Query         psy5279
Match_columns 1310
No_of_seqs    1056 out of 4996
Neff          5.2 
Searched_HMMs 46136
Date          Fri Aug 16 22:28:47 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy5279.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5279hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0603|consensus              100.0 2.9E-49 6.3E-54  467.1   9.6  553  190-1233    1-566 (612)
  2 KOG0615|consensus              100.0 4.8E-45   1E-49  412.9  20.9  285  129-414   118-444 (475)
  3 KOG0033|consensus              100.0 9.9E-44 2.1E-48  380.4  13.0  263  594-1239    9-276 (355)
  4 KOG0032|consensus              100.0 4.7E-42   1E-46  400.4  12.0  291  583-1257   22-328 (382)
  5 KOG0615|consensus              100.0   2E-42 4.4E-47  391.6   2.9  163  949-1237  279-444 (475)
  6 KOG0605|consensus              100.0 7.4E-39 1.6E-43  372.6  21.7  151  180-332   138-291 (550)
  7 KOG0598|consensus              100.0 2.4E-38 5.2E-43  356.6   8.9  256  182-479    24-286 (357)
  8 KOG0583|consensus              100.0 1.5E-37 3.2E-42  361.8   8.9  258  592-1235   13-280 (370)
  9 KOG0595|consensus              100.0 1.3E-36 2.8E-41  345.2  16.2  203  180-404     7-217 (429)
 10 KOG0575|consensus              100.0 1.6E-36 3.5E-41  357.6  17.2  226  183-410    18-272 (592)
 11 KOG0575|consensus              100.0 1.9E-37 4.2E-42  365.4   8.7  256  591-1233   13-272 (592)
 12 KOG0599|consensus              100.0 5.8E-37 1.3E-41  332.2   9.9  262  594-1234   15-287 (411)
 13 KOG0659|consensus              100.0 4.8E-36   1E-40  325.4  13.9  224  183-414     2-288 (318)
 14 KOG0604|consensus              100.0 1.7E-36 3.6E-41  332.5   7.2  273  583-1237   48-329 (400)
 15 KOG0600|consensus              100.0 1.1E-35 2.3E-40  343.8  13.9  196  181-398   115-317 (560)
 16 KOG0616|consensus              100.0   4E-36 8.6E-41  329.8   7.7  238  181-462    42-283 (355)
 17 KOG0607|consensus              100.0 3.5E-36 7.6E-41  331.5   6.7  280  848-1263   57-398 (463)
 18 KOG0032|consensus              100.0 3.5E-35 7.5E-40  342.9  15.0  232  179-411    31-297 (382)
 19 KOG0593|consensus              100.0 1.3E-35 2.8E-40  326.1   9.8  174  183-362     2-177 (396)
 20 KOG0663|consensus              100.0 1.4E-34   3E-39  321.3  12.0  222  182-411    75-365 (419)
 21 KOG0595|consensus              100.0 2.8E-35 6.2E-40  334.4   6.3  261  593-1109    7-275 (429)
 22 KOG0593|consensus              100.0 2.5E-34 5.4E-39  316.0  12.5  111  948-1061  103-214 (396)
 23 KOG0588|consensus              100.0 1.2E-34 2.5E-39  342.4  10.4  153  948-1233  114-266 (786)
 24 KOG0661|consensus              100.0 1.1E-34 2.3E-39  333.6   6.6  193  180-381     7-224 (538)
 25 KOG0583|consensus              100.0 1.5E-33 3.3E-38  328.3  14.6  170  180-350    14-190 (370)
 26 KOG0605|consensus              100.0 1.7E-33 3.7E-38  328.0  14.3  279  858-1237  165-452 (550)
 27 KOG0592|consensus              100.0 5.1E-34 1.1E-38  332.0   9.5  227  181-410    71-341 (604)
 28 KOG0694|consensus              100.0 3.2E-33 6.9E-38  332.8  15.6  234  857-1237  391-631 (694)
 29 cd05612 STKc_PRKX_like Catalyt 100.0 1.4E-33   3E-38  314.1  11.5   98  951-1054  106-203 (291)
 30 KOG0597|consensus              100.0 1.3E-33 2.9E-38  327.6  11.6  253  596-1109    2-258 (808)
 31 KOG0598|consensus              100.0 3.5E-33 7.5E-38  315.1  14.6  234  857-1110   48-289 (357)
 32 KOG0599|consensus              100.0 1.5E-34 3.2E-39  313.6   2.7  229  180-410    14-286 (411)
 33 cd05610 STKc_MASTL Catalytic d 100.0 2.9E-31 6.3E-36  330.3  32.1  166  182-349     3-172 (669)
 34 KOG0581|consensus              100.0   1E-32 2.2E-37  311.5  14.1  228  182-414    78-342 (364)
 35 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.1E-33 4.5E-38  311.9   8.4  106  949-1057  106-212 (288)
 36 KOG0616|consensus              100.0   9E-33 1.9E-37  303.6  13.0  227  859-1109   69-304 (355)
 37 KOG0033|consensus              100.0 2.4E-34 5.3E-39  308.5   0.2  232  180-411     8-271 (355)
 38 KOG0590|consensus              100.0   1E-33 2.2E-38  346.9   4.5  152  182-334    19-177 (601)
 39 cd07848 STKc_CDKL5 Catalytic d 100.0 1.1E-32 2.3E-37  303.7  11.7  106  949-1056  103-208 (287)
 40 KOG0581|consensus              100.0 4.5E-33 9.7E-38  314.3   8.5   99  949-1052  181-280 (364)
 41 KOG0588|consensus              100.0 2.8E-32 6.1E-37  322.4  15.3  167  182-350    11-180 (786)
 42 KOG0611|consensus              100.0 8.8E-33 1.9E-37  310.8   9.5  203  178-403    48-255 (668)
 43 KOG0594|consensus              100.0 4.2E-32 9.1E-37  305.7  14.7  175  182-363    10-197 (323)
 44 KOG0592|consensus              100.0   3E-32 6.5E-37  317.3  13.8  233  871-1110   98-346 (604)
 45 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.6E-32 3.5E-37  309.2  10.7  105  949-1055  106-214 (338)
 46 KOG0585|consensus              100.0 7.7E-33 1.7E-37  317.8   6.7  164  946-1235  210-377 (576)
 47 PTZ00263 protein kinase A cata 100.0 1.2E-32 2.5E-37  312.9   7.4   98  950-1053  122-219 (329)
 48 cd07862 STKc_CDK6 Catalytic do 100.0 4.5E-32 9.9E-37  299.2  11.4  105  949-1057  113-217 (290)
 49 KOG0585|consensus              100.0 1.9E-31 4.2E-36  306.4  15.2  238  180-421    94-386 (576)
 50 cd05571 STKc_PKB Catalytic dom 100.0 2.3E-32   5E-37  309.4   7.4  102  949-1053   98-199 (323)
 51 cd07869 STKc_PFTAIRE1 Catalyti 100.0   5E-32 1.1E-36  302.5   9.3  102  949-1053  106-208 (303)
 52 cd07853 STKc_NLK Catalytic dom 100.0   2E-31 4.3E-36  307.5  13.5  107  949-1057  106-213 (372)
 53 KOG0694|consensus              100.0 6.1E-32 1.3E-36  321.9   9.5  268  182-508   367-642 (694)
 54 KOG0580|consensus              100.0 2.7E-32 5.9E-37  293.1   5.5  152  949-1235  127-278 (281)
 55 KOG0660|consensus              100.0   1E-31 2.3E-36  302.3  10.2  112  948-1061  127-240 (359)
 56 PTZ00426 cAMP-dependent protei 100.0 4.3E-32 9.3E-37  311.1   7.1  100  949-1054  134-233 (340)
 57 KOG0578|consensus              100.0   4E-31 8.7E-36  310.2  14.7  103  948-1053  371-473 (550)
 58 cd05585 STKc_YPK1_like Catalyt 100.0 9.8E-32 2.1E-36  302.5   9.2  101  950-1053   97-197 (312)
 59 KOG0660|consensus              100.0 2.6E-31 5.7E-36  299.1  12.5  176  180-360    19-201 (359)
 60 cd07875 STKc_JNK1 Catalytic do 100.0 2.9E-31 6.2E-36  304.9  12.9  106  950-1059  130-235 (364)
 61 KOG4717|consensus              100.0 1.7E-31 3.7E-36  306.6  10.7  210  894-1235   63-275 (864)
 62 KOG4236|consensus              100.0 4.7E-31   1E-35  303.6  13.7  234  180-413   559-825 (888)
 63 PHA03212 serine/threonine kina 100.0 1.8E-31 3.9E-36  312.3  10.4  101  950-1052  186-286 (391)
 64 cd07863 STKc_CDK4 Catalytic do 100.0 3.7E-31 7.9E-36  291.3  11.4  105  948-1056  110-214 (288)
 65 cd05614 STKc_MSK2_N N-terminal 100.0 9.1E-32   2E-36  304.6   6.8   99  950-1050  109-208 (332)
 66 cd07874 STKc_JNK3 Catalytic do 100.0 6.6E-31 1.4E-35  300.6  13.6  105  949-1057  122-226 (355)
 67 PTZ00036 glycogen synthase kin 100.0 2.5E-31 5.4E-36  315.5   9.9  107  948-1057  172-279 (440)
 68 KOG0580|consensus              100.0 1.1E-31 2.4E-36  288.4   6.1  227  182-411    21-277 (281)
 69 cd05599 STKc_NDR_like Catalyti 100.0 1.7E-31 3.6E-36  306.1   7.7  159  949-1109  104-303 (364)
 70 cd07868 STKc_CDK8 Catalytic do 100.0 6.2E-31 1.3E-35  294.7  11.8  106  948-1053  110-220 (317)
 71 cd07876 STKc_JNK2 Catalytic do 100.0 5.8E-31 1.3E-35  301.9  11.4  103  950-1056  127-229 (359)
 72 PTZ00284 protein kinase; Provi 100.0 4.8E-31   1E-35  314.4  11.0  107  949-1059  234-355 (467)
 73 cd05587 STKc_cPKC Catalytic do 100.0 4.2E-31 9.2E-36  298.9   9.5  103  949-1054  104-206 (324)
 74 cd05593 STKc_PKB_gamma Catalyt 100.0 4.4E-31 9.6E-36  300.2   8.8  102  949-1053   98-199 (328)
 75 KOG0600|consensus              100.0 1.1E-30 2.4E-35  302.5  12.0  112  948-1061  220-332 (560)
 76 cd05628 STKc_NDR1 Catalytic do 100.0 4.7E-31   1E-35  303.7   8.9  159  949-1110  104-301 (363)
 77 cd05590 STKc_nPKC_eta Catalyti 100.0 7.9E-31 1.7E-35  296.9  10.5  102  950-1054  100-201 (320)
 78 cd06649 PKc_MEK2 Catalytic dom 100.0 1.5E-30 3.3E-35  295.5  12.8  102  950-1056  107-209 (331)
 79 cd07878 STKc_p38beta_MAPK11 Ca 100.0   2E-30 4.4E-35  294.9  13.7  103  948-1056  120-223 (343)
 80 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.2E-31 1.1E-35  299.3   8.3  156  950-1108  105-291 (350)
 81 cd05584 STKc_p70S6K Catalytic  100.0 1.3E-30 2.8E-35  295.3  10.7  101  950-1053  104-204 (323)
 82 KOG0201|consensus              100.0   2E-30 4.3E-35  296.9  12.0  204  592-1052    9-214 (467)
 83 PTZ00267 NIMA-related protein  100.0 1.5E-30 3.3E-35  311.8  11.4  104  948-1053  171-275 (478)
 84 KOG0198|consensus              100.0 4.3E-30 9.3E-35  292.0  14.4  232  182-439    16-257 (313)
 85 cd07872 STKc_PCTAIRE2 Catalyti 100.0   1E-30 2.2E-35  292.8   8.9  106  949-1057  107-213 (309)
 86 cd05594 STKc_PKB_alpha Catalyt 100.0 4.9E-31 1.1E-35  298.5   5.8  102  949-1053   98-200 (325)
 87 cd05586 STKc_Sck1_like Catalyt 100.0 6.8E-31 1.5E-35  297.6   6.8  157  949-1237   99-260 (330)
 88 cd05631 STKc_GRK4 Catalytic do 100.0 8.7E-31 1.9E-35  290.5   7.3  101  949-1053  105-205 (285)
 89 cd05591 STKc_nPKC_epsilon Cata 100.0 2.3E-30 4.9E-35  292.6  10.2  103  950-1055  100-202 (321)
 90 KOG0604|consensus              100.0 1.1E-30 2.4E-35  286.9   7.2  231  179-415    57-330 (400)
 91 cd05629 STKc_NDR_like_fungal C 100.0 1.1E-30 2.3E-35  301.9   6.5  156  949-1107  104-310 (377)
 92 KOG0661|consensus              100.0 9.5E-30   2E-34  293.0  13.9  111  947-1061  111-222 (538)
 93 cd05616 STKc_cPKC_beta Catalyt 100.0 2.4E-30 5.3E-35  292.6   8.9  103  949-1054  104-206 (323)
 94 KOG0607|consensus              100.0 5.2E-30 1.1E-34  283.1  11.0  241  174-414    68-368 (463)
 95 cd05589 STKc_PKN Catalytic dom 100.0 2.5E-30 5.5E-35  292.6   8.8  103  949-1054  104-206 (324)
 96 cd05620 STKc_nPKC_delta Cataly 100.0 3.1E-30 6.7E-35  291.6   9.5  103  949-1054   99-201 (316)
 97 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-30 3.6E-35  301.5   6.9  157  949-1108  145-310 (370)
 98 cd05598 STKc_LATS Catalytic do 100.0   1E-30 2.2E-35  301.6   5.0  159  949-1109  104-308 (376)
 99 cd05615 STKc_cPKC_alpha Cataly 100.0 4.7E-30   1E-34  290.9  10.3  103  949-1054  104-206 (323)
100 cd07873 STKc_PCTAIRE1 Catalyti 100.0   3E-30 6.6E-35  287.5   8.6  105  949-1056  107-212 (301)
101 cd05625 STKc_LATS1 Catalytic d 100.0 1.6E-30 3.5E-35  300.9   6.2  159  949-1109  104-312 (382)
102 KOG0658|consensus              100.0 6.9E-30 1.5E-34  288.1  11.0  107  948-1057  127-234 (364)
103 cd05575 STKc_SGK Catalytic dom 100.0 2.6E-30 5.6E-35  292.4   7.5  103  949-1054   99-201 (323)
104 PHA03207 serine/threonine kina 100.0 7.2E-30 1.6E-34  297.7  11.4  104  949-1054  188-292 (392)
105 KOG0667|consensus              100.0 8.4E-30 1.8E-34  303.6  11.8  110  948-1061  291-400 (586)
106 PLN00034 mitogen-activated pro 100.0 9.8E-30 2.1E-34  291.4  11.7   90  589-683    67-158 (353)
107 cd05619 STKc_nPKC_theta Cataly 100.0 5.2E-30 1.1E-34  290.0   9.3  101  951-1054  101-201 (316)
108 KOG0597|consensus              100.0 5.7E-30 1.2E-34  297.7   9.4  164  183-349     2-168 (808)
109 KOG0591|consensus              100.0 1.5E-29 3.3E-34  276.4  12.0  141  950-1095  128-274 (375)
110 cd05626 STKc_LATS2 Catalytic d 100.0 3.4E-30 7.4E-35  298.7   7.5  157  949-1108  104-311 (381)
111 KOG0658|consensus              100.0 6.4E-30 1.4E-34  288.3   9.4  171  182-363    23-202 (364)
112 cd05592 STKc_nPKC_theta_delta  100.0   8E-30 1.7E-34  288.2  10.1  101  951-1054  101-201 (316)
113 cd05582 STKc_RSK_N N-terminal  100.0 2.4E-30 5.3E-35  291.7   5.8  100  949-1051  101-200 (318)
114 cd05596 STKc_ROCK Catalytic do 100.0 4.5E-30 9.8E-35  297.4   8.0  156  950-1108  146-310 (370)
115 cd05588 STKc_aPKC Catalytic do 100.0 5.7E-30 1.2E-34  291.0   8.4  100  949-1051   99-198 (329)
116 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.6E-30 7.7E-35  292.1   6.6  153  949-1107  104-262 (333)
117 cd05601 STKc_CRIK Catalytic do 100.0 2.3E-30 5.1E-35  292.9   5.0  157  950-1109  106-270 (330)
118 cd05597 STKc_DMPK_like Catalyt 100.0 6.6E-30 1.4E-34  290.7   8.6  158  949-1108  105-272 (331)
119 cd06650 PKc_MEK1 Catalytic dom 100.0 2.3E-29 5.1E-34  286.7  12.8  100  950-1054  107-207 (333)
120 cd05627 STKc_NDR2 Catalytic do 100.0 2.8E-30 6.2E-35  296.6   5.3  158  949-1109  104-300 (360)
121 KOG0586|consensus              100.0   5E-29 1.1E-33  294.7  15.9  232  180-413    53-312 (596)
122 cd05602 STKc_SGK1 Catalytic do 100.0 5.2E-30 1.1E-34  290.1   7.4  103  949-1054   99-201 (325)
123 KOG0662|consensus              100.0 1.1E-29 2.4E-34  262.8   9.0  206  183-396     2-237 (292)
124 cd05570 STKc_PKC Catalytic dom 100.0 1.1E-29 2.4E-34  287.1   9.7  102  949-1053   99-200 (318)
125 cd05623 STKc_MRCK_alpha Cataly 100.0 9.6E-30 2.1E-34  289.1   8.9  159  949-1109  105-273 (332)
126 cd07839 STKc_CDK5 Catalytic do 100.0 2.8E-29 6.1E-34  275.8  12.1  100  949-1051  102-202 (284)
127 KOG0611|consensus              100.0 1.3E-29 2.9E-34  285.3   9.4  250  596-1107   53-307 (668)
128 PTZ00263 protein kinase A cata 100.0 5.9E-29 1.3E-33  282.7  14.8  165  182-350    17-184 (329)
129 KOG0594|consensus              100.0 1.2E-29 2.6E-34  286.0   8.6  107  948-1057  122-229 (323)
130 cd05604 STKc_SGK3 Catalytic do 100.0 5.9E-30 1.3E-34  289.7   6.1  102  949-1053   99-200 (325)
131 cd05624 STKc_MRCK_beta Catalyt 100.0 6.9E-30 1.5E-34  290.5   6.5  159  949-1109  105-273 (331)
132 KOG4717|consensus              100.0 3.2E-29 6.9E-34  288.1  11.7  230  180-415    15-278 (864)
133 cd05608 STKc_GRK1 Catalytic do 100.0 1.8E-29 3.9E-34  279.4   9.2  102  948-1052   99-200 (280)
134 PHA03211 serine/threonine kina 100.0 1.9E-29 4.2E-34  301.7  10.1  101  949-1051  263-364 (461)
135 cd05618 STKc_aPKC_iota Catalyt 100.0 1.8E-29 3.8E-34  287.3   9.2   99  949-1050   99-197 (329)
136 cd05628 STKc_NDR1 Catalytic do 100.0 2.7E-28 5.8E-33  280.9  18.9  149  183-333     1-152 (363)
137 KOG0610|consensus              100.0 1.4E-28 2.9E-33  280.2  15.9  267  878-1235  123-397 (459)
138 KOG0690|consensus              100.0 4.4E-30 9.4E-35  283.6   3.6  243  181-465   166-413 (516)
139 cd05626 STKc_LATS2 Catalytic d 100.0 2.5E-28 5.5E-33  283.1  18.5  147  184-332     2-151 (381)
140 PTZ00283 serine/threonine prot 100.0   3E-29 6.4E-34  302.5  11.1  104  948-1053  145-249 (496)
141 cd05612 STKc_PRKX_like Catalyt 100.0 4.7E-29   1E-33  277.8  11.7  164  183-350     1-167 (291)
142 KOG0586|consensus              100.0   1E-29 2.3E-34  300.5   6.7  154  949-1235  158-311 (596)
143 cd06608 STKc_myosinIII_like Ca 100.0 2.6E-29 5.6E-34  272.3   9.3   92  593-685     3-97  (275)
144 cd05622 STKc_ROCK1 Catalytic d 100.0 1.5E-29 3.3E-34  293.4   7.8  157  950-1109  146-311 (371)
145 PHA03209 serine/threonine kina 100.0 2.4E-29 5.1E-34  289.6   9.0   97  949-1049  160-256 (357)
146 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-29 3.5E-34  285.4   7.5  102  949-1053   99-200 (321)
147 PHA03210 serine/threonine kina 100.0 3.1E-29 6.6E-34  302.5  10.3  100  949-1050  270-369 (501)
148 KOG0663|consensus              100.0   3E-29 6.5E-34  279.1   9.4  183  856-1060   98-289 (419)
149 cd07845 STKc_CDK10 Catalytic d 100.0 2.8E-29 6.2E-34  280.7   9.2  107  949-1058  111-218 (309)
150 cd05598 STKc_LATS Catalytic do 100.0 3.8E-28 8.3E-33  280.3  18.7  147  183-331     1-150 (376)
151 cd05571 STKc_PKB Catalytic dom 100.0 8.8E-29 1.9E-33  280.3  13.2  160  189-350     1-164 (323)
152 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8.9E-29 1.9E-33  272.6  12.6   88  596-688     1-90  (286)
153 KOG0578|consensus              100.0 4.8E-29 1.1E-33  292.8  10.8  226  179-411   269-527 (550)
154 KOG0591|consensus              100.0 8.7E-31 1.9E-35  286.0  -3.6  167  181-349    17-196 (375)
155 cd07850 STKc_JNK Catalytic dom 100.0   6E-29 1.3E-33  284.6  11.3  104  949-1056  121-224 (353)
156 cd05595 STKc_PKB_beta Catalyti 100.0 4.2E-29   9E-34  283.2   9.8  153  949-1107   98-256 (323)
157 PF00069 Pkinase:  Protein kina 100.0   1E-29 2.3E-34  273.7   4.5  101  949-1052  101-202 (260)
158 cd05625 STKc_LATS1 Catalytic d 100.0 9.9E-29 2.1E-33  286.1  12.8  147  184-332     2-151 (382)
159 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.4E-28 1.4E-32  269.5  18.7  149  182-333     4-154 (303)
160 KOG0198|consensus              100.0 4.7E-29   1E-33  283.6   9.6  152  898-1050   64-223 (313)
161 cd05599 STKc_NDR_like Catalyti 100.0 5.4E-28 1.2E-32  277.2  18.5  149  183-333     1-152 (364)
162 KOG0659|consensus              100.0 1.8E-28 3.8E-33  266.9  13.0  108  948-1058  103-211 (318)
163 cd05610 STKc_MASTL Catalytic d 100.0 2.8E-29   6E-34  312.6   7.8   95 1141-1235  545-639 (669)
164 KOG0612|consensus              100.0 4.1E-29 8.9E-34  308.0   8.9  186  921-1110  150-346 (1317)
