ GV+ Y+LL G PF
Sbjct: 168 AGTPG--YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + +Y+E D +H I+Q+L + Y H I H L P +LL+A G +
Sbjct: 89 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 148
Query: 523 LTDFGLSRRI 532
L DFGL+ +
Sbjct: 149 LADFGLAIEV 158
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL ++P D+W+ GV+ Y+LL G PF + + + Y + + +
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
T EA + + P KR T ++ + W+ E
Sbjct: 235 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 269
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
+D YD +ELG+G +V V +++G +AAK++ K
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK 42
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQVNTEFDNLRSLR 651
+D Y E+ +G FSVV + K AAK+ + S ++ E R L+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEF-AAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
H I L + S + LV + + G ++ + +R Y+E + + I Q E
Sbjct: 64 HPNIVRLHD----SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 116
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQLC 238
+D YD +ELG+G +V V +++G +AAK++ K + K E I +L
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+VRLHDS + + ++ +L GGEL + + +Y+E D +H I+Q+L + Y H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
I H L P +LL+A G + L DFGL+ +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + Y H G+ H N++P+N+++AS + VKL D G V
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
TP + +PEVL ++P D+W+ GV+ Y+LL G PF
Sbjct: 168 AGTPG--YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + +Y+E D +H I+Q+L + Y H I H L P +LL+A G +
Sbjct: 89 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 148
Query: 523 LTDFGLSRRI 532
L DFGL+ +
Sbjct: 149 LADFGLAIEV 158
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL ++P D+W+ GV+ Y+LL G PF + + + Y + + +
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
T EA + + P KR T ++ + W+ E
Sbjct: 235 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 269
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
+D YD +ELG+G +V V +++G +AAK++ K
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK 42
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQVNTEFDNLRSLR 651
+D Y E+ +G FSVV + K AAK+ + S ++ E R L+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEF-AAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
H I L + S + LV + + G ++ + +R Y+E + + I Q E
Sbjct: 64 HPNIVRLHD----SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 116
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ A F+ + + P KR T+++ ++ W+ P +
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
+ A F+ + + P KR T+++ ++ W+ P
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
+ A F+ + + P KR T+++ ++ W+ P
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQLC 238
+D YD +ELG+G +V V +++G +AAK++ K + K E I +L
Sbjct: 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+VRLHDS + + ++ +L GGEL + + +Y+E D +H I+Q+L + Y H
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
I H L P +LL+A G + L DFGL+
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + Y H G+ H N++P+N+++AS + VKL D G V
Sbjct: 131 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
TP + +PEVL ++P D+W+ GV+ Y+LL G PF
Sbjct: 191 AGTPG--YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + +Y+E D +H I+Q+L + Y H I H L P +LL+A G +
Sbjct: 112 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 171
Query: 523 LTDFGLS 529
L DFGL+
Sbjct: 172 LADFGLA 178
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL ++P D+W+ GV+ Y+LL G PF + + + Y + + +
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 257
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
T EA + + P KR T ++ + W+ E
Sbjct: 258 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 292
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
+D YD +ELG+G +V V +++G +AAK++ K
Sbjct: 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK 65
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQVNTEFDNLRSLR 651
+D Y E+ +G FSVV + K T AAK+ + S ++ E R L+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
H I L + S + LV + + G ++ + +R Y+E + + I Q E
Sbjct: 87 HPNIVRLHD----SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 139
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
+G+ Y+H L IAH L P ++++ P R + + DFGL+ +I FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ +L+G+ YLH + H +++P+N+++ +V ++K+ID G ++ +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
TP EF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE
Sbjct: 180 TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
F + A F+ L+ K +T+ +++ H + KD ++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 1137 LFKTKE-QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1195
+F T E APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y F
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 1196 E-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
E F + A F+ + + P KR T+++ ++ W+ P +
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRH 520
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ P R
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR- 156
Query: 521 LLLTDFGLSRRITSFG 536
+ + DFGL+ +I FG
Sbjct: 157 IKIIDFGLAHKI-DFG 171
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 112 YS 113
S
Sbjct: 65 VS 66
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
D Y E+ G+F+VV K EK+ T AAK + + + E L+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H + +L E Y+ T +L++E + G ++ +L+ + TE+ + Q
Sbjct: 70 EIQHPNVITLHEVYENKTDV----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 2/158 (1%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDI 233
K + + I ++F + LG G V A E+++G+ +A K + K + K S +NE+ +
Sbjct: 14 KKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAV 73
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
+ ++ H N+V L D YE+ + ++ +L GGEL + + +YTE D + IRQ+L +
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAV 133
Query: 294 DYMHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
Y+HR+ I H L P +LL + ++++DFGLS+
Sbjct: 134 YYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 945 THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
T KDA + VLD + YLH G+ H +++P+N++ S ++ + D G ++ K
Sbjct: 118 TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
+ TP + APEVLA++P D WS GV+AY+LL G PF +++ + + +
Sbjct: 178 VMSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL 235
Query: 1063 FVRYRFE 1069
Y F+
Sbjct: 236 KAEYEFD 242
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVLA++P D WS GV+AY+LL G PF +++ + + + Y F+ + ++
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
+ A F+ + ++ P KR T E+ + W+
Sbjct: 250 SDSAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLL-VAHPGGRHLL 522
GGEL + + +YTE D + IRQ+L + Y+HR+ I H L P +LL + ++
Sbjct: 104 GGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIM 163
Query: 523 LTDFGLSR 530
++DFGLS+
Sbjct: 164 ISDFGLSK 171
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 598 YQFISEIHRGKFSVVVKAAEKANTENLVAAKLF--EYSHDTLHQVNTEFDNLRSLRHERI 655
++F + G FS VV A EKA T L A K + + E LR ++HE I
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKA-TGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENI 82
Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+L + Y+ + N LVM+ + G ++ + + YTE++ +T+I Q
Sbjct: 83 VALEDIYE----SPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ 128
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
+TD Y +ELG+G +V ++ +G+ YAAK++ K + + E I L
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+VRLHDS + ++ +L GGEL + + YY+E D +H I+Q+L +++ H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
I H L P +LL+A G + L DFGL+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + + H G+ H +++P+N+++AS + VKL D G V
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
P + +PEVL ++P D+W+ GV+ Y+LL G PF + + Q + Y
Sbjct: 166 F-AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 1068 F 1068
F
Sbjct: 225 F 225
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 411 MIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPN--RGPDVKTWEDNVPNRG------ 462
M P G ++ + K L +RD + ++ E + + P++ D++ G
Sbjct: 24 MKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLHDSISEEGFHYLVF 82
Query: 463 ---PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-G 518
GGEL + + YY+E D +H I+Q+L +++ H I H L P +LL+A G
Sbjct: 83 DLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKG 142
Query: 519 RHLLLTDFGLS 529
+ L DFGL+
Sbjct: 143 AAVKLADFGLA 153
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL ++P D+W+ GV+ Y+LL G PF + + Q + Y F + +
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
T EA + + P KR T E ++ W+
Sbjct: 234 TPEAKDLINKMLTINPAKRITASEALKHPWIC 265
Score = 37.4 bits (85), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQVNTEFDNLRSLR 651
TD+YQ E+ +G FSVV + K T AAK+ + S ++ E R L+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCM-KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
H I L + S + LV + + G ++ + +R Y+E + + I Q E
Sbjct: 62 HPNIVRLHD----SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
+TD Y +ELG+G +V ++ +G+ YAAK++ K
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTK 40
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 83/134 (61%), Gaps = 4/134 (2%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHPINT 1010
+ +L+G+ YLH + HL+++P N++++S+ + +K++D G ++++ L + T
Sbjct: 137 IKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGT 196
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-E 1069
P E+ APE+L +PI TD+W+ G++AY+LL+ SPF G+ ET N++ V + E
Sbjct: 197 P--EYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE 254
Query: 1070 YLFKELTQEATRFL 1083
F ++Q AT F+
Sbjct: 255 ETFSSVSQLATDFI 268
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMN--QLCHRNLVRL 245
ELGRG +V + +S+G+ YAAK + + G ++ +E+ ++ + C R ++ L
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR-VINL 94
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
H+ YE +I E A GGE+ + +E D+ I+Q+L G+ Y+H+ +I H
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVH 154
Query: 304 LGLTPGDLLVA--HPGGRHLLLTDFGLSRRI 332
L L P ++L++ +P G + + DFG+SR+I
Sbjct: 155 LDLKPQNILLSSIYPLG-DIKIVDFGMSRKI 184
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APE+L +PI TD+W+ G++AY+LL+ SPF G+ ET N++ V + E F +
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV 260
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+Q AT F+ + + P KRPT E C + WL
Sbjct: 261 SQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 33/187 (17%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA--HPGGRHLLLTDFGLSRRITSF 535
+E D+ I+Q+L G+ Y+H+ +I HL L P ++L++ +P G + + DFG+SR+I
Sbjct: 129 SENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLG-DIKIVDFGMSRKIGHA 187
Query: 536 GKLNPLEYGNGQYKVAVTPAMKHLQAITEA--------------GHT-PTLAQDPPPLNY 580
+L + G +Y + P + + IT A HT P + +D
Sbjct: 188 CELREI-MGTPEY---LAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL 243
Query: 581 SVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQV 640
++ +++S E + Q ++ + S++VK EK T + SH L Q
Sbjct: 244 NISQVNVDYSEETFSSVSQLATDFIQ---SLLVKNPEKRPTAEIC------LSHSWLQQ- 293
Query: 641 NTEFDNL 647
+F+NL
Sbjct: 294 -WDFENL 299
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
+TD Y +++G+G +V V+ +G YAAK++ K + + E I L
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+VRLHDS + ++ +L GGEL + + YY+E D +H I+Q+L + + H+
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
+ + H L P +LL+A G + L DFGL+
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + + H G+ H +++P+N+++AS + VKL D G V
Sbjct: 106 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
P + +PEVL +E D+W+ GV+ Y+LL G PF + + + Q + Y
Sbjct: 166 F-AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
Query: 1068 F 1068
F
Sbjct: 225 F 225
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + YY+E D +H I+Q+L + + H++ + H L P +LL+A G +
Sbjct: 87 GGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVK 146
Query: 523 LTDFGLS 529
L DFGL+
Sbjct: 147 LADFGLA 153
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL +E D+W+ GV+ Y+LL G PF + + + Q + Y F + +
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV 233
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
T EA + + P KR T E ++ W+
Sbjct: 234 TPEAKNLINQMLTINPAKRITAHEALKHPWVC 265
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQVNTEFDNLRSLR 651
TD+YQ +I +G FSVV + K T + AAK+ + S ++ E R L+
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCV-KLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYL 711
H I L + S + LV + + G ++ + +R Y+E + + I Q E L
Sbjct: 62 HSNIVRLHD----SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 117
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
+TD Y +++G+G +V V+ +G YAAK++ K
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTK 40
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
TD Y +ELG+G +V V+++ + YAAK++ K + + E I L
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLK 88
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+VRLHDS + ++ +L GGEL + + YY+E D +H I Q+L ++++H+
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
I H L P +LL+A G + L DFGL+
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + ++H + H +++P+N+++AS + VKL D G V
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
P + +PEVL ++P D+W+ GV+ Y+LL G PF + + + Q + Y
Sbjct: 193 F-AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 251
Query: 1068 F 1068
F
Sbjct: 252 F 252
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + YY+E D +H I Q+L ++++H+ I H L P +LL+A G +
Sbjct: 114 GGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVK 173
Query: 523 LTDFGLS 529
L DFGL+
Sbjct: 174 LADFGLA 180
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL ++P D+W+ GV+ Y+LL G PF + + + Q + Y F + +
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV 260
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
T EA + + P KR T ++ ++ W+
Sbjct: 261 TPEAKNLINQMLTINPAKRITADQALKHPWVC 292
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVA-----AKLFEYSHDTLHQVNTEFDNLRS 649
TD YQ E+ +G FSVV + +K T+ A KL H L + E R
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER---EARICRL 86
Query: 650 LRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
L+H I L + S + LV + + G ++ + +R Y+E + + I Q E
Sbjct: 87 LKHPNIVRLHD----SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILE 141
Score = 33.5 bits (75), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
TD Y +ELG+G +V V+++ + YAAK++ K
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTK 67
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
+TD Y +ELG+G +V ++ +G+ YAAK++ K + + E I L
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+VRLHDS + ++ +L GGEL + + YY+E D +H I+Q+L +++ H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
I H L P +LL+A G + L DFGL+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + + H G+ H +++P+N+++AS + VKL D G V
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
P + +PEVL ++P D+W+ GV+ Y+LL G PF + + Q + Y
Sbjct: 166 F-AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 1068 F 1068
F
Sbjct: 225 F 225
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 411 MIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPN--RGPDVKTWEDNVPNRG------ 462
M P G ++ + K L +RD + ++ E + + P++ D++ G
Sbjct: 24 MKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLHDSISEEGFHYLVF 82
Query: 463 ---PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-G 518
GGEL + + YY+E D +H I+Q+L +++ H I H L P +LL+A G
Sbjct: 83 DLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKG 142
Query: 519 RHLLLTDFGLS 529
+ L DFGL+
Sbjct: 143 AAVKLADFGLA 153
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL ++P D+W+ GV+ Y+LL G PF + + Q + Y F + +
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
T EA + + P KR T E ++ W+
Sbjct: 234 TPEAKDLINKMLTINPAKRITASEALKHPWIC 265
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQVNTEFDNLRSLR 651
TD+YQ E+ +G FSVV + K T AAK+ + S ++ E R L+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCM-KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
H I L + S + LV + + G ++ + +R Y+E + + I Q E
Sbjct: 62 HPNIVRLHD----SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
+TD Y +ELG+G +V ++ +G+ YAAK++ K
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTK 40
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ 236
+T I + F + LG G V+ +R +G+ +A K + S +NE+ ++ +
Sbjct: 3 QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK 62
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
+ H N+V L D YE+ + ++ +L GGEL + + YTE D + I+Q+LS + Y+
Sbjct: 63 IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 297 HRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLSR 330
H I H L P +LL P +++TDFGLS+
Sbjct: 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 945 THKDAYCVTS-VLDGLQYLHWRGLCHLNIEPDNVV-MASVRSVQVKLIDLGCTQRVTKLG 1002
T KDA V VL ++YLH G+ H +++P+N++ + + ++ + D G + ++ + G
Sbjct: 104 TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS-KMEQNG 162
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
+ TP + APEVLA++P D WS GV+ Y+LL G PF ++E + + +
Sbjct: 163 IMSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIK 220
Query: 1063 FVRYRFEYLF-KELTQEATRFL 1083
Y FE F ++++ A F+
Sbjct: 221 EGYYEFESPFWDDISESAKDFI 242
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KEL 1202
APEVLA++P D WS GV+ Y+LL G PF ++E + + + Y FE F ++
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ A F+ + ++ P +R T E+ + W+
Sbjct: 235 SESAKDFICHLLEKDPNERYTCEKALSHPWI 265
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLL 522
GGEL + + YTE D + I+Q+LS + Y+H I H L P +LL P ++
Sbjct: 90 GGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIM 149
Query: 523 LTDFGLSR 530
+TDFGLS+
Sbjct: 150 ITDFGLSK 157
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 598 YQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNLRSLRHER 654
+ F+ + G FS V ++ T L A K + S D+ + E L+ ++HE
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDS--SLENEIAVLKKIKHEN 67
Query: 655 IASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQA 706
I +L + Y+ +T LVM+ + G ++ + R YTE++ + +I Q
Sbjct: 68 IVTLEDIYESTTHY----YLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
T+ Y +ELG+G +V V+ +G+ YAA ++ K + + E I L
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+VRLHDS + +I +L GGEL + + YY+E D +H I+Q+L + + H+
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 299 LSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLS 329
+ + H L P +LL+A G + L DFGL+
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + + H G+ H N++P+N+++AS ++ VKL D G V
Sbjct: 113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
P + +PEVL ++P D+W+ GV+ Y+LL G PF + + Q + Y
Sbjct: 173 F-AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 1068 F 1068
F
Sbjct: 232 F 232
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLL 522
GGEL + + YY+E D +H I+Q+L + + H++ + H L P +LL+A G +
Sbjct: 94 GGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVK 153
Query: 523 LTDFGLS 529
L DFGL+
Sbjct: 154 LADFGLA 160
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL ++P D+W+ GV+ Y+LL G PF + + Q + Y F + +
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 240
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
T EA + + P KR T E ++ W+
Sbjct: 241 TPEAKDLINKMLTINPSKRITAAEALKHPWI 271
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 12/122 (9%)
Query: 595 TDKYQFISEIHRGKFSVV-----VKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRS 649
T++YQ E+ +G FSVV V A ++ + KL H L + E R
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRL 66
Query: 650 LRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEH 709
L+H I L + S + L+ + + G ++ + +R Y+E + + I Q E
Sbjct: 67 LKHPNIVRLHD----SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 710 YL 711
L
Sbjct: 123 VL 124
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
T+ Y +ELG+G +V V+ +G+ YAA ++ K
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTK 47
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFK 228
G + T Y +ELG+G +V V+ +G+ YAAK++ K + +
Sbjct: 10 GVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE 69
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
E I L H N+VRLHDS + +I +L GGEL + + YY+E D +H I+Q
Sbjct: 70 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ 129
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLS 329
+L + + H++ + H L P +LL+A G + L DFGL+
Sbjct: 130 ILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
++C+ +L+ + + H G+ H +++P+N+++AS ++ VKL D G V
Sbjct: 124 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 183
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
P + +PEVL ++P D+W+ GV+ Y+LL G PF + + Q + Y
Sbjct: 184 F-AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 242
Query: 1068 F 1068
F
Sbjct: 243 F 243
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLL 522
GGEL + + YY+E D +H I+Q+L + + H++ + H L P +LL+A G +
Sbjct: 105 GGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVK 164
Query: 523 LTDFGLS 529
L DFGL+
Sbjct: 165 LADFGLA 171
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+PEVL ++P D+W+ GV+ Y+LL G PF + + Q + Y F + +
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 251
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
T EA + + P KR T E ++ W+
Sbjct: 252 TPEAKDLINKMLTINPSKRITAAEALKHPWI 282
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 598 YQFISEIHRGKFSVV-----VKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRH 652
YQ E+ +G FSVV V A ++ + + KL H L + E R L+H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER---EARICRLLKH 80
Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYL 711
I L + S + L+ + + G ++ + +R Y+E + + I Q E L
Sbjct: 81 PNIVRLHD----SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 135
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 46 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
G + T Y +ELG+G +V V+ +G+ YAAK++ K
Sbjct: 10 GVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTK 58
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC 238
K + + Y ++LGRG GIV+ VE SS + Y AK + KG + L K E+ I+N
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIAR 59
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMH 297
HRN++ LH+S+E+ + +I E G ++ + ++ E +I Y+ Q+ L ++H
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+I H + P +++ + + +FG +R++
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V + LQ+LH + H +I P+N++ + RS +K+I+ G R K G + T
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG-QARQLKPGDNFRLLFTA 166
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EY 1070
PE+ APEV + + TD+WS G L YVLLSG +PF ++ + +N+ Y F E
Sbjct: 167 -PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEE 225
Query: 1071 LFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFR 1119
FKE++ EA F+ L+ K +T + + H W + ++R + R
Sbjct: 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQHP-WLKQKIERVSTKVIR 274
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
APEV + + TD+WS G L YVLLSG +PF ++ + +N+ Y F E FKE+
Sbjct: 171 APEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI 230
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ EA F+ + + R T E ++ WL
Sbjct: 231 SIEAMDFVDRLLVKERKSRMTASEALQHPWL 261
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGT 96
K + + Y ++LGRG GIV+ VE SS + Y AK + KGT
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT 43
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERI 655
+KY ++ RG+F +V + E ++ + + AK + V E L RH I
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYM-AKFVKVKGTDQVLVKKEISILNIARHRNI 63
Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYL-SSRHEYTEQNVATIISQAWE 708
L E+++ V++ E + G D+ + +S E E+ + + + Q E
Sbjct: 64 LHLHESFESMEE----LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCE 113
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/136 (17%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 401 LNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWED-NVPNRGPDVKTWEDNVP 459
++ C S+ Y +F D+VLV +++ + N+ + ++ E+ V
Sbjct: 21 VHRCVETSSKKTYMA--KFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78
Query: 460 --NRGPGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 516
G ++ + ++ E +I Y+ Q+ L ++H +I H + P +++
Sbjct: 79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR 138
Query: 517 GGRHLLLTDFGLSRRI 532
+ + +FG +R++
Sbjct: 139 RSSTIKIIEFGQARQL 154
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDIMN 235
+ + I D YDF D LG G V A ++ + + A K + K + K +NE+ +++
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLH 71
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
++ H N+V L D YE+ +I +L GGEL + + +YTE D + I Q+L + Y
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 296 MHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
+H L I H L P +LL + ++++DFGLS+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 945 THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
T +DA + VLD ++YLH G+ H +++P+N++ S+ ++ + D G ++
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
L TP + APEVLA++P D WS GV+AY+LL G PF +++ + + +
Sbjct: 174 VLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
Query: 1063 FVRYRFEY-LFKELTQEATRFL 1083
Y F+ + +++ A F+
Sbjct: 232 KAEYEFDSPYWDDISDSAKDFI 253
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGI-----PSALFKTKEQ-----APEVLAEEPIFPQT 1157
+DLK E + L + I S+ G+ P ++ T APEVLA++P
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFKR 1216
D WS GV+AY+LL G PF +++ + + + Y F+ + +++ A F+ + ++
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 1217 APGKRPTVEECHENRWLVPSEYMIKKRERAV 1247
P KR T E+ ++ W+ + K ++V
Sbjct: 260 DPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLL-VAHPGGRHLL 522
GGEL + + +YTE D + I Q+L + Y+H L I H L P +LL + ++
Sbjct: 100 GGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 523 LTDFGLSR 530
++DFGLS+
Sbjct: 160 ISDFGLSK 167
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDN----LRSLR 651
D Y F + G FS V+ A +K T+ LVA K + L +N L ++
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDK-RTQKLVAIKCI--AKKALEGKEGSMENEIAVLHKIK 74
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
H I +L + Y+ + L+M+ + G ++ + + YTE++ + +I Q
Sbjct: 75 HPNIVALDDIYE----SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 6/174 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
G V+ T +D Y LG+G G V ++ +G+ A KV++ + + K SL
Sbjct: 20 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 79
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
+ E+ ++ QL H N+++L++ +E K F ++ E+ GGEL + + ++E D A I
Sbjct: 80 LR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 138
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRITSFGKLN 339
RQ+LSG+ YMH+ I H L P +LL+ + ++ + DFGLS + K+
Sbjct: 139 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 192
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G+ Y+H + H +++P+N+++ S + +++ID G + +
Sbjct: 135 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
I T + APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y
Sbjct: 195 IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 251
Query: 1068 FEY-LFKELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
FE +K++++ A + ML + + I+ + +DHE+
Sbjct: 252 FELPQWKKVSESAKDLIRKMLTYVPSMR-ISARDALDHEW 290
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + + ++E D A IRQ+LSG+ YMH+ I H L P +LL+ + ++
Sbjct: 116 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIR 175
Query: 523 LTDFGLSRRITSFGKLN 539
+ DFGLS + K+
Sbjct: 176 IIDFGLSTHFEASKKMK 192
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y FE +K++
Sbjct: 202 APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 260
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ A + + P R + + ++ W+
Sbjct: 261 SESAKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
G V+ T +D Y LG+G G V ++ +G+ A KV++ + + K SL
Sbjct: 14 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
+ E+ ++ QL H N+++L++ +E K F ++ E+ GGEL + + ++E D A I
Sbjct: 74 LR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 132
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRITSFGKL 338
RQ+LSG+ YMH+ I H L P +LL+ + ++ + DFGLS + K+
Sbjct: 133 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G+ Y+H + H +++P+N+++ S + +++ID G + +
Sbjct: 129 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
I T + APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y
Sbjct: 189 IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 1068 FEY-LFKELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
FE +K++++ A + ML + + I+ + +DHE+
Sbjct: 246 FELPQWKKVSESAKDLIRKMLTYVPSM-RISARDALDHEW 284
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 150/383 (39%), Gaps = 79/383 (20%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + + ++E D A IRQ+LSG+ YMH+ I H L P +LL+ + ++
Sbjct: 110 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIR 169
Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPT------LAQDPP 576
+ DFGLS + K+ + G Y + P + H + T L P
Sbjct: 170 IIDFGLSTHFEASKKMKD-KIGTAYY---IAPEVLHGTYDEKCDVWSTGVILYILLSGCP 225
Query: 577 PLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT 636
P N ++Y + ++ +GK++ + +K + E + D
Sbjct: 226 PFN--------------GANEYDILKKVEKGKYTFELPQWKKVS----------ESAKDL 261
Query: 637 LHQVNTEFDNLR-----SLRHERIASLL-EAYKPSTTASNIAVLVMEKLQGADVLS---- 686
+ ++ T ++R +L HE I + E + + A+L + + QG L+
Sbjct: 262 IRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAAL 321
Query: 687 -YLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLR 745
Y+ S+ T Q+ ++ + H + KN + D++ + +E A++
Sbjct: 322 LYMGSK--LTSQDETKELTAIF-HKMDKNGD---GQLDRAELIEGYKELMRMKGQDASML 375
Query: 746 DVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRP 805
D E V A+D+D +NG Y E++ VA R
Sbjct: 376 DASAVEHEVDQVLDAVDFD----------KNGYIEY-------------SEFVTVAMDRK 412
Query: 806 DL----RLSTGFNCLDTSENGHL 824
L RL F D+ +G +
Sbjct: 413 TLLSRERLERAFRMFDSDNSGKI 435
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y FE +K++
Sbjct: 196 APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 254
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ A + + P R + + ++ W+
Sbjct: 255 SESAKDLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDIMN 235
+ + I D YDF D LG G V A ++ + + A K + + + K +NE+ +++
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
++ H N+V L D YE+ +I +L GGEL + + +YTE D + I Q+L + Y
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 296 MHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
+H L I H L P +LL + ++++DFGLS+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 945 THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
T +DA + VLD ++YLH G+ H +++P+N++ S+ ++ + D G ++
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
L TP + APEVLA++P D WS GV+AY+LL G PF +++ + + +
Sbjct: 174 VLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
Query: 1063 FVRYRFE 1069
Y F+
Sbjct: 232 KAEYEFD 238
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGI-----PSALFKTKEQ-----APEVLAEEPIFPQT 1157
+DLK E + L + I S+ G+ P ++ T APEVLA++P
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFKR 1216
D WS GV+AY+LL G PF +++ + + + Y F+ + +++ A F+ + ++
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 1217 APGKRPTVEECHENRWLVPSEYMIKKRERAV 1247
P KR T E+ ++ W+ + K ++V
Sbjct: 260 DPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLL-VAHPGGRHLL 522
GGEL + + +YTE D + I Q+L + Y+H L I H L P +LL + ++
Sbjct: 100 GGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 523 LTDFGLSR 530
++DFGLS+
Sbjct: 160 ISDFGLSK 167
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Query: 591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF--EYSHDTLHQVNTEFDNLR 648
E D Y F + G FS V+ A +K T+ LVA K E + E L
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDK-RTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H I +L + Y+ + L+M+ + G ++ + + YTE++ + +I Q
Sbjct: 72 KIKHPNIVALDDIYE----SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDIMN 235
+ + I D YDF D LG G V A ++ + + A K + + + K +NE+ +++
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
++ H N+V L D YE+ +I +L GGEL + + +YTE D + I Q+L + Y
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 296 MHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
+H L I H L P +LL + ++++DFGLS+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 945 THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
T +DA + VLD ++YLH G+ H +++P+N++ S+ ++ + D G ++
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
L TP + APEVLA++P D WS GV+AY+LL G PF +++ + + +
Sbjct: 174 VLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
Query: 1063 FVRYRFE 1069
Y F+
Sbjct: 232 KAEYEFD 238
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGI-----PSALFKTKEQ-----APEVLAEEPIFPQT 1157
+DLK E + L + I S+ G+ P ++ T APEVLA++P
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFKR 1216
D WS GV+AY+LL G PF +++ + + + Y F+ + +++ A F+ + ++
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 1217 APGKRPTVEECHENRWLVPSEYMIKKRERAV 1247
P KR T E+ ++ W+ + K ++V
Sbjct: 260 DPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLL-VAHPGGRHLL 522
GGEL + + +YTE D + I Q+L + Y+H L I H L P +LL + ++
Sbjct: 100 GGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 523 LTDFGLSR 530
++DFGLS+
Sbjct: 160 ISDFGLSK 167
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Query: 591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF--EYSHDTLHQVNTEFDNLR 648
E D Y F + G FS V+ A +K T+ LVA K E + E L
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDK-RTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++H I +L + Y+ + L+M+ + G ++ + + YTE++ + +I Q
Sbjct: 72 KIKHPNIVALDDIYE----SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
G V+ T +D Y LG+G G V ++ +G+ A KV++ + + K SL
Sbjct: 37 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 96
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
+ E+ ++ QL H N+++L++ +E K F ++ E+ GGEL + + ++E D A I
Sbjct: 97 LR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 155
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRITSFGKL 338
RQ+LSG+ YMH+ I H L P +LL+ + ++ + DFGLS + K+
Sbjct: 156 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G+ Y+H + H +++P+N+++ S + +++ID G + +
Sbjct: 152 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 211
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
I T + APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y
Sbjct: 212 IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 268
Query: 1068 FEY-LFKELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
FE +K++++ A + ML + + I+ + +DHE+
Sbjct: 269 FELPQWKKVSESAKDLIRKMLTYVPSM-RISARDALDHEW 307
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 150/383 (39%), Gaps = 79/383 (20%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + + ++E D A IRQ+LSG+ YMH+ I H L P +LL+ + ++
Sbjct: 133 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIR 192
Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPT------LAQDPP 576
+ DFGLS + K+ + G Y + P + H + T L P
Sbjct: 193 IIDFGLSTHFEASKKMKD-KIGTAYY---IAPEVLHGTYDEKCDVWSTGVILYILLSGCP 248
Query: 577 PLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT 636
P N ++Y + ++ +GK++ + +K + E + D
Sbjct: 249 PFN--------------GANEYDILKKVEKGKYTFELPQWKKVS----------ESAKDL 284
Query: 637 LHQVNTEFDNLR-----SLRHERIASLL-EAYKPSTTASNIAVLVMEKLQGADVLS---- 686
+ ++ T ++R +L HE I + E + + A+L + + QG L+
Sbjct: 285 IRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAAL 344
Query: 687 -YLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLR 745
Y+ S+ T Q+ ++ + H + KN + D++ + +E A++
Sbjct: 345 LYMGSK--LTSQDETKELTAIF-HKMDKNGD---GQLDRAELIEGYKELMRMKGQDASML 398
Query: 746 DVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRP 805
D E V A+D+D +NG Y E++ VA R
Sbjct: 399 DASAVEHEVDQVLDAVDFD----------KNGYIEY-------------SEFVTVAMDRK 435
Query: 806 DL----RLSTGFNCLDTSENGHL 824
L RL F D+ +G +
Sbjct: 436 TLLSRERLERAFRMFDSDNSGKI 458
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y FE +K++
Sbjct: 219 APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 277
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ A + + P R + + ++ W+
Sbjct: 278 SESAKDLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDIMN 235
+ + I D YDF D LG G V A ++ + + A K + + + K +NE+ +++
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
++ H N+V L D YE+ +I +L GGEL + + +YTE D + I Q+L + Y
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 296 MHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
+H L I H L P +LL + ++++DFGLS+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 945 THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
T +DA + VLD ++YLH G+ H +++P+N++ S+ ++ + D G ++
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
L TP + APEVLA++P D WS GV+AY+LL G PF +++ + + +
Sbjct: 174 VLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
Query: 1063 FVRYRFE 1069
Y F+
Sbjct: 232 KAEYEFD 238
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGI-----PSALFKTKEQ-----APEVLAEEPIFPQT 1157
+DLK E + L + I S+ G+ P ++ T APEVLA++P
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFKR 1216
D WS GV+AY+LL G PF +++ + + + Y F+ + +++ A F+ + ++
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 1217 APGKRPTVEECHENRWLVPSEYMIKKRERAV 1247
P KR T E+ ++ W+ + K ++V
Sbjct: 260 DPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLL-VAHPGGRHLL 522
GGEL + + +YTE D + I Q+L + Y+H L I H L P +LL + ++
Sbjct: 100 GGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 523 LTDFGLSR 530
++DFGLS+
Sbjct: 160 ISDFGLSK 167
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF--EYSHDTLHQVNTEFDNLRSLRHE 653
D Y F + G FS V+ A +K T+ LVA K E + E L ++H
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDK-RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 654 RIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQA 706
I +L + Y+ + L+M+ + G ++ + + YTE++ + +I Q
Sbjct: 77 NIVALDDIYE----SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
G V+ T +D Y LG+G G V ++ +G+ A KV++ + + K SL
Sbjct: 38 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 97
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
+ E+ ++ QL H N+++L++ +E K F ++ E+ GGEL + + ++E D A I
Sbjct: 98 LR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 156
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRITSFGKL 338
RQ+LSG+ YMH+ I H L P +LL+ + ++ + DFGLS + K+
Sbjct: 157 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G+ Y+H + H +++P+N+++ S + +++ID G + +
Sbjct: 153 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 212
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
I T + APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y
Sbjct: 213 IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 269
Query: 1068 FEY-LFKELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
FE +K++++ A + ML + + I+ + +DHE+
Sbjct: 270 FELPQWKKVSESAKDLIRKMLTYVPSM-RISARDALDHEW 308
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 150/383 (39%), Gaps = 79/383 (20%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + + ++E D A IRQ+LSG+ YMH+ I H L P +LL+ + ++
Sbjct: 134 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIR 193
Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPT------LAQDPP 576
+ DFGLS + K+ + G Y + P + H + T L P
Sbjct: 194 IIDFGLSTHFEASKKMKD-KIGTAYY---IAPEVLHGTYDEKCDVWSTGVILYILLSGCP 249
Query: 577 PLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT 636
P N ++Y + ++ +GK++ + +K + E + D
Sbjct: 250 PFN--------------GANEYDILKKVEKGKYTFELPQWKKVS----------ESAKDL 285
Query: 637 LHQVNTEFDNLR-----SLRHERIASLL-EAYKPSTTASNIAVLVMEKLQGADVLS---- 686
+ ++ T ++R +L HE I + E + + A+L + + QG L+
Sbjct: 286 IRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAAL 345
Query: 687 -YLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLR 745
Y+ S+ T Q+ ++ + H + KN + D++ + +E A++
Sbjct: 346 LYMGSK--LTSQDETKELTAIF-HKMDKNGD---GQLDRAELIEGYKELMRMKGQDASML 399
Query: 746 DVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRP 805
D E V A+D+D +NG Y E++ VA R
Sbjct: 400 DASAVEHEVDQVLDAVDFD----------KNGYIEY-------------SEFVTVAMDRK 436
Query: 806 DL----RLSTGFNCLDTSENGHL 824
L RL F D+ +G +
Sbjct: 437 TLLSRERLERAFRMFDSDNSGKI 459
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y FE +K++
Sbjct: 220 APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 278
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ A + + P R + + ++ W+
Sbjct: 279 SESAKDLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
LG+G G V +R + + YA KV+ N+ S E++++ +L H N+++L +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
E SF I+ EL GGEL + ++ ++E+D A I+Q+ SG+ YMH+ +I H L P
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 309 GDLLV-AHPGGRHLLLTDFGLS 329
++L+ + + + DFGLS
Sbjct: 150 ENILLESKEKDCDIKIIDFGLS 171
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLG---CTQRVT 999
+ H A + V G+ Y+H + H +++P+N+++ S + +K+ID G C Q+ T
Sbjct: 119 SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
K+ I + APEVL + DVWSAGV+ Y+LLSG PF G++E + +
Sbjct: 179 KMKDRI-----GTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
Query: 1060 NVNFVRYRFE 1069
V +Y F+
Sbjct: 233 RVETGKYAFD 242
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + DVWSAGV+ Y+LLSG PF G++E + + V +Y F+ ++ +
Sbjct: 191 APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ +A + + P R T +C E+ W+
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + ++ ++E+D A I+Q+ SG+ YMH+ +I H L P ++L+ + +
Sbjct: 105 GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164
Query: 523 LTDFGLS 529
+ DFGLS
Sbjct: 165 IIDFGLS 171
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
I Y + +GRG G V AV++ + AAK + + FK E++IM L H
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 66
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
N++RL++++E ++ EL GGEL + + + E D A ++ +LS + Y H+L+
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 126
Query: 301 IAHLGLTPGD-LLVAHPGGRHLLLTDFGLSRRI 332
+AH L P + L + L L DFGL+ R
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVV-MASVRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL + Y H + H +++P+N + + +KLID G R K G ++
Sbjct: 109 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMR- 166
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
P + +P+VL E P+ D WSAGV+ YVLL G PF ++ E + +
Sbjct: 167 TKVGTPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT 225
Query: 1068 F-EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDL 1110
F E + ++ +A + L+ K IT ++HE W K L
Sbjct: 226 FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHE-WFEKQL 269
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 452 KTWEDN-----VPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 506
+T+EDN V GGEL + + + E D A ++ +LS + Y H+L++AH L
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDL 132
Query: 507 TPGD-LLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQY 548
P + L + L L DFGL+ R GK+ + G Y
Sbjct: 133 KPENFLFLTDSPDSPLKLIDFGLAARFKP-GKMMRTKVGTPYY 174
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 1108 KDLKRETNYTFRLSAKNV------IGWSEKGIPSALFKTKEQAPEVLAEEPI----FPQT 1157
+DLK E N+ F + + G + + P + +TK P ++ + + P+
Sbjct: 130 RDLKPE-NFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPEC 188
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKR 1216
D WSAGV+ YVLL G PF ++ E + + F E + ++ +A + + +
Sbjct: 189 DEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 248
Query: 1217 APGKRPTVEECHENRWL 1233
+P +R T + E+ W
Sbjct: 249 SPKQRITSLQALEHEWF 265
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNL 242
Y+ LG+G G V +R + + YA KV+ N+ S E++++ +L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
++L + E SF I+ EL GGEL + ++ ++E+D A I+Q+ SG+ YMH+ +I
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 303 HLGLTPGDLLV-AHPGGRHLLLTDFGLS 329
H L P ++L+ + + + DFGLS
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLG---CTQRVT 999
+ H A + V G+ Y+H + H +++P+N+++ S + +K+ID G C Q+ T
Sbjct: 119 SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
K+ I + APEVL + DVWSAGV+ Y+LLSG PF G++E + +
Sbjct: 179 KMKDRI-----GTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
Query: 1060 NVNFVRYRFE 1069
V +Y F+
Sbjct: 233 RVETGKYAFD 242
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + DVWSAGV+ Y+LLSG PF G++E + + V +Y F+ ++ +
Sbjct: 191 APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ +A + + P R T +C E+ W+
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + ++ ++E+D A I+Q+ SG+ YMH+ +I H L P ++L+ + +
Sbjct: 105 GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164
Query: 523 LTDFGLS 529
+ DFGLS
Sbjct: 165 IIDFGLS 171
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNL 242
Y+ LG+G G V +R + + YA KV+ N+ S E++++ +L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
++L + E SF I+ EL GGEL + ++ ++E+D A I+Q+ SG+ YMH+ +I
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 303 HLGLTPGDLLV-AHPGGRHLLLTDFGLS 329
H L P ++L+ + + + DFGLS
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLG---CTQRVT 999
+ H A + V G+ Y+H + H +++P+N+++ S + +K+ID G C Q+ T
Sbjct: 119 SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
K+ I + APEVL + DVWSAGV+ Y+LLSG PF G++E + +
Sbjct: 179 KMKDRI-----GTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
Query: 1060 NVNFVRYRFE 1069
V +Y F+
Sbjct: 233 RVETGKYAFD 242
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + DVWSAGV+ Y+LLSG PF G++E + + V +Y F+ ++ +
Sbjct: 191 APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ +A + + P R T +C E+ W+
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + ++ ++E+D A I+Q+ SG+ YMH+ +I H L P ++L+ + +
Sbjct: 105 GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164
Query: 523 LTDFGLS 529
+ DFGLS
Sbjct: 165 IIDFGLS 171
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
I Y + +GRG G V AV++ + AAK + + FK E++IM L H
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 83
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
N++RL++++E ++ EL GGEL + + + E D A ++ +LS + Y H+L+
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 143
Query: 301 IAHLGLTPGD-LLVAHPGGRHLLLTDFGLSRRI 332
+AH L P + L + L L DFGL+ R
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVV-MASVRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL + Y H + H +++P+N + + +KLID G R K G ++
Sbjct: 126 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMR- 183
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
P + +P+VL E P+ D WSAGV+ YVLL G PF ++ E + +
Sbjct: 184 TKVGTPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT 242
Query: 1068 F-EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDL 1110
F E + ++ +A + L+ K IT ++HE W K L
Sbjct: 243 FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHE-WFEKQL 286
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 452 KTWEDN-----VPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 506
+T+EDN V GGEL + + + E D A ++ +LS + Y H+L++AH L
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDL 149
Query: 507 TPGD-LLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQY 548
P + L + L L DFGL+ R GK+ + G Y
Sbjct: 150 KPENFLFLTDSPDSPLKLIDFGLAARFKP-GKMMRTKVGTPYY 191
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 1108 KDLKRETNYTFRLSAKNV------IGWSEKGIPSALFKTKEQAPEVLAEEPI----FPQT 1157
+DLK E N+ F + + G + + P + +TK P ++ + + P+
Sbjct: 147 RDLKPE-NFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPEC 205
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKR 1216
D WSAGV+ YVLL G PF ++ E + + F E + ++ +A + + +
Sbjct: 206 DEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 265
Query: 1217 APGKRPTVEECHENRWL 1233
+P +R T + E+ W
Sbjct: 266 SPKQRITSLQALEHEWF 282
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 6/164 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
G V+ T +D Y LG+G G V ++ +G+ A KV++ + + K SL
Sbjct: 14 GXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
+ E+ ++ QL H N+ +L++ +E K F ++ E+ GGEL + + ++E D A I
Sbjct: 74 LR-EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 132
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLS 329
RQ+LSG+ Y H+ I H L P +LL+ + ++ + DFGLS
Sbjct: 133 RQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G+ Y H + H +++P+N+++ S + +++ID G +
Sbjct: 129 ARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK 188
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
I T + APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y
Sbjct: 189 IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 1068 FE 1069
FE
Sbjct: 246 FE 247
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y FE +K++
Sbjct: 196 APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 254
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ A + P R + + ++ W+
Sbjct: 255 SESAKDLIRKXLTYVPSXRISARDALDHEWI 285
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + + ++E D A IRQ+LSG+ Y H+ I H L P +LL+ + ++
Sbjct: 110 GGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIR 169
Query: 523 LTDFGLS 529
+ DFGLS
Sbjct: 170 IIDFGLS 176
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTP 1011
+ L YLH +G+CH +I+P+N + ++ +S ++KL+D G ++ KL +
Sbjct: 177 IFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 1012 NPEFAAPEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
P F APEVL E P+ D WSAGVL ++LL GA PF G ++ +T V + FE
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE 296
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 83/206 (40%), Gaps = 52/206 (25%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-------FKNELDIMNQL 237
Y +G+G G+V A+E + A K+M N+ + + K E+ +M +L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNK--NKIRQINPKDVERIKTEVRLMKKL 85
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLT------------------------- 272
H N+ RL++ YE + ++ EL GG LL L
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 273 ------------RQSY---YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG 317
R+S E I++ +RQ+ S L Y+H I H + P + L +
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 318 GRHLLLTDFGLSRRITSFGKLNPLEY 343
+ L DFGLS+ F KLN EY
Sbjct: 206 SFEIKLVDFGLSKE---FYKLNNGEY 228
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 1144 APEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1196
APEVL E P+ D WSAGVL ++LL GA PF G ++ +T V + FE
Sbjct: 242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE 296
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 541
I++ +RQ+ S L Y+H I H + P + L + + L DFGLS+ F KLN
Sbjct: 170 ISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKE---FYKLN-- 224
Query: 542 EYGNGQYKVAVTPA 555
NG+Y T A
Sbjct: 225 ---NGEYYGMTTKA 235
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVY--HAVER-SSGRNYAAKVMTGKGNQYKSLF--KNELDIMNQLCHRNLVRL 245
LG+G G V+ V R SG YA KV+ + + K E DI+ + H +V+L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
H +++T+ +I + GG+L L+++ +TE D+ Y+ +L GLD++H L I +
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRD 155
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
L P ++L+ G H+ LTDFGLS+
Sbjct: 156 LKPENILLDEEG--HIKLTDFGLSK 178
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L L+++ +TE D+ Y+ +L GLD++H L I + L P ++L+ G H+ L
Sbjct: 114 GGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEG--HIKL 171
Query: 524 TDFGLSR 530
TDFGLS+
Sbjct: 172 TDFGLSK 178
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
GL +LH G+ + +++P+N+++ +KL D G ++ + E+ A
Sbjct: 142 GLDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKEAIDHEKKAYSF-CGTVEYMA 198
Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1077
PEV+ + D WS GVL + +L+G+ PF+G+ ET + + L+
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF---LST 255
Query: 1078 EATRFLMLIFK 1088
EA L +FK
Sbjct: 256 EAQSLLRALFK 266
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEV+ + D WS GVL + +L+G+ PF+G+ ET + + L+
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF---LS 254
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L +FKR P R
Sbjct: 255 TEAQSLLRALFKRNPANR 272
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
A + +L G+ YLH + H +I+P+N+++ + S+ +K++D G + +K L
Sbjct: 149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
+ T + APEVL ++ + DVWS GV+ Y+LL G PF GQ++ + + V +Y
Sbjct: 209 LGTA--YYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265
Query: 1068 FEYL-FKELTQEATRFLMLIFKHEVD------------WI-TLANNID 1101
F++ +K ++ EA + L+ ++ + WI ANNI+
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNIN 313
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKG------ 220
G V+ + I ++Y +LG G G V E++ A KV+ KG
Sbjct: 24 GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 221 ---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY 277
++ NE+ ++ L H N+++L D +E K F +++E GGEL + + +
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF 143
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLLLTDFGLS 329
E D A+ ++Q+LSG+ Y+H+ +I H + P ++L+ + ++ + DFGLS
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
APEVL ++ + DVWS GV+ Y+LL G PF GQ++ + + V +Y F++ +K +
Sbjct: 216 APEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNI 274
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG 1250
+ EA + L+ KR T EE +RW+ I K ++ G
Sbjct: 275 SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCG 322
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHL 521
GGEL + + + E D A+ ++Q+LSG+ Y+H+ +I H + P ++L+ + ++
Sbjct: 129 EGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNI 188
Query: 522 LLTDFGLS 529
+ DFGLS
Sbjct: 189 KIVDFGLS 196
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS---LFKNELDIMNQL 237
++D Y +LG G G V ++ +G A K++ S +E+ ++ QL
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
H N+++L++ +E K ++ ++ E+ GGEL + + ++E D A ++Q+LSG Y+H
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLN 339
+ +I H L P +LL+ L+ + DFGLS GK+
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 181
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G YLH + H +++P+N+++ S R +K++D G + G +
Sbjct: 124 AVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 183
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
+ T + APEVL ++ + DVWS GV+ Y+LL G PF GQ++ E + V ++
Sbjct: 184 LGTAY--YIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS 240
Query: 1068 FEYL-FKELTQEATRFLMLIFKHE 1090
F+ + +++ EA + + L+ +E
Sbjct: 241 FDPPDWTQVSDEAKQLVKLMLTYE 264
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
APEVL ++ + DVWS GV+ Y+LL G PF GQ++ E + V ++ F+ + ++
Sbjct: 191 APEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
+ EA + + L+ P KR + EE + W+V
Sbjct: 250 SDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 281
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + + ++E D A ++Q+LSG Y+H+ +I H L P +LL+ L+
Sbjct: 105 GGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIK 164
Query: 523 LTDFGLSRRITSFGKLN 539
+ DFGLS GK+
Sbjct: 165 IVDFGLSAHFEVGGKMK 181
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRN----YAAKVMTGKGNQYKSLF--KNELDIMNQLCHRNLVR 244
LG+G G V+ V++ SG + YA KV+ + + K E DI+ ++ H +V+
Sbjct: 32 LGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
LH +++T+ +I + GG+L L+++ +TE D+ Y+ +L LD++H L I +
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P ++L+ G H+ LTDFGLS+
Sbjct: 151 DLKPENILLDEEG--HIKLTDFGLSK 174
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L L+++ +TE D+ Y+ +L LD++H L I + L P ++L+ G H+ L
Sbjct: 110 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKL 167
Query: 524 TDFGLSR 530
TDFGLS+
Sbjct: 168 TDFGLSK 174
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 941 VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
V+ T + + + L +LH G+ + +++P+N+++ +KL D G ++
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESID 178
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
+ E+ APEV+ D WS GVL + +L+G PF+G+ ET
Sbjct: 179 HEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLIFK 1088
+ + L+ EA L ++FK
Sbjct: 238 ILKAKLGMPQF---LSPEAQSLLRMLFK 262
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEV+ D WS GVL + +L+G PF+G+ ET + + L+
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF---LS 250
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L ++FKR P R
Sbjct: 251 PEAQSLLRMLFKRNPANR 268
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS---LFKNELDIMNQL 237
++D Y +LG G G V ++ +G A K++ S +E+ ++ QL
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
H N+++L++ +E K ++ ++ E+ GGEL + + ++E D A ++Q+LSG Y+H
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLN 339
+ +I H L P +LL+ L+ + DFGLS GK+
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 164
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G YLH + H +++P+N+++ S R +K++D G + G +
Sbjct: 107 AVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 166
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
+ T + APEVL + + DVWS GV+ Y+LL G PF GQ++ E + V ++
Sbjct: 167 LGTAY--YIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS 223
Query: 1068 FE-YLFKELTQEATRFLMLIFKHE 1090
F+ + +++ EA + + L+ +E
Sbjct: 224 FDPPDWTQVSDEAKQLVKLMLTYE 247
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
APEVL + + DVWS GV+ Y+LL G PF GQ++ E + V ++ F+ + ++
Sbjct: 174 APEVL-RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
+ EA + + L+ P KR + EE + W+V
Sbjct: 233 SDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 264
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + + ++E D A ++Q+LSG Y+H+ +I H L P +LL+ L+
Sbjct: 88 GGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIK 147
Query: 523 LTDFGLSRRITSFGKLN 539
+ DFGLS GK+
Sbjct: 148 IVDFGLSAHFEVGGKMK 164
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGN-------QYKSLFKNELDIMN 235
Y+ + LGRGV+ +V + + + + YA K++ TG G+ + + E+DI+
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 236 QLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
++ H N+++L D+YET F ++ +L GEL LT + +E + +R LL +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
+H+L+I H L P ++L+ ++ LTDFG S ++ KL
Sbjct: 126 ALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKL 167
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++L+ + LH + H +++P+N+++ + +KL D G + ++ L TP+
Sbjct: 119 ALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKLREVCGTPS- 175
Query: 1014 EFAAPEVLA-----EEPIF-PQTDVWSAGVLAYVLLSGASPF 1049
+ APE++ P + + D+WS GV+ Y LL+G+ PF
Sbjct: 176 -YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GEL LT + +E + +R LL + +H+L+I H L P ++L+ ++ LT
Sbjct: 96 GELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLT 153
Query: 525 DFGLSRRITSFGKL 538
DFG S ++ KL
Sbjct: 154 DFGFSCQLDPGEKL 167
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1156 QTDVWSAGVLAYVLLSGASPF 1176
+ D+WS GV+ Y LL+G+ PF
Sbjct: 196 EVDMWSTGVIMYTLLAGSPPF 216
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRN----YAAKVMTGKGNQYKSLF--KNELDIMNQLCHRNLVR 244
LG+G G V+ V++ SG + YA KV+ + + K E DI+ ++ H +V+
Sbjct: 32 LGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
LH +++T+ +I + GG+L L+++ +TE D+ Y+ +L LD++H L I +
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P ++L+ G H+ LTDFGLS+
Sbjct: 151 DLKPENILLDEEG--HIKLTDFGLSK 174
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L L+++ +TE D+ Y+ +L LD++H L I + L P ++L+ G H+ L
Sbjct: 110 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKL 167
Query: 524 TDFGLSR 530
TDFGLS+
Sbjct: 168 TDFGLSK 174
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 941 VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
V+ T + + + L +LH G+ + +++P+N+++ +KL D G ++
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESID 178
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
+ E+ APEV+ D WS GVL + +L+G PF+G+ ET
Sbjct: 179 HEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLIFK 1088
+ + L+ EA L ++FK
Sbjct: 238 ILKAKLGMPQF---LSPEAQSLLRMLFK 262
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV+ D WS GVL + +L+G PF+G+ ET + + L
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF---L 249
Query: 1203 TQEATRFLMLIFKRAPGKR 1221
+ EA L ++FKR P R
Sbjct: 250 SPEAQSLLRMLFKRNPANR 268
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRN----YAAKVMTGKGNQYKSLF--KNELDIMNQLCHRNLVR 244
LG+G G V+ V++ SG + YA KV+ + + K E DI+ ++ H +V+
Sbjct: 33 LGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
LH +++T+ +I + GG+L L+++ +TE D+ Y+ +L LD++H L I +
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR 151
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P ++L+ G H+ LTDFGLS+
Sbjct: 152 DLKPENILLDEEG--HIKLTDFGLSK 175
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L L+++ +TE D+ Y+ +L LD++H L I + L P ++L+ G H+ L
Sbjct: 111 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKL 168
Query: 524 TDFGLSR 530
TDFGLS+
Sbjct: 169 TDFGLSK 175
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 941 VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
V+ T + + + L +LH G+ + +++P+N+++ +KL D G ++
Sbjct: 122 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESID 179
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
+ E+ APEV+ D WS GVL + +L+G PF+G+ ET
Sbjct: 180 HEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLIFK 1088
+ + L+ EA L ++FK
Sbjct: 239 ILKAKLGMPQF---LSPEAQSLLRMLFK 263
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV+ D WS GVL + +L+G PF+G+ ET + + L
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF---L 250
Query: 1203 TQEATRFLMLIFKRAPGKR 1221
+ EA L ++FKR P R
Sbjct: 251 SPEAQSLLRMLFKRNPANR 269
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGN-------QYKSLFKNELDIMN 235
Y+ + LGRGV+ +V + + + + YA K++ TG G+ + + E+DI+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 236 QLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
++ H N+++L D+YET F ++ +L GEL LT + +E + +R LL +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
+H+L+I H L P ++L+ ++ LTDFG S ++ KL
Sbjct: 139 ALHKLNIVHRDLKPENILLD--DDMNIKLTDFGFSCQLDPGEKL 180
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++L+ + LH + H +++P+N+++ + +KL D G + ++ L TP+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKLREVCGTPS- 188
Query: 1014 EFAAPEVLA-----EEPIF-PQTDVWSAGVLAYVLLSGASPF 1049
+ APE++ P + + D+WS GV+ Y LL+G+ PF
Sbjct: 189 -YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GEL LT + +E + +R LL + +H+L+I H L P ++L+ ++ LT
Sbjct: 109 GELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD--DDMNIKLT 166
Query: 525 DFGLSRRITSFGKL 538
DFG S ++ KL
Sbjct: 167 DFGFSCQLDPGEKL 180
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1156 QTDVWSAGVLAYVLLSGASPF 1176
+ D+WS GV+ Y LL+G+ PF
Sbjct: 209 EVDMWSTGVIMYTLLAGSPPF 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGN-------QYKSLFKNELDIMN 235
Y+ + LGRGV+ +V + + + + YA K++ TG G+ + + E+DI+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 236 QLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
++ H N+++L D+YET F ++ +L GEL LT + +E + +R LL +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
+H+L+I H L P ++L+ ++ LTDFG S ++ KL
Sbjct: 139 ALHKLNIVHRDLKPENILLD--DDMNIKLTDFGFSCQLDPGEKL 180
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++L+ + LH + H +++P+N+++ + +KL D G + ++ L TP+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKLRSVCGTPS- 188
Query: 1014 EFAAPEVLA-----EEPIF-PQTDVWSAGVLAYVLLSGASPF 1049
+ APE++ P + + D+WS GV+ Y LL+G+ PF
Sbjct: 189 -YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GEL LT + +E + +R LL + +H+L+I H L P ++L+ ++ LT
Sbjct: 109 GELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD--DDMNIKLT 166
Query: 525 DFGLSRRITSFGKL 538
DFG S ++ KL
Sbjct: 167 DFGFSCQLDPGEKL 180
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-----EYLFKELTQEATRFL 1210
+ D+WS GV+ Y LL+G+ PF + + + + Y+F + + +RFL
Sbjct: 209 EVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFL 268
Query: 1211 MLIFKRAPGKRPTVEE 1226
++ P KR T EE
Sbjct: 269 VV----QPQKRYTAEE 280
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
++G G TGIV A RSSG+ A K M + Q + L NE+ IM H N+V +++SY
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
D ++ E GG L +T + E IA +L L +H + H +
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 276
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
+L+ H G + L+DFG +++
Sbjct: 277 SILLTHDG--RVKLSDFGFCAQVS 298
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
A C+ +VL L LH +G+ H +I+ D++++ +VKL D G C Q ++
Sbjct: 251 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 307
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ TP + APE+++ P P+ D+WS G++ ++ G P+
Sbjct: 308 VGTPY--WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
Score = 36.6 bits (83), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+++ P P+ D+WS G++ ++ G P+ +EP + + +R K L
Sbjct: 315 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPPLKA-MKMIRDNLPPRLKNLH 371
Query: 1204 QEATR---FLMLIFKRAPGKRPTVEECHENRWL 1233
+ + FL + R P +R T E ++ +L
Sbjct: 372 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
++G G TGIV A RSSG+ A K M + Q + L NE+ IM H N+V +++SY
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
D ++ E GG L +T + E IA +L L +H + H +
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 154
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
+L+ H G + L+DFG +++
Sbjct: 155 SILLTHDG--RVKLSDFGFCAQVS 176
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-------- 1000
A C+ +VL L LH +G+ H +I+ D++++ +VKL D G +V+K
Sbjct: 129 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 185
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APE+++ P P+ D+WS G++ ++ G P+
Sbjct: 186 VGT---------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
Score = 36.6 bits (83), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+++ P P+ D+WS G++ ++ G P+ +EP + + +R K L
Sbjct: 193 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPPLKA-MKMIRDNLPPRLKNLH 249
Query: 1204 QEATR---FLMLIFKRAPGKRPTVEECHENRWL 1233
+ + FL + R P +R T E ++ +L
Sbjct: 250 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
++G G TGIV A RSSG+ A K M + Q + L NE+ IM H N+V +++SY
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
D ++ E GG L +T + E IA +L L +H + H +
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 156
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
+L+ H G + L+DFG +++
Sbjct: 157 SILLTHDG--RVKLSDFGFCAQVS 178
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-------- 1000
A C+ +VL L LH +G+ H +I+ D++++ +VKL D G +V+K
Sbjct: 131 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 187
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APE+++ P P+ D+WS G++ ++ G P+
Sbjct: 188 VGT---------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+++ P P+ D+WS G++ ++ G P+ +EP + + +R K L
Sbjct: 195 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPPLKA-MKMIRDNLPPRLKNLH 251
Query: 1204 QEATR---FLMLIFKRAPGKRPTVEECHENRWL 1233
+ + FL + R P +R T E ++ +L
Sbjct: 252 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
+L+ L+Y H + H +++P+NV++AS S VKL D G ++ + G L+ P
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG-LVAGGRVGTP 197
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
F APEV+ EP DVW GV+ ++LLSG PF G E
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSL----FKNELDIMNQL 237
D Y+ + +G+G +V + R +G+ +A K++ K L K E I + L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGL 293
H ++V L ++Y + ++ E G +L + +++ Y+E +HY+RQ+L L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 294 DYMHRLSIAHLGLTPGDLLVA-HPGGRHLLLTDFGLSRRITSFG 336
Y H +I H + P ++L+A + L DFG++ ++ G
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY---LF 1199
APEV+ EP DVW GV+ ++LLSG PF G E R ++ +++ +
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGIIKGKYKMNPRQW 256
Query: 1200 KELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+++ A + + P +R TV E + WL
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 464 GGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA-HPGG 518
G +L + +++ Y+E +HY+RQ+L L Y H +I H + P ++L+A
Sbjct: 110 GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENS 169
Query: 519 RHLLLTDFGLSRRITSFG 536
+ L DFG++ ++ G
Sbjct: 170 APVKLGDFGVAIQLGESG 187
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
++G G TGIV A RSSG+ A K M + Q + L NE+ IM H N+V +++SY
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
D ++ E GG L +T + E IA +L L +H + H +
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 145
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
+L+ H G + L+DFG +++
Sbjct: 146 SILLTHDG--RVKLSDFGFCAQVS 167
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-------- 1000
A C+ +VL L LH +G+ H +I+ D++++ +VKL D G +V+K
Sbjct: 120 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 176
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APE+++ P P+ D+WS G++ ++ G P+
Sbjct: 177 VGT---------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
Score = 36.6 bits (83), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+++ P P+ D+WS G++ ++ G P+ +EP + + +R K L
Sbjct: 184 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPPLKA-MKMIRDNLPPRLKNLH 240
Query: 1204 QEATR---FLMLIFKRAPGKRPTVEECHENRWL 1233
+ + FL + R P +R T E ++ +L
Sbjct: 241 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFK 228
G + ++ +++ Y +LG G G V ++ + A K++ T S
Sbjct: 25 GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
E+ ++ L H N+++L+D +E K ++ ++ E GGEL + + + E D A I+Q
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQ 144
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLS 329
+LSG+ Y+H+ +I H L P +LL+ L+ + DFGLS
Sbjct: 145 VLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G+ YLH + H +++P+N+++ S + +K++D G + +
Sbjct: 139 AVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER 198
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
+ T + APEVL + + DVWS GV+ ++LL+G PF GQ++ E + V +Y
Sbjct: 199 LGTAY--YIAPEVL-RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT 255
Query: 1068 FE 1069
F+
Sbjct: 256 FD 257
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + + + E D A I+Q+LSG+ Y+H+ +I H L P +LL+ L+
Sbjct: 120 GGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIK 179
Query: 523 LTDFGLS 529
+ DFGLS
Sbjct: 180 IVDFGLS 186
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + + DVWS GV+ ++LL+G PF GQ++ E + V +Y F+ +K +
Sbjct: 206 APEVL-RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV 264
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFL 1249
++ A + + + +R + ++ E+ W+ + M K+E + L
Sbjct: 265 SEGAKDLIKQMLQFDSQRRISAQQALEHPWI---KEMCSKKESGIEL 308
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
++G G TGIV A RSSG+ A K M + Q + L NE+ IM H N+V +++SY
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
D ++ E GG L +T + E IA +L L +H + H +
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 149
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
+L+ H G + L+DFG +++
Sbjct: 150 SILLTHDG--RVKLSDFGFCAQVS 171
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-------- 1000
A C+ +VL L LH +G+ H +I+ D++++ +VKL D G +V+K
Sbjct: 124 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 180
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APE+++ P P+ D+WS G++ ++ G P+
Sbjct: 181 VGT---------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
Score = 37.0 bits (84), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+++ P P+ D+WS G++ ++ G P+ +EP + + +R K L
Sbjct: 188 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPPLKA-MKMIRDNLPPRLKNLH 244
Query: 1204 QEATR---FLMLIFKRAPGKRPTVEECHENRWL 1233
+ + FL + R P +R T E ++ +L
Sbjct: 245 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+++G+G +G VY A++ ++G+ A + M + K L NE+ +M + + N+V DS
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
Y D ++ E GG L +T ++ E IA R+ L L+++H + H +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKS 145
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
++L+ G + LTDFG +IT
Sbjct: 146 DNILLGMDGS--VKLTDFGFCAQIT 168
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
A L L++LH + H NI+ DN+++ SV KL D G C Q R T
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSTM 177
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 178 VGT---------PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
++G G TGIV A RSSG+ A K M + Q + L NE+ IM H N+V +++SY
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
D ++ E GG L +T + E IA +L L +H + H +
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 199
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
+L+ H G + L+DFG +++
Sbjct: 200 SILLTHDG--RVKLSDFGFCAQVS 221
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
A C+ +VL L LH +G+ H +I+ D++++ +VKL D G C Q ++
Sbjct: 174 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 230
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ TP + APE+++ P P+ D+WS G++ ++ G P+
Sbjct: 231 VGTPY--WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL- 1202
APE+++ P P+ D+WS G++ ++ G P+ +EP + + +R K L
Sbjct: 238 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPPLKA-MKMIRDNLPPRLKNLH 294
Query: 1203 --TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ FL + R P +R T E ++ +L
Sbjct: 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+++G+G +G VY A++ ++G+ A + M + K L NE+ +M + + N+V DS
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
Y D ++ E GG L +T ++ E IA R+ L L+++H + H +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 145
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
++L+ G + LTDFG +IT
Sbjct: 146 DNILLGMDGS--VKLTDFGFCAQIT 168
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
A L L++LH + H +I+ DN+++ SV KL D G C Q +
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSXM 177
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ TP + APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 178 VGTPY--WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 178 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--------QYKSLFKN 229
K YD D +GRGV+ +V V R++G +A K+M + + +
Sbjct: 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148
Query: 230 ELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
E I+ Q+ H +++ L DSYE+ ++ +L GEL LT + +E + +R
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
LL + ++H +I H L P ++L+ + L+DFG S + KL L
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLD--DNMQIRLSDFGFSCHLEPGEKLREL 259
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 64/120 (53%), Gaps = 11/120 (9%)
Query: 937 YLPIVIPTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT 995
YL + + K+ + S+L+ + +LH + H +++P+N+++ ++Q++L D G +
Sbjct: 190 YLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD--NMQIRLSDFGFS 247
Query: 996 QRVTKLGTLIHPINTPNPEFAAPEVL--AEEPIFP----QTDVWSAGVLAYVLLSGASPF 1049
+ L TP + APE+L + + P + D+W+ GV+ + LL+G+ PF
Sbjct: 248 CHLEPGEKLRELCGTPG--YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
Score = 37.0 bits (84), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 1068 FEYLFKE--LTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNV 1125
F+YL ++ L+++ TR +M V ++ ANNI H +++ + N RLS
Sbjct: 188 FDYLTEKVALSEKETRSIMRSLLEAVSFLH-ANNIVHRDLKPENILLDDNMQIRLSD--- 243
Query: 1126 IGWSEKGIPSALFKTKEQAPEVLAEEPI-----------FPQTDVWSAGVLAYVLLSGAS 1174
G+S P + P LA E + + D+W+ GV+ + LL+G+
Sbjct: 244 FGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303
Query: 1175 PF 1176
PF
Sbjct: 304 PF 305
Score = 37.0 bits (84), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GEL LT + +E + +R LL + ++H +I H L P ++L+ + L+
Sbjct: 185 GELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD--DNMQIRLS 242
Query: 525 DFGLSRRITSFGKLNPL 541
DFG S + KL L
Sbjct: 243 DFGFSCHLEPGEKLREL 259
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 53 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
K YD D +GRGV+ +V V R++G +A K+M
Sbjct: 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIM 127
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+++G+G +G VY A++ ++G+ A + M + K L NE+ +M + + N+V DS
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
Y D ++ E GG L +T ++ E IA R+ L L+++H + H +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
++L+ G + LTDFG +IT
Sbjct: 145 DNILLGMDGS--VKLTDFGFCAQIT 167
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
A L L++LH + H +I+ DN+++ SV KL D G C Q +
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSEM 176
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ TP + APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 177 VGTPY--WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+++G+G +G VY A++ ++G+ A + M + K L NE+ +M + + N+V DS
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
Y D ++ E GG L +T ++ E IA R+ L L+++H + H +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
++L+ G + LTDFG +IT
Sbjct: 145 DNILLGMDGS--VKLTDFGFCAQIT 167
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
A L L++LH + H +I+ DN+++ SV KL D G C Q +
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSXM 176
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ TP + APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 177 VGTPY--WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+++G+G +G VY A++ ++G+ A + M + K L NE+ +M + + N+V DS
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
Y D ++ E GG L +T ++ E IA R+ L L+++H + H +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
++L+ G + LTDFG +IT
Sbjct: 145 DNILLGMDGS--VKLTDFGFCAQIT 167
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
A L L++LH + H +I+ DN+++ SV KL D G C Q R T
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSTM 176
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 177 VGT---------PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHR 240
+ F +G+G G V A ++ YA KV+ K + K + ++ + H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
LV LH S++T D + + GGEL + L R+ + E Y ++ S L Y+H L+
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I + L P ++L+ G H++LTDFGL +
Sbjct: 160 IVYRDLKPENILLDSQG--HIVLTDFGLCK 187
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPI 1008
+ + L YLH + + +++P+N+++ S + L D G C + + T
Sbjct: 143 FYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNSTTSTFC 200
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
TP E+ APEVL ++P D W G + Y +L G PF ++ E N+
Sbjct: 201 GTP--EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + L R+ + E Y ++ S L Y+H L+I + L P ++L+ G H++L
Sbjct: 123 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVL 180
Query: 524 TDFGLSR 530
TDFGL +
Sbjct: 181 TDFGLCK 187
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1188
APEVL ++P D W G + Y +L G PF ++ E N+
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
++G G TGIV A E+ SGR A K+M + Q + L NE+ IM H N+V ++ SY