165 cd07855 STKc_ERK5 Catalytic do 100.0 1.4E-28 2.9E-33  279.3  12.1  106  949-1056  110-219 (334)
166 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.6E-28 1.4E-32  273.6  17.7  163  183-349     1-166 (333)
167 cd06637 STKc_TNIK Catalytic do 100.0 8.3E-29 1.8E-33  270.0   9.9   97  592-689     2-101 (272)
168 cd07867 STKc_CDC2L6 Catalytic  100.0 7.3E-29 1.6E-33  277.1   9.8  106  948-1053  110-220 (317)
169 cd07832 STKc_CCRK Catalytic do 100.0 1.1E-28 2.4E-33  270.4  10.6  105  950-1056  103-208 (286)
170 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.9E-29 1.5E-33  281.9   9.1  100  949-1051   99-198 (327)
171 cd05593 STKc_PKB_gamma Catalyt 100.0 3.7E-28   8E-33  276.4  14.7  160  189-350     1-164 (328)
172 KOG0582|consensus              100.0   9E-28   2E-32  275.1  17.5  230  180-411    23-297 (516)
173 cd05621 STKc_ROCK2 Catalytic d 100.0   6E-28 1.3E-32  280.2  16.3  168  181-351    41-213 (370)
174 cd05585 STKc_YPK1_like Catalyt 100.0 2.9E-28 6.3E-33  274.4  12.9  158  191-350     1-162 (312)
175 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.7E-27 3.8E-32  264.6  18.8  148  183-333     5-154 (288)
176 cd05629 STKc_NDR_like_fungal C 100.0 1.5E-27 3.2E-32  275.8  18.8  148  183-332     1-151 (377)
177 cd07860 STKc_CDK2_3 Catalytic  100.0 3.5E-28 7.7E-33  267.1  13.0  104  949-1055  103-207 (284)
178 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.3E-28 2.7E-33  270.0   9.2  105  949-1056  103-208 (286)
179 cd07861 STKc_CDK1_euk Catalyti 100.0 1.5E-28 3.3E-33  269.7   9.8  105  948-1055  103-208 (285)
180 cd07865 STKc_CDK9 Catalytic do 100.0 2.2E-28 4.7E-33  271.1  11.2  106  949-1056  122-231 (310)
181 PTZ00426 cAMP-dependent protei 100.0 4.5E-28 9.7E-33  278.0  14.1  167  181-351    28-198 (340)
182 cd05627 STKc_NDR2 Catalytic do 100.0 7.3E-28 1.6E-32  276.7  15.9  149  183-333     1-152 (360)
183 cd05595 STKc_PKB_beta Catalyti  99.9 3.4E-28 7.4E-33  275.8  12.7  159  189-349     1-163 (323)
184 cd07848 STKc_CDKL5 Catalytic d  99.9 1.4E-27 3.1E-32  263.2  16.8  149  183-333     1-151 (287)
185 cd08529 STKc_FA2-like Catalyti  99.9 3.9E-28 8.4E-33  261.5  11.3  101  950-1053  105-205 (256)
186 cd05594 STKc_PKB_alpha Catalyt  99.9 9.8E-28 2.1E-32  271.7  15.1  160  189-350     1-165 (325)
187 cd06611 STKc_SLK_like Catalyti  99.9 1.5E-28 3.2E-33  270.0   8.2   92  593-689     2-94  (280)
188 cd05573 STKc_ROCK_NDR_like Cat  99.9 1.8E-27 3.9E-32  270.4  17.2  151  183-335     1-154 (350)
189 cd06615 PKc_MEK Catalytic doma  99.9 3.6E-28 7.9E-33  272.8  11.2  100  950-1054  103-203 (308)
190 KOG0610|consensus               99.9 6.8E-28 1.5E-32  274.5  13.4  241  183-427    77-414 (459)
191 cd08227 PK_STRAD_alpha Pseudok  99.9 4.2E-28   9E-33  274.6  11.5  104  949-1054  104-215 (327)
192 cd06644 STKc_STK10_LOK Catalyt  99.9 3.3E-28 7.1E-33  269.7  10.2   89  594-687    10-99  (292)
193 KOG0582|consensus               99.9 8.5E-28 1.8E-32  275.4  13.8  154  897-1052   73-235 (516)
194 cd06643 STKc_SLK Catalytic dom  99.9   2E-28 4.3E-33  269.7   8.4   88  595-687     4-92  (282)
195 cd05607 STKc_GRK7 Catalytic do  99.9   2E-28 4.2E-33  270.7   8.3  100  949-1052   98-197 (277)
196 cd06638 STKc_myosinIIIA Cataly  99.9 3.8E-28 8.2E-33  267.2  10.4   94  594-688    16-111 (286)
197 cd05631 STKc_GRK4 Catalytic do  99.9 1.6E-27 3.4E-32  264.5  15.3  163  185-349     2-169 (285)
198 cd05596 STKc_ROCK Catalytic do  99.9 1.7E-27 3.7E-32  276.0  16.3  166  182-350    42-212 (370)
199 KOG0579|consensus               99.9 7.3E-28 1.6E-32  281.0  12.9   87  593-684    29-116 (1187)
200 cd07841 STKc_CDK7 Catalytic do  99.9 6.8E-28 1.5E-32  267.1  11.8  104  950-1056  106-210 (298)
201 cd05601 STKc_CRIK Catalytic do  99.9 4.2E-27 9.1E-32  266.4  18.1  166  183-350     1-172 (330)
202 cd07844 STKc_PCTAIRE_like Cata  99.9 4.2E-28   9E-33  267.9   9.4  102  949-1053  106-208 (291)
203 cd06639 STKc_myosinIIIB Cataly  99.9 4.4E-28 9.4E-33  268.2   9.4   95  593-688    19-115 (291)
204 cd05588 STKc_aPKC Catalytic do  99.9 3.7E-27 7.9E-32  268.0  17.0  159  189-349     1-164 (329)
205 cd07834 STKc_MAPK Catalytic do  99.9 1.3E-27 2.8E-32  269.4  13.0  107  949-1057  106-215 (330)
206 cd07866 STKc_BUR1 Catalytic do  99.9 7.7E-28 1.7E-32  266.9  10.8  107  948-1056  117-234 (311)
207 cd05590 STKc_nPKC_eta Catalyti  99.9 1.8E-27 3.9E-32  269.6  13.9  160  189-350     1-165 (320)
208 PTZ00266 NIMA-related protein   99.9 2.5E-28 5.4E-33  308.6   7.4   93  594-689    11-106 (1021)
209 cd07849 STKc_ERK1_2_like Catal  99.9 7.8E-28 1.7E-32  273.3  10.5  104  949-1054  109-215 (336)
210 cd07851 STKc_p38 Catalytic dom  99.9 1.8E-27   4E-32  271.7  13.5  102  949-1056  121-223 (343)
211 cd07859 STKc_TDY_MAPK_plant Ca  99.9 6.1E-27 1.3E-31  264.0  17.4  147  184-333     1-154 (338)
212 cd05587 STKc_cPKC Catalytic do  99.9 2.7E-27 5.9E-32  268.0  14.5  165  184-350     1-170 (324)
213 cd07843 STKc_CDC2L1 Catalytic   99.9 8.9E-28 1.9E-32  266.0  10.4  106  949-1057  109-215 (293)
214 cd07837 STKc_CdkB_plant Cataly  99.9 1.1E-27 2.3E-32  264.8  10.9  107  948-1056  112-219 (295)
215 KOG4236|consensus               99.9 6.3E-28 1.4E-32  278.0   9.3  164  943-1237  661-826 (888)
216 cd05614 STKc_MSK2_N N-terminal  99.9 8.1E-27 1.8E-31  264.3  18.3  165  184-350     1-175 (332)
217 cd05622 STKc_ROCK1 Catalytic d  99.9 4.8E-27   1E-31  272.6  16.4  168  181-351    41-213 (371)
218 cd05584 STKc_p70S6K Catalytic   99.9 2.6E-27 5.6E-32  268.3  13.7  160  189-350     2-169 (323)
219 cd08223 STKc_Nek4 Catalytic do  99.9 2.2E-27 4.8E-32  256.2  12.4  102  949-1053  105-206 (257)
220 cd06636 STKc_MAP4K4_6 Catalyti  99.9 7.8E-28 1.7E-32  264.5   9.1   96  593-689    13-111 (282)
221 cd06642 STKc_STK25-YSK1 Cataly  99.9 1.5E-27 3.2E-32  262.1  11.2   99  950-1051  105-203 (277)
222 cd05597 STKc_DMPK_like Catalyt  99.9 1.2E-26 2.6E-31  264.1  19.0  164  183-348     1-170 (331)
223 cd05624 STKc_MRCK_beta Catalyt  99.9 4.5E-27 9.8E-32  267.5  15.4  165  183-349     1-171 (331)
224 cd05575 STKc_SGK Catalytic dom  99.9 4.8E-27   1E-31  265.8  15.4  160  189-350     1-165 (323)
225 cd06646 STKc_MAP4K5 Catalytic   99.9 8.9E-28 1.9E-32  261.6   9.0  100  949-1051  109-211 (267)
226 cd07842 STKc_CDK8_like Catalyt  99.9 1.6E-27 3.4E-32  265.4  11.2  108  948-1055  110-222 (316)
227 KOG1290|consensus               99.9 9.6E-26 2.1E-30  260.3  26.0  134  180-315    74-223 (590)
228 PLN00009 cyclin-dependent kina  99.9 9.6E-28 2.1E-32  265.8   9.4  104  950-1055  106-210 (294)
229 cd06610 STKc_OSR1_SPAK Catalyt  99.9 7.8E-28 1.7E-32  260.2   8.3  102  949-1052  105-210 (267)
230 cd05591 STKc_nPKC_epsilon Cata  99.9 3.2E-27 6.9E-32  267.0  13.5  160  189-350     1-165 (321)
231 cd05582 STKc_RSK_N N-terminal   99.9 3.5E-27 7.7E-32  266.0  13.8  161  189-351     2-168 (318)
232 cd06625 STKc_MEKK3_like Cataly  99.9 2.2E-27 4.8E-32  257.1  11.6  101  950-1052  108-210 (263)
233 cd06605 PKc_MAPKK Catalytic do  99.9 1.4E-27   3E-32  258.9   9.6   98  950-1052  104-202 (265)
234 cd06609 STKc_MST3_like Catalyt  99.9   2E-27 4.3E-32  260.3  10.9  101  949-1052  101-201 (274)
235 cd07846 STKc_CDKL2_3 Catalytic  99.9 3.2E-27   7E-32  259.3  12.6  104  950-1056  104-208 (286)
236 cd07831 STKc_MOK Catalytic dom  99.9   2E-27 4.3E-32  260.0  10.9  104  949-1057  103-207 (282)
237 cd05616 STKc_cPKC_beta Catalyt  99.9 6.1E-27 1.3E-31  264.9  15.2  165  184-350     1-170 (323)
238 cd05604 STKc_SGK3 Catalytic do  99.9 6.2E-27 1.3E-31  265.2  15.2  161  189-351     1-166 (325)
239 cd05580 STKc_PKA Catalytic dom  99.9 1.4E-27 3.1E-32  264.8   9.8   99  949-1053  104-202 (290)
240 PLN00034 mitogen-activated pro  99.9   7E-27 1.5E-31  267.9  15.8  161  183-349    74-236 (353)
241 PHA03212 serine/threonine kina  99.9 1.4E-26 3.1E-31  271.1  18.6  143  181-332    90-232 (391)
242 cd07833 STKc_CDKL Catalytic do  99.9 1.4E-27 3.1E-32  261.9   9.6  105  949-1055  103-208 (288)
243 cd05618 STKc_aPKC_iota Catalyt  99.9 1.3E-26 2.9E-31  263.7  17.9  160  189-350     1-165 (329)
244 KOG1035|consensus               99.9 2.1E-26 4.6E-31  286.2  21.0  102  945-1051  696-817 (1351)
245 KOG0690|consensus               99.9 2.5E-27 5.3E-32  262.0  11.4  232  857-1109  191-431 (516)
246 cd05630 STKc_GRK6 Catalytic do  99.9 7.4E-28 1.6E-32  267.5   7.3  100  949-1052  105-204 (285)
247 PTZ00036 glycogen synthase kin  99.9 1.1E-26 2.5E-31  275.8  17.8  162  181-348    64-237 (440)
248 cd06649 PKc_MEK2 Catalytic dom  99.9 2.1E-26 4.5E-31  261.8  19.2  150  182-333     4-155 (331)
249 cd05602 STKc_SGK1 Catalytic do  99.9 5.2E-27 1.1E-31  265.7  14.1  161  189-351     1-166 (325)
250 cd05118 STKc_CMGC Catalytic do  99.9   4E-27 8.7E-32  257.3  12.7  105  949-1056  101-206 (283)
251 PTZ00024 cyclin-dependent prot  99.9 1.9E-27 4.1E-32  269.4  10.1  106  949-1056  122-241 (335)
252 cd07854 STKc_MAPK4_6 Catalytic  99.9 2.7E-27 5.9E-32  270.2  11.4  108  948-1056  116-226 (342)
253 cd05620 STKc_nPKC_delta Cataly  99.9 4.7E-27   1E-31  265.7  13.0  160  189-350     1-165 (316)
254 cd07835 STKc_CDK1_like Catalyt  99.9 4.4E-27 9.6E-32  258.3  12.3  104  949-1055  102-206 (283)
255 cd05589 STKc_PKN Catalytic dom  99.9 4.9E-27 1.1E-31  265.9  12.9  163  185-350     1-170 (324)
256 KOG0612|consensus               99.9   9E-29 1.9E-33  305.0  -1.4  167  181-349    73-244 (1317)
257 cd05592 STKc_nPKC_theta_delta   99.9 7.1E-27 1.5E-31  264.3  13.9  160  189-350     1-165 (316)
258 cd05102 PTKc_VEGFR3 Catalytic   99.9 2.1E-27 4.6E-32  269.3   9.6  149  948-1100  176-328 (338)
259 KOG0192|consensus               99.9 1.6E-26 3.4E-31  268.6  17.1  161  186-349    44-212 (362)
260 KOG0666|consensus               99.9 7.4E-28 1.6E-32  265.6   5.5  181  181-364    22-217 (438)
261 cd06619 PKc_MKK5 Catalytic dom  99.9 2.3E-27   5E-32  261.7   9.3   97  950-1051   99-195 (279)
262 cd05619 STKc_nPKC_theta Cataly  99.9 1.2E-26 2.5E-31  262.8  15.1  159  189-349     1-164 (316)
263 cd07877 STKc_p38alpha_MAPK14 C  99.9 3.4E-27 7.4E-32  270.0  10.9  101  949-1055  123-224 (345)
264 cd07858 STKc_TEY_MAPK_plant Ca  99.9 4.9E-27 1.1E-31  267.2  11.9  103  949-1054  111-214 (337)
265 cd07857 STKc_MPK1 Catalytic do  99.9 4.9E-27 1.1E-31  266.4  11.8  106  949-1056  108-217 (332)
266 cd05570 STKc_PKC Catalytic dom  99.9   8E-27 1.7E-31  263.8  13.4  219  189-411     1-256 (318)
267 cd08220 STKc_Nek8 Catalytic do  99.9 5.1E-27 1.1E-31  252.8  11.3  102  949-1053  104-205 (256)
268 cd05603 STKc_SGK2 Catalytic do  99.9 1.1E-26 2.4E-31  262.3  14.4  160  189-350     1-165 (321)
269 cd07876 STKc_JNK2 Catalytic do  99.9 2.8E-26   6E-31  263.3  17.7  150  180-334    18-175 (359)
270 cd05605 STKc_GRK4_like Catalyt  99.9 2.3E-27   5E-32  263.2   8.5  159  949-1111  105-270 (285)
271 cd08225 STKc_Nek5 Catalytic do  99.9 7.2E-27 1.6E-31  251.8  11.9  103  949-1053  104-206 (257)
272 cd05605 STKc_GRK4_like Catalyt  99.9 1.6E-26 3.5E-31  256.5  14.8  149  184-334     1-154 (285)
273 PHA03390 pk1 serine/threonine-  99.9 3.1E-27 6.6E-32  260.2   9.0   97  950-1052  113-209 (267)
274 cd08217 STKc_Nek2 Catalytic do  99.9 7.9E-27 1.7E-31  251.1  11.9  102  949-1053  108-214 (265)
275 cd05581 STKc_PDK1 Catalytic do  99.9 6.4E-27 1.4E-31  254.8  11.3  103  949-1053  105-226 (280)
276 cd07872 STKc_PCTAIRE2 Catalyti  99.9 5.2E-26 1.1E-30  254.9  18.9  148  183-333     6-155 (309)
277 cd06646 STKc_MAP4K5 Catalytic   99.9 4.4E-26 9.5E-31  248.4  17.6  150  182-333     8-157 (267)
278 cd05586 STKc_Sck1_like Catalyt  99.9 2.2E-26 4.8E-31  260.9  15.8  159  191-351     1-166 (330)
279 cd05623 STKc_MRCK_alpha Cataly  99.9   6E-26 1.3E-30  258.1  18.9  200  183-401     1-208 (332)
280 PTZ00267 NIMA-related protein   99.9 1.7E-26 3.7E-31  276.9  15.0  169  180-350    64-240 (478)
281 cd07836 STKc_Pho85 Catalytic d  99.9   6E-27 1.3E-31  257.0  10.0  107  948-1057  102-209 (284)
282 cd06626 STKc_MEKK4 Catalytic d  99.9 1.5E-26 3.3E-31  250.3  13.0  101  950-1052  103-209 (264)
283 cd07862 STKc_CDK6 Catalytic do  99.9 7.1E-26 1.5E-30  250.0  18.5  164  183-349     1-177 (290)
284 cd06624 STKc_ASK Catalytic dom  99.9 7.5E-27 1.6E-31  254.9  10.6  100  949-1050  111-212 (268)
285 cd07870 STKc_PFTAIRE2 Catalyti  99.9   5E-27 1.1E-31  259.7   9.0  102  949-1053  106-208 (291)
286 cd06650 PKc_MEK1 Catalytic dom  99.9 5.7E-26 1.2E-30  259.0  17.8  150  182-333     4-155 (333)
287 KOG0579|consensus               99.9 8.1E-28 1.7E-32  280.6   2.4  230  181-412    30-294 (1187)
288 cd08216 PK_STRAD Pseudokinase   99.9 1.4E-26 3.1E-31  258.8  12.2  103  949-1053  104-214 (314)
289 cd07863 STKc_CDK4 Catalytic do  99.9   8E-26 1.7E-30  249.0  18.0  159  184-345     1-171 (288)
290 cd07830 STKc_MAK_like Catalyti  99.9 2.9E-26 6.2E-31  251.5  14.3  105  949-1057  102-207 (283)
291 cd05617 STKc_aPKC_zeta Catalyt  99.9 9.6E-26 2.1E-30  256.2  18.9  191  189-403     1-198 (327)
292 cd06645 STKc_MAP4K3 Catalytic   99.9 4.3E-26 9.2E-31  248.5  15.4  150  182-333     8-157 (267)
293 cd07874 STKc_JNK3 Catalytic do  99.9 4.4E-26 9.5E-31  261.0  16.2  164  180-348    14-185 (355)
294 cd05608 STKc_GRK1 Catalytic do  99.9 4.2E-26   9E-31  252.5  15.5  142  191-334     1-149 (280)
295 cd07880 STKc_p38gamma_MAPK12 C  99.9 1.1E-26 2.5E-31  265.5  11.3  101  949-1055  121-222 (343)
296 KOG4645|consensus               99.9 1.2E-27 2.5E-32  298.2   3.3  237  179-440  1231-1476(1509)
297 KOG0696|consensus               99.9 1.4E-26   3E-31  261.6  11.4  236  856-1110  371-614 (683)
298 cd07853 STKc_NLK Catalytic dom  99.9 3.2E-26 6.9E-31  264.3  14.7  147  184-333     1-154 (372)
299 cd08218 STKc_Nek1 Catalytic do  99.9 8.8E-27 1.9E-31  251.9   9.2   99  951-1052  106-204 (256)
300 cd07829 STKc_CDK_like Catalyti  99.9 5.5E-26 1.2E-30  248.2  15.4  106  949-1057  101-207 (282)
301 cd06917 STKc_NAK1_like Catalyt  99.9 1.1E-26 2.5E-31  254.3   9.8   99  950-1051  105-204 (277)
302 cd07878 STKc_p38beta_MAPK11 Ca  99.9 2.4E-26 5.2E-31  261.5  12.8  151  180-334    12-170 (343)
303 cd05615 STKc_cPKC_alpha Cataly  99.9 1.2E-25 2.7E-30  255.0  18.4  195  184-402     1-202 (323)
304 cd06630 STKc_MEKK1 Catalytic d  99.9 1.8E-26   4E-31  250.6  11.0  101  950-1051  107-210 (268)
305 PF00069 Pkinase:  Protein kina  99.9 9.1E-26   2E-30  243.2  16.2  162  185-348     1-165 (260)
306 cd06640 STKc_MST4 Catalytic do  99.9 1.2E-26 2.6E-31  255.3   9.5   99  951-1052  106-204 (277)
307 cd06645 STKc_MAP4K3 Catalytic   99.9 1.4E-26 2.9E-31  252.4   9.5  153  949-1104  109-267 (267)
308 cd07864 STKc_CDK12 Catalytic d  99.9 1.6E-26 3.5E-31  256.2  10.0  104  949-1054  119-223 (302)
309 cd07840 STKc_CDK9_like Catalyt  99.9 2.6E-26 5.6E-31  251.0  11.2  107  949-1057  103-210 (287)
310 KOG0608|consensus               99.9 3.9E-26 8.5E-31  267.5  13.2  236  859-1111  654-937 (1034)
311 cd05061 PTKc_InsR Catalytic do  99.9 1.9E-26 4.1E-31  255.6  10.1  103  949-1053  122-226 (288)
312 cd07875 STKc_JNK1 Catalytic do  99.9   2E-25 4.4E-30  256.6  18.7  164  180-348    21-192 (364)
313 cd05607 STKc_GRK7 Catalytic do  99.9 1.8E-25 3.9E-30  247.1  17.2  143  191-335     1-148 (277)
314 KOG4250|consensus               99.9 2.5E-26 5.4E-31  274.9  11.1  167  183-349    13-191 (732)
315 cd06625 STKc_MEKK3_like Cataly  99.9 1.3E-25 2.8E-30  243.3  15.7  150  183-334     2-156 (263)
316 cd05577 STKc_GRK Catalytic dom  99.9 1.4E-26 3.1E-31  254.7   8.4  100  949-1052   98-197 (277)
317 KOG0577|consensus               99.9 7.4E-27 1.6E-31  272.1   6.4  218  183-411    26-282 (948)
318 cd06619 PKc_MKK5 Catalytic dom  99.9 2.8E-25 6.1E-30  245.1  18.6  217  184-411     2-257 (279)
319 cd05104 PTKc_Kit Catalytic dom  99.9 1.5E-25 3.3E-30  260.2  17.0  151  947-1101  215-369 (375)
320 cd06641 STKc_MST3 Catalytic do  99.9 1.5E-26 3.2E-31  254.6   8.1   99  950-1051  105-203 (277)
321 cd06612 STKc_MST1_2 Catalytic   99.9   3E-26 6.5E-31  246.8  10.2  154  949-1105  102-256 (256)
322 cd05630 STKc_GRK6 Catalytic do  99.9 1.6E-25 3.6E-30  248.7  16.4  148  185-334     2-154 (285)
323 PLN03225 Serine/threonine-prot  99.9   1E-25 2.3E-30  275.8  16.3  100  949-1049  258-379 (566)
324 cd05106 PTKc_CSF-1R Catalytic   99.9 2.8E-26 6.1E-31  266.4  10.6  150  948-1100  214-366 (374)
325 cd07879 STKc_p38delta_MAPK13 C  99.9 3.9E-26 8.4E-31  260.7  11.6  100  949-1054  120-220 (342)
326 cd08226 PK_STRAD_beta Pseudoki  99.9 3.1E-26 6.7E-31  259.4  10.7  105  950-1056  105-217 (328)
327 cd06629 STKc_MAPKKK_Bck1_like   99.9 4.6E-26   1E-30  248.9  11.3  100  950-1051  112-214 (272)
328 cd05580 STKc_PKA Catalytic dom  99.9 1.1E-25 2.5E-30  249.6  14.4  150  183-334     1-153 (290)
329 PLN03224 probable serine/threo  99.9 1.5E-25 3.2E-30  270.4  16.4  181  948-1236  311-506 (507)
330 cd07868 STKc_CDK8 Catalytic do  99.9 2.5E-25 5.4E-30  249.6  17.1  144  188-334     6-164 (317)
331 cd06607 STKc_TAO Catalytic dom  99.9 8.6E-26 1.9E-30  252.9  13.2   98  949-1053  118-218 (307)
332 cd07847 STKc_CDKL1_4 Catalytic  99.9 3.6E-25 7.9E-30  242.7  17.8  151  183-335     1-153 (286)