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
+ ++ E GG L + Q E IA +L L Y+H + H +
Sbjct: 112 LVGEELWVLMEFLQGGA-LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSD 170
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
+L+ G + L+DFG +I+
Sbjct: 171 SILLTLDG--RVKLSDFGFCAQIS 192
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 914 KCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIE 973
K VGE V+ F G + + V + A +VL L YLH +G+ H +I+
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 974 PDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDV 1032
D++++ +VKL D G C Q + + TP + APEV++ + D+
Sbjct: 169 SDSILLT--LDGRVKLSDFGFCAQISKDVPKRKXLVGTPY--WMAPEVISRSLYATEVDI 224
Query: 1033 WSAGVLAYVLLSGASPFRGQS 1053
WS G++ ++ G P+ S
Sbjct: 225 WSLGIMVIEMVDGEPPYFSDS 245
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN 235
TR D ++ ELG G G VY A + + AAKV+ K + + E+DI+
Sbjct: 30 TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGEL-LHSLTRQSYYTEYDIAHYIRQLLSGLD 294
H N+V+L D++ +++ I+ E GG + L + TE I +Q L L+
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
Y+H I H L G++L G + L DFG+S + T
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNT 186
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRH 652
P D ++ I E+ G F V KA K T L AAK+ + S + L E D L S H
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNK-ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HY 710
I LL+A+ +N+ +L+ GA L TE + + Q + +Y
Sbjct: 94 PNIVKLLDAF---YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 711 LKKNR 715
L N+
Sbjct: 151 LHDNK 155
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
TE I +Q L L+Y+H I H L G++L G + L DFG+S + T
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNT 186
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 924 VIQWFKLGTSTLCYLPIVIPTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASV 982
+I++ G L + P T V LD L YLH + H +++ N++
Sbjct: 112 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT-- 169
Query: 983 RSVQVKLIDLGCTQRVTK-LGTLIHPINTP---NPEFAAPEVLAEEPIFPQTDVWSAGV 1037
+KL D G + + T+ + I TP PE E + P + DVWS G+
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELD 232
R K + +D+ LG+G G V E+++GR YA K++ + K + E
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 233 IMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
++ H L L +++T D + E A GGEL L+R+ +TE Y +++S
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 120
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L+Y+H + + + +L++ G H+ +TDFGL + S G
Sbjct: 121 LEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 162
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
++ L+YLH R + + +I+ +N+++ + +K+ D G C + ++ T+ TP
Sbjct: 117 IVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTP-- 172
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
E+ APEVL + D W GV+ Y ++ G PF Q + + RF +
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---R 229
Query: 1074 ELTQEATRFLMLIFKHE 1090
L+ EA L + K +
Sbjct: 230 TLSPEAKSLLAGLLKKD 246
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L+R+ +TE Y +++S L+Y+H + + + +L++ G H+ +
Sbjct: 92 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKI 149
Query: 524 TDFGLSRRITSFGKLNPLEYGNGQY 548
TDFGL + S G G +Y
Sbjct: 150 TDFGLCKEGISDGATMKTFCGTPEY 174
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + RF + L+
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLS 232
Query: 1204 QEATRFLMLIFKRAPGKR-----PTVEECHENRWLVPSEY--MIKKRERAVFLGNRLKEF 1256
EA L + K+ P +R +E E+R+ + + +++K+ F E
Sbjct: 233 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEV 292
Query: 1257 SDEYHDLKNKQFTSDSLS 1274
Y D +FT+ S++
Sbjct: 293 DTRYFD---DEFTAQSIT 307
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGTISHSVT 102
R K + +D+ LG+G G V E+++GR YA K V+ K ++H+VT
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 57
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
D ++ ELG G G VY A + + AAKV+ K + + E+DI+ H N+
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 243 VRLHDSYETKDSFTIISELAGGGEL-LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
V+L D++ +++ I+ E GG + L + TE I +Q L L+Y+H I
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
H L G++L G + L DFG+S + T
Sbjct: 157 IHRDLKAGNILFTLDGD--IKLADFGVSAKNT 186
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRH 652
P D ++ I E+ G F V KA K T L AAK+ + S + L E D L S H
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNK-ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HY 710
I LL+A+ +N+ +L+ GA L TE + + Q + +Y
Sbjct: 94 PNIVKLLDAF---YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 711 LKKNR 715
L N+
Sbjct: 151 LHDNK 155
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
TE I +Q L L+Y+H I H L G++L G + L DFG+S + T
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNT 186
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 924 VIQWFKLGTSTLCYLPIVIPTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASV 982
+I++ G L + P T V LD L YLH + H +++ N++
Sbjct: 112 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT-- 169
Query: 983 RSVQVKLIDLGCTQRVTK-LGTLIHPINTP---NPEFAAPEVLAEEPIFPQTDVWSAGV 1037
+KL D G + + T+ + I TP PE E + P + DVWS G+
Sbjct: 170 LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN 235
TR D ++ ELG G G VY A + + AAKV+ K + + E+DI+
Sbjct: 30 TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGEL-LHSLTRQSYYTEYDIAHYIRQLLSGLD 294
H N+V+L D++ +++ I+ E GG + L + TE I +Q L L+
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
Y+H I H L G++L G + L DFG+S + T
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNT 186
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRH 652
P D ++ I E+ G F V KA K T L AAK+ + S + L E D L S H
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNK-ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HY 710
I LL+A+ +N+ +L+ GA L TE + + Q + +Y
Sbjct: 94 PNIVKLLDAF---YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 711 LKKNR 715
L N+
Sbjct: 151 LHDNK 155
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
TE I +Q L L+Y+H I H L G++L G + L DFG+S + T
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNT 186
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 924 VIQWFKLGTSTLCYLPIVIPTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASV 982
+I++ G L + P T V LD L YLH + H +++ N++
Sbjct: 112 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT-- 169
Query: 983 RSVQVKLIDLGCTQRVTK-LGTLIHPINTP---NPEFAAPEVLAEEPIFPQTDVWSAGV 1037
+KL D G + + T+ + I TP PE E + P + DVWS G+
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
++G G TGIV A E+ +G+ A K M + Q + L NE+ IM H N+V ++ SY
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
D ++ E GG L +T + E IA +L L Y+H + H +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
+L+ G + L+DFG +++
Sbjct: 171 SILLTSDG--RIKLSDFGFCAQVS 192
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
A SVL L YLH +G+ H +I+ D++++ S ++KL D G C Q ++
Sbjct: 144 ATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS--DGRIKLSDFGFCAQVSKEVPKRKXL 201
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ TP + APEV++ P + D+WS G++ ++ G P+
Sbjct: 202 VGTPY--WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEV++ P + D+WS G++ ++ G P+ +EP Q + +R K+L
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF--NEPPL-QAMRRIRDSLPPRVKDLH 265
Query: 1204 QEAT---RFLMLIFKRAPGKRPTVEE 1226
+ ++ FL L+ R P +R T +E
Sbjct: 266 KVSSVLRGFLDLMLVREPSQRATAQE 291
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDI 233
+ K D +D G LG+G G VY A E+ + A KV+ + + + + E++I
Sbjct: 9 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 68
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
+ L H N++R+++ + + ++ E A GEL L + + E A ++ +L L
Sbjct: 69 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 128
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
Y H + H + P +LL+ + G L + DFG S
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWS 162
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT------QRVTK 1000
+ A + + D L Y H R + H +I+P+N++M ++K+ D G + +R
Sbjct: 116 RSATFMEELADALHYCHERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXM 173
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GTL ++ PE++ + + D+W AGVL Y L G PF S ET +
Sbjct: 174 CGTL---------DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 224
Query: 1061 VNFVRYRF 1068
+ V +F
Sbjct: 225 IVNVDLKF 232
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
P GEL L + + E A ++ +L L Y H + H + P +LL+ + G L
Sbjct: 97 APRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--EL 154
Query: 522 LLTDFGLS 529
+ DFG S
Sbjct: 155 KIADFGWS 162
Score = 37.0 bits (84), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1204
PE++ + + D+W AGVL Y L G PF S ET + + V +F L+
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF---LSD 238
Query: 1205 EATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + + + P +R ++ E+ W+
Sbjct: 239 GSKDLISKLLRYHPPQRLPLKGVMEHPWV 267
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDI 233
+ K D +D G LG+G G VY A E+ + A KV+ + + + + E++I
Sbjct: 8 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
+ L H N++R+++ + + ++ E A GEL L + + E A ++ +L L
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
Y H + H + P +LL+ + G L + DFG S
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWS 161
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT------QRVTK 1000
+ A + + D L Y H R + H +I+P+N++M ++K+ D G + +R
Sbjct: 115 RSATFMEELADALHYCHERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXM 172
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GTL ++ PE++ + + D+W AGVL Y L G PF S ET +
Sbjct: 173 CGTL---------DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223
Query: 1061 VNFVRYRF 1068
+ V +F
Sbjct: 224 IVNVDLKF 231
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
P GEL L + + E A ++ +L L Y H + H + P +LL+ + G L
Sbjct: 96 APRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--EL 153
Query: 522 LLTDFGLS 529
+ DFG S
Sbjct: 154 KIADFGWS 161
Score = 37.0 bits (84), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1204
PE++ + + D+W AGVL Y L G PF S ET + + V +F L+
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF---LSD 237
Query: 1205 EATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + + + P +R ++ E+ W+
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHPWV 266
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ +QY H + + H +++ +N+++ + + +K+ D G + T G L +P
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTVGGKL--DTFCGSP 174
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YL 1071
+AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 234
Query: 1072 FKELTQEATRFLML 1085
+ RFL+L
Sbjct: 235 STDCENLLKRFLVL 248
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQ 236
+P Y +G+G V A +GR A K++ SL K E+ IM
Sbjct: 8 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 67
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
L H N+V+L + ET+ + +I E A GGE+ L E + RQ++S + Y
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYC 127
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
H+ I H L +LL+ ++ + DFG S T GKL+
Sbjct: 128 HQKRIVHRDLKAENLLL--DADMNIKIADFGFSNEFTVGGKLD 168
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+ + RFL+L
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVL- 248
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
P KR T+E+ ++RW+
Sbjct: 249 ---NPIKRGTLEQIMKDRWI 265
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L E + RQ++S + Y H+ I H L +LL+ ++ +
Sbjct: 95 GGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL--DADMNIKI 152
Query: 524 TDFGLSRRITSFGKLN 539
DFG S T GKL+
Sbjct: 153 ADFGFSNEFTVGGKLD 168
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
K + +D+ LG+G G V E+++GR YA K++ + K + E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
H L L +++T D + E A GGEL L+R+ +TE Y +++S L+Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+H + + + +L++ G H+ +TDFGL + S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTP 1011
++ L+YLH R + + +I+ +N+++ + +K+ D G C + ++ T+ TP
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
E+ APEVL + D W GV+ Y ++ G PF Q + + RF
Sbjct: 170 --EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-- 225
Query: 1072 FKELTQEATRFLMLIFKHE 1090
+ L+ EA L + K +
Sbjct: 226 -RTLSPEAKSLLAGLLKKD 243
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L+R+ +TE Y +++S L+Y+H + + + +L++ G H+ +
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKI 146
Query: 524 TDFGLSRRITSFGKLNPLEYGNGQY 548
TDFGL + S G G +Y
Sbjct: 147 TDFGLCKEGISDGATMKXFCGTPEY 171
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + RF + L+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLS 229
Query: 1204 QEATRFLMLIFKRAPGKR-----PTVEECHENRWLVPSEY--MIKKRERAVFLGNRLKEF 1256
EA L + K+ P +R +E E+R+ + + +++K+ F E
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEV 289
Query: 1257 SDEYHDLKNKQFTSDSLS 1274
Y D +FT+ S++
Sbjct: 290 DTRYFD---DEFTAQSIT 304
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGTISHSVT 102
K + +D+ LG+G G V E+++GR YA K V+ K ++H+VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 121 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYT 180
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 181 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + +
Sbjct: 5 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREV--- 59
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 60 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 118
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPC 178
Query: 343 YDVRYVRQALRHP 355
Y YV + P
Sbjct: 179 YTPYYVAPEVLGP 191
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRFEY-L 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 244
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 245 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 301
Query: 1259 EYHDLKNKQFTS 1270
+ D+K + ++
Sbjct: 302 RWEDVKEEMTSA 313
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 97 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 156
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 157 LKLTDFGFAKETTSHNSL 174
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
K + +D+ LG+G G V E+++GR YA K++ + K + E ++
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
H L L +++T D + E A GGEL L+R+ +TE Y +++S L+Y
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+H + + + +L++ G H+ +TDFGL + S G
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 164
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTP 1011
++ L+YLH R + + +I+ +N+++ + +K+ D G C + ++ T+ TP
Sbjct: 117 AEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTP 174
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
E+ APEVL + D W GV+ Y ++ G PF Q + + RF
Sbjct: 175 --EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-- 230
Query: 1072 FKELTQEATRFLMLIFKHE 1090
+ L+ EA L + K +
Sbjct: 231 -RTLSPEAKSLLAGLLKKD 248
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L+R+ +TE Y +++S L+Y+H + + + +L++ G H+ +
Sbjct: 94 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKI 151
Query: 524 TDFGLSRRITSFGKLNPLEYGNGQY 548
TDFGL + S G G +Y
Sbjct: 152 TDFGLCKEGISDGATMKXFCGTPEY 176
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + RF + L+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLS 234
Query: 1204 QEATRFLMLIFKRAPGKR-----PTVEECHENRWLVPSEY--MIKKRERAVFLGNRLKEF 1256
EA L + K+ P +R +E E+R+ + + +++K+ F E
Sbjct: 235 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEV 294
Query: 1257 SDEYHDLKNKQFTSDSLS 1274
Y D +FT+ S++
Sbjct: 295 DTRYFD---DEFTAQSIT 309
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGTISHSVT 102
K + +D+ LG+G G V E+++GR YA K V+ K ++H+VT
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 59
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
K + +D+ LG+G G V E+++GR YA K++ + K + E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
H L L +++T D + E A GGEL L+R+ +TE Y +++S L+Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+H + + + +L++ G H+ +TDFGL + S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
++ L+YLH R + + +I+ +N+++ + +K+ D G C + ++ T+ TP
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTP-- 169
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
E+ APEVL + D W GV+ Y ++ G PF Q + + RF +
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---R 226
Query: 1074 ELTQEATRFLMLIFKHE 1090
L+ EA L + K +
Sbjct: 227 TLSPEAKSLLAGLLKKD 243
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L+R+ +TE Y +++S L+Y+H + + + +L++ G H+ +
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKI 146
Query: 524 TDFGLSRRITSFGKLNPLEYGNGQY 548
TDFGL + S G G +Y
Sbjct: 147 TDFGLCKEGISDGATMKXFCGTPEY 171
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + RF + L+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLS 229
Query: 1204 QEATRFLMLIFKRAPGKR-----PTVEECHENRWLVPSEY--MIKKRERAVFLGNRLKEF 1256
EA L + K+ P +R +E E+R+ + + +++K+ F E
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEV 289
Query: 1257 SDEYHDLKNKQFTSDSLS 1274
Y D +FT+ S++
Sbjct: 290 DTRYFD---DEFTAQSIT 304
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGTISHSVT 102
K + +D+ LG+G G V E+++GR YA K V+ K ++H+VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
K + +D+ LG+G G V E+++GR YA K++ + K + E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
H L L +++T D + E A GGEL L+R+ +TE Y +++S L+Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+H + + + +L++ G H+ +TDFGL + S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
++ L+YLH R + + +I+ +N+++ + +K+ D G C + ++ T+ TP
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTP-- 169
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
E+ APEVL + D W GV+ Y ++ G PF Q + + RF +
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---R 226
Query: 1074 ELTQEATRFLMLIFKHE 1090
L+ EA L + K +
Sbjct: 227 TLSPEAKSLLAGLLKKD 243
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L+R+ +TE Y +++S L+Y+H + + + +L++ G H+ +
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKI 146
Query: 524 TDFGLSRRITSFGKLNPLEYGNGQY 548
TDFGL + S G G +Y
Sbjct: 147 TDFGLCKEGISDGATMKTFCGTPEY 171
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + RF + L+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLS 229
Query: 1204 QEATRFLMLIFKRAPGKR-----PTVEECHENRWLVPSEY--MIKKRERAVFLGNRLKEF 1256
EA L + K+ P +R +E E+R+ + + +++K+ F E
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEV 289
Query: 1257 SDEYHDLKNKQFTSDSLS 1274
Y D +FT+ S++
Sbjct: 290 DTRYFD---DEFTAQSIT 304
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGTISHSVT 102
K + +D+ LG+G G V E+++GR YA K V+ K ++H+VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
K + +D+ LG+G G V E+++GR YA K++ + K + E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
H L L +++T D + E A GGEL L+R+ +TE Y +++S L+Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+H + + + +L++ G H+ +TDFGL + S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTP 1011
++ L+YLH R + + +I+ +N+++ + +K+ D G C + ++ T+ TP
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
E+ APEVL + D W GV+ Y ++ G PF Q + + RF
Sbjct: 170 --EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-- 225
Query: 1072 FKELTQEATRFLMLIFKHE 1090
+ L+ EA L + K +
Sbjct: 226 -RTLSPEAKSLLAGLLKKD 243
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L+R+ +TE Y +++S L+Y+H + + + +L++ G H+ +
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKI 146
Query: 524 TDFGLSRRITSFGKLNPLEYGNGQY 548
TDFGL + S G G +Y
Sbjct: 147 TDFGLCKEGISDGATMKXFCGTPEY 171
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + RF + L+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLS 229
Query: 1204 QEATRFLMLIFKRAPGKR-----PTVEECHENRWLVPSEY--MIKKRERAVFLGNRLKEF 1256
EA L + K+ P +R +E E+R+ + + +++K+ F E
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEV 289
Query: 1257 SDEYHDLKNKQFTSDSLS 1274
Y D +FT+ S++
Sbjct: 290 DTRYFD---DEFTAQSIT 304
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGTISHSVT 102
K + +D+ LG+G G V E+++GR YA K V+ K ++H+VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 183 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 14/186 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + +
Sbjct: 7 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREV--- 61
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 62 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 180
Query: 343 YDVRYV 348
Y YV
Sbjct: 181 YTPYYV 186
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 246
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 247 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 303
Query: 1259 EYHDLKNKQFTS 1270
+ D+K + ++
Sbjct: 304 RWEDVKEEMTSA 315
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 159 LKLTDFGFAKETTSHNSL 176
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
K + +D+ LG+G G V E+++GR YA K++ + K + E ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
H L L +++T D + E A GGEL L+R+ +TE Y +++S L+Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+H + + + +L++ G H+ +TDFGL + S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
++ L+YLH R + + +I+ +N+++ + +K+ D G C + ++ T+ TP
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTP-- 169
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
E+ APEVL + D W GV+ Y ++ G PF Q + + RF +
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---R 226
Query: 1074 ELTQEATRFLMLIFKHE 1090
L+ EA L + K +
Sbjct: 227 TLSPEAKSLLAGLLKKD 243
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L+R+ +TE Y +++S L+Y+H + + + +L++ G H+ +
Sbjct: 89 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKI 146
Query: 524 TDFGLSRRITSFGKLNPLEYGNGQY 548
TDFGL + S G G +Y
Sbjct: 147 TDFGLCKEGISDGATMKTFCGTPEY 171
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + RF + L+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLS 229
Query: 1204 QEATRFLMLIFKRAPGKR-----PTVEECHENRWLVPSEY--MIKKRERAVFLGNRLKEF 1256
EA L + K+ P +R +E E+R+ + + +++K+ F E
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEV 289
Query: 1257 SDEYHDLKNKQFTSDSLS 1274
Y D +FT+ S++
Sbjct: 290 DTRYFD---DEFTAQSIT 304
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGTISHSVT 102
K + +D+ LG+G G V E+++GR YA K V+ K ++H+VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 167 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 227 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 14/186 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + +
Sbjct: 51 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREV--- 105
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 106 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 164
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 165 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 224
Query: 343 YDVRYV 348
Y YV
Sbjct: 225 YTPYYV 230
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 290
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 291 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 347
Query: 1259 EYHDLKNKQFTS 1270
+ D+K + ++
Sbjct: 348 RWEDVKEEMTSA 359
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 202
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 203 LKLTDFGFAKETTSHNSL 220
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLC 238
D ++ +G+G G V + + + YA K M + N+ +++FK EL IM L
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQGLE 73
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H LV L S++ ++ ++ +L GG+L + L + ++ E + +I +L+ LDY+
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
I H + P ++L+ G H+ +TDF ++
Sbjct: 134 QRIIHRDMKPDNILLDEHG--HVHITDFNIA 162
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L + L + ++ E + +I +L+ LDY+ I H + P ++L+ G H+ +
Sbjct: 99 GGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG--HVHI 156
Query: 524 TDFGLS 529
TDF ++
Sbjct: 157 TDFNIA 162
Score = 36.6 bits (83), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC-----TQRVTKLGTLIH 1006
+ ++ L YL + + H +++PDN+++ V + ++ TQ T GT
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGT--- 177
Query: 1007 PINTPNPEFAAPEVLAEEP---IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
+ APE+ + D WS GV AY LL G P+ +S +++ V+
Sbjct: 178 ------KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH 230
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 173 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 232
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 233 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + K+ +
Sbjct: 57 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREV 111
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 112 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 170
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 171 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 230
Query: 343 YDVRYV 348
Y YV
Sbjct: 231 YTPYYV 236
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 296
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 297 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 353
Query: 1259 EYHDLKNKQFTS 1270
+ D+K + ++
Sbjct: 354 RWEDVKEEMTSA 365
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 149 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 208
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 209 LKLTDFGFAKETTSHNSL 226
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 6 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A GE+ L + S + E A YI +L +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
L Y H + H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 178
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 171 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 222 RIS----RVEFTFPDFVTEGARDLISRLLKH 248
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 247 KHNPSQRPMLREVLEHPWI 265
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
P GE+ L + S + E A YI +L + L Y H + H + P +LL+ G L
Sbjct: 95 APRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--EL 152
Query: 522 LLTDFGL------SRRITSFGKLNPL 541
+ DFG SRR T G L+ L
Sbjct: 153 KIADFGWSVHAPSSRRTTLCGTLDYL 178
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ +QY H + + H +++ +N+++ + + +K+ D G + T G L P
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTVGGKL--DAFCGAP 177
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YL 1071
+AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 237
Query: 1072 FKELTQEATRFLML 1085
+ RFL+L
Sbjct: 238 STDCENLLKRFLVL 251
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQ 236
+P Y +G+G V A +GR A K++ SL K E+ IM
Sbjct: 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
L H N+V+L + ET+ + +I E A GGE+ L E + RQ++S + Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYC 130
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
H+ I H L +LL+ ++ + DFG S T GKL+
Sbjct: 131 HQKRIVHRDLKAENLLL--DADMNIKIADFGFSNEFTVGGKLDAF 173
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+ + RFL+L
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVL- 251
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
P KR T+E+ ++RW+
Sbjct: 252 ---NPIKRGTLEQIMKDRWI 268
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L E + RQ++S + Y H+ I H L +LL+ ++ +
Sbjct: 98 GGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL--DADMNIKI 155
Query: 524 TDFGLSRRITSFGKLNPL 541
DFG S T GKL+
Sbjct: 156 ADFGFSNEFTVGGKLDAF 173
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 183 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + +
Sbjct: 7 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREV--- 61
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 62 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 180
Query: 343 YDVRYVRQALRHP 355
Y YV + P
Sbjct: 181 YTPYYVAPEVLGP 193
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 246
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 247 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 303
Query: 1259 EYHDLKNKQFTS 1270
+ D+K + ++
Sbjct: 304 RWEDVKEEMTSA 315
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 159 LKLTDFGFAKETTSHNSL 176
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 129 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 188
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 189 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + +
Sbjct: 13 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREV--- 67
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 68 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 126
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 127 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 186
Query: 343 YDVRYVRQALRHP 355
Y YV + P
Sbjct: 187 YTPYYVAPEVLGP 199
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 252
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 253 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 309
Query: 1259 EYHDLKNK 1266
+ D+K +
Sbjct: 310 RWEDVKEE 317
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 105 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 164
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 165 LKLTDFGFAKETTSHNSL 182
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 122 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 181
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 182 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + +
Sbjct: 6 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREV--- 60
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 61 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 119
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 120 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 179
Query: 343 YDVRYVRQALRHP 355
Y YV + P
Sbjct: 180 YTPYYVAPEVLGP 192
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 245
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 246 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 302
Query: 1259 EYHDLKNKQFTS 1270
+ D+K + ++
Sbjct: 303 RWEDVKEEMTSA 314
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 98 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 157
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 158 LKLTDFGFAKETTSHNSL 175
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 121 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 180
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRY 1066
P + APEVL E D+WS GV+ Y+LL G PF P + + +Y
Sbjct: 181 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
Query: 1067 RF-EYLFKELTQEATRFLMLIFKHE 1090
F + E+++E + + K E
Sbjct: 239 EFPNPEWSEVSEEVKMLIRNLLKTE 263
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + +
Sbjct: 5 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREV--- 59
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 60 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 118
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 178
Query: 343 YDVRYVRQALRHP 355
Y YV + P
Sbjct: 179 YTPYYVAPEVLGP 191
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 244
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 245 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 301
Query: 1259 EYHDLKNKQFTS 1270
+ D+K + ++
Sbjct: 302 RWEDVKEEMTSA 313
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 97 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 156
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 157 LKLTDFGFAKETTSHNSL 174
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 128 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 187
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 188 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + +
Sbjct: 12 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREV--- 66
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 67 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 125
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 126 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 185
Query: 343 YDVRYVRQALRHP 355
Y YV + P
Sbjct: 186 YTPYYVAPEVLGP 198
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRFEYL- 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 251
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 252 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 308
Query: 1259 EYHDLKNK 1266
+ D+K +
Sbjct: 309 RWEDVKEE 316
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 104 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 163
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 164 LKLTDFGFAKETTSHNSL 181
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
Length = 324
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 127 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 186
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 187 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 14/193 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + +
Sbjct: 11 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREV--- 65
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 66 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 124
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 125 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 184
Query: 343 YDVRYVRQALRHP 355
Y YV + P
Sbjct: 185 YTPYYVAPEVLGP 197
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRFEYL- 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 250
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 251 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 307
Query: 1259 EYHDLKNK 1266
+ D+K +
Sbjct: 308 RWEDVKEE 315
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 103 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 162
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 163 LKLTDFGFAKETTSHNSL 180
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P T
Sbjct: 137 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 196
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEVL E D+WS GV+ Y+LL G PF
Sbjct: 197 PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + K+ +
Sbjct: 21 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREV 75
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQS--YYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 76 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 134
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 135 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 194
Query: 343 YDVRYVRQALRHP 355
Y YV + P
Sbjct: 195 YTPYYVAPEVLGP 207
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF P + + +Y F
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 260
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W++ S K + + LKE +
Sbjct: 261 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 317
Query: 1259 EYHDLKNKQFTS 1270
+ D+K + ++
Sbjct: 318 RWEDVKEEMTSA 329
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 113 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 172
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 173 LKLTDFGFAKETTSHNSL 190
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 158 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 217
+N E + + + K R + D ++ G LG+G G VY A E+ S A KV+
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 218 GKGNQYKSL---FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ 274
+ + + E++I + L H N++RL+ + +I E A G + L +
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------ 328
S + E A YI +L + L Y H + H + P +LL+ G L + DFG
Sbjct: 129 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPS 186
Query: 329 SRRITSFGKLNPL 341
SRR T G L+ L
Sbjct: 187 SRRTTLCGTLDYL 199
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 191
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 192 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKHEVDWITLANNIDHEFWHVKDLKRETNYTF 1118
++ R E+ F + E R L+ + KH + + W + + +N
Sbjct: 243 RIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 298
Query: 1119 RLSA 1122
+ SA
Sbjct: 299 KESA 302
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 267
Query: 1215 KRAPGKRPTVEECHENRWLV 1234
K P +RP + E E+ W+
Sbjct: 268 KHNPSQRPMLREVLEHPWIT 287
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
+Q+ + TD Y+ +++G G + + +++ +A K++ ++ K E+
Sbjct: 11 QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKII----DKSKRDPTEEI 66
Query: 232 DIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+I+ + H N++ L D Y+ +++EL GGELL + RQ +++E + + + +
Sbjct: 67 EILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
++Y+H + H L P ++L G + + DFG ++++
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRV-TKLGTLIHPINTPNPEF 1015
++YLH +G+ H +++P N++ S +++ D G +++ + G L P T N F
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN--F 186
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
APEVL + D+WS GVL Y L+G +PF
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHL 521
GGELL + RQ +++E + + + + ++Y+H + H L P ++L G +
Sbjct: 100 GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESI 159
Query: 522 LLTDFGLSRRI 532
+ DFG ++++
Sbjct: 160 RICDFGFAKQL 170
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEVL + D+WS GVL Y L+G +PF
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHD 247
D LG G V + + + YA K++ + +S E++++ Q HRN++ L +
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
+E +D F ++ E GG +L + ++ ++ E + + ++ + S LD++H IAH L
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 308 PGDLLVAHPGG-RHLLLTDFGLSRRITSFGKLNPL 341
P ++L HP + + DFGL I G +P+
Sbjct: 139 PENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPI 173
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ-VKLIDLGCTQRVTKLGTLIHPINT 1010
V V L +LH +G+ H +++P+N++ V VK+ D G + KL PI+T
Sbjct: 117 VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGI-KLNGDCSPIST 175
Query: 1011 P-------NPEFAAPEVLA----EEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQS 1053
P + E+ APEV+ E I+ + D+WS GV+ Y+LLSG PF G+
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLL 522
GG +L + ++ ++ E + + ++ + S LD++H IAH L P ++L HP +
Sbjct: 95 GGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVK 154
Query: 523 LTDFGLSRRITSFGKLNPL 541
+ DFGL I G +P+
Sbjct: 155 ICDFGLGSGIKLNGDCSPI 173
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 1144 APEVLA----EEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQS 1180
APEV+ E I+ + D+WS GV+ Y+LLSG PF G+
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
Length = 400
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
S+ + +QYLH + H +++P+N++ S R + +KL D G + T +L P TP
Sbjct: 169 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ APEVL E D WS GV+ Y+LL G PF
Sbjct: 229 --YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 14/186 (7%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K + + +
Sbjct: 51 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREV--- 105
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 106 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREAS 164
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
+ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 165 EIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 224
Query: 343 YDVRYV 348
Y YV
Sbjct: 225 YTPYYV 230
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
APEVL E D WS GV+ Y+LL G PF P + + +Y F
Sbjct: 231 APEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPE 290
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
+ E+++E + + K P +R T+ E + W+ S K + + LKE +
Sbjct: 291 WSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS---TKVPQTPLHTSRVLKEDKE 347
Query: 1259 EYHDLK 1264
+ D+K
Sbjct: 348 RWEDVK 353
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + + + + Y+H ++IAH + P +LL +
Sbjct: 143 GGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 202
Query: 522 L-LTDFGLSRRITSFGKL 538
L LTDFG ++ TS L
Sbjct: 203 LKLTDFGFAKETTSHNSL 220
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 158 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 217
+N E + + + K R + D ++ G LG+G G VY A E+ S A KV+
Sbjct: 1 ENNPEEELASKQKNEESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 59
Query: 218 GKGNQYKSL---FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ 274
+ + + E++I + L H N++RL+ + +I E A G + L +
Sbjct: 60 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 119
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------ 328
S + E A YI +L + L Y H + H + P +LL+ G L + DFG
Sbjct: 120 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPS 177
Query: 329 SRRITSFGKLNPL 341
SRR T G L+ L
Sbjct: 178 SRRTTLCGTLDYL 190
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 125 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 182
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 183 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 233
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 234 RIS----RVEFTFPDFVTEGARDLISRLLKH 260
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 258
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 259 KHNPSQRPMLREVLEHPWI 277
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFK 228
K + + + +++ LG+G G V E+++GR YA K V+ K +L +
Sbjct: 142 AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 201
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
N ++ H L L S++T D + E A GGEL L+R+ ++E Y +
Sbjct: 202 NR--VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 289 LLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
++S LDY+H ++ + L +L++ G H+ +TDFGL +
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLCK 300
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Query: 953 TSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
++ L YLH + + + +++ +N+++ + +K+ D G + K G +
Sbjct: 258 AEIVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKTF-CG 314
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
PE+ APEVL + D W GV+ Y ++ G PF Q + + + RF
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 371
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL L+R+ ++E Y +++S LDY+H ++ + L +L++ G H+
Sbjct: 235 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIK 292
Query: 523 LTDFGLSR 530
+TDFGL +
Sbjct: 293 ITDFGLCK 300
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + + RF + L
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLG 376
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L + K+ P +R
Sbjct: 377 PEAKSLLSGLLKKDPKQR 394
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC--HRNLVRLHDS 248
LG G I V + S + +A K+++ + ++ + E+ + +LC H N+V+LH+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITAL-KLCEGHPNIVKLHEV 74
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
+ + ++ EL GGEL + ++ +++E + ++ +R+L+S + +MH + + H L P
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 309 GDLLVAHPGGR-HLLLTDFGLSR 330
+LL + + DFG +R
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFAR 157
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHP 1007
+Y + ++ + ++H G+ H +++P+N++ ++++K+ID G L P
Sbjct: 109 SYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFG-------FARLKPP 161
Query: 1008 INTP--NPEF----AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ-------SE 1054
N P P F AAPE+L + D+WS GV+ Y +LSG PF+ S
Sbjct: 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSA 221
Query: 1055 PETRQNVNFVRYRFE-YLFKELTQEATRFL 1083
E + + + FE +K ++QEA +
Sbjct: 222 VEIMKKIKKGDFSFEGEAWKNVSQEAKDLI 251
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 1133 IPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ-------SEPETR 1185
+ + F APE+L + D+WS GV+ Y +LSG PF+ S E
Sbjct: 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225
Query: 1186 QNVNFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + + FE +K ++QEA + + P KR + N WL
Sbjct: 226 KKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
GGEL + ++ +++E + ++ +R+L+S + +MH + + H L P +LL +
Sbjct: 90 GGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIK 149
Query: 523 LTDFGLSR 530
+ DFG +R
Sbjct: 150 IIDFGFAR 157
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFK 228
K + + + +++ LG+G G V E+++GR YA K V+ K +L +
Sbjct: 139 AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 198
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
N ++ H L L S++T D + E A GGEL L+R+ ++E Y +
Sbjct: 199 NR--VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 289 LLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
++S LDY+H ++ + L +L++ G H+ +TDFGL +
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLCK 297
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 955 VLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ L YLH + + + +++ +N+++ + +K+ D G + K G + P
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKTF-CGTP 313
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
E+ APEVL + D W GV+ Y ++ G PF Q + + + RF
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 368
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL L+R+ ++E Y +++S LDY+H ++ + L +L++ G H+
Sbjct: 232 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIK 289
Query: 523 LTDFGLSR 530
+TDFGL +
Sbjct: 290 ITDFGLCK 297
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + + RF + L
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLG 373
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L + K+ P +R
Sbjct: 374 PEAKSLLSGLLKKDPKQR 391
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
+L+ L+Y H + H +++P V++AS S VKL G ++ + G L+ P
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-LVAGGRVGTP 197
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
F APEV+ EP DVW GV+ ++LLSG PF G E
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSL----FKNELDIMNQL 237
D Y+ + +G+G +V + R +G+ +A K++ K L K E I + L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGL 293
H ++V L ++Y + ++ E G +L + +++ Y+E +HY+RQ+L L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 294 DYMHRLSIAHLGLTPGDLLVA 314
Y H +I H + P +L+A
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLA 164
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY---LF 1199
APEV+ EP DVW GV+ ++LLSG PF G E R ++ +++ +
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGIIKGKYKMNPRQW 256
Query: 1200 KELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+++ A + + P +R TV E + WL
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 464 GGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA 514
G +L + +++ Y+E +HY+RQ+L L Y H +I H + P +L+A
Sbjct: 110 GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 164
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
+L+ L+Y H + H +++P V++AS S VKL G ++ + G L+ P
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-LVAGGRVGTP 199
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
F APEV+ EP DVW GV+ ++LLSG PF G E
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSL----FKNELDIMNQL 237
D Y+ + +G+G +V + R +G+ +A K++ K L K E I + L
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGL 293
H ++V L ++Y + ++ E G +L + +++ Y+E +HY+RQ+L L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 294 DYMHRLSIAHLGLTPGDLLVA 314
Y H +I H + P +L+A
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLA 166
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY---LF 1199
APEV+ EP DVW GV+ ++LLSG PF G E R ++ +++ +
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGIIKGKYKMNPRQW 258
Query: 1200 KELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+++ A + + P +R TV E + WL
Sbjct: 259 SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 292
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 464 GGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA 514
G +L + +++ Y+E +HY+RQ+L L Y H +I H + P +L+A
Sbjct: 112 GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 166
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
+Q+ + TD Y+ +++G G + + +++ +A K++ ++ K E+
Sbjct: 11 QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII----DKSKRDPTEEI 66
Query: 232 DIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+I+ + H N++ L D Y+ +++EL GGELL + RQ +++E + + + +
Sbjct: 67 EILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
++Y+H + H L P ++L G + + DFG ++++
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRV-TKLGTLIHPINTPNPEF 1015
++YLH +G+ H +++P N++ S +++ D G +++ + G L+ P T N F
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN--F 186
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
APEVL + D+WS GVL Y +L+G +PF
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHL 521
GGELL + RQ +++E + + + + ++Y+H + H L P ++L G +
Sbjct: 100 GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESI 159
Query: 522 LLTDFGLSRRITSFGKL--NPLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLN 579
+ DFG ++++ + L P N V P + Q A +L L
Sbjct: 160 RICDFGFAKQLRAENGLLMTPCYTAN-----FVAPEVLERQGYDAACDIWSLG----VLL 210
Query: 580 YSVEDSPIEWSTEPPTDKYQFISEIHRGKFSV 611
Y++ ++ P + ++ I GKFS+
Sbjct: 211 YTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEVL + D+WS GVL Y +L+G +PF
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 178 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL 237
TK + +D ++LG G G VY A+ + +G+ A K + + + + + E+ IM Q
Sbjct: 24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII--KEISIMQQC 81
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM 296
++V+ + SY I+ E G G + + R TE +IA ++ L GL+Y+
Sbjct: 82 DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL 141
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
H + H + G++L+ G H L DFG++ ++T
Sbjct: 142 HFMRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLT 176
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT-KLGTLIHP 1007
A + S L GL+YLH+ H +I+ N+++ + KL D G ++T +
Sbjct: 128 ATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT--EGHAKLADFGVAGQLTDXMAKRNXV 185
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
I TP + APEV+ E D+WS G+ A + G P+
Sbjct: 186 IGTPF--WMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
R TE +IA ++ L GL+Y+H + H + G++L+ G H L DFG++ ++
Sbjct: 118 RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG--HAKLADFGVAGQL 175
Query: 533 T 533
T
Sbjct: 176 T 176
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINTP 1011
++ +QY H + + H +++ +N+++ + + +K+ D G + T KL T
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLDTF-----CG 174
Query: 1012 NPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE- 1069
+P +AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234
Query: 1070 YLFKELTQEATRFLML 1085
Y+ + +FL+L
Sbjct: 235 YMSTDCENLLKKFLIL 250
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQ 236
+P Y +G+G V A +G+ A K++ SL K E+ IM
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
L H N+V+L + ET+ + ++ E A GGE+ L E + RQ++S + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
H+ I H L +LL+ ++ + DFG S T KL+
Sbjct: 130 HQKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLD 170
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+ + +FL+L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
P KR T+E+ ++RW+
Sbjct: 251 ---NPSKRGTLEQIMKDRWM 267
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L E + RQ++S + Y H+ I H L +LL+ ++ +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL--DADMNIKI 154
Query: 524 TDFGLSRRITSFGKLN 539
DFG S T KL+
Sbjct: 155 ADFGFSNEFTFGNKLD 170
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINT 1010
++ +QY H + + H +++ +N+++ + + +K+ D G + T KL T
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLDTF-----C 173
Query: 1011 PNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
+P +AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 1070 -YLFKELTQEATRFLML 1085
Y+ + +FL+L
Sbjct: 234 FYMSTDCENLLKKFLIL 250
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQ 236
+P Y +G+G V A +G+ A K++ SL K E+ IM
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
L H N+V+L + ET+ + ++ E A GGE+ L E + RQ++S + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
H+ I H L +LL+ ++ + DFG S T KL+
Sbjct: 130 HQKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLD 170
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+ + +FL+L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
P KR T+E+ ++RW+
Sbjct: 251 ---NPSKRGTLEQIMKDRWM 267
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L E + RQ++S + Y H+ I H L +LL+ ++ +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL--DADMNIKI 154
Query: 524 TDFGLSRRITSFGKLN 539
DFG S T KL+
Sbjct: 155 ADFGFSNEFTFGNKLD 170
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINT 1010
++ +QY H + + H +++ +N+++ + + +K+ D G + T KL T
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLDTF-----C 173
Query: 1011 PNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
+P +AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 1070 -YLFKELTQEATRFLML 1085
Y+ + +FL+L
Sbjct: 234 FYMSTDCENLLKKFLIL 250
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+ + +FL+L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
P KR T+E+ ++RW+
Sbjct: 251 ---NPSKRGTLEQIMKDRWM 267
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQ 236
+P Y +G+G V A +G+ A +++ SL K E+ IM
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
L H N+V+L + ET+ + ++ E A GGE+ L E + RQ++S + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
H+ I H L +LL+ ++ + DFG S T KL+
Sbjct: 130 HQKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLD 170
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L E + RQ++S + Y H+ I H L +LL+ ++ +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL--DADMNIKI 154
Query: 524 TDFGLSRRITSFGKLN 539
DFG S T KL+
Sbjct: 155 ADFGFSNEFTFGNKLD 170
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
Length = 319
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINT 1010
++ +QY H + + H +++ +N+++ + + +K+ D G + T KL T
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLDTF-----C 166
Query: 1011 PNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
+P +AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 226
Query: 1070 -YLFKELTQEATRFLML 1085
Y+ + +FL+L
Sbjct: 227 FYMSTDCENLLKKFLIL 243
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQLCHRNLVRLHDS 248
+G+G V A +G+ A K++ SL K E+ IM L H N+V+L +
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
ET+ + ++ E A GGE+ L + E + RQ++S + Y H+ I H L
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKA 134
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
+LL+ ++ + DFG S T KL+
Sbjct: 135 ENLLL--DADMNIKIADFGFSNEFTFGNKLD 163
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+ + +FL+L
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 243
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
P KR T+E+ ++RW+
Sbjct: 244 ---NPSKRGTLEQIMKDRWM 260
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L + E + RQ++S + Y H+ I H L +LL+ ++ +
Sbjct: 90 GGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL--DADMNIKI 147
Query: 524 TDFGLSRRITSFGKLN 539
DFG S T KL+
Sbjct: 148 ADFGFSNEFTFGNKLD 163
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 183 DAYDFGDEL-GRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHR 240
D Y EL G G V AV +G+ YA K++ + +S E++ + Q ++
Sbjct: 12 DMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
N++ L + +E F ++ E GG +L + +Q ++ E + + +R + + LD++H
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 301 IAHLGLTPGDLLVAHP 316
IAH L P ++L P
Sbjct: 132 IAHRDLKPENILCESP 147
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMAS---VRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
V V L +LH +G+ H +++P+N++ S V V++ DLG KL PI
Sbjct: 117 VRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSG---MKLNNSCTPI 173
Query: 1009 NTP-------NPEFAAPEVL---AEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQS 1053
TP + E+ APEV+ ++ F + D+WS GV+ Y++LSG PF G
Sbjct: 174 TTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 516
GG +L + +Q ++ E + + +R + + LD++H IAH L P ++L P
Sbjct: 95 GGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESP 147
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 1146 EVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQS 1180
EV ++ F + D+WS GV+ Y++LSG PF G
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230
Score = 30.0 bits (66), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 596 DKYQFISEI-HRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLR-HE 653
D Y+ SE+ G ++ V A N + + + + + +V E + L + ++
Sbjct: 12 DMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 654 RIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATII 703
I L+E ++ T LV EKLQG +L+++ + + E+ + ++
Sbjct: 72 NILELIEFFEDDTRF----YLVFEKLQGGSILAHIQKQKHFNEREASRVV 117
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
+D G LG+G G VY A ER S A KV+ + + + E++I + L H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 134 IHRDIKPENLLLGSNG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 177
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRTT 169
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 170 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKHEVDW-ITLANNIDH 1102
++ R E+ F + E R L+ + KH +TLA ++H
Sbjct: 221 RIS----RVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEH 261
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1204
PE++ + D+WS GVL Y L G PF + ET + ++ R E+ F +
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS----RVEFTFPDFVT 234
Query: 1205 EATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
E R L+ + K +R T+ E E+ W+
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 6 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A GE+ L + S + E A YI +L +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
L Y H + H + P +LL+ G L + DFG S
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 160
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRXX 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 171 LXGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 222 RIS----RVEFTFPDFVTEGARDLISRLLKH 248
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 247 KHNPSQRPMLREVLEHPWI 265
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
P GE+ L + S + E A YI +L + L Y H + H + P +LL+ G L
Sbjct: 95 APRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--EL 152
Query: 522 LLTDFGLS 529
+ DFG S
Sbjct: 153 KIADFGWS 160
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---- 226
G + K + D Y LG G G V A ER + + A K+++ + S
Sbjct: 4 GSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 63
Query: 227 ----FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDI 282
+ E++I+ +L H ++++ + ++ +D + I+ EL GGEL + E
Sbjct: 64 PALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATC 122
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
Y Q+L + Y+H I H L P ++L++ L+ +TDFG S+
Sbjct: 123 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 171
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 947 KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
K+A C +L +QYLH G+ H +++P+NV+++S +K+ D G ++ + +
Sbjct: 118 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 177
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF-RGQSEPETR 1058
+ TP + APEVL D WS GV+ ++ LSG PF +++ +
Sbjct: 178 LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 235
Query: 1059 QNVNFVRYRF-EYLFKELTQEATRFL--MLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
+ +Y F ++ E++++A + +L+ + + T + H + +D+KR+
Sbjct: 236 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT-EEALRHPWLQDEDMKRK 292
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 1157 TDVWSAGVLAYVLLSGASPF-RGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIF 1214
D WS GV+ ++ LSG PF +++ + + +Y F ++ E++++A + +
Sbjct: 206 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 265
Query: 1215 KRAPGKRPTVEECHENRWL 1233
P R T EE + WL
Sbjct: 266 VVDPKARFTTEEALRHPWL 284
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + E Y Q+L + Y+H I H L P ++L++ L+
Sbjct: 104 GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 163
Query: 523 LTDFGLSR 530
+TDFG S+
Sbjct: 164 ITDFGHSK 171
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
Length = 327
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ +QY H + + H +++ +N+++ + + +K+ D G + T G + +P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFT-FGNKLDEF-CGSP 176
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YL 1071
+AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 236
Query: 1072 FKELTQEATRFLML 1085
+ +FL+L
Sbjct: 237 STDCENLLKKFLIL 250
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+ + +FL+L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
P KR T+E+ ++RW+
Sbjct: 251 ---NPSKRGTLEQIMKDRWM 267
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQ 236
+P Y +G+G V A +G+ A +++ SL K E+ IM
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
L H N+V+L + ET+ + ++ E A GGE+ L E + RQ++S + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
H+ I H L +LL+ ++ + DFG S T KL+
Sbjct: 130 HQKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLD 170
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L E + RQ++S + Y H+ I H L +LL+ ++ +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL--DADMNIKI 154
Query: 524 TDFGLSRRITSFGKLN 539
DFG S T KL+
Sbjct: 155 ADFGFSNEFTFGNKLD 170
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 158 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 217
+N E + + + K R + D ++ G LG+G G VY A E+ S A KV+
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 218 GKGNQYKSL---FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ 274
+ + + E++I + L H N++RL+ + +I E A G + L +
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
S + E A YI +L + L Y H + H + P +LL+ G L + DFG S
Sbjct: 129 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 181
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRDD 191
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 192 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKHEVDWITLANNIDHEFWHVKDLKRETNYTF 1118
++ R E+ F + E R L+ + KH + + W + + +N
Sbjct: 243 RIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 298
Query: 1119 RLSA 1122
+ SA
Sbjct: 299 KESA 302
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 267
Query: 1215 KRAPGKRPTVEECHENRWLV 1234
K P +RP + E E+ W+
Sbjct: 268 KHNPSQRPMLREVLEHPWIT 287
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDI 233
+ K D +D LG+G G VY A E+ + A KV+ + + + + E++I
Sbjct: 8 KRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
+ L H N++R+++ + + ++ E A GEL L + + E A ++ +L L
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
Y H + H + P +LL+ + G L + DFG S
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWS 161
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT------QRVTK 1000
+ A + + D L Y H R + H +I+P+N++M ++K+ D G + +R
Sbjct: 115 RSATFMEELADALHYCHERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXM 172
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GTL ++ PE++ + + D+W AGVL Y L G PF S ET +
Sbjct: 173 CGTL---------DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223
Query: 1061 VNFVRYRF 1068
+ V +F
Sbjct: 224 IVNVDLKF 231
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
P GEL L + + E A ++ +L L Y H + H + P +LL+ + G L
Sbjct: 96 APRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--EL 153
Query: 522 LLTDFGLS 529
+ DFG S
Sbjct: 154 KIADFGWS 161
Score = 37.0 bits (84), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1204
PE++ + + D+W AGVL Y L G PF S ET + + V +F L+
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF---LSD 237
Query: 1205 EATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + + + P +R ++ E+ W+
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHPWV 266
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
LG+G G V E+++GR YA K V+ K +L +N ++ H L L
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR--VLQNSRHPFLTAL 75
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHL 304
S++T D + E A GGEL L+R+ ++E Y +++S LDY+H ++ +
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 135
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L +L++ G H+ +TDFGL +
Sbjct: 136 DLKLENLMLDKDG--HIKITDFGLCK 159
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 955 VLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ L YLH + + + +++ +N+++ + +K+ D G + K G + P
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKXF-CGTP 175
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
E+ APEVL + D W GV+ Y ++ G PF Q + + + RF
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL L+R+ ++E Y +++S LDY+H ++ + L +L++ G H+
Sbjct: 94 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIK 151
Query: 523 LTDFGLSR 530
+TDFGL +
Sbjct: 152 ITDFGLCK 159
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + + RF + L
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLG 235
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L + K+ P +R
Sbjct: 236 PEAKSLLSGLLKKDPKQR 253
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
K + D Y LG G G V A ER + + A K+++ + S + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
++I+ +L H ++++ + ++ +D + I+ EL GGEL + E Y Q+L
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
+ Y+H I H L P ++L++ L+ +TDFG S+
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 947 KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
K+A C +L +QYLH G+ H +++P+NV+++S +K+ D G ++ + +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
+ TP + APEVL D WS GV+ ++ LSG PF
Sbjct: 172 LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 1157 TDVWSAGVLAYVLLSGASPF-RGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIF 1214
D WS GV+ ++ LSG PF +++ + + +Y F ++ E++++A + +
Sbjct: 200 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 259
Query: 1215 KRAPGKRPTVEECHENRWL 1233
P R T EE + WL
Sbjct: 260 VVDPKARFTTEEALRHPWL 278
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + E Y Q+L + Y+H I H L P ++L++ L+
Sbjct: 98 GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 157
Query: 523 LTDFGLSR 530
+TDFG S+
Sbjct: 158 ITDFGHSK 165
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent Biochemical
And Cell- Based Activity Throughout The Series
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFA 1016
+Q+LH + H +++P+N++ S + +KL D G + T+ L P TP +
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-NALQTPCYTPY--YV 177
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF---RGQS-EPETRQNVNFVRYRF-EYL 1071
APEVL E D+WS GV+ Y+LL G PF GQ+ P ++ + +Y F
Sbjct: 178 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 1072 FKELTQEATRFLMLIFKHE-VDWITLANNIDH 1102
+ E++++A + + L+ K + + +T+ ++H
Sbjct: 238 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 269
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 14/170 (8%)
Query: 181 ITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH 239
+TD Y + LG GV G V R +G+ A K++ + E+D Q
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA-----RQEVDHHWQASG 61
Query: 240 R-NLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSG 292
++V + D YE K II E GGEL + + +TE + A +R + +
Sbjct: 62 GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 121
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPL 341
+ ++H +IAH + P +LL +L LTDFG ++ T P
Sbjct: 122 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC 171
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF---RGQS-EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF GQ+ P ++ + +Y F
Sbjct: 178 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ E++++A + + L+ K P +R T+ + + W+
Sbjct: 238 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
Score = 36.6 bits (83), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 464 GGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + A +R + + + ++H +IAH + P +LL +
Sbjct: 91 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV 150
Query: 522 L-LTDFGLSRRITSFGKLNPL 541
L LTDFG ++ T P
Sbjct: 151 LKLTDFGFAKETTQNALQTPC 171
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
LG+G G V E+++GR YA K V+ K +L +N ++ H L L
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR--VLQNSRHPFLTAL 74
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHL 304
S++T D + E A GGEL L+R+ ++E Y +++S LDY+H ++ +
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 134
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L +L++ G H+ +TDFGL +
Sbjct: 135 DLKLENLMLDKDG--HIKITDFGLCK 158
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Query: 953 TSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
++ L YLH + + + +++ +N+++ + +K+ D G + K G +
Sbjct: 116 AEIVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKXF-CG 172
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
PE+ APEVL + D W GV+ Y ++ G PF Q + + + RF
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL L+R+ ++E Y +++S LDY+H ++ + L +L++ G H+
Sbjct: 93 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIK 150
Query: 523 LTDFGLSR 530
+TDFGL +
Sbjct: 151 ITDFGLCK 158
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + + RF + L
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLG 234
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L + K+ P +R
Sbjct: 235 PEAKSLLSGLLKKDPKQR 252
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
K + D Y LG G G V A ER + + A K+++ + S + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
++I+ +L H ++++ + ++ +D + I+ EL GGEL + E Y Q+L
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
+ Y+H I H L P ++L++ L+ +TDFG S+
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 947 KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
K+A C +L +QYLH G+ H +++P+NV+++S +K+ D G ++ + +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF-RGQSEPETR 1058
+ TP + APEVL D WS GV+ ++ LSG PF +++ +
Sbjct: 172 LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229
Query: 1059 QNVNFVRYRF-EYLFKELTQEATRFL--MLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
+ +Y F ++ E++++A + +L+ + + T + H + +D+KR+
Sbjct: 230 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT-EEALRHPWLQDEDMKRK 286
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 1157 TDVWSAGVLAYVLLSGASPF-RGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIF 1214
D WS GV+ ++ LSG PF +++ + + +Y F ++ E++++A + +
Sbjct: 200 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 259
Query: 1215 KRAPGKRPTVEECHENRWL 1233
P R T EE + WL
Sbjct: 260 VVDPKARFTTEEALRHPWL 278
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + E Y Q+L + Y+H I H L P ++L++ L+
Sbjct: 98 GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 157
Query: 523 LTDFGLSR 530
+TDFG S+
Sbjct: 158 ITDFGHSK 165
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor
Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHPINTP--NPE 1014
+Q+LH + H +++P+N++ S + +KL D G + T+ + + TP P
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-----NALQTPCYTPY 194
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF---RGQS-EPETRQNVNFVRYRF-E 1069
+ APEVL E D+WS GV+ Y+LL G PF GQ+ P ++ + +Y F
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 1070 YLFKELTQEATRFLMLIFKHE-VDWITLANNIDH 1102
+ E++++A + + L+ K + + +T+ ++H
Sbjct: 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 181 ITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH 239
+TD Y + LG GV G V R +G+ A K++ + E+D Q
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA-----RQEVDHHWQASG 80
Query: 240 R-NLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSG 292
++V + D YE K II E GGEL + + +TE + A +R + +
Sbjct: 81 GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRIT 333
+ ++H +IAH + P +LL +L LTDFG ++ T
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF---RGQS-EPETRQNVNFVRYRF-EYL 1198
APEVL E D+WS GV+ Y+LL G PF GQ+ P ++ + +Y F
Sbjct: 197 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ E++++A + + L+ K P +R T+ + + W+
Sbjct: 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 464 GGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + A +R + + + ++H +IAH + P +LL +
Sbjct: 110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV 169
Query: 522 L-LTDFGLSRRIT 533
L LTDFG ++ T
Sbjct: 170 LKLTDFGFAKETT 182
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
K + D Y LG G G V A ER + + A K+++ + S + E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
++I+ +L H ++++ + ++ +D + I+ EL GGEL + E Y Q+L
Sbjct: 65 IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 123
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
+ Y+H I H L P ++L++ L+ +TDFG S+
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 164
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 947 KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
K+A C +L +QYLH G+ H +++P+NV+++S +K+ D G ++ + +
Sbjct: 111 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 170
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF-RGQSEPETR 1058
+ TP + APEVL D WS GV+ ++ LSG PF +++ +
Sbjct: 171 LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 228
Query: 1059 QNVNFVRYRF-EYLFKELTQEATRFL--MLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
+ +Y F ++ E++++A + +L+ + + T + H + +D+KR+
Sbjct: 229 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT-EEALRHPWLQDEDMKRK 285
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 1157 TDVWSAGVLAYVLLSGASPF-RGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIF 1214
D WS GV+ ++ LSG PF +++ + + +Y F ++ E++++A + +
Sbjct: 199 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 258
Query: 1215 KRAPGKRPTVEECHENRWL 1233
P R T EE + WL
Sbjct: 259 VVDPKARFTTEEALRHPWL 277
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + E Y Q+L + Y+H I H L P ++L++ L+
Sbjct: 97 GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 156
Query: 523 LTDFGLSR 530
+TDFG S+
Sbjct: 157 ITDFGHSK 164
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY-KSLF 227
+ GR+ I D + F +LG G G V+ ERSSG K + +Q
Sbjct: 8 SSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQI 67
Query: 228 KNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLT----RQSYYTEYDIA 283
+ E++++ L H N++++ + +E + I+ E GGELL + R +E +A
Sbjct: 68 EAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA 127
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH-LLLTDFGLSRRITS 334
++Q+++ L Y H + H L P ++L + + DFGL+ S
Sbjct: 128 ELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
A + +++ L Y H + + H +++P+N++ +K+ID G + + H
Sbjct: 127 AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL---FKSDEHS 183
Query: 1008 INTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
N + APEV + F + D+WSAGV+ Y LL+G PF G S E +Q +
Sbjct: 184 TNAAGTALYMAPEVFKRDVTF-KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
Query: 1067 RFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFW 1105
+ + LT +A L + + + A + H W
Sbjct: 243 NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEW 281
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQ-----------APEVLAEEPIFPQ 1156
KDLK E S + I + G+ + LFK+ E APEV + F +
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGL-AELFKSDEHSTNAAGTALYMAPEVFKRDVTF-K 205
Query: 1157 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKR 1216
D+WSAGV+ Y LL+G PF G S E +Q + + + LT +A L + +
Sbjct: 206 CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTK 265
Query: 1217 APGKRPTVEECHENRWL 1233
P +RP+ + + W
Sbjct: 266 DPERRPSAAQVLHHEWF 282
Score = 33.5 bits (75), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 464 GGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
GGELL + R +E +A ++Q+++ L Y H + H L P ++L
Sbjct: 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPH 163
Query: 520 H-LLLTDFGLSRRITS 534
+ + DFGL+ S
Sbjct: 164 SPIKIIDFGLAELFKS 179
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
K + D Y LG G G V A ER + + A K+++ + S + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
++I+ +L H ++++ + ++ +D + I+ EL GGEL + E Y Q+L
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
+ Y+H I H L P ++L++ L+ +TDFG S+
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 947 KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
K+A C +L +QYLH G+ H +++P+NV+++S +K+ D G ++ + +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
+ TP + APEVL D WS GV+ ++ LSG PF
Sbjct: 172 LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 1157 TDVWSAGVLAYVLLSGASPF-RGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIF 1214
D WS GV+ ++ LSG PF +++ + + +Y F ++ E++++A + +
Sbjct: 200 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 259
Query: 1215 KRAPGKRPTVEECHENRWL 1233
P R T EE + WL
Sbjct: 260 VVDPKARFTTEEALRHPWL 278
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + E Y Q+L + Y+H I H L P ++L++ L+
Sbjct: 98 GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 157
Query: 523 LTDFGLSR 530
+TDFG S+
Sbjct: 158 ITDFGHSK 165
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
LG+G G V E+++GR YA K V+ K +L +N ++ H L L
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR--VLQNSRHPFLTAL 73
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHL 304
S++T D + E A GGEL L+R+ ++E Y +++S LDY+H ++ +
Sbjct: 74 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 133
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L +L++ G H+ +TDFGL +
Sbjct: 134 DLKLENLMLDKDG--HIKITDFGLCK 157
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 955 VLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ L YLH + + + +++ +N+++ + +K+ D G + K G + P
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKXF-CGTP 173
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
E+ APEVL + D W GV+ Y ++ G PF Q + + + RF
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL L+R+ ++E Y +++S LDY+H ++ + L +L++ G H+
Sbjct: 92 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIK 149
Query: 523 LTDFGLSR 530
+TDFGL +
Sbjct: 150 ITDFGLCK 157
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + + RF + L
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLG 233
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L + K+ P +R
Sbjct: 234 PEAKSLLSGLLKKDPKQR 251
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 133 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 176
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 169 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 220 RIS----RVEFTFPDFVTEGARDLISRLLKH 246
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDI 233
T +P Y +G+G V A +GR A K++ SL K E+ I
Sbjct: 8 TDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRI 67
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
M L H N+V+L + ET+ + ++ E A GGE+ L E + RQ++S +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 127
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
Y H+ I H L +LL+ G ++ + DFG S T KL+
Sbjct: 128 QYCHQKYIVHRDLKAENLLL--DGDMNIKIADFGFSNEFTVGNKLD 171
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINT 1010
++ +QY H + + H +++ +N+++ + +K+ D G + T KL T
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDG--DMNIKIADFGFSNEFTVGNKLDTF-----C 174
Query: 1011 PNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
+P +AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
Query: 1070 Y 1070
+
Sbjct: 235 F 235
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIF 1214
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR + ++ + L +
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY---MSTDCENLLKKLL 249
Query: 1215 KRAPGKRPTVEECHENRWL 1233
P KR ++E+ ++RW+
Sbjct: 250 VLNPIKRGSLEQIMKDRWM 268
Score = 37.7 bits (86), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L E + RQ++S + Y H+ I H L +LL+ G ++ +
Sbjct: 98 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLL--DGDMNIKI 155
Query: 524 TDFGLSRRITSFGKLN 539
DFG S T KL+
Sbjct: 156 ADFGFSNEFTVGNKLD 171
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ +QY H + + H +++ +N+++ + + +K+ D G + T G + P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFT-FGNKLDAF-CGAP 176
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YL 1071
+AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 236
Query: 1072 FKELTQEATRFLML 1085
+ +FL+L
Sbjct: 237 STDCENLLKKFLIL 250
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQ 236
+P Y +G+G V A +G+ A K++ SL K E+ IM
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
L H N+V+L + ET+ + ++ E A GGE+ L E + RQ++S + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
H+ I H L +LL+ ++ + DFG S T KL+
Sbjct: 130 HQKFIVHRDLKAENLLL--DADMNIKIADFGFSNEFTFGNKLDAF 172
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+ + +FL+L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
P KR T+E+ ++RW+
Sbjct: 251 ---NPSKRGTLEQIMKDRWM 267
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L E + RQ++S + Y H+ I H L +LL+ ++ +
Sbjct: 97 GGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL--DADMNIKI 154
Query: 524 TDFGLSRRITSFGKLNPL 541
DFG S T KL+
Sbjct: 155 ADFGFSNEFTFGNKLDAF 172
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 186 DFGDELGR-GVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
DF + +G G G VY A + + AAKV+ K + + E+DI+ H N+V+
Sbjct: 12 DFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 245 LHDSYETKDSFTIISELAGGGEL-LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
L D++ +++ I+ E GG + L + TE I +Q L L+Y+H I H
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
L G++L G + L DFG+S + T
Sbjct: 132 RDLKAGNILFTLDGD--IKLADFGVSAKNT 159
Score = 37.4 bits (85), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRH 652
P D ++ I E+ G F V KA K T L AAK+ + S + L E D L S H
Sbjct: 10 PEDFWEIIGEL--GDFGKVYKAQNK-ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 66
Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HY 710
I LL+A+ +N+ +L+ GA L TE + + Q + +Y
Sbjct: 67 PNIVKLLDAF---YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 123
Query: 711 LKKNR 715
L N+
Sbjct: 124 LHDNK 128
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 924 VIQWFKLGTSTLCYLPIVIPTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASV 982
+I++ G L + P T V LD L YLH + H +++ N++
Sbjct: 85 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT-- 142
Query: 983 RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-----PIFPQTDVWSAGV 1037
+KL D G + + T+ P + APEV+ E P + DVWS G+
Sbjct: 143 LDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 202
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
TE I +Q L L+Y+H I H L G++L G + L DFG+S + T
Sbjct: 106 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNT 159
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 173
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 166 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 217 RIS----RVEFTFPDFVTEGARDLISRLLKH 243
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 135 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 178
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE + + D+WS GVL Y L G PF + ET +
Sbjct: 171 LCGTL---------DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 222 RIS----RVEFTFPDFVTEGARDLISRLLKH 248
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 247 KHNPSQRPXLREVLEHPWI 265
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI-FKRAPGKRPT-VEECHE 1229
G PF + + + + RF F ++ R L+ + + G P V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLXGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLXGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV +
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVKGRTWXL 198
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
PE+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 199 ----AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLAGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P AL APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEAL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 183
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 184 TDFGFAKRV 192
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
+D G LG+G G VY A ER S A KV+ + + + E++I + L H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 134 IHRDIKPENLLLGSNG--ELKIADFGWSVHAPSSRRDTLCGTLDYL 177
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRDT 169
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 170 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKHEVDW-ITLANNIDH 1102
++ R E+ F + E R L+ + KH +TLA ++H
Sbjct: 221 RIS----RVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEH 261
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1204
PE++ + D+WS GVL Y L G PF + ET + ++ R E+ F +
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS----RVEFTFPDFVT 234
Query: 1205 EATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
E R L+ + K +R T+ E E+ W+
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYQMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 6 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
L Y H + H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 178
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 171 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 222 RIS----RVEFTFPDFVTEGARDLISRLLKH 248
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 247 KHNPSQRPMLREVLEHPWI 265
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ AP ++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L AP ++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APAIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI-FKRAPGK-RPTVEECHE 1229
G PF + + + + RF F ++ R L+ + +A G + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 129 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 172
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 107 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 164
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 165 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 215
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 216 RIS----RVEFTFPDFVTEGARDLI 236
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 240
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 241 KHNPSQRPMLREVLEHPWI 259
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 86
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 147 LDLIYRDLKPENLLIDEQG--YIQVTDFGFAKRV 178
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 129 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDEQGYIQV--TDFGFAKRVK--GRTW 183
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 184 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 241
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 242 VRFPSHFSSDLKDLLRNLLQV 262
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 112 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQG--YIQV 169
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 170 TDFGFAKRV 178
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 170 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 220
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 221 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 280
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 281 HKWFATTDWI 290
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 4 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
L Y H + H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 176
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 169 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 220 RIS----RVEFTFPDFVTEGARDLI 240
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHD 247
D LG G V + + + YA K++ + +S E++++ Q HRN++ L +
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
+E +D F ++ E GG +L + ++ ++ E + + ++ + S LD++H IAH L
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 308 PGDLLVAHPGG-RHLLLTDFGLSRRITSFGKLNPL 341
P ++L HP + + DF L I G +P+
Sbjct: 139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI 173
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 18/117 (15%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA---SVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
V V L +LH +G+ H +++P+N++ V V++ DLG KL PI
Sbjct: 117 VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG---SGIKLNGDCSPI 173
Query: 1009 NTP-------NPEFAAPEVLA----EEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQS 1053
+TP + E+ APEV+ E I+ + D+WS GV+ Y+LLSG PF G+
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLL 522
GG +L + ++ ++ E + + ++ + S LD++H IAH L P ++L HP +
Sbjct: 95 GGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVK 154
Query: 523 LTDFGLSRRITSFGKLNPL 541
+ DF L I G +P+
Sbjct: 155 ICDFDLGSGIKLNGDCSPI 173
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 1144 APEVLA----EEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQS 1180
APEV+ E I+ + D+WS GV+ Y+LLSG PF G+
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
+D YDF ++G G G+ ++ + A K + +G + E+ L H N
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPN 77
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+VR + T II E A GGEL + ++E + + +QLLSG+ Y H + I
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
H L + L+ L + DFG S+
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSK 166
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINT-P 1011
+L G+ Y H +CH +++ +N ++ + ++K+ D G ++ +++H P +T
Sbjct: 125 LLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVG 179
Query: 1012 NPEFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEP----ETRQNVNFVRY 1066
P + APEVL + + DVWS GV YV+L GA PF EP +T Q + V+Y
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY 239
Query: 1067 RFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK----DLKRETN 1115
+ ++ E + IF + I W +K DL E+N
Sbjct: 240 SIPDDIR-ISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESN 291
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
G+S+ + + K+ P +A E + Q DVWS GV YV+L GA PF
Sbjct: 163 GYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222
Query: 1181 EP----ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL--- 1233
EP +T Q + V+Y + ++ E + IF P R ++ E + W
Sbjct: 223 EPRDYRKTIQRILSVKYSIPDDIR-ISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281
Query: 1234 VPSEYM 1239
+P++ M
Sbjct: 282 LPADLM 287
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + ++E + + +QLLSG+ Y H + I H L + L+ L +
Sbjct: 100 GGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKI 159
Query: 524 TDFGLSR 530
DFG S+
Sbjct: 160 CDFGYSK 166
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Query: 582 VEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVN 641
V P++ +D+Y F+ +I G F V +K T+ LVA K E V
Sbjct: 6 VTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQ 64
Query: 642 TEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVAT 701
E N RSLRH I E T +++A+ +ME G ++ + + ++E
Sbjct: 65 REIINHRSLRHPNIVRFKEVI---LTPTHLAI-IMEYASGGELYERICNAGRFSEDEARF 120
Query: 702 IISQ 705
Q
Sbjct: 121 FFQQ 124
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 2 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
L Y H + H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSCHAPSSRRTTLSGTLDYL 174
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC----TQRVTKL 1001
+ A +T + + L Y H + + H +I+P+N+++ S +++ C ++R T
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS 168
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
GTL ++ PE++ + D+WS GVL Y L G PF + ET + +
Sbjct: 169 GTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 1062 NFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
+ R E+ F + E R L+ + KH
Sbjct: 220 S----RVEFTFPDFVTEGARDLISRLLKH 244
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 242
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 243 KHNPSQRPMLREVLEHPWI 261
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
K + D Y LG G G V A ER + + A ++++ + S + E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
++I+ +L H ++++ + ++ +D + I+ EL GGEL + E Y Q+L
Sbjct: 191 IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 249
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
+ Y+H I H L P ++L++ L+ +TDFG S+
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 947 KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
K+A C +L +QYLH G+ H +++P+NV+++S +K+ D G ++ + +
Sbjct: 237 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 296
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
+ TP + APEVL D WS GV+ ++ LSG PF
Sbjct: 297 LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 1135 SALFKTKEQAPEVLAEEPIFP--------QTDVWSAGVLAYVLLSGASPF-RGQSEPETR 1185
++L +T P LA E + D WS GV+ ++ LSG PF +++ +
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 354
Query: 1186 QNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ +Y F ++ E++++A + + P R T EE + WL
Sbjct: 355 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + E Y Q+L + Y+H I H L P ++L++ L+
Sbjct: 223 GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 282
Query: 523 LTDFGLSR 530
+TDFG S+
Sbjct: 283 ITDFGHSK 290
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 120
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 181 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 212
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TK 1000
H Y VL +YLH L + +++P+N+++ +QV D G +RV T
Sbjct: 163 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVKGATWTL 219
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GT PE+ APE++ + D W+ GVL Y + +G PF + +
Sbjct: 220 CGT---------PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 270
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLI 1086
+ + RF F ++ R L+ +
Sbjct: 271 IVSGKVRFPSHFSSDLKDLLRNLLQV 296
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 146 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 203
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 204 TDFGFAKRV 212
Score = 37.4 bits (85), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W+ G P L APE++ + D W+ GVL Y + +
Sbjct: 204 TDFGF---AKRVKGATWTLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 255 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 314
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 315 HKWFATTDWI 324
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 94
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 155 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 186
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 137 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 191
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 192 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 249
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 250 VRFPSHFSSDLKDLLRNLLQV 270
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 120 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 177
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 178 TDFGFAKRV 186
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 178 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 228
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 229 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 288
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 289 HKWFATTDWI 298
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine
At 2a Resolution
Length = 345
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLI 1005
+ + ++ GLQ+LH +G+ + +++ DN+++ + +K+ D G C + + LG
Sbjct: 119 RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD--KDGHIKIADFGMCKENM--LGDAK 174
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
P++ APE+L + D WS GVL Y +L G SPF GQ E E + +R
Sbjct: 175 TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS---IR 231
Query: 1066 YRFEYLFKELTQEATRFLMLIFKHE 1090
+ + L +EA L+ +F E
Sbjct: 232 MDNPFYPRWLEKEAKDLLVKLFVRE 256
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+L + D WS GVL Y +L G SPF GQ E E + +R + + L
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS---IRMDNPFYPRWLE 242
Query: 1204 QEATRFLMLIFKRAPGKR 1221
+EA L+ +F R P KR
Sbjct: 243 KEAKDLLVKLFVREPEKR 260
Score = 37.7 bits (86), Expect = 0.040, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H L + +++TK++ + E GG+L++ + + Y +++ GL ++H
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I + L ++L+ G H+ + DFG+ +
Sbjct: 137 KGIVYRDLKLDNILLDKDG--HIKIADFGMCK 166
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 134 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 177
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 169
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 170 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 220
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 221 RIS----RVEFTFPDFVTEGARDLI 241
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 245
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 246 KHNPSQRPMLREVLEHPWI 264
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN---LVR 244
+GRG G VY + +G+ YA K + K Q ++L NE +++ + + +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ ++ T D + I +L GG+L + L++ ++E D+ Y +++ GL++MH + +
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
L P ++L+ G H+ ++D GL+ F K P
Sbjct: 317 DLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 347
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L + L++ ++E D+ Y +++ GL++MH + + L P ++L+ G H+ +
Sbjct: 276 GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRI 333
Query: 524 TDFGLSRRITSFGKLNP 540
+D GL+ F K P
Sbjct: 334 SDLGLA---CDFSKKKP 347
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ GL+++H R + + +++P N+++ V++ + L C K +
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----S 350
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVW-SAGVLAYVLLSGASPFR 1050
+ APEVL + + + W S G + + LL G SPFR
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN---LVR 244
+GRG G VY + +G+ YA K + K Q ++L NE +++ + + +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ ++ T D + I +L GG+L + L++ ++E D+ Y +++ GL++MH + +
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
L P ++L+ G H+ ++D GL+ F K P
Sbjct: 317 DLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 347
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L + L++ ++E D+ Y +++ GL++MH + + L P ++L+ G H+ +
Sbjct: 276 GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRI 333
Query: 524 TDFGLSRRITSFGKLNP 540
+D GL+ F K P
Sbjct: 334 SDLGLA---CDFSKKKP 347
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ GL+++H R + + +++P N+++ V++ + L C K +
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----S 350
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVW-SAGVLAYVLLSGASPFR 1050
+ APEVL + + + W S G + + LL G SPFR
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN---LVR 244
+GRG G VY + +G+ YA K + K Q ++L NE +++ + + +V
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ ++ T D + I +L GG+L + L++ ++E D+ Y +++ GL++MH + +
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 315
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
L P ++L+ G H+ ++D GL+ F K P
Sbjct: 316 DLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 346
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L + L++ ++E D+ Y +++ GL++MH + + L P ++L+ G H+ +
Sbjct: 275 GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRI 332
Query: 524 TDFGLSRRITSFGKLNP 540
+D GL+ F K P
Sbjct: 333 SDLGLA---CDFSKKKP 346
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ GL+++H R + + +++P N+++ V++ + L C K +
Sbjct: 295 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----S 349
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVW-SAGVLAYVLLSGASPFR 1050
+ APEVL + + + W S G + + LL G SPFR
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 391
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN---LVR 244
+GRG G VY + +G+ YA K + K Q ++L NE +++ + + +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ ++ T D + I +L GG+L + L++ ++E D+ Y +++ GL++MH + +
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
L P ++L+ G H+ ++D GL+ F K P
Sbjct: 317 DLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 347
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L + L++ ++E D+ Y +++ GL++MH + + L P ++L+ G H+ +
Sbjct: 276 GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRI 333
Query: 524 TDFGLSRRITSFGKLNP 540
+D GL+ F K P
Sbjct: 334 SDLGLA---CDFSKKKP 347
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ GL+++H R + + +++P N+++ V++ + L C K +
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----S 350
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVW-SAGVLAYVLLSGASPFR 1050
+ APEVL + + + W S G + + LL G SPFR
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
+D Y+ ++G G G+ ++ S A K + +G + + K E+ L H N
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPN 76
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+VR + T I+ E A GGEL + ++E + + +QL+SG+ Y H + +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
H L + L+ L + DFG S+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSK 165
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINT-P 1011
++ G+ Y H +CH +++ +N ++ + ++K+ D G ++ +++H P +T
Sbjct: 124 LISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVG 178
Query: 1012 NPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPE 1056
P + APEVL ++ + DVWS GV YV+L GA PF EP+
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK 224
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
G+S+ + + K+ P +A E + + DVWS GV YV+L GA PF
Sbjct: 162 GYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
Query: 1181 EPETRQNVNFVRYRFEYLFKE---LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---V 1234
EP+ + +Y + ++ E + IF P KR ++ E + W +
Sbjct: 222 EPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
Query: 1235 PSEYM 1239
P++ M
Sbjct: 282 PADLM 286
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFD 645
P++ +D+Y+ + +I G F V +K + E LVA K E V E
Sbjct: 9 PMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNE-LVAVKYIERGEKIAANVKREII 67
Query: 646 NLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
N RSLRH I E T +++A+ VME G ++ + + ++E Q
Sbjct: 68 NHRSLRHPNIVRFKEVI---LTPTHLAI-VMEYASGGELFERICNAGRFSEDEARFFFQQ 123
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + ++E + + +QL+SG+ Y H + + H L + L+ L +
Sbjct: 99 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 158
Query: 524 TDFGLSR 530
DFG S+
Sbjct: 159 CDFGYSK 165
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +L++ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLIIDQQG--YIQVTDFGFAKRV 191
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLIIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +L++ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIIISKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 2 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
L Y H + H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRDTLCGTLDYL 174
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRDT 166
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 167 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 218 RIS----RVEFTFPDFVTEGARDLISRLLKH 244
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 242
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 243 KHNPSQRPMLREVLEHPWI 261
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
K + D Y LG G G V A ER + + A ++++ + S + E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
++I+ +L H ++++ + ++ +D + I+ EL GGEL + E Y Q+L
Sbjct: 205 IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 263
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
+ Y+H I H L P ++L++ L+ +TDFG S+
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 947 KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
K+A C +L +QYLH G+ H +++P+NV+++S +K+ D G ++ + +
Sbjct: 251 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 310
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
+ TP + APEVL D WS GV+ ++ LSG PF
Sbjct: 311 LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 1135 SALFKTKEQAPEVLAEEPIFP--------QTDVWSAGVLAYVLLSGASPF-RGQSEPETR 1185
++L +T P LA E + D WS GV+ ++ LSG PF +++ +
Sbjct: 309 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 368
Query: 1186 QNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ +Y F ++ E++++A + + P R T EE + WL
Sbjct: 369 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 417
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + E Y Q+L + Y+H I H L P ++L++ L+
Sbjct: 237 GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 296
Query: 523 LTDFGLSR 530
+TDFG S+
Sbjct: 297 ITDFGHSK 304
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
+D Y+ ++G G G+ ++ + A K + +G + K E+ L H N
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+VR + T I+ E A GGEL + ++E + + +QL+SG+ Y H + +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
AH L + L+ L + DFG S+
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSK 165
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ G+ Y H + H +++ +N ++ + ++K+ D G ++ +
Sbjct: 119 FFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVG 178
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPET 1057
TP + APEVL ++ + DVWS GV YV+L GA PF EP+
Sbjct: 179 TP--AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
G+S+ + + K+ P +A E + + DVWS GV YV+L GA PF
Sbjct: 162 GYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
Query: 1181 EPETRQNVNFVRYRFEYLFKE---LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---V 1234
EP+ + +Y + ++ E + IF P KR ++ E + W +
Sbjct: 222 EPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
Query: 1235 PSEYM 1239
P++ M
Sbjct: 282 PADLM 286
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + ++E + + +QL+SG+ Y H + +AH L + L+ L +
Sbjct: 99 GGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKI 158
Query: 524 TDFGLSR 530
DFG S+
Sbjct: 159 ADFGYSK 165
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 5/120 (4%)
Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFD 645
P++ +D+Y+ + +I G F V +K E LVA K E V E
Sbjct: 9 PMDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANE-LVAVKYIERGEKIDENVKREII 67
Query: 646 NLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
N RSLRH I E T +++A+ VME G ++ + + ++E Q
Sbjct: 68 NHRSLRHPNIVRFKEVI---LTPTHLAI-VMEYASGGELFERICNAGRFSEDEARFFFQQ 123
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFA 1016
GL +LH RG+ + +++ DNV++ S +K+ D G C + + T TP+ +
Sbjct: 132 GLFFLHKRGIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMMDGVTTREFCGTPD--YI 187
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
APE++A +P D W+ GVL Y +L+G PF G+ E E Q++
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 232
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE++A +P D W+ GVL Y +L+G PF G+ E E Q++ + + Y K L+
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI--MEHNVSYP-KSLS 244
Query: 1204 QEATRFLMLIFKRAPGKR 1221
+EA + + P KR
Sbjct: 245 KEAVSICKGLMTKHPAKR 262
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
+TD ++F LG+G G V A + + YA K++ K + + D+ + +
Sbjct: 18 LTD-FNFLMVLGKGSFGKVMLADRKGTEELYAIKILK------KDVVIQDDDVECTMVEK 70
Query: 241 N----------LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
L +LH ++T D + E GG+L++ + + + E Y ++
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 130
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
GL ++H+ I + L ++++ G H+ + DFG+ +
Sbjct: 131 IGLFFLHKRGIIYRDLKLDNVMLDSEG--HIKIADFGMCK 168
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L++ + + + E Y ++ GL ++H+ I + L ++++ G H+ +
Sbjct: 104 GGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEG--HIKI 161
Query: 524 TDFGLSR 530
DFG+ +
Sbjct: 162 ADFGMCK 168
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E++S A KV+ + + + E++I + L H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR G L+ L
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRAALCGTLDYL 173
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 108 QRTATYITELANALSYCHSKKVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRAA 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + +T +
Sbjct: 166 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 217 RIS----RVEFTFPDFVTEGARDLI 237
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 1126 IGWSEKGIPS---ALFKTKEQAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1181
GWS S AL T + P + E + + D+WS GVL Y L G PF +
Sbjct: 152 FGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 1182 PETRQNVNFVRYRFEYLFKELTQEATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
+T + ++ R E+ F + E R L+ + K P +RP + E E+ W+
Sbjct: 212 QDTYKRIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D +D LG G G V + SG +YA K++ K Q + NE I+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 120
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 181 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 212
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 163 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 217
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 218 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 275
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 276 VRFPSHFSSDLKDLLRNLLQV 296
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 146 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 203
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 204 TDFGFAKRV 212
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 204 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 255 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 314
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 315 HKWFATTDWI 324
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ +QY H + + H +++ +N+++ + +K+ D G + T G + P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDA--DXNIKIADFGFSNEFT-FGNKLDAF-CGAP 176
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
+AAPE+ ++ P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR +
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 4/165 (2%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQ 236
+P Y +G+G V A +G+ A K++ SL K E+ I
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKV 69
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
L H N+V+L + ET+ + ++ E A GGE+ L E + RQ++S + Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYC 129
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
H+ I H L +LL+ ++ + DFG S T KL+
Sbjct: 130 HQKFIVHRDLKAENLLL--DADXNIKIADFGFSNEFTFGNKLDAF 172
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y + +FL+L
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRW 1232
P KR T+E+ ++RW
Sbjct: 251 ---NPSKRGTLEQIXKDRW 266
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L E + RQ++S + Y H+ I H L +LL+ ++ +
Sbjct: 97 GGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL--DADXNIKI 154
Query: 524 TDFGLSRRITSFGKLNPL 541
DFG S T KL+
Sbjct: 155 ADFGFSNEFTFGNKLDAF 172
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 3 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
L Y H + H + P +LL+ G L + DFG S
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 157
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 110 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRXX 167
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 168 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 219 RIS----RVEFTFPDFVTEGARDLISRLLKH 245
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 243
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 244 KHNPSQRPMLREVLEHPWI 262
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---F 227
G + + + + ++ G LG+G G VY A E+ S A KV+ + +
Sbjct: 1 GSHMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 228 KNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIR 287
+ E++I + L H N++RL+ + +I E A G + L + S + E A YI
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+L + L Y H + H + P +LL+ G L + DFG S
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 160
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTD 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 171 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 222 RIS----RVEFTFPDFVTEGARDLI 242
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 247 KHNPSQRPMLREVLEHPWI 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 3 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
L Y H + H + P +LL+ G L + +FG SRR T G L+ L
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIANFGWSVHAPSSRRTTLCGTLDYL 175
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ + G ++R T
Sbjct: 110 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIANFGWSVHAPSSRRTT 167
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 168 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 219 RIS----RVEFTFPDFVTEGARDLISRLLKH 245
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 243
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 244 KHNPSQRPMLREVLEHPWI 262
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLI 1005
+ + ++ GLQ+LH +G+ + +++ DN+++ + +K+ D G C + + LG
Sbjct: 120 RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD--KDGHIKIADFGMCKENM--LGDAK 175
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
P++ APE+L + D WS GVL Y +L G SPF GQ E E + +R
Sbjct: 176 TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS---IR 232
Query: 1066 YRFEYLFKELTQEATRFLMLIFKHE 1090
+ + L +EA L+ +F E
Sbjct: 233 MDNPFYPRWLEKEAKDLLVKLFVRE 257
Score = 50.4 bits (119), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+L + D WS GVL Y +L G SPF GQ E E + +R + + L
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS---IRMDNPFYPRWLE 243
Query: 1204 QEATRFLMLIFKRAPGKR 1221
+EA L+ +F R P KR
Sbjct: 244 KEAKDLLVKLFVREPEKR 261
Score = 37.7 bits (86), Expect = 0.044, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H L + +++TK++ + E GG+L++ + + Y +++ GL ++H
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I + L ++L+ G H+ + DFG+ +
Sbjct: 138 KGIVYRDLKLDNILLDKDG--HIKIADFGMCK 167
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H + P +LL+ G L + DFG S
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWS 155
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTE 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 166 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 217 RIS----RVEFTFPDFVTEGARDLISRLLKH 243
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 1 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
L Y H + H + P +LL+ G L + DFG S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 155
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTD 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 166 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 217 RIS----RVEFTFPDFVTEGARDLI 237
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 2 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
L Y H + H + P +LL+ G L + DFG S
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 156
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTD 166
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 167 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 218 RIS----RVEFTFPDFVTEGARDLISRLLKH 244
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 242
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 243 KHNPSQRPMLREVLEHPWI 261
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
+D Y+ ++G G G+ ++ S A K + +G + K E+ L H N
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 75
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+VR + T I+ E A GGEL + ++E + + +QL+SG+ Y H + +
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
H L + L+ L + DFG S+
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSK 164
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINTPN 1012
++ G+ Y H +CH +++ +N ++ + ++K+ D G ++ +++H P +T
Sbjct: 123 LISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVG 177
Query: 1013 -PEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
P + APEVL ++ + DVWS GV YV+L GA PF EP+ + +Y
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 237
Query: 1071 LFKE---LTQEATRFLMLIFKHE-VDWITLANNIDHEFWHVK----DLKRETNYTFRLSA 1122
+ ++ E + IF + I++ +HE W +K DL + T + +A
Sbjct: 238 AIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHE-WFLKNLPADLMNDNTMTTQFAA 296
Query: 1123 KNVIGWS 1129
+ G S
Sbjct: 297 SDQPGQS 303
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
G+S+ + + K+ P +A E + + DVWS GV YV+L GA PF
Sbjct: 161 GYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
Query: 1181 EPETRQNVNFVRYRFEYLFKE---LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---V 1234
EP+ + +Y + ++ E + IF P KR ++ E + W +
Sbjct: 221 EPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 280
Query: 1235 PSEYM 1239
P++ M
Sbjct: 281 PADLM 285
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHER 654
+D+Y+ + +I G F V +K + E LVA K E V E N RSLRH
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNE-LVAVKYIERGEKIDENVKREIINHRSLRHPN 75
Query: 655 IASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
I E T +++A+ VME G ++ + + ++E Q
Sbjct: 76 IVRFKEVI---LTPTHLAI-VMEYASGGELFERICNAGRFSEDEARFFFQQ 122
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + ++E + + +QL+SG+ Y H + + H L + L+ L +
Sbjct: 98 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 157
Query: 524 TDFGLSR 530
DFG S+
Sbjct: 158 CDFGYSK 164
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 4 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
L Y H + H + P +LL+ G L + +FG SRR T G L+ L
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIANFGWSVHAPSSRRTTLCGTLDYL 176
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ + G ++R T
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIANFGWSVHAPSSRRTT 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 169 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 220 RIS----RVEFTFPDFVTEGARDLI 240
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 70
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 131 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 161
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 114 FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 171
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 172 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 229
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 230 DFPEKFFPKARDLVEKLLVL 249
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 239
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 240 RDLVEKLLVL 249
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 95 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 152
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 153 DFGTAKVLS 161
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR G L+ L
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRAALCGTLDYL 173
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRAA 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 166 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 217 RIS----RVEFTFPDFVTEGARDLI 237
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 1126 IGWSEKGIPS---ALFKTKEQAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1181
GWS S AL T + P + E + + D+WS GVL Y L G PF +
Sbjct: 152 FGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 1182 PETRQNVNFVRYRFEYLFKELTQEATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
ET + ++ R E+ F + E R L+ + K P +RP + E E+ W+
Sbjct: 212 QETYKRIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H + P +LL+ G L + DFG S
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWS 155
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTD 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 166 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 217 RIS----RVEFTFPDFVTEGARDLI 237
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 69
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 130 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 160
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 113 FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 170
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 171 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 228
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 229 DFPEKFFPKARDLVEKLLVL 248
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 238
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 239 RDLVEKLLVL 248
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 94 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 151
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 152 DFGTAKVLS 160
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR G L+ L
Sbjct: 133 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRAALCGTLDYL 176
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRAA 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 169 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
++ R E+ F + E R L+ + KH
Sbjct: 220 RIS----RVEFTFPDFVTEGARDLISRLLKH 246
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 1126 IGWSEKGIPS---ALFKTKEQAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1181
GWS S AL T + P + E + + D+WS GVL Y L G PF +
Sbjct: 155 FGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 1182 PETRQNVNFVRYRFEYLFKELTQEATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
ET + ++ R E+ F + E R L+ + K P +RP + E E+ W+
Sbjct: 215 QETYKRIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-----FKNELDIMNQLCH 239
Y GD LG G G V +G A K++ + + +SL + E+ + H
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQ--KIRSLDVVGKIRREIQNLKLFRH 75
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
++++L+ T ++ E GGEL + + E + +Q+LSG+DY HR
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 300 SIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRIT 333
+ H L P ++L+ AH + + DFGLS ++
Sbjct: 136 MVVHRDLKPENVLLDAHMNAK---IADFGLSNMMS 167
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L G+ Y H + H +++P+NV++ + + K+ D G + ++ L +PN
Sbjct: 125 ILSGVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMSDGEFLRXSCGSPN-- 180
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
+AAPEV++ P+ D+WS+GV+ Y LL G PF P
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP 222
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-NFVRYRFEYLFKE 1201
APEV++ P+ D+WS+GV+ Y LL G PF P + + + + Y +Y
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY---- 238
Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
L L + + P KR T+++ E+ W
Sbjct: 239 LNPSVISLLKHMLQVDPMKRATIKDIREHEWF 270
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + + E + +Q+LSG+DY HR + H L P ++L+ AH +
Sbjct: 100 GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAK--- 156
Query: 523 LTDFGLSRRIT 533
+ DFGLS ++
Sbjct: 157 IADFGLSNMMS 167
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 613 VKAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTA 668
VK + T + VA K+ S D + ++ E NL+ RH I L Y+ +T
Sbjct: 32 VKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL---YQVISTP 88
Query: 669 SNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
S+I +VME + G ++ Y+ E+ + Q
Sbjct: 89 SDI-FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ 124
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 173 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 146
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 147 SDFGLA 152
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ A KV+ + + + E++I + L H N
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
H + P +LL+ G L + DFG SRR T G L+ L
Sbjct: 127 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 170
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R T
Sbjct: 105 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 162
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 163 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 213
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 214 RIS----RVEFTFPDFVTEGARDLI 234
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 238
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 239 KHNPSQRPMLREVLEHPWI 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H + P +LL+ G L + DFG S
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWS 155
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRXX 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 166 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 217 RIS----RVEFTFPDFVTEGARDLI 237
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
K R + D ++ G LG+G G VY A E+ S A KV+ + + + E+
Sbjct: 4 KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+I + L H N++RL+ + +I E A G + L + S + E A YI +L +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
L Y H + H + P +LL+ G L + DFG S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 158
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRXX 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 169 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 220 RIS----RVEFTFPDFVTEGARDLI 240
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSXQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H + P +LL+ G L + DFG S
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWS 155
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTX 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 166 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 217 RIS----RVEFTFPDFVTEGARDLI 237
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 242 KHNPSQRPMLREVLEHPWI 260
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 67
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 128 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 158
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 111 FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 168
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 169 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 226
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 227 DFPEKFFPKARDLVEKLLVL 246
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 236
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 237 RDLVEKLLVL 246
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 92 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 149
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 150 DFGTAKVLS 158
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 68
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 129 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 159
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 112 FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 169
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 170 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 227
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 228 DFPEKFFPKARDLVEKLLVL 247
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 237
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 238 RDLVEKLLVL 247
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 93 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 150
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 151 DFGTAKVLS 159
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-H 239
+D Y + +G G V +++ YA KV+ ++ K E++I+ + H
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI----DKSKRDPSEEIEILLRYGQH 80
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
N++ L D Y+ +++EL GGELL + RQ +++E + + + + ++Y+H
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 300 SIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
+ H L P ++L G L + DFG ++++
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNV--VMASVRSVQVKLIDLGCTQRV-TKLGTLI 1005
++ + ++ ++YLH +G+ H +++P N+ V S +++ D G +++ + G L+
Sbjct: 124 SFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM 183
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P T N F APEVL + D+WS G+L Y +L+G +PF
Sbjct: 184 TPCYTAN--FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHL 521
GGELL + RQ +++E + + + + ++Y+H + H L P ++L G L
Sbjct: 105 GGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECL 164
Query: 522 LLTDFGLSRRI 532
+ DFG ++++
Sbjct: 165 RICDFGFAKQL 175
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEVL + D+WS G+L Y +L+G +PF
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 2 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 61
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 122 IGITHRDIKPENLLLDERD--NLKISDFGLA 150
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 111 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 171 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 87 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 144
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 145 SDFGLA 150
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 230
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 231 KIDSAPLALLHKILVENPSARITIPDIKKDRW 262
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 173 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 146
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 147 SDFGLA 152
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-H 239
+D Y + +G G V +++ YA KV+ ++ K E++I+ + H
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI----DKSKRDPSEEIEILLRYGQH 80
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
N++ L D Y+ +++EL GGELL + RQ +++E + + + + ++Y+H
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 300 SIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
+ H L P ++L G L + DFG ++++
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRV-TKLGTLI 1005
++ + ++ ++YLH +G+ H +++P N++ S +++ D G +++ + G L+
Sbjct: 124 SFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM 183
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P T N F APEVL + D+WS G+L Y +L+G +PF
Sbjct: 184 TPCYTAN--FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHL 521
GGELL + RQ +++E + + + + ++Y+H + H L P ++L G L
Sbjct: 105 GGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECL 164
Query: 522 LLTDFGLSRRI 532
+ DFG ++++
Sbjct: 165 RICDFGFAKQL 175
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEVL + D+WS G+L Y +L+G +PF
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
++ G LG+G G VY A E+ S A KV+ + + + E++I + L H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
++RL+ + +I E A G + L + S + E A YI +L + L Y H +
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H + P +LL+ G L + DFG S
Sbjct: 133 IHRDIKPENLLLGSAG--ELKIADFGWS 158
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
+ A +T + + L Y H + + H +I+P+N+++ S + ++K+ D G ++R
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRDD 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GTL ++ PE++ + D+WS GVL Y L G PF + ET +
Sbjct: 169 LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
++ R E+ F + E R L+
Sbjct: 220 RIS----RVEFTFPDFVTEGARDLI 240
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
+ D+WS GVL Y L G PF + ET + ++ R E+ F + E R L+ +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
K P +RP + E E+ W+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-----FKNELDIMNQLCH 239
Y GD LG G G V + +G A K++ + + +SL K E+ + H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ--KIRSLDVVGKIKREIQNLKLFRH 70
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
++++L+ T F ++ E GGEL + + E + +Q+LS +DY HR
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 300 SIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRIT 333
+ H L P ++L+ AH + + DFGLS ++
Sbjct: 131 MVVHRDLKPENVLLDAHMNAK---IADFGLSNMMS 162
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
+L + Y H + H +++P+NV++ + + K+ D G + ++ L +PN
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMSDGEFLRTSCGSPN- 175
Query: 1014 EFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-NFVRYRFEYL 1071
+AAPEV++ P+ D+WS GV+ Y LL G PF + P + + V Y EYL
Sbjct: 176 -YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL 234
Query: 1072 FKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDL 1110
+ + AT + ++ + T+ + +HE W +DL
Sbjct: 235 NRSV---ATLLMHMLQVDPLKRATIKDIREHE-WFKQDL 269
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV++ P+ D+WS GV+ Y LL G PF + P + +R Y+ + L
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK---IRGGVFYIPEYL 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ LM + + P KR T+++ E+ W
Sbjct: 235 NRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + + E + +Q+LS +DY HR + H L P ++L+ AH +
Sbjct: 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK--- 151
Query: 523 LTDFGLSRRIT 533
+ DFGLS ++
Sbjct: 152 IADFGLSNMMS 162
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 613 VKAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTA 668
VK E T + VA K+ S D + ++ E NL+ RH I L Y+ +T
Sbjct: 27 VKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL---YQVISTP 83
Query: 669 SNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++ +VME + G ++ Y+ E + Q
Sbjct: 84 TDF-FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ 119
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
+ ++ ELG G G VY A + +G AAKV+ K + + E++I+ H +
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 243 VRLHDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
V+L +Y I+ E GG ++ L R TE I RQ+L L+++H
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSK 136
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
I H L G++L+ G + L DFG+S +
Sbjct: 137 RIIHRDLKAGNVLMTLEGD--IRLADFGVSAK 166
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-LGTLIHPINTP-- 1011
+L+ L +LH + + H +++ NV+M ++L D G + + K L I TP
Sbjct: 126 MLEALNFLHSKRIIHRDLKAGNVLMT--LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYW 183
Query: 1012 -NPEFAAPEVLAEEPIFPQTDVWSAGV 1037
PE E + + P + D+WS G+
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGI 210
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 463 PGGE---LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
PGG ++ L R TE I RQ+L L+++H I H L G++L+ G
Sbjct: 99 PGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD- 155
Query: 520 HLLLTDFGLSRR 531
+ L DFG+S +
Sbjct: 156 -IRLADFGVSAK 166
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDE--RDNLKISDFGLA 151
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDE--RDNLKISDFGLA 151
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
+ ++ ELG G G VY A + +G AAKV+ K + + E++I+ H +
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 243 VRLHDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
V+L +Y I+ E GG ++ L R TE I RQ+L L+++H
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSK 128
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
I H L G++L+ G + L DFG+S +
Sbjct: 129 RIIHRDLKAGNVLMTLEG--DIRLADFGVSAK 158
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 463 PGGE---LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
PGG ++ L R TE I RQ+L L+++H I H L G++L+ G
Sbjct: 91 PGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-- 146
Query: 520 HLLLTDFGLSRR 531
+ L DFG+S +
Sbjct: 147 DIRLADFGVSAK 158
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-LGTLIHPINTP-- 1011
+L+ L +LH + + H +++ NV+M ++L D G + + K L I TP
Sbjct: 118 MLEALNFLHSKRIIHRDLKAGNVLMT--LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYW 175
Query: 1012 -NPEFAAPEVLAEEPIFPQTDVWSAGV 1037
PE E + + P + D+WS G+
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGI 202
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-----FKNELDIMNQLCH 239
Y GD LG G G V + +G A K++ + + +SL K E+ + H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ--KIRSLDVVGKIKREIQNLKLFRH 70
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
++++L+ T F ++ E GGEL + + E + +Q+LS +DY HR
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 300 SIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRIT 333
+ H L P ++L+ AH + + DFGLS ++
Sbjct: 131 MVVHRDLKPENVLLDAHMNAK---IADFGLSNMMS 162
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
+L + Y H + H +++P+NV++ + + K+ D G + ++ L +PN
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMSDGEFLRDSCGSPN- 175
Query: 1014 EFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-NFVRYRFEYL 1071
+AAPEV++ P+ D+WS GV+ Y LL G PF + P + + V Y EYL
Sbjct: 176 -YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL 234
Query: 1072 FKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDL 1110
+ + AT + ++ + T+ + +HE W +DL
Sbjct: 235 NRSV---ATLLMHMLQVDPLKRATIKDIREHE-WFKQDL 269
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV++ P+ D+WS GV+ Y LL G PF + P + +R Y+ + L
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK---IRGGVFYIPEYL 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ LM + + P KR T+++ E+ W
Sbjct: 235 NRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLL 522
GGEL + + E + +Q+LS +DY HR + H L P ++L+ AH +
Sbjct: 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK--- 151
Query: 523 LTDFGLSRRIT 533
+ DFGLS ++
Sbjct: 152 IADFGLSNMMS 162
Score = 33.5 bits (75), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 613 VKAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTA 668
VK E T + VA K+ S D + ++ E NL+ RH I L Y+ +T
Sbjct: 27 VKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL---YQVISTP 83
Query: 669 SNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++ +VME + G ++ Y+ E + Q
Sbjct: 84 TDF-FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ 119
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDE--RDNLKISDFGLA 151
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 173 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 146
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 147 SDFGLA 152
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 173 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 146
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 147 SDFGLA 152
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 173 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 146
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 147 SDFGLA 152
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDE--RDNLKISDFGLA 151
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP- 171
Query: 1015 FAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP- 172
Query: 1015 FAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 146
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 147 SDFGLA 152
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 172 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 145
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 146 SDFGLA 151
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 231
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 232 KIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN 241
Y LG G G V A ++G+ A K++ K + + + E+ + L H +
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+++L+D ++KD ++ E AG EL + ++ +E + + +Q++S ++Y HR I
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 302 AHLGLTPGDLLVAHPGGRHL--LLTDFGLSRRIT 333
H L P +LL+ HL + DFGLS +T
Sbjct: 125 VHRDLKPENLLL----DEHLNVKIADFGLSNIMT 154
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ ++Y H + H +++P+N+++ + VK+ D G + +T L +PN
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDE--HLNVKIADFGLSNIMTDGNFLKTSCGSPN-- 167
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
+AAPEV++ + P+ DVWS GV+ YV+L PF +S P +N++
Sbjct: 168 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 216
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV++ + P+ DVWS GV+ YV+L PF +S P +N++ Y L K L
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT---LPKFL 226
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ A + + P R ++ E ++ W
Sbjct: 227 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 257
Score = 38.5 bits (88), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL-- 521
G EL + ++ +E + + +Q++S ++Y HR I H L P +LL+ HL
Sbjct: 87 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL----DEHLNV 142
Query: 522 LLTDFGLSRRIT 533
+ DFGLS +T
Sbjct: 143 KIADFGLSNIMT 154
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 173 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 146
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 147 SDFGLA 152
Score = 33.9 bits (76), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFA 1016
GL +L +G+ + +++ DNV++ S +K+ D G C + + T TP+ +
Sbjct: 133 GLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPD--YI 188
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
APE++A +P D W+ GVL Y +L+G +PF G+ E E Q++
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE++A +P D W+ GVL Y +L+G +PF G+ E E Q++ + + Y K ++
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI--MEHNVAYP-KSMS 245
Query: 1204 QEATRFLMLIFKRAPGKR 1221
+EA + + PGKR
Sbjct: 246 KEAVAICKGLMTKHPGKR 263
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
+TD ++F LG+G G V + + + YA K++ K + + D+ + +
Sbjct: 19 LTD-FNFLMVLGKGSFGKVMLSERKGTDELYAVKILK------KDVVIQDDDVECTMVEK 71
Query: 241 N----------LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
L +LH ++T D + E GG+L++ + + + E Y ++
Sbjct: 72 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA 131
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
GL ++ I + L ++++ G H+ + DFG+ +
Sbjct: 132 IGLFFLQSKGIIYRDLKLDNVMLDSEG--HIKIADFGMCK 169
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 194 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 252 DFPEKFFPKARDLVEKLLVL 271
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 261
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 262 RDLVEKLLVL 271
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 174
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 175 DFGTAKVLS 183
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E A GGE+ L R ++E Y Q++ +Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +L++ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 192
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R ++E Y Q++ +Y+H L + + L P +L++ G ++
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG--YI 181
Query: 522 LLTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 KVTDFGFAKRV 192
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN 241
Y LG G G V A ++G+ A K++ K + + + E+ + L H +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+++L+D ++KD ++ E AG EL + ++ +E + + +Q++S ++Y HR I
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 302 AHLGLTPGDLLVAHPGGRHL--LLTDFGLSRRIT 333
H L P +LL+ HL + DFGLS +T
Sbjct: 129 VHRDLKPENLLL----DEHLNVKIADFGLSNIMT 158
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ ++Y H + H +++P+N+++ + VK+ D G + +T L +PN
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPN-- 171
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
+AAPEV++ + P+ DVWS GV+ YV+L PF +S P +N++
Sbjct: 172 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 220
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV++ + P+ DVWS GV+ YV+L PF +S P +N++ Y L K L
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT---LPKFL 230
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ A + + P R ++ E ++ W
Sbjct: 231 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 261
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL-- 521
G EL + ++ +E + + +Q++S ++Y HR I H L P +LL+ HL
Sbjct: 91 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL----DEHLNV 146
Query: 522 LLTDFGLSRRIT 533
+ DFGLS +T
Sbjct: 147 KIADFGLSNIMT 158
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN 241
Y LG G G V A ++G+ A K++ K + + + E+ + L H +
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+++L+D ++KD ++ E AG EL + ++ +E + + +Q++S ++Y HR I
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 302 AHLGLTPGDLLVAHPGGRHL--LLTDFGLSRRIT 333
H L P +LL+ HL + DFGLS +T
Sbjct: 135 VHRDLKPENLLL----DEHLNVKIADFGLSNIMT 164
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ ++Y H + H +++P+N+++ + VK+ D G + +T L +PN
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPN-- 177
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
+AAPEV++ + P+ DVWS GV+ YV+L PF +S P +N++
Sbjct: 178 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 226
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV++ + P+ DVWS GV+ YV+L PF +S P +N++ Y L K L
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT---LPKFL 236
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ A + + P R ++ E ++ W
Sbjct: 237 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 267
Score = 38.5 bits (88), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL-- 521
G EL + ++ +E + + +Q++S ++Y HR I H L P +LL+ HL
Sbjct: 97 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL----DEHLNV 152
Query: 522 LLTDFGLSRRIT 533
+ DFGLS +T
Sbjct: 153 KIADFGLSNIMT 164
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 93
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 154 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 184
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G T +V + N
Sbjct: 137 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFG-TAKVLSPESKQARAN 193
Query: 1010 T--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
+ ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 253
Query: 1068 F-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 254 FPEKFFPKARDLVEKLLVL 272
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 262
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 263 RDLVEKLLVL 272
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 118 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 175
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 176 DFGTAKVLS 184
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 93
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 154 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 184
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 137 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 194
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 195 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 252
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 253 DFPEKFFPKARDLVEKLLVL 272
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 262
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 263 RDLVEKLLVL 272
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 118 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 175
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 176 DFGTAKVLS 184
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN 241
Y LG G G V A ++G+ A K++ K + + + E+ + L H +
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+++L+D ++KD ++ E AG EL + ++ +E + + +Q++S ++Y HR I
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 302 AHLGLTPGDLLVAHPGGRHL--LLTDFGLSRRIT 333
H L P +LL+ HL + DFGLS +T
Sbjct: 134 VHRDLKPENLLL----DEHLNVKIADFGLSNIMT 163
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ ++Y H + H +++P+N+++ + VK+ D G + +T L +PN
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPN-- 176
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
+AAPEV++ + P+ DVWS GV+ YV+L PF +S P +N++
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 225
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV++ + P+ DVWS GV+ YV+L PF +S P +N++ Y L K L
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT---LPKFL 235
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ A + + P R ++ E ++ W
Sbjct: 236 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL-- 521
G EL + ++ +E + + +Q++S ++Y HR I H L P +LL+ HL
Sbjct: 96 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL----DEHLNV 151
Query: 522 LLTDFGLSRRIT 533
+ DFGLS +T
Sbjct: 152 KIADFGLSNIMT 163
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 90
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 151 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 181
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G T +V + N
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFG-TAKVLSPESKQARAN 190
Query: 1010 --TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
Query: 1068 F-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 251 FPEKFFPKARDLVEKLLVL 269
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 259
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 260 RDLVEKLLVL 269
Score = 37.7 bits (86), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 115 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 172
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 173 DFGTAKVLS 181
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
Length = 295
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 7/171 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+ +L+GL+YLH + H +I+ DNV++ + V +K+ D G ++R+ +
Sbjct: 125 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGV-LKISDFGTSKRLAGINPCTETF 183
Query: 1009 NTPNPEFAAPEVLAEEP--IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ-NVNFVR 1065
T ++ APE++ + P D+WS G + +G PF EP+ V +
Sbjct: 184 -TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242
Query: 1066 YRFEYLFKELTQEATRFLMLIFKHEVDWITLANN-IDHEFWHVKDLKRETN 1115
E + + ++ EA F++ F+ + D AN+ + EF V K++T
Sbjct: 243 VHPE-IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQ 292
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
LG+G GIVY + S+ A K + + ++Y E+ + L H+N+V+ S+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 251 TKDSFTIISELAGGGELLHSLTRQSYY----TEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
I E GG L +L R + E I Y +Q+L GL Y+H I H +
Sbjct: 90 ENGFIKIFMEQVPGGS-LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
++L+ G L ++DFG S+R+ +NP
Sbjct: 149 KGDNVLINTYSGV-LKISDFGTSKRLAG---INP 178
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 463 PGGELLHSLTRQSYY----TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
PGG L +L R + E I Y +Q+L GL Y+H I H + ++L+ G
Sbjct: 102 PGGSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSG 160
Query: 519 RHLLLTDFGLSRRITSFGKLNPLEYGNGQY 548
L ++DFG S+R+ G QY
Sbjct: 161 V-LKISDFGTSKRLAGINPCTETFTGTLQY 189
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 1144 APEVLAEEP--IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ-NVNFVRYRFEYLFK 1200
APE++ + P D+WS G + +G PF EP+ V + E + +
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE-IPE 249
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ EA F++ F+ P KR + + +L
Sbjct: 250 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 90
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 151 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 181
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 192 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 250 DFPEKFFPKARDLVEKLLVL 269
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 259
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 260 RDLVEKLLVL 269
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 115 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 172
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 173 DFGTAKVLS 181
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 90
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 151 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 181
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 192 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 250 DFPEKFFPKARDLVEKLLVL 269
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 259
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 260 RDLVEKLLVL 269
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 115 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 172
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 173 DFGTAKVLS 181
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + E D+M++L H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV-TRERDVMSRLDHP 74
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 135 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 165
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 118 FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 175
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 176 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 233
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 234 DFPEKFFPKARDLVEKLLVL 253
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 243
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 244 RDLVEKLLVL 253
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 99 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 156
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 157 DFGTAKVLS 165
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 194 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 252 DFPEKFFPKARDLVEKLLVL 271
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 261
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 262 RDLVEKLLVL 271
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 174
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 175 DFGTAKVLS 183
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 194 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 252 DFPEKFFPKARDLVEKLLVL 271
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 261
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 262 RDLVEKLLVL 271
Score = 37.7 bits (86), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 174
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 175 DFGTAKVLS 183
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFA 1016
GL +L +G+ + +++ DNV++ S +K+ D G C + + T TP+ +
Sbjct: 454 GLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPD--YI 509
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
APE++A +P D W+ GVL Y +L+G +PF G+ E E Q++
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE++A +P D W+ GVL Y +L+G +PF G+ E E Q++ + + Y K ++
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI--MEHNVAYP-KSMS 566
Query: 1204 QEATRFLMLIFKRAPGKR 1221
+EA + + PGKR
Sbjct: 567 KEAVAICKGLMTKHPGKR 584
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
+TD ++F LG+G G V + + + YA K++ K + + D+ + +
Sbjct: 340 LTD-FNFLMVLGKGSFGKVMLSERKGTDELYAVKILK------KDVVIQDDDVECTMVEK 392
Query: 241 N----------LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
L +LH ++T D + E GG+L++ + + + E Y ++
Sbjct: 393 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA 452
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
GL ++ I + L ++++ G H+ + DFG+ +
Sbjct: 453 IGLFFLQSKGIIYRDLKLDNVMLDSEG--HIKIADFGMCK 490
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ K K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P +LL+ +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ G+ YLH G+ H +I+P+N+++ ++++ L R L++ + P
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + DVWS G++ +L+G P+ S+
Sbjct: 173 -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L +
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKI 146
Query: 524 TDFGLS 529
+DFGL+
Sbjct: 147 SDFGLA 152
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FK 1200
APE+L + DVWS G++ +L+G P+ S ++ Q + + + YL +K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS--DSCQEYSDWKEKKTYLNPWK 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFK--NELDIMNQLCH 239
D ++ LG G G V +G +YA K++ K + K + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
LV+L S++ + ++ E A GGE+ L R ++E Y Q++ +Y+H L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ + L P +L++ G ++ +TDFGL++R+
Sbjct: 161 DLIYRDLKPENLMIDQQG--YIQVTDFGLAKRV 191
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMIDQQGYIQV--TDFGLAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R ++E Y Q++ +Y+H L + + L P +L++ G ++
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG--YI 180
Query: 522 LLTDFGLSRRI 532
+TDFGL++R+
Sbjct: 181 QVTDFGLAKRV 191
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 1122 AKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1179
AK V G W G P L APE++ + D W+ GVL Y + +G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 1180 SEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHENRWLVPSE 1237
+ + + + RF F ++ R L+ + KR + V + ++W ++
Sbjct: 242 QPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
Query: 1238 YM 1239
++
Sbjct: 302 WI 303
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 97
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ ++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 158 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 188
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G T +V + N
Sbjct: 141 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFG-TAKVLSPESKQARAN 197
Query: 1010 --TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 257
Query: 1068 F-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 258 FPEKFFPKARDLVEKLLVL 276
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 266
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 267 RDLVEKLLVL 276
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 122 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 179
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 180 DFGTAKVLS 188
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E + + Y
Sbjct: 194 FVGTA--QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 252 DFPEKFFPKARDLVEKLLVL 271
Score = 37.7 bits (86), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 174
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 175 DFGTAKVLS 183
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E + + Y F E F +
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKA 261