333 KOG1187|consensus               99.9 1.4E-25   3E-30  261.1  15.3  169  181-352    73-249 (361)
334 cd07838 STKc_CDK4_6_like Catal  99.9 5.3E-26 1.2E-30  248.9  11.1  105  949-1057  110-214 (287)
335 cd06620 PKc_MAPKK_Byr1_like Ca  99.9 4.5E-26 9.7E-31  251.7  10.6   99  950-1053  107-206 (284)
336 cd06656 STKc_PAK3 Catalytic do  99.9 3.9E-25 8.4E-30  247.1  18.0  234  180-418    16-280 (297)
337 cd05609 STKc_MAST Catalytic do  99.9 3.1E-26 6.7E-31  256.3   9.0  157  951-1109  106-280 (305)
338 cd07852 STKc_MAPK15 Catalytic   99.9   8E-26 1.7E-30  256.7  12.6  106  950-1057  111-221 (337)
339 cd05574 STKc_phototropin_like   99.9 4.7E-26   1E-30  255.3  10.2  155  950-1107  107-294 (316)
340 cd06629 STKc_MAPKKK_Bck1_like   99.9 4.4E-25 9.5E-30  241.2  17.4  148  184-333     2-159 (272)
341 cd05632 STKc_GRK5 Catalytic do  99.9 2.4E-25 5.3E-30  247.0  15.6  148  185-334     2-154 (285)
342 KOG0201|consensus               99.9 1.1E-26 2.4E-31  266.2   5.0  229  182-412    12-268 (467)
343 KOG0197|consensus               99.9 1.5E-25 3.3E-30  262.7  14.5  146  185-334   208-355 (468)
344 KOG0589|consensus               99.9 3.6E-26 7.8E-31  266.9   9.2  167  182-350     3-175 (426)
345 cd08222 STKc_Nek11 Catalytic d  99.9 1.6E-25 3.4E-30  243.1  13.6  100  949-1052  109-208 (260)
346 KOG0614|consensus               99.9 4.6E-26   1E-30  262.8   9.9  225  861-1107  447-682 (732)
347 PHA03209 serine/threonine kina  99.9 3.1E-25 6.7E-30  255.5  16.8  141  183-332    66-207 (357)
348 KOG0614|consensus               99.9 6.7E-28 1.4E-32  277.8  -5.2  238  184-461   421-663 (732)
349 cd06613 STKc_MAP4K3_like Catal  99.9 5.7E-26 1.2E-30  245.5  10.1  153  949-1104  104-262 (262)
350 cd06615 PKc_MEK Catalytic doma  99.9 4.4E-25 9.6E-30  247.9  17.4  149  183-333     1-151 (308)
351 cd06654 STKc_PAK1 Catalytic do  99.9 3.5E-25 7.6E-30  247.4  16.4  234  180-418    17-281 (296)
352 cd05123 STKc_AGC Catalytic dom  99.9   2E-25 4.3E-30  239.7  13.7  102  949-1053   96-197 (250)
353 cd06655 STKc_PAK2 Catalytic do  99.9 4.4E-26 9.5E-31  255.0   8.9  156  949-1107  118-274 (296)
354 cd06628 STKc_MAPKKK_Byr2_like   99.9 2.1E-25 4.5E-30  242.6  13.8  148  184-333     1-157 (267)
355 cd05096 PTKc_DDR1 Catalytic do  99.9 4.5E-26 9.7E-31  254.5   8.8  150  948-1099  140-298 (304)
356 cd06643 STKc_SLK Catalytic dom  99.9   4E-25 8.6E-30  243.5  16.0  149  183-333     5-154 (282)
357 cd07873 STKc_PCTAIRE1 Catalyti  99.9 8.5E-25 1.8E-29  243.9  18.7  148  183-333     6-155 (301)
358 KOG0667|consensus               99.9   3E-25 6.5E-30  265.0  15.9  170  182-361   185-363 (586)
359 cd06616 PKc_MKK4 Catalytic dom  99.9 6.7E-26 1.5E-30  250.0   9.4  101  948-1052  109-213 (288)
360 PTZ00283 serine/threonine prot  99.9   2E-25 4.3E-30  269.4  14.1  169  180-350    29-214 (496)
361 cd05068 PTKc_Frk_like Catalyti  99.9 1.9E-25   4E-30  243.1  12.6  147  950-1100  107-255 (261)
362 cd06621 PKc_MAPKK_Pek1_like Ca  99.9   1E-25 2.2E-30  249.6  10.6  100  948-1052  107-206 (287)
363 PTZ00284 protein kinase; Provi  99.9 7.8E-25 1.7E-29  261.3  18.8  165  181-349   127-313 (467)
364 cd07832 STKc_CCRK Catalytic do  99.9 9.5E-25 2.1E-29  239.4  17.9  149  184-335     1-152 (286)
365 KOG0608|consensus               99.9 6.9E-26 1.5E-30  265.4   9.4  149  182-332   628-779 (1034)
366 KOG0577|consensus               99.9 1.3E-25 2.7E-30  261.9  11.5   98  949-1053  129-229 (948)
367 cd05632 STKc_GRK5 Catalytic do  99.9   5E-26 1.1E-30  252.5   7.8  160  948-1111  104-270 (285)
368 cd05102 PTKc_VEGFR3 Catalytic   99.9 4.2E-25 9.1E-30  250.6  15.3  150  182-333     6-225 (338)
369 cd06644 STKc_STK10_LOK Catalyt  99.9 7.2E-25 1.5E-29  243.1  16.8  150  181-332    10-160 (292)
370 cd06611 STKc_SLK_like Catalyti  99.9 3.6E-25 7.7E-30  243.3  14.3  150  182-333     4-154 (280)
371 cd06613 STKc_MAP4K3_like Catal  99.9 1.6E-24 3.6E-29  234.1  19.2  151  182-334     2-153 (262)
372 cd06630 STKc_MEKK1 Catalytic d  99.9   8E-25 1.7E-29  237.8  16.8  150  184-334     1-156 (268)
373 cd06652 STKc_MEKK2 Catalytic d  99.9 5.6E-25 1.2E-29  239.8  15.6  149  183-333     2-157 (265)
374 cd06637 STKc_TNIK Catalytic do  99.9 3.5E-25 7.5E-30  241.5  13.9  151  180-333     3-162 (272)
375 cd06654 STKc_PAK1 Catalytic do  99.9 7.4E-26 1.6E-30  252.8   8.7  154  951-1107  121-275 (296)
376 PHA03207 serine/threonine kina  99.9 6.1E-25 1.3E-29  256.4  16.7  147  180-334    89-237 (392)
377 KOG0669|consensus               99.9   3E-27 6.5E-32  254.9  -2.4  182  182-366    16-208 (376)
378 cd07861 STKc_CDK1_euk Catalyti  99.9 9.8E-25 2.1E-29  239.6  17.2  147  184-333     1-152 (285)
379 cd06659 STKc_PAK6 Catalytic do  99.9 1.9E-25 4.1E-30  250.0  11.8  158  950-1110  121-279 (297)
380 cd07856 STKc_Sty1_Hog1 Catalyt  99.9 1.1E-25 2.4E-30  256.2  10.0   99  950-1054  112-211 (328)
381 cd07844 STKc_PCTAIRE_like Cata  99.9 1.2E-24 2.7E-29  240.3  17.8  148  182-332     4-153 (291)
382 cd06655 STKc_PAK2 Catalytic do  99.9 5.1E-25 1.1E-29  246.4  15.0  242  181-427    17-289 (296)
383 cd07841 STKc_CDK7 Catalytic do  99.9 1.1E-24 2.3E-29  241.6  17.4  148  184-334     1-154 (298)
384 PHA02988 hypothetical protein;  99.9   7E-26 1.5E-30  252.4   7.8  144  951-1101  127-274 (283)
385 cd07850 STKc_JNK Catalytic dom  99.9 1.2E-24 2.5E-29  249.4  17.8  151  181-336    14-172 (353)
386 cd05049 PTKc_Trk Catalytic dom  99.9 3.3E-25 7.1E-30  242.7  12.5  150  948-1101  124-276 (280)
387 KOG4279|consensus               99.9 1.5E-25 3.4E-30  264.1  10.4  225  190-438   582-812 (1226)
388 cd05096 PTKc_DDR1 Catalytic do  99.9 1.2E-24 2.7E-29  242.9  17.2  151  182-334     4-190 (304)
389 KOG4279|consensus               99.9 5.5E-26 1.2E-30  267.8   6.6  352  897-1275  621-1009(1226)
390 cd06658 STKc_PAK5 Catalytic do  99.9   2E-25 4.3E-30  249.2  10.7  156  951-1109  123-279 (292)
391 cd07839 STKc_CDK5 Catalytic do  99.9 5.8E-25 1.3E-29  241.7  14.2  147  184-333     1-150 (284)
392 cd05578 STKc_Yank1 Catalytic d  99.9 1.9E-25 4.1E-30  242.2  10.2  150  949-1105  103-258 (258)
393 cd06656 STKc_PAK3 Catalytic do  99.9 8.6E-26 1.9E-30  252.4   7.6  154  951-1107  120-274 (297)
394 cd07870 STKc_PFTAIRE2 Catalyti  99.9 2.8E-24 6.1E-29  237.8  19.6  149  182-333     4-154 (291)
395 KOG0574|consensus               99.9 8.6E-27 1.9E-31  255.5  -0.8  228  180-411    30-287 (502)
396 cd05114 PTKc_Tec_Rlk Catalytic  99.9   2E-25 4.4E-30  242.1  10.0  147  950-1100  104-252 (256)
397 cd08221 STKc_Nek9 Catalytic do  99.9 1.9E-25 4.1E-30  241.5   9.6  152  949-1105  104-256 (256)
398 PTZ00266 NIMA-related protein   99.9 1.6E-24 3.5E-29  274.3  19.3  233  180-413    10-301 (1021)
399 cd06628 STKc_MAPKKK_Byr2_like   99.9 1.9E-25 4.1E-30  243.0   9.4  152  950-1105  110-267 (267)
400 cd06651 STKc_MEKK3 Catalytic d  99.9 1.7E-25 3.7E-30  244.4   9.1  153  951-1106  111-265 (266)
401 cd06652 STKc_MEKK2 Catalytic d  99.9 1.9E-25 4.2E-30  243.5   9.5  153  951-1106  111-265 (265)
402 cd06632 STKc_MEKK1_plant Catal  99.9   2E-24 4.3E-29  232.6  17.1  150  184-335     1-155 (258)
403 cd05054 PTKc_VEGFR Catalytic d  99.9 3.5E-25 7.6E-30  253.4  12.0  151  948-1102  175-329 (337)
404 cd06623 PKc_MAPKK_plant_like C  99.9 1.4E-25   3E-30  242.3   8.2  100  950-1052  103-203 (264)
405 cd06635 STKc_TAO1 Catalytic do  99.9 5.2E-25 1.1E-29  248.3  12.9   97  949-1052  128-227 (317)
406 KOG0986|consensus               99.9 9.2E-26   2E-30  258.4   6.8  199  183-418   185-388 (591)
407 cd06622 PKc_MAPKK_PBS2_like Ca  99.9 6.8E-25 1.5E-29  241.8  13.3  148  183-332     1-153 (286)
408 cd05578 STKc_Yank1 Catalytic d  99.9 1.1E-24 2.3E-29  236.3  14.5  150  184-335     1-153 (258)
409 cd06609 STKc_MST3_like Catalyt  99.9 1.1E-24 2.4E-29  238.6  14.8  150  183-335     1-151 (274)
410 cd06631 STKc_YSK4 Catalytic do  99.9 2.6E-25 5.7E-30  242.0   9.5  153  951-1105  107-265 (265)
411 cd06612 STKc_MST1_2 Catalytic   99.9 1.7E-24 3.7E-29  233.2  15.6  149  182-334     2-151 (256)
412 cd05613 STKc_MSK1_N N-terminal  99.9 2.5E-25 5.4E-30  246.1   9.3   99  950-1050  109-209 (290)
413 cd05072 PTKc_Lyn Catalytic dom  99.9 2.4E-25 5.3E-30  241.7   9.0  147  950-1100  107-255 (261)
414 KOG1989|consensus               99.9 1.2E-25 2.5E-30  275.2   7.2   85 1143-1232  222-309 (738)
415 cd05052 PTKc_Abl Catalytic dom  99.9 4.4E-25 9.5E-30  240.8  10.9  148  950-1101  108-257 (263)
416 cd05059 PTKc_Tec_like Catalyti  99.9 2.7E-25 5.8E-30  241.6   9.1  149  949-1101  103-253 (256)
417 cd05064 PTKc_EphR_A10 Catalyti  99.9 1.7E-25 3.6E-30  245.2   7.6  147  950-1100  111-259 (266)
418 cd06631 STKc_YSK4 Catalytic do  99.9 1.4E-24 3.1E-29  236.3  14.7  146  184-332     1-152 (265)
419 cd07865 STKc_CDK9 Catalytic do  99.9 2.7E-24 5.9E-29  238.5  17.1  151  181-334    10-171 (310)
420 cd06651 STKc_MEKK3 Catalytic d  99.9   2E-24 4.4E-29  236.0  15.9  148  184-333     3-157 (266)
421 cd06608 STKc_myosinIII_like Ca  99.9 2.1E-24 4.6E-29  234.0  15.6  151  181-334     4-165 (275)
422 cd05579 STKc_MAST_like Catalyt  99.9 7.4E-25 1.6E-29  235.8  12.0  154  950-1106   97-261 (265)
423 cd06633 STKc_TAO3 Catalytic do  99.9 7.8E-25 1.7E-29  246.8  12.7   98  949-1053  124-224 (313)
424 cd06624 STKc_ASK Catalytic dom  99.9 3.1E-24 6.7E-29  234.4  16.9  145  188-333    13-160 (268)
425 cd05048 PTKc_Ror Catalytic Dom  99.9 2.9E-25 6.3E-30  244.0   8.7  151  948-1102  126-279 (283)
426 cd08529 STKc_FA2-like Catalyti  99.9 1.7E-24 3.6E-29  233.3  14.2  150  184-335     1-154 (256)
427 cd07855 STKc_ERK5 Catalytic do  99.9 1.2E-24 2.5E-29  247.2  13.7  151  181-334     3-159 (334)
428 KOG0986|consensus               99.9 1.4E-24 3.1E-29  248.7  14.3  229  860-1110  211-454 (591)
429 cd06653 STKc_MEKK3_like_1 Cata  99.9 3.8E-25 8.2E-30  241.4   9.3  151  951-1104  111-263 (264)
430 cd07867 STKc_CDC2L6 Catalytic   99.9 4.1E-24   9E-29  239.0  17.8  144  188-334     6-164 (317)
431 cd06617 PKc_MKK3_6 Catalytic d  99.9 2.6E-24 5.6E-29  236.1  15.7  149  183-334     1-156 (283)
432 cd06639 STKc_myosinIIIB Cataly  99.9 3.3E-24 7.2E-29  237.3  16.3  151  180-333    19-179 (291)
433 cd07837 STKc_CdkB_plant Cataly  99.9   4E-24 8.7E-29  236.3  16.9  149  183-333     1-162 (295)
434 cd05098 PTKc_FGFR1 Catalytic d  99.9 3.7E-25 8.1E-30  247.8   8.5  151  948-1102  142-295 (307)
435 cd06626 STKc_MEKK4 Catalytic d  99.9 5.5E-24 1.2E-28  230.3  17.3  149  184-334     1-151 (264)
436 cd08220 STKc_Nek8 Catalytic do  99.9 9.4E-24   2E-28  227.5  18.9  151  184-335     1-155 (256)
437 cd08223 STKc_Nek4 Catalytic do  99.9 8.9E-24 1.9E-28  228.2  18.6  149  184-334     1-154 (257)
438 cd08221 STKc_Nek9 Catalytic do  99.9 6.5E-24 1.4E-28  229.6  17.6  149  184-334     1-153 (256)
439 cd07846 STKc_CDKL2_3 Catalytic  99.9 1.6E-24 3.6E-29  238.0  13.0  150  183-334     1-152 (286)
440 cd08219 STKc_Nek3 Catalytic do  99.9 2.8E-25 6.1E-30  240.5   6.8  148  949-1101  103-251 (255)
441 cd06617 PKc_MKK3_6 Catalytic d  99.9 5.5E-25 1.2E-29  241.4   9.1  156  948-1109  105-268 (283)
442 cd07833 STKc_CDKL Catalytic do  99.9 2.5E-24 5.5E-29  236.3  14.3  151  183-335     1-153 (288)
443 cd06610 STKc_OSR1_SPAK Catalyt  99.9   1E-23 2.3E-28  228.1  18.9  150  183-334     1-154 (267)
444 cd06638 STKc_myosinIIIA Cataly  99.9 4.9E-24 1.1E-28  234.6  16.5  152  180-334    15-176 (286)
445 cd06658 STKc_PAK5 Catalytic do  99.9 7.1E-25 1.5E-29  244.8  10.0  151  180-333    19-169 (292)
446 cd05079 PTKc_Jak1_rpt2 Catalyt  99.9 6.9E-25 1.5E-29  242.3   9.7   99  950-1050  113-213 (284)
447 PHA03211 serine/threonine kina  99.9 4.6E-24   1E-28  255.6  17.6  144  182-334   168-312 (461)
448 cd06634 STKc_TAO2 Catalytic do  99.9 9.4E-25   2E-29  245.3  10.8   97  949-1052  118-217 (308)
449 cd05148 PTKc_Srm_Brk Catalytic  99.9 1.1E-24 2.4E-29  236.1  11.0  146  950-1100  108-255 (261)
450 cd05583 STKc_MSK_N N-terminal   99.9 9.4E-25   2E-29  241.3  10.6  100  950-1051  109-210 (288)
451 cd07854 STKc_MAPK4_6 Catalytic  99.9 3.8E-24 8.3E-29  244.4  15.9  150  181-333     3-166 (342)
452 KOG0695|consensus               99.9   6E-25 1.3E-29  243.4   8.7  199  181-403   248-453 (593)
453 cd05574 STKc_phototropin_like   99.9   6E-24 1.3E-28  238.3  16.9  149  183-333     1-154 (316)
454 cd06623 PKc_MAPKK_plant_like C  99.9 9.7E-24 2.1E-28  228.0  17.9  150  183-334     1-152 (264)
455 cd06627 STKc_Cdc7_like Catalyt  99.9 6.7E-24 1.5E-28  227.5  16.4  150  184-335     1-152 (254)
456 cd00192 PTKc Catalytic domain   99.9 1.1E-24 2.5E-29  233.5  10.5  151  948-1102  107-260 (262)
457 cd08227 PK_STRAD_alpha Pseudok  99.9 5.8E-24 1.2E-28  240.9  16.7  143  187-331     2-150 (327)
458 cd05576 STKc_RPK118_like Catal  99.9 6.6E-25 1.4E-29  237.3   8.6   94  950-1049   89-182 (237)
459 PRK13184 pknD serine/threonine  99.9   1E-23 2.2E-28  266.1  20.5  148  183-332     2-163 (932)
460 cd07849 STKc_ERK1_2_like Catal  99.9 6.3E-24 1.4E-28  241.4  16.9  150  181-334     3-158 (336)
461 cd06647 STKc_PAK_I Catalytic d  99.9 6.2E-24 1.4E-28  237.0  16.6  236  181-421    17-283 (293)
462 cd08229 STKc_Nek7 Catalytic do  99.9 1.2E-24 2.6E-29  236.7  10.5  148  949-1100  109-259 (267)
463 cd07845 STKc_CDK10 Catalytic d  99.9 1.1E-23 2.5E-28  235.7  18.7  151  181-334     5-160 (309)
464 smart00219 TyrKc Tyrosine kina  99.9 1.8E-24 3.9E-29  232.4  11.7  149  949-1101  106-256 (258)
465 KOG0192|consensus               99.9 2.2E-24 4.7E-29  250.9  13.2  204  894-1100   85-297 (362)
466 cd07842 STKc_CDK8_like Catalyt  99.9 1.2E-23 2.6E-28  234.4  18.2  149  184-333     1-163 (316)
467 cd06642 STKc_STK25-YSK1 Cataly  99.9 1.4E-24 3.1E-29  238.5  10.6  149  183-334     4-153 (277)
468 cd06636 STKc_MAP4K4_6 Catalyti  99.9 4.3E-24 9.2E-29  235.0  14.3  150  181-333    14-172 (282)
469 cd06653 STKc_MEKK3_like_1 Cata  99.9 2.3E-23 4.9E-28  227.5  19.9  149  183-333     2-157 (264)
470 cd05062 PTKc_IGF-1R Catalytic   99.9 6.9E-25 1.5E-29  241.1   8.0  149  949-1101  122-273 (277)
471 cd06640 STKc_MST4 Catalytic do  99.9 5.1E-24 1.1E-28  234.5  14.8  149  183-334     4-153 (277)
472 cd06620 PKc_MAPKK_Byr1_like Ca  99.9 5.8E-24 1.3E-28  234.9  15.3  148  183-332     5-154 (284)
473 KOG0576|consensus               99.9 1.2E-25 2.6E-30  266.2   1.8  346  180-565    12-405 (829)
474 cd05116 PTKc_Syk Catalytic dom  99.9 1.8E-24   4E-29  235.1  10.9  147  950-1100   99-249 (257)
475 cd05090 PTKc_Ror1 Catalytic do  99.9 9.7E-25 2.1E-29  240.6   8.8  150  948-1101  126-278 (283)
476 cd05101 PTKc_FGFR2 Catalytic d  99.9 1.7E-24 3.7E-29  241.8  10.9  150  949-1102  140-292 (304)
477 cd05035 PTKc_Axl_like Catalyti  99.9 1.7E-24 3.7E-29  235.4  10.5  150  948-1101  115-267 (273)
478 cd07858 STKc_TEY_MAPK_plant Ca  99.9   5E-24 1.1E-28  242.6  14.6  151  181-334     3-160 (337)
479 cd05051 PTKc_DDR Catalytic dom  99.9 1.5E-24 3.3E-29  239.7  10.1  151  948-1100  132-291 (296)
480 cd05036 PTKc_ALK_LTK Catalytic  99.9 9.2E-25   2E-29  240.4   8.2  152  949-1102  119-274 (277)
481 cd05113 PTKc_Btk_Bmx Catalytic  99.9   1E-24 2.3E-29  237.7   8.5  148  950-1101  104-253 (256)
482 cd05611 STKc_Rim15_like Cataly  99.9 1.5E-24 3.1E-29  235.6   9.5  150  950-1106  101-255 (260)
483 cd06632 STKc_MEKK1_plant Catal  99.9 2.1E-24 4.5E-29  232.4  10.5  150  951-1105  107-258 (258)
484 cd06606 STKc_MAPKKK Catalytic   99.9 2.7E-23 5.8E-28  221.8  18.9  151  184-336     1-155 (260)
485 cd08217 STKc_Nek2 Catalytic do  99.9 5.7E-24 1.2E-28  229.0  13.8  150  184-335     1-163 (265)
486 cd06647 STKc_PAK_I Catalytic d  99.9 1.2E-24 2.6E-29  242.8   8.8  154  950-1107  119-274 (293)
487 cd06605 PKc_MAPKK Catalytic do  99.9 6.2E-24 1.4E-28  230.4  14.2  149  183-333     1-152 (265)
488 cd05572 STKc_cGK_PKG Catalytic  99.9 1.7E-24 3.6E-29  235.3   9.7  150  950-1106   97-256 (262)
489 cd08215 STKc_Nek Catalytic dom  99.9 8.6E-24 1.9E-28  226.2  14.8  150  184-335     1-156 (258)
490 KOG1989|consensus               99.9 5.3E-24 1.1E-28  260.8  14.8  204  183-403    37-260 (738)
491 cd05606 STKc_beta_ARK Catalyti  99.9 1.2E-24 2.6E-29  240.7   8.4  153  949-1109  100-262 (278)
492 cd05093 PTKc_TrkB Catalytic do  99.9   2E-24 4.2E-29  239.5  10.0  149  948-1100  122-273 (288)
493 cd05609 STKc_MAST Catalytic do  99.9 3.8E-24 8.3E-29  239.4  12.4  147  183-331     1-150 (305)
494 cd07843 STKc_CDC2L1 Catalytic   99.9 5.6E-24 1.2E-28  235.7  13.7  149  183-334     5-158 (293)
495 cd08218 STKc_Nek1 Catalytic do  99.9 1.8E-23 3.9E-28  226.1  17.1  149  184-334     1-153 (256)
496 cd05577 STKc_GRK Catalytic dom  99.9   7E-24 1.5E-28  233.4  14.2  141  191-333     1-146 (277)
497 KOG0596|consensus               99.9 1.1E-23 2.3E-28  246.2  16.3   91  931-1024  443-536 (677)
498 cd05104 PTKc_Kit Catalytic dom  99.9 8.2E-24 1.8E-28  245.8  15.4  151  182-334    34-266 (375)
499 cd05075 PTKc_Axl Catalytic dom  99.9 2.1E-24 4.5E-29  235.4   9.8  149  949-1101  115-266 (272)
500 cd07831 STKc_MOK Catalytic dom  99.9 1.9E-23   4E-28  228.8  17.3  147  185-335     1-152 (282)