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 262 RDLVEKLLVL 271
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFK--NELDIMNQLCH 239
D ++ LG G G V +G +YA K++ K + K + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
LV+L S++ + ++ E A GGE+ L R ++E Y Q++ +Y+H L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ + L P +L++ G ++ +TDFGL++R+
Sbjct: 161 DLIYRDLKPENLMIDQQG--YIKVTDFGLAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGLAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R ++E Y Q++ +Y+H L + + L P +L++ G ++
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG--YI 180
Query: 522 LLTDFGLSRRI 532
+TDFGL++R+
Sbjct: 181 KVTDFGLAKRV 191
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 1122 AKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1179
AK V G W G P L APE++ + D W+ GVL Y + +G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 1180 SEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHENRWLVPSE 1237
+ + + + RF F ++ R L+ + KR + V + ++W ++
Sbjct: 242 QPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
Query: 1238 YM 1239
++
Sbjct: 302 WI 303
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + E D+M++L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV-TRERDVMSRLDHP 89
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 150 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 180
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 133 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 190
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 191 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 248
Query: 1067 RF 1068
F
Sbjct: 249 DF 250
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1195
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Score = 37.4 bits (85), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 114 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 171
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 172 DFGTAKVLS 180
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 136 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E + + Y
Sbjct: 194 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 252 DFPEKFFPKARDLVEKLLVL 271
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 174
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 175 DFGTAKVLS 183
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E + + Y F E F +
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKA 261
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 262 RDLVEKLLVL 271
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 95
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 156 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 186
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 139 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 196
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 197 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 254
Query: 1067 RFEYLF 1072
F F
Sbjct: 255 DFPAAF 260
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF 1199
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F F
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAF 260
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 120 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 177
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 178 DFGTAKVLS 186
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + E D+M++L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV-TRERDVMSRLDHP 89
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 150 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 180
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G T +V + N
Sbjct: 133 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFG-TAKVLSPESKQARAN 189
Query: 1010 T--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
+ ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 249
Query: 1068 F 1068
F
Sbjct: 250 F 250
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1195
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Score = 37.4 bits (85), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 114 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 171
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 172 DFGTAKVLS 180
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 191 LGRGVTGIVYHA---VERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHRNLV 243
LG+G G V+ ++G+ +A KV M + + + K E +I+ ++ H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
L +++T +I E GGEL L R+ + E Y+ ++ L ++H+ I +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIY 144
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P ++++ H G H+ LTDFGL +
Sbjct: 145 RDLKPENIMLNHQG--HVKLTDFGLCK 169
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 947 KDAYC--VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL 1004
+D C + + L +LH +G+ + +++P+N+++ VKL D G + GT+
Sbjct: 120 EDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN--HQGHVKLTDFGLCKESIHDGTV 177
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV 1064
H E+ APE+L D WS G L Y +L+GA PF G++ +T +
Sbjct: 178 THTF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 1065 RYRFEYLFKELTQEATRFLMLIFK 1088
+ L LTQEA L + K
Sbjct: 237 KLN---LPPYLTQEARDLLKKLLK 257
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L R+ + E Y+ ++ L ++H+ I + L P ++++ H G H+ L
Sbjct: 105 GGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG--HVKL 162
Query: 524 TDFGLSR 530
TDFGL +
Sbjct: 163 TDFGLCK 169
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+L D WS G L Y +L+GA PF G++ +T + + L LT
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN---LPPYLT 245
Query: 1204 QEATRFLMLIFKRAPGKR 1221
QEA L + KR R
Sbjct: 246 QEARDLLKKLLKRNAASR 263
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
++ ++Y H + H +++P+N+++ ++ VK+ D G + +T L +PN
Sbjct: 116 QIICAIEYCHRHKIVHRDLKPENLLLDD--NLNVKIADFGLSNIMTDGNFLKTSCGSPN- 172
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+AAPEV+ + P+ DVWS G++ YV+L G PF + P + VN Y
Sbjct: 173 -YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVY 225
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG---KGNQYKSLFKNELDIMNQLCHRN 241
Y + LG G G V A + + A K ++ K + + E+ + L H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+++L+D T ++ E AGG EL + + TE + + +Q++ ++Y HR I
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGG-ELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
H L P +LL+ ++ + DFGLS +T
Sbjct: 130 VHRDLKPENLLL--DDNLNVKIADFGLSNIMT 159
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 1144 APEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV+ + P+ DVWS G++ YV+L G PF + P + VN Y
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPG 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
Q R +++ P +R T++E + W
Sbjct: 235 AQSLIRRMIV---ADPMQRITIQEIRRDPWF 262
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + + TE + + +Q++ ++Y HR I H L P +LL+ ++ +
Sbjct: 92 GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL--DDNLNVKI 149
Query: 524 TDFGLSRRIT 533
DFGLS +T
Sbjct: 150 ADFGLSNIMT 159
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 191 LGRGVTGIVYHA---VERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHRNLV 243
LG+G G V+ ++G+ +A KV M + + + K E +I+ ++ H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
L +++T +I E GGEL L R+ + E Y+ ++ L ++H+ I +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIY 144
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P ++++ H G H+ LTDFGL +
Sbjct: 145 RDLKPENIMLNHQG--HVKLTDFGLCK 169
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 947 KDAYC--VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL 1004
+D C + + L +LH +G+ + +++P+N+++ VKL D G + GT+
Sbjct: 120 EDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN--HQGHVKLTDFGLCKESIHDGTV 177
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV 1064
H E+ APE+L D WS G L Y +L+GA PF G++ +T +
Sbjct: 178 THXF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 1065 RYRFEYLFKELTQEATRFLMLIFK 1088
+ L LTQEA L + K
Sbjct: 237 KLN---LPPYLTQEARDLLKKLLK 257
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L R+ + E Y+ ++ L ++H+ I + L P ++++ H G H+ L
Sbjct: 105 GGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG--HVKL 162
Query: 524 TDFGLSR 530
TDFGL +
Sbjct: 163 TDFGLCK 169
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+L D WS G L Y +L+GA PF G++ +T + + L LT
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN---LPPYLT 245
Query: 1204 QEATRFLMLIFKRAPGKR 1221
QEA L + KR R
Sbjct: 246 QEARDLLKKLLKRNAASR 263
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G +YA K++ K Q + NE I+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 92
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 153 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 184
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 135 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 189
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 190 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 247
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 248 VRFPSHFSSDLKDLLRNLLQV 268
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 117 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 174
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 175 VTDFGFAKRV 184
Score = 36.6 bits (83), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 176 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 227 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 286
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 287 HKWFATTDWI 296
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 182
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 183 VTDFGFAKRV 192
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 182
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 183 VTDFGFAKRV 192
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
LG+G GIVY + S+ A K + + ++Y E+ + L H+N+V+ S+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 251 TKDSFTIISELAGGGELLHSLTRQSYY----TEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
I E GG L +L R + E I Y +Q+L GL Y+H I H +
Sbjct: 76 ENGFIKIFMEQVPGGS-LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
++L+ G L ++DFG S+R+ +NP
Sbjct: 135 KGDNVLINTYSGV-LKISDFGTSKRLAG---INP 164
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+ +L+GL+YLH + H +I+ DNV++ + V +K+ D G ++R+ +
Sbjct: 111 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGV-LKISDFGTSKRLAGINPCTETF 169
Query: 1009 NTPNPEFAAPEVLAEEP--IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ-NVNFVR 1065
T ++ APE++ + P D+WS G + +G PF EP+ V +
Sbjct: 170 -TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 228
Query: 1066 YRFEYLFKELTQEATRFLMLIFKHEVDWITLANNI 1100
E + + ++ EA F++ F+ + D AN++
Sbjct: 229 VHPE-IPESMSAEAKAFILKCFEPDPDKRACANDL 262
Score = 38.5 bits (88), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 463 PGGELLHSLTRQSYY----TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
PGG L +L R + E I Y +Q+L GL Y+H I H + ++L+ G
Sbjct: 88 PGGSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSG 146
Query: 519 RHLLLTDFGLSRRITSFGKLNPLEYGNGQY 548
L ++DFG S+R+ G QY
Sbjct: 147 V-LKISDFGTSKRLAGINPCTETFTGTLQY 175
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 1144 APEVLAEEP--IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ-NVNFVRYRFEYLFK 1200
APE++ + P D+WS G + +G PF EP+ V + E + +
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE-IPE 235
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ EA F++ F+ P KR + + +L
Sbjct: 236 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 182
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 183 VTDFGFAKRV 192
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG G G V +G +YA K++ K Q + NE I+ + LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNFPFLVKLE 107
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
S++ + ++ E GGE+ L R ++E Y Q++ +Y+H L + + L
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
P +LL+ G ++ +TDFG ++R+
Sbjct: 168 KPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQV 182
Query: 524 TDFGLSRRI 532
TDFG ++R+
Sbjct: 183 TDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ V L+YLH + + + +++P+N+++ ++ +K+ D G + V + +
Sbjct: 110 FYAAEVCLALEYLHSKDIIYRDLKPENILLD--KNGHIKITDFGFAKYVPDVTYXL---- 163
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
P++ APEV++ +P D WS G+L Y +L+G +PF + +T + + RF
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP 223
Query: 1070 YLFKE 1074
F E
Sbjct: 224 PFFNE 228
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG G G V+ R +GR YA KV+ + Q + +E +++ + H ++R+
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLMLSIVTHPFIIRMW 72
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
+++ +I + GGEL L + + Y ++ L+Y+H I + L
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDL 132
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
P ++L+ G H+ +TDFG ++ +
Sbjct: 133 KPENILLDKNG--HIKITDFGFAKYV 156
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1201
APEV++ +P D WS G+L Y +L+G +PF + +T + + RF F E
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNE 228
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L + + Y ++ L+Y+H I + L P ++L+ G H+ +
Sbjct: 90 GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG--HIKI 147
Query: 524 TDFGLSRRI 532
TDFG ++ +
Sbjct: 148 TDFGFAKYV 156
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E A GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +L++ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLMIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R ++E Y Q++ +Y+H L + + L P +L++ G ++
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG--YI 180
Query: 522 LLTDFGLSRRI 532
+TDFG ++R+
Sbjct: 181 QVTDFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
+D Y+ ++G G G+ ++ S A K + +G + K E+ L H N
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+VR + T I+ E A GGEL + ++E + + +QL+SG+ Y H + +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
H L + L+ L + FG S+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK 165
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINT-P 1011
++ G+ Y H +CH +++ +N ++ + ++K+ G ++ +++H P +T
Sbjct: 124 LISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKSTVG 178
Query: 1012 NPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPE 1056
P + APEVL ++ + DVWS GV YV+L GA PF EP+
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK 224
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
G+S+ + + K+ P +A E + + DVWS GV YV+L GA PF
Sbjct: 162 GYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
Query: 1181 EPETRQNVNFVRYRFEYLFKE---LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---V 1234
EP+ + +Y + ++ E + IF P KR ++ E + W +
Sbjct: 222 EPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
Query: 1235 PSEYM 1239
P++ M
Sbjct: 282 PADLM 286
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFD 645
P++ +D+Y+ + +I G F V +K + E LVA K E V E
Sbjct: 9 PMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNE-LVAVKYIERGEKIDENVKREII 67
Query: 646 NLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
N RSLRH I E T +++A+ VME G ++ + + ++E Q
Sbjct: 68 NHRSLRHPNIVRFKEVI---LTPTHLAI-VMEYASGGELFERICNAGRFSEDEARFFFQQ 123
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + ++E + + +QL+SG+ Y H + + H L + L+ L +
Sbjct: 99 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 158
Query: 524 TDFGLSR 530
FG S+
Sbjct: 159 CAFGYSK 165
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
+D Y+ ++G G G+ ++ S A K + +G + K E+ L H N
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+VR + T I+ E A GGEL + ++E + + +QL+SG+ Y H + +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
H L + L+ L + FG S+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK 165
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINT-P 1011
++ G+ Y H +CH +++ +N ++ + ++K+ G ++ +++H P +T
Sbjct: 124 LISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKDTVG 178
Query: 1012 NPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPE 1056
P + APEVL ++ + DVWS GV YV+L GA PF EP+
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK 224
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 1144 APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE- 1201
APEVL ++ + DVWS GV YV+L GA PF EP+ + +Y +
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY 243
Query: 1202 --LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---VPSEYM 1239
++ E + IF P KR ++ E + W +P++ M
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLM 286
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFD 645
P++ +D+Y+ + +I G F V +K + E LVA K E V E
Sbjct: 9 PMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNE-LVAVKYIERGEKIDENVKREII 67
Query: 646 NLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
N RSLRH I E T +++A+ VME G ++ + + ++E Q
Sbjct: 68 NHRSLRHPNIVRFKEVI---LTPTHLAI-VMEYASGGELFERICNAGRFSEDEARFFFQQ 123
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + ++E + + +QL+SG+ Y H + + H L + L+ L +
Sbjct: 99 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 158
Query: 524 TDFGLSR 530
FG S+
Sbjct: 159 CAFGYSK 165
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G +YA K++ K Q + NE I+ +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 120
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 181 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 212
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 163 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 217
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 218 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 275
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 276 VRFPSHFSSDLKDLLRNLLQV 296
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 145 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 202
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 203 VTDFGFAKRV 212
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 204 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 255 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 314
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 315 HKWFATTDWI 324
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLF----KNELDIMNQLCHR 240
+ G+ LG+G VY A +G A K M K YK+ +NE+ I QL H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIK-MIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
+++ L++ +E + ++ E+ GE+ L R ++E + H++ Q+++G+ Y+H
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
I H LT +LL+ ++ + DFGL+ ++
Sbjct: 132 GILHRDLTLSNLLLTR--NMNIKIADFGLATQL 162
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ G+ YLH G+ H ++ N+++ R++ +K+ D G ++ K+ H P
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLT--RNMNIKIADFGLATQL-KMPHEKHYTLCGTPN 177
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1074
+ +PE+ ++DVWS G + Y LL G PF + T V Y
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF--- 234
Query: 1075 LTQEATRFL-MLIFKHEVDWITLANNIDHEFW 1105
L+ EA + L+ ++ D ++L++ +DH F
Sbjct: 235 LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
Score = 37.4 bits (85), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
+PE+ ++DVWS G + Y LL G PF + T V Y L+
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF---LS 236
Query: 1204 QEATRFLMLIFKRAPGKRPTV 1224
EA + + +R P R ++
Sbjct: 237 IEAKDLIHQLLRRNPADRLSL 257
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
++E + H++ Q+++G+ Y+H I H LT +LL+ ++ + DFGL+ ++
Sbjct: 109 FSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR--NMNIKIADFGLATQL 162
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E A GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +L++ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 191
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R ++E Y Q++ +Y+H L + + L P +L++ G ++
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG--YI 180
Query: 522 LLTDFGLSRRI 532
+TDFG ++R+
Sbjct: 181 KVTDFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G +YA K++ K Q + NE I+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 92
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 153 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 184
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 135 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 189
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 190 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 247
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 248 VRFPSHFSSDLKDLLRNLLQV 268
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 117 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 174
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 175 VTDFGFAKRV 184
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 176 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 227 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 286
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 287 HKWFATTDWI 296
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHR 240
D Y+ + +G G T +V A A K + + Q L K E+ M+Q H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 73
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLT--------RQSYYTEYDIAHYIRQLLSG 292
N+V + S+ KD ++ +L GG +L + + E IA +R++L G
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
L+Y+H+ H + G++L+ G + + DFG+S + + G +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGS--VQIADFGVSAFLATGGDIT 178
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---- 1004
A + VL+GL+YLH G H +++ N+++ SVQ+ D G + + G +
Sbjct: 124 ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA--DFGVSAFLATGGDITRNK 181
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFP-QTDVWSAGVLAYVLLSGASPF 1049
+ P + APEV+ + + + D+WS G+ A L +GA+P+
Sbjct: 182 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 538
E IA +R++L GL+Y+H+ H + G++L+ G + + DFG+S + + G +
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS--VQIADFGVSAFLATGGDI 177
Query: 539 N 539
Sbjct: 178 T 178
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 1144 APEVLAEEPIFP-QTDVWSAGVLAYVLLSGASPFRG-----------QSEPETRQNVNFV 1191
APEV+ + + + D+WS G+ A L +GA+P+ Q++P + +
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET---- 249
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + + K+ + + + L ++ P KRPT E +++
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 90
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A GELL + + + E Y +++S L+Y+H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 151 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 181
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
+ ++ L+YLH +G+ H +++P+N+++ + +++ D G + ++ K
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ T ++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y
Sbjct: 192 FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
Query: 1067 RF-EYLFKELTQEATRFLML 1085
F E F + + L+L
Sbjct: 250 DFPEKFFPKARDLVEKLLVL 269
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 259
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 260 RDLVEKLLVL 269
Score = 37.7 bits (86), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 115 GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 172
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 173 DFGTAKVLS 181
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHR 240
D Y+ + +G G T +V A A K + + Q L K E+ M+Q H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 68
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLT--------RQSYYTEYDIAHYIRQLLSG 292
N+V + S+ KD ++ +L GG +L + + E IA +R++L G
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
L+Y+H+ H + G++L+ G + DFG+S + + G +
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQ--IADFGVSAFLATGGDIT 173
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---- 1004
A + VL+GL+YLH G H +++ N+++ SVQ+ D G + + G +
Sbjct: 119 ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA--DFGVSAFLATGGDITRNK 176
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFP-QTDVWSAGVLAYVLLSGASPF 1049
+ P + APEV+ + + + D+WS G+ A L +GA+P+
Sbjct: 177 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 538
E IA +R++L GL+Y+H+ H + G++L+ G + DFG+S + + G +
Sbjct: 115 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ--IADFGVSAFLATGGDI 172
Query: 539 N 539
Sbjct: 173 T 173
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 1144 APEVLAEEPIFP-QTDVWSAGVLAYVLLSGASPFRG-----------QSEPETRQNVNFV 1191
APEV+ + + + D+WS G+ A L +GA+P+ Q++P + +
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET---- 244
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + + K+ + + + L ++ P KRPT E +++
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 286
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G ++A K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 VTDFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 85
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 146 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 177
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TK 1000
H Y VL +YLH L + +++P+N+++ +QV D G +RV T
Sbjct: 128 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVKGRTWTL 184
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GT PE+ APE++ + D W+ GVL Y + +G PF + +
Sbjct: 185 CGT---------PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 235
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLI 1086
+ + RF F ++ R L+ +
Sbjct: 236 IVSGKVRFPSHFSSDLKDLLRNLLQV 261
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 110 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 167
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 168 VTDFGFAKRV 177
Score = 37.4 bits (85), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W+ G P L APE++ + D W+ GVL Y + +
Sbjct: 169 TDFGF---AKRVKGRTWTLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 219
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 220 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 279
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 280 HKWFATTDWI 289
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G ++A K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 VTDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY---KSLFKNELDIMNQLCHRNLVRLHD 247
LG+G G V R++G+ YA K + K + +++ NE I+ ++ R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 248 SYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
+YETKD+ ++ L GG+L + Q+ + E Y ++ GL+ +HR I +
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
L P ++L+ G H+ ++D GL+
Sbjct: 312 LKPENILLDDHG--HIRISDLGLA 333
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
+ GL+ LH + + +++P+N+++ +++ DLG V + T+ + T
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
+ APEV+ E D W+ G L Y +++G SPF+ + + R+ V E L
Sbjct: 350 G--YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------ERL 400
Query: 1072 FKELTQE-ATRF 1082
KE+ +E + RF
Sbjct: 401 VKEVPEEYSERF 412
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEV+ E D W+ G L Y +++G SPF+ + + R+ V E L KE+
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------ERLVKEVP 405
Query: 1204 QE-ATRF 1209
+E + RF
Sbjct: 406 EEYSERF 412
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 474 QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
Q+ + E Y ++ GL+ +HR I + L P ++L+ G H+ ++D GL+
Sbjct: 280 QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGLA 333
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E A GGE+ L R + E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +L++ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 191
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R + E Y Q++ +Y+H L + + L P +L++ G ++
Sbjct: 123 APGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG--YI 180
Query: 522 LLTDFGLSRRI 532
+TDFG ++R+
Sbjct: 181 KVTDFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 182
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 183 VTDFGFAKRV 192
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 VTDFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TK 1000
H Y VL +YLH L + +++P+N+++ +QV D G +RV T
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVKGRTWTL 199
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GT PE+ APE++ + D W+ GVL Y + +G PF + +
Sbjct: 200 CGT---------PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLI 1086
+ + RF F ++ R L+ +
Sbjct: 251 IVSGKVRFPSHFSSDLKDLLRNLLQV 276
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 182
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 183 VTDFGFAKRV 192
Score = 37.0 bits (84), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W+ G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWTLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 VTDFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 VTDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY---KSLFKNELDIMNQLCHRNLVRLHD 247
LG+G G V R++G+ YA K + K + +++ NE I+ ++ R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 248 SYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
+YETKD+ ++ L GG+L + Q+ + E Y ++ GL+ +HR I +
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
L P ++L+ G H+ ++D GL+
Sbjct: 312 LKPENILLDDHG--HIRISDLGLA 333
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
+ GL+ LH + + +++P+N+++ +++ DLG V + T+ + T
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
+ APEV+ E D W+ G L Y +++G SPF+ + + R+ V E L
Sbjct: 350 G--YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------ERL 400
Query: 1072 FKELTQE-ATRF 1082
KE+ +E + RF
Sbjct: 401 VKEVPEEYSERF 412
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEV+ E D W+ G L Y +++G SPF+ + + R+ V E L KE+
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------ERLVKEVP 405
Query: 1204 QE-ATRF 1209
+E + RF
Sbjct: 406 EEYSERF 412
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 474 QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
Q+ + E Y ++ GL+ +HR I + L P ++L+ G H+ ++D GL+
Sbjct: 280 QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGLA 333
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V + +G ++A K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 VTDFGFAKRV 191
Score = 36.6 bits (83), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
+D + LH+ H +I+PDN++M + ++L D G ++ + GT+ + P++
Sbjct: 188 IDSVHQLHY---VHRDIKPDNILMD--MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 242
Query: 1016 AAPEVL-----AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
+PE+L + P+ D WS GV Y +L G +PF +S ET + + RF++
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-------FKNELDIMNQLCHRNLV 243
+GRG G V +++ + +A K++ N+++ L F+ E D++ + +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKIL----NKWEMLKRAETACFREERDVLVNGDSKWIT 137
Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIA 302
LH +++ ++ ++ + GG+LL L++ ++A Y+ +++ +D +H+L
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYV 197
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
H + P ++L+ G H+ L DFG ++ G +
Sbjct: 198 HRDIKPDNILMDMNG--HIRLADFGSCLKLMEDGTV 231
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1197
P+ D WS GV Y +L G +PF +S ET + + RF++
Sbjct: 260 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG G G V + +G +YA K++ K Q + NE I + LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIQQAVNFPFLVKLE 108
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
S++ + ++ E A GGE+ L R ++E Y Q++ +Y+H L + + L
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
P +LL+ G ++ + DFG ++R+
Sbjct: 169 KPENLLIDQQG--YIKVADFGFAKRV 192
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YI 181
Query: 522 LLTDFGLSRRI 532
+ DFG ++R+
Sbjct: 182 KVADFGFAKRV 192
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 1122 AKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1179
AK V G W G P L APE++ + D W+ GVL Y + +G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
Query: 1180 SEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHENRWLVPSE 1237
+ + + + RF F ++ R L+ + KR + V + ++W ++
Sbjct: 243 QPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 302
Query: 1238 YM 1239
++
Sbjct: 303 WI 304
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
++LG G VY + +++G A K V S E+ +M +L H N+VRL+D
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYT----EYDIAHYIR-QLLSGLDYMHRLSIA 302
T++ T++ E + +R T E ++ Y + QLL GL + H I
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
H L P +LL+ G L L DFGL+R +FG
Sbjct: 131 HRDLKPQNLLINKRG--QLKLGDFGLAR---AFG 159
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 479 EYDIAHYIR-QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
E ++ Y + QLL GL + H I H L P +LL+ G L L DFGL+R +FG
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG--QLKLGDFGLAR---AFG 159
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 191 LGRGVTGIVYHAVERS---SGRNYAAKVMT-------GKGNQYKSLFKNELDIMNQLCHR 240
LG G G V+ + S +G+ YA KV+ K ++ + L+ + Q
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ--SP 119
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
LV LH +++T+ +I + GGEL L+++ +TE+++ Y+ +++ L+++H+L
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
I + + ++L+ G H++LTDFGLS+ +
Sbjct: 180 IIYRDIKLENILLDSNG--HVVLTDFGLSKEFVA 211
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL L+++ +TE+++ Y+ +++ L+++H+L I + + ++L+ G H++L
Sbjct: 143 GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVL 200
Query: 524 TDFGLSRRITS 534
TDFGLS+ +
Sbjct: 201 TDFGLSKEFVA 211
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T H+ V ++ L++LH G+ + +I+ +N+++ S + V L D G ++ T
Sbjct: 157 TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFVADET 214
Query: 1004 LIHPINTPNPEFAAPEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
E+ AP+++ + D WS GVL Y LL+GASPF E ++ +
Sbjct: 215 ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 274
Query: 1062 N 1062
+
Sbjct: 275 S 275
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 1157 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KELTQEATRFLMLIFK 1215
D WS GVL Y LL+GASPF E ++ ++ + E + +E++ A + +
Sbjct: 243 VDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLM 302
Query: 1216 RAPGKR 1221
+ P KR
Sbjct: 303 KDPKKR 308
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 VTDFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 VTDFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 183 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 294 HKWFATTDWI 303
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R + E Y Q++ +Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ +QV D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R + E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 125 PGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 182
Query: 523 LTDFGLSRRI 532
+TDFG ++R+
Sbjct: 183 VTDFGFAKRV 192
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
+ FG LG G V A E ++ R YA K++ K N+ + + E D+M++L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
V+L+ +++ + A G LL + + + E Y +++S L+Y+H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H L P ++L+ H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 936 CYLPIVIPTTHKDAYCV----TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID 991
C L + D C ++ L+YLH +G+ H +++P+N+++ + +++ D
Sbjct: 118 CLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITD 175
Query: 992 LGCTQRVTKLGTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
G T +V + N+ ++ +PE+L E+ +D+W+ G + Y L++G PF
Sbjct: 176 FG-TAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
Query: 1050 RGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLML 1085
R +E Q + + Y F E F + + L+L
Sbjct: 235 RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F E F +
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 261
Query: 1203 TQEATRFLML 1212
+ L+L
Sbjct: 262 RDLVEKLLVL 271
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G LL + + + E Y +++S L+Y+H I H L P ++L+ H+ +T
Sbjct: 117 GCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQIT 174
Query: 525 DFGLSRRIT 533
DFG ++ ++
Sbjct: 175 DFGTAKVLS 183
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
L +L S++ + ++ E A GGE+ L R ++E Y Q++ +Y+H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +L++ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 192
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R ++E Y Q++ +Y+H L + + L P +L++ G ++
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG--YI 181
Query: 522 LLTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 KVTDFGFAKRV 192
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
L +L S++ + ++ E A GGE+ L R ++E Y Q++ +Y+H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +L++ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 192
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R ++E Y Q++ +Y+H L + + L P +L++ G ++
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG--YI 181
Query: 522 LLTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 KVTDFGFAKRV 192
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SLFKNELDIMNQLC 238
D ++ +GRG V + +G+ YA K+M K + K S F+ E D++
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN-KWDMLKRGEVSCFREERDVLVNGD 119
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIA-HYIRQLLSGLDYMH 297
R + +LH +++ ++ ++ E GG+LL L++ ++A Y+ +++ +D +H
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
RL H + P ++L+ G H+ L DFG ++ + G + L
Sbjct: 180 RLGYVHRDIKPDNILLDRCG--HIRLADFGSCLKLRADGTVRSL 221
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
IP Y V+ + +H G H +I+PDN+++ R ++L D G ++
Sbjct: 159 IPAEMARFYLAEIVM-AIDSVHRLGYVHRDIKPDNILLD--RCGHIRLADFGSCLKLRAD 215
Query: 1002 GTLIHPINTPNPEFAAPEVL-------AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
GT+ + P++ +PE+L P+ D W+ GV AY + G +PF S
Sbjct: 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST 275
Query: 1055 PETRQNVNFVRYRFEYLFKELTQEAT 1080
ET + V Y+ E+L L E
Sbjct: 276 AETYGKI--VHYK-EHLSLPLVDEGV 298
Score = 33.1 bits (74), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEAT 1207
P+ D W+ GV AY + G +PF S ET + V Y+ E+L L E
Sbjct: 249 PECDWWALGVFAYEMFYGQTPFYADSTAETYGKI--VHYK-EHLSLPLVDEGV 298
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
+ +G+G G V+ ++ + + A K++ + + E+ +++Q + + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
SY II E GGG L L R + E+ IA ++++L GLDY+H H +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSAL-DLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
++L++ G + L DFG++ ++T
Sbjct: 148 AANVLLSEQG--DVKLADFGVAGQLT 171
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----KLGTL 1004
A + +L GL YLH H +I+ NV+++ VKL D G ++T K T
Sbjct: 123 ATMLKEILKGLDYLHSEKKIHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNTF 180
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
+ P + APEV+ + + D+WS G+ A L G P
Sbjct: 181 VG-----TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L R + E+ IA ++++L GLDY+H H + ++L++ G + L
Sbjct: 104 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVKL 161
Query: 524 TDFGLSRRIT 533
DFG++ ++T
Sbjct: 162 ADFGVAGQLT 171
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-------E 1196
APEV+ + + D+WS G+ A L G P +++ +R F
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPP---------NSDMHPMRVLFLIPKNNPP 238
Query: 1197 YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEF 1256
L + T+ F+ + P RPT +E +++++V + KK L +R K +
Sbjct: 239 TLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNS---KKTSYLTELIDRFKRW 295
Query: 1257 SDEYH 1261
E H
Sbjct: 296 KAEGH 300
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ LG G G V +G +YA K++ K Q + NE I+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
L +L S++ + ++ E A GGE+ L R + E Y Q++ +Y+H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +L++ G ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 192
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 143 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 198 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 256 VRFPSHFSSDLKDLLRNLLQV 276
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
PGGE+ L R + E Y Q++ +Y+H L + + L P +L++ G ++
Sbjct: 124 APGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG--YI 181
Query: 522 LLTDFGLSRRI 532
+TDFG ++R+
Sbjct: 182 KVTDFGFAKRV 192
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1114 TNYTFRLSAKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1171
T++ F AK V G W G P L APE++ + D W+ GVL Y + +
Sbjct: 184 TDFGF---AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHE 1229
G PF + + + + RF F ++ R L+ + KR + V +
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 294
Query: 1230 NRWLVPSEYM 1239
++W ++++
Sbjct: 295 HKWFATTDWI 304
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSLFKN-ELDIMNQLCHRNLVRL--- 245
+G G G+VY A SG A KV+ GK FKN EL IM +L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------FKNRELQIMRKLDHCNIVRLRYF 81
Query: 246 -HDSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHR 298
+ S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHS 140
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H + P +LL+ P L L DFG ++++
Sbjct: 141 FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 185
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSLFKN-ELDIMNQLCHRNLVRL--- 245
+G G G+VY A SG A KV+ GK FKN EL IM +L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------FKNRELQIMRKLDHCNIVRLRYF 81
Query: 246 -HDSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHR 298
+ S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHS 140
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H + P +LL+ P L L DFG ++++
Sbjct: 141 FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 185
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 33.9 bits (76), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
+D + LH+ H +I+PDNV++ + ++L D G ++ GT+ + P++
Sbjct: 204 IDSIHQLHY---VHRDIKPDNVLLDV--NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 258
Query: 1016 AAPEVL-AEEPIF----PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
+PE+L A E P+ D WS GV Y +L G +PF +S ET + RF++
Sbjct: 259 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 318
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-------FKNELDIMNQLCHRNLV 243
+GRG G V +++ R YA K++ N+++ L F+ E D++ + +
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKIL----NKWEMLKRAETACFREERDVLVNGDCQWIT 153
Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIA 302
LH +++ ++ ++ + GG+LL L++ D+A YI +++ +D +H+L
Sbjct: 154 ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV 213
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
H + P ++L+ G H+ L DFG ++ G +
Sbjct: 214 HRDIKPDNVLLDVNG--HIRLADFGSCLKMNDDGTVQ 248
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1197
P+ D WS GV Y +L G +PF +S ET + RF++
Sbjct: 276 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 318
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
+D + LH+ H +I+PDNV++ + ++L D G ++ GT+ + P++
Sbjct: 188 IDSIHQLHY---VHRDIKPDNVLLDV--NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 242
Query: 1016 AAPEVL-AEEPIF----PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
+PE+L A E P+ D WS GV Y +L G +PF +S ET + RF++
Sbjct: 243 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 302
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-------FKNELDIMNQLCHRNLV 243
+GRG G V +++ R YA K++ N+++ L F+ E D++ + +
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKIL----NKWEMLKRAETACFREERDVLVNGDCQWIT 137
Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIA 302
LH +++ ++ ++ + GG+LL L++ D+A YI +++ +D +H+L
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYV 197
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
H + P ++L+ G H+ L DFG ++ G +
Sbjct: 198 HRDIKPDNVLLDVNG--HIRLADFGSCLKMNDDGTVQ 232
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1197
P+ D WS GV Y +L G +PF +S ET + RF++
Sbjct: 260 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 302
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 30/161 (18%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + + G +A K + + S E+ I+ +L H N+V+L+
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 247 DSYETKDSFTIISE-----------LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
D TK ++ E + GG L S+T +S ++ QLL+G+ Y
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS---------FLLQLLNGIAY 115
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
H + H L P +LL+ G L + DFGL+R +FG
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR---AFG 151
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-TKLGTLIHPINT 1010
+ +L+G+ Y H R + H +++P N+++ R ++K+ D G + + H + T
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVT 163
Query: 1011 PNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPE 1056
+ AP+VL + T D+WS G + +++G F G SE +
Sbjct: 164 --LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
++ QLL+G+ Y H + H L P +LL+ G L + DFGL+R +FG
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR---AFG 151
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 30/161 (18%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + + G +A K + + S E+ I+ +L H N+V+L+
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 247 DSYETKDSFTIISE-----------LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
D TK ++ E + GG L S+T +S ++ QLL+G+ Y
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS---------FLLQLLNGIAY 115
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
H + H L P +LL+ G L + DFGL+R +FG
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR---AFG 151
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-TKLGTLIHPINT 1010
+ +L+G+ Y H R + H +++P N+++ R ++K+ D G + + H I T
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEIVT 163
Query: 1011 PNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPE 1056
+ AP+VL + T D+WS G + +++G F G SE +
Sbjct: 164 --LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
++ QLL+G+ Y H + H L P +LL+ G L + DFGL+R +FG
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR---AFG 151
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 30/161 (18%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + + G +A K + + S E+ I+ +L H N+V+L+
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 247 DSYETKDSFTIISE-----------LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
D TK ++ E + GG L S+T +S ++ QLL+G+ Y
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS---------FLLQLLNGIAY 115
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
H + H L P +LL+ G L + DFGL+R +FG
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR---AFG 151
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-TKLGTLIHPINT 1010
+ +L+G+ Y H R + H +++P N+++ R ++K+ D G + + H + T
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVT 163
Query: 1011 PNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPE 1056
+ AP+VL + T D+WS G + +++GA F G SE +
Sbjct: 164 L--WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEAD 208
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
++ QLL+G+ Y H + H L P +LL+ G L + DFGL+R +FG
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR---AFG 151
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
+P Y VL L +H G H +++PDN+++ +S +KL D G ++ K
Sbjct: 165 VPEKWARFYTAEVVL-ALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKE 221
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + P++ +PEVL + + D WS GV Y +L G +PF S
Sbjct: 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ +G G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GGE+ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ + DFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIKVADFGFAKRV 191
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIK 181
Query: 523 LTDFGLSRRI 532
+ DFG ++R+
Sbjct: 182 VADFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 1122 AKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1179
AK V G W G P L APE++ + D W+ GVL Y + +G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 1180 SEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHENRWLVPSE 1237
+ + + + RF F ++ R L+ + KR + V + ++W ++
Sbjct: 242 QPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
Query: 1238 YM 1239
++
Sbjct: 302 WI 303
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
+P Y VL L +H G H +++PDN+++ +S +KL D G ++ K
Sbjct: 170 VPEKWARFYTAEVVL-ALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKE 226
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + P++ +PEVL + + D WS GV Y +L G +PF S
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPI 1008
+ ++ L +LH +G+ + +++ DNV++ KL D G C + + T
Sbjct: 128 FYAAEIISALMFLHDKGIIYRDLKLDNVLLD--HEGHCKLADFGMCKEGICNGVTTATFC 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
TP+ + APE+L E P D W+ GVL Y +L G +PF ++E + + +
Sbjct: 186 GTPD--YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 18/172 (10%)
Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK 228
G V + + D ++F LG+G G V A + +G YA KV+ K +
Sbjct: 9 GNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK------KDVIL 62
Query: 229 NELDIMNQLC----------HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYT 278
+ D+ + H L +L ++T D + E GG+L+ + + +
Sbjct: 63 QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD 122
Query: 279 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
E Y +++S L ++H I + L ++L+ H G H L DFG+ +
Sbjct: 123 EARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGMCK 172
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1188
APE+L E P D W+ GVL Y +L G +PF ++E + + +
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L+ + + + E Y +++S L ++H I + L ++L+ H G H L
Sbjct: 108 GGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG--HCKL 165
Query: 524 TDFGLSR 530
DFG+ +
Sbjct: 166 ADFGMCK 172
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
+P Y VL L +H G H +++PDN+++ +S +KL D G ++ K
Sbjct: 170 VPEKWARFYTAEVVL-ALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKE 226
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + P++ +PEVL + + D WS GV Y +L G +PF S
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNL 242
Y+ +++G G G V+ A R + A K + S E+ ++ +L H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
VRLHD + T++ E + + + ++ QLL GL + H ++
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
H L P +LL+ G L L DFGL+R +FG
Sbjct: 124 HRDLKPQNLLINRNG--ELKLADFGLAR---AFG 152
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
+ ++ QLL GL + H ++ H L P +LL+ G L L DFGL+R +FG
Sbjct: 103 VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKLADFGLAR---AFG 152
Score = 37.0 bits (84), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L GL + H R + H +++P N+++ R+ ++KL D G R + +
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLIN--RNGELKLADFG-LARAFGIPVRCYSAEVVTLW 166
Query: 1015 FAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ P+VL ++ + D+WSAG + L + A P
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 180 PITDAYDFG--DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMN 235
P+ D +F +++G G G+VY A + +G A K + + S E+ ++
Sbjct: 2 PLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSG 292
+L H N+V+L D T++ ++ E + L S T I Y+ QLL G
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 158
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 158
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 171 GRQVKTRTKPITD---AYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKS 225
+Q + P D Y+ ++G+G G V+ A R +G+ A K +M + +
Sbjct: 3 AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETK--------DSFTIISELAG---GGELLHSLTRQ 274
E+ I+ L H N+V L + TK S ++ + G L + L +
Sbjct: 63 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK- 121
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+T +I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R +
Sbjct: 122 --FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSL 177
Query: 335 FGKLNPLEYDVRYVRQALRHPWLNFADR 362
P Y R V R P L +R
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGER 205
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
+T +I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R +
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAK 179
Query: 537 KLNPLEYGN 545
P Y N
Sbjct: 180 NSQPNRYXN 188
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L+GL Y+H + H +++ NV++ R +KL D G R L P N
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLIT--RDGVLKLADFGLA-RAFSLAKNSQPNRYXNRV 190
Query: 1015 ----FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
+ PE+L E + P D+W AG + + + + +G +E
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-------------- 228
+ Y DE+G+G G+V A + YA KV++ K ++ F
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 229 ------------NELDIMNQLCHRNLVRLHDSYE--TKDSFTIISELAGGGELLHSLTRQ 274
E+ I+ +L H N+V+L + + +D ++ EL G ++ T +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+E Y + L+ G++Y+H I H + P +LLV G H+ + DFG+S
Sbjct: 133 PL-SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVS 184
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 938 LPIVIPTTHKDA-YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQ 996
+P + P + A + ++ G++YLH++ + H +I+P N+++ +K+ D G +
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG--EDGHIKIADFGVSN 185
Query: 997 RVTKLGTLIHPINT-PNPEFAAPEVLAE-EPIFP--QTDVWSAGVLAYVLLSGASPF 1049
L+ NT P F APE L+E IF DVW+ GV Y + G PF
Sbjct: 186 EFKGSDALLS--NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
Score = 38.5 bits (88), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
Y + L+ G++Y+H I H + P +LLV G H+ + DFG+S
Sbjct: 142 YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVS 184
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK----GNQYKSLFKNELDIMNQ 236
+ D Y+ + +G G G+V A R +G+ A K + N ++L EL I+
Sbjct: 53 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL--RELKILKH 110
Query: 237 LCHRNLVRLHDSY-------ETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQ 288
H N++ + D E K + ++ + LH + S T + +++ Q
Sbjct: 111 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESD---LHQIIHSSQPLTLEHVRYFLYQ 167
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
LL GL YMH + H L P +LLV L + DFG++R + +
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLCT 211
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 468 LHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LH + S T + +++ QLL GL YMH + H L P +LLV L + DF
Sbjct: 146 LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDF 203
Query: 527 GLSRRITS 534
G++R + +
Sbjct: 204 GMARGLCT 211
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-----CTQRVTKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + ++K+ D G CT +
Sbjct: 163 YFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLCTSPAEHQYFM 220
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
+ T + APE++ + Q D+WS G + +L+ F G++
Sbjct: 221 TEYVAT--RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 268
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
+P H Y L L YLH RG+ + +++ DNV++ S +KL D G C + +
Sbjct: 118 LPEEHARFYSAEISL-ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRP 174
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
T TPN + APE+L E D W+ GVL + +++G SPF
Sbjct: 175 GDTTSXFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLC-HR 240
+D +GRG V + + R YA KV+ + ++ + E + Q H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
LV LH ++T+ + E GG+L+ + RQ E Y ++ L+Y+H
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I + L ++L+ G H+ LTD+G+ +
Sbjct: 142 IIYRDLKLDNVLLDSEG--HIKLTDYGMCK 169
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L+ + RQ E Y ++ L+Y+H I + L ++L+ G H+ L
Sbjct: 105 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKL 162
Query: 524 TDFGLSR 530
TD+G+ +
Sbjct: 163 TDYGMCK 169
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APE+L E D W+ GVL + +++G SPF
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 171 GRQVKTRTKPITD---AYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKS 225
+Q + P D Y+ ++G+G G V+ A R +G+ A K +M + +
Sbjct: 2 AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 61
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETK--------DSFTIISELAG---GGELLHSLTRQ 274
E+ I+ L H N+V L + TK S ++ + G L + L +
Sbjct: 62 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK- 120
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+T +I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R +
Sbjct: 121 --FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSL 176
Query: 335 FGKLNPLEYDVRYVRQALRHPWLNFADR 362
P Y R V R P L +R
Sbjct: 177 AKNSQPNRYXNRVVTLWYRPPELLLGER 204
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
+T +I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R +
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAK 178
Query: 537 KLNPLEYGN 545
P Y N
Sbjct: 179 NSQPNRYXN 187
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L+GL Y+H + H +++ NV++ R +KL D G R L P N
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLIT--RDGVLKLADFGLA-RAFSLAKNSQPNRYXNRV 189
Query: 1015 ----FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
+ PE+L E + P D+W AG + + + + +G +E
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 234
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
+P H Y L L YLH RG+ + +++ DNV++ S +KL D G C + +
Sbjct: 107 LPEEHARFYSAEISL-ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRP 163
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR--GQSEPETR 1058
T TPN + APE+L E D W+ GVL + +++G SPF G S+
Sbjct: 164 GDTTSXFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD-NPD 220
Query: 1059 QNVNFVRYRFEYLFKELTQEATR 1081
QN +YLF+ + ++ R
Sbjct: 221 QNTE------DYLFQVILEKQIR 237
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLC-HR 240
+D +GRG V + + R YA KV+ + ++ + E + Q H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
LV LH ++T+ + E GG+L+ + RQ E Y ++ L+Y+H
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I + L ++L+ G H+ LTD+G+ +
Sbjct: 131 IIYRDLKLDNVLLDSEG--HIKLTDYGMCK 158
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L+ + RQ E Y ++ L+Y+H I + L ++L+ G H+ L
Sbjct: 94 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKL 151
Query: 524 TDFGLSR 530
TD+G+ +
Sbjct: 152 TDYGMCK 158
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR--GQSEPETRQNVNFVRYRFEYLFKE 1201
APE+L E D W+ GVL + +++G SPF G S+ QN +YLF+
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD-NPDQNTE------DYLFQV 230
Query: 1202 LTQEATR 1208
+ ++ R
Sbjct: 231 ILEKQIR 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
P Y ++DGL+YLH +G+ H +I+P N+++ + G T +++ L
Sbjct: 106 FPVCQAHGY-FCQLIDGLEYLHSQGIVHKDIKPGNLLLTT-----------GGTLKISAL 153
Query: 1002 GT--LIHPI--------NTPNPEFAAPEVLAEEPIFP--QTDVWSAGVLAYVLLSGASPF 1049
G +HP + +P F PE+ F + D+WSAGV Y + +G PF
Sbjct: 154 GVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
Query: 1050 RGQSEPETRQNVN 1062
G + + +N+
Sbjct: 214 EGDNIYKLFENIG 226
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---------TGKGNQYKSLFKNEL 231
+ Y GD LG G G V ++ + A K++ G+ N K E+
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEAN-----VKKEI 57
Query: 232 DIMNQLCHRNLVRLHDSY--ETKDSFTIISE--LAGGGELLHSLTRQSYYTEYDIAH-YI 286
++ +L H+N+++L D E K ++ E + G E+L S+ + + AH Y
Sbjct: 58 QLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQ--AHGYF 115
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
QL+ GL+Y+H I H + PG+LL+ G L ++ G++ + F
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTT--GGTLKISALGVAEALHPF 162
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 535
Y QL+ GL+Y+H I H + PG+LL+ G L ++ G++ + F
Sbjct: 114 YFCQLIDGLEYLHSQGIVHKDIKPGNLLLTT--GGTLKISALGVAEALHPF 162
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 1143 QAPEVLAEEPIFP--QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200
Q PE+ F + D+WSAGV Y + +G PF G + + +N+ Y
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---G 234
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + L + + P KR ++ + ++ W
Sbjct: 235 DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
+P H Y L L YLH RG+ + +++ DNV++ S +KL D G C + +
Sbjct: 103 LPEEHARFYSAEISL-ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRP 159
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR--GQSEPETR 1058
T TPN + APE+L E D W+ GVL + +++G SPF G S+
Sbjct: 160 GDTTSXFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD-NPD 216
Query: 1059 QNVNFVRYRFEYLFKELTQEATR 1081
QN +YLF+ + ++ R
Sbjct: 217 QNTE------DYLFQVILEKQIR 233
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLC-HR 240
+D +GRG V + + R YA KV+ + ++ + E + Q H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
LV LH ++T+ + E GG+L+ + RQ E Y ++ L+Y+H
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I + L ++L+ G H+ LTD+G+ +
Sbjct: 127 IIYRDLKLDNVLLDSEG--HIKLTDYGMCK 154
Score = 33.5 bits (75), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L+ + RQ E Y ++ L+Y+H I + L ++L+ G H+ L
Sbjct: 90 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKL 147
Query: 524 TDFGLSR 530
TD+G+ +
Sbjct: 148 TDYGMCK 154
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR--GQSEPETRQNVNFVRYRFEYLFKE 1201
APE+L E D W+ GVL + +++G SPF G S+ QN +YLF+
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD-NPDQNTE------DYLFQV 226
Query: 1202 LTQEATR 1208
+ ++ R
Sbjct: 227 ILEKQIR 233
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 171 GRQVKTRTKPITD---AYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKS 225
+Q + P D Y+ ++G+G G V+ A R +G+ A K +M + +
Sbjct: 3 AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETKDS------------FTIIS-ELAGGGELLHSLT 272
E+ I+ L H N+V L + TK S F +LAG LL ++
Sbjct: 63 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAG---LLSNVL 119
Query: 273 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ +T +I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R
Sbjct: 120 VK--FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAF 175
Query: 333 TSFGKLNPLEYDVRYVRQALRHPWLNFADR 362
+ P Y R V R P L +R
Sbjct: 176 SLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
+T +I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R +
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAK 179
Query: 537 KLNPLEYGN 545
P Y N
Sbjct: 180 NSQPNRYXN 188
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L+GL Y+H + H +++ NV++ R +KL D G R L P N
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLIT--RDGVLKLADFGLA-RAFSLAKNSQPNRYXNRV 190
Query: 1015 ----FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
+ PE+L E + P D+W AG + + + + +G +E
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK----GNQYKSLFKNELDIMNQ 236
+ D Y+ + +G G G+V A R +G+ A K + N ++L EL I+
Sbjct: 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL--RELKILKH 109
Query: 237 LCHRNLVRLHDSY-------ETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQ 288
H N++ + D E K + ++ + LH + S T + +++ Q
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESD---LHQIIHSSQPLTLEHVRYFLYQ 166
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
LL GL YMH + H L P +LLV L + DFG++R + +
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLCT 210
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ +++ QLL GL YMH + H L P +LLV L + DFG++R + +
Sbjct: 160 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLCT 210
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-----CTQRVTKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + ++K+ D G CT +
Sbjct: 162 YFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLCTSPAEHQYFM 219
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063
+ T + APE++ + Q D+WS G + +L+ F G++ Q +
Sbjct: 220 TEYVAT--RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 277
Query: 1064 V 1064
V
Sbjct: 278 V 278
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSLFKN-ELDIMNQLCHRNLVRL--- 245
+G G G+VY A SG A KV+ GK FKN EL IM +L H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------FKNRELQIMRKLDHCNIVRLRYF 81
Query: 246 -HDSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHR 298
+ S E KD + L ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHS 140
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
I H + P +LL+ P L L DFG ++++ G+ N RY R
Sbjct: 141 FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 189
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + AP
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 191
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
E++ + + DVWSAG + LL G F G S
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 33.9 bits (76), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 171 GRQVKTRTKPITD---AYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKS 225
+Q + P D Y+ ++G+G G V+ A R +G+ A K +M + +
Sbjct: 3 AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETK--------DSFTIISELAG---GGELLHSLTRQ 274
E+ I+ L H N+V L + TK S ++ + G L + L +
Sbjct: 63 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK- 121
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+T +I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R +
Sbjct: 122 --FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSL 177
Query: 335 FGKLNPLEYDVRYVRQALRHPWLNFADR 362
P Y R V R P L +R
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGER 205
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
+T +I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R +
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAK 179
Query: 537 KLNPLEYGN 545
P Y N
Sbjct: 180 NSQPNRYXN 188
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L+GL Y+H + H +++ NV++ R +KL D G R L P N
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLIT--RDGVLKLADFGLA-RAFSLAKNSQPNRYXNRV 190
Query: 1015 ----FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
+ PE+L E + P D+W AG + + + + +G +E
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCH 239
D ++ G LG+G G VY A E+ S A KV+ + + + + E++I L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
N++RL++ + + +I E A GEL L + + E A + +L L Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS------RRITSFGKLNPL 341
+ H + P +LL+ L + DFG S RR T G L+ L
Sbjct: 143 KVIHRDIKPENLLLG--LKGELKIADFGWSVHAPSLRRKTMCGTLDYL 188
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT------QRVTK 1000
+ A + + D L Y H + + H +I+P+N+++ +++ D G + +R T
Sbjct: 124 RTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIA--DFGWSVHAPSLRRKTM 181
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GTL ++ PE++ + D+W GVL Y LL G PF S ET +
Sbjct: 182 CGTL---------DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRR 232
Query: 1061 VNFVRYRF 1068
+ V +F
Sbjct: 233 IVKVDLKF 240
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1195
+ D+W GVL Y LL G PF S ET + + V +F
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKF 240
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
+P H Y L L YLH RG+ + +++ DNV++ S +KL D G C + +
Sbjct: 150 LPEEHARFYSAEISL-ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRP 206
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
T TPN + APE+L E D W+ GVL + +++G SPF
Sbjct: 207 GDTTSTFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLC-HR 240
+D +GRG V + + R YA +V+ + ++ + E + Q H
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
LV LH ++T+ + E GG+L+ + RQ E Y ++ L+Y+H
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I + L ++L+ G H+ LTD+G+ +
Sbjct: 174 IIYRDLKLDNVLLDSEG--HIKLTDYGMCK 201
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG+L+ + RQ E Y ++ L+Y+H I + L ++L+ G H+ L
Sbjct: 137 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKL 194
Query: 524 TDFGLSR 530
TD+G+ +
Sbjct: 195 TDYGMCK 201
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APE+L E D W+ GVL + +++G SPF
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAK------VMTGKGNQYKSLFKNELDIMNQLCHRNLV 243
++GRG VY A G A K +M K ++ E+D++ QL H N++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA---RADCIKEIDLLKQLNHPNVI 95
Query: 244 RLHDSYETKDSFTIISELAGGGEL----LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
+ + S+ + I+ ELA G+L H ++ E + Y QL S L++MH
Sbjct: 96 KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR 155
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ H + P ++ + G + L D GL R +S
Sbjct: 156 RVMHRDIKPANVFITATGV--VKLGDLGLGRFFSS 188
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ L+++H R + H +I+P NV + + V KL DLG + + T H +
Sbjct: 143 VQLCSALEHMHSRRVMHRDIKPANVFITATGVV--KLGDLGLGRFFSSKTTAAHSL-VGT 199
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
P + +PE + E ++D+WS G L Y + + SPF G
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ +G G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GG++ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ + DFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIKVADFGFAKRV 191
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGG++ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIK 181
Query: 523 LTDFGLSRRI 532
+ DFG ++R+
Sbjct: 182 VADFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 1122 AKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1179
AK V G W G P L APE++ + D W+ GVL Y + +G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 1180 SEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHENRWLVPSE 1237
+ + + + RF F ++ R L+ + KR + V + ++W ++
Sbjct: 242 QPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
Query: 1238 YM 1239
++
Sbjct: 302 WI 303
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
D ++ +G G G V +G +YA K++ K Q + NE I+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
LV+L S++ + ++ E GG++ L R ++E Y Q++ +Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L + + L P +LL+ G ++ + DFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIKVADFGFAKRV 191
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
H Y VL +YLH L + +++P+N+++ + +K+ D G +RV G
Sbjct: 142 HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
TP E+ APE++ + D W+ GVL Y + +G PF + + + +
Sbjct: 197 XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
RF F ++ R L+ +
Sbjct: 255 VRFPSHFSSDLKDLLRNLLQV 275
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGG++ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 PGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIK 181
Query: 523 LTDFGLSRRI 532
+ DFG ++R+
Sbjct: 182 VADFGFAKRV 191
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 1122 AKNVIG--WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1179
AK V G W G P L APE++ + D W+ GVL Y + +G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYL------APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
Query: 1180 SEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI--FKRAPGKRPTVEECHENRWLVPSE 1237
+ + + + RF F ++ R L+ + KR + V + ++W ++
Sbjct: 242 QPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301
Query: 1238 YM 1239
++
Sbjct: 302 WI 303
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNL 242
Y+ +++G G G V+ A R + A K + S E+ ++ +L H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
VRLHD + T++ E + + + ++ QLL GL + H ++
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
H L P +LL+ G L L +FGL+R +FG
Sbjct: 124 HRDLKPQNLLINRNG--ELKLANFGLAR---AFG 152
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
+ ++ QLL GL + H ++ H L P +LL+ G L L +FGL+R +FG
Sbjct: 103 VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANFGLAR---AFG 152
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVR 244
F E+GRG VY ++ + A + + + FK E + + L H N+VR
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 245 LHDSYET----KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
+DS+E+ K +++EL G L L R + + RQ+L GL ++H +
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 301 --IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR-RITSFGK 337
I H L ++ + P G + + D GL+ + SF K
Sbjct: 150 PPIIHRDLKCDNIFITGPTG-SVKIGDLGLATLKRASFAK 188
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 599 QFISEIHRGKFSVVVKAAEKANTENLVAAKLFE--YSHDTLHQVNTEFDNLRSLRHERIA 656
+F EI RG F V K + T + +L + + + E + L+ L+H I
Sbjct: 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV 88
Query: 657 SLLEAYKPSTTASNIAVLVMEKLQGADVLSYL 688
++++ + VLV E + +YL
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYL 120
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 176
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
I H + P +LL+ P L L DFG ++++ G+ N RY R
Sbjct: 177 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 223
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + AP
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 225
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
E++ + + DVWSAG + LL G F G S
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 207
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
I H + P +LL+ P L L DFG ++++ G+ N RY R
Sbjct: 151 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 197
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + A
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 198
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
PE++ + + DVWSAG + LL G F G S
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 182
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
D +G+G G VY ++ + A K++ + + E+ +++Q + R
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
SY II E GGG L L + E IA +R++L GLDY+H H +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSAL-DLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
++L++ G + L DFG++ ++T
Sbjct: 144 AANVLLSEQG--DVKLADFGVAGQLT 167
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 938 LPIVIPTTHKDAYCVT---SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC 994
L ++ P ++ Y T +L GL YLH H +I+ NV+++ VKL D G
Sbjct: 105 LDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS--EQGDVKLADFGV 162
Query: 995 TQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
++T + P + APEV+ + + D+WS G+ A L G P
Sbjct: 163 AGQLTDT-QIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L + E IA +R++L GLDY+H H + ++L++ G + L
Sbjct: 100 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVKL 157
Query: 524 TDFGLSRRIT 533
DFG++ ++T
Sbjct: 158 ADFGVAGQLT 167
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 161
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
I H + P +LL+ P L L DFG ++++ G+ N RY R
Sbjct: 162 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 208
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + A
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 209
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
PE++ + + DVWSAG + LL G F G S
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 193
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 154
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
I H + P +LL+ P L L DFG ++++ G+ N RY R
Sbjct: 155 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 201
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + AP
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 203
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
E++ + + DVWSAG + LL G F G S
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Score = 34.3 bits (77), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 186
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 170
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
I H + P +LL+ P L L DFG ++++
Sbjct: 171 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 201
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 213
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 201
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 176
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
I H + P +LL+ P L L DFG ++++
Sbjct: 177 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 207
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 219
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 207
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 142
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
I H + P +LL+ P L L DFG ++++ G+ N RY R
Sbjct: 143 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 189
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + A
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 190
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
PE++ + + DVWSAG + LL G F G S
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 155
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H + P +LL+ P L L DFG ++++
Sbjct: 156 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 187
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYIC 197
Query: 1018 PEVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
Score = 34.3 bits (77), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 187
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 142
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H + P +LL+ P L L DFG ++++
Sbjct: 143 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + A
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 190
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
PE++ + + DVWSAG + LL G F G S
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 142
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H + P +LL+ P L L DFG ++++
Sbjct: 143 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYIC 184
Query: 1018 PEVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 143
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H + P +LL+ P L L DFG ++++
Sbjct: 144 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 175
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + A
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 191
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
PE++ + + DVWSAG + LL G F G S
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 175
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L + S T I Y+ QLL GL + H + H
Sbjct: 72 DVIHTENKLYLVFEFLH--QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
Score = 37.4 bits (85), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E L S T I Y+ QLL GL + H + H
Sbjct: 72 DVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 178
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
I H + P +LL+ P L L DFG ++++
Sbjct: 179 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 209
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 221
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 209
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 154
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
I H + P +LL+ P L L DFG ++++ G+ N RY R
Sbjct: 155 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 201
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + AP
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 203
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
E++ + + DVWSAG + LL G F G S
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 186
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E L S T I Y+ QLL GL + H + H
Sbjct: 72 DVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 130 RDLKPENLLINTEGA--IKLADFGLAR---AFG 157
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA--IKLADFGLAR---AFG 157
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 15/194 (7%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSLFKN--- 229
VK+R K Y+ D LG G VY A ++++ + A K+ G ++ K
Sbjct: 5 VKSRAK----RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 230 -ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
E+ ++ +L H N++ L D++ K + +++ + + T I Y+
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYV 348
L GL+Y+H+ I H L P +LL+ G L L DFGL++ SFG N Y + V
Sbjct: 121 TLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAK---SFGSPNR-AYXHQVV 174
Query: 349 RQALRHPWLNFADR 362
+ R P L F R
Sbjct: 175 TRWYRAPELLFGAR 188
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 537
T I Y+ L GL+Y+H+ I H L P +LL+ G L L DFGL++ SFG
Sbjct: 110 TPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAK---SFGS 164
Query: 538 LN 539
N
Sbjct: 165 PN 166
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 24/115 (20%)
Query: 940 IVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT 999
+V+ +H AY + + L GL+YLH + H +++P+N+++ + +KL D G
Sbjct: 107 LVLTPSHIKAYMLMT-LQGLEYLHQHWILHRDLKPNNLLLDE--NGVLKLADFG------ 157
Query: 1000 KLGTLIHPINTPNPEFA---------APEVLAEEPIFP-QTDVWSAG-VLAYVLL 1043
L +PN + APE+L ++ D+W+ G +LA +LL
Sbjct: 158 ----LAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL 208
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-----DTLHQVNT-EFDNLRSL 650
+Y+ + + G+F+ V KA +K NT +VA K + H D +++ E L+ L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 651 RHERIASLLEAY 662
H I LL+A+
Sbjct: 70 SHPNIIGLLDAF 81
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG+G + + + +A K++ K +Q + + E+ I L H+++V H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 105
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
+E D ++ EL LL R+ TE + +Y+RQ++ G Y+HR + H L
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
G+L + + + DFGL+ ++
Sbjct: 166 KLGNLFLNE--DLEVKIGDFGLATKV 189
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y + ++ G QYLH + H +++ N+ + ++VK+ D G +V G +
Sbjct: 143 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGER-KKVL 199
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
P + APEVL+++ + DVWS G + Y LL G PF ET
Sbjct: 200 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 247
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL+++ + DVWS G + Y LL G PF ET + Y K +
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 263
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A + + + P RPT+ E
Sbjct: 264 PVAASLIQKMLQTDPTARPTINE 286
Score = 38.5 bits (88), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +Y+RQ++ G Y+HR + H L G+L +
Sbjct: 126 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----------- 174
Query: 527 GLSRRITSFGKLNPLEYGNGQYKVAV-TPAMKHLQAITEAGHT 568
L +I FG +EY + KV TP + +++ GH+
Sbjct: 175 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-NELDIMNQLCHRNLVRLHD 247
D+LG G VY + + A K + + + E+ ++ L H N+V LHD
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
T+ S T++ E + + +++ ++ QLL GL Y HR + H L
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 308 PGDLLVAHPGGRHLLLTDFGLSR 330
P +LL+ G L L DFGL+R
Sbjct: 128 PQNLLINERG--ELKLADFGLAR 148
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 480 YDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
+++ ++ QLL GL Y HR + H L P +LL+ G L L DFGL+R
Sbjct: 100 HNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG--ELKLADFGLAR 148
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
I H + +L GL Y H + + H +++P N+++ ++KL D G R +
Sbjct: 96 IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN--ERGELKLADFGLA-RAKSI 152
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFP-QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
T + + P++L + Q D+W G + Y + +G F G + E
Sbjct: 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG+G + + + +A K++ K +Q + + E+ I L H+++V H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 87
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
+E D ++ EL LL R+ TE + +Y+RQ++ G Y+HR + H L
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
G+L + + + DFGL+ ++
Sbjct: 148 KLGNLFLNE--DLEVKIGDFGLATKV 171
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG----TLI 1005
Y + ++ G QYLH + H +++ N+ + ++VK+ D G +V G TL
Sbjct: 125 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKTLC 182
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
TPN + APEVL+++ + DVWS G + Y LL G PF ET
Sbjct: 183 ---GTPN--YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 229
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL+++ + DVWS G + Y LL G PF ET + Y K +
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 245
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A + + + P RPT+ E
Sbjct: 246 PVAASLIQKMLQTDPTARPTINE 268
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +Y+RQ++ G Y+HR + H L G+L +
Sbjct: 108 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----------- 156
Query: 527 GLSRRITSFGKLNPLEY-GNGQYKVAVTPAMKHLQAITEAGHT 568
L +I FG +EY G + + TP + +++ GH+
Sbjct: 157 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 199
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E L S T I Y+ QLL GL + H + H
Sbjct: 70 DVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 128 RDLKPENLLINTEGA--IKLADFGLAR---AFG 155
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA--IKLADFGLAR---AFG 155
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 180
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
I H + P +LL+ P L L DFG ++++
Sbjct: 181 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 211
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 223
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 211
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG+G + + + +A K++ K +Q + + E+ I L H+++V H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 107
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
+E D ++ EL LL R+ TE + +Y+RQ++ G Y+HR + H L
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
G+L + + + DFGL+ ++
Sbjct: 168 KLGNLFLNE--DLEVKIGDFGLATKV 191
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y + ++ G QYLH + H +++ N+ + ++VK+ D G +V G +
Sbjct: 145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGER-KKVL 201
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
P + APEVL+++ + DVWS G + Y LL G PF ET
Sbjct: 202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 249
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL+++ + DVWS G + Y LL G PF ET + Y K +
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 265
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A + + + P RPT+ E
Sbjct: 266 PVAASLIQKMLQTDPTARPTINE 288
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +Y+RQ++ G Y+HR + H L G+L +
Sbjct: 128 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----------- 176
Query: 527 GLSRRITSFGKLNPLEYGNGQYKVAV-TPAMKHLQAITEAGHT 568
L +I FG +EY + KV TP + +++ GH+
Sbjct: 177 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E L S T I Y+ QLL GL + H + H
Sbjct: 71 DVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 129 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 156
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 156
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 142
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
I H + P +LL+ P L L DFG ++++
Sbjct: 143 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + A
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 190
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
PE++ + + DVWSAG + LL G F G S
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 147
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
I H + P +LL+ P L L DFG ++++
Sbjct: 148 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 178
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 190
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 178
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 146
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
I H + P +LL+ P L L DFG ++++ G+ N RY R
Sbjct: 147 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 193
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + + I + + AP
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 195
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
E++ + + DVWSAG + LL G F G S
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
Score = 33.9 bits (76), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 178
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 68 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
Score = 37.0 bits (84), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 68 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
Score = 37.0 bits (84), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
Score = 37.0 bits (84), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 72 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 71 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 129 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 156
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 156
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 71 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 129 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 156
Score = 36.6 bits (83), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 156
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG+G + + + +A K++ K +Q + + E+ I L H+++V H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
+E D ++ EL LL R+ TE + +Y+RQ++ G Y+HR + H L
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
G+L + + + DFGL+ ++
Sbjct: 144 KLGNLFLNE--DLEVKIGDFGLATKV 167
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG----TLI 1005
Y + ++ G QYLH + H +++ N+ + ++VK+ D G +V G TL
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKTLC 178
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
TPN + APEVL+++ + DVWS G + Y LL G PF ET
Sbjct: 179 ---GTPN--YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL+++ + DVWS G + Y LL G PF ET + Y K +
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 241
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A + + + P RPT+ E
Sbjct: 242 PVAASLIQKMLQTDPTARPTINE 264
Score = 37.0 bits (84), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +Y+RQ++ G Y+HR + H L G+L +
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----------- 152
Query: 527 GLSRRITSFGKLNPLEY-GNGQYKVAVTPAMKHLQAITEAGHT 568
L +I FG +EY G + + TP + +++ GH+
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
Score = 36.6 bits (83), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 68 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 76 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 134 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 161
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 112 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 161
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG+G + + + +A K++ K +Q + + E+ I L H+++V H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
+E D ++ EL LL R+ TE + +Y+RQ++ G Y+HR + H L
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
G+L + + + DFGL+ ++
Sbjct: 144 KLGNLFLNE--DLEVKIGDFGLATKV 167
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG----TLI 1005
Y + ++ G QYLH + H +++ N+ + ++VK+ D G +V G TL
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKTLC 178
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
TPN + APEVL+++ + DVWS G + Y LL G PF ET
Sbjct: 179 ---GTPN--YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL+++ + DVWS G + Y LL G PF ET + Y K +
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 241
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A + + + P RPT+ E
Sbjct: 242 PVAASLIQKMLQTDPTARPTINE 264
Score = 37.0 bits (84), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +Y+RQ++ G Y+HR + H L G+L +
Sbjct: 104 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----------- 152
Query: 527 GLSRRITSFGKLNPLEY-GNGQYKVAVTPAMKHLQAITEAGHT 568
L +I FG +EY G + + TP + +++ GH+
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
Score = 36.6 bits (83), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 68 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
Score = 36.6 bits (83), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
+G G G+VY A SG A K K Q K EL IM +L H N+VRL +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
S E KD + L E ++ + R Q+ Y + Y+ QL L Y+H
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 221
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
I H + P +LL+ P L L DFG ++++
Sbjct: 222 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 252
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
L Y+H G+CH +I+P N+++ +V +KL D G +++ + PN +
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 264
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
A E IF T DVWSAG + LL G F G S
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 252
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 71 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 129 RDLKPENLLINTEGA--IKLADFGLAR---AFG 156
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 107 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA--IKLADFGLAR---AFG 156
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 70 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 128 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 155
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 155
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 70 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 128 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 155
Score = 36.6 bits (83), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 155
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 76 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 134 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 161
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 112 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 161
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 72 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G G V AV+ +G A K + + + EL ++ + H N++ L D
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 249 Y---ETKDSFT-IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ ET D FT + G L L + E I + Q+L GL Y+H I H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L PG+L V L + DFGL+R+ S
Sbjct: 153 DLKPGNLAVNEDC--ELKILDFGLARQADS 180
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--LGTLIHP 1007
+ V +L GL+Y+H G+ H +++P N +A ++K++D G ++ G ++
Sbjct: 132 FLVYQMLKGLRYIHAAGIIHRDLKPGN--LAVNEDCELKILDFGLARQADSEMXGXVV-- 187
Query: 1008 INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ + QT D+WS G + +++G + F+G
Sbjct: 188 ----TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L L + E I + Q+L GL Y+H I H L PG+L V L +
Sbjct: 113 GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--ELKIL 170
Query: 525 DFGLSRRITS 534
DFGL+R+ S
Sbjct: 171 DFGLARQADS 180
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNL 242
Y+ + +G G V A +G A K+M G+ + K E++ + L H+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRI-KTEIEALKNLRHQHI 70
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
+L+ ET + ++ E GGEL + Q +E + RQ++S + Y+H A
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYA 130
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
H L P +LL L L DFGL +
Sbjct: 131 HRDLKPENLLFDE--YHKLKLIDFGLCAK 157
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ + Y+H +G H +++P+N++ ++KLID G + +
Sbjct: 117 IVSAVAYVHSQGYAHRDLKPENLLFDEYH--KLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 1015 FAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+AAPE++ + + + DVWS G+L YVL+ G PF
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
Score = 37.7 bits (86), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGGEL + Q +E + RQ++S + Y+H AH L P +LL L
Sbjct: 91 PGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDE--YHKLK 148
Query: 523 LTDFGLSRR 531
L DFGL +
Sbjct: 149 LIDFGLCAK 157
Score = 37.4 bits (85), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 1144 APEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APE++ + + + DVWS G+L YVL+ G PF + + + +Y K L
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVP---KWL 233
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
+ + L + + P KR +++ + W++
Sbjct: 234 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 265
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG+G + + + +A K+ + K +Q + + E+ I L H+++V H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 81
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
+E D ++ EL LL R+ TE + +Y+RQ++ G Y+HR + H L
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
G+L + + + DFGL+ ++
Sbjct: 142 KLGNLFLNE--DLEVKIGDFGLATKV 165
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y + ++ G QYLH + H +++ N+ + ++VK+ D G +V G +
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGER-KKVL 175
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
P + APEVL+++ + DVWS G + Y LL G PF ET
Sbjct: 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL+++ + DVWS G + Y LL G PF ET + Y K +
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 239
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A + + + P RPT+ E
Sbjct: 240 PVAASLIQKMLQTDPTARPTINE 262
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +Y+RQ++ G Y+HR + H L G+L +
Sbjct: 102 LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----------- 150
Query: 527 GLSRRITSFGKLNPLEYGNGQYKVAV-TPAMKHLQAITEAGHT 568
L +I FG +EY + KV TP + +++ GH+
Sbjct: 151 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 70 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 128 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 155
Score = 36.6 bits (83), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 155
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
Score = 37.0 bits (84), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 73 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 130
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 131 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 158
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 158
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLC 238
+ + Y +++G G G+VY A + S GR A K + + S E+ ++ +L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMH 297
H N+V L D ++ T++ E +L L ++ + I Y+ QLL G+ + H
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+ I H L P +LL+ G L L DFGL+R +FG
Sbjct: 137 QHRILHRDLKPQNLLINSDGA--LKLADFGLAR---AFG 170
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL G+ + H+ I H L P +LL+ G L L DFGL+R +FG
Sbjct: 121 IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA--LKLADFGLAR---AFG 170
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 70 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 128 RDLKPENLLINTEGA--IKLADFGLAR---AFG 155
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 106 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA--IKLADFGLAR---AFG 155
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPENLLINTEGA--IKLADFGLAR---AFG 154
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGA--IKLADFGLAR---AFG 154
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLC 238
+ + Y +++G G G+VY A + S GR A K + + S E+ ++ +L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMH 297
H N+V L D ++ T++ E +L L ++ + I Y+ QLL G+ + H
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+ I H L P +LL+ G L L DFGL+R +FG
Sbjct: 137 QHRILHRDLKPQNLLINSDGA--LKLADFGLAR---AFG 170
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL G+ + H+ I H L P +LL+ G L L DFGL+R +FG
Sbjct: 121 IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA--LKLADFGLAR---AFG 170
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L + S T I Y+ QLL GL + H + H
Sbjct: 68 DVIHTENKLYLVFEHVH--QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K + + S E+ ++ +L H N+V+L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 72 DVIHTENKLYLVFEHVD--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
Score = 36.6 bits (83), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 157
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNE 230
QV T + Y +G G GIV A + G N A K ++ + + E
Sbjct: 12 QVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRE 71
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIR 287
L ++ + H+N++ L + + + + ++ EL+ + Q + E D +++ +
Sbjct: 72 LVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY 131
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
Q+L G+ ++H I H L P +++V +L DFGL+R ++ + P
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTASTNFMMTP 182
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLA-RTASTNFMMTPY 183
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ D+WS G + L+ G+ F+G
Sbjct: 184 VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 225
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q + E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 107 ELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 166
Query: 523 LTDFGLSRRITSFGKLNP 540
DFGL+R ++ + P
Sbjct: 167 --DFGLARTASTNFMMTP 182
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
+++G+G G V+ ++ + + A K++ + + E+ +++Q + + +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
SY II E GGG L L E IA +R++L GLDY+H H +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
++L++ G + L DFG++ ++T
Sbjct: 147 AANVLLSEHG--EVKLADFGVAGQLT 170
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
A + +L GL YLH H +I+ NV+++ +VKL D G ++T +
Sbjct: 122 ATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDT-QIKRNX 178
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
P + APEV+ + + D+WS G+ A L G P
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
E IA +R++L GLDY+H H + ++L++ G + L DFG++ ++T
Sbjct: 118 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLT 170
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV-RYRFEYLFKEL 1202
APEV+ + + D+WS G+ A L G P SE + + + + L
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLFLIPKNNPPTLEGNY 243
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHD 1262
++ F+ + P RPT +E L+ +++++ ++ + L E D Y
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKE------LLKHKFILRNAKKTSY----LTELIDRYKR 293
Query: 1263 LKNKQFTSDS 1272
K +Q DS
Sbjct: 294 WKAEQSHDDS 303
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
+++G+G G V+ ++ + + A K++ + + E+ +++Q + + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
SY II E GGG L L E IA +R++L GLDY+H H +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
++L++ G + L DFG++ ++T
Sbjct: 132 AANVLLSEHG--EVKLADFGVAGQLT 155
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
A + +L GL YLH H +I+ NV+++ +VKL D G ++T +
Sbjct: 107 ATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDT-QIKRNX 163
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
P + APEV+ + + D+WS G+ A L G P
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
E IA +R++L GLDY+H H + ++L++ G + L DFG++ ++T
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLT 155
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
+++G+G G V+ ++ + + A K++ + + E+ +++Q + + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
SY II E GGG L L E IA +R++L GLDY+H H +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
++L++ G + L DFG++ ++T
Sbjct: 132 AANVLLSEHG--EVKLADFGVAGQLT 155
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----KLGTL 1004
A + +L GL YLH H +I+ NV+++ +VKL D G ++T K T
Sbjct: 107 ATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTF 164
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
+ P + APEV+ + + D+WS G+ A L G P
Sbjct: 165 VG-----TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
E IA +R++L GLDY+H H + ++L++ G + L DFG++ ++T
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLT 155
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQ 236
I+ + LG G G+V A + +G A K + K LF E+ I+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKH 65
Query: 237 LCHRNLVRLH-----DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
H N++ + DS+E + II EL LH + ++ I ++I Q L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ +H ++ H L P +LL+ L + DFGL+R I
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLIN--SNCDLKVCDFGLARII 162
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQ 236
I+ + LG G G+V A + +G A K + K LF E+ I+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKH 65
Query: 237 LCHRNLVRLH-----DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
H N++ + DS+E + II EL LH + ++ I ++I Q L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ +H ++ H L P +LL+ L + DFGL+R I
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLIN--SNCDLKVCDFGLARII 162
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQ 236
I+ + LG G G+V A + +G A K + K LF E+ I+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKH 65
Query: 237 LCHRNLVRLH-----DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
H N++ + DS+E + II EL LH + ++ I ++I Q L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ +H ++ H L P +LL+ L + DFGL+R I
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLIN--SNCDLKVCDFGLARII 162
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
G Q+K I D Y + LG G+ G V + + +A K++ + K+ +
Sbjct: 7 GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREV 61
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQS--YYTEYDIA 283
EL C ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 62 ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRIT 333
++ + + Y+H ++IAH + P +LL +L LTDFG ++ T
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
+ S+ + +QYLH + H +++P+N++ S R + +KL D G + T
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG---------- 172
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
E D+WS GV+ Y+LL G PF
Sbjct: 173 -------------EKYDKSCDMWSLGVIMYILLCGYPPF 198
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 1157 TDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYLFKELTQEATRFLM 1211
D+WS GV+ Y+LL G PF P + + +Y F + E+++E +
Sbjct: 179 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 238
Query: 1212 LIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHDLKNKQFTS 1270
+ K P +R T+ E + W++ S K + + LKE + + D+K + ++
Sbjct: 239 NLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKERWEDVKEEMTSA 294
Score = 37.4 bits (85), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 464 GGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
Query: 522 L-LTDFGLSRRIT 533
L LTDFG ++ T
Sbjct: 159 LKLTDFGFAKETT 171
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
+P Y VL L +H GL H +++PDN+++ + +KL D G ++ +
Sbjct: 171 VPEKWAKFYTAEVVL-ALDAIHSMGLIHRDVKPDNMLLD--KHGHLKLADFGTCMKMDET 227
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + P++ +PEVL + + D WS GV + +L G +PF S
Sbjct: 228 GMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 170 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----S 225
RG Q+K YD +GRG G V ++S + YA K+++ K K +
Sbjct: 68 RGLQMKAED------YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLS-KFEMIKRSDSA 120
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY 285
F E DIM +V+L +++ ++ E GG+L++ ++ ++ Y
Sbjct: 121 FFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKW-AKFY 179
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+++ LD +H + + H + P ++L+ G HL L DFG ++ G
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKLADFGTCMKMDETG 228
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
+GRG G+V A R+ ++ A K + + + F EL ++++ H N+V+L+ +
Sbjct: 17 VGRGAFGVVCKAKWRA--KDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGA-- 70
Query: 251 TKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL---SIAHL 304
+ ++ E A GG L LH YYT + Q G+ Y+H + ++ H
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L P +LL+ GG L + DFG + I +
Sbjct: 131 DLKPPNLLLVA-GGTVLKICDFGTACDIQT 159
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 464 GGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL---SIAHLGLTPGDLLVAHPG 517
GG L LH YYT + Q G+ Y+H + ++ H L P +LL+ G
Sbjct: 84 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA-G 142
Query: 518 GRHLLLTDFGLSRRITS 534
G L + DFG + I +
Sbjct: 143 GTVLKICDFGTACDIQT 159
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 944 TTHKDAYCVTSVLDGLQYLHW---RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
H ++C+ G+ YLH + L H +++P N+++ + +V +K+ D G +
Sbjct: 102 AAHAMSWCLQCS-QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV-LKICDFGTACDIQT 159
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058
T N + + APEV + DV+S G++ + +++ PF P R
Sbjct: 160 HMT----NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
+++G+G G V+ ++ + + A K++ + + E+ +++Q + + +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
SY II E GGG L L E IA +R++L GLDY+H H +
Sbjct: 93 SYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
++L++ G + L DFG++ ++T
Sbjct: 152 AANVLLSEHG--EVKLADFGVAGQLT 175
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----KLGTL 1004
A + +L GL YLH H +I+ NV+++ +VKL D G ++T K T
Sbjct: 127 ATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTF 184
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
+ P + APEV+ + + D+WS G+ A L G P
Sbjct: 185 VG-----TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
E IA +R++L GLDY+H H + ++L++ G + L DFG++ ++T
Sbjct: 123 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLT 175
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
Length = 294
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV--TKLGTLIHPINTPN 1012
+LDG+++ H + H +I+P N+++ S +++ K+ D G + + T L H + T
Sbjct: 120 ILDGIKHAHDMRIVHRDIKPQNILIDSNKTL--KIFDFGIAKALSETSLTQTNHVLGTV- 176
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
++ +PE E TD++S G++ Y +L G PF G++
Sbjct: 177 -QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 7/174 (4%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMN 235
K I + Y D+LG G VY A + A K + + + F+ E+ +
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
QL H+N+V + D E D + ++ E G L + + ++ Q+L G+ +
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKH 126
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI--TSFGKLNPLEYDVRY 347
H + I H + P ++L+ + L + DFG+++ + TS + N + V+Y
Sbjct: 127 AHDMRIVHRDIKPQNILI--DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 484 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI--TSFGKLNPL 541
++ Q+L G+ + H + I H + P ++L+ + L + DFG+++ + TS + N +
Sbjct: 115 NFTNQILDGIKHAHDMRIVHRDIKPQNILI--DSNKTLKIFDFGIAKALSETSLTQTNHV 172
Query: 542 EYGNGQY 548
G QY
Sbjct: 173 -LGTVQY 178
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1180
+PE E TD++S G++ Y +L G PF G++
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
+GRG G+V A R+ ++ A K + + + F EL ++++ H N+V+L+ +
Sbjct: 16 VGRGAFGVVCKAKWRA--KDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGA-- 69
Query: 251 TKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL---SIAHL 304
+ ++ E A GG L LH YYT + Q G+ Y+H + ++ H
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L P +LL+ GG L + DFG + I +
Sbjct: 130 DLKPPNLLLV-AGGTVLKICDFGTACDIQT 158
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 464 GGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL---SIAHLGLTPGDLLVAHPG 517
GG L LH YYT + Q G+ Y+H + ++ H L P +LL+ G
Sbjct: 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV-AG 141
Query: 518 GRHLLLTDFGLSRRITS 534
G L + DFG + I +
Sbjct: 142 GTVLKICDFGTACDIQT 158
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 944 TTHKDAYCVTSVLDGLQYLHW---RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
H ++C+ G+ YLH + L H +++P N+++ + +V +K+ D G +
Sbjct: 101 AAHAMSWCLQCS-QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV-LKICDFGTACDIQT 158
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058
T N + + APEV + DV+S G++ + +++ PF P R
Sbjct: 159 HMT----NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 212
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + G N A K ++ + + EL ++ + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q + E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
L P +++V +L DFGL+R + + P
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTACTNFMMTP 184
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLA-RTACTNFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ D+WS G + L+ G F+G
Sbjct: 186 VVTR-YYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQG 227
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q + E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 523 LTDFGLSRRITSFGKLNP 540
DFGL+R + + P
Sbjct: 169 --DFGLARTACTNFMMTP 184
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYA-AKV-MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K+ + + S E+ ++ +L H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 69 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 154
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYA-AKV-MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+++G G G+VY A + +G A K+ + + S E+ ++ +L H N+V+L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
D T++ ++ E + L S T I Y+ QLL GL + H + H
Sbjct: 68 DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L P +LL+ G + L DFGL+R +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 153
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 168 YARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLF 227
Y +G +K P D Y+ +GRG G VY A ++++ +N A K + ++ L
Sbjct: 15 YFQGAIIKNVKVP--DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN---RMFEDLI 69
Query: 228 K-----NELDIMNQLCHRNLVRLHDSYETK-----DSFTIISELAGGGELLHSLTRQSYY 277
E+ I+N+L ++RLHD + D I+ E+A +L +
Sbjct: 70 DCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIA-DSDLKKLFKTPIFL 128
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
TE + + LL G ++H I H L P + L+ + + DFGL+R I S
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCS--VKICDFGLARTINS 183
Score = 30.0 bits (66), Expect = 9.7, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 476 YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ TE + + LL G ++H I H L P + L+ + + DFGL+R I S
Sbjct: 127 FLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCS--VKICDFGLARTINS 183
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
G+ LG+G G R +G K + + + F E+ +M L H N+++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 248 SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
I+E GG L + + S Y + + + SG+ Y+H ++I H L
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDL 134
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSR 330
+ LV +++++ DFGL+R
Sbjct: 135 NSHNCLVRE--NKNVVVADFGLAR 156
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
+ + + SG+ Y+H ++I H L + LV +++++ DFGL+R
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVRE--NKNVVVADFGLAR 156
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
L P +++V +L DFGL+R + + P E RY R
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMTP-EVVTRYYR 192
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
K++D G R ++ P + APEV+ D+WS G + ++ G
Sbjct: 166 KILDFGLA-RTAGTSFMMTP-EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 1048 PFRG 1051
F G
Sbjct: 224 LFPG 227
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
L P +++V +L DFGL+R + + P E RY R
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMEP-EVVTRYYR 192
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
K++D G R ++ P + APEV+ D+WS G + ++
Sbjct: 166 KILDFGLA-RTAGTSFMMEP-EVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 223
Query: 1048 PFRGQ 1052
F G+
Sbjct: 224 LFPGR 228
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinsae, Sky1p, Complexed With The Non-Hydrolyzable Atp
Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinsae, Sky1p, Complexed With The Non-Hydrolyzable Atp
Analogue, Amp-Pnp
Length = 373
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRS----VQVKLIDLGCTQRVTKLGTLIHPI 1008
+L GL Y+H R G+ H +I+P+NV+M V S +Q+K+ DLG + H
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE-----HYT 193
Query: 1009 NTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
N+ E+ +PEVL P D+WS L + L++G F
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRS----VQVKLIDLGCTQRVTKLGTLIHPI 1008
+L GL Y+H R G+ H +I+P+NV+M V S +Q+K+ DLG + H
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE-----HYT 193
Query: 1009 NTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
N+ E+ +PEVL P D+WS L + L++G F
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V L + DFGL+R TSF
Sbjct: 152 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 180
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS--DXTLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
+ APEV+ D+WS G +
Sbjct: 186 VVTR-YYRAPEVILGMGYKENVDIWSVGCI 214
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V L
Sbjct: 109 ELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVK--SDXTLK 166
Query: 523 LTDFGLSRRI-TSF 535
+ DFGL+R TSF
Sbjct: 167 ILDFGLARTAGTSF 180
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
L P +++V +L DFGL+R + + P E RY R
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMEP-EVVTRYYR 192
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
K++D G R ++ P + APEV+ D+WS G + ++
Sbjct: 166 KILDFGLA-RTAGTSFMMEP-EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI 223
Query: 1048 PFRGQ 1052
F G+
Sbjct: 224 LFPGR 228
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLV 243
++ + +G G G VY +G+ A KVM G++ + + K E++++ + HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI-KQEINMLKKYSHHRNIA 84
Query: 244 RLHDSYETK------DSFTIISELAGGGEL--LHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
+ ++ K D ++ E G G + L T+ + E IA+ R++L GL +
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 144
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+H+ + H + ++L+ + L DFG+S ++
Sbjct: 145 LHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQL 179
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-LGTLIHP 1007
AY +L GL +LH + H +I+ NV++ + +VKL+D G + ++ + +G
Sbjct: 132 AYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDRTVGRRNTF 189
Query: 1008 INTPNPEFAAPEVLA--EEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
I TP + APEV+A E P ++D+WS G+ A + GA P
Sbjct: 190 IGTPY--WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
Y + L+GL+YLH R + H +++ DNV+++S S + L D G C Q +L+
Sbjct: 168 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLT 226
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
P E APEV+ +P + D+WS+ + +L+G P FRG
Sbjct: 227 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 276
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 27/180 (15%)
Query: 157 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDE---------LGRGVTGIVYHAVERSS 207
EDNE G + + KP+ Y++ +E LGRG G V+ ++ +
Sbjct: 49 EDNE----------GVLLTEKLKPVD--YEYREEVHWMTHQPRLGRGSFGEVHRMKDKQT 96
Query: 208 GRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL 267
G A K + + + EL L +V L+ + I EL GG L
Sbjct: 97 GFQCAVKKV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 151
Query: 268 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
+ + E +Y+ Q L GL+Y+H I H + ++L++ G R L DFG
Sbjct: 152 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-AALCDFG 210
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L + + E +Y+ Q L GL+Y+H I H + ++L++ G R L
Sbjct: 148 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-AAL 206
Query: 524 TDFG 527
DFG
Sbjct: 207 CDFG 210
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
Y + L+GL+YLH R + H +++ DNV+++S S + L D G C Q +L+
Sbjct: 154 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLT 212
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
P E APEV+ +P + D+WS+ + +L+G P FRG
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 262
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 27/180 (15%)
Query: 157 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDEL---------GRGVTGIVYHAVERSS 207
EDNE G + + KP+ Y++ +E+ GRG G V+ ++ +
Sbjct: 35 EDNE----------GVLLTEKLKPVD--YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQT 82
Query: 208 GRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL 267
G A K + + + EL L +V L+ + I EL GG L
Sbjct: 83 GFQCAVKKV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137
Query: 268 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
+ + E +Y+ Q L GL+Y+H I H + ++L++ G R L DFG
Sbjct: 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-AALCDFG 196
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L + + E +Y+ Q L GL+Y+H I H + ++L++ G R L
Sbjct: 134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-AAL 192
Query: 524 TDFG 527
DFG
Sbjct: 193 CDFG 196
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
Y + L+GL+YLH R + H +++ DNV+++S S + L D G C Q +L+
Sbjct: 170 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLT 228
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
P E APEV+ +P + D+WS+ + +L+G P FRG
Sbjct: 229 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 278
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 27/180 (15%)
Query: 157 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDEL---------GRGVTGIVYHAVERSS 207
EDNE G + + KP+ Y++ +E+ GRG G V+ ++ +
Sbjct: 51 EDNE----------GVLLTEKLKPVD--YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQT 98
Query: 208 GRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL 267
G A K + + + EL L +V L+ + I EL GG L
Sbjct: 99 GFQCAVKKV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 153
Query: 268 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
+ + E +Y+ Q L GL+Y+H I H + ++L++ G R L DFG
Sbjct: 154 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-AALCDFG 212
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L + + E +Y+ Q L GL+Y+H I H + ++L++ G R L
Sbjct: 150 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-AAL 208
Query: 524 TDFG 527
DFG
Sbjct: 209 CDFG 212
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ D+WS G + ++ G F G
Sbjct: 186 VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium
Tuberculosis In Complex With Tetrahydrobenzothiophene
Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From Mycobacterium
Tuberculosis In Complex With Tetrahydrobenzothiophene
Ax20017
Length = 681
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
+P AY + +L L YLH GL + +++P+N+++ Q+KLIDLG R+
Sbjct: 179 LPVAEAIAYLL-EILPALSYLHSIGLVYNDLKPENIMLT---EEQLKLIDLGAVSRINSF 234
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAG 1036
G L P F APE++ P TD+++ G
Sbjct: 235 GYLYG-----TPGFQAPEIVRTGPTV-ATDIYTVG 263
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V L + DFGL+R TSF
Sbjct: 152 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 180
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DXTLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
+ APEV+ D+WS G +
Sbjct: 186 VVTR-YYRAPEVILGMGYKENVDIWSVGCI 214
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V L
Sbjct: 109 ELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDXTLK 166
Query: 523 LTDFGLSRRI-TSF 535
+ DFGL+R TSF
Sbjct: 167 ILDFGLARTAGTSF 180
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ D+WS G + ++ G F G
Sbjct: 186 VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V L + DFGL+R TSF
Sbjct: 152 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 180
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS--DXTLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
+ APEV+ D+WS G +
Sbjct: 186 VVTR-YYRAPEVILGMGYKENVDIWSVGCI 214
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V L
Sbjct: 109 ELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVK--SDXTLK 166
Query: 523 LTDFGLSRRI-TSF 535
+ DFGL+R TSF
Sbjct: 167 ILDFGLARTAGTSF 180
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ D+WS GV+ ++ G F G
Sbjct: 186 VVTR-YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG 227
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
+G G G VY KV+ Q+++ F+NE+ ++ + H N++ L Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA-FRNEVAVLRKTRHVNIL-LFMGYM 101
Query: 251 TKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
TKD+ I+++ G L L +++ + + + RQ G+DY+H +I H +
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSN 161
Query: 310 DLLVAHPGGRHLLLTDFGLS 329
++ + G + + DFGL+
Sbjct: 162 NIFLHE--GLTVKIGDFGLA 179
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 144
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V L + DFGL+R TSF
Sbjct: 145 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 173
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 122 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS--DXTLKILDFGLA-RTAGTSFMMTPY 178
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
+ APEV+ D+WS G +
Sbjct: 179 VVTR-YYRAPEVILGMGYKENVDIWSVGCI 207
Score = 33.9 bits (76), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V L
Sbjct: 102 ELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVK--SDXTLK 159
Query: 523 LTDFGLSRRI-TSF 535
+ DFGL+R TSF
Sbjct: 160 ILDFGLARTAGTSF 173
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 150
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 151 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 179
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 107 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 164
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 165 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 213
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 108 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 167
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 168 --DFGLARTAGTSF 179
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 166 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 214
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 153 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 181
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 109 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 166
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 167 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 215
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 110 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 170 --DFGLARTAGTSF 181
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 166 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 214
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 153 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 181
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 109 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 166
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 167 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 215
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 110 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 170 --DFGLARTAGTSF 181
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 146 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 174
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 102 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 159
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 160 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 208
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 103 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 162
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 163 --DFGLARTAGTSF 174
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
562
Length = 301
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI- 1008
Y + + G+QYLH + H +++ N+ + + VK+ D G ++ G +
Sbjct: 130 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLC 187
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
TPN + APEVL ++ + D+WS G + Y LL G PF ET
Sbjct: 188 GTPN--YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 234
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHR 240
Y G LG+G Y + + +A KV M K +Q K E+ I L +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ-KEKMSTEIAIHKSLDNP 86
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
++V H +E D ++ E+ LL R+ TE + +++RQ + G+ Y+H
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ H L G+L + + + DFGL+ +I
Sbjct: 147 VIHRDLKLGNLFLN--DDMDVKIGDFGLATKI 176
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL ++ + D+WS G + Y LL G PF ET + Y + +
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP---RHIN 250
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A+ + + P RP+V E
Sbjct: 251 PVASALIRRMLHADPTLRPSVAE 273
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +++RQ + G+ Y+H + H L G+L + + + DF
Sbjct: 113 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDF 170
Query: 527 GLSRRI 532
GL+ +I
Sbjct: 171 GLATKI 176
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 146 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 174
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 102 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 159
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 160 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 208
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 103 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 162
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 163 --DFGLARTAGTSF 174
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 144
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 145 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 173
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 101 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 158
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 159 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 207
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 102 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 161
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 162 --DFGLARTAGTSF 173
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ D+WS G + ++ G F G
Sbjct: 186 VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ D+WS GV+ ++ G F G
Sbjct: 186 VVTR-YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG 227
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y + +L G+++LH G+ H +++P N+V+ S +K++D G R ++ P
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ D+WS G + ++ G F G
Sbjct: 186 VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Score = 34.3 bits (77), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V L + DFGL+R TSF
Sbjct: 152 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 180
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DXTL 165
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 166 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 214
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V L
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDXTLK 166
Query: 523 LTDFGLSRRI-TSF 535
+ DFGL+R TSF
Sbjct: 167 ILDFGLARTAGTSF 180
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 190 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 218
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 146 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 203
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 204 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 252
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 147 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 207 --DFGLARTAGTSF 218
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G G V A+++ SG A K ++ + + EL ++ + H N++ L D
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSY---YTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
+ S + + + ++ ++E I + + Q+L GL Y+H + H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
L PG+L V L + DFGL+R
Sbjct: 152 LKPGNLAVNEDC--ELKILDFGLAR 174
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--LGTL 1004
K Y V +L GL+Y+H G+ H +++P N +A ++K++D G + G +
Sbjct: 127 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYV 184
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ + APEV+ + QT D+WS G + +L+G + F+G+
Sbjct: 185 V------TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
++E I + + Q+L GL Y+H + H L PG+L V L + DFGL+R
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC--ELKILDFGLAR 174
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + + ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 190 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 218
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 146 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 203
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVL 1038
K++D G R ++ P + APEV+ D+WS G +
Sbjct: 204 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCI 252
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 147 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 207 --DFGLARTAGTSF 218
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 146 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 174
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 102 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 159
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
K++D G R ++ P + APEV+ D+WS G + ++
Sbjct: 160 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 217
Query: 1048 PFRGQ 1052
F G+
Sbjct: 218 LFPGR 222
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 103 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 162
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 163 --DFGLARTAGTSF 174
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG----TLI 1005
Y + + G+QYLH + H +++ N+ + + VK+ D G ++ G TL
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKTLC 203
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
TPN + APEVL ++ + D+WS G + Y LL G PF ET
Sbjct: 204 ---GTPN--YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHR 240
Y G LG+G Y + + +A KV M K +Q K E+ I L +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ-KEKMSTEIAIHKSLDNP 102
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
++V H +E D ++ E+ LL R+ TE + +++RQ + G+ Y+H
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ H L G+L + + + DFGL+ +I
Sbjct: 163 VIHRDLKLGNLFLN--DDMDVKIGDFGLATKI 192
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL ++ + D+WS G + Y LL G PF ET + Y + +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP---RHIN 266
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A+ + + P RP+V E
Sbjct: 267 PVASALIRRMLHADPTLRPSVAE 289
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +++RQ + G+ Y+H + H L G+L + + + DF
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDF 186
Query: 527 GLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHT 568
GL+ +I G+ G Y + P + + + GH+
Sbjct: 187 GLATKIEFDGERKKTLCGTPNY---IAP-----EVLCKKGHS 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI- 1008
Y + + G+QYLH + H +++ N+ + + VK+ D G ++ G +
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKXLC 203
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
TPN + APEVL ++ + D+WS G + Y LL G PF ET
Sbjct: 204 GTPN--YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHR 240
Y G LG+G Y + + +A KV M K +Q K E+ I L +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ-KEKMSTEIAIHKSLDNP 102
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
++V H +E D ++ E+ LL R+ TE + +++RQ + G+ Y+H
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ H L G+L + + + DFGL+ +I
Sbjct: 163 VIHRDLKLGNLFLN--DDMDVKIGDFGLATKI 192
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL ++ + D+WS G + Y LL G PF ET + Y + +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP---RHIN 266
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A+ + + P RP+V E
Sbjct: 267 PVASALIRRMLHADPTLRPSVAE 289
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +++RQ + G+ Y+H + H L G+L + + + DF
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDF 186
Query: 527 GLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHT 568
GL+ +I G+ G Y + P + + + GH+
Sbjct: 187 GLATKIEFDGERKKXLCGTPNY---IAP-----EVLCKKGHS 220
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
K++D G R ++ P + APEV+ D+WS G + ++ G
Sbjct: 166 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 1048 PFRG 1051
F G
Sbjct: 224 LFPG 227
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G G V A+++ SG A K ++ + + EL ++ + H N++ L D
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSY---YTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
+ S + + + ++ ++E I + + Q+L GL Y+H + H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 169
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
L PG+L V L + DFGL+R
Sbjct: 170 LKPGNLAVNEDC--ELKILDFGLAR 192
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--L 1001
+ K Y V +L GL+Y+H G+ H +++P N +A ++K++D G +
Sbjct: 142 SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMT 199
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
G ++ + APEV+ + QT D+WS G + +L+G + F+G+
Sbjct: 200 GYVV------TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
++E I + + Q+L GL Y+H + H L PG+L V L + DFGL+R
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC--ELKILDFGLAR 192
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
094
Length = 317
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI- 1008
Y + + G+QYLH + H +++ N+ + + VK+ D G ++ G +
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLC 203
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
TPN + APEVL ++ + D+WS G + Y LL G PF ET
Sbjct: 204 GTPN--YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHR 240
Y G LG+G Y + + +A KV M K +Q K E+ I L +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ-KEKMSTEIAIHKSLDNP 102
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
++V H +E D ++ E+ LL R+ TE + +++RQ + G+ Y+H
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ H L G+L + + + DFGL+ +I
Sbjct: 163 VIHRDLKLGNLFLN--DDMDVKIGDFGLATKI 192
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL ++ + D+WS G + Y LL G PF ET + Y + +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP---RHIN 266
Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
A+ + + P RP+V E
Sbjct: 267 PVASALIRRMLHADPTLRPSVAE 289
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
LL R+ TE + +++RQ + G+ Y+H + H L G+L + + + DF
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN--DDMDVKIGDF 186
Query: 527 GLSRRI 532
GL+ +I
Sbjct: 187 GLATKI 192
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
K++D G R ++ P + APEV+ D+WS G + ++ G
Sbjct: 166 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 1048 PFRG 1051
F G
Sbjct: 224 LFPG 227
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 169 --DFGLARTAGTSF 180
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 94 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 153
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 154 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 182
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 110 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 167
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
K++D G R ++ P + APEV+ D+WS G + ++ G
Sbjct: 168 KILDFGLA-RTAGTSFMMVPFVVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 225
Query: 1048 PFRG 1051
F G
Sbjct: 226 LFPG 229
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 111 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 170
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 171 --DFGLARTAGTSF 182
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 156
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 157 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 185
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 113 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 170
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
K++D G R ++ P + APEV+ D+WS G + ++
Sbjct: 171 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 228
Query: 1048 PFRGQ 1052
F G+
Sbjct: 229 LFPGR 233
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 114 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 173
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 174 --DFGLARTAGTSF 185
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 927 WFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLH-WRGLCHLNIEPDNVVMASVRSV 985
+F L + C++PI + + SVL+ Y+H + +CH +++P N++M ++
Sbjct: 137 FFVLDKNYTCFIPIQVIKC-----IIKSVLNSFSYIHNEKNICHRDVKPSNILMD--KNG 189
Query: 986 QVKLIDLGCTQRVT------KLGTLIHPINTPNPEFAAPEVLAEEPIF--PQTDVWSAGV 1037
+VKL D G ++ + GT EF PE + E + + D+WS G+
Sbjct: 190 RVKLSDFGESEYMVDKKIKGSRGTY---------EFMPPEFFSNESSYNGAKVDIWSLGI 240
Query: 1038 LAYVLLSGASPF 1049
YV+ PF
Sbjct: 241 CLYVMFYNVVPF 252
Score = 36.2 bits (82), Expect = 0.14, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 31/141 (21%)
Query: 1145 PEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQ-SEPE-----TRQNVNFVRYRFE 1196
PE + E + + D+WS G+ YV+ PF + S E +N+ + R
Sbjct: 219 PEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNH 278
Query: 1197 YLF-----------KELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRER 1245
+L+ L+ E FL L ++ P +R T E+ ++ WL +
Sbjct: 279 FLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI------- 331
Query: 1246 AVFLGNRLKEFSDEYHDLKNK 1266
L+EFS E + + K
Sbjct: 332 -----EDLREFSKELYKKRKK 347
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
+G G GIV A + RN A K ++ + + EL +M + H+N++ L +
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
+ + S ++ EL+ + Q E D +++ + Q+L G+ ++H I H
Sbjct: 93 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
L P +++V +L DFGL+R TSF
Sbjct: 153 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 181
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928 FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
+L + LC + + + +Y + +L G+++LH G+ H +++P N+V+ S +
Sbjct: 109 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 166
Query: 988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
K++D G R ++ P + APEV+ D+WS G + ++ G
Sbjct: 167 KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 224
Query: 1048 PFRG 1051
F G
Sbjct: 225 LFPG 228
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 466 ELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
EL+ + Q E D +++ + Q+L G+ ++H I H L P +++V +L
Sbjct: 110 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
Query: 523 LTDFGLSRRI-TSF 535
DFGL+R TSF
Sbjct: 170 --DFGLARTAGTSF 181
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------C 238
+++G G G V+ V+R G YA K + K +D N L
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLD 294
H ++VR ++ D I +E GG L +++ SY+ E ++ + Q+ GL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 295 YMHRLSIAHLGLTPGDLLVA 314
Y+H +S+ H+ + P ++ ++
Sbjct: 128 YIHSMSLVHMDIKPSNIFIS 147
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMA-----SVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
GL+Y+H L H++I+P N+ ++ + S + D + + K+G L H +
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 184
Query: 1013 PE-------FAAPEVLAEEPI-FPQTDVWSAGVLAYVLLSGASPF--RGQSEPETRQNVN 1062
P+ F A EVL E P+ D++ A L V +GA P G E RQ
Sbjct: 185 PQVEEGDSRFLANEVLQENYTHLPKADIF-ALALTVVCAAGAEPLPRNGDQWHEIRQG-- 241
Query: 1063 FVRYRFEYLFKELTQEATRFLMLIF 1087
R + + L+QE T L ++
Sbjct: 242 ----RLPRIPQVLSQEFTELLKVMI 262
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 464 GGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA 514
GG L +++ SY+ E ++ + Q+ GL Y+H +S+ H+ + P ++ ++
Sbjct: 93 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 147
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------C 238
+++G G G V+ V+R G YA K + K +D N L
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLD 294
H ++VR ++ D I +E GG L +++ SY+ E ++ + Q+ GL
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 295 YMHRLSIAHLGLTPGDLLVA 314
Y+H +S+ H+ + P ++ ++
Sbjct: 126 YIHSMSLVHMDIKPSNIFIS 145
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMA-----SVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
GL+Y+H L H++I+P N+ ++ + S + D + + K+G L H +
Sbjct: 123 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 182
Query: 1013 PE-------FAAPEVLAEEPI-FPQTDVWSAGVLAYVLLSGASPF--RGQSEPETRQNVN 1062
P+ F A EVL E P+ D++ A L V +GA P G E RQ
Sbjct: 183 PQVEEGDSRFLANEVLQENYTHLPKADIF-ALALTVVXAAGAEPLPRNGDQWHEIRQG-- 239
Query: 1063 FVRYRFEYLFKELTQEATRFLMLIF 1087
R + + L+QE T L ++
Sbjct: 240 ----RLPRIPQVLSQEFTELLKVMI 260
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 464 GGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA 514
GG L +++ SY+ E ++ + Q+ GL Y+H +S+ H+ + P ++ ++
Sbjct: 91 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 145
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943 PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
P T K A + L + H G+ H +++P N+++++ +V K++D G + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAV--KVVDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + ++ +PE + + ++DV+S G + Y +L+G PF G S
Sbjct: 170 GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 9/163 (5%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQL 237
++D Y+ G+ LG G V+ A + R+ A KV+ + S F+ E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 238 CHRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
H +V ++D+ E + I+ E G L + + T I L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
++ H+ I H + P ++L++ + + DFG++R I G
Sbjct: 130 NFSHQNGIIHRDVKPANILIS--ATNAVKVVDFGIARAIADSG 170
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------C 238
+++G G G V+ V+R G YA K + K +D N L
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLD 294
H ++VR ++ D I +E GG L +++ SY+ E ++ + Q+ GL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 295 YMHRLSIAHLGLTPGDLLVA 314
Y+H +S+ H+ + P ++ ++
Sbjct: 128 YIHSMSLVHMDIKPSNIFIS 147
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMA-----SVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
GL+Y+H L H++I+P N+ ++ + S + D + + K+G L H +
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 184
Query: 1013 PE-------FAAPEVLAEEPI-FPQTDVWSAGVLAYVLLSGASPF--RGQSEPETRQNVN 1062
P+ F A EVL E P+ D++ A L V +GA P G E RQ
Sbjct: 185 PQVEEGDSRFLANEVLQENYTHLPKADIF-ALALTVVCAAGAEPLPRNGDQWHEIRQG-- 241
Query: 1063 FVRYRFEYLFKELTQEATRFLMLIF 1087
R + + L+QE T L ++
Sbjct: 242 ----RLPRIPQVLSQEFTELLKVMI 262
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 464 GGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA 514
GG L +++ SY+ E ++ + Q+ GL Y+H +S+ H+ + P ++ ++
Sbjct: 93 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 147
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------C 238
+++G G G V+ V+R G YA K + K +D N L
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLD 294
H ++VR ++ D I +E GG L +++ SY+ E ++ + Q+ GL
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 295 YMHRLSIAHLGLTPGDLLVA 314
Y+H +S+ H+ + P ++ ++
Sbjct: 130 YIHSMSLVHMDIKPSNIFIS 149
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMA-----SVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
GL+Y+H L H++I+P N+ ++ + S + D + + K+G L H +
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186
Query: 1013 PE-------FAAPEVLAEEPI-FPQTDVWSAGVLAYVLLSGASPF--RGQSEPETRQNVN 1062
P+ F A EVL E P+ D++ A L V +GA P G E RQ
Sbjct: 187 PQVEEGDSRFLANEVLQENYTHLPKADIF-ALALTVVCAAGAEPLPRNGDQWHEIRQG-- 243
Query: 1063 FVRYRFEYLFKELTQEATRFLMLIF 1087
R + + L+QE T L ++
Sbjct: 244 ----RLPRIPQVLSQEFTELLKVMI 264
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 464 GGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA 514
GG L +++ SY+ E ++ + Q+ GL Y+H +S+ H+ + P ++ ++
Sbjct: 95 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 149
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E +++ L G L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGAD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 169 DLKPSNLLLN--TTXDLKICDFGLAR 192
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 447 RGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 506
R P ++ +D G L+ L + + + I +++ Q+L GL Y+H ++ H L
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 170
Query: 507 TPGDLLVAHPGGRHLLLTDFGLSR 530
P +LL+ L + DFGL+R
Sbjct: 171 KPSNLLLN--TTXDLKICDFGLAR 192
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFL 204
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 205 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 251
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT-EFDNLRSLRHERI 655
+Y +S I G + +V A + N + K+ + H T Q E L RHE I
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRH 692
+ + + T V ++ L GAD+ L ++H
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH 140
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 17 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 72
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI---RQLLSGLDYMHRLSIA 302
Y TK I+++ G L H L + T++++ I RQ G+DY+H SI
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKSII 130
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 131 HRDLKSNNIFLHEDNT--VKIGDFGLA 155
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN-ELDIMNQLCHRNL 242
AY +G G G+V+ A S KV+ K FKN EL IM + H N+
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNV 94
Query: 243 VRLHDSY----ETKDSFTIISELAGGGELLHSLTRQSYYTEYD-------IAHYIRQLLS 291
V L + + KD + L E ++ +R +Y + I Y+ QLL
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASR--HYAKLKQTMPMLLIKLYMYQLLR 152
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
L Y+H + I H + P +LL+ P G L L DFG S +I G+ N RY R
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGV-LKLIDFG-SAKILIAGEPNVSXICSRYYR 208
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L L Y+H G+CH +I+P N+++ V +KLID G + + + I +
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGV-LKLIDFGSAKILIAGEPNVSXICS--RY 206
Query: 1015 FAAPEVLAEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
+ APE+ IF T D+WS G + L+ G F G+S
Sbjct: 207 YRAPEL-----IFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 539
I Y+ QLL L Y+H + I H + P +LL+ P G L L DFG S +I G+ N
Sbjct: 143 IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGV-LKLIDFG-SAKILIAGEPN 198
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLC 238
+ + Y+ ++G G G+V+ R +G+ A K + K + E+ ++ QL
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMH 297
H NLV L + + K ++ E +LH L R Q E+ + Q L +++ H
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYC-DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 298 RLSIAHLGLTPGDLLVAHPGGRH--LLLTDFGLSRRITS 334
+ + H + P ++L+ +H + L DFG +R +T
Sbjct: 120 KHNCIHRDVKPENILIT----KHSVIKLCDFGFARLLTG 154
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L + + H H +++P+N+++ + +KL D G + +T P + + E
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILIT--KHSVIKLCDFGFARLLTG------PSDYYDDEV 163
Query: 1016 A-----APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
A +PE+L + + P DVW+ G + LLSG + G+S+
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD 208
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD--TLHQVNT-EFDNLRSLRH 652
+KY+ I +I G + VV K + +T +VA K F S D + ++ E L+ L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNR-DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 653 ERIASLLEAYK 663
+ +LLE ++
Sbjct: 62 PNLVNLLEVFR 72
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 29 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 84
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI---RQLLSGLDYMHRLSIA 302
Y TK I+++ G L H L + T++++ I RQ G+DY+H SI
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 143 HRDLKSNNIFLHED--NTVKIGDFGLA 167
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP
DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943 PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
P T K A + L + H G+ H +++P N+++++ +V K++D G + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + ++ +PE + + ++DV+S G + Y +L+G PF G S
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 9/163 (5%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQL 237
++D Y+ G+ LG G V+ A + R+ A KV+ + S F+ E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 238 CHRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
H +V ++D+ E + I+ E G L + + T I L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
++ H+ I H + P +++++ ++ DFG++R I G
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVM--DFGIARAIADSG 170
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG---KGNQYKSLFKNELDIMNQLC-HR 240
Y+ +LG+G GIV+ +++R +G A K + + F+ E+ I+ +L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHE 69
Query: 241 NLVRLHDSYET---KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
N+V L + +D + + + LH++ R + + + QL+ + Y+H
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETD---LHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
+ H + P ++L+ H+ + DFGLSR + ++
Sbjct: 127 SGGLLHRDMKPSNILLN--AECHVKVADFGLSRSFVNIRRV 165
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 24/134 (17%)
Query: 941 VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
++ HK Y V ++ ++YLH GL H +++P N+++ + VK+ D G ++
Sbjct: 105 ILEPVHK-QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA--ECHVKVADFGLSRSFVN 161
Query: 1001 LGTLIHPI------NTPNPE--------------FAAPEVLAEEPIFPQ-TDVWSAGVLA 1039
+ + + I NT N + + APE+L + + D+WS G +
Sbjct: 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCIL 221
Query: 1040 YVLLSGASPFRGQS 1053
+L G F G S
Sbjct: 222 GEILCGKPIFPGSS 235
Score = 34.3 bits (77), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
LH++ R + + + QL+ + Y+H + H + P ++L+ H+ + DFG
Sbjct: 97 LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN--AECHVKVADFG 154
Query: 528 LSRRITSFGKL 538
LSR + ++
Sbjct: 155 LSRSFVNIRRV 165
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRN 241
D Y +LGRG V+ A+ ++ K++ K+ K E+ I+ L N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KNKIKREIKILENLRGGPN 93
Query: 242 LVRLHDSYETKDSFT--IISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSGLDYMH 297
++ L D + S T ++ E + +Q Y T+YDI Y+ ++L LDY H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H + P ++++ H R L L D+GL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 587 IEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDN 646
+EW + D YQ + ++ RGK+S V +A N E +V L + + + +N
Sbjct: 31 VEWGNQ---DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILEN 87
Query: 647 LRS 649
LR
Sbjct: 88 LRG 90
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943 PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
P T K A + L + H G+ H +++P N+++++ +V K++D G + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + ++ +PE + + ++DV+S G + Y +L+G PF G S
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 9/163 (5%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQL 237
++D Y+ G+ LG G V+ A + R+ A KV+ + S F+ E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 238 CHRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
H +V ++D+ E + I+ E G L + + T I L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
++ H+ I H + P +++++ ++ DFG++R I G
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVM--DFGIARAIADSG 170
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943 PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
P T K A + L + H G+ H +++P N+++++ +V K++D G + +
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 186
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + ++ +PE + + ++DV+S G + Y +L+G PF G S
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 240
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 10/175 (5%)
Query: 170 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--- 226
RG + T + ++D Y+ G+ LG G V+ A + R+ A KV+ + S
Sbjct: 17 RGSHMTTPSH-LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR 75
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDI 282
F+ E L H +V ++D+ E + I+ E G L + + T
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 135
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
I L++ H+ I H + P +++++ ++ DFG++R I G
Sbjct: 136 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM--DFGIARAIADSGN 188
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb
Length = 311
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943 PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
P T K A + L + H G+ H +++P N+++++ +V K++D G + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + ++ +PE + + ++DV+S G + Y +L+G PF G S
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 9/163 (5%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQL 237
++D Y+ G+ LG G V+ A + R+ A KV+ + S F+ E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 238 CHRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
H +V ++D+ E + I+ E G L + + T I L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
++ H+ I H + P +++++ ++ DFG++R I G
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVM--DFGIARAIADSG 170
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943 PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
P T K A + L + H G+ H +++P N+++++ +V K++D G + +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
G + ++ +PE + + ++DV+S G + Y +L+G PF G S
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 9/163 (5%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQL 237
++D Y+ G+ LG G V+ A + R+ A KV+ + S F+ E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 238 CHRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
H +V ++ + E + I+ E G L + + T I L
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
++ H+ I H + P +++++ ++ DFG++R I G
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVM--DFGIARAIADSG 170
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNE--DXELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 37.0 bits (84), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 150 DIIHRDLKPSNLAVNE--DXELKILDFGLAR 178