No 1  
>KOG0603|consensus
Probab=100.00  E-value=2.9e-49  Score=467.14  Aligned_cols=553  Identities=23%  Similarity=0.340  Sum_probs=385.5

Q ss_pred             eecccCceEEEEEE---EcCCCcEEEEEEEecCCcch--HHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeEEEEEecCC
Q psy5279         190 ELGRGVTGIVYHAV---ERSSGRNYAAKVMTGKGNQY--KSLFKNELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAG  263 (1310)
Q Consensus       190 ~LG~GsFG~Vyka~---~k~Tg~~vAIKiI~~~~~~~--~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~lyLVmEy~~  263 (1310)
                      ++|+|+||+|+++.   -.+.|..||+|+..+.....  +.....|..++...+ ||.+|+++..|+++..+|++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            47999999998654   34678899999987654322  223456888899987 9999999999999999999999999


Q ss_pred             CCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCCccc
Q psy5279         264 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEY  343 (1310)
Q Consensus       264 GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~~~~  343 (1310)
                      ||+|+.++.....+++.+.+.+...++.|++++|+.+|+|||+|++||+++.+|  ++|+.|||++|........   ||
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~G--hi~~tdfglske~v~~~~~---cg  155 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEG--HIKLTDFGLSKEAVKEKIA---CG  155 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccC--ccccCCchhhhHhHhhhhc---cc
Confidence            999999999988999999999999999999999999999999999999998776  8999999999987654433   88


Q ss_pred             chHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCCCCCCCC
Q psy5279         344 DVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEP  423 (1310)
Q Consensus       344 t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp~~  423 (1310)
                      |..|++     |++.                   +-...+.|||+.             .+++.+.+++..||+..+...
T Consensus       156 t~eymA-----pEI~-------------------~gh~~a~D~ws~-------------gvl~felltg~~pf~~~~~~~  198 (612)
T KOG0603|consen  156 TYEYRA-----PEII-------------------NGHLSAADWWSF-------------GVLAFELLTGTLPFGGDTMKR  198 (612)
T ss_pred             chhhhh-----hHhh-------------------hccCCcccchhh-------------hhhHHHHhhCCCCCchHHHHH
Confidence            888775     4432                   113346898776             566666777777776633222


Q ss_pred             CCc-ceecccccccccccccccCCCCCCCcccc-cCCCCCCCCc--hhhHHHHhccCCCHHHHHHHHHHHHHHhhhhccC
Q psy5279         424 TPD-KVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL  499 (1310)
Q Consensus       424 ~p~-~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~~--el~~~~~~~~~~~e~~~~~~~~qi~~~~~y~H~~  499 (1310)
                      ++. +..++          .-+...+++++... --+++..-|.  +..+-|+++..|.--+-        .++.+--  
T Consensus       199 Il~~~~~~p----------~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~--------~~l~~r~--  258 (612)
T KOG0603|consen  199 ILKAELEMP----------RELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW--------NELEARS--  258 (612)
T ss_pred             HhhhccCCc----------hhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH--------hhHhhcC--
Confidence            222 11111          12223333333333 2233333333  45566666554321100        0111100  


Q ss_pred             CceecCCCCCCeEeccCCCCcEEEecccccchhccccccCCCCCCCCce-eEeechhhhhHHHHhhcCCccccCCCCCCC
Q psy5279         500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQY-KVAVTPAMKHLQAITEAGHTPTLAQDPPPL  578 (1310)
Q Consensus       500 ~i~hrDlkp~Nil~~~~~~~~ikl~DfG~a~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  578 (1310)
                        +|-=.||.=.                           ...-+..+.+ -..-||++.++----++.|++  ..+++-.
T Consensus       259 --~~~~fkp~~~---------------------------~e~~~~~fd~eft~~~P~dsp~~~~~~s~~~i--f~g~sfv  307 (612)
T KOG0603|consen  259 --RPPPFKPGSI---------------------------TERDVAQFDPEFTSQVPADSPLLSASGSDHTI--FSGPSFV  307 (612)
T ss_pred             --CCCCCCCccc---------------------------chhhhhhcCchhccCCcccCCCCCCCccccch--hcCCCcc
Confidence              0111122110                           0011111112 123456665543333333332  2333332


Q ss_pred             CCccccCCCccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhh-hhhhhchhhHHH
Q psy5279         579 NYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFD-NLRSLRHERIAS  657 (1310)
Q Consensus       579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  657 (1310)
                      .-++-..   =.+-|.++.|.|..+|-.|-||+|..|.-++ |..-.+.|+++-+.+   +.-.|-. .++--.|++|.+
T Consensus       308 a~~il~~---~~~~~~~~~y~~~~~~~~gs~s~~~~~~~~~-t~~~~~vkii~~~~~---~~~~e~~~~~~~~~h~niv~  380 (612)
T KOG0603|consen  308 APGVLED---AVTAPFTESYEFREELGEGSFSAVKYCESSP-TDQEPAVKIISKRAD---DNQDEIPISLLVRDHPNIVK  380 (612)
T ss_pred             ChHHhhc---cccCCcchhhccccccCCCCccceeeeeccc-cccchhheecccccc---ccccccchhhhhcCCCccee
Confidence            2222211   2345679999999999999999999999998 999999999988722   2223332 345557999999


Q ss_pred             HHHhcCCCCcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhh
Q psy5279         658 LLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQ  737 (1310)
Q Consensus       658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (1310)
                      ++.-|--.    -.+-+|||+++|.++|..+-+-.+                                            
T Consensus       381 ~~~v~~~~----~~~~~v~e~l~g~ell~ri~~~~~--------------------------------------------  412 (612)
T KOG0603|consen  381 SHDVYEDG----KEIYLVMELLDGGELLRRIRSKPE--------------------------------------------  412 (612)
T ss_pred             ecceecCC----ceeeeeehhccccHHHHHHHhcch--------------------------------------------
Confidence            99999887    567799999999987743211000                                            


Q ss_pred             hcccccccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCccccccccccc
Q psy5279         738 SANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLD  817 (1310)
Q Consensus       738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  817 (1310)
                                                                                                      
T Consensus       413 --------------------------------------------------------------------------------  412 (612)
T KOG0603|consen  413 --------------------------------------------------------------------------------  412 (612)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCcee
Q psy5279         818 TSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFR  897 (1310)
Q Consensus       818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffr  897 (1310)
                                                                                                      
T Consensus       413 --------------------------------------------------------------------------------  412 (612)
T KOG0603|consen  413 --------------------------------------------------------------------------------  412 (612)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcE
Q psy5279         898 EKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNV  977 (1310)
Q Consensus       898 E~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNI  977 (1310)
                                                                   .+ ..+..+++||+.|++|||++|||||||||+||
T Consensus       413 ---------------------------------------------~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NI  446 (612)
T KOG0603|consen  413 ---------------------------------------------FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNI  446 (612)
T ss_pred             ---------------------------------------------hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhhe
Confidence                                                         00 12456788999999999999999999999999


Q ss_pred             EEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279         978 VMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus       978 Ll~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      |++ +..++++|+|||.++.....  ..+      |                                            
T Consensus       447 L~~-~~~g~lrltyFG~a~~~~~~--~~t------p--------------------------------------------  473 (612)
T KOG0603|consen  447 LLD-GSAGHLRLTYFGFWSELERS--CDT------P--------------------------------------------  473 (612)
T ss_pred             eec-CCCCcEEEEEechhhhCchh--hcc------c--------------------------------------------
Confidence            996 23567999999987643211  000      0                                            


Q ss_pred             HhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCccc
Q psy5279        1058 RQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSAL 1137 (1310)
Q Consensus      1058 ~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~l 1137 (1310)
                                                                                                     .
T Consensus       474 -------------------------------------------------------------------------------~  474 (612)
T KOG0603|consen  474 -------------------------------------------------------------------------------A  474 (612)
T ss_pred             -------------------------------------------------------------------------------c
Confidence                                                                                           0


Q ss_pred             ccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChh-hhhhcccccccccccchhccCHHHHHHHHHhhhc
Q psy5279        1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKR 1216 (1310)
Q Consensus      1138 f~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~-e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~ 1216 (1310)
                      +...+.||||++..+|+++|||||+||++|+||+|.+||...... ++...|..++++     .+||.+|||||++||+.
T Consensus       475 ~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s-----~~vS~~AKdLl~~LL~~  549 (612)
T KOG0603|consen  475 LTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS-----ECVSDEAKDLLQQLLQV  549 (612)
T ss_pred             hhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc-----cccCHHHHHHHHHhccC
Confidence            122456888888889999999999999999999999999877655 777878777654     57999999999999999


Q ss_pred             CCCCCCCHHHhhcCCcc
Q psy5279        1217 APGKRPTVEECHENRWL 1233 (1310)
Q Consensus      1217 dP~kRpTa~e~L~HpWl 1233 (1310)
                      ||.+|||+.|++.|||+
T Consensus       550 dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  550 DPALRLGADEIGAHPWF  566 (612)
T ss_pred             ChhhCcChhhhccCcch
Confidence            99999999999999999


No 2  
>KOG0615|consensus
Probab=100.00  E-value=4.8e-45  Score=412.93  Aligned_cols=285  Identities=21%  Similarity=0.329  Sum_probs=218.9

Q ss_pred             ccccccccCCccccccccceeceeEEeeecCccc-ccchhcccccceecccCccCCCeeeeceecccCceEEEEEEEcCC
Q psy5279         129 PITDAYDFGDELGRGVTGTISHSVTVHVEDNENE-YSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSS  207 (1310)
Q Consensus       129 ~~~~~~~~g~~iG~G~~g~is~~~~i~v~~~~~~-~s~~~~~~~~~~~~~~~~~~d~Y~i~~~LG~GsFG~Vyka~~k~T  207 (1310)
                      +.+++..+.+.+|+|..-.+.+.+.+++..+... +.+....+. ......+.+.+.|.+.+.||+|+||.|.+|.++.|
T Consensus       118 S~nGT~VN~e~i~k~~~r~lkN~dei~is~p~~~~~v~~~~s~d-~~~~~pks~~d~yii~~~LGsGafg~Vkla~e~~t  196 (475)
T KOG0615|consen  118 SRNGTFVNDEMIGKGLSRILKNGDEISISIPALKIFVFEDLSRD-SSKVPPKSFNDYYIISKTLGSGAFGLVKLAYEKKT  196 (475)
T ss_pred             ccCcccccHhHhhccccccccCCCEEEeccchhheeeeecccch-hccCccchhcceeEeeeeecCCceeEEEEEEEccc
Confidence            3445566677778877766777776665433222 122221111 12223346889999999999999999999999999


Q ss_pred             CcEEEEEEEecCCcc-------hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCchHHHhhhcCCCCHH
Q psy5279         208 GRNYAAKVMTGKGNQ-------YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEY  280 (1310)
Q Consensus       208 g~~vAIKiI~~~~~~-------~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~  280 (1310)
                      |+.||||+++++...       ....+.+|++||++|+|||||+++++|+.++..|||||||+||+|++++...+.+.|.
T Consensus       197 gk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed  276 (475)
T KOG0615|consen  197 GKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLRED  276 (475)
T ss_pred             CcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccc
Confidence            999999999865321       1123579999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-CCCeEEEEeeccceeecCCCCCCCcccchHHHhhhcC------
Q psy5279         281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALR------  353 (1310)
Q Consensus       281 ~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-~~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~~~~r------  353 (1310)
                      ..+.+++|+|.||.|||++||+|||||||||||..+ ....+||+||||||.....+.++++||||.|+++...      
T Consensus       277 ~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~  356 (475)
T KOG0615|consen  277 LGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVE  356 (475)
T ss_pred             hhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCee
Confidence            999999999999999999999999999999999866 4568999999999999999999999999999986321      