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGY---- 187
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKIL 172
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 173 DFGLAR 178
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 13 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 68
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y TK I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 125
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 126 IHRDLKSNNIFLHE--DLTVKIGDFGLA 151
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + + T+ + I Q+L GL Y+H
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 141 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 169
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 178
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 239 GAELLKKISSESAR 252
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 106 GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 163
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 164 DFGLAR 169
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 33 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 88
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y TK I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 145
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 146 IHRDLKSNNIFLHE--DLTVKIGDFGLA 171
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-TKLGTLIHPI 1008
+ + +L GL+Y+H + H +++P N +A ++K++D G + ++ +
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFV--- 183
Query: 1009 NTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 15 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 70
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y TK I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 127
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 128 IHRDLKSNNIFLHE--DLTVKIGDFGLA 153
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 40 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 95
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y TK I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 152
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 153 IHRDLKSNNIFLHED--LTVKIGDFGLA 178
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 13 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 68
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y TK I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 125
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 126 IHRDLKSNNIFLHE--DLTVKIGDFGLA 151
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL R
Sbjct: 145 DIIHRDLKPSNLAVNEDS--ELKILDFGLCR 173
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPI 1008
+ + +L GL+Y+H + H +++P N +A ++K++D G C ++ +
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDSELKILDFGLCRHTDDEMTGYV--- 183
Query: 1009 NTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS--ELKIL 167
Query: 525 DFGLSR 530
DFGL R
Sbjct: 168 DFGLCR 173
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 18 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 73
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y TK I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 130
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 131 IHRDLKSNNIFLHE--DLTVKIGDFGLA 156
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-TKLGTLIHPI 1008
+ + +L GL+Y+H + H +++P N +A ++K++D G + ++ +
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFV--- 183
Query: 1009 NTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 96
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 154
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 155 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 183
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 139 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 192
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 235
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 120 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 177
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 178 DFGLAR 183
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
++LG G G+V + SG+ + V K + Q +++ F E++ M+ L HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+RL+ T +++ELA G LL L + Q ++ ++ Y Q+ G+ Y+
Sbjct: 78 IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
H L +LL+A R L+ + DFGL R +
Sbjct: 137 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 165
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
E+G G G VY A + + A K M+ G Q +++ E+ + +L H N ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 247 DSYETKDSFTIISE--LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
Y + + ++ E L +LL + E +IA L GL Y+H ++ H
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG---------------KLNPLEYDVRYVR 349
+ G++L++ PG + L DFG + + ++ +YD +
Sbjct: 179 DVKAGNILLSEPG--LVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDV 236
Query: 350 QALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD 385
+L + A+RKP P N +A+ Y++ ++
Sbjct: 237 WSLGITCIELAERKP----PLFNMNAMSALYHIAQN 268
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
E +IA L GL Y+H ++ H + G++L++ PG + L DFG
Sbjct: 153 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKLGDFG 199
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
E+G G G VY A + + A K M+ G Q +++ E+ + +L H N ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 247 DSYETKDSFTIISE--LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
Y + + ++ E L +LL + E +IA L GL Y+H ++ H
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG---------------KLNPLEYDVRYVR 349
+ G++L++ PG + L DFG + + ++ +YD +
Sbjct: 140 DVKAGNILLSEPG--LVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDV 197
Query: 350 QALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD 385
+L + A+RKP P N +A+ Y++ ++
Sbjct: 198 WSLGITCIELAERKP----PLFNMNAMSALYHIAQN 229
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
E +IA L GL Y+H ++ H + G++L++ PG + L DFG
Sbjct: 114 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKLGDFG 160
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 18 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 73
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y TK I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 130
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 131 IHRDLKSNNIFLHE--DLTVKIGDFGLA 156
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 41 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 96
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y TK I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 153
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 154 IHRDLKSNNIFLHED--LTVKIGDFGLA 179
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 150 DIIHRDLKPSNLAVNE--DXELKILDFGLAR 178
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGY---- 187
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKIL 172
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 173 DFGLAR 178
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 41 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 96
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y TK I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 153
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 154 IHRDLKSNNIFLHED--LTVKIGDFGLA 179
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 147 DIIHRDLKPSNLAVNEDS--ELKILDFGLAR 175
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGY---- 184
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS--ELKIL 169
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 170 DFGLAR 175
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
++LG G G+V + SG+ + V K + Q +++ F E++ M+ L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+RL+ T +++ELA G LL L + Q ++ ++ Y Q+ G+ Y+
Sbjct: 74 IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
H L +LL+A R L+ + DFGL R +
Sbjct: 133 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 161
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
++LG G G+V + SG+ + V K + Q +++ F E++ M+ L HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+RL+ T +++ELA G LL L + Q ++ ++ Y Q+ G+ Y+
Sbjct: 84 IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
H L +LL+A R L+ + DFGL R +
Sbjct: 143 IHRDLAARNLLLAT---RDLVKIGDFGLMRAL 171
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ GL++LH R + + +++P+NV++ +V++ DLG + K G
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--DLGLAVEL-KAGQTKTKGY 349
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
P F APE+L E D ++ GV Y +++ PFR + E
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLHD 247
LGRG G V+ +++G+ YA K + K + + ++ E I+ ++ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 248 SYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
++ETK ++ + GG++ + + + E Y Q++SGL+++H+ +I +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L P ++L+ G ++ ++D GL+ + +
Sbjct: 313 RDLKPENVLLDDDG--NVRISDLGLAVELKA 341
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 141 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 169
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-TKLGTLIHPI 1008
+ + +L GL+Y+H + H +++P N +A ++K++D G + ++ +
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFV--- 179
Query: 1009 NTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRY 1066
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 180 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 1067 RFEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 238 PGAELLKKISSESAR 252
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 163
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 164 DFGLAR 169
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ GL++LH R + + +++P+NV++ +V++ DLG + K G
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--DLGLAVEL-KAGQTKTKGY 349
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
P F APE+L E D ++ GV Y +++ PFR + E
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLHD 247
LGRG G V+ +++G+ YA K + K + + ++ E I+ ++ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 248 SYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
++ETK ++ + GG++ + + + E Y Q++SGL+++H+ +I +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L P ++L+ G ++ ++D GL+ + +
Sbjct: 313 RDLKPENVLLDDDG--NVRISDLGLAVELKA 341
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 141 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 169
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 178
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 239 GAELLKKISSESAR 252
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 163
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 164 DFGLAR 169
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 150 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 178
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 187
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 172
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 173 DFGLAR 178
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLS---KPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 157 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 185
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 194
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 122 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 179
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 180 DFGLAR 185
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 85
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 86 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 143
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 144 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 172
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 128 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 181
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 224
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 109 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 166
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 167 DFGLAR 172
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G+++GRG G V+ R+ A K K+ F E I+ Q H N+VRL
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
K I+ EL GG+ L L T + + + +G++Y+ H
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L + LV L ++DFG+SR
Sbjct: 238 DLAARNCLVTEKN--VLKISDFGMSR 261
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYL 1198
K APE L ++DVWS G+L + S GASP+ S +TR+ FV
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE---FVEKGGRLP 335
Query: 1199 FKELTQEAT-RFLMLIFKRAPGKRPT 1223
EL +A R + + PG+RP+
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPS 361
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT-QRVTKLGTLIHPINTPNPEFA 1016
G++YL + H ++ N ++ ++V +K+ D G + + + + ++
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTE-KNV-LKISDFGMSREEADGVXAASGGLRQVPVKWT 282
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE L ++DVWS G+L + S GASP+ S +TR+ V
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ GL++LH R + + +++P+NV++ +V++ DLG + K G
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--DLGLAVEL-KAGQTKTKGY 349
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
P F APE+L E D ++ GV Y +++ PFR + E
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLHD 247
LGRG G V+ +++G+ YA K + K + + ++ E I+ ++ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 248 SYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
++ETK ++ + GG++ + + + E Y Q++SGL+++H+ +I +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L P ++L+ G ++ ++D GL+ + +
Sbjct: 313 RDLKPENVLLDDDG--NVRISDLGLAVELKA 341
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 163
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 164 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 192
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 201
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 262 GAELLKKISSESAR 275
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 129 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 186
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 187 DFGLAR 192
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
++LG G G+V + SG+ + V K + Q +++ F E++ M+ L HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+RL+ T +++ELA G LL L + Q ++ ++ Y Q+ G+ Y+
Sbjct: 84 IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
H L +LL+A R L+ + DFGL R +
Sbjct: 143 IHRDLAARNLLLAT---RDLVKIGDFGLMRAL 171
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 151 DIIHRDLKPSNLAVNEDS--ELKILDFGLAR 179
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGY---- 188
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS--ELKIL 173
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 174 DFGLAR 179
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
++LG G G+V + SG+ + V K + Q +++ F E++ M+ L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+RL+ T +++ELA G LL L + Q ++ ++ Y Q+ G+ Y+
Sbjct: 74 IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
H L +LL+A R L+ + DFGL R +
Sbjct: 133 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 161
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G+++GRG G V+ R+ A K K+ F E I+ Q H N+VRL
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
K I+ EL GG+ L L T + + + +G++Y+ H
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L + LV L ++DFG+SR
Sbjct: 238 DLAARNCLVTEKN--VLKISDFGMSR 261
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYL 1198
K APE L ++DVWS G+L + S GASP+ S +TR+ FV
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE---FVEKGGRLP 335
Query: 1199 FKELTQEAT-RFLMLIFKRAPGKRPT 1223
EL +A R + + PG+RP+
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPS 361
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ APE L ++DVWS G+L + S GASP+ S +TR+ V
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 165 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 193
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 202
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 263 GAELLKKISSESAR 276
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 130 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 187
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 188 DFGLAR 193
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 152 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 180
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 189
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 174
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 175 DFGLAR 180
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 155
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 156 DIIHRDLKPSNLAVNE--DXELKILDFGLAR 184
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGY---- 193
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 121 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKIL 178
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 179 DFGLAR 184
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 147 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 175
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 184
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 169
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 170 DFGLAR 175
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 152 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 180
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGY---- 189
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 174
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 175 DFGLAR 180
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 152 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 180
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGY---- 189
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 174
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 175 DFGLAR 180
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 141
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 142 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 170
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 107 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 164
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 165 DFGLAR 170
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 165 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 193
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + + +
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDD--EMXGXVA 204
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
T + APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 205 T--RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 263 GAELLKKISSESAR 276
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 130 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 187
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 188 DFGLAR 193
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 149 DLKPSNLLLN--TTXDLKICDFGLAR 172
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKICDFG 169
Query: 528 LSR 530
L+R
Sbjct: 170 LAR 172
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFL 184
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 185 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 151 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 179
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 188
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 173
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 174 DFGLAR 179
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 149 DLKPSNLLLNTTCD--LKICDFGLAR 172
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 169
Query: 528 LSR 530
L+R
Sbjct: 170 LAR 172
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 184
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 185 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY---KSLFKNELDIMNQL 237
I D Y+ +G G G V A ++ R A K + K + + E+ I+N+L
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRL 109
Query: 238 CHRNLVRLHD-----SYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLS 291
H ++V++ D E D ++ E+A L R Y TE I + LL
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLLV 167
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
G+ Y+H I H L P + LV + + DFGL+R +
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCS--VKVCDFGLARTV 206
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 476 YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 535
Y TE I + LL G+ Y+H I H L P + LV + + DFGL+R +
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCS--VKVCDFGLARTV--- 206
Query: 536 GKLNPLEYG-NGQYKVAVTPAMKHLQAIT 563
+Y NG ++ ++P + +T
Sbjct: 207 ------DYPENGNSQLPISPREDDMNLVT 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 152 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 180
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGY---- 189
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 174
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 175 DFGLAR 180
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 153 DLKPSNLLLN--TTXDLKICDFGLAR 176
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKICDFG 173
Query: 528 LSR 530
L+R
Sbjct: 174 LAR 176
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFL 188
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 189 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 141 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 169
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 178
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 163
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 164 DFGLAR 169
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 149 DLKPSNLLLN--TTXDLKICDFGLAR 172
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKICDFG 169
Query: 528 LSR 530
L+R
Sbjct: 170 LAR 172
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFL 184
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 185 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 141
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 142 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 170
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 240 GAELLKKISSESAR 253
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 107 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 164
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 165 DFGLAR 170
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+Y ++ + YL + + H +I+ +N+V+A +KLID G + + G L +
Sbjct: 133 SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA--EDFTIKLIDFGSAAYLER-GKLFYTF 189
Query: 1009 NTPNPEFAAPEVLAEEPI-FPQTDVWSAGVLAYVLLSGASPF 1049
E+ APEVL P P+ ++WS GV Y L+ +PF
Sbjct: 190 -CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN--------ELDIMNQLCHRNL 242
LG G G V+ AV++ + K + + ++ E+ I++++ H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI-RQLLSGLDYMHRLSI 301
+++ D +E + F ++ E G G L + + + +A YI RQL+S + Y+ I
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDI 151
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFG 327
H + ++++A + L DFG
Sbjct: 152 IHRDIKDENIVIAE--DFTIKLIDFG 175
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 147 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 175
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 184
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 169
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 170 DFGLAR 175
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMT----GX 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 243 GAELLKKISSESAR 256
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLHD 247
LGRG G V+ +++G+ YA K + K + + ++ E I+ ++ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 248 SYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
++ETK ++ + GG++ + + + E Y Q++SGL+++H+ +I +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L P ++L+ G ++ ++D GL+ + +
Sbjct: 313 RDLKPENVLLDDDG--NVRISDLGLAVELKA 341
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ ++ GL++LH R + + +++P+NV++ +V++ DLG + K G
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--DLGLAVEL-KAGQTKTKGY 349
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
P F APE+L E D ++ GV Y +++ PFR + E
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
++LG G G+V + SG+ + V K + Q +++ F E++ M+ L HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+RL+ T +++ELA G LL L + Q ++ ++ Y Q+ G+ Y+
Sbjct: 74 IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
H L +LL+A R L+ + DFGL R +
Sbjct: 133 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 161
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 147 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 175
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 184
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 169
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 170 DFGLAR 175
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 168 DFGLAR 173
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 167
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 168 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 196
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + + +
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDD--EMXGYVA 207
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
T + APE++ + QT D+WS G + LL+G + F G
Sbjct: 208 T--RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 133 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 190
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 191 DFGLAR 196
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 84
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 85 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 142
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 143 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 171
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 127 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 240
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 241 GAELLKKISSESAR 254
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 108 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 165
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 166 DFGLAR 171
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 157 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 185
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 194
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 122 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 179
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 180 DFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 157 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 185
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 194
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 122 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 179
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 180 DFGLAR 185
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 151 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 179
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 188
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 173
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 174 DFGLAR 179
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V + + SG A K ++ ++S+ EL ++ + H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 115
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 116 LDVFTPATSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 173
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 174 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 202
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 158 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 211
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
+ APE++ + T D+WS G + LL+G + F G Q +
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQI 264
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT--EFDNLRSLRHE 653
++YQ +S + G + V + + + + KL +H T E L+ ++HE
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 654 RIASLLEAYKPSTTASNIA-VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ LL+ + P+T+ V ++ L GAD L+ + + T+ +V +I Q
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQ 162
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 139 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 196
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 197 DFGLAR 202
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 155
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 156 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 184
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 193
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 121 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 178
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 179 DFGLAR 184
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 163
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 164 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 192
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 201
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 262 GAELLKKISSESAR 275
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 129 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 186
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 187 DFGLAR 192
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
++LG G G+V + SG+ + V K + Q +++ F E++ M+ L HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+RL+ T +++ELA G LL L + Q ++ ++ Y Q+ G+ Y+
Sbjct: 78 IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
H L +LL+A R L+ + DFGL R +
Sbjct: 137 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 165
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 29 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 84
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI---RQLLSGLDYMHRLSIA 302
Y T I+++ G L H L + T++++ I RQ G+DY+H SI
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 143 HRDLKSNNIFLHED--NTVKIGDFGLA 167
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 165 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 193
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 202
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 263 GAELLKKISSESAR 276
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 130 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 187
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 188 DFGLAR 193
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 150 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 178
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 187
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 172
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 173 DFGLAR 178
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 151 DLKPSNLLLNTTCD--LKICDFGLAR 174
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 186
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 187 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 233
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 171
Query: 528 LSR 530
L+R
Sbjct: 172 LAR 174
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 167
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 168 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 196
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 205
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE-PETRQNVNFVRYR 1067
+ APE++ + QT D+WS G + LL+G + F G + + + V
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 1068 FEYLFKELTQEATR 1081
L K+++ E+ R
Sbjct: 266 GAELLKKISSESAR 279
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 133 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 190
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 191 DFGLAR 196
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLC-- 238
Y+ E+G G G V+ A + +G + A +V TG+ S + E+ ++ L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 71
Query: 239 -HRNLVRLHD-------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
H N+VRL D ETK + L + TE I + QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLL 130
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
GLD++H + H L P ++LV G + L DFGL+ RI SF
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA-RIYSF 172
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 942 IPT-THKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
+PT T KD + +L GL +LH + H +++P N+++ S S Q+KL D G + +
Sbjct: 117 VPTETIKDM--MFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSF 172
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
L + T + APEVL + D+WS G + + FRG S+
Sbjct: 173 QMALTSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
D+ T+ D VP G E + + + QLL GLD++H + H L P
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDM--------------MFQLLRGLDFLHSHRVVHRDLKPQ 149
Query: 510 DLLVAHPGGRHLLLTDFGLSRRITSF 535
++LV G + L DFGL+ RI SF
Sbjct: 150 NILVTSSG--QIKLADFGLA-RIYSF 172
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 27/191 (14%)
Query: 146 GTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDE---------LGRGVT 196
G+ S + EDNE G + + KP+ Y++ +E LGRG
Sbjct: 40 GSRSREPSPKTEDNE----------GVLLTEKLKPVD--YEYREEVHWATHQLRLGRGSF 87
Query: 197 GIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT 256
G V+ ++ +G A K + + + EL L +V L+ +
Sbjct: 88 GEVHRMEDKQTGFQCAVKKV-----RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVN 142
Query: 257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 316
I EL GG L + Q E +Y+ Q L GL+Y+H I H G D ++
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH-GDVKADNVLLSS 201
Query: 317 GGRHLLLTDFG 327
G H L DFG
Sbjct: 202 DGSHAALCDFG 212
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
Y + L+GL+YLH R + H +++ DNV+++S S L D G C Q L+
Sbjct: 170 YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGS-HAALCDFGHAVCLQPDGLGKDLLT 228
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
P E APEV+ + DVWS+ + +L+G P FRG
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L + Q E +Y+ Q L GL+Y+H I H G D ++ G H L
Sbjct: 150 GGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH-GDVKADNVLLSSDGSHAAL 208
Query: 524 TDFG 527
DFG
Sbjct: 209 CDFG 212
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 149 DLKPSNLLLN--TTXDLKIXDFGLAR 172
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKIXDFG 169
Query: 528 LSR 530
L+R
Sbjct: 170 LAR 172
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKIXDFGLARVADPDHDHTGFL 184
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 185 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DFGL+R
Sbjct: 151 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 179
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGY---- 188
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 173
Query: 525 DFGLSR 530
DFGL+R
Sbjct: 174 DFGLAR 179
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 76/192 (39%), Gaps = 46/192 (23%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
+ Y G LG G GIV + SG+ +A K + + +YK+ ELDIM L H N
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL-QDPRYKN---RELDIMKVLDHVN 61
Query: 242 LVRLHD-SYETKDS-------------------------------------FTIISELAG 263
+++L D Y T D +I E
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 264 GG--ELLHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 320
++L S R + I+ YI QL + ++H L I H + P +LLV +
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV-NSKDNT 180
Query: 321 LLLTDFGLSRRI 332
L L DFG ++++
Sbjct: 181 LKLCDFGSAKKL 192
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
+ + + ++H G+CH +I+P N+++ S + +KL D G +++ + I +
Sbjct: 147 IYQLFRAVGFIHSLGICHRDIKPQNLLVNS-KDNTLKLCDFGSAKKLIPSEPSVAXICS- 204
Query: 1012 NPEFAAPEV-LAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
+ APE+ L P D+WS G + L+ G F G++
Sbjct: 205 -RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET 246
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
I+ YI QL + ++H L I H + P +LLV + L L DFG ++++
Sbjct: 143 ISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV-NSKDNTLKLCDFGSAKKL 192
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 156
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 157 DLKPSNLLLNTTCD--LKICDFGLAR 180
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 135 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 192
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 193 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 239
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 120 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 177
Query: 528 LSR 530
L+R
Sbjct: 178 LAR 180
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 149 DLKPSNLLLNTTCD--LKICDFGLAR 172
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 184
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 185 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 231
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 112 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 169
Query: 528 LSR 530
L+R
Sbjct: 170 LAR 172
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 153 DLKPSNLLLN--TTXDLKICDFGLAR 176
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKICDFG 173
Query: 528 LSR 530
L+R
Sbjct: 174 LAR 176
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTGFL 188
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 189 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA-SVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
++ + L+YLH + H +++P+N+V+ + + K+IDLG + + + + T
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 186
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
++ APE+L ++ D WS G LA+ ++G PF +P
Sbjct: 187 L--QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 229
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 19/163 (11%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHR 240
++ + LG G G V + + +G A K ++ K + L E+ IM +L H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLNHP 72
Query: 241 NLVRLHD------SYETKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLS 291
N+V + D + E GG+L L+ E I + + S
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
L Y+H I H L P + +V PG + L+ + D G ++ +
Sbjct: 133 ALRYLHENRIIHRDLKPEN-IVLQPGPQRLIHKIIDLGYAKEL 174
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1182
APE+L ++ D WS G LA+ ++G PF +P
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 146
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 147 DLKPSNLLLNTTCD--LKICDFGLAR 170
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 182
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 183 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 229
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 110 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 167
Query: 528 LSR 530
L+R
Sbjct: 168 LAR 170
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122)
Length = 677
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMA-SVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
++ + L+YLH + H +++P+N+V+ + + K+IDLG + + + + T
Sbjct: 128 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 187
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
++ APE+L ++ D WS G LA+ ++G PF +P
Sbjct: 188 L--QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 230
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 19/163 (11%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHR 240
++ + LG G G V + + +G A K ++ K + L E+ IM +L H
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLNHP 73
Query: 241 NLVRLHD------SYETKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLS 291
N+V + D + E GG+L L+ E I + + S
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
L Y+H I H L P + +V PG + L+ + D G ++ +
Sbjct: 134 ALRYLHENRIIHRDLKPEN-IVLQPGPQRLIHKIIDLGYAKEL 175
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1182
APE+L ++ D WS G LA+ ++G PF +P
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 153
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 154 DLKPSNLLLNTTCD--LKICDFGLAR 177
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 132 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 189
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 190 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 236
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 117 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 174
Query: 528 LSR 530
L+R
Sbjct: 175 LAR 177
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 154
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 155 DLKPSNLLLNTTCD--LKICDFGLAR 178
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 133 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 190
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 191 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 237
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 118 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 175
Query: 528 LSR 530
L+R
Sbjct: 176 LAR 178
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 145
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 146 DLKPSNLLLNTTCD--LKICDFGLAR 169
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 124 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 181
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 182 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 228
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 109 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 166
Query: 528 LSR 530
L+R
Sbjct: 167 LAR 169
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 169 DLKPSNLLLNTTCD--LKICDFGLAR 192
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 204
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 205 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 251
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 132 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 189
Query: 528 LSR 530
L+R
Sbjct: 190 LAR 192
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 153 DLKPSNLLLNTTCD--LKICDFGLAR 176
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 188
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 189 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 173
Query: 528 LSR 530
L+R
Sbjct: 174 LAR 176
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 153 DLKPSNLLLNTTCD--LKICDFGLAR 176
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 188
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 189 XEXVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 173
Query: 528 LSR 530
L+R
Sbjct: 174 LAR 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 153
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 154 DLKPSNLLLNTTCD--LKICDFGLAR 177
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 132 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 189
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 190 XEXVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 236
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 117 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 174
Query: 528 LSR 530
L+R
Sbjct: 175 LAR 177
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
Y + L+GL+YLH R + H +++ DNV+++S S L D G C Q +L+
Sbjct: 189 YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGS-HAALCDFGHAVCLQPDGLGKSLLT 247
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
P E APEV+ + DVWS+ + +L+G P FRG
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 27/191 (14%)
Query: 146 GTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDE---------LGRGVT 196
G+ S + EDNE G + + KP+ Y++ +E LGRG
Sbjct: 59 GSRSREPSPKTEDNE----------GVLLTEKLKPVD--YEYREEVHWATHQLRLGRGSF 106
Query: 197 GIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT 256
G V+ ++ +G A K + + + EL L +V L+ +
Sbjct: 107 GEVHRMEDKQTGFQCAVKKV-----RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVN 161
Query: 257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 316
I EL GG L + Q E +Y+ Q L GL+Y+H I H G D ++
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH-GDVKADNVLLSS 220
Query: 317 GGRHLLLTDFG 327
G H L DFG
Sbjct: 221 DGSHAALCDFG 231
Score = 35.4 bits (80), Expect = 0.21, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L + Q E +Y+ Q L GL+Y+H I H G D ++ G H L
Sbjct: 169 GGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH-GDVKADNVLLSSDGSHAAL 227
Query: 524 TDFG 527
DFG
Sbjct: 228 CDFG 231
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 146
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 147 DLKPSNLLLNTTCD--LKICDFGLAR 170
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 182
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 183 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 229
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 110 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 167
Query: 528 LSR 530
L+R
Sbjct: 168 LAR 170
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ H N++ ++D
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 151 DLKPSNLLLNTTSD--LKICDFGLAR 174
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD--LKICDFG 171
Query: 528 LSR 530
L+R
Sbjct: 172 LAR 174
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TSDLKICDFGLARVADPDHDHTGFL 186
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 187 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLC-- 238
Y+ E+G G G V+ A + +G + A +V TG+ S + E+ ++ L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 71
Query: 239 -HRNLVRLHD-------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
H N+VRL D ETK + L + TE I + QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLL 130
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
GLD++H + H L P ++LV G + L DFGL+ RI SF
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA-RIYSF 172
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 942 IPT-THKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
+PT T KD + +L GL +LH + H +++P N+++ S S Q+KL D G + +
Sbjct: 117 VPTETIKDM--MFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSF 172
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
L + T + APEVL + D+WS G + + FRG S+
Sbjct: 173 QMALTSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
D+ T+ D VP G E + + + QLL GLD++H + H L P
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDM--------------MFQLLRGLDFLHSHRVVHRDLKPQ 149
Query: 510 DLLVAHPGGRHLLLTDFGLSRRITSF 535
++LV G + L DFGL+ RI SF
Sbjct: 150 NILVTSSG--QIKLADFGLA-RIYSF 172
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ H N++ ++D
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 151 DLKPSNLLLNTTCD--LKICDFGLAR 174
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 171
Query: 528 LSR 530
L+R
Sbjct: 172 LAR 174
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 186
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 187 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 233
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A K ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 153 DLKPSNLLLNTTCD--LKICDFGLAR 176
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 188
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 189 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 116 LYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 173
Query: 528 LSR 530
L+R
Sbjct: 174 LAR 176
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLC-- 238
Y+ E+G G G V+ A + +G + A +V TG+ S + E+ ++ L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 71
Query: 239 -HRNLVRLHD-------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
H N+VRL D ETK + L + TE I + QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLL 130
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
GLD++H + H L P ++LV G + L DFGL+ RI SF
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA-RIYSF 172
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 942 IPT-THKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
+PT T KD + +L GL +LH + H +++P N+++ S S Q+KL D G + +
Sbjct: 117 VPTETIKDM--MFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSF 172
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
L + T + APEVL + D+WS G + + FRG S+
Sbjct: 173 QMALTSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
D+ T+ D VP G E + + + QLL GLD++H + H L P
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDM--------------MFQLLRGLDFLHSHRVVHRDLKPQ 149
Query: 510 DLLVAHPGGRHLLLTDFGLSRRITSF 535
++LV G + L DFGL+ RI SF
Sbjct: 150 NILVTSSG--QIKLADFGLA-RIYSF 172
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 224 KSLFKNELDIMNQLCHRNLVRLHDSY--ETKDSFTIISELAGGGELLHSLTR----QSYY 277
K + +E++++ +L H N+VR +D T + I+ E GG+L +T+ + Y
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 278 TEYDIAHYIRQLLSGLDYMHRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
E + + QL L HR S + H L P ++ + G +++ L DFGL+R +
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--DGKQNVKLGDFGLARIL 166
Query: 333 ---TSFGK 337
TSF K
Sbjct: 167 NHDTSFAK 174
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 969 HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028
H +++P NV + ++V KL D G R+ T P + +PE +
Sbjct: 139 HRDLKPANVFLDGKQNV--KLGDFGLA-RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNE 195
Query: 1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV---NFVRYRFEYLFKELTQEATRFLML 1085
++D+WS G L Y L + PF S+ E + F R + Y EL + TR L L
Sbjct: 196 KSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-SDELNEIITRMLNL 254
Score = 36.6 bits (83), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV---NFVRYRFEYLFK 1200
+PE + ++D+WS G L Y L + PF S+ E + F R + Y
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-SD 242
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHEN 1230
EL + TR L L RP+VEE EN
Sbjct: 243 ELNEIITRMLNL----KDYHRPSVEEILEN 268
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 224 KSLFKNELDIMNQLCHRNLVRLHDSY--ETKDSFTIISELAGGGELLHSLTR----QSYY 277
K + +E++++ +L H N+VR +D T + I+ E GG+L +T+ + Y
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 278 TEYDIAHYIRQLLSGLDYMHRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
E + + QL L HR S + H L P ++ + G +++ L DFGL+R +
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--DGKQNVKLGDFGLARIL 166
Query: 333 ---TSFGK 337
TSF K
Sbjct: 167 NHDTSFAK 174
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 969 HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028
H +++P NV + ++V KL D G R+ T P + +PE +
Sbjct: 139 HRDLKPANVFLDGKQNV--KLGDFGLA-RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNE 195
Query: 1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV---NFVRYRFEYLFKELTQEATRFLML 1085
++D+WS G L Y L + PF S+ E + F R + Y EL + TR L L
Sbjct: 196 KSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-SDELNEIITRMLNL 254
Score = 36.6 bits (83), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV---NFVRYRFEYLFK 1200
+PE + ++D+WS G L Y L + PF S+ E + F R + Y
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-SD 242
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHEN 1230
EL + TR L L RP+VEE EN
Sbjct: 243 ELNEIITRMLNL----KDYHRPSVEEILEN 268
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G +G G G VY + A K++ T Q FKNE+ ++ + H N++ L
Sbjct: 13 GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 68
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
Y T I+++ G L H L T+ DIA RQ G+DY+H SI
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 125
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
H L ++ + + + DFGL+
Sbjct: 126 IHRDLKSNNIFLHE--DLTVKIGDFGLA 151
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 19/172 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC----------HR 240
LG G G V+ + GR YA K + S F+ D +L H
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVK-------RSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
VRL ++E + +EL G H + E + Y+R L L ++H
Sbjct: 118 CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQAL 352
+ HL + P ++ + P GR L DFGL + + G E D RY+ L
Sbjct: 178 LVHLDVKPANIFLG-PRGR-CKLGDFGLLVELGTAGAGEVQEGDPRYMAPEL 227
Score = 33.5 bits (75), Expect = 0.79, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPE 1014
L L +LH +GL HL+++P N+ + + KL D G + +LGT + +P
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGP--RGRCKLGDFGL---LVELGTAGAGEVQEGDPR 221
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQ 1059
+ APE+L + DV+S G+ + V + P G+ + RQ
Sbjct: 222 YMAPELL-QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ 266
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 33/171 (19%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
E G+ V +H R+ A K++ K N S ++ E +++ Q+ H ++++L+
Sbjct: 35 EFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQS-------------------------YYTEYD 281
+ +I E A G L R+S T D
Sbjct: 93 GACSQDGPLLLIVEYAKYGSL-RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ + Q+ G+ Y+ +S+ H L ++LVA GR + ++DFGLSR +
Sbjct: 152 LISFAWQISQGMQYLAEMSLVHRDLAARNILVAE--GRKMKISDFGLSRDV 200
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP-EFA 1016
G+QYL L H ++ N+++A R ++K+ D G ++ V + + + P ++
Sbjct: 162 GMQYLAEMSLVHRDLAARNILVAEGR--KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM 219
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1075
A E L + Q+DVWS GVL + +++ G +P+ G PE N+ +R E
Sbjct: 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-IPPERLFNLLKTGHRMERP-DNC 277
Query: 1076 TQEATRFLMLIFKHEVD 1092
++E R ++ +K E D
Sbjct: 278 SEEMYRLMLQCWKQEPD 294
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
T D+ + Q+ G+ Y+ +S+ H L ++LVA GR + ++DFGLSR +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAE--GRKMKISDFGLSRDV 200
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYL 1198
K A E L + Q+DVWS GVL + +++ G +P+ G PE N+ +R E
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-IPPERLFNLLKTGHRMERP 274
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKR 1243
++E R ++ +K+ P KRP + ++ + M+K+R
Sbjct: 275 -DNCSEEMYRLMLQCWKQEPDKRPVFADISKDL----EKMMVKRR 314
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
++G G G GR Y K + + ++ + + E+ ++ + H N+V+ +
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
S+E S I+ + GG+L + Q + E I + Q+ L ++H I H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ ++ + G + L DFG++R + S
Sbjct: 151 IKSQNIFLTKDG--TVQLGDFGIARVLNS 177
Score = 37.7 bits (86), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
L+++H R + H +I+ N+ + +VQ L D G RV + P + +
Sbjct: 137 ALKHVHDRKILHRDIKSQNIFLTKDGTVQ--LGDFGIA-RVLNSTVELARACIGTPYYLS 193
Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
PE+ +P ++D+W+ G + Y L + F S
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 34/184 (18%)
Query: 1071 LFKELTQEATRFLMLIFKHEVDW-----ITLANNIDHEFWHVKDLKRETNYTFRLSAKNV 1125
LFK + A + ++ +DW + L + D + H +D+K + + L+
Sbjct: 110 LFKRIN--AQKGVLFQEDQILDWFVQICLALKHVHDRKILH-RDIKSQNIF---LTKDGT 163
Query: 1126 IGWSEKGIPSALFKTKEQA-----------PEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1174
+ + GI L T E A PE+ +P ++D+W+ G + Y L +
Sbjct: 164 VQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
Query: 1175 PFRGQSEPETRQNV---NF--VRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
F S + +F V + Y + L + +FKR P RP+V E
Sbjct: 224 AFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQ-------LFKRNPRDRPSVNSILE 276
Query: 1230 NRWL 1233
++
Sbjct: 277 KGFI 280
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + D+GL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDYGLAR 173
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDYGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
D+GL+R
Sbjct: 168 DYGLAR 173
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 77/183 (42%), Gaps = 25/183 (13%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGNQYKSLFKNELDIMNQLC 238
T Y+ E+G G G VY A + SG A K V G+ S + E+ ++ +L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLE 61
Query: 239 ---HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-----------IAH 284
H N+VRL D T + I L+ Q T D I
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-----TLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYD 344
+RQ L GLD++H I H L P ++LV G + L DFGL+R + L+P+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKLADFGLARIYSYQMALDPVVVT 174
Query: 345 VRY 347
+ Y
Sbjct: 175 LWY 177
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
D++T+ D P G E + L +RQ L GLD++H I H L P
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDL--------------MRQFLRGLDFLHANCIVHRDLKPE 141
Query: 510 DLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 541
++LV G + L DFGL+R + L+P+
Sbjct: 142 NILVT--SGGTVKLADFGLARIYSYQMALDPV 171
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L GL +LH + H +++P+N+++ S VKL D G R+ + P+ +
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLA-RIYSYQMALDPVVV-TLWY 177
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
APEVL + D+WS G + + F G SE
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMN 235
+ D Y +GRG G VY A ++++ +N A K + ++ L E+ I+N
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN---RMFEDLIDCKRILREITILN 80
Query: 236 QLCHRNLVRLH-----DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+L ++RL+ D D I+ E+A +L + TE I + LL
Sbjct: 81 RLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
G +++H I H L P + L+ + + DFGL+R I S
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDCS--VKVCDFGLARTINS 181
Score = 30.4 bits (67), Expect = 6.9, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 476 YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ TE I + LL G +++H I H L P + L+ + + DFGL+R I S
Sbjct: 125 FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCS--VKVCDFGLARTINS 181
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 955 VLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
V G+ YLH R + H N++ N+++ + VK+ D G + R+ L
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVD--KKYTVKVCDFGLS-RLKASTFLSSKSAAGT 202
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
PE+ APEVL +EP ++DV+S GV+ + L + P+ + + V F R E
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE 259
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1194
SA + APEVL +EP ++DV+S GV+ + L + P+ + + V F R
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPT 1223
E + + L + + + P KRP+
Sbjct: 258 LE-IPRNLNPQVAAIIEGCWTNEPWKRPS 285
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
LG G G+V+ AV+ + A K + Q E+ I+ +L H N+V++ +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEIL- 77
Query: 251 TKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH--------------YIRQLLSGLDYM 296
S + +++ G L+S+ Y E D+A+ ++ QLL GL Y+
Sbjct: 78 -GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYI 136
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
H ++ H L P +L + + L + DFGL+R
Sbjct: 137 HSANVLHRDLKPANLFI-NTEDLVLKIGDFGLAR 169
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTLIHPINT 1010
+L GL+Y+H + H +++P N+ + + + +K+ D G + + + G L + T
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFI-NTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 1011 PNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
+ +P +L + + D+W+AG + +L+G + F G E E Q +
Sbjct: 188 K--WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
++ QLL GL Y+H ++ H L P +L + + L + DFGL+R
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFI-NTEDLVLKIGDFGLAR 169
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ V +L GL+Y+H G+ H +++P NV A +++++D G ++ + T
Sbjct: 127 FLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDCELRILDFGLARQADEEMTGY---- 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL G + F G
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 223
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + + A K ++ ++SL EL ++ L H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLS---RPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 246 HDSYETKDSFTIISEL----AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
D + S SE+ G L+++ + ++ + + QLL GL Y+H I
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 144
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
H L P ++ V L + DFGL+R+
Sbjct: 145 IHRDLKPSNVAVNEDC--ELRILDFGLARQ 172
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + ++ + + QLL GL Y+H I H L P ++ V L +
Sbjct: 108 GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC--ELRIL 165
Query: 525 DFGLSRR 531
DFGL+R+
Sbjct: 166 DFGLARQ 172
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT--EFDNLRSLRHER 654
+ Q + + G + V A + + + KL +H T E L+ L+HE
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 80
Query: 655 IASLLEAYKPSTTASNIA-VLVMEKLQGADV 684
+ LL+ + P+T+ + + V ++ L GAD+
Sbjct: 81 VIGLLDVFTPATSIEDFSEVYLVTTLMGADL 111
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHD 247
D LG+G T V+ + +G +A KV + + E +++ +L H+N+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 248 SYE--TKDSFTIISELAGGGELLHSLTRQSY---YTEYDIAHYIRQLLSGLDYMHRLSIA 302
E T +I E G L L S E + +R ++ G++++ I
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 303 HLGLTPGDLL--VAHPGGRHLLLTDFGLSRRI 332
H + PG+++ + G LTDFG +R +
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNV--VMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
V+ G+ +L G+ H NI+P N+ V+ KL D G + + + T
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE 180
Query: 1012 --NPEFAAPEVLA---EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063
+P+ VL ++ D+WS GV Y +G+ PFR P + V +
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 486 IRQLLSGLDYMHRLSIAHLGLTPGDLL--VAHPGGRHLLLTDFGLSRRITSFGKLNPLEY 543
+R ++ G++++ I H + PG+++ + G LTDFG +R + + L Y
Sbjct: 118 LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL-Y 176
Query: 544 GNGQY 548
G +Y
Sbjct: 177 GTEEY 181
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + + A + ++ +Q Y E+ I+ + H N++ ++D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + + I +++ Q+L GL Y+H ++ H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 153 DLKPSNLLLNTTCD--LKICDFGLAR 176
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----TKLGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 188
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 189 TEYVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD--LKICDFG 173
Query: 528 LSR 530
L+R
Sbjct: 174 LAR 176
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHD 247
D LG+G T V+ + +G +A KV + + E +++ +L H+N+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 248 SYE--TKDSFTIISELAGGGELLHSLTRQSY---YTEYDIAHYIRQLLSGLDYMHRLSIA 302
E T +I E G L L S E + +R ++ G++++ I
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 303 HLGLTPGDLL--VAHPGGRHLLLTDFGLSRRI 332
H + PG+++ + G LTDFG +R +
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNV--VMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
V+ G+ +L G+ H NI+P N+ V+ KL D G + + + T
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEE 180
Query: 1012 --NPEFAAPEVLA---EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063
+P+ VL ++ D+WS GV Y +G+ PFR P + V +
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Score = 30.0 bits (66), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 486 IRQLLSGLDYMHRLSIAHLGLTPGDLL--VAHPGGRHLLLTDFGLSRRI 532
+R ++ G++++ I H + PG+++ + G LTDFG +R +
Sbjct: 118 LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
+G G G+V A + A K ++ +Q Y E+ I+ + H N++ + D
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ E I+ +L L+ L + + I +++ Q+L GL Y+H ++ H
Sbjct: 111 RASTLEAMRDVYIVQDLMETD--LYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L P +LL+ L + DFGL+R
Sbjct: 169 DLKPSNLLINTTCD--LKICDFGLAR 192
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK----LGTL 1004
Y + +L GL+Y+H + H +++P N+++ + + +K+ D G + G L
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLINT--TCDLKICDFGLARIADPEHDHTGFL 204
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
+ T + APE++ + ++ D+WS G + +LS F G+
Sbjct: 205 TEXVAT--RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 251
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 132 LYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD--LKICDFG 189
Query: 528 LSR 530
L+R
Sbjct: 190 LAR 192
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 187 FGDELGRGVTGIVYHAVERSSGR-----NYAAKVM--TGKGNQYKSLFKNELDIMNQLC- 238
FG LG G G V A G+ A K++ T ++ ++L +EL IM+ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM-SELKIMSHLGQ 108
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIA--------------H 284
H N+V L + +I+E G+LL+ L R+S E D A H
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ Q+ G+ ++ + H + ++L+ + G + DFGL+R I +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMN 216
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ V G+ +L + H ++ NV++ + K+ D G + + I N
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYIVKGNARL 228
Query: 1013 P-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE + + Q+DVWS G+L + + S G +P+ G
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+ ++NY + +A+ + W APE + + Q+DVWS
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKW--------------MAPESIFDCVYTVQSDVWSY 252
Query: 1163 GVLAYVLLS-GASPFRG 1178
G+L + + S G +P+ G
Sbjct: 253 GILLWEIFSLGLNPYPG 269
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 187 FGDELGRGVTGIVYHAVERSSGR-----NYAAKVM--TGKGNQYKSLFKNELDIMNQLC- 238
FG LG G G V A G+ A K++ T ++ ++L +EL IM+ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM-SELKIMSHLGQ 108
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIA--------------H 284
H N+V L + +I+E G+LL+ L R+S E D A H
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ Q+ G+ ++ + H + ++L+ + G + DFGL+R I +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMN 216
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ V G+ +L + H ++ NV++ + K+ D G + + I N
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYIVKGNARL 228
Query: 1013 P-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE + + Q+DVWS G+L + + S G +P+ G
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+ ++NY + +A+ + W APE + + Q+DVWS
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKW--------------MAPESIFDCVYTVQSDVWSY 252
Query: 1163 GVLAYVLLS-GASPFRG 1178
G+L + + S G +P+ G
Sbjct: 253 GILLWEIFSLGLNPYPG 269
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 125 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 182
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 183 ----EYNVRVASRYFKGPEL 198
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 125 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 175
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 131 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 182
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 183 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ V +L GL+Y+H G+ H +++P NV A +++++D G ++ + T
Sbjct: 135 FLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDSELRILDFGLARQADEEMTGY---- 188
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL G + F G
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + + A K ++ ++SL EL ++ L H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLS---RPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 246 HDSYETKDSFTIISEL----AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
D + S SE+ G L+++ + ++ + + QLL GL Y+H I
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
H L P ++ V L + DFGL+R+
Sbjct: 153 IHRDLKPSNVAVNEDS--ELRILDFGLARQ 180
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + ++ + + QLL GL Y+H I H L P ++ V L +
Sbjct: 116 GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS--ELRIL 173
Query: 525 DFGLSRR 531
DFGL+R+
Sbjct: 174 DFGLARQ 180
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT--EFDNLRSLRHER 654
+ Q + + G + V A + + + KL +H T E L+ L+HE
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 655 IASLLEAYKPSTTASNIA-VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ LL+ + P+T+ + + V ++ L GAD+ + + S+ ++++V ++ Q
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ-ALSDEHVQFLVYQ 139
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
Query: 191 LGRGVTGIVYHAVER-SSGRN---YAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
+G G G VY + + SSG+ A K + G + + F E IM Q H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
II+E G L L + ++ + +R + +G+ Y+ ++ H
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR 171
Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSR 330
L ++LV +L+ ++DFGLSR
Sbjct: 172 DLAARNILV----NSNLVCKVSDFGLSR 195
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 181
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 182 ----EYNVRVASRYFKGPEL 197
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 174
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 130 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 181
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 181
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 182 ----EYNVRVASRYFKGPEL 197
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 174
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 130 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 181
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 180
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 180
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 180
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 180
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ V +L GL+Y+H G+ H +++P NV A +++++D G ++ + T
Sbjct: 135 FLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDSELRILDFGLARQADEEMTGY---- 188
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL G + F G
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + + A K ++ ++SL EL ++ L H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLS---RPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 246 HDSYETKDSFTIISEL----AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
D + S SE+ G L+++ + ++ + + QLL GL Y+H I
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
H L P ++ V L + DFGL+R+
Sbjct: 153 IHRDLKPSNVAVNEDS--ELRILDFGLARQ 180
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + ++ + + QLL GL Y+H I H L P ++ V L +
Sbjct: 116 GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS--ELRIL 173
Query: 525 DFGLSRR 531
DFGL+R+
Sbjct: 174 DFGLARQ 180
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT--EFDNLRSLRHER 654
+ Q + + G + V A + + + KL +H T E L+ L+HE
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 655 IASLLEAYKPSTTASNIA-VLVMEKLQGADV 684
+ LL+ + P+T+ + + V ++ L GAD+
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADL 119
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGNQYKSLFKNELDIMNQLC 238
T Y+ E+G G G VY A + SG A K V G+ S + E+ ++ +L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLE 61
Query: 239 ---HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-----------IAH 284
H N+VRL D T + I L+ Q T D I
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-----TLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
+RQ L GLD++H I H L P ++LV G + L DFGL+R
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKLADFGLAR 160
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
D++T+ D P G E + L +RQ L GLD++H I H L P
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDL--------------MRQFLRGLDFLHANCIVHRDLKPE 141
Query: 510 DLLVAHPGGRHLLLTDFGLSR 530
++LV G + L DFGL+R
Sbjct: 142 NILVT--SGGTVKLADFGLAR 160
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L GL +LH + H +++P+N+++ S VKL D G R+ + P+ +
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLA-RIYSYQMALFPVVV-TLWY 177
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
APEVL + D+WS G + + F G SE
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 180
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGNQYKSLFKNELDIMNQLC 238
T Y+ E+G G G VY A + SG A K V G+ S + E+ ++ +L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLE 61
Query: 239 ---HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-----------IAH 284
H N+VRL D T + I L+ Q T D I
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-----TLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
+RQ L GLD++H I H L P ++LV G + L DFGL+R
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKLADFGLAR 160
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
D++T+ D P G E + L +RQ L GLD++H I H L P
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDL--------------MRQFLRGLDFLHANCIVHRDLKPE 141
Query: 510 DLLVAHPGGRHLLLTDFGLSR 530
++LV G + L DFGL+R
Sbjct: 142 NILVT--SGGTVKLADFGLAR 160
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L GL +LH + H +++P+N+++ S VKL D G R+ + P+ +
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLA-RIYSYQMALAPVVV-TLWY 177
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
APEVL + D+WS G + + F G SE
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 129 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 180
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 955 VLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
V G+ YLH R + H +++ N+++ + VK+ D G + R+ L
Sbjct: 146 VAKGMNYLHNRNPPIVHRDLKSPNLLVD--KKYTVKVCDFGLS-RLKASXFLXSKXAAGT 202
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
PE+ APEVL +EP ++DV+S GV+ + L + P+ + + V F R E
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE 259
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEVL +EP ++DV+S GV+ + L + P+ + + V F R E + + L
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE-IPRNL 264
Query: 1203 TQEATRFLMLIFKRAPGKRPT 1223
+ + + P KRP+
Sbjct: 265 NPQVAAIIEGCWTNEPWKRPS 285
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+ GK
Sbjct: 144 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 201
Query: 338 LNPLEYDVRYVRQALRHPWL 357
EY+VR + + P L
Sbjct: 202 ----EYNVRVASRYFKGPEL 217
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T+YDI +YI +LL LDY H I H + P ++++ H R L L D+GL+
Sbjct: 144 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 194
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
Y + +L L Y H +G+ H +++P N VM +++LID G L HP
Sbjct: 150 YYIYELLKALDYCHSQGIMHRDVKPHN-VMIDHELRKLRLIDWG-------LAEFYHPGK 201
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + + + D+WS G + ++ PF
Sbjct: 202 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAA-KVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLH 246
+G G G V ++ G+ + + T KG + + F +E IM Q H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
I++E G L L +T + +R + SG+ Y+ +S H
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD 143
Query: 306 LTPGDLLVAHPGGRHLL--LTDFGLSR 330
L ++LV +L+ ++DFGLSR
Sbjct: 144 LAARNILV----NSNLVCKVSDFGLSR 166
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + FGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILGFGLAR 173
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++ G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILGFGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
FGL+R
Sbjct: 168 GFGLAR 173
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAA-KVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLH 246
+G G G V ++ G+ + + T KG + + F +E IM Q H N++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
I++E G L L +T + +R + SG+ Y+ +S H
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD 141
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
L ++LV ++DFGLSR
Sbjct: 142 LAARNILVNS--NLVCKVSDFGLSR 164
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 945 THKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T +D C V G+++L ++ H ++ NV++ + V K+ D G + +
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVV--KICDFGLARDIMSDSN 227
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
+ N P ++ APE L E ++DVWS G+L + + S G +P+ G
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+ ++NY R +A+ + W APE L E ++DVWS
Sbjct: 215 DFGLARDIMSDSNYVVRGNARLPVKW--------------MAPESLFEGIYTIKSDVWSY 260
Query: 1163 GVLAYVLLS-GASPFRG 1178
G+L + + S G +P+ G
Sbjct: 261 GILLWEIFSLGVNPYPG 277
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + DF L+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFYLAR 173
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFYLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
DF L+R
Sbjct: 168 DFYLAR 173
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 33/171 (19%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
E G+ V +H R+ A K++ K N S ++ E +++ Q+ H ++++L+
Sbjct: 35 EFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQS-------------------------YYTEYD 281
+ +I E A G L R+S T D
Sbjct: 93 GACSQDGPLLLIVEYAKYGSL-RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ + Q+ G+ Y+ + + H L ++LVA GR + ++DFGLSR +
Sbjct: 152 LISFAWQISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDV 200
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP-EFA 1016
G+QYL L H ++ N+++A R ++K+ D G ++ V + + + P ++
Sbjct: 162 GMQYLAEMKLVHRDLAARNILVAEGR--KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM 219
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1075
A E L + Q+DVWS GVL + +++ G +P+ G PE N+ +R E
Sbjct: 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERP-DNC 277
Query: 1076 TQEATRFLMLIFKHEVD 1092
++E R ++ +K E D
Sbjct: 278 SEEMYRLMLQCWKQEPD 294
Score = 37.4 bits (85), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYL 1198
K A E L + Q+DVWS GVL + +++ G +P+ G PE N+ +R E
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-PERLFNLLKTGHRMERP 274
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKR 1243
++E R ++ +K+ P KRP + ++ + M+K+R
Sbjct: 275 -DNCSEEMYRLMLQCWKQEPDKRPVFADISKDL----EKMMVKRR 314
Score = 36.6 bits (83), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
T D+ + Q+ G+ Y+ + + H L ++LVA GR + ++DFGLSR +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDV 200
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of
The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L L Y H +G+ H +++P N VM + +++LID G L HP
Sbjct: 136 FYMYELLKALDYCHSKGIMHRDVKPHN-VMIDHQQKKLRLIDWG-------LAEFYHPAQ 187
Query: 1010 TPNPE-----FAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
N F PE+L + ++ + D+WS G + ++ PF
Sbjct: 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T++DI Y+ +LL LDY H I H + P ++++ H + L L D+GL+
Sbjct: 130 TDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK-LRLIDWGLA 180
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T++DI Y+ +LL LDY H I H + P ++++ H + L L D+GL+
Sbjct: 130 TDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK-LRLIDWGLA 180
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 33/171 (19%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
E G+ V +H R+ A K++ K N S ++ E +++ Q+ H ++++L+
Sbjct: 35 EFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQS-------------------------YYTEYD 281
+ +I E A G L R+S T D
Sbjct: 93 GACSQDGPLLLIVEYAKYGSL-RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ + Q+ G+ Y+ + + H L ++LVA GR + ++DFGLSR +
Sbjct: 152 LISFAWQISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDV 200
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP-EFA 1016
G+QYL L H ++ N+++A R ++K+ D G ++ V + + + P ++
Sbjct: 162 GMQYLAEMKLVHRDLAARNILVAEGR--KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM 219
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1075
A E L + Q+DVWS GVL + +++ G +P+ G PE N+ +R E
Sbjct: 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-IPPERLFNLLKTGHRMERP-DNC 277
Query: 1076 TQEATRFLMLIFKHEVD 1092
++E R ++ +K E D
Sbjct: 278 SEEMYRLMLQCWKQEPD 294
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYL 1198
K A E L + Q+DVWS GVL + +++ G +P+ G PE N+ +R E
Sbjct: 216 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-IPPERLFNLLKTGHRMERP 274
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKR 1243
++E R ++ +K+ P KRP + ++ + M+K+R
Sbjct: 275 -DNCSEEMYRLMLQCWKQEPDKRPVFADISKDL----EKMMVKRR 314
Score = 36.6 bits (83), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
T D+ + Q+ G+ Y+ + + H L ++LVA GR + ++DFGLSR +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDV 200
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L L Y H +G+ H +++P N VM + +++LID G L HP
Sbjct: 141 FYMYELLKALDYCHSKGIMHRDVKPHN-VMIDHQQKKLRLIDWG-------LAEFYHPAQ 192
Query: 1010 TPNPE-----FAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
N F PE+L + ++ + D+WS G + ++ PF
Sbjct: 193 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 238
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T++DI Y+ +LL LDY H I H + P ++++ H + L L D+GL+
Sbjct: 135 TDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK-LRLIDWGLA 185
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
T++DI Y+ +LL LDY H I H + P ++++ H + L L D+GL+
Sbjct: 135 TDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK-LRLIDWGLA 185
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ + K K APE + + Q+DVWS GVL
Sbjct: 172 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 287
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 288 TFSELVEH 295
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ + K K APE + + Q+DVWS GVL
Sbjct: 172 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 287
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 288 TFSELVEH 295
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + D GL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDAGLAR 173
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDAGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
D GL+R
Sbjct: 168 DAGLAR 173
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 200 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 296
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 224 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 283
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 284 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 339
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 340 TFSELVEH 347
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++L+ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVLIDHE-HRKLRLIDWGLA 179
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++L+ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE-HRKLRLIDWGLA 179
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P NV++ +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHR-KLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 580 YSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENL 624
+ E +EW + D YQ + ++ RGK+S V +A N E +
Sbjct: 24 WDYESHVVEWGNQ---DDYQLVRKLGRGKYSEVFEAINITNNEKV 65
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 209 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 305
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 233 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 292
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 293 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 348
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 349 TFSELVEH 356
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 24/157 (15%)
Query: 189 DELGRGVTG-IVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRLH 246
D LG G G IVY + R+ A K + + S E+ ++ + H N++R
Sbjct: 30 DVLGHGAEGTIVYRGM--FDNRDVAVKRIL---PECFSFADREVQLLRESDEHPNVIRYF 84
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY-------IRQLLSGLDYMHRL 299
+ + + I EL T Q Y + D AH ++Q SGL ++H L
Sbjct: 85 CTEKDRQFQYIAIELCAA-------TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137
Query: 300 SIAHLGLTPGDLLVAHP---GGRHLLLTDFGLSRRIT 333
+I H L P ++L++ P G +++DFGL +++
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 468 LHSLTRQSYYTEYDIAHY-------IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP---G 517
L + T Q Y + D AH ++Q SGL ++H L+I H L P ++L++ P G
Sbjct: 99 LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHG 158
Query: 518 GRHLLLTDFGLSRRIT 533
+++DFGL +++
Sbjct: 159 KIKAMISDFGLCKKLA 174
Score = 37.4 bits (85), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRS---VQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
GL +LH + H +++P N++++ + ++ + D G C + + P
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
Query: 1014 E-FAAPEVLAEE----PIFPQTDVWSAG-VLAYVLLSGASPF 1049
E + APE+L+E+ P + D++SAG V YV+ G+ PF
Sbjct: 190 EGWIAPEMLSEDCKENPTY-TVDIFSAGCVFYYVISEGSHPF 230
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 224 KSLFKNELDIMNQLCHRNLVRLHDSY--ETKDSFTIISELAGGGELLHSLTR----QSYY 277
K + +E++++ +L H N+VR +D T + I+ E GG+L +T+ + Y
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 278 TEYDIAHYIRQLLSGLDYMHRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
E + + QL L HR S + H L P ++ + G +++ L DFGL+R
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--DGKQNVKLGDFGLAR 164
Score = 37.0 bits (84), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 969 HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028
H +++P NV + ++V KL D G R+ P + +PE +
Sbjct: 139 HRDLKPANVFLDGKQNV--KLGDFGLA-RILNHDEDFAKEFVGTPYYMSPEQMNRMSYNE 195
Query: 1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV---NFVRYRFEYLFKELTQEATRFLML 1085
++D+WS G L Y L + PF S+ E + F R + Y EL + TR L L
Sbjct: 196 KSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-SDELNEIITRMLNL 254
Score = 36.6 bits (83), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV---NFVRYRFEYLFK 1200
+PE + ++D+WS G L Y L + PF S+ E + F R + Y
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-SD 242
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHEN 1230
EL + TR L L RP+VEE EN
Sbjct: 243 ELNEIITRMLNL----KDYHRPSVEEILEN 268
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 207 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 303
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 231 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 290
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 291 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 346
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 347 TFSELVEH 354
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 202 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 298
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 226 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 285
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 286 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 341
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 342 TFSELVEH 349
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ + K K APE + + Q+DVWS GVL
Sbjct: 181 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 296
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 297 TFSELVEH 304
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ + K K APE + + Q+DVWS GVL
Sbjct: 181 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 296
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 297 TFSELVEH 304
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ + K K APE + + Q+DVWS GVL
Sbjct: 181 LSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 296
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 297 TFSELVEH 304
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + D GL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDRGLAR 173
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDRGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
D GL+R
Sbjct: 168 DRGLAR 173
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2
Length = 335
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Score = 38.1 bits (87), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 172 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 287
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 288 TFSELVEH 295
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin
At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin
At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin
At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
+G G G V A + +G A K ++ ++S+ EL ++ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
D S E + +++ L G L+++ + T+ + I Q+L GL Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L P +L V L + D GL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDGGLAR 173
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+ + +L GL+Y+H + H +++P N +A ++K++D G + T
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDGGLARHTDDEMTGY---- 182
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
G L+++ + T+ + I Q+L GL Y+H I H L P +L V L +
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKIL 167
Query: 525 DFGLSR 530
D GL+R
Sbjct: 168 DGGLAR 173
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 30/131 (22%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVV---------MASVRSVQ-------------- 986
YC+ +L L YL L H +++P+N++ + +VR V
Sbjct: 142 YCI-EILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200
Query: 987 VKLIDLGC-TQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSG 1045
+KLID GC T + G++I+ ++ APEV+ +D+WS G + L +G
Sbjct: 201 IKLIDFGCATFKSDYHGSIIN-----TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
Query: 1046 ASPFRGQSEPE 1056
+ FR E
Sbjct: 256 SLLFRTHEHME 266
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL--- 237
+ +A+ ++G G G V + + YA KV+ +Y K E DI+ ++
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQND 91
Query: 238 --CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSGL 293
+ N+V+ H + D +I E G L +TR +Y + DI Y ++L L
Sbjct: 92 DINNNNIVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKAL 150
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
+Y+ ++S+ H L P ++L+ P L+T RR+T K+
Sbjct: 151 NYLRKMSLTHTDLKPENILLDDPYFEKSLIT----VRRVTDGKKI 191
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 464 GGELLHSLTRQSY--YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
G L +TR +Y + DI Y ++L L+Y+ ++S+ H L P ++L+ P
Sbjct: 119 GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKS 178
Query: 522 LLTDFGLSRRITSFGKL 538
L+T RR+T K+
Sbjct: 179 LIT----VRRVTDGKKI 191
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein
Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human Protein
Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 134 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 185
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 90 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 149
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 150 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 178
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 178
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With The
Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2 Catalytic
Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2 Catalytic
Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein Kinase
Ck2 (c- Terminal Deletion Mutant 1-335) In Complex With
Two Sulfate Ions
Length = 334
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 134 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 185
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 90 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 149
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 150 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 178
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 178
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 133 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 184
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 89 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 148
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 149 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 177
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 127 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 177
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha Subunit
In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha Subunit
In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH------SLTRQSYYTEYDIAHYIRQLLSGLDYMHR 498
GP++ T D V + R P H RQ+ T+YDI Y+ ++L LDY H
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTL-TDYDIRFYMYEILKALDYCHS 149
Query: 499 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
+ I H + P ++++ H R L L D+GL+
Sbjct: 150 MGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 172 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 287
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 288 TFSELVEH 295
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A Pyridocarbazole
Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 153 LRGIASGMKYLSDMGFVHRDLAARNILI----NSNLVCKVSDFGLSR 195
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 213 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 135 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 159 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 183 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 242
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 243 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 298
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 299 TFSELVEH 306
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 181 LSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 296
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 297 TFSELVEH 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 296
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 297 TFSELVEH 304
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V+ + SG A K++ + K +N EL ++++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHECN 124
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L + E + ++ GL Y+
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ I H + P ++LV G + L DFG+S ++
Sbjct: 185 KHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQL 217
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+V+ GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 174 AVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDSMANSF 225
Query: 1012 --NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ +PE L Q+D+WS G+ + G P
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 943 PTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
P T +D + V G+++L R H ++ N++++ + VK+ D G + + K
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLS--ENNVVKICDFGLARDIYKN 252
Query: 1002 GTLIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
+ +T P ++ APE + ++ ++DVWS GVL + + S G SP+ G
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPG 304
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFKT-------------KEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS NV+ + G+ ++K K APE + ++ ++DVWS GVL
Sbjct: 232 LSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLL 291
Query: 1167 YVLLS-GASPFRGQSEPE---TRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S G SP+ G E +R EY E+ Q ++ + R P +RP
Sbjct: 292 WEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQ----IMLDCWHRDPKERP 347
Query: 1223 TVEECHEN 1230
E E
Sbjct: 348 RFAELVEK 355
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHR 240
D Y +LG G G VY A++ + A K + + + E+ ++ +L HR
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
N++ L +I E A +L + + + I ++ QL++G+++ H
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 301 IAHLGLTPGDLLVAHPGGRH---LLLTDFGLSRRITSFG 336
H L P +LL++ L + DFGL+R +FG
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR---AFG 188
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic
Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A Potent
Inhibitor
Length = 340
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
+ + +L L Y H G+ H +++P N VM +++LID G L HP
Sbjct: 140 FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 191
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
+ + F PE+L + ++ + D+WS G + ++ PF
Sbjct: 192 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
GP++ T D V + R P H + +Q Y T+YDI Y+ ++L LDY H +
Sbjct: 96 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 155
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
I H + P ++++ H R L L D+GL+
Sbjct: 156 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 184
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 134 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 184
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 153 LRGIASGMKYLSDMGAVHRDLAARNILI----NSNLVCKVSDFGLSR 195
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 213 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 124 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSR 166
Score = 31.2 bits (69), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 183
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 184 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 235
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 194 VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 277
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 278 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 333
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 334 TFSELVEH 341
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILL-SEKNV-VKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 237 WEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 292
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 293 TFSELVEH 300
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N+++ S ++V VK+ D G + + K + + P
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE + + Q+DVWS GVL + + S GASP+ G
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 1120 LSAKNVIGWSEKGIPSALFK-------------TKEQAPEVLAEEPIFPQTDVWSAGVLA 1166
LS KNV+ + G+ ++K K APE + + Q+DVWS GVL
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 1167 YVLLS-GASPFRGQS--EPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRP 1222
+ + S GASP+ G E R+ R R +Y E+ Q ++ + P +RP
Sbjct: 237 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----MLDCWHGEPSQRP 292
Query: 1223 TVEECHEN 1230
T E E+
Sbjct: 293 TFSELVEH 300
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 124 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSR 166
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 183
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 184 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 235
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 140
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 141 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSR 183
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 200
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 201 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 252
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSR 195
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 213 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H N+ N ++ + VK+ D G ++ +T H
Sbjct: 319 YMATQISSAMEYLEKKNFIHRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 376
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 377 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 419
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 434
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 435 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 468
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H N+ N ++ + VK+ D G ++ +T H
Sbjct: 322 YMATQISSAMEYLEKKNFIHRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 437
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 438 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 967 LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026
+ H +++P+N+++ + + +K++D G + +LG I+ + + +PEVL P
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSS---CQLGQRIYQ-XIQSRFYRSPEVLLGMPY 235
Query: 1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
D+WS G + + +G F G +E + +
Sbjct: 236 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNE-------LDIMN 235
D Y+ +G+G G V A +R A K++ K F N+ L++MN
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMN 108
Query: 236 QLCHRN-----LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIA---HYIR 287
+ H +V L + ++ ++ E+ L+ L R + + + + +
Sbjct: 109 K--HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN--LYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 288 QLLSGLDYMH--RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Q+ + L ++ LSI H L P ++L+ +P + + DFG S ++
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL 211
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSR 195
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 213 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 91 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 150
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
+R + SG+ Y+ + H L ++L+ ++DFGLSR
Sbjct: 151 LRGIASGMKYLSDMGYVHRDLAARNILIN--SNLVCKVSDFGLSR 193
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 210
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 211 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H N+ N ++ + VK+ D G ++ +T H
Sbjct: 361 YMATQISSAMEYLEKKNFIHRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 418
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 419 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 461
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 418 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 476
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 477 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSR 195
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 213 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSR 195
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 213 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V+ + SG A K++ + K +N EL ++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHECN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L + E + ++ GL Y+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ I H + P ++LV G + L DFG+S ++
Sbjct: 123 KHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQL 155
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+V+ GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDSMANSF 163
Query: 1012 --NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ +PE L Q+D+WS G+ + G P
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGLSR
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSR 195
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G ++ + T+ G +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI- 212
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 213 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 21/166 (12%)
Query: 187 FGDELGRGVTGIVYHAVERSSGR-----NYAAKVM--TGKGNQYKSLFKNELDIMNQLC- 238
FG LG G G V A G+ A K++ T ++ ++L +EL IM+ L
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM-SELKIMSHLGQ 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY----------YTEYDIAHYIRQ 288
H N+V L + +I+E G+LL+ L R++ D+ H+ Q
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ G+ ++ + H + ++L+ + G + DFGL+R I +
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMN 204
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ V G+ +L + H ++ NV++ + ++ D G + + I N
Sbjct: 159 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG--DFGLARDIMNDSNYIVKGNARL 216
Query: 1013 P-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE + + Q+DVWS G+L + + S G +P+ G
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+ ++NY + +A+ + W APE + + Q+DVWS
Sbjct: 195 DFGLARDIMNDSNYIVKGNARLPVKW--------------MAPESIFDCVYTVQSDVWSY 240
Query: 1163 GVLAYVLLS-GASPFRG 1178
G+L + + S G +P+ G
Sbjct: 241 GILLWEIFSLGLNPYPG 257
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 21/166 (12%)
Query: 187 FGDELGRGVTGIVYHAVERSSGR-----NYAAKVM--TGKGNQYKSLFKNELDIMNQLC- 238
FG LG G G V A G+ A K++ T ++ ++L +EL IM+ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM-SELKIMSHLGQ 108
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY----------YTEYDIAHYIRQ 288
H N+V L + +I+E G+LL+ L R++ D+ H+ Q
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ G+ ++ + H + ++L+ + G + DFGL+R I +
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMN 212
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ V G+ +L + H ++ NV++ + K+ D G + + I N
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYIVKGNARL 224
Query: 1013 P-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE + + Q+DVWS G+L + + S G +P+ G
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+ ++NY + +A+ + W APE + + Q+DVWS
Sbjct: 203 DFGLARDIMNDSNYIVKGNARLPVKW--------------MAPESIFDCVYTVQSDVWSY 248
Query: 1163 GVLAYVLLS-GASPFRG 1178
G+L + + S G +P+ G
Sbjct: 249 GILLWEIFSLGLNPYPG 265
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 967 LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026
+ H +++P+N+++ + + +K++D G + +LG I+ + + +PEVL P
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSS---CQLGQRIYQ-XIQSRFYRSPEVLLGMPY 235
Query: 1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
D+WS G + + +G F G +E + +
Sbjct: 236 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNE-------LDIMN 235
D Y+ +G+G G V A +R A K++ K F N+ L++MN
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMN 108
Query: 236 QLCHRN-----LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIA---HYIR 287
+ H +V L + ++ ++ E+ L+ L R + + + + +
Sbjct: 109 K--HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN--LYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 288 QLLSGLDYMH--RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Q+ + L ++ LSI H L P ++L+ +P + + DFG S ++
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211
>pdb|2WWK|O Chain O, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig F17r
Mutant Complex
Length = 109
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
G P F +P + VV G + E+KC+ +GEP PV+ W K G
Sbjct: 12 GSPPCFLRRPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGG 52
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 967 LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026
+ H +++P+N+++ + + +K++D G + +LG I+ + + +PEVL P
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSS---CQLGQRIYQ-XIQSRFYRSPEVLLGMPY 216
Query: 1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
D+WS G + + +G F G +E + +
Sbjct: 217 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 251
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNE-------LDIMN 235
D Y+ +G+G G V A +R A K++ K F N+ L++MN
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMN 89
Query: 236 QLCHRN-----LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIA---HYIR 287
+ H +V L + ++ ++ E+ L+ L R + + + + +
Sbjct: 90 K--HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN--LYDLLRNTNFRGVSLNLTRKFAQ 145
Query: 288 QLLSGLDYMH--RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Q+ + L ++ LSI H L P ++L+ +P + + DFG S ++
Sbjct: 146 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 192
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 72/185 (38%), Gaps = 26/185 (14%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLF-----KNELDIMNQ 236
T Y+ E+G G G VY A + SG A K + E+ ++ +
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 237 LC---HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-----------I 282
L H N+VRL D T + I L+ Q T D I
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKV-----TLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
+RQ L GLD++H I H L P ++LV G + L DFGL+R + L P+
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKLADFGLARIYSYQMALTPVV 180
Query: 343 YDVRY 347
+ Y
Sbjct: 181 VTLWY 185
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 16/92 (17%)
Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
D++T+ D P G E + L +RQ L GLD++H I H L P
Sbjct: 104 DLRTYLDKAPPPGLPAETIKDL--------------MRQFLRGLDFLHANCIVHRDLKPE 149
Query: 510 DLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 541
++LV G + L DFGL+R + L P+
Sbjct: 150 NILVT--SGGTVKLADFGLARIYSYQMALTPV 179
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L GL +LH + H +++P+N+++ S VKL D G R+ + P+ +
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLA-RIYSYQMALTPVVV-TLWY 185
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
APEVL + D+WS G + + F G SE
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 224
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V+ + SG A K++ + K +N EL ++++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHECN 89
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L + E + ++ GL Y+
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ I H + P ++LV G + L DFG+S ++
Sbjct: 150 KHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQL 182
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+V+ GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 139 AVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDSMANSF 190
Query: 1012 --NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ +PE L Q+D+WS G+ + G P
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-TLIHPINTPNPEFA 1016
GL YLH R + H +++ N+++ + K+ D G +++ T+LG T + + +
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLD--ENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
PE + + ++DV+S GV+ + +L S QS P R+ VN + E
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV-QSLP--REMVNLAEWAVE 258
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNY----AAKVMT-GKGNQYKSLFKNELDIMNQLCHRNLVRL 245
LG G G VY + G A K++ G + F +E IM + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ + ++++L G LL + + + ++ Q+ G+ Y+ + H
Sbjct: 83 LGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 141
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L ++LV P H+ +TDFGL+R +
Sbjct: 142 DLAARNVLVKSPN--HVKITDFGLARLL 167
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ S VK+ D G + + +
Sbjct: 122 WCV-QIAKGMMYLEERRLVHRDLAARNVLVKSPN--HVKITDFGLARLLEGDEKEYNADG 178
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G P+ G
Sbjct: 179 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 222
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
+ ++ Q+ G+ Y+ + H L ++LV P H+ +TDFGL+R +
Sbjct: 119 LLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN--HVKITDFGLARLL 167
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDX 212
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDY 212
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
+ N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 YKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V+ + SG A K++ + K +N EL ++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHECN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L + E + ++ GL Y+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
+ I H + P ++LV G + L DFG+S ++
Sbjct: 123 KHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI 156
Score = 30.0 bits (66), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 953 TSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
+V+ GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDSMANS 162
Query: 1012 ---NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ +PE L Q+D+WS G+ + G P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V+ + SG A K++ + K +N EL ++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHECN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L + E + ++ GL Y+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ I H + P ++LV G + L DFG+S ++
Sbjct: 123 KHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQL 155
Score = 30.0 bits (66), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+V+ GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDSMANSF 163
Query: 1012 --NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ +PE L Q+D+WS G+ + G P
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V+ + SG A K++ + K +N EL ++++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHECN 65
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L + E + ++ GL Y+
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
+ I H + P ++LV G + L DFG+S ++
Sbjct: 126 KHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI 159
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 953 TSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-- 1009
+V+ GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 114 IAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDEMANE 165
Query: 1010 -TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
+ +PE L Q+D+WS G+ + G P
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDX 212
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
PT + + DG+ YL+ + H N+ N ++A VK+ D G T+ +
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVA--HDFTVKIGDFGMTRDIYETD 185
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQSEP 1055
K G + P+ + APE L + +D+WS GV+ + + S A P++G S
Sbjct: 186 YYRKGGKGLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
Query: 1056 ETRQNV 1061
+ + V
Sbjct: 241 QVLKFV 246
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSL-----FKNELDIMNQLCHRNLV 243
ELG+G G+VY R + A +V N+ SL F NE +M ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 244 RLHDSYETKDSFTIISELAGGGEL---LHSLTRQSYY-------TEYDIAHYIRQLLSGL 293
RL ++ EL G+L L SL ++ T ++ ++ G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y++ H L + +VAH + + DFG++R I
Sbjct: 145 AYLNAKKFVHRNLAARNCMVAH--DFTVKIGDFGMTRDI 181
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+++G+ + H + H +I+P+N++++ +S VKL D G + + G ++
Sbjct: 133 IINGIGFCHSHNIIHRDIKPENILVS--QSGVVKLCDFGFARTLAAPGE-VYDDEVATRW 189
Query: 1015 FAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
+ APE+L + + + DVW+ G L + G F G S+
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD--TLHQVNT-EFDNLRSLRH 652
+KY+ + + G + +V+K K +T +VA K F S D + ++ E L+ LRH
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNK-DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 653 ERIASLLEAYK 663
E + +LLE K
Sbjct: 84 ENLVNLLEVCK 94
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH----------- 239
LG+G G V A R YA K + + ++ +E+ ++ L H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-SEVMLLASLNHQYVVRYYAAWL 72
Query: 240 --RNLVRLHDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
RN V+ + + K + I E G +L+HS EY RQ+L L
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY--WRLFRQILEALS 130
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y+H I H L P ++ + R++ + DFGL++ +
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDE--SRNVKIGDFGLAKNV 166
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 466 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD 525
+L+HS EY RQ+L L Y+H I H L P ++ + R++ + D
Sbjct: 104 DLIHSENLNQQRDEY--WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE--SRNVKIGD 159
Query: 526 FGLSRRI 532
FGL++ +
Sbjct: 160 FGLAKNV 166
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNY----AAKVMT-GKGNQYKSLFKNELDIMNQLCHRNLVRL 245
LG G G VY + G A K++ G + F +E IM + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ + ++++L G LL + + + ++ Q+ G+ Y+ + H
Sbjct: 106 LGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 164
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
L ++LV P H+ +TDFGL+R
Sbjct: 165 DLAARNVLVKSP--NHVKITDFGLAR 188
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ S VK+ D G + + +
Sbjct: 145 WCV-QIAKGMMYLEERRLVHRDLAARNVLVKSPN--HVKITDFGLARLLEGDEKEYNADG 201
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G P+ G
Sbjct: 202 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 245
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
+ ++ Q+ G+ Y+ + H L ++LV P H+ +TDFGL+R
Sbjct: 142 LLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP--NHVKITDFGLAR 188
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
PT + + DG+ YL+ + H N+ N ++A VK+ D G T+ +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVA--HDFTVKIGDFGMTRDIYETD 184
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQSEP 1055
K G + P+ + APE L + +D+WS GV+ + + S A P++G S
Sbjct: 185 YYRKGGKGLLPV-----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 1056 ETRQNV 1061
+ + V
Sbjct: 240 QVLKFV 245
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSL-----FKNELDIMNQLCHRNLV 243
ELG+G G+VY R + A +V N+ SL F NE +M ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 244 RLHDSYETKDSFTIISELAGGGEL---LHSLTRQSYY-------TEYDIAHYIRQLLSGL 293
RL ++ EL G+L L SL ++ T ++ ++ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y++ H L + +VAH + + DFG++R I
Sbjct: 144 AYLNAKKFVHRNLAARNCMVAH--DFTVKIGDFGMTRDI 180
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGL+R
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLAR 195
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKLGTLI 1005
+ G++YL G H ++ N+++ S ++ K+ D G + + T+ G +
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLARVLEDDPEAAYTTRGGKI- 212
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PI + +PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 213 -PI-----RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 17/156 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
LG+G G V A R YA K + + ++ +E+ ++ L H+ +VR + ++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-SEVMLLASLNHQYVVRYYAAWL 72
Query: 251 TKDSFTI-ISELAGGGELLHSLTRQSYYTEYDIAH-------------YIRQLLSGLDYM 296
+ +F ++ + L + T YD+ H RQ+L L Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
H I H L P ++ + R++ + DFGL++ +
Sbjct: 133 HSQGIIHRDLKPMNIFIDE--SRNVKIGDFGLAKNV 166
Score = 33.5 bits (75), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 466 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD 525
+L+HS EY RQ+L L Y+H I H L P ++ + R++ + D
Sbjct: 104 DLIHSENLNQQRDEY--WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE--SRNVKIGD 159
Query: 526 FGLSRRI 532
FGL++ +
Sbjct: 160 FGLAKNV 166
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDY 212
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDY 212
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDY 212
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDY 212
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDY 212
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
C V G++YL + H ++ NV++ + K+ D G + + + N
Sbjct: 144 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIADFGLARDIHHIDYYKKTTNG 201
Query: 1011 PNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 244
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 205 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 244
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 1110 LKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVL 1169
L RE + T ++SA W APEV+ +DVWS GVL + L
Sbjct: 162 LAREWHRTTKMSAAGAYAW--------------MAPEVIRASMFSKGSDVWSYGVLLWEL 207
Query: 1170 LSGASPFRG 1178
L+G PFRG
Sbjct: 208 LTGEVPFRG 216
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 958 GLQYLHWRGLC---HLNIEPDNVVM------ASVRSVQVKLIDLGCTQ---RVTKLGTLI 1005
G+ YLH + H +++ N+++ + + +K+ D G + R TK+
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-- 174
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
+ APEV+ +DVWS GVL + LL+G PFRG
Sbjct: 175 ----AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 228 KNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIR 287
+ E + L H N++ L + + ++ E A GG L L+ + + + ++
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI-LVNWAV 112
Query: 288 QLLSGLDYMHR---LSIAHLGLTPGDLLVAHP------GGRHLLLTDFGLSR 330
Q+ G++Y+H + I H L ++L+ + L +TDFGL+R
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 23/159 (14%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
LG+G G V A R YA K + + ++ +E+ ++ L H+ +VR + ++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-SEVXLLASLNHQYVVRYYAAWL 72
Query: 251 TKDSFTIISELAGGGELLHSLTRQSYYTE----YDIAH-------------YIRQLLSGL 293
+ +F + + +L Q Y E YD+ H RQ+L L
Sbjct: 73 ERRNFV---KPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y+H I H L P ++ + R++ + DFGL++ +
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDE--SRNVKIGDFGLAKNV 166
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV 998
+L+ L Y+H +G+ H N++P N+ + R+V++ D G + V
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIG--DFGLAKNV 166
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 466 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD 525
+L+HS EY RQ+L L Y+H I H L P ++ + R++ + D
Sbjct: 104 DLIHSENLNQQRDEY--WRLFRQILEALSYIHSQGIIHRNLKPXNIFIDE--SRNVKIGD 159
Query: 526 FGLSRRI 532
FGL++ +
Sbjct: 160 FGLAKNV 166
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDY 201
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 202 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 251
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 212 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 251
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDY 204
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 205 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 254
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 215 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 254
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT----QR 997
+P K A+ + LD L H + H +++P+N+++ +K+ID G + QR
Sbjct: 199 LPLVRKFAHSILQCLDAL---HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255
Query: 998 VTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
V T I + + APEV+ D+WS G + LL+G G+ E
Sbjct: 256 VY---TXIQ-----SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR---- 240
Y+ +G+G G V A + ++ A K++ + ++ E+ I+ L +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDN 157
Query: 241 --NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDY 295
N++ + +++ ++ + EL L+ L +++ + + + + +L LD
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMN--LYELIKKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+H+ I H L P ++L+ G + + DFG S
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 30.0 bits (66), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 468 LHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
L+ L +++ + + + + +L LD +H+ I H L P ++L+ G + +
Sbjct: 185 LYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVI 244
Query: 525 DFGLS 529
DFG S
Sbjct: 245 DFGSS 249
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT----QR 997
+P K A+ + LD L H + H +++P+N+++ +K+ID G + QR
Sbjct: 199 LPLVRKFAHSILQCLDAL---HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255
Query: 998 VTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
V T I + + APEV+ D+WS G + LL+G G+ E
Sbjct: 256 VY---TXIQ-----SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
Score = 33.5 bits (75), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
Y+ +G+G G V A + ++ A K++ + ++ E+ I+ L ++
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDN 157
Query: 245 LHDSYETKDSFTIISELAGGGELL----HSLTRQSYYTEYD---IAHYIRQLLSGLDYMH 297
+ ++FT + + ELL + L +++ + + + + +L LD +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ I H L P ++L+ G + + DFG S
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 468 LHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
L+ L +++ + + + + +L LD +H+ I H L P ++L+ G + +
Sbjct: 185 LYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVI 244
Query: 525 DFGLS 529
DFG S
Sbjct: 245 DFGSS 249
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T T P
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTG-DTYTAPAG 173
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 232
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 233 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHY 285
F E IM Q H N++RL I++E G L L + + +T +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
+R + SG+ Y+ + H L ++L+ +L+ ++DFGL R
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLGR 195
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
C V G++YL + H ++ NV++ + K+ D G + + + N
Sbjct: 147 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIADFGLARDIHHIDYYKKTTNG 204
Query: 1011 PNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 247
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 208 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 247
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTE--NNVMKIADFGLARDINNIDY 199
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 200 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 249
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 210 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 249
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
C V G++YL + H ++ NV++ + K+ D G + + + N
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIADFGLARDIHHIDYYKKTTNG 212
Query: 1011 PNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V R SG A K++ + K +N EL ++++
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIH---LEIKPAIRNQIIRELQVLHECN 72
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L E + +L GL Y+
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ I H + P ++LV G + L DFG+S ++
Sbjct: 133 KHQIMHRDVKPSNILVNSRG--EIKLCDFGVSGQL 165
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+VL GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDSMANSF 173
Query: 1012 --NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ APE L Q+D+WS G+ L G P
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
C V G++YL + H ++ NV++ + K+ D G + + + N
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIADFGLARDIHHIDXXKKTTNG 212
Query: 1011 PNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
C V G++YL + H ++ NV++ + K+ D G + + + N
Sbjct: 148 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIADFGLARDIHHIDYYKKTTNG 205
Query: 1011 PNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 248
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 209 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 248
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T T P
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTG-DTYTAPAG 172
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 231
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 232 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 31/204 (15%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ 236
R++ D + G+G G V E+S+G + A K K Q EL IM
Sbjct: 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK----KVIQDPRFRNRELQIMQD 72
Query: 237 LC---HRNLVRLHDSYET------KDSF-TIISELAGGGELLHSLTRQSYYTEYD----- 281
L H N+V+L + T +D + ++ E + LH R Y +
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV--PDTLHRCCRNYYRRQVAPPPIL 130
Query: 282 IAHYIRQLLSGLDYMH--RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
I ++ QL+ + +H +++ H + P ++LV G L L DFG S KL+
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT-LKLCDFG------SAKKLS 183
Query: 340 PLEYDVRYV-RQALRHPWLNFADR 362
P E +V Y+ + R P L F ++
Sbjct: 184 PSEPNVAYICSRYYRAPELIFGNQ 207
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFA- 1016
G +L +CH +I+P NV++ +KL D G ++++ + PN +
Sbjct: 143 GCLHLPSVNVCHRDIKPHNVLVNEADGT-LKLCDFGSAKKLSP--------SEPNVAYIC 193
Query: 1017 -----APE-VLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
APE + + D+WS G + ++ G FRG
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
C V G++YL + H ++ NV++ + K+ D G + + + N
Sbjct: 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIADFGLARDIHHIDYYKKTTNG 253
Query: 1011 PNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 257 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 942 IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT----QR 997
+P K A+ + LD L H + H +++P+N+++ +K+ID G + QR
Sbjct: 199 LPLVRKFAHSILQCLDAL---HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255
Query: 998 VTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
V + + APEV+ D+WS G + LL+G G+ E
Sbjct: 256 VYX--------XIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR---- 240
Y+ +G+G G V A + ++ A K++ + ++ E+ I+ L +
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDN 157
Query: 241 --NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDY 295
N++ + +++ ++ + EL L+ L +++ + + + + +L LD
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMN--LYELIKKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+H+ I H L P ++L+ G + + DFG S
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 30.0 bits (66), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 468 LHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
L+ L +++ + + + + +L LD +H+ I H L P ++L+ G + +
Sbjct: 185 LYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVI 244
Query: 525 DFGLS 529
DFG S
Sbjct: 245 DFGSS 249
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ + +K+ D G + + +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDY 258
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 308
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 269 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 308
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
C V G++YL + H ++ NV++ + K+ D G + + + N
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIADFGLARDIHHIDYYKKTTNG 212
Query: 1011 PNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI--NTP 1011
+ +G+ YLH + H N+ NV++ + R V++ D G + V + G + + +
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIG--DFGLAKAVPE-GHEYYRVREDGD 181
Query: 1012 NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E + +DVWS GV Y LL+
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 940 IVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT 999
IVI H Y + +L GL LH G+ H ++ P N+++A + + + D + T
Sbjct: 129 IVISPQHIQ-YFMYHILLGLHVLHEAGVVHRDLHPGNILLAD--NNDITICDFNLAREDT 185
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQS 1053
H + + + APE++ + F + D+WSAG + + + + FRG +
Sbjct: 186 ADANKTHYVT--HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238
Score = 36.6 bits (83), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 110/288 (38%), Gaps = 49/288 (17%)
Query: 230 ELDIMNQLCHRNLVRLHDSY-----ETKDSFTIISEL--AGGGELLHSLTRQSYYTEYDI 282
E+ ++N H N++ L D + +++EL +++H ++ + I
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD--QRIVISPQHI 136
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
+++ +L GL +H + H L PG++L+A + + DF L+R T+ N
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLA--DNNDITICDFNLAREDTA--DANKTH 192
Query: 343 YDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPL- 401
Y + H W P+L + + L W + + R+ L
Sbjct: 193 Y--------VTHRWYR---------APELVMQ-FKGFTKLVDMWSAGCVMAEMFNRKALF 234
Query: 402 --NSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRD-VKTWEDNVPNRGPDVKTWEDNV 458
++ Y ++++ G TP+ + S RD ++ NVP R W V
Sbjct: 235 RGSTFYNQLNKIVEVVG---TPKIEDVVMFSSPSARDYLRNSLSNVPARA-----WTAVV 286
Query: 459 PNRGPG-----GELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLS 500
P P ++L ++ TE + H Y L LD LS
Sbjct: 287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLS 334
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
I +++ +L GL +H + H L PG++L+A + + DF L+R T+
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA--DNNDITICDFNLAREDTA 186
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 940 IVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT 999
IVI H Y + +L GL LH G+ H ++ P N+++A + + + D + T
Sbjct: 129 IVISPQHIQ-YFMYHILLGLHVLHEAGVVHRDLHPGNILLAD--NNDITICDFNLAREDT 185
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQS 1053
H + + + APE++ + F + D+WSAG + + + + FRG +
Sbjct: 186 ADANKTHYVT--HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238
Score = 36.6 bits (83), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 110/288 (38%), Gaps = 49/288 (17%)
Query: 230 ELDIMNQLCHRNLVRLHDSY-----ETKDSFTIISEL--AGGGELLHSLTRQSYYTEYDI 282
E+ ++N H N++ L D + +++EL +++H ++ + I
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD--QRIVISPQHI 136
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
+++ +L GL +H + H L PG++L+A + + DF L+R T+ N
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLA--DNNDITICDFNLAREDTA--DANKTH 192
Query: 343 YDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPL- 401
Y + H W P+L + + L W + + R+ L
Sbjct: 193 Y--------VTHRWYR---------APELVMQ-FKGFTKLVDMWSAGCVMAEMFNRKALF 234
Query: 402 --NSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRD-VKTWEDNVPNRGPDVKTWEDNV 458
++ Y ++++ G TP+ + S RD ++ NVP R W V
Sbjct: 235 RGSTFYNQLNKIVEVVG---TPKIEDVVMFSSPSARDYLRNSLSNVPARA-----WTAVV 286
Query: 459 PNRGPG-----GELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLS 500
P P ++L ++ TE + H Y L LD LS
Sbjct: 287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLS 334
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
I +++ +L GL +H + H L PG++L+A + + DF L+R T+
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA--DNNDITICDFNLAREDTA 186
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 936 CYLPIVIP---TTHKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID 991
CY P P + KD C V G++YL + H ++ NV++ + K+ D
Sbjct: 121 CYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIAD 178
Query: 992 LGCTQRVTKLGTLIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPF 1049
G + + + N P ++ APE L + Q+DVWS GVL + + + G SP+
Sbjct: 179 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
Query: 1050 RG 1051
G
Sbjct: 239 PG 240
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 240
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI--NTP 1011
+ +G+ YLH + H N+ NV++ + R VK+ D G + V + G + + +
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDR--LVKIGDFGLAKAVPE-GHEYYRVREDGD 181
Query: 1012 NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E + +DVWS GV Y LL+
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
C V G++YL + H ++ NV++ + K+ D G + + + N
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIADFGLARDIHHIDYYKKTTNG 212
Query: 1011 PNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 945 THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T KD C + G++YL + H ++ NV++ +++ D G + + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIA--DFGLARDINNIDY 212
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
N P ++ APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 1140 TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1178
K APE L + Q+DVWS GVL + + + G SP+ G
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
Score = 33.5 bits (75), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G +P + YR
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDPSQVYELLEKDYR 228
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 229 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 191 LGRGVTGIVYHAVERSSGRNY----AAKVMTGKGNQYKSLFKNELD---IMNQLCHRNLV 243
LG G G VY + G N A KV+ + N K LD +M + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVL--RENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 244 RLHDSYETKDSFTIISELAGGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
RL T + ++++L G LL H + D+ ++ Q+ G+ Y+ + +
Sbjct: 83 RLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLV 141
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
H L ++LV P H+ +TDFGL+R
Sbjct: 142 HRDLAARNVLVKSPN--HVKITDFGLAR 167
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 463 PGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
P G LL H + D+ ++ Q+ G+ Y+ + + H L ++LV P H+
Sbjct: 101 PYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPN--HV 158
Query: 522 LLTDFGLSR 530
+TDFGL+R
Sbjct: 159 KITDFGLAR 167
Score = 33.5 bits (75), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+C+ + G+ YL L H ++ NV++ S VK+ D G + + T H
Sbjct: 124 WCM-QIAKGMSYLEDVRLVHRDLAARNVLVKSPN--HVKITDFGLARLLDIDETEYHADG 180
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ GA P+ G
Sbjct: 181 GKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|2WP3|O Chain O, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig
Complex
pdb|2WWM|C Chain C, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig
Complex In Space Group P1
pdb|2WWM|O Chain O, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig
Complex In Space Group P1
Length = 109
Score = 40.0 bits (92), Expect = 0.008, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
G P F P + VV G + E+KC+ +GEP PV+ W K G
Sbjct: 12 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGG 52
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT--- 999
PT + + DG+ YL+ + H ++ N ++A VK+ D G T+ +
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETD 181
Query: 1000 ---KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQSEP 1055
K G + P+ + APE L + +D+WS GV+ + + S A P++G S
Sbjct: 182 XXRKGGKGLLPVR-----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-- 234
Query: 1056 ETRQNVNFV 1064
Q + FV
Sbjct: 235 -NEQVLKFV 242
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSL-----FKNELDIMNQLCHRNLV 243
ELG+G G+VY R + A +V N+ SL F NE +M ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 244 RLHDSYETKDSFTIISELAGGGEL---LHSLTRQSYY-------TEYDIAHYIRQLLSGL 293
RL ++ EL G+L L SL ++ T ++ ++ G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y++ H L + +VAH + + DFG++R I
Sbjct: 141 AYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDI 177
>pdb|3KNB|B Chain B, Crystal Structure Of The Titin C-Terminus In Complex With
Obscurin- Like 1
Length = 107
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
G P F P + VV G + E+KC+ +GEP PV+ W K G
Sbjct: 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGG 51
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRY 1193
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + Y
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDY 230
Query: 1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
R E + ++ + ++ P RP+ E H+
Sbjct: 231 RMERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
PT + + DG+ YL+ + H ++ N ++A VK+ D G T+ +
Sbjct: 126 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETD 183
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQSEP 1055
K G + P+ + APE L + +D+WS GV+ + + S A P++G S
Sbjct: 184 YYRKGGKGLLPVR-----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-- 236
Query: 1056 ETRQNVNFV 1064
Q + FV
Sbjct: 237 -NEQVLKFV 244
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSL-----FKNELDIMNQLCHRNLV 243
ELG+G G+VY R + A +V N+ SL F NE +M ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 244 RLHDSYETKDSFTIISELAGGGEL---LHSLTRQSYY-------TEYDIAHYIRQLLSGL 293
RL ++ EL G+L L SL ++ T ++ ++ G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y++ H L + +VAH + + DFG++R I
Sbjct: 143 AYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDI 179
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT--- 999
PT + + DG+ YL+ + H ++ N ++A VK+ D G T+ +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETD 184
Query: 1000 ---KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQSEP 1055
K G + P+ + APE L + +D+WS GV+ + + S A P++G S
Sbjct: 185 XXRKGGKGLLPVR-----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-- 237
Query: 1056 ETRQNVNFV 1064
Q + FV
Sbjct: 238 -NEQVLKFV 245
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSL-----FKNELDIMNQLCHRNLV 243
ELG+G G+VY R + A +V N+ SL F NE +M ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 244 RLHDSYETKDSFTIISELAGGGEL---LHSLTRQSYY-------TEYDIAHYIRQLLSGL 293
RL ++ EL G+L L SL ++ T ++ ++ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y++ H L + +VAH + + DFG++R I
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDI 180
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRY 1193
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + Y
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDY 229
Query: 1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
R E + ++ + ++ P RP+ E H+
Sbjct: 230 RMERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 230
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 231 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 235
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 236 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 232
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 233 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT--- 999
PT + + DG+ YL+ + H ++ N ++A VK+ D G T+ +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETD 184
Query: 1000 ---KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQSEP 1055
K G + P+ + APE L + +D+WS GV+ + + S A P++G S
Sbjct: 185 XXRKGGKGLLPVR-----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-- 237
Query: 1056 ETRQNVNFV 1064
Q + FV
Sbjct: 238 -NEQVLKFV 245
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSL-----FKNELDIMNQLCHRNLV 243
ELG+G G+VY R + A +V N+ SL F NE +M ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 244 RLHDSYETKDSFTIISELAGGGEL---LHSLTRQSYY-------TEYDIAHYIRQLLSGL 293
RL ++ EL G+L L SL ++ T ++ ++ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y++ H L + +VAH + + DFG++R I
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDI 180
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 128 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 185
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 186 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 228
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 185 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 243
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 244 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 277
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 235
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 236 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G +P + YR
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDPSQVYELLEKDYR 228
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 229 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRY 1193
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + Y
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDY 231
Query: 1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
R E + ++ + ++ P RP+ E H+
Sbjct: 232 RMERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 113 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTFTAHAGA 170
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRY 1193
A F K APE LA ++DVW+ GVL + + + G SP+ G +P + Y
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDPSQVYELLEKDY 227
Query: 1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
R E + ++ + ++ P RP+ E H+
Sbjct: 228 RMERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
PT + + DG+ YL+ + H ++ N ++A VK+ D G T+ +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETD 184
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQSEP 1055
K G + P+ + APE L + +D+WS GV+ + + S A P++G S
Sbjct: 185 YYRKGGKGLLPVR-----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 1056 ETRQNV 1061
+ + V
Sbjct: 240 QVLKFV 245
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSL-----FKNELDIMNQLCHRNLV 243
ELG+G G+VY R + A +V N+ SL F NE +M ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 244 RLHDSYETKDSFTIISELAGGGEL---LHSLTRQSYY-------TEYDIAHYIRQLLSGL 293
RL ++ EL G+L L SL ++ T ++ ++ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y++ H L + +VAH + + DFG++R I
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDI 180
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
PT + + DG+ YL+ + H ++ N ++A VK+ D G T+ +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETA 184
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQSEP 1055
K G + P+ + APE L + +D+WS GV+ + + S A P++G S
Sbjct: 185 YYRKGGKGLLPVR-----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 1056 ETRQNV 1061
+ + V
Sbjct: 240 QVLKFV 245
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSL-----FKNELDIMNQLCHRNLV 243
ELG+G G+VY R + A +V N+ SL F NE +M ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 244 RLHDSYETKDSFTIISELAGGGEL---LHSLTRQSYY-------TEYDIAHYIRQLLSGL 293
RL ++ EL G+L L SL ++ T ++ ++ G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
Y++ H L + +VAH + + DFG++R I
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDI 180
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 230
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 231 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 235
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 236 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 230
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 231 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H N+ N++++ ++ K+ D G + +
Sbjct: 103 TINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSD--TLSCKIADFGLARLIEDNEY 160
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 161 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215
Query: 1058 RQNV 1061
QN+
Sbjct: 216 IQNL 219
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 165 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 224
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 225 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 254
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 119 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 176
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 219
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRY 1193
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + Y
Sbjct: 175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDY 233
Query: 1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
R E + ++ + ++ P RP+ E H+
Sbjct: 234 RMERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V+ + SG A K++ + K +N EL ++++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHECN 81
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L + E + ++ GL Y+
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ I H + P ++LV G + L DFG+S ++
Sbjct: 142 KHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQL 174
Score = 33.1 bits (74), Expect = 0.96, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+V+ GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 131 AVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDSMANSF 182
Query: 1012 --NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
+ +PE L Q+D+WS G+ + G P
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 235
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 236 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V+ + SG A K++ + K +N EL ++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHECN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L + E + ++ GL Y+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ I H + P ++LV G + L DFG+S ++
Sbjct: 123 KHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQL 155
Score = 33.1 bits (74), Expect = 0.96, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+V+ GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDSMANSF 163
Query: 1012 --NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
+ +PE L Q+D+WS G+ + G P
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
D ++ ELG G G+V+ + SG A K++ + K +N EL ++++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIRNQIIRELQVLHECN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM-H 297
+V + ++ + +I E GG L L + E + ++ GL Y+
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ I H + P ++LV G + L DFG+S ++
Sbjct: 123 KHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQL 155
Score = 33.1 bits (74), Expect = 0.96, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 954 SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+V+ GL YL + + H +++P N+++ S ++KL D G + G LI +
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVS------GQLIDSMANSF 163
Query: 1012 --NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
+ +PE L Q+D+WS G+ + G P
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 230
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 231 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + YR
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR 235
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
E + ++ + ++ P RP+ E H+
Sbjct: 236 MERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 24/137 (17%)
Query: 937 YLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMA---------------- 980
YLP I H+ + + +++LH L H +++P+N++
Sbjct: 131 YLPYPI---HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDE 187
Query: 981 -SVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLA 1039
SV+S V+++D G H + APEV+ E DVWS G +
Sbjct: 188 RSVKSTAVRVVDFGSA----TFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCII 243
Query: 1040 YVLLSGASPFRGQSEPE 1056
+ G + F+ E
Sbjct: 244 FEYYVGFTLFQTHDNRE 260
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 9/142 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
+ + Y+ LG G G V V+ G A + +YK + E++++ ++ +
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEK 90
Query: 241 N------LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSG 292
+ V++ D ++ I EL G L +Y Y + + H QL
Sbjct: 91 DPDNKNLCVQMFDWFDYHGHMCISFELLGLS-TFDFLKDNNYLPYPIHQVRHMAFQLCQA 149
Query: 293 LDYMHRLSIAHLGLTPGDLLVA 314
+ ++H + H L P ++L
Sbjct: 150 VKFLHDNKLTHTDLKPENILFV 171
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ + VK+ D G ++ +T H
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRY 1193
A F K APE LA ++DVW+ GVL + + + G SP+ G + + + Y
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDY 229
Query: 1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
R E + ++ + ++ P RP+ E H+
Sbjct: 230 RMERP-EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 239 HRNLVRLHDSYETKDSFTIIS-ELAGGGELLHSLTRQSYYT--------EYDIAHYIRQL 289
H N++R + S ET D F I+ EL L L + EY+ +RQ+
Sbjct: 86 HPNVIRYYCS-ETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVA---------HPGGRHL--LLTDFGLSRRITS 334
SG+ ++H L I H L P ++LV+ G +L L++DFGL +++ S
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA---------HPGGRHL--LLTDFG 527
EY+ +RQ+ SG+ ++H L I H L P ++LV+ G +L L++DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 528 LSRRITS 534
L +++ S
Sbjct: 192 LCKKLDS 198
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMAS-----------VRSVQVKLIDLGCTQRVTKLGT 1003
+ G+ +LH + H +++P N+++++ ++++ + D G +++ G
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQ 200
Query: 1004 LIHPINTPNPE----FAAPEVLAEEP---IFPQTDVWSAGVLAYVLLS-GASPF 1049
N NP + APE+L E + D++S G + Y +LS G PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRN---YAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+G G +G V + R G+ A K + G + + F +E IM Q H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
I++E G L L T +T + +R + +G+ Y+ L H
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRD 176
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
L ++LV ++DFGLSR
Sbjct: 177 LAARNVLV--DSNLVCKVSDFGLSR 199
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV--------TKLGTLIHPIN 1009
G++YL G H ++ NV++ S ++ K+ D G ++ + T G I PI
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDS--NLVCKVSDFGLSRVLEDDPDAAXTTTGGKI-PIR 219
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAY-VLLSGASPF 1049
+ APE +A +DVWS GV+ + VL G P+
Sbjct: 220 -----WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 239 HRNLVRLHDSYETKDSFTIIS-ELAGGGELLHSLTRQSYYT--------EYDIAHYIRQL 289
H N++R + S ET D F I+ EL L L + EY+ +RQ+
Sbjct: 68 HPNVIRYYCS-ETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVA---------HPGGRHL--LLTDFGLSRRITS 334
SG+ ++H L I H L P ++LV+ G +L L++DFGL +++ S
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA---------HPGGRHL--LLTDFG 527
EY+ +RQ+ SG+ ++H L I H L P ++LV+ G +L L++DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 528 LSRRITS 534
L +++ S
Sbjct: 174 LCKKLDS 180
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMAS-----------VRSVQVKLIDLGCTQRVTKLGT 1003
+ G+ +LH + H +++P N+++++ ++++ + D G +++ G
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQ 182
Query: 1004 LIHPINTPNPE----FAAPEVLAEEP-------IFPQTDVWSAGVLAYVLLS-GASPF 1049
N NP + APE+L E + D++S G + Y +LS G PF
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 239 HRNLVRLHDSYETKDSFTIIS-ELAGGGELLHSLTRQSYYT--------EYDIAHYIRQL 289
H N++R + S ET D F I+ EL L L + EY+ +RQ+
Sbjct: 68 HPNVIRYYCS-ETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVA---------HPGGRHL--LLTDFGLSRRITS 334
SG+ ++H L I H L P ++LV+ G +L L++DFGL +++ S
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA---------HPGGRHL--LLTDFG 527
EY+ +RQ+ SG+ ++H L I H L P ++LV+ G +L L++DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 528 LSRRITS 534
L +++ S
Sbjct: 174 LCKKLDS 180
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMAS-----------VRSVQVKLIDLGCTQRVTKLGT 1003
+ G+ +LH + H +++P N+++++ ++++ + D G +++ G
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQ 182
Query: 1004 LIHPINTPNPE----FAAPEVLAEEP-------IFPQTDVWSAGVLAYVLLS-GASPF 1049
N NP + APE+L E + D++S G + Y +LS G PF
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+ +G+ ++ R H ++ N+++++ S+ K+ D G + K PI +
Sbjct: 287 IAEGMAFIEQRNYIHRDLRAANILVSA--SLVCKIADFGLARVGAKF-----PI-----K 334
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
+ APE + ++DVWS G+L +++ G P+ G S PE
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 378
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE + ++DVWS G+L +++ G P+ G S PE + + YR
Sbjct: 329 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYR 387
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
+ +E +M +K P +RPT E
Sbjct: 388 MPRP-ENCPEELYNIMMRCWKNRPEERPTFE 417
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 23/116 (19%)
Query: 239 HRNLVRLHDSYETKDSFTIIS-ELAGGGELLHSLTRQSYYT--------EYDIAHYIRQL 289
H N++R + S ET D F I+ EL L L + EY+ +RQ+
Sbjct: 86 HPNVIRYYCS-ETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVA---------HPGGRHL--LLTDFGLSRRITS 334
SG+ ++H L I H L P ++LV+ G +L L++DFGL +++ S
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA---------HPGGRHL--LLTDFG 527
EY+ +RQ+ SG+ ++H L I H L P ++LV+ G +L L++DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 528 LSRRITS 534
L +++ S
Sbjct: 192 LCKKLDS 198
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMAS-----------VRSVQVKLIDLGCTQRVTKLGT 1003
+ G+ +LH + H +++P N+++++ ++++ + D G +++ G
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS-GQ 200
Query: 1004 LIHPINTPNPE----FAAPEVLAEEP---IFPQTDVWSAGVLAYVLLS-GASPF 1049
N NP + APE+L E + D++S G + Y +LS G PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRN---YAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+G G +G V + R G+ A K + G + + F +E IM Q H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
I++E G L L T +T + +R + +G+ Y+ L H
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRD 176
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
L ++LV ++DFGLSR
Sbjct: 177 LAARNVLV--DSNLVCKVSDFGLSR 199
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV--------TKLGTLIHPIN 1009
G++YL G H ++ NV++ S ++ K+ D G ++ + T G I PI
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDS--NLVCKVSDFGLSRVLEDDPDAAYTTTGGKI-PIR 219
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAY-VLLSGASPF 1049
+ APE +A +DVWS GV+ + VL G P+
Sbjct: 220 -----WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V +G+ YL + H ++ N ++ + ++V D G T+ V T P
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVS--DFGMTRFVLD-DQYTSSTGTKFPV 168
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
++A+PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 218
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
F K +PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 218
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,6-Difluorophenyl)-1h-1,
2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y T + ++YL + H ++ N ++ V+V D G ++ +T H
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVA--DFGLSRLMTGDTYTAHAGA 191
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
++ APE LA ++DVW+ GVL + + + G SP+ G
Sbjct: 192 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 234
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR- 1192
A F K APE LA ++DVW+ GVL + + + G SP+ G + Q + +
Sbjct: 190 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYDLLEK 246
Query: 1193 -YRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
YR E + + + +K +P RP+ E H+
Sbjct: 247 GYRMEQP-EGCPPKVYELMRACWKWSPADRPSFAETHQ 283
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-TLIHPINTPNPEFA 1016
GL YLH R + H +++ N+++ + K+ D G +++ T+L T + + +
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLD--ENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
PE + + ++DV+S GV+ + +L S QS P R+ VN + E
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV-QSLP--REMVNLAEWAVE 258
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 19/108 (17%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
V+ +Q+ H RG+ H +I+ +N+++ +R KLID G G L+H + P +
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILI-DLRRGCAKLIDFGS-------GALLH--DEPYTD 197
Query: 1015 F------AAPEVLAEEP--IFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
F + PE ++ P T VWS G+L Y ++ G PF E
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPAT-VWSLGILLYDMVCGDIPFERDQE 244
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V +G+ YL + H ++ N ++ + ++V D G T+ V T P