Q ss_pred             -------------------CCccccCCCCCCCC--------CCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccC
Q psy5279         354 -------------------HPWLNFADRKPTED--------TPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYT  406 (1310)
Q Consensus       354 -------------------~P~l~~~~~~~~~~--------~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~  406 (1310)
                                         +.+++|++......        .-.+.+.++..+...+.|++...++=+..+|+++++.|.
T Consensus       357 ~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  357 YYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             cccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence                               12334443332110        011222333344455566666667777899999999999


Q ss_pred             CCcceecC
Q psy5279         407 HPSRMIYP  414 (1310)
Q Consensus       407 hpw~~~~~  414 (1310)
                      |||+...+
T Consensus       437 hpW~~~~~  444 (475)
T KOG0615|consen  437 HPWFKDAP  444 (475)
T ss_pred             Chhhhccc
Confidence            99985444


No 3  
>KOG0033|consensus
Probab=100.00  E-value=9.9e-44  Score=380.44  Aligned_cols=263  Identities=27%  Similarity=0.501  Sum_probs=225.0

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecc---cCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      -+|.|+.-.+|-.|-||||+.|..+- |+..+|||++.   ++....+.+..|-..-+.|.||+|..|++.|..-    .
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~-tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~----~   83 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE----S   83 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhcc-chHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc----c
Confidence            36789999999999999999999887 99999999985   4555777888999999999999999999999877    6


Q ss_pred             hhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccc
Q psy5279         671 IAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTW  750 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  750 (1310)
                      ..-||.|++.|+|+.--+-.|.-|||..+                                                   
T Consensus        84 ~~ylvFe~m~G~dl~~eIV~R~~ySEa~a---------------------------------------------------  112 (355)
T KOG0033|consen   84 FHYLVFDLVTGGELFEDIVAREFYSEADA---------------------------------------------------  112 (355)
T ss_pred             eeEEEEecccchHHHHHHHHHHHHHHHHH---------------------------------------------------
Confidence            77789999999999877777766665433                                                   


Q ss_pred             cCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcch
Q psy5279         751 EDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPV  830 (1310)
Q Consensus       751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  830 (1310)
                                                                                                      
T Consensus       113 --------------------------------------------------------------------------------  112 (355)
T KOG0033|consen  113 --------------------------------------------------------------------------------  112 (355)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCE
Q psy5279         831 IRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDK  910 (1310)
Q Consensus       831 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~  910 (1310)
                                                                                                      
T Consensus       113 --------------------------------------------------------------------------------  112 (355)
T KOG0033|consen  113 --------------------------------------------------------------------------------  112 (355)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEE
Q psy5279         911 LEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKL  989 (1310)
Q Consensus       911 l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL  989 (1310)
                                                            ..|++||++||.|||.+||||||+||+|+|+.++. ...|||
T Consensus       113 --------------------------------------SH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL  154 (355)
T KOG0033|consen  113 --------------------------------------SHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKL  154 (355)
T ss_pred             --------------------------------------HHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceee
Confidence                                                  33467999999999999999999999999998754 457999


Q ss_pred             EeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccccccc
Q psy5279         990 IDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069 (1310)
Q Consensus       990 ~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~ 1069 (1310)
                      +|||+|..+. .+. ......|||.|||||++                                                
T Consensus       155 ~~FGvAi~l~-~g~-~~~G~~GtP~fmaPEvv------------------------------------------------  184 (355)
T KOG0033|consen  155 ADFGLAIEVN-DGE-AWHGFAGTPGYLSPEVL------------------------------------------------  184 (355)
T ss_pred             cccceEEEeC-Ccc-ccccccCCCcccCHHHh------------------------------------------------
Confidence            9999998876 222 22233566666666654                                                


Q ss_pred             ccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccccchhhcc
Q psy5279        1070 YLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLA 1149 (1310)
Q Consensus      1070 ~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~ 1149 (1310)
                                                                                                     .
T Consensus       185 -------------------------------------------------------------------------------r  185 (355)
T KOG0033|consen  185 -------------------------------------------------------------------------------K  185 (355)
T ss_pred             -------------------------------------------------------------------------------h
Confidence                                                                                           3


Q ss_pred             cCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccc-cchhccCHHHHHHHHHhhhcCCCCCCCHHHhh
Q psy5279        1150 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECH 1228 (1310)
Q Consensus      1150 ~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L 1228 (1310)
                      ..+|+.++||||+|||+|+||+|++||++++...+++.|..+.|+++ ..|+.||++|||||+|||..||.+|+||.|+|
T Consensus       186 kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  186 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence            45688889999999999999999999999999999999999999997 48999999999999999999999999999999


Q ss_pred             cCCccCCchhH
Q psy5279        1229 ENRWLVPSEYM 1239 (1310)
Q Consensus      1229 ~HpWl~~~~~~ 1239 (1310)
                      +|||+-.-+.+
T Consensus       266 ~HpWi~~r~~~  276 (355)
T KOG0033|consen  266 KHPWICNRERV  276 (355)
T ss_pred             CCchhcchHHH
Confidence            99999766654


No 4  
>KOG0032|consensus
Probab=100.00  E-value=4.7e-42  Score=400.43  Aligned_cols=291  Identities=30%  Similarity=0.492  Sum_probs=249.6

Q ss_pred             ccCCCccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc----hhhhhhHHhhhhhhhc-hhhHHH
Q psy5279         583 EDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD----TLHQVNTEFDNLRSLR-HERIAS  657 (1310)
Q Consensus       583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~  657 (1310)
                      ......+..+.-.+.|+|..+|-||.||+|.+|.++. |+..+|+|.+.=.--    +...|..|...|+.|. |+||..
T Consensus        22 ~~~~~~~~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~-tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~  100 (382)
T KOG0032|consen   22 GLSILPPFSEDIKEKYELGRELGRGQFGVVYLCREKS-TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQ  100 (382)
T ss_pred             cccccccccccccccEEehhhhCCCCceEEEEEEecC-CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEE
Confidence            3333444566678899999999999999999999999 799999999975443    4578999999999999 999999


Q ss_pred             HHHhcCCCCcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhh
Q psy5279         658 LLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQ  737 (1310)
Q Consensus       658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (1310)
                      |.++|..+    +...||||+|.|++++.++..++ |||.+++.++                                  
T Consensus       101 l~~~~e~~----~~~~lvmEL~~GGeLfd~i~~~~-~sE~da~~~~----------------------------------  141 (382)
T KOG0032|consen  101 LKDAFEDP----DSVYLVMELCEGGELFDRIVKKH-YSERDAAGII----------------------------------  141 (382)
T ss_pred             EEEEEEcC----CeEEEEEEecCCchHHHHHHHcc-CCHHHHHHHH----------------------------------
Confidence            99999988    46789999999999999998885 8887766553                                  


Q ss_pred             hcccccccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCccccccccccc
Q psy5279         738 SANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLD  817 (1310)
Q Consensus       738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  817 (1310)
                                                                                                      
T Consensus       142 --------------------------------------------------------------------------------  141 (382)
T KOG0032|consen  142 --------------------------------------------------------------------------------  141 (382)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCcee
Q psy5279         818 TSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFR  897 (1310)
Q Consensus       818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffr  897 (1310)
                                                                                                      
T Consensus       142 --------------------------------------------------------------------------------  141 (382)
T KOG0032|consen  142 --------------------------------------------------------------------------------  141 (382)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcE
Q psy5279         898 EKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNV  977 (1310)
Q Consensus       898 E~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNI  977 (1310)
                                                                             +||+.|+.|||+.||+||||||||+
T Consensus       142 -------------------------------------------------------~~il~av~~lH~~gvvHrDlKpEN~  166 (382)
T KOG0032|consen  142 -------------------------------------------------------RQILEAVKYLHSLGVVHRDLKPENL  166 (382)
T ss_pred             -------------------------------------------------------HHHHHHHHHHHhCCceeccCCHHHe
Confidence                                                                   4899999999999999999999999


Q ss_pred             EEeecCC--CcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279         978 VMASVRS--VQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus       978 Ll~~~~~--~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      |+.....  ..+|++|||++..........  ..+|||.|+|||++.+                                
T Consensus       167 L~~~~~~~~~~ik~~DFGla~~~~~~~~~~--~~~Gtp~y~APEvl~~--------------------------------  212 (382)
T KOG0032|consen  167 LLASKDEGSGRIKLIDFGLAKFIKPGERLH--TIVGTPEYVAPEVLGG--------------------------------  212 (382)
T ss_pred             eeccccCCCCcEEEeeCCCceEccCCceEe--eecCCccccCchhhcC--------------------------------
Confidence            9987543  479999999998876522222  3356788888877532                                


Q ss_pred             HHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCc
Q psy5279        1056 ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPS 1135 (1310)
Q Consensus      1056 e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips 1135 (1310)
                                                                                                      
T Consensus       213 --------------------------------------------------------------------------------  212 (382)
T KOG0032|consen  213 --------------------------------------------------------------------------------  212 (382)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccc-cchhccCHHHHHHHHHhh
Q psy5279        1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIF 1214 (1310)
Q Consensus      1136 ~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~lL 1214 (1310)
                                     .+|+.++||||+|||+|+||||.+||+++++.++..+|..+++.|+ +.|..+|..|+|||++||
T Consensus       213 ---------------~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll  277 (382)
T KOG0032|consen  213 ---------------RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLL  277 (382)
T ss_pred             ---------------CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhc
Confidence                           3488899999999999999999999999999999999999999995 689999999999999999


Q ss_pred             hcCCCCCCCHHHhhcCCccCCc--------hhHHHHHHHHHHhhhhhhHhH
Q psy5279        1215 KRAPGKRPTVEECHENRWLVPS--------EYMIKKRERAVFLGNRLKEFS 1257 (1310)
Q Consensus      1215 ~~dP~kRpTa~e~L~HpWl~~~--------~~~~~~~~~~~~~~~~lk~~~ 1257 (1310)
                      ..||.+|+||+|+|+|||+...        +..+..+.+++..++++++++
T Consensus       278 ~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (382)
T KOG0032|consen  278 EFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLA  328 (382)
T ss_pred             ccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHH
Confidence            9999999999999999999653        335788888888888888875


No 5  
>KOG0615|consensus
Probab=100.00  E-value=2e-42  Score=391.64  Aligned_cols=163  Identities=24%  Similarity=0.476  Sum_probs=139.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-CCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++++|++.||.|||++||+||||||||||+..+ .+..+||+|||+|+......-  +...||||.|.|||++.+.++.
T Consensus       279 K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sf--m~TlCGTpsYvAPEVl~~kg~~  356 (475)
T KOG0615|consen  279 KLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSF--MKTLCGTPSYVAPEVLASKGVE  356 (475)
T ss_pred             HHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccccee--hhhhcCCccccChhheecCCee
Confidence            4568899999999999999999999999999875 457899999999998764333  3445678999999998754321


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                                                                                                      
T Consensus       357 --------------------------------------------------------------------------------  356 (475)
T KOG0615|consen  357 --------------------------------------------------------------------------------  356 (475)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhh-hhh
Q psy5279        1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE-TRQ 1186 (1310)
Q Consensus      1108 ~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e-~~~ 1186 (1310)
                                                                  .|..+|||||+|||+|++|||.+||.++..+. ..+
T Consensus       357 --------------------------------------------~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~e  392 (475)
T KOG0615|consen  357 --------------------------------------------YYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKE  392 (475)
T ss_pred             --------------------------------------------cccchheeeeccceEEEEeccCCCcccccCCccHHH
Confidence                                                        02257999999999999999999998886665 778


Q ss_pred             ccccccccc-ccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCCch
Q psy5279        1187 NVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237 (1310)
Q Consensus      1187 ~I~~~~~~f-~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~~~ 1237 (1310)
                      .|..++|.| |..|..||++|+|||.+||++||.+|||++|+|+||||...+
T Consensus       393 QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  393 QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            899999999 688999999999999999999999999999999999997655


No 6  
>KOG0605|consensus
Probab=100.00  E-value=7.4e-39  Score=372.60  Aligned_cols=151  Identities=27%  Similarity=0.446  Sum_probs=140.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .-.++|++++.||+|+||.||+|+.+.||..||+|++++....   ..+.++.|-.||...++|+||+|+..|++.+.+|
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            4568899999999999999999999999999999999876543   3345778999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |||||++||++...|.+.+.|+|..+++|+.+++.|++-||+.|+|||||||+|+||+..|  ||||+||||++.+
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G--HiKLSDFGLs~gl  291 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG--HIKLSDFGLSTGL  291 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC--CEeeccccccchh
Confidence            9999999999999999999999999999999999999999999999999999999999876  9999999999644


No 7  
>KOG0598|consensus
Probab=100.00  E-value=2.4e-38  Score=356.62  Aligned_cols=256  Identities=22%  Similarity=0.374  Sum_probs=208.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .++|+++++||+|+||+||+++.++|++.||+|+++++..   +..+...+|..||..++||+||+|+..|++++.+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            4789999999999999999999999999999999987643   3345678999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFGK  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~~~  337 (1310)
                      +||+.||+|+..+.+++.|+|..++.|+.+|+.||.|||++||||||||||||||+.+|  +|+|+||||+|... ....
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--Hi~LtDFgL~k~~~~~~~~  181 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--HIKLTDFGLCKEDLKDGDA  181 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC--cEEEeccccchhcccCCCc
Confidence            99999999999999999999999999999999999999999999999999999999876  99999999999654 4446


Q ss_pred             CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCC
Q psy5279         338 LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGT  417 (1310)
Q Consensus       338 l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~  417 (1310)
                      ..++|||+.|++     |++....                 -|+.+.|||+.             .++...++++.||+.
T Consensus       182 t~tfcGT~eYmA-----PEil~~~-----------------gy~~~vDWWsL-------------GillYeML~G~pPF~  226 (357)
T KOG0598|consen  182 TRTFCGTPEYMA-----PEILLGK-----------------GYDKAVDWWSL-------------GILLYEMLTGKPPFY  226 (357)
T ss_pred             cccccCCccccC-----hHHHhcC-----------------CCCcccchHhH-------------HHHHHHHhhCCCCCc
Confidence            677999999986     5554222                 27778999888             777788888999988


Q ss_pred             CCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCCCC--chhhHHHHhccCCCH
Q psy5279         418 QFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPG--GELLHSLTRQSYYTE  479 (1310)
Q Consensus       418 ~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~--~el~~~~~~~~~~~e  479 (1310)
                      +.....+-++|+-.+    .......+...+.+++..+ ..+++++-|  ++.-+ |+++..|..
T Consensus       227 ~~~~~~~~~~I~~~k----~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~-ik~HpfF~~  286 (357)
T KOG0598|consen  227 AEDVKKMYDKILKGK----LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEE-IKRHPFFKG  286 (357)
T ss_pred             CccHHHHHHHHhcCc----CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHH-hhcCccccc
Confidence            888665544431111    1123334666667777776 778888876  33333 666655543


No 8  
>KOG0583|consensus
Probab=100.00  E-value=1.5e-37  Score=361.84  Aligned_cols=258  Identities=28%  Similarity=0.452  Sum_probs=213.2

Q ss_pred             CCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC-----c-chhhhhhHHhhhhhhhc-hhhHHHHHHhcCC
Q psy5279         592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS-----H-DTLHQVNTEFDNLRSLR-HERIASLLEAYKP  664 (1310)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  664 (1310)
                      .....+|.+-..|-.|-||.|..|.... |+..||+|++...     . ....++.+|..+++.++ |+||..|+|-+..
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~-t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t   91 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAKHRL-TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT   91 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEeeecc-CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence            3456799999999999999999988777 7899999987774     1 34567778999999999 9999999999988


Q ss_pred             CCcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccc
Q psy5279         665 STTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANL  744 (1310)
Q Consensus       665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  744 (1310)
                      ++.    ..+|||||.|.|++.|+.++...+|.                                               
T Consensus        92 ~~~----~~ivmEy~~gGdL~~~i~~~g~l~E~-----------------------------------------------  120 (370)
T KOG0583|consen   92 PTK----IYIVMEYCSGGDLFDYIVNKGRLKED-----------------------------------------------  120 (370)
T ss_pred             CCe----EEEEEEecCCccHHHHHHHcCCCChH-----------------------------------------------
Confidence            843    88999999999999988765444331                                               


Q ss_pred             cccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCC
Q psy5279         745 RDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHL  824 (1310)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  824 (1310)
                                                                                                      
T Consensus       121 --------------------------------------------------------------------------------  120 (370)
T KOG0583|consen  121 --------------------------------------------------------------------------------  120 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeee
Q psy5279         825 DWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIP  904 (1310)
Q Consensus       825 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~  904 (1310)
                                                                                                      
T Consensus       121 --------------------------------------------------------------------------------  120 (370)
T KOG0583|consen  121 --------------------------------------------------------------------------------  120 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCC
Q psy5279         905 VVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS  984 (1310)
Q Consensus       905 l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~  984 (1310)
                                                                .++.+|+||++|++|||++||+||||||||||++... 
T Consensus       121 ------------------------------------------~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~-  157 (370)
T KOG0583|consen  121 ------------------------------------------EARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE-  157 (370)
T ss_pred             ------------------------------------------HHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC-
Confidence                                                      2456688999999999999999999999999999753 


Q ss_pred             CcEEEEeeccceee-ccCCcccccCCCCCCcccccccccCCC-CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc
Q psy5279         985 VQVKLIDLGCTQRV-TKLGTLIHPINTPNPEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062 (1310)
Q Consensus       985 ~~VKL~DFGlAk~~-~~~g~~~~~~~tGtp~Y~APEvl~~~~-ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~ 1062 (1310)
                      ..+||+|||++... ...+...+  .+|||.|+|||++.+.. |+                                   
T Consensus       158 ~~~Kl~DFG~s~~~~~~~~~l~t--~cGsp~Y~aPEvl~~~~~Y~-----------------------------------  200 (370)
T KOG0583|consen  158 GNLKLSDFGLSAISPGEDGLLKT--FCGSPAYAAPEVLSGKGTYS-----------------------------------  200 (370)
T ss_pred             CCEEEeccccccccCCCCCcccC--CCCCcccCCHHHhCCCCCcC-----------------------------------
Confidence            67999999999876 23333333  45779999999886543 22                                   


Q ss_pred             cccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccc
Q psy5279        1063 FVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKE 1142 (1310)
Q Consensus      1063 ~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~ 1142 (1310)
                                                                                                      
T Consensus       201 --------------------------------------------------------------------------------  200 (370)
T KOG0583|consen  201 --------------------------------------------------------------------------------  200 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhcc-CHHHHHHHHHhhhcCCCCC
Q psy5279        1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL-TQEATRFLMLIFKRAPGKR 1221 (1310)
Q Consensus      1143 qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~i-S~eAkdfI~~lL~~dP~kR 1221 (1310)
                                 +.++||||+|||+|+||+|..||...+...++..|..+.+.+|.   .+ |.+|++||++||..||.+|
T Consensus       201 -----------g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~---~~~S~~~~~Li~~mL~~~P~~R  266 (370)
T KOG0583|consen  201 -----------GKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS---YLLSPEARSLIEKMLVPDPSTR  266 (370)
T ss_pred             -----------CchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC---CcCCHHHHHHHHHHcCCCcccC
Confidence                       34577778888888888888888777777777788888888874   45 9999999999999999999


Q ss_pred             CCHHHhhcCCccCC
Q psy5279        1222 PTVEECHENRWLVP 1235 (1310)
Q Consensus      1222 pTa~e~L~HpWl~~ 1235 (1310)
                      +|+.|+++||||..
T Consensus       267 ~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  267 ITLLEILEHPWFQK  280 (370)
T ss_pred             CCHHHHhhChhhcc
Confidence            99999999999987


No 9  
>KOG0595|consensus
Probab=100.00  E-value=1.3e-36  Score=345.19  Aligned_cols=203  Identities=26%  Similarity=0.472  Sum_probs=174.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ...+.|.+.++||+|+||+||+|+++.++..||||.|.++  ..+..+.+..||.||+.|+|||||+|++++++++.+||
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l   86 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL   86 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence            3457899999999999999999999999999999999876  34566778899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-CC---CeEEEEeeccceeec
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GG---RHLLLTDFGLSRRIT  333 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-~~---~~VKLsDFGLAr~i~  333 (1310)
                      |||||.||+|.+++.+.+.++|..++.++.||+.||++||+++||||||||+||||+.. .+   ..+||+|||+||...
T Consensus        87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~  166 (429)
T KOG0595|consen   87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ  166 (429)
T ss_pred             EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence            99999999999999999999999999999999999999999999999999999999865 32   579999999999999


Q ss_pred             CCCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCCc
Q psy5279         334 SFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNSC  404 (1310)
Q Consensus       334 ~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~c  404 (1310)
                      +...+.++||+|-|++     |++.-                 ..-|+.=.| | +|..+-...++++|.+.+
T Consensus       167 ~~~~a~tlcGSplYMA-----PEV~~-----------------~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  167 PGSMAETLCGSPLYMA-----PEVIM-----------------SQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             chhHHHHhhCCccccC-----HHHHH-----------------hccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence            9888999999999987     34321                 011333355 5 555555556666666655


No 10 
>KOG0575|consensus
Probab=100.00  E-value=1.6e-36  Score=357.63  Aligned_cols=226  Identities=26%  Similarity=0.390  Sum_probs=190.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC---CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~---~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+|+..+.||+|+|+.||++++..||+.||+|+|.++   +...++.+.+||+|.+.|+|||||+++++|++.+.+|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            6799999999999999999999999999999999874   3456788999999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l  338 (1310)
                      |+|..|+|.+.+.+.+.++|.+++.|++||+.||.|||+++|||||||..||||+.  +.+|||+|||||..+... +.-
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~--~~~VKIgDFGLAt~le~~~Erk  175 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE--NMNVKIGDFGLATQLEYDGERK  175 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC--cCcEEecccceeeeecCccccc
Confidence            99999999999998888999999999999999999999999999999999999975  458999999999999855 566


Q ss_pred             CCcccchHHHhhhc----CCCc----cccCCCC--CCCCCCCcchhhhhhhcc---------------cchhhchhhhhh
Q psy5279         339 NPLEYDVRYVRQAL----RHPW----LNFADRK--PTEDTPKLNTDALRNYYN---------------LYKDWYGNAAVR  393 (1310)
Q Consensus       339 ~~~~~t~~yv~~~~----r~P~----l~~~~~~--~~~~~p~~~~~~~~~~~~---------------~~~D~~~~~~l~  393 (1310)
                      .++||||.|+++..    +|.|    +..|-..  -+.-.|+|+...+++.|+               .++|.+...+-+
T Consensus       176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~  255 (592)
T KOG0575|consen  176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRP  255 (592)
T ss_pred             ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcC
Confidence            78999999987431    1111    1111111  123347787777766554               235666666666


Q ss_pred             hcccCCCCCCccCCCcc
Q psy5279         394 RYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       394 ~~~~r~~~~~cl~hpw~  410 (1310)
                      +...|+++++++.|+|.
T Consensus       256 ~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  256 NPSERPSLDEVLDHPFF  272 (592)
T ss_pred             CcccCCCHHHHhcCHhh
Confidence            78899999999999997


No 11 
>KOG0575|consensus
Probab=100.00  E-value=1.9e-37  Score=365.38  Aligned_cols=256  Identities=25%  Similarity=0.464  Sum_probs=219.1

Q ss_pred             cCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeeccc----CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCC
Q psy5279         591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPST  666 (1310)
Q Consensus       591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  666 (1310)
                      ++|....|.--.-|-+|-|+-+.++...+ |++.||+|+++-    .+-+...|.+|.+..|+|.|+||..+..-+..+ 
T Consensus        13 ~D~~~~~Y~~g~~LGkGgFA~cYe~~~~~-tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs-   90 (592)
T KOG0575|consen   13 EDPRSKRYKRGRFLGKGGFARCYEARDLD-TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS-   90 (592)
T ss_pred             ecCCcceeeeeeeeccCcceEEEEEEEcC-CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC-
Confidence            44545566666667789999999876555 999999999997    888899999999999999999999999988887 


Q ss_pred             cccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccc
Q psy5279         667 TASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRD  746 (1310)
Q Consensus       667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  746 (1310)
                         +..-+|+|+|.-..+..++-.|...||-+                                                
T Consensus        91 ---~nVYivLELC~~~sL~el~Krrk~ltEpE------------------------------------------------  119 (592)
T KOG0575|consen   91 ---NNVYIVLELCHRGSLMELLKRRKPLTEPE------------------------------------------------  119 (592)
T ss_pred             ---CceEEEEEecCCccHHHHHHhcCCCCcHH------------------------------------------------
Confidence               77788999999888888777666666654                                                


Q ss_pred             cccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCC
Q psy5279         747 VKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDW  826 (1310)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  826 (1310)
                                                                                                      
T Consensus       120 --------------------------------------------------------------------------------  119 (592)
T KOG0575|consen  120 --------------------------------------------------------------------------------  119 (592)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeee
Q psy5279         827 KAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVV  906 (1310)
Q Consensus       827 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~  906 (1310)
                                                                                                      
T Consensus       120 --------------------------------------------------------------------------------  119 (592)
T KOG0575|consen  120 --------------------------------------------------------------------------------  119 (592)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCc
Q psy5279         907 IGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ  986 (1310)
Q Consensus       907 ~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~  986 (1310)
                                                               ++|+++||+.||.|||++||||||||..|++++.  +.+
T Consensus       120 -----------------------------------------ary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~--~~~  156 (592)
T KOG0575|consen  120 -----------------------------------------ARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE--NMN  156 (592)
T ss_pred             -----------------------------------------HHHHHHHHHHHHHHHHhcCceecccchhheeecC--cCc
Confidence                                                     4556679999999999999999999999999985  668


Q ss_pred             EEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccc
Q psy5279         987 VKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066 (1310)
Q Consensus       987 VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~ 1066 (1310)
                      |||+|||+|..+...+. .....+|||.|.||||+...                                          
T Consensus       157 VKIgDFGLAt~le~~~E-rk~TlCGTPNYIAPEVl~k~------------------------------------------  193 (592)
T KOG0575|consen  157 VKIGDFGLATQLEYDGE-RKKTLCGTPNYIAPEVLNKS------------------------------------------  193 (592)
T ss_pred             EEecccceeeeecCccc-ccceecCCCcccChhHhccC------------------------------------------
Confidence            99999999988865433 23345678999999886432                                          


Q ss_pred             cccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccccchh
Q psy5279        1067 RFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146 (1310)
Q Consensus      1067 ~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPE 1146 (1310)
                                                                                                      
T Consensus       194 --------------------------------------------------------------------------------  193 (592)
T KOG0575|consen  194 --------------------------------------------------------------------------------  193 (592)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHH
Q psy5279        1147 VLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEE 1226 (1310)
Q Consensus      1147 Vl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e 1226 (1310)
                           .++..|||||+||++|+||+|.|||...+-++|+..|...+|.+|   ..+|.+|+|||.+||.+||.+|||+++
T Consensus       194 -----gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P---~~ls~~A~dLI~~lL~~~P~~Rpsl~~  265 (592)
T KOG0575|consen  194 -----GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP---SHLSAEAKDLIRKLLRPNPSERPSLDE  265 (592)
T ss_pred             -----CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc---cccCHHHHHHHHHHhcCCcccCCCHHH
Confidence                 355678999999999999999999999999999999999999998   489999999999999999999999999


Q ss_pred             hhcCCcc
Q psy5279        1227 CHENRWL 1233 (1310)
Q Consensus      1227 ~L~HpWl 1233 (1310)
                      +|.|+||
T Consensus       266 vL~h~Ff  272 (592)
T KOG0575|consen  266 VLDHPFF  272 (592)
T ss_pred             HhcCHhh
Confidence            9999999


No 12 
>KOG0599|consensus
Probab=100.00  E-value=5.8e-37  Score=332.20  Aligned_cols=262  Identities=22%  Similarity=0.412  Sum_probs=222.3

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcch---------hhhhhHHhhhhhhh-chhhHHHHHHhcC
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT---------LHQVNTEFDNLRSL-RHERIASLLEAYK  663 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~  663 (1310)
                      -..+|.=-.++-||--|||+.|..|+ |+...|||++.....+         +.+-.+|.+.||.+ -||+|..|+..|.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~-t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKE-TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcc-cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            34566667789999999999999999 9999999999764332         34567899999986 5999999999999


Q ss_pred             CCCcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccc
Q psy5279         664 PSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTAN  743 (1310)
Q Consensus       664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (1310)
                      ++    ....||.|.+.-.++..||.|.-..||.+-                                            
T Consensus        94 s~----sF~FlVFdl~prGELFDyLts~VtlSEK~t--------------------------------------------  125 (411)
T KOG0599|consen   94 SD----AFVFLVFDLMPRGELFDYLTSKVTLSEKET--------------------------------------------  125 (411)
T ss_pred             Cc----chhhhhhhhcccchHHHHhhhheeecHHHH--------------------------------------------
Confidence            88    678899999999999999977655554332                                            


Q ss_pred             ccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCC
Q psy5279         744 LRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGH  823 (1310)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  823 (1310)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (411)
T KOG0599|consen  126 --------------------------------------------------------------------------------  125 (411)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceee
Q psy5279         824 LDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITI  903 (1310)
Q Consensus       824 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~  903 (1310)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (411)
T KOG0599|consen  126 --------------------------------------------------------------------------------  125 (411)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC
Q psy5279         904 PVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR  983 (1310)
Q Consensus       904 ~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~  983 (1310)
                                                                   +.+++|+++|++|||.++||||||||+|||+++  
T Consensus       126 ---------------------------------------------R~iMrqlfegVeylHa~~IVHRDLKpENILldd--  158 (411)
T KOG0599|consen  126 ---------------------------------------------RRIMRQLFEGVEYLHARNIVHRDLKPENILLDD--  158 (411)
T ss_pred             ---------------------------------------------HHHHHHHHHHHHHHHHhhhhhcccChhheeecc--
Confidence                                                         334679999999999999999999999999986  


Q ss_pred             CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcc
Q psy5279         984 SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063 (1310)
Q Consensus       984 ~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~ 1063 (1310)
                      +.++||+|||+|+++.+.......|  |||.|.|||.+...-|                                     
T Consensus       159 n~~i~isDFGFa~~l~~GekLrelC--GTPgYLAPEtikC~m~-------------------------------------  199 (411)
T KOG0599|consen  159 NMNIKISDFGFACQLEPGEKLRELC--GTPGYLAPETIKCSMY-------------------------------------  199 (411)
T ss_pred             ccceEEeccceeeccCCchhHHHhc--CCCcccChhheeeecc-------------------------------------
Confidence            5679999999999987766655544  6799999998742200                                     


Q ss_pred             ccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCccccccccc
Q psy5279        1064 VRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQ 1143 (1310)
Q Consensus      1064 ~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~q 1143 (1310)
                                                                .                                    .
T Consensus       200 ------------------------------------------e------------------------------------~  201 (411)
T KOG0599|consen  200 ------------------------------------------E------------------------------------N  201 (411)
T ss_pred             ------------------------------------------c------------------------------------C
Confidence                                                      0                                    0


Q ss_pred             chhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccc-cchhccCHHHHHHHHHhhhcCCCCCC
Q psy5279        1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRP 1222 (1310)
Q Consensus      1144 APEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~lL~~dP~kRp 1222 (1310)
                            -.+|+..||+|++|||||.||.|++||+-...--.+..|..++|.|. +.|.++|.++||||+++|++||.+|.
T Consensus       202 ------~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ri  275 (411)
T KOG0599|consen  202 ------HPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRI  275 (411)
T ss_pred             ------CCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcc
Confidence                  12488999999999999999999999999888888999999999994 68999999999999999999999999


Q ss_pred             CHHHhhcCCccC
Q psy5279        1223 TVEECHENRWLV 1234 (1310)
Q Consensus      1223 Ta~e~L~HpWl~ 1234 (1310)
                      |++|||.||||.
T Consensus       276 take~LaHpff~  287 (411)
T KOG0599|consen  276 TAKEALAHPFFI  287 (411)
T ss_pred             cHHHHhcChHHH
Confidence            999999999993


No 13 
>KOG0659|consensus
Probab=100.00  E-value=4.8e-36  Score=325.43  Aligned_cols=224  Identities=25%  Similarity=0.404  Sum_probs=187.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|...+.||+|+||+||+|++..||+.||||.|+....  .......|||.+|+.++|||||.|.++|-+.+.+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            578899999999999999999999999999999975432  334456799999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         261 LAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ||+. +|...+.... .++..+++.|+.|+++||+|||++.|+||||||.|+|++++|  .+||+||||||.+.+.... 
T Consensus        82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g--~lKiADFGLAr~f~~p~~~-  157 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG--QLKIADFGLARFFGSPNRI-  157 (318)
T ss_pred             eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC--cEEeecccchhccCCCCcc-
Confidence            9985 7888887654 499999999999999999999999999999999999998876  8999999999998765433 


Q ss_pred             CcccchHHHhhhcCCCccccCCCCC---------------------CCCCCCcchhhhhhhcccc-----hhhchhhhhh
Q psy5279         340 PLEYDVRYVRQALRHPWLNFADRKP---------------------TEDTPKLNTDALRNYYNLY-----KDWYGNAAVR  393 (1310)
Q Consensus       340 ~~~~t~~yv~~~~r~P~l~~~~~~~---------------------~~~~p~~~~~~~~~~~~~~-----~D~~~~~~l~  393 (1310)
                         .|...+|.|||+|+++|+.+..                     .++ +.++.||+..+|..+     .+|+....++
T Consensus       158 ---~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp-G~sDidQL~~If~~LGTP~~~~WP~~~~lp  233 (318)
T KOG0659|consen  158 ---QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP-GDSDIDQLSKIFRALGTPTPDQWPEMTSLP  233 (318)
T ss_pred             ---cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC-CCchHHHHHHHHHHcCCCCcccCccccccc
Confidence               2344799999999999996543                     333 678899999888655     3354443222


Q ss_pred             ----------------------------------hcccCCCCCCccCCCcceecC
Q psy5279         394 ----------------------------------RYYRRRPLNSCYTHPSRMIYP  414 (1310)
Q Consensus       394 ----------------------------------~~~~r~~~~~cl~hpw~~~~~  414 (1310)
                                                        ...+|.++.|+|.|+|.+..|
T Consensus       234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P  288 (318)
T KOG0659|consen  234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP  288 (318)
T ss_pred             cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence                                              246889999999999976555


No 14 
>KOG0604|consensus
Probab=100.00  E-value=1.7e-36  Score=332.51  Aligned_cols=273  Identities=26%  Similarity=0.482  Sum_probs=216.2

Q ss_pred             ccCCCccccCCCCCcchhhhhh-ccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHh
Q psy5279         583 EDSPIEWSTEPPTDKYQFISEI-HRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEA  661 (1310)
Q Consensus       583 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  661 (1310)
                      +++-+....-+-|+.|+.-.++ --|--|-|++|-.|. |+.-+|-|++-=++.....|.--   .+.--|++|.++++-
T Consensus        48 ~~~~m~~k~~~itedY~is~qvLG~GinGkV~~C~~k~-T~ekfALKvL~Ds~KARrEVeLH---w~~s~h~~iV~IidV  123 (400)
T KOG0604|consen   48 EESDMDFKEYSITEDYSISWQVLGAGINGKVVQCVHKR-TQEKFALKVLLDSPKARREVELH---WMASGHPHIVSIIDV  123 (400)
T ss_pred             hhhhcchhcccchhhheehhhhhccccCCceEEEEecc-chhhhHHHHHhcCHHHHhHhhhh---hhhcCCCceEEeehh
Confidence            3455566666678888766553 568888899999888 89999999988776655554321   233469999999999


Q ss_pred             cCCCCcccchhhHHHHhhcCchhhhhhhcccc--chhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhc
Q psy5279         662 YKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--YTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSA  739 (1310)
Q Consensus       662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (1310)
                      |.-+-..-.-+.+|||++.|.|+++-+.+|..  |||.+++.|                                     
T Consensus       124 yeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI-------------------------------------  166 (400)
T KOG0604|consen  124 YENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEI-------------------------------------  166 (400)
T ss_pred             hhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHH-------------------------------------
Confidence            99988877888899999999999999999866  888776665                                     


Q ss_pred             ccccccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCC
Q psy5279         740 NTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTS  819 (1310)
Q Consensus       740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  819 (1310)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (400)
T KOG0604|consen  167 --------------------------------------------------------------------------------  166 (400)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeec
Q psy5279         820 ENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREK  899 (1310)
Q Consensus       820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~  899 (1310)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (400)
T KOG0604|consen  167 --------------------------------------------------------------------------------  166 (400)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEE
Q psy5279         900 PITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVM  979 (1310)
Q Consensus       900 ~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl  979 (1310)
                                                                          ++||+.|+.|||+.+|.||||||||+|.
T Consensus       167 ----------------------------------------------------~~qI~~Av~~lH~~nIAHRDlKpENLLy  194 (400)
T KOG0604|consen  167 ----------------------------------------------------MKQIGLAVRYLHSMNIAHRDLKPENLLY  194 (400)
T ss_pred             ----------------------------------------------------HHHHHHHHHHHHhcchhhccCChhheee
Confidence                                                                3489999999999999999999999999


Q ss_pred             eecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279         980 ASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus       980 ~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      .+.. +..+||+|||+|+.-...+...++|.+  |+|.|||++....                                 
T Consensus       195 t~t~~na~lKLtDfGFAK~t~~~~~L~TPc~T--PyYvaPevlg~eK---------------------------------  239 (400)
T KOG0604|consen  195 TTTSPNAPLKLTDFGFAKETQEPGDLMTPCFT--PYYVAPEVLGPEK---------------------------------  239 (400)
T ss_pred             ecCCCCcceEecccccccccCCCccccCCccc--ccccCHHHhCchh---------------------------------
Confidence            7643 467999999999876655666666654  8888888764333                                 


Q ss_pred             hhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccc
Q psy5279        1059 QNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALF 1138 (1310)
Q Consensus      1059 ~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf 1138 (1310)
                                                                                                      
T Consensus       240 --------------------------------------------------------------------------------  239 (400)
T KOG0604|consen  240 --------------------------------------------------------------------------------  239 (400)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCCh----hhhhhcccccccccc-cchhccCHHHHHHHHHh
Q psy5279        1139 KTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE----PETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213 (1310)
Q Consensus      1139 ~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~----~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~l 1213 (1310)
                                    |+..||+||+|||+|+||||++||+...-    +....+|..+.|.|| +.|+.+|++|||+|++|
T Consensus       240 --------------ydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~L  305 (400)
T KOG0604|consen  240 --------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKL  305 (400)
T ss_pred             --------------cCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHH
Confidence                          55566666666666666666666654432    245577899999997 67999999999999999


Q ss_pred             hhcCCCCCCCHHHhhcCCccCCch
Q psy5279        1214 FKRAPGKRPTVEECHENRWLVPSE 1237 (1310)
Q Consensus      1214 L~~dP~kRpTa~e~L~HpWl~~~~ 1237 (1310)
                      |+.+|.+|+|++|+++|||+....
T Consensus       306 Lkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  306 LKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             hcCCchhheeHHHhhcCchhcccc
Confidence            999999999999999999996433


No 15 
>KOG0600|consensus
Probab=100.00  E-value=1.1e-35  Score=343.75  Aligned_cols=196  Identities=27%  Similarity=0.445  Sum_probs=166.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~ly  256 (1310)
                      ..+.|+.++.||+|+||.||+|++..||+.||+|.|....  ........|||.||++|+|||||+|.+.....  ..+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            4578999999999999999999999999999999997554  34455677999999999999999999998877  7999


Q ss_pred             EEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||+|||+. +|.-.+... -.|++.+++.||+||++||+|||++||+|||||.+||||+++|  .+||+|||||+.+...
T Consensus       195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G--~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG--VLKIADFGLARFYTPS  271 (560)
T ss_pred             EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC--CEEeccccceeeccCC
Confidence            99999986 677766653 3699999999999999999999999999999999999998776  8999999999988765


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccC
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRR  398 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r  398 (1310)
                      +..   .+|...||+|||+|+++++...                |..+.| | .||.+.+.|.+|
T Consensus       272 ~~~---~~T~rVvTLWYRpPELLLG~t~----------------Yg~aVDlWS~GCIl~El~~gk  317 (560)
T KOG0600|consen  272 GSA---PYTSRVVTLWYRPPELLLGATS----------------YGTAVDLWSVGCILAELFLGK  317 (560)
T ss_pred             CCc---ccccceEEeeccChHHhcCCcc----------------cccceeehhhhHHHHHHHcCC
Confidence            432   3788889999999999988654                444556 5 566666665555


No 16 
>KOG0616|consensus
Probab=100.00  E-value=4e-36  Score=329.83  Aligned_cols=238  Identities=23%  Similarity=0.367  Sum_probs=199.3

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      --++|++.+.||.|+||+|.+++++.+|.-||+|++++..-   +..+...+|..+|+.+.||++|+|++.|.+.+.+||
T Consensus        42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym  121 (355)
T KOG0616|consen   42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM  121 (355)
T ss_pred             chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence            34789999999999999999999999999999999986532   334557789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||++||+|+.++.+.+.|+|..+++|++||+.||+|||+++|++||||||||||+.+|  ++||+|||+||++...  
T Consensus       122 vmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G--~iKitDFGFAK~v~~r--  197 (355)
T KOG0616|consen  122 VMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG--HIKITDFGFAKRVSGR--  197 (355)
T ss_pred             EEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC--cEEEEeccceEEecCc--
Confidence            999999999999999999999999999999999999999999999999999999999876  9999999999998654  