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS--DFGMTRFVLD-DQYTSSTGTKFPV 171
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
++A+PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 221
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
F K +PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 221
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 35/134 (26%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV--TKLGTL----- 1004
+ ++ L+ +H G+ H +++P N + + R + L+D G Q TK+ L
Sbjct: 123 MLNLFKALKRIHQFGIVHRDVKPSNF-LYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 1005 ---------------------IHPINTPNPEFAAPEVLAEEPIFPQT---DVWSAGVLAY 1040
+ P P F APEVL + P QT D+WSAGV+
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAP-RAGTPGFRAPEVLTKCP--NQTTAIDMWSAGVIFL 238
Query: 1041 VLLSGASPFRGQSE 1054
LLSG PF S+
Sbjct: 239 SLLSGRYPFYKASD 252
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 1143 QAPEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSE 1181
+APEVL + P QT D+WSAGV+ LLSG PF S+
Sbjct: 213 RAPEVLTKCP--NQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 38.9 bits (89), Expect = 0.022, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL R H ++ N+++ S VK+ D G ++ L + + P
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVES--EAHVKIADFGLA-KLLPLDKDYYVVREPG 190
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L++ Q+DVWS GV+ Y L +
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V +G+ YL + H ++ N ++ + ++V D G T+ V T P
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS--DFGMTRFVLD-DQYTSSTGTKFPV 168
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
++A+PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 218
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
F K +PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 218
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V +G+ YL + H ++ N ++ + ++V D G T+ V T P
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS--DFGMTRFVLD-DQYTSSTGTKFPV 169
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
++A+PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 219
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
F K +PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI--NTP 1011
+ +G+ YLH + H ++ NV++ + R V++ D G + V + G + + +
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIG--DFGLAKAVPE-GHEXYRVREDGD 198
Query: 1012 NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E + +DVWS GV Y LL+
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V +G+ YL + H ++ N ++ + ++V D G T+ V T P
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS--DFGMTRFVLD-DQYTSSTGTKFPV 166
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
++A+PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 216
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
F K +PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 38.5 bits (88), Expect = 0.024, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL R H ++ N+++ S VK+ D G ++ L + + P
Sbjct: 122 SQICKGMEYLGSRRCVHRDLAARNILVES--EAHVKIADFGLA-KLLPLDKDYYVVREPG 178
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L++ Q+DVWS GV+ Y L +
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 38.5 bits (88), Expect = 0.026, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL R H ++ N+++ S VK+ D G ++ L + + P
Sbjct: 121 SQICKGMEYLGSRRCVHRDLAARNILVES--EAHVKIADFGLA-KLLPLDKDYYVVREPG 177
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L++ Q+DVWS GV+ Y L +
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V +G+ YL + H ++ N ++ + ++V D G T+ V T P
Sbjct: 132 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS--DFGMTRFVLD-DQYTSSTGTKFPV 188
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
++A+PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 238
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
F K +PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 186 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 238
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-TKLGTLIHPINT 1010
+ G+ YL R H ++ NV++ S QVK+ D G T+ + T +
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 1011 PNPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L + + +DVWS GV + LL+
Sbjct: 190 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-TKLGTLIHPINT 1010
+ G+ YL R H ++ NV++ S QVK+ D G T+ + T +
Sbjct: 120 AVQICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 1011 PNPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L + + +DVWS GV + LL+
Sbjct: 178 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
Length = 317
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT--------KL 1001
+ + + GL+ +H +G H +++P N+++ Q L+DLG + L
Sbjct: 138 WLLLGICRGLEAIHAKGYAHRDLKPTNILLGD--EGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP---IFPQTDVWSAGVLAYVLLSGASPF 1049
+ APE+ + + I +TDVWS G + Y ++ G P+
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H N+ N+++ + +VK+ D G T +V + + P
Sbjct: 122 SQICKGMEYLGTKRYIHRNLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEYYKVKEPG 178
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 179 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI--NTP 1011
+ +G+ YLH + H + NV++ + R V K+ D G + V + G + + +
Sbjct: 120 QICEGMAYLHAQHYIHRALAARNVLLDNDRLV--KIGDFGLAKAVPE-GHEYYRVREDGD 176
Query: 1012 NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E + +DVWS GV Y LL+
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDAEX 164
Query: 1004 LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV 1061
++ APE + ++DVWS G+ L ++ G P+ G + PE QN+
Sbjct: 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 229 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 258
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 170 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 229
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 230 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 259
Score = 37.7 bits (86), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 108 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEX 165
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 166 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220
Query: 1058 RQNV 1061
QN+
Sbjct: 221 IQNL 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI--NTP 1011
+ +G+ YLH + H + NV++ + R V K+ D G + V + G + + +
Sbjct: 119 QICEGMAYLHAQHYIHRALAARNVLLDNDRLV--KIGDFGLAKAVPE-GHEYYRVREDGD 175
Query: 1012 NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E + +DVWS GV Y LL+
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 37.7 bits (86), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 229 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 258
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEX 164
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 165 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 1058 RQNV 1061
QN+
Sbjct: 220 IQNL 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 37.7 bits (86), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 229 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 258
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEY 164
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 165 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 1058 RQNV 1061
QN+
Sbjct: 220 IQNL 223
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.7 bits (86), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 102 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEY 159
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 160 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
Query: 1058 RQNV 1061
QN+
Sbjct: 215 IQNL 218
Score = 37.7 bits (86), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 164 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 223
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 224 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 253
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 37.7 bits (86), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 171 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 230
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 231 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 260
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 109 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEX 166
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 167 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221
Query: 1058 RQNV 1061
QN+
Sbjct: 222 IQNL 225
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 179 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 238
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 239 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 268
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 117 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEY 174
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 175 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
Query: 1058 RQNV 1061
QN+
Sbjct: 230 IQNL 233
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 229 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 258
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 107 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEX 164
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 165 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 1058 RQNV 1061
QN+
Sbjct: 220 IQNL 223
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 37.7 bits (86), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 177 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 236
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 237 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 266
Score = 37.4 bits (85), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 115 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEX 172
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 173 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
Query: 1058 RQNV 1061
QN+
Sbjct: 228 IQNL 231
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 37.7 bits (86), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 175 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 234
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 235 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 264
Score = 37.7 bits (86), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 113 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEY 170
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 171 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
Query: 1058 RQNV 1061
QN+
Sbjct: 226 IQNL 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 37.7 bits (86), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 174 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 233
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 234 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 263
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 112 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEY 169
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 170 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
Query: 1058 RQNV 1061
QN+
Sbjct: 225 IQNL 228
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+ G+ Y+H + L H +++P N+ + + QVK+ D G + G T
Sbjct: 145 ITKGVDYIHSKKLIHRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRTRSKGTLR-- 200
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLL 1043
+ +PE ++ + + D+++ G++ LL
Sbjct: 201 YMSPEQISSQDYGKEVDLYALGLILAELL 229
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRY 347
Q+ G+DY+H + H L P ++ + + + + DFGL + + GK + +RY
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFLVDT--KQVKIGDFGLVTSLKNDGKRTRSKGTLRY 201
Query: 348 V 348
+
Sbjct: 202 M 202
Score = 30.8 bits (68), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 537
Q+ G+DY+H + H L P ++ + + + + DFGL + + GK
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFLVDT--KQVKIGDFGLVTSLKNDGK 191
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 37.7 bits (86), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 175 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 234
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 235 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 264
Score = 37.4 bits (85), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 113 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEX 170
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 171 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
Query: 1058 RQNV 1061
QN+
Sbjct: 226 IQNL 229
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With
A Staurosporine Analogue
Length = 290
Score = 37.4 bits (85), Expect = 0.050, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL R H ++ N+++ S VK+ D G ++ L + P
Sbjct: 118 SQICKGMEYLGSRRCVHRDLAARNILVES--EAHVKIADFGLA-KLLPLDKDXXVVREPG 174
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L++ Q+DVWS GV+ Y L +
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRL---- 245
L G VY A + SGR YA K + + E+ M +L H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 246 ----HDSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
+S + F +++EL G E L + + + + Q + +MHR
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 300 S--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
I H L +LL+++ G + L DFG + I+ +
Sbjct: 156 KPPIIHRDLKVENLLLSNQG--TIKLCDFGSATTISHY 191
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+K ++NY + +A+ + W APE + ++DVWS
Sbjct: 188 DFGLARDIKNDSNYVVKGNARLPVKW--------------MAPESIFNCVYTFESDVWSY 233
Query: 1163 GVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKE-LTQEATRFLMLIFKRAPGK 1220
G+ + L S G+SP+ G P + ++ F L E E + + P K
Sbjct: 234 GIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 291
Query: 1221 RPTVEE 1226
RPT ++
Sbjct: 292 RPTFKQ 297
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+ +L + H ++ N+++ R K+ D G + + + N P
Sbjct: 154 VAKGMAFLASKNCIHRDLAARNILLTHGRIT--KICDFGLARDIKNDSNYVVKGNARLPV 211
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQ 1052
++ APE + ++DVWS G+ + L S G+SP+ G
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.4 bits (85), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPETRQNV--NFV 1191
A F K APE + ++DVWS G+ L ++ G P+ G + PE QN+ +
Sbjct: 178 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 237
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
R + +EL Q + L +K P RPT +
Sbjct: 238 MVRPDNCPEELYQ----LMRLCWKERPEDRPTFD 267
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 944 TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----- 998
T +K + +G+ ++ R H ++ N++++ ++ K+ D G + +
Sbjct: 116 TINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEX 173
Query: 999 TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGV-LAYVLLSGASPFRGQSEPET 1057
T PI ++ APE + ++DVWS G+ L ++ G P+ G + PE
Sbjct: 174 TAREGAKFPI-----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228
Query: 1058 RQNV 1061
QN+
Sbjct: 229 IQNL 232
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 37.4 bits (85), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 34/179 (18%)
Query: 187 FGDELGRGVTGIVYHAVERSSGR-----NYAAKVM--TGKGNQYKSLFKNELDIMNQLC- 238
FG LG G G V A G+ A K++ T ++ ++L +EL IM+ L
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM-SELKIMSHLGQ 93
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYT-------------------- 278
H N+V L + +I+E G+LL+ L R++
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 279 ---EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
D+ H+ Q+ G+ ++ + H + ++L+ + G + DFGL+R I +
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMN 210
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ V G+ +L + H ++ NV++ + ++ D G + + I N
Sbjct: 165 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG--DFGLARDIMNDSNYIVKGNARL 222
Query: 1013 P-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE + + Q+DVWS G+L + + S G +P+ G
Sbjct: 223 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+ ++NY + +A+ + W APE + + Q+DVWS
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKW--------------MAPESIFDCVYTVQSDVWSY 246
Query: 1163 GVLAYVLLS-GASPFRG 1178
G+L + + S G +P+ G
Sbjct: 247 GILLWEIFSLGLNPYPG 263
>pdb|3QQN|A Chain A, The Retinal Specific Cd147 Ig0 Domain: From Molecular
Structure To Biological Activity
pdb|3QQN|B Chain B, The Retinal Specific Cd147 Ig0 Domain: From Molecular
Structure To Biological Activity
Length = 137
Score = 37.4 bits (85), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 889 RDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
R H F + P++ +G +E+ C AVG P P IQW+ G
Sbjct: 17 RGSHXAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEG 59
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+K ++NY + +A+ + W APE + ++DVWS
Sbjct: 211 DFGLARDIKNDSNYVVKGNARLPVKW--------------MAPESIFNCVYTFESDVWSY 256
Query: 1163 GVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKE-LTQEATRFLMLIFKRAPGK 1220
G+ + L S G+SP+ G P + ++ F L E E + + P K
Sbjct: 257 GIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 314
Query: 1221 RPTVEE 1226
RPT ++
Sbjct: 315 RPTFKQ 320
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+ +L + H ++ N+++ R K+ D G + + + N P
Sbjct: 177 VAKGMAFLASKNCIHRDLAARNILLTHGRIT--KICDFGLARDIKNDSNYVVKGNARLPV 234
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQ 1052
++ APE + ++DVWS G+ + L S G+SP+ G
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.0 bits (84), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+K ++NY + +A+ + W APE + ++DVWS
Sbjct: 206 DFGLARDIKNDSNYVVKGNARLPVKW--------------MAPESIFNCVYTFESDVWSY 251
Query: 1163 GVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKE-LTQEATRFLMLIFKRAPGK 1220
G+ + L S G+SP+ G P + ++ F L E E + + P K
Sbjct: 252 GIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 309
Query: 1221 RPTVEE 1226
RPT ++
Sbjct: 310 RPTFKQ 315
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+ +L + H ++ N+++ R K+ D G + + + N P
Sbjct: 172 VAKGMAFLASKNCIHRDLAARNILLTHGRIT--KICDFGLARDIKNDSNYVVKGNARLPV 229
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQ 1052
++ APE + ++DVWS G+ + L S G+SP+ G
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 269
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.0 bits (84), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+K ++NY + +A+ + W APE + ++DVWS
Sbjct: 204 DFGLARDIKNDSNYVVKGNARLPVKW--------------MAPESIFNCVYTFESDVWSY 249
Query: 1163 GVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKE-LTQEATRFLMLIFKRAPGK 1220
G+ + L S G+SP+ G P + ++ F L E E + + P K
Sbjct: 250 GIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 307
Query: 1221 RPTVEE 1226
RPT ++
Sbjct: 308 RPTFKQ 313
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+ +L + H ++ N+++ R K+ D G + + + N P
Sbjct: 170 VAKGMAFLASKNCIHRDLAARNILLTHGRIT--KICDFGLARDIKNDSNYVVKGNARLPV 227
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQ 1052
++ APE + ++DVWS G+ + L S G+SP+ G
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 267
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 37.0 bits (84), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
+ +G+ ++ R H ++ N+++++ S+ K+ D G RV + P
Sbjct: 293 IAEGMAFIEQRNYIHRDLRAANILVSA--SLVCKIADFGLA-RVIEDNEYTAREGAKFPI 349
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
++ APE + ++DVWS G+L +++ G P+ G S PE
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 394
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE + ++DVWS G+L +++ G P+ G S PE + + YR
Sbjct: 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYR 403
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
+ +E +M +K P +RPT E
Sbjct: 404 MPRP-ENCPEELYNIMMRCWKNRPEERPTFE 433
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 37.0 bits (84), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETD 214
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 215 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 267
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.0 bits (84), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK------LGTLI 1005
V + G++YL + H ++ NV++ + VK+ DLG + V LG +
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVYD--KLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFV 1064
PI + APE + +D+WS GV+ + + S G P+ G S + V +
Sbjct: 192 LPIR-----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV---VEMI 243
Query: 1065 RYR 1067
R R
Sbjct: 244 RNR 246
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 24/171 (14%)
Query: 184 AYDFGDELGRGVTGIVY--HAVERSSG-RNYAAKVMTGKGNQYKSL---FKNELDIMNQL 237
A F +ELG G VY H + G + A + T K L F++E + +L
Sbjct: 10 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL 69
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEY----------------D 281
H N+V L ++I G+L L +S +++ D
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
H + Q+ +G++Y+ + H L ++LV ++ ++D GL R +
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY--DKLNVKISDLGLFREV 178
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
Length = 308
Score = 37.0 bits (84), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT--- 999
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIXETD 186
Query: 1000 ---KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 187 XXRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK------LG 1002
+ V + G++YL + H ++ NV++ + VK+ DLG + V LG
Sbjct: 148 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYD--KLNVKISDLGLFREVYAADYYKLLG 205
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
+ PI + APE + +D+WS GV+ + + S G P+ G S + V
Sbjct: 206 NSLLPIR-----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV---V 257
Query: 1062 NFVRYR 1067
+R R
Sbjct: 258 EMIRNR 263
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVY--HAVERSSG-RNYAAKVMTGKGNQYKSL-- 226
+Q K + ++ A F +ELG G VY H + G + A + T K L
Sbjct: 16 KQAKLKEISLS-AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE 74
Query: 227 -FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEY----- 280
F++E + +L H N+V L ++I G+L L +S +++
Sbjct: 75 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 281 -----------DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
D H + Q+ +G++Y+ + H L ++LV ++ ++D GL
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY--DKLNVKISDLGLF 192
Query: 330 RRI 332
R +
Sbjct: 193 REV 195
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT--- 999
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIXETD 177
Query: 1000 ---KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 178 XXRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 230
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
Length = 301
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETD 179
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 180 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With
An Hydantoin Inhibitor
Length = 305
Score = 36.6 bits (83), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETD 183
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 184 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 236
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.6 bits (83), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETD 186
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 187 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 239
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISE-LAGGGELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E + +L +T + E + Q+
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 160
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 197 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 247
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 248 SDRPTFEEIQNHPWM 262
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 178
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 219
>pdb|2DM2|A Chain A, Solution Structure Of The First Ig Domain Of Human
Palladin
Length = 110
Score = 36.6 bits (83), Expect = 0.099, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCV 952
APFF K + G + C G PKP I WFK G + D Y +
Sbjct: 8 APFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQI---------SPKSDHYTI 58
Query: 953 TSVLDGLQYLH 963
LDG LH
Sbjct: 59 QRDLDGTCSLH 69
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETD 192
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 193 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
+LDG+ YLH + H +++P N+++ +VK+ D+G + + + P+
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL---FNSPLKPLADL 192
Query: 1012 NPE-----FAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSE 1054
+P + APE+L + + D+W+ G + LL+ F + E
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (34)
Length = 307
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETD 185
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 186 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETD 182
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 183 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETD 185
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 186 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N ++A VK+ D G T+ +
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETD 192
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 193 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
>pdb|2LQR|A Chain A, Nmr Structure Of Ig3 Domain Of Palladin
Length = 108
Score = 36.2 bits (82), Expect = 0.12, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCV 952
APFF K + G + C G PKP I WFK G + D Y +
Sbjct: 7 APFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQI---------SPKSDHYTI 57
Query: 953 TSVLDGLQYLH 963
LDG LH
Sbjct: 58 QRDLDGTCSLH 68
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 957 DGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-TLIHPINTPNPEF 1015
+G+ +LH H +I+ N+++ + K+ D G + K T++ +
Sbjct: 144 NGINFLHENHHIHRDIKSANILLD--EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
APE L E I P++D++S GV+ +++G EP+
Sbjct: 202 MAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TKLGTLIHP 1007
+ +G+ ++ R H ++ N+++++ S+ K+ D G + + T P
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVSA--SLVCKIADFGLARVIEDNEYTAREGAKFP 175
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
I ++ APE + ++DVWS G+L +++ G P+ G S PE
Sbjct: 176 I-----KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 221
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
A F K APE + ++DVWS G+L +++ G P+ G S PE + + YR
Sbjct: 172 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYR 230
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVE 1225
+ +E +M +K P +RPT E
Sbjct: 231 MPRP-ENCPEELYNIMMRCWKNRPEERPTFE 260
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 28/172 (16%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI--MNQLCHRNLVR--LH 246
+GRG G VY R A KV + Q F NE +I + + H N+ R +
Sbjct: 21 IGRGRYGAVYKG--SLDERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVG 75
Query: 247 DSYETKDS---FTIISELAGGGELLH--SLTRQSYYTEYDIAHYIRQLLSGLDYMH---- 297
D T D + ++ E G L SL + + +AH + + GL Y+H
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTR---GLAYLHTELP 132
Query: 298 -----RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYD 344
+ +I+H L ++LV + G +++DFGLS R+T + P E D
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGT--CVISDFGLSMRLTGNRLVRPGEED 182
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 463 PGGELLH--SLTRQSYYTEYDIAHYIRQLLSGLDYMH---------RLSIAHLGLTPGDL 511
P G L SL + + +AH + + GL Y+H + +I+H L ++
Sbjct: 95 PNGSLXKYLSLHTSDWVSSCRLAHSVTR---GLAYLHTELPRGDHYKPAISHRDLNSRNV 151
Query: 512 LVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNG 546
LV + G +++DFGLS R+T + P E N
Sbjct: 152 LVKNDGT--CVISDFGLSMRLTGNRLVRPGEEDNA 184
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor
Nvp-Bbt594
Length = 295
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEFFKVKEPG 177
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ V G+ +L + H ++ NV++ + K+ D G + + I N
Sbjct: 173 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYIVKGNARL 230
Query: 1013 P-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ APE + + Q+DVWS G+L + + S G +P+ G
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 271
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F +D+ ++NY + +A+ + W APE + + Q+DVWS
Sbjct: 209 DFGLARDIMNDSNYIVKGNARLPVKW--------------MAPESIFDCVYTVQSDVWSY 254
Query: 1163 GVLAYVLLS-GASPFRG 1178
G+L + + S G +P+ G
Sbjct: 255 GILLWEIFSLGLNPYPG 271
>pdb|3LCY|A Chain A, Titin Ig Tandem Domains A164-A165
pdb|3LCY|B Chain B, Titin Ig Tandem Domains A164-A165
pdb|3LCY|C Chain C, Titin Ig Tandem Domains A164-A165
pdb|3LCY|D Chain D, Titin Ig Tandem Domains A164-A165
Length = 197
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
G AP R++ + +G+ ++ C VG P P I+W++ G
Sbjct: 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFG 45
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 957 DGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-TLIHPINTPNPEF 1015
+G+ +LH H +I+ N+++ + K+ D G + K T++ +
Sbjct: 144 NGINFLHENHHIHRDIKSANILLD--EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAY 201
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
APE L E I P++D++S GV+ +++G EP+
Sbjct: 202 MAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 241
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 232 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 282
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 283 SDRPTFEEIQNHPWM 297
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 99 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 158
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 195
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 213
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 254
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 225 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 275
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 276 SDRPTFEEIQNHPWM 290
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 188
Score = 31.2 bits (69), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 206
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 198 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 248
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 249 SDRPTFEEIQNHPWM 263
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 161
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 179
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---- 998
P+ K + DG+ YL+ H ++ N +A VK+ D G T+ +
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVA--EDFTVKIGDFGMTRDIYETD 179
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQS 1053
K G + P+ + +PE L + +DVWS GV+ + + + A P++G S
Sbjct: 180 YYRKGGKGLLPVR-----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With (3e)-3-[(4-
Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 197 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 247
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 248 SDRPTFEEIQNHPWM 262
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 160
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 178
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 219
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 213 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 263
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 264 SDRPTFEEIQNHPWM 278
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 176
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 194
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 240 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 290
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 291 SDRPTFEEIQNHPWM 305
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 203
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 221
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 262
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 212 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 262
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 263 SDRPTFEEIQNHPWM 277
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 79 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 138
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 175
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 193
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 234
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 196 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 246
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 247 SDRPTFEEIQNHPWM 261
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 159
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 177
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 218
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 240 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 290
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 291 SDRPTFEEIQNHPWM 305
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 221
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 262
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With Inhibitor
(2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 198 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 248
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 249 SDRPTFEEIQNHPWM 263
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 161
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 179
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 193 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 243
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 244 SDRPTFEEIQNHPWM 258
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELDI 233
P+ Y G LG G G VY + S A K V + + + L E+ +
Sbjct: 1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 234 MNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQLL 290
+ ++ ++RL D +E DSF +I E +L +T + E + Q+L
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
+ + H + H + ++L+ G L L DFG
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 156
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 174
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 198 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSSECQHLIRWCLALRP 248
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 249 SDRPTFEEIQNHPWM 263
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 161
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 179
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 213 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSXECQHLIRWCLALRP 263
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 264 SDRPTFEEIQNHPWM 278
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 176
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 194
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 193 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSXECQHLIRWCLALRP 243
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 244 SDRPTFEEIQNHPWM 258
Score = 33.9 bits (76), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELDI 233
P+ Y G LG G G VY + S A K V + + + L E+ +
Sbjct: 1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 234 MNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQLL 290
+ ++ ++RL D +E DSF +I E +L +T + E + Q+L
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
+ + H + H + ++L+ G L L DFG
Sbjct: 121 EAVRHCHNXGVLHRDIKDENILIDLNRGE-LKLIDFG 156
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTR 173
Query: 1014 EFAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 220 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSXECQHLIRWCLALRP 270
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 271 SDRPTFEEIQNHPWM 285
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 87 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 146
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 147 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 183
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 201
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 242
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 212 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSXECQHLIRWCLALRP 262
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 263 SDRPTFEEIQNHPWM 277
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 79 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 138
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 175
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 193
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 234
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole Inhibitor
Vx3
Length = 333
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 245 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSXECQHLIRWCLALRP 295
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 296 SDRPTFEEIQNHPWM 310
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 112 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 171
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 172 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 208
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 226
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 267
>pdb|3QR2|A Chain A, Wild Type Cd147 Ig0 Domain
pdb|3QR2|B Chain B, Wild Type Cd147 Ig0 Domain
Length = 137
Score = 35.4 bits (80), Expect = 0.21, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 889 RDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWF 928
R H F + P++ +G +E+ C AVG P P IQW+
Sbjct: 17 RGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWW 56
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At 2.6
Ang Resolution
Length = 328
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 240 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSXECQHLIRWCLALRP 290
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 291 SDRPTFEEIQNHPWM 305
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 203
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 221
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 262
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + +G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 119 WCV-QIAEGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 175
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 219
Score = 30.4 bits (67), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 116 LLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 166
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 128 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 184
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 185 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI---HPINT 1010
++L+ + +H G+ H +++P N ++ +KLID G ++ T + + T
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 1011 PNPEFAAPEVLAE-----------EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
N + PE + + I P++DVWS G + Y + G +PF+
Sbjct: 220 VN--YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 180
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 126 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 182
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 30/150 (20%)
Query: 930 LGTSTLCYL------PIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMA--- 980
LG +T +L P +P AY + L++LH L H +++P+N++
Sbjct: 104 LGKNTFEFLKENNFQPYPLPHVRHMAY---QLCHALRFLHENQLTHTDLKPENILFVNSE 160
Query: 981 --------------SVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026
SV++ +++ D G + T I + PEV+ E
Sbjct: 161 FETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI----VATRHYRPPEVILELGW 216
Query: 1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
DVWS G + + G + F+ E
Sbjct: 217 AQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 30/150 (20%)
Query: 930 LGTSTLCYL------PIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMA--- 980
LG +T +L P +P AY + L++LH L H +++P+N++
Sbjct: 113 LGKNTFEFLKENNFQPYPLPHVRHMAY---QLCHALRFLHENQLTHTDLKPENILFVNSE 169
Query: 981 --------------SVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026
SV++ +++ D G + T I + PEV+ E
Sbjct: 170 FETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI----VATRHYRPPEVILELGW 225
Query: 1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
DVWS G + + G + F+ E
Sbjct: 226 AQPCDVWSIGCILFEYYRGFTLFQTHENRE 255
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 180
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 208
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 177
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 30/150 (20%)
Query: 930 LGTSTLCYL------PIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMA--- 980
LG +T +L P +P AY + L++LH L H +++P+N++
Sbjct: 136 LGKNTFEFLKENNFQPYPLPHVRHMAY---QLCHALRFLHENQLTHTDLKPENILFVNSE 192
Query: 981 --------------SVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026
SV++ +++ D G + T I + PEV+ E
Sbjct: 193 FETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI----VATRHYRPPEVILELGW 248
Query: 1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
DVWS G + + G + F+ E
Sbjct: 249 AQPCDVWSIGCILFEYYRGFTLFQTHENRE 278
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVV--------MASVRSVQVKLIDLGCTQRVT- 999
AY + VL L Y+H G H +++ +++ ++ +RS + +I G QRV
Sbjct: 131 AYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRS-NLSMISHGQRQRVVH 189
Query: 1000 ---KLGTLIHPINTPNPEFAAPEVLAE--EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
K + P + +PEVL + + ++D++S G+ A L +G PF+
Sbjct: 190 DFPKYSVKVLP-------WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 120 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 176
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 177 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 147 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 203
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 204 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 247
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 144 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 194
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 127 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 183
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 184 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 180
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3K0W|A Chain A, Crystal Structure Of The Tandem Ig-Like C2-Type 2 Domains Of
The Human Mucosa-Associated Lymphoid Tissue Lymphoma
Translocation Protein 1
Length = 218
Score = 35.0 bits (79), Expect = 0.26, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 899 KPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTH--KDAYCVTSVL 956
+P + ++ G L ++C+AVG P P QWFK +P TH K Y V V
Sbjct: 124 EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNE----------LPLTHETKKLYMVPYVD 173
Query: 957 DGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Q +W CH+ + D S S +V++I + +L L HP N
Sbjct: 174 LEHQGTYW---CHVYNDRD-----SQDSKKVEII-------IDELNNLGHPDN 211
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+ +L + H ++ N+++ R K+ D G + + + N P
Sbjct: 177 VAKGMAFLASKNCIHRDLAARNILLTHGRIT--KICDFGLARHIKNDSNYVVKGNARLPV 234
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQ 1052
++ APE + ++DVWS G+ + L S G+SP+ G
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 18/126 (14%)
Query: 1103 EFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSA 1162
+F + +K ++NY + +A+ + W APE + ++DVWS
Sbjct: 211 DFGLARHIKNDSNYVVKGNARLPVKW--------------MAPESIFNCVYTFESDVWSY 256
Query: 1163 GVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKE-LTQEATRFLMLIFKRAPGK 1220
G+ + L S G+SP+ G P + ++ F L E E + + P K
Sbjct: 257 GIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 314
Query: 1221 RPTVEE 1226
RPT ++
Sbjct: 315 RPTFKQ 320
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E + F R R ++ E + P
Sbjct: 213 VWSLGILLYDMVCGDIPF--EHDEEIIRGQVFFRQR-------VSXECQHLIRWCLALRP 263
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 264 XDRPTFEEIQNHPWM 278
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 176
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 194
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 177
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 132 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 188
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 232
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 129 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 179
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 119 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 175
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 176 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 123 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 179
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 120 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 170
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 116 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 172
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 216
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++
Sbjct: 113 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAK 159
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 125 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 181
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531
Length = 312
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E F R R ++ E + P
Sbjct: 225 VWSLGILLYDMVCGDIPF--EHDEEIIGGQVFFRQR-------VSSECQHLIRWCLALRP 275
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 276 SDRPTFEEIQNHPWM 290
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 188
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 206
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 195
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 122 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 178
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 169
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus
Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With Fluorinated
Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E F R R ++ E + P
Sbjct: 225 VWSLGILLYDMVCGDIPF--EHDEEIIGGQVFFRQR-------VSSECQHLIRWCLALRP 275
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 276 SDRPTFEEIQNHPWM 290
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 188
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 206
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E F R R ++ E + P
Sbjct: 226 VWSLGILLYDMVCGDIPF--EHDEEIIGGQVFFRQR-------VSSECQHLIRWCLALRP 276
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 277 SDRPTFEEIQNHPWM 291
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 189
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 207
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain With
4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 128 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 184
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 185 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 228
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 125 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 175
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP- 1011
+ + G++YL + H ++ N+++ + +VK+ D G T +V + P
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLT-KVLPQDKEXXKVKEPG 195
Query: 1012 -NPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
+P F APE L E +DVWS GV+ Y L +
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 957 DGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-TPNPEF 1015
+G+ +LH H +I+ N+++ + K+ D G + K + +
Sbjct: 138 NGINFLHENHHIHRDIKSANILLD--EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
APE L E I P++D++S GV+ +++G EP+
Sbjct: 196 MAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 235
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVV--------MASVRSVQVKLIDLGCTQRVT- 999
AY + VL L Y+H G H +++ +++ ++ +RS + +I G QRV
Sbjct: 115 AYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRS-NLSMISHGQRQRVVH 173
Query: 1000 ---KLGTLIHPINTPNPEFAAPEVLAE--EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
K + P + +PEVL + + ++D++S G+ A L +G PF+
Sbjct: 174 DFPKYSVKVLP-------WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 222
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E F R R ++ E + P
Sbjct: 226 VWSLGILLYDMVCGDIPF--EHDEEIIGGQVFFRQR-------VSSECQHLIRWCLALRP 276
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 277 SDRPTFEEIQNHPWM 291
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 189
Score = 30.8 bits (68), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 207
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E F R R ++ E + P
Sbjct: 193 VWSLGILLYDMVCGDIPF--EHDEEIIGGQVFFRQR-------VSSECQHLIRWCLALRP 243
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 244 SDRPTFEEIQNHPWM 258
Score = 33.9 bits (76), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELDI 233
P+ Y G LG G G VY + S A K V + + + L E+ +
Sbjct: 1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 234 MNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQLL 290
+ ++ ++RL D +E DSF +I E +L +T + E + Q+L
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
+ + H + H + ++L+ G L L DFG
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 156
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 174
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E F R R ++ E + P
Sbjct: 225 VWSLGILLYDMVCGDIPF--EHDEEIIGGQVFFRQR-------VSXECQHLIRWCLALRP 275
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 276 SDRPTFEEIQNHPWM 290
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 188
Score = 30.8 bits (68), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 206
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 125 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 181
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 172
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPN 1012
++L+ + +H G+ H +++P N ++ +KLID G ++ T ++
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGA 219
Query: 1013 PEFAAPEVLAE-----------EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
+ PE + + I P++DVWS G + Y + G +PF+
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E F R R ++ E + P
Sbjct: 226 VWSLGILLYDMVCGDIPF--EHDEEIIGGQVFFRQR-------VSXECQHLIRWCLALRP 276
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 277 SDRPTFEEIQNHPWM 291
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 189
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 207
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 957 DGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-TPNPEF 1015
+G+ +LH H +I+ N+++ + K+ D G + K + +
Sbjct: 135 NGINFLHENHHIHRDIKSANILLD--EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAY 192
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
APE L E I P++D++S GV+ +++G EP+
Sbjct: 193 XAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 232
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And The
Jnk Inhibitor V
Length = 314
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP 1218
VWS G+L Y ++ G PF + + E F R R ++ E + P
Sbjct: 226 VWSLGILLYDMVCGDIPF--EHDEEIIGGQVFFRQR-------VSXECQHLIRWCLALRP 276
Query: 1219 GKRPTVEECHENRWL 1233
RPT EE + W+
Sbjct: 277 SDRPTFEEIQNHPWM 291
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSL-----FKNELD 232
+P+ Y G LG G G VY + S A K V + + + L E+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 233 IMNQLC--HRNLVRLHDSYETKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQL 289
++ ++ ++RL D +E DSF +I E +L +T + E + Q+
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L + + H + H + ++L+ G L L DFG
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFG 189
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ R ++KLID G L ++
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG---ALLKDTVYTDFDGTRV 207
Query: 1015 FAAPEVLAEEPIFPQTD-VWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + ++ VWS G+L Y ++ G PF E
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
Length = 450
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL---GTLIHPINTP 1011
V + ++YL H ++ NV+++ +V D G T+ + G L P+
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS--DFGLTKEASSTQDTGKL--PV--- 350
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPF 1049
++ APE L E+ ++DVWS G+L + + S G P+
Sbjct: 351 --KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 122 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 178
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 169
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 122 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 178
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 169
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 123 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 179
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 120 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 170
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 129 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 185
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 176
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 124 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 180
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 171
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With Amp-
Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 122 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 178
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 169
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 125 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 181
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 172
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 914 KCLAVGEPKPVIQWFKL-GTSTLCYLPIVIPTTHKDAYCVTS--------------VLDG 958
+ L G P ++WF + G + + ++ P+ +D + S +++
Sbjct: 57 RILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSL-EDLFNFCSRKLSLKTVLMLADQMINR 115
Query: 959 LQYLHWRGLCHLNIEPDNVVMA-SVRSVQVKLIDLGCTQRVTKLGTLIH 1006
++++H + H +I+PDN +M R+ QV +ID G ++ T H
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH 164
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 129 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 185
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 176
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 124 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 180
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 171
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 125 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 181
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 172
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 129 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 185
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 176
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 125 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 181
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 172
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+ G+ Y+H + L + +++P N+ + + QVK+ D G + G T
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRXRSKGTLR-- 186
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLL 1043
+ +PE ++ + + D+++ G++ LL
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
Length = 327
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 122 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 178
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 169
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 156 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 212
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 213 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 256
Score = 30.4 bits (67), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++
Sbjct: 153 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAK 199
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 126 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAEEKEYHAEG 182
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ ++ Q+ G++Y+ + H L ++LV P +H+ +TDFGL++ + +
Sbjct: 123 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 173
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
Length = 344
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ G+ YL G+ H N+ NV++ S VQV D G + +
Sbjct: 140 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVA--DFGVADLLPPDDKQLLYSEAKT 197
Query: 1013 P-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ GA P+ G
Sbjct: 198 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 238
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ +G+ Y+ + H ++ NV+++ S+ K+ D G RV +
Sbjct: 117 AQIAEGMAYIERKNYIHRDLRAANVLVS--ESLMCKIADFGLA-RVIEDNEYTAREGAKF 173
Query: 1013 P-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQS 1053
P ++ APE + ++DVWS G+L Y +++ G P+ G++
Sbjct: 174 PIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT 216
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT--KLGTLIHPINT 1010
+ G+ YL G+ H N+ NV++ S VQV D G + L T
Sbjct: 122 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVA--DFGVADLLPPDDKQLLYSEAKT 179
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ GA P+ G
Sbjct: 180 PI-KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220
>pdb|1UEM|A Chain A, Solution Structure Of The First Fibronectin Type Iii Domain
Of Human Kiaa1568 Protein
Length = 117
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 1076 TQEATRFLMLIFKHEVD--WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGI 1133
T A+ +++ F V W T+AN++ + V+ L+ T Y F + A N G S+
Sbjct: 43 TLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSP 102
Query: 1134 PSALFKTKEQAPE 1146
S +T++ P
Sbjct: 103 MSDPVRTQDSGPS 115
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL---GTLIHPINTP 1011
V + ++YL H ++ NV+++ +V D G T+ + G L P+
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS--DFGLTKEASSTQDTGKL--PV--- 178
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPF 1049
++ APE L E+ ++DVWS G+L + + S G P+
Sbjct: 179 --KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 953 TSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
+++ L YL + G+ H +++P N+++ Q+KL D G + R+ + +
Sbjct: 131 VAIVKALYYLKEKHGVIHRDVKPSNILLDE--RGQIKLCDFGISGRL--VDDKAKDRSAG 186
Query: 1012 NPEFAAPE-VLAEEPIFP----QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
+ APE + +P P + DVWS G+ L +G P++ +
Sbjct: 187 CAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN------------CKT 234
Query: 1067 RFEYLFKELTQE 1078
FE L K L +E
Sbjct: 235 DFEVLTKVLQEE 246
Score = 33.5 bits (75), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 8/157 (5%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS---LFKNELDIMNQL 237
I D + G E+G G G V+ R +G A K M GN+ ++ L ++ + +
Sbjct: 24 INDLENLG-EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHD 82
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM- 296
C +V+ ++ T I EL G Q E + ++ L Y+
Sbjct: 83 CPY-IVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK 141
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
+ + H + P ++L+ G + L DFG+S R+
Sbjct: 142 EKHGVIHRDVKPSNILLDERG--QIKLCDFGISGRLV 176
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G Q + K G + P+
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV-- 210
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 211 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A+ K PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 18/92 (19%)
Query: 967 LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026
+ H +I+P N+++ RS +KL D G + G L+ I P +A E I
Sbjct: 147 IIHRDIKPSNILLD--RSGNIKLCDFGIS------GQLVDSIAKTRDAGCRP-YMAPERI 197
Query: 1027 FP---------QTDVWSAGVLAYVLLSGASPF 1049
P ++DVWS G+ Y L +G P+
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL---GTLIHPINTP 1011
V + ++YL H ++ NV+++ +V D G T+ + G L P+
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS--DFGLTKEASSTQDTGKL--PV--- 163
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPF 1049
++ APE L E+ ++DVWS G+L + + S G P+
Sbjct: 164 --KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 124 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKLLGAEEKEYHAEG 180
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 34.3 bits (77), Expect = 0.54, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V +G+ +L H ++ N ++ R + VK+ D G T+ V + + T P
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCLVD--RDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPV 169
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPF 1049
+++APEV ++DVW+ G+L + + S G P+
Sbjct: 170 KWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 33.9 bits (76), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 124 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKLLGAEEKEYHAEG 180
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3P3Y|A Chain A, Crystal Structure Of Neurofascin Homophilic Adhesion
Complex In Space Group P6522
pdb|3P40|A Chain A, Crystal Structure Of Neurofascin Adhesion Complex In Space
Group P3221
Length = 404
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 23/96 (23%)
Query: 836 RFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPF 895
R T+V +E+ + NK G+ +RH I R +A AP+
Sbjct: 278 RITNVSEEDSGEYFCLASNKMGS--------IRHTISVRVKA---------------APY 314
Query: 896 FREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ ++P + + G+ + C A G PKP +QW G
Sbjct: 315 WLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNG 350
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V + ++YL + H ++ N ++ V+V D G ++ V + + P
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS--DFGLSRYVLD-DEYTSSVGSKFPV 170
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 171 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 219
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
F + PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 219
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V + ++YL + H ++ N ++ V+V D G ++ V + + P
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS--DFGLSRYVLD-DEYTSSVGSKFPV 165
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 166 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 214
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
F + PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 122 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKLLGAEEKEYHAEG 178
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 129 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKLLGAEEKEYHAEG 185
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-4-
Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-8-
Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V + ++YL + H ++ N ++ V+V D G ++ V + + P
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS--DFGLSRYVLD-DEYTSSVGSKFPV 176
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 177 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 225
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
F + PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 174 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V + ++YL + H ++ N ++ V+V D G ++ V + + P
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS--DFGLSRYVLD-DEYTSSVGSKFPV 169
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 170 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 218
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
F + PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 167 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 124 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKLLGAEEKEYHAEG 180
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 33.5 bits (75), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+CV + G+ YL R L H ++ NV++ + + VK+ D G + + H
Sbjct: 126 WCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGRAKLLGAEEKEYHAEG 182
Query: 1010 TPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
P ++ A E + Q+DVWS GV + L++ G+ P+ G
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|3V2A|R Chain R, Vegfr-2VEGF-A Complex Structure
Length = 772
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 907 IGDKLEMKCLAVGEPKPVIQWFK 929
IG+ +E+ C A G P P I WFK
Sbjct: 680 IGESIEVSCTASGNPPPQIMWFK 702
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V + ++YL + H ++ N ++ V+V D G ++ V + + P
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS--DFGLSRYVLD-DEYTSSVGSKFPV 185
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
F + PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
>pdb|3KVQ|A Chain A, Crystal Structure Of Vegfr2 Extracellular Domain D7
Length = 108
Score = 33.5 bits (75), Expect = 0.88, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 907 IGDKLEMKCLAVGEPKPVIQWFK 929
IG+ +E+ C A G P P I WFK
Sbjct: 24 IGESIEVSCTASGNPPPQIMWFK 46
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.88, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPE 1056
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 33.1 bits (74), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL---GTLIHPINTP 1011
V + ++YL H ++ NV+++ +V D G T+ + G L P+
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS--DFGLTKEASSTQDTGKL--PV--- 169
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPF 1049
++ APE L E ++DVWS G+L + + S G P+
Sbjct: 170 --KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.1 bits (74), Expect = 1.0, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPN 1012
++L+ + +H G+ H +++P N ++ +KLID G ++ T ++
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGT 175
Query: 1013 PEFAAPEVLAE-----------EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
+ PE + + I P++DVWS G + Y + G +PF+
Sbjct: 176 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.1 bits (74), Expect = 1.1, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI---HPINT 1010
++L+ + +H G+ H +++P N ++ +KLID G ++ T + + T
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGT 171
Query: 1011 PNPEFAAPEVLAE-----------EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
N + PE + + I P++DVWS G + Y + G +PF+
Sbjct: 172 VN--YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|3HBX|A Chain A, Crystal Structure Of Gad1 From Arabidopsis Thaliana
pdb|3HBX|B Chain B, Crystal Structure Of Gad1 From Arabidopsis Thaliana
pdb|3HBX|C Chain C, Crystal Structure Of Gad1 From Arabidopsis Thaliana
pdb|3HBX|D Chain D, Crystal Structure Of Gad1 From Arabidopsis Thaliana
pdb|3HBX|E Chain E, Crystal Structure Of Gad1 From Arabidopsis Thaliana
pdb|3HBX|F Chain F, Crystal Structure Of Gad1 From Arabidopsis Thaliana
Length = 502
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
C N++ L + E + F I+S+ G + SL S +TE++I+ +R+
Sbjct: 347 CRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRR 397
>pdb|3BFO|A Chain A, Crystal Structure Of Ig-Like C2-Type 2 Domain Of The Human
Mucosa-Associated Lymphoid Tissue Lymphoma Translocation
Protein 1
pdb|3BFO|B Chain B, Crystal Structure Of Ig-Like C2-Type 2 Domain Of The Human
Mucosa-Associated Lymphoid Tissue Lymphoma Translocation
Protein 1
pdb|3BFO|C Chain C, Crystal Structure Of Ig-Like C2-Type 2 Domain Of The Human
Mucosa-Associated Lymphoid Tissue Lymphoma Translocation
Protein 1
pdb|3BFO|D Chain D, Crystal Structure Of Ig-Like C2-Type 2 Domain Of The Human
Mucosa-Associated Lymphoid Tissue Lymphoma Translocation
Protein 1
Length = 91
Score = 33.1 bits (74), Expect = 1.1, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 899 KPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+P + ++ G L ++C+AVG P P QWFK
Sbjct: 9 EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFK 39
>pdb|2V9T|A Chain A, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 117
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 888 RRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
R++ P E P + V G+ + C A G P P I+W+K G
Sbjct: 4 RQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGG 47
>pdb|2IEP|A Chain A, Crystal Structure Of Immunoglobulin-Like Domains 1 And 2
Of The Receptor Tyrosine Kinase Musk
pdb|2IEP|B Chain B, Crystal Structure Of Immunoglobulin-Like Domains 1 And 2
Of The Receptor Tyrosine Kinase Musk
Length = 192
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
P PI + ++ G K + C +G PKP + W K G S L
Sbjct: 101 PKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIK-GDSAL 141
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 32.7 bits (73), Expect = 1.3, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN 1012
++L+ + +H G+ H +++P N ++ +KLID G Q +++
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGT 191
Query: 1013 PEFAAPEVLAE-----------EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
+ PE + + I P++DVWS G + Y + G +PF+
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.7 bits (73), Expect = 1.3, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPE 1056
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPE 1056
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With A Quinazolin Ligand Compound 4
Length = 342
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN 1012
++L+ + +H G+ H +++P N ++ +KLID G Q +++
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 1013 PEFAAPEVLAE-----------EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
+ PE + + I P++DVWS G + Y + G +PF+
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2YD9|A Chain A, Crystal Structure Of The N-Terminal Ig1-3 Module Of Human
Receptor Protein Tyrosine Phosphatase Sigma
Length = 304
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP F P++ ++ G + + C+AVG P P ++W +
Sbjct: 205 APRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQ 241
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPE 1056
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN 1012
++L+ + +H G+ H +++P N ++ +KLID G Q +++
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDTTSVVKDSQVGT 172
Query: 1013 PEFAAPEVLAE-----------EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
+ PE + + I P++DVWS G + Y + G +PF+
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|2V9Q|A Chain A, First And Second Ig Domains From Human Robo1
pdb|2V9R|A Chain A, First And Second Ig Domains From Human Robo1 (Form 2)
Length = 212
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 888 RRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
R++ P E P + V G+ + C A G P P I+W+K G
Sbjct: 4 RQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGG 47
Score = 30.8 bits (68), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 896 FREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLGT 932
FR+ P + V +G+ M+C G P+P I W K G+
Sbjct: 114 FRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGS 151
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
V V G++YL H ++ NV++ + ++ L R +
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPE 1056
++ APE + ++DVWS GVL + S G P+RG E
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of Activation
For Tec Family Kinases
Length = 283
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V + ++YL + H ++ N ++ V+V D G ++ V + + P
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS--DFGLSRYVLD-DEETSSVGSKFPV 185
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
Score = 30.0 bits (66), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
F + PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 159 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-- 216
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 217 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 265
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A+ K PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 211 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 265
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 179 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-- 236
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 237 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 285
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A+ K PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 231 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 285
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-- 210
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 211 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
Score = 30.4 bits (67), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A+ K PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|2EO9|A Chain A, Solution Structure Of The Fifth Ig-Like Domain From Human
Roundabout Homo1
Length = 118
Score = 32.3 bits (72), Expect = 1.8, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P R+ P+ V + + C+A G P P I W K G
Sbjct: 9 PVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDG 46
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-- 210
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 211 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A+ K PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 193 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV-- 250
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 251 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 299
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETR 1185
G+ KG A+ K PE E +TD WS GVL + + S G P+ +S E
Sbjct: 238 GYYRKG-GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296
Query: 1186 QNV 1188
+ V
Sbjct: 297 EFV 299
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-- 224
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 225 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A+ K PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 170 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV-- 227
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 228 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 276
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETR 1185
G+ KG A+ K PE E +TD WS GVL + + S G P+ +S E
Sbjct: 215 GYYRKG-GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 273
Query: 1186 QNV 1188
+ V
Sbjct: 274 EFV 276
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into
Receptor Autoregulation
Length = 343
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Query: 943 PTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
P + + C+ V G+ YL R H ++ N ++ ++ VK+ D G ++ +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG--ENMVVKIADFGLSRNIYSA 227
Query: 1002 GTLIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
N P + PE + ++DVW+ GV+ + + S G P+ G + E
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKLGTLIHPINT 1010
G++YL + H N+ NV++ V K+ D G ++ + T P+
Sbjct: 448 GMKYLEEKNFVHRNLAARNVLL--VNRHYAKISDFGLSKALGADDSYYTARSAGKWPL-- 503
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPET 1057
++ APE + ++DVWS GV + LS G P++ PE
Sbjct: 504 ---KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase
In Complex With Ch5424802
Length = 344
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 169 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-- 226
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 227 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 275
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A+ K PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 221 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 275
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-- 224
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 225 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A+ K PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 32.0 bits (71), Expect = 2.1, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 15/107 (14%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKLGTLIHPINT 1010
G++YL + H ++ NV++ V K+ D G ++ + T P+
Sbjct: 122 GMKYLEEKNFVHRDLAARNVLL--VNRHYAKISDFGLSKALGADDSYYTARSAGKWPL-- 177
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPE 1056
++ APE + ++DVWS GV + LS G P++ PE
Sbjct: 178 ---KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 953 TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
+ +G+ Y+ + H ++ NV+++ S+ K+ D G RV +
Sbjct: 116 AQIAEGMAYIERKNYIHRDLRAANVLVS--ESLMCKIADFGLA-RVIEDNEYTAREGAKF 172
Query: 1013 P-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQS 1053
P ++ APE + +++VWS G+L Y +++ G P+ G++
Sbjct: 173 PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRT 215
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 32.0 bits (71), Expect = 2.2, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 15/109 (13%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN 1012
++L+ + +H G+ H +++P N ++ +KLID G Q ++
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDG---MLKLIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 1013 PEFAAPEVLAE-----------EPIFPQTDVWSAGVLAYVLLSGASPFR 1050
+ PE + + I P++DVWS G + Y + G +PF+
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|2NZI|A Chain A, Crystal Structure Of Domains A168-A170 From Titin
pdb|2NZI|B Chain B, Crystal Structure Of Domains A168-A170 From Titin
Length = 305
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLC 936
AP F+E+ + V + C G PKP+++W++ G +
Sbjct: 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIA 47
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQV-KLIDLGCTQRV------TKLGTLIHPINT 1010
G QYL H +I N ++ +V K+ D G + + K G + P+
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV-- 224
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 225 ---KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 1135 SALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A+ K PE E +TD WS GVL + + S G P+ +S E + V
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,750,809
Number of Sequences: 62578
Number of extensions: 1898999
Number of successful extensions: 9485
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 452
Number of HSP's that attempted gapping in prelim test: 4947
Number of HSP's gapped (non-prelim): 3983
length of query: 1310
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1200
effective length of database: 8,089,757
effective search space: 9707708400
effective search space used: 9707708400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)