Q ss_pred             CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCC
Q psy5279         338 LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGT  417 (1310)
Q Consensus       338 l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~  417 (1310)
                      .-++||||.|++     |++..                 .+-|+-+.|||+.             .+|...++.++||+.
T Consensus       198 T~TlCGTPeYLA-----PEii~-----------------sk~ynkavDWWal-------------GVLIYEMlaG~pPF~  242 (355)
T KOG0616|consen  198 TWTLCGTPEYLA-----PEIIQ-----------------SKGYNKAVDWWAL-------------GVLIYEMLAGYPPFY  242 (355)
T ss_pred             EEEecCCccccC-----hHHhh-----------------cCCCCcchhHHHH-------------HHHHHHHHcCCCCCc
Confidence            668999999986     44421                 1337888999988             777888889999999


Q ss_pred             CCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCC
Q psy5279         418 QFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRG  462 (1310)
Q Consensus       418 ~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~  462 (1310)
                      ...|-.+.++| ++...+    .+-.+...++++++.+ +++..++
T Consensus       243 ~~~~~~iY~KI-~~~~v~----fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  243 DDNPIQIYEKI-LEGKVK----FPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             CCChHHHHHHH-HhCccc----CCcccCHHHHHHHHHHHhhhhHhh
Confidence            99886667776 555444    3333333336666655 5544443


No 17 
>KOG0607|consensus
Probab=100.00  E-value=3.5e-36  Score=331.55  Aligned_cols=280  Identities=22%  Similarity=0.369  Sum_probs=199.8

Q ss_pred             HHHhhhhccccccchh-----hhhhhcc-cCCCchh----------hHh-HHHHHhhhcCCCC--CceeecceeeeeeeC
Q psy5279         848 ERRNRINKYGAADTYT-----LRRLRHE-IGTRPEA----------HVE-ADALIESRRDGHA--PFFREKPITIPVVIG  908 (1310)
Q Consensus       848 ~r~~~~~~~~~~~~~~-----~~~l~~e-~~~~~~~----------~~~-a~~~ie~~~~~~~--~ffrE~~~~~~l~~g  908 (1310)
                      -||+|.++.+++++..     ++.|..| +|.+|++          .+| |+++|+++ .+|.  ..|||+....     
T Consensus        57 ~rrk~rk~gr~~ss~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~-----  130 (463)
T KOG0607|consen   57 RRRKKRKRGRATSSLSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFY-----  130 (463)
T ss_pred             cccccccCCcccccccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHH-----
Confidence            3456666777777654     8999998 6999987          566 99999998 6777  8999998743     


Q ss_pred             CEEEEEEeccCCCcceeeecccCCcccccccc-------------cCCCchhHHHHHHHHHHHHHHHHHCCceecccCCC
Q psy5279         909 DKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPI-------------VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPD  975 (1310)
Q Consensus       909 ~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~-------------~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPe  975 (1310)
                           .|....+...+++||+.....+++++.             ....++.+..+++.|+.||+|||.+||.||||||+
T Consensus       131 -----~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPE  205 (463)
T KOG0607|consen  131 -----QCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPE  205 (463)
T ss_pred             -----HhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCcc
Confidence                 244444556678888877776666532             23467788899999999999999999999999999


Q ss_pred             cEEEeecC-CCcEEEEeeccceeeccCC------cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCC
Q psy5279         976 NVVMASVR-SVQVKLIDLGCTQRVTKLG------TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048 (1310)
Q Consensus       976 NILl~~~~-~~~VKL~DFGlAk~~~~~g------~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~P 1048 (1310)
                      |||....+ -..||||||-+...+...+      +..-...+|+..|||||+..-         |          .|.  
T Consensus       206 NiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~---------f----------v~q--  264 (463)
T KOG0607|consen  206 NILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDV---------F----------VDQ--  264 (463)
T ss_pred             ceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhh---------h----------ccc--
Confidence            99997643 3469999998765432111      111122345678999987520         0          000  


Q ss_pred             CCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCC
Q psy5279        1049 FRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGW 1128 (1310)
Q Consensus      1049 F~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~ 1128 (1310)
                                                                                                      
T Consensus       265 --------------------------------------------------------------------------------  264 (463)
T KOG0607|consen  265 --------------------------------------------------------------------------------  264 (463)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCC---------------hhhhhhccccccc
Q psy5279        1129 SEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS---------------EPETRQNVNFVRY 1193 (1310)
Q Consensus      1129 s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~---------------~~e~~~~I~~~~~ 1193 (1310)
                                           -.-|+..||.||+|||+|+||+|++||.|.-               .+..+..|..+.|
T Consensus       265 ---------------------A~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY  323 (463)
T KOG0607|consen  265 ---------------------ATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY  323 (463)
T ss_pred             ---------------------cccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC
Confidence                                 0015555666666666666666666664431               2346788999999


Q ss_pred             ccc-cchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC-------chhHHHHHHHHHHhhhhhhHhHHHHhhh
Q psy5279        1194 RFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP-------SEYMIKKRERAVFLGNRLKEFSDEYHDL 1263 (1310)
Q Consensus      1194 ~f~-~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~-------~~~~~~~~~~~~~~~~~lk~~~~~~~~~ 1263 (1310)
                      .|| ..|..||.+|||+|+.||++||.+|.+|.+.|+|||+..       ...++..|...++   -|..|+..+.++
T Consensus       324 eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ekalptp~v~~r~~s~~---~lslfa~~aia~  398 (463)
T KOG0607|consen  324 EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKALPTPQVLQRNSSTM---DLSLFAAEAIAL  398 (463)
T ss_pred             cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhccCCCCcccccCccch---hhHHHHHHHHHH
Confidence            997 579999999999999999999999999999999999943       2234555555554   466677666665


No 18 
>KOG0032|consensus
Probab=100.00  E-value=3.5e-35  Score=342.92  Aligned_cols=232  Identities=29%  Similarity=0.469  Sum_probs=198.5

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCe
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---YKSLFKNELDIMNQLC-HRNLVRLHDSYETKDS  254 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~  254 (1310)
                      ..+.+.|++.++||+|.||.||+|+++.||+.+|+|+|.++...   ....+.+|+.||++|. |||||+++++|++...
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~  110 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS  110 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence            36788999999999999999999999999999999999876543   3468999999999998 9999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC--CeEEEEeeccceee
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI  332 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~--~~VKLsDFGLAr~i  332 (1310)
                      +|+|||+|.||+|++++... .++|.++..+++|++.|+.|||++||+||||||||+|+.....  ..+|++|||||+..
T Consensus       111 ~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  111 VYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             EEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence            99999999999999999887 5999999999999999999999999999999999999986643  47999999999999


Q ss_pred             cCCCCCCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccc
Q psy5279         333 TSFGKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLY  383 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~  383 (1310)
                      .....+...|||+.|+++.                         +..||........    ....+.+..+.+.+++..+
T Consensus       190 ~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~a  269 (382)
T KOG0032|consen  190 KPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESA  269 (382)
T ss_pred             cCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHH
Confidence            8866788889998887742                         2235544331111    1112345666777778888


Q ss_pred             hhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         384 KDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       384 ~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +|++...+..+..+|+|+.+||.|||+.
T Consensus       270 kd~i~~ll~~dp~~R~ta~~~L~HpWi~  297 (382)
T KOG0032|consen  270 KDFIRKLLEFDPRKRLTAAQALQHPWIK  297 (382)
T ss_pred             HHHHHHhcccCcccCCCHHHHhcCcccc
Confidence            9999999999999999999999999964


No 19 
>KOG0593|consensus
Probab=100.00  E-value=1.3e-35  Score=326.12  Aligned_cols=174  Identities=23%  Similarity=0.377  Sum_probs=151.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      +.|+.+.++|+|+||+||+|+++.||+.||||++....  ...++...|||.+|++|+|||+|.|+++|.....++||+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            57889999999999999999999999999999886442  3456778899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP  340 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~  340 (1310)
                      ||...-|.+.-.....+++..++.|++|++.|+.|||+++|||||||||||||+.++  .+||||||+||.+..++.   
T Consensus        82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g--vvKLCDFGFAR~L~~pgd---  156 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG--VVKLCDFGFARTLSAPGD---  156 (396)
T ss_pred             ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC--cEEeccchhhHhhcCCcc---
Confidence            999765544444445699999999999999999999999999999999999999766  899999999999874432   


Q ss_pred             cccchHHHhhhcCCCccccCCC
Q psy5279         341 LEYDVRYVRQALRHPWLNFADR  362 (1310)
Q Consensus       341 ~~~t~~yv~~~~r~P~l~~~~~  362 (1310)
                       .||--.+|+|||+|+++.+|-
T Consensus       157 -~YTDYVATRWYRaPELLvGDt  177 (396)
T KOG0593|consen  157 -NYTDYVATRWYRAPELLVGDT  177 (396)
T ss_pred             -hhhhhhhhhhccChhhhcccC
Confidence             355555789999999988843


No 20 
>KOG0663|consensus
Probab=100.00  E-value=1.4e-34  Score=321.35  Aligned_cols=222  Identities=23%  Similarity=0.308  Sum_probs=180.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~lyL  257 (1310)
                      -+.|+.+..|++|+||.||+|+++.|++.||+|.++-..  ....-.-.|||.+|.+++|||||.+.++....  +.+||
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            356889999999999999999999999999999987443  23333457999999999999999999988654  57999


Q ss_pred             EEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |||||+. +|...+..- ..|+..+++.++.|++.||+|||.+.|+||||||+|+|+++.|  .+||+||||||.+.+.-
T Consensus       155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G--~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKG--ILKIADFGLAREYGSPL  231 (419)
T ss_pred             eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCC--cEEecccchhhhhcCCc
Confidence            9999997 444444332 4699999999999999999999999999999999999999876  79999999999987642


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCC---------------------CCCCCCCCcchhhhhhhcccc-----hhhchhh
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADR---------------------KPTEDTPKLNTDALRNYYNLY-----KDWYGNA  390 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~---------------------~~~~~~p~~~~~~~~~~~~~~-----~D~~~~~  390 (1310)
                          ..+|+-.||+|||+|+++++..                     +|+++ +.++.+|+..||..+     .+|+|..
T Consensus       232 ----k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~-G~sE~dQl~~If~llGtPte~iwpg~~  306 (419)
T KOG0663|consen  232 ----KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP-GKSEIDQLDKIFKLLGTPSEAIWPGYS  306 (419)
T ss_pred             ----ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC-CCchHHHHHHHHHHhCCCccccCCCcc
Confidence                2356677999999999999843                     44554 778999999888655     4455543


Q ss_pred             hhh--------------------------------------hcccCCCCCCccCCCcce
Q psy5279         391 AVR--------------------------------------RYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       391 ~l~--------------------------------------~~~~r~~~~~cl~hpw~~  411 (1310)
                      .++                                      +..+|.|+++||.|+|..
T Consensus       307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~  365 (419)
T KOG0663|consen  307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFR  365 (419)
T ss_pred             ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccc
Confidence            211                                      246789999999999964


No 21 
>KOG0595|consensus
Probab=100.00  E-value=2.8e-35  Score=334.35  Aligned_cols=261  Identities=24%  Similarity=0.400  Sum_probs=219.6

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC---cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCccc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTAS  669 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  669 (1310)
                      +.-+.|.+.++|-+|-||||.||.-+- +++.||.|-+.-.   ......+..|+..||+|+||||..|++.-..+    
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~-~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~----   81 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKK-SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD----   81 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEecc-CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC----
Confidence            445789999999999999999999998 5599999988765   34455568999999999999999999998888    


Q ss_pred             chhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccc
Q psy5279         670 NIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKT  749 (1310)
Q Consensus       670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  749 (1310)
                      +...||||||.|.|+-.|+..|..-.|.                                                    
T Consensus        82 ~~i~lVMEyC~gGDLs~yi~~~~~l~e~----------------------------------------------------  109 (429)
T KOG0595|consen   82 DFIYLVMEYCNGGDLSDYIRRRGRLPEA----------------------------------------------------  109 (429)
T ss_pred             CeEEEEEEeCCCCCHHHHHHHcCCCCHH----------------------------------------------------
Confidence            6889999999999998888665422221                                                    


Q ss_pred             ccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcc
Q psy5279         750 WEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAP  829 (1310)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  829 (1310)
                                                                                                      
T Consensus       110 --------------------------------------------------------------------------------  109 (429)
T KOG0595|consen  110 --------------------------------------------------------------------------------  109 (429)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCC
Q psy5279         830 VIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGD  909 (1310)
Q Consensus       830 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~  909 (1310)
                                                                                                      
T Consensus       110 --------------------------------------------------------------------------------  109 (429)
T KOG0595|consen  110 --------------------------------------------------------------------------------  109 (429)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-CC---C
Q psy5279         910 KLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RS---V  985 (1310)
Q Consensus       910 ~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-~~---~  985 (1310)
                                                           .++.+++||+.||++||+++||||||||+||||+.. +.   .
T Consensus       110 -------------------------------------t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~  152 (429)
T KOG0595|consen  110 -------------------------------------TARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSP  152 (429)
T ss_pred             -------------------------------------HHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCc
Confidence                                                 134557899999999999999999999999999874 33   5


Q ss_pred             cEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc
Q psy5279         986 QVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065 (1310)
Q Consensus       986 ~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~ 1065 (1310)
                      .+||+|||+|+.+.......+  .+|+|.|||||++..+.|+.|+|+||+|+|+|+|++|++||...+..++...++...
T Consensus       153 ~LKIADFGfAR~L~~~~~a~t--lcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~  230 (429)
T KOG0595|consen  153 VLKIADFGFARFLQPGSMAET--LCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGN  230 (429)
T ss_pred             eEEecccchhhhCCchhHHHH--hhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccc
Confidence            799999999998875444333  457899999999999999999999999999999999999999999999998888777


Q ss_pred             ccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccccc
Q psy5279        1066 YRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1066 ~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~~~ 1109 (1310)
                      .-.+.....+++...+++..++. .+.+|+...+...|++.....
T Consensus       231 ~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  231 EIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             cccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            76677777888888888876665 667899999989888765443


No 22 
>KOG0593|consensus
Probab=100.00  E-value=2.5e-34  Score=315.99  Aligned_cols=111  Identities=22%  Similarity=0.382  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      ..-++.|++.|+.|||+++|||||||||||||+.  ++.+||||||+|+.+...+...+.. ..|.+|+|||.+.+ ..|
T Consensus       103 vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~--~gvvKLCDFGFAR~L~~pgd~YTDY-VATRWYRaPELLvGDtqY  179 (396)
T KOG0593|consen  103 VKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ--NGVVKLCDFGFARTLSAPGDNYTDY-VATRWYRAPELLVGDTQY  179 (396)
T ss_pred             HHHHHHHHHHHhhhhhhcCeecccCChhheEEec--CCcEEeccchhhHhhcCCcchhhhh-hhhhhccChhhhcccCcC
Confidence            4456789999999999999999999999999986  5679999999999887545443322 34689999999998 589


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      +.++||||+||++.||++|.+-|.|.++-+....|
T Consensus       180 G~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I  214 (396)
T KOG0593|consen  180 GKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLI  214 (396)
T ss_pred             CCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHH
Confidence            99999999999999999999999999876655444


No 23 
>KOG0588|consensus
Probab=100.00  E-value=1.2e-34  Score=342.43  Aligned_cols=153  Identities=27%  Similarity=0.472  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ++.++.||++|+.|||..+|+||||||||+|++..+  .+||+|||+|....+.....+.|  |+|.|.|||++.+.+|+
T Consensus       114 aa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--nIKIADFGMAsLe~~gklLeTSC--GSPHYA~PEIV~G~pYd  189 (786)
T KOG0588|consen  114 AAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--NIKIADFGMASLEVPGKLLETSC--GSPHYAAPEIVSGRPYD  189 (786)
T ss_pred             HHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--CEeeeccceeecccCCccccccC--CCcccCCchhhcCCCCC
Confidence            344567999999999999999999999999998744  39999999997655544444444  67999999998877664


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                                                                                                      
T Consensus       190 --------------------------------------------------------------------------------  189 (786)
T KOG0588|consen  190 --------------------------------------------------------------------------------  189 (786)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhc
Q psy5279        1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1187 (1310)
Q Consensus      1108 ~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~ 1187 (1310)
                                                                    +.++||||||||+|.||+|..||.++|-...+..
T Consensus       190 ----------------------------------------------G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlK  223 (786)
T KOG0588|consen  190 ----------------------------------------------GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLK  223 (786)
T ss_pred             ----------------------------------------------CCccccchhHHHHHHHHhCCCCCCCccHHHHHHH
Confidence                                                          2234555555555555555555555555556666


Q ss_pred             ccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCcc
Q psy5279        1188 VNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233 (1310)
Q Consensus      1188 I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl 1233 (1310)
                      |.++.|..|   ..||.+|+|||++||.+||++|+|.+|+++|||+
T Consensus       224 V~~G~f~MP---s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l  266 (786)
T KOG0588|consen  224 VQRGVFEMP---SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFL  266 (786)
T ss_pred             HHcCcccCC---CcCCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence            777777777   6899999999999999999999999999999999


No 24 
>KOG0661|consensus
Probab=100.00  E-value=1.1e-34  Score=333.64  Aligned_cols=193  Identities=23%  Similarity=0.365  Sum_probs=162.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHH-HHHHHHHHHHhcC-CCCcceEEEEEEeCC-eEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS-LFKNELDIMNQLC-HRNLVRLHDSYETKD-SFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~-~~~rEI~IL~~L~-HPNIVkL~d~f~~~~-~ly  256 (1310)
                      .+.++|.+.++||.|+||.||+|+.+.+|..||||.++++-....+ .-.||+..|++|+ |||||+|++++.+.+ .+|
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            4678999999999999999999999999999999999766433333 2358999999999 999999999999988 999


Q ss_pred             EEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +|||||.. +|++.+..+. .|+|.+++.||+||++||+|+|.+|+.|||||||||||..  ...|||+||||||.+.+.
T Consensus        87 fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDFGLARev~Sk  163 (538)
T KOG0661|consen   87 FVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG--NDVIKIADFGLAREVRSK  163 (538)
T ss_pred             eeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--cceeEecccccccccccC
Confidence            99999985 6888887654 4999999999999999999999999999999999999974  347999999999998664


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCC---------------------CCCCCCCcchhhhhhhcc
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRK---------------------PTEDTPKLNTDALRNYYN  381 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~---------------------~~~~~p~~~~~~~~~~~~  381 (1310)
                      ..     ||--.-|+|||+|++++.+..                     |+|+ +..+.||+.+|-+
T Consensus       164 pP-----YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFP-G~sE~Dqi~KIc~  224 (538)
T KOG0661|consen  164 PP-----YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFP-GASEIDQIYKICE  224 (538)
T ss_pred             CC-----cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCC-CCcHHHHHHHHHH
Confidence            33     444446799999999888544                     4444 5667788765543


No 25 
>KOG0583|consensus
Probab=100.00  E-value=1.5e-33  Score=328.32  Aligned_cols=170  Identities=30%  Similarity=0.483  Sum_probs=155.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC----Cc-chHHHHHHHHHHHHhcC-CCCcceEEEEEEeCC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK----GN-QYKSLFKNELDIMNQLC-HRNLVRLHDSYETKD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~----~~-~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~  253 (1310)
                      .....|.+.+.||+|+||+|+.|.+..+|+.||+|++.++    .. ...+.+.+|+.+|+.+. ||||+++++++.++.
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4567899999999999999999999999999999987654    12 23456779999999998 999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee-
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI-  332 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i-  332 (1310)
                      .+|+|||||.||+|++.+...+.+.|.+++.+++||+.||+|||++||+||||||||||++.+. ..+||+|||+|... 
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~  172 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISP  172 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccC
Confidence            9999999999999999999988999999999999999999999999999999999999998763 48999999999988 


Q ss_pred             cCCCCCCCcccchHHHhh
Q psy5279         333 TSFGKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~  350 (1310)
                      ...+.+++.|||+.|+++
T Consensus       173 ~~~~~l~t~cGsp~Y~aP  190 (370)
T KOG0583|consen  173 GEDGLLKTFCGSPAYAAP  190 (370)
T ss_pred             CCCCcccCCCCCcccCCH
Confidence            577889999999999885


No 26 
>KOG0605|consensus
Probab=100.00  E-value=1.7e-33  Score=328.05  Aligned_cols=279  Identities=21%  Similarity=0.340  Sum_probs=184.2

Q ss_pred             cccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEE-eccCCC-cceeeecccCCc
Q psy5279         858 AADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKC-LAVGEP-KPVIQWFKLGTS  933 (1310)
Q Consensus       858 ~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~-l~~G~p-~~vi~~f~~g~~  933 (1310)
                      --++||||+||+.  +...+++|+.||+-|....+  .++.              |.+.| .+..+- ..+|+|+.+|+.
T Consensus       165 Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d--s~~v--------------VKLyYsFQD~~~LYLiMEylPGGD~  228 (550)
T KOG0605|consen  165 TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD--SPWV--------------VKLYYSFQDKEYLYLIMEYLPGGDM  228 (550)
T ss_pred             CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC--CCcE--------------EEEEEEecCCCeeEEEEEecCCccH
Confidence            4589999999944  69999999999998876533  3333              33333 233333 334565655555


Q ss_pred             ccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         934 TLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       934 l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                      ..+++......++.+++++.+.+.||+-+|+.|+|||||||+|+||+.  .+++||+|||+|..+......        -
T Consensus       229 mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~--~GHiKLSDFGLs~gl~~~~~~--------~  298 (550)
T KOG0605|consen  229 MTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDA--KGHIKLSDFGLSTGLDKKHRI--------E  298 (550)
T ss_pred             HHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecC--CCCEeeccccccchhhhhhhh--------h
Confidence            555555556677778999999999999999999999999999999986  678999999998533221110        0


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcch
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDW 1093 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~r 1093 (1310)
                      .|.--+.         .+.         -+....|                 ..++..                ..+..+
T Consensus       299 ~~~~~~~---------~~~---------~~~~~~~-----------------~~~~~~----------------~~~~~~  327 (550)
T KOG0605|consen  299 SYRLDEQ---------MQI---------NLSEAKP-----------------SDFPKF----------------NTPRST  327 (550)
T ss_pred             hhcchhh---------hhh---------hhccCCC-----------------cccccc----------------ccccch
Confidence            0000000         000         0000000                 000000                000000


Q ss_pred             hcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCC
Q psy5279        1094 ITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA 1173 (1310)
Q Consensus      1094 it~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~ 1173 (1310)
                      +.-.+.+++  |..         +-+.-|.     |.-|.      +..-||||+.+.+|+..||+||+|||+||||+|.
T Consensus       328 ~~~~~~~~~--w~~---------nrr~~a~-----StVGT------PDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGy  385 (550)
T KOG0605|consen  328 MSRREQLQT--WKR---------NRRQLAY-----STVGT------PDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGY  385 (550)
T ss_pred             hhHHHHHHH--HHh---------hhhhhhh-----cccCC------ccccchHHHhcCCCCccccHHHHHHHHHHHHhCC
Confidence            000000000  000         0011111     11222      3667999999999999999999999999999999


Q ss_pred             CCCCCCChhhhhhcccccc--cccccchhccCHHHHHHHHHhhhcCCCCCCC---HHHhhcCCccCCch
Q psy5279        1174 SPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKRAPGKRPT---VEECHENRWLVPSE 1237 (1310)
Q Consensus      1174 ~PF~g~~~~e~~~~I~~~~--~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpT---a~e~L~HpWl~~~~ 1237 (1310)
                      |||.+++.++|+.+|..-+  +.||. -..+|.+|+|||.|||. ||.+|+.   ++|+.+||||...+
T Consensus       386 PPF~s~tp~~T~rkI~nwr~~l~fP~-~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~  452 (550)
T KOG0605|consen  386 PPFCSETPQETYRKIVNWRETLKFPE-EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD  452 (550)
T ss_pred             CCCCCCCHHHHHHHHHHHhhhccCCC-cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence            9999999999999999777  56653 24689999999999999 9999995   99999999996544


No 27 
>KOG0592|consensus
Probab=100.00  E-value=5.1e-34  Score=331.98  Aligned_cols=227  Identities=23%  Similarity=0.376  Sum_probs=181.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -..+|.+++.||+|+|++|++|+++.|+++||||++.++-   .+..+-+.+|-.+|.+| .||.||+|+..|+++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            3467899999999999999999999999999999997642   22234577899999999 8999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +|+||+++|+|++.+.+.+.|+|..+++|+.||+.||+|||++||||||||||||||+.++  ++||+|||-|+.+.+..
T Consensus       151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm--hikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG--HIKITDFGSAKILSPSQ  228 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC--cEEEeeccccccCChhh
Confidence            9999999999999999999999999999999999999999999999999999999998655  99999999999886422


Q ss_pred             C--------------CCCcccchHHHhhhcCC--------CccccC-------CCCCCCCCCCcchhhhh----------
Q psy5279         337 K--------------LNPLEYDVRYVRQALRH--------PWLNFA-------DRKPTEDTPKLNTDALR----------  377 (1310)
Q Consensus       337 ~--------------l~~~~~t~~yv~~~~r~--------P~l~~~-------~~~~~~~~p~~~~~~~~----------  377 (1310)
                      .              ..+++||..||.+.+..        -.+.|+       ...|.|.. ..+--.++          
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra-~NeyliFqkI~~l~y~fp  307 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA-ANEYLIFQKIQALDYEFP  307 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc-ccHHHHHHHHHHhcccCC
Confidence            1              14588999998753221        001111       12222210 00111111          


Q ss_pred             -hhcccchhhchhhhhhhcccCCCCCCccCCCcc
Q psy5279         378 -NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       378 -~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~  410 (1310)
                       ++...+.|.+...++.+...|.++.++-+||+.
T Consensus       308 ~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF  341 (604)
T KOG0592|consen  308 EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFF  341 (604)
T ss_pred             CCCCHHHHHHHHHHHccCccccccHHHHhhCccc
Confidence             223455788888999999999999999999995


No 28 
>KOG0694|consensus
Probab=100.00  E-value=3.2e-33  Score=332.83  Aligned_cols=234  Identities=23%  Similarity=0.384  Sum_probs=190.8

Q ss_pred             ccccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcc
Q psy5279         857 GAADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTST  934 (1310)
Q Consensus       857 ~~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l  934 (1310)
                      .-.+.||||.||++  +....+..++.|+.|..... .+||+.....+++-.....++|+++.+|+   ++.        
T Consensus       391 ~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-~HPFL~~L~~~fQT~~~l~fvmey~~Ggd---m~~--------  458 (694)
T KOG0694|consen  391 GTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-RHPFLVNLFSCFQTKEHLFFVMEYVAGGD---LMH--------  458 (694)
T ss_pred             CCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-cCCeEeecccccccCCeEEEEEEecCCCc---EEE--------
Confidence            34568999999976  58899999999999988877 68899999888886666667888877776   222        


Q ss_pred             cccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCc
Q psy5279         935 LCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014 (1310)
Q Consensus       935 ~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~ 1014 (1310)
                        +.......+..+++++..|+.||+|||++||||||||.+|||++.  .+++||+|||+++..-..+. .+.+.+|||.
T Consensus       459 --~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~--eGh~kiADFGlcKe~m~~g~-~TsTfCGTpe  533 (694)
T KOG0694|consen  459 --HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDT--EGHVKIADFGLCKEGMGQGD-RTSTFCGTPE  533 (694)
T ss_pred             --EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcc--cCcEEecccccccccCCCCC-ccccccCChh
Confidence              222234566678999999999999999999999999999999986  67899999999986543333 4556778899


Q ss_pred             ccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchh
Q psy5279        1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWI 1094 (1310)
Q Consensus      1015 Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~ri 1094 (1310)
                      |||||++.+.                                                                      
T Consensus       534 y~aPEil~e~----------------------------------------------------------------------  543 (694)
T KOG0694|consen  534 FLAPEVLTEQ----------------------------------------------------------------------  543 (694)
T ss_pred             hcChhhhccC----------------------------------------------------------------------
Confidence            9999886543                                                                      


Q ss_pred             cHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCC
Q psy5279        1095 TLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1174 (1310)
Q Consensus      1095 t~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~ 1174 (1310)
                                                                               .|+.+|||||+||++|+||+|.+
T Consensus       544 ---------------------------------------------------------~Yt~aVDWW~lGVLlyeML~Gq~  566 (694)
T KOG0694|consen  544 ---------------------------------------------------------SYTRAVDWWGLGVLLYEMLVGES  566 (694)
T ss_pred             ---------------------------------------------------------cccchhhHHHHHHHHHHHHcCCC
Confidence                                                                     36677788888888888888888


Q ss_pred             CCCCCChhhhhhcccccccccccchhccCHHHHHHHHHhhhcCCCCCCC-----HHHhhcCCccCCch
Q psy5279        1175 PFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPT-----VEECHENRWLVPSE 1237 (1310)
Q Consensus      1175 PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpT-----a~e~L~HpWl~~~~ 1237 (1310)
                      ||.|++++|.+.+|..-++.+|   .++|.||.+++++||.+||.+|+.     ++++..||+|-..+
T Consensus       567 PF~gddEee~FdsI~~d~~~yP---~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  567 PFPGDDEEEVFDSIVNDEVRYP---RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             CCCCCCHHHHHHHHhcCCCCCC---CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence            8888888888888888777776   689999999999999999999996     58999999996655


No 29 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00  E-value=1.4e-33  Score=314.09  Aligned_cols=98  Identities=26%  Similarity=0.519  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++......    ....|++.|+|||++.+..++.++
T Consensus       106 ~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~--~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~  179 (291)
T cd05612         106 YASEIVCALEYLHSKEIVYRDLKPENILLDK--EGHIKLTDFGFAKKLRDRT----WTLCGTPEYLAPEVIQSKGHNKAV  179 (291)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEEecCcchhccCCc----ccccCChhhcCHHHHcCCCCCchh
Confidence            4569999999999999999999999999975  4579999999987553211    123577999999999999999999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |||||||++|+|++|..||.+.+.
T Consensus       180 DiwSlG~il~~l~~g~~pf~~~~~  203 (291)
T cd05612         180 DWWALGILIYEMLVGYPPFFDDNP  203 (291)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999976543


No 30 
>KOG0597|consensus
Probab=100.00  E-value=1.3e-33  Score=327.65  Aligned_cols=253  Identities=26%  Similarity=0.419  Sum_probs=216.1

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccCc---chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchh
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH---DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA  672 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  672 (1310)
                      ..|..+++|-+|.||+|.|++.|- |.+.||.|.+.-+-   ..++.+.+|.+.+|+|+|+||...+|-|..+    ++.
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~-t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~----~~~   76 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKY-TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS----AHL   76 (808)
T ss_pred             cchhHHHHhcCCccceeeeccccc-ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc----ceE
Confidence            368889999999999999999998 99999999998654   4568899999999999999999999999988    899


Q ss_pred             hHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccccC
Q psy5279         673 VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWED  752 (1310)
Q Consensus       673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  752 (1310)
                      ++|.|||+| |+-.+|+.-....|+                                                       
T Consensus        77 ~vVte~a~g-~L~~il~~d~~lpEe-------------------------------------------------------  100 (808)
T KOG0597|consen   77 WVVTEYAVG-DLFTILEQDGKLPEE-------------------------------------------------------  100 (808)
T ss_pred             EEEehhhhh-hHHHHHHhccCCCHH-------------------------------------------------------
Confidence            999999999 876555432222221                                                       


Q ss_pred             CCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchhh
Q psy5279         753 NVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIR  832 (1310)
Q Consensus       753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  832 (1310)
                                                                                                      
T Consensus       101 --------------------------------------------------------------------------------  100 (808)
T KOG0597|consen  101 --------------------------------------------------------------------------------  100 (808)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEE
Q psy5279         833 ERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLE  912 (1310)
Q Consensus       833 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~  912 (1310)
                                                                                                      
T Consensus       101 --------------------------------------------------------------------------------  100 (808)
T KOG0597|consen  101 --------------------------------------------------------------------------------  100 (808)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEee
Q psy5279         913 MKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDL  992 (1310)
Q Consensus       913 ~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DF  992 (1310)
                                                        .++-+..|++.||.|||+.+|+|||+||.|||++.  .+.+|+|||
T Consensus       101 ----------------------------------~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~--~~~~KlcdF  144 (808)
T KOG0597|consen  101 ----------------------------------QVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEK--GGTLKLCDF  144 (808)
T ss_pred             ----------------------------------HHHHHHHHHHHHHHHHHhcCcccccCCcceeeecC--CCceeechh
Confidence                                              23445679999999999999999999999999985  567999999


Q ss_pred             ccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccc
Q psy5279         993 GCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF 1072 (1310)
Q Consensus       993 GlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~ 1072 (1310)
                      |+|+.++. ++.......|||.|||||++.+++|+..+|.||+|||+|||.+|++||...+..++.+.|.....+.|   
T Consensus       145 g~Ar~m~~-~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p---  220 (808)
T KOG0597|consen  145 GLARAMST-NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP---  220 (808)
T ss_pred             hhhhhccc-CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc---
Confidence            99988765 33334445789999999999999999999999999999999999999999888888888877666655   


Q ss_pred             hhccHHHHHHHHHhc-cCCcchhcHHhhhCCCcccccc
Q psy5279        1073 KELTQEATRFLMLIF-KHEVDWITLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1073 ~~lS~eakdLL~~il-~~~~~rit~~e~L~H~f~~~~~ 1109 (1310)
                      ..+|...+.||..+| ++|..|++-.+.+.|+||..+.
T Consensus       221 ~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  221 STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence            488999999999877 5777899999999999997654


No 31 
>KOG0598|consensus
Probab=100.00  E-value=3.5e-33  Score=315.05  Aligned_cols=234  Identities=20%  Similarity=0.329  Sum_probs=181.9

Q ss_pred             ccccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcc
Q psy5279         857 GAADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTST  934 (1310)
Q Consensus       857 ~~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l  934 (1310)
                      .-..+||||.|++.  +..+-.+|+.+|..|.+.  -++||+....-.++             .++...++-.|..||.|
T Consensus        48 dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~--v~hPFiv~l~ysFQ-------------t~~kLylVld~~~GGeL  112 (357)
T KOG0598|consen   48 DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSK--IKHPFIVKLIYSFQ-------------TEEKLYLVLDYLNGGEL  112 (357)
T ss_pred             ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHh--CCCCcEeeeEEecc-------------cCCeEEEEEeccCCccH
Confidence            45678999988855  466778899999988877  45677766555443             22233333334445555


Q ss_pred             ccccc-ccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         935 LCYLP-IVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       935 ~~~L~-~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                      ..-|+ .....+..+++++..|+.||.|||++|||||||||||||++.  .++|+|+|||+++.....+.. +...+||+
T Consensus       113 f~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~--~GHi~LtDFgL~k~~~~~~~~-t~tfcGT~  189 (357)
T KOG0598|consen  113 FYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDE--QGHIKLTDFGLCKEDLKDGDA-TRTFCGTP  189 (357)
T ss_pred             HHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecC--CCcEEEeccccchhcccCCCc-cccccCCc
Confidence            54453 455667779999999999999999999999999999999986  567999999999865444333 33467889


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCc-c
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEV-D 1092 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~-~ 1092 (1310)
                      .|||||++.+.+|+..+|||||||++|+||+|.+||.+.+..+++++|......++  ...+|.+++++++++++.++ +
T Consensus       190 eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~--p~~ls~~ardll~~LL~rdp~~  267 (357)
T KOG0598|consen  190 EYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLP--PGYLSEEARDLLKKLLKRDPRQ  267 (357)
T ss_pred             cccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCC--CccCCHHHHHHHHHHhccCHHH
Confidence            99999999999999999999999999999999999999999999999987763332  24589999999999987554 5


Q ss_pred             hh----cHHhhhCCCccccccc
Q psy5279        1093 WI----TLANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1093 ri----t~~e~L~H~f~~~~~l 1110 (1310)
                      |.    .+.++-.|+||...+.
T Consensus       268 RLg~~~d~~~ik~HpfF~~inW  289 (357)
T KOG0598|consen  268 RLGGPGDAEEIKRHPFFKGINW  289 (357)
T ss_pred             hcCCCCChHHhhcCcccccCCH
Confidence            53    5677778988876554


No 32 
>KOG0599|consensus
Probab=100.00  E-value=1.5e-34  Score=313.56  Aligned_cols=229  Identities=23%  Similarity=0.390  Sum_probs=191.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC-----Cc---chHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-----GN---QYKSLFKNELDIMNQL-CHRNLVRLHDSYE  250 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~-----~~---~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~  250 (1310)
                      .|...|+-.+.||+|..++|.+|.++.||+++|+|+|...     +.   ..++...+|+.||+++ .||+|++|.++|+
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            5667788889999999999999999999999999999632     11   1244567899999998 6999999999999


Q ss_pred             eCCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         251 TKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       251 ~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ++..+++|+|+|+.|+||+++...-.++|.+++.+|+|+++|+.|||.++||||||||||||++++  .+|||+|||+|.
T Consensus        94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn--~~i~isDFGFa~  171 (411)
T KOG0599|consen   94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDN--MNIKISDFGFAC  171 (411)
T ss_pred             CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccc--cceEEeccceee
Confidence            999999999999999999999988889999999999999999999999999999999999999764  589999999999


Q ss_pred             eecCCCCCCCcccchHHHhhh-------------------------------cCCCccccCC----CCCCCCCCCcchhh
Q psy5279         331 RITSFGKLNPLEYDVRYVRQA-------------------------------LRHPWLNFAD----RKPTEDTPKLNTDA  375 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~-------------------------------~r~P~l~~~~----~~~~~~~p~~~~~~  375 (1310)
                      .+.++..+..+||||.|+++.                               +++||+.--.    +.-.+..-.+...+
T Consensus       172 ~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~spe  251 (411)
T KOG0599|consen  172 QLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPE  251 (411)
T ss_pred             ccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcc
Confidence            999999999999999987742                               2233321000    00001112334456


Q ss_pred             hhhhcccchhhchhhhhhhcccCCCCCCccCCCcc
Q psy5279         376 LRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       376 ~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~  410 (1310)
                      +.++.+..+|.++..++-+.++|.|+.+||+|||.
T Consensus       252 Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff  286 (411)
T KOG0599|consen  252 WADISATVKDLISRLLQVDPTKRITAKEALAHPFF  286 (411)
T ss_pred             hhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence            66777788999999999999999999999999996


No 33 
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00  E-value=2.9e-31  Score=330.31  Aligned_cols=166  Identities=25%  Similarity=0.392  Sum_probs=143.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.|.+.+.||+|+||.||+|.+..+++.||||++.....   .....+.+|+.+++.++||||+++++++...+.+|||
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            3679999999999999999999999999999999975432   2345678899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-C
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-K  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~  337 (1310)
                      |||+.||+|...+...+.+++..++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+++...... .
T Consensus        83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g--~vkL~DFGls~~~~~~~~~  160 (669)
T cd05610          83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG--HIKLTDFGLSKVTLNRELN  160 (669)
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC--CEEEEeCCCCccccCCccc
Confidence            99999999999998777899999999999999999999999999999999999998654  79999999999764332 2


Q ss_pred             CCCcccchHHHh
Q psy5279         338 LNPLEYDVRYVR  349 (1310)
Q Consensus       338 l~~~~~t~~yv~  349 (1310)
                      .....+|+.|++
T Consensus       161 ~~~~~~t~~~~~  172 (669)
T cd05610         161 MMDILTTPSMAK  172 (669)
T ss_pred             ccccccCccccC
Confidence            334455655554


No 34 
>KOG0581|consensus
Probab=99.98  E-value=1e-32  Score=311.48  Aligned_cols=228  Identities=21%  Similarity=0.319  Sum_probs=184.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC-CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-eEEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-SFTIIS  259 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~-~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-~lyLVm  259 (1310)
                      .+..+..++||+|..|+||+|+|+.|++.+|+|+|... ....++.+.+|++|++..+||+||++|++|..++ .++|+|
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m  157 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM  157 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence            34567788999999999999999999999999999543 3345677899999999999999999999999999 499999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||.||+|...+...+.++|.....++.||++||.|||+ ++||||||||+|||+++.|  .|||||||.++.+.+. ..
T Consensus       158 EYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG--eVKicDFGVS~~lvnS-~a  234 (364)
T KOG0581|consen  158 EYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG--EVKICDFGVSGILVNS-IA  234 (364)
T ss_pred             hhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC--CEEeccccccHHhhhh-hc
Confidence            999999999999888889999999999999999999995 9999999999999999876  8999999999988765 66


Q ss_pred             CCcccchHHHhhh-------------------------cCCCccccCCCCC---------CCCCCCcchhhhhhhcccch
Q psy5279         339 NPLEYDVRYVRQA-------------------------LRHPWLNFADRKP---------TEDTPKLNTDALRNYYNLYK  384 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~---------~~~~p~~~~~~~~~~~~~~~  384 (1310)
                      +++.||..|+++.                         ++-|+..-.....         ....|+.-++.  .+...+.
T Consensus       235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~--~fS~ef~  312 (364)
T KOG0581|consen  235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG--EFSPEFR  312 (364)
T ss_pred             ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc--cCCHHHH
Confidence            8899999888753                         1123322100000         00001111111  1234457


Q ss_pred             hhchhhhhhhcccCCCCCCccCCCcceecC
Q psy5279         385 DWYGNAAVRRYYRRRPLNSCYTHPSRMIYP  414 (1310)
Q Consensus       385 D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~  414 (1310)
                      +|+++++.++...|.+++|.+.|||+..+.
T Consensus       313 ~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  313 SFVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             HHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence            899999999999999999999999985443


No 35 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.98  E-value=2.1e-33  Score=311.86  Aligned_cols=106  Identities=23%  Similarity=0.409  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++...... .......+++.|+|||++.+ ..++
T Consensus       106 ~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~DfG~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~  182 (288)
T cd07871         106 KIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE--KGELKLADFGLARAKSVPT-KTYSNEVVTLWYRPPDVLLGSTEYS  182 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEECcCcceeeccCCC-ccccCceecccccChHHhcCCcccC
Confidence            345679999999999999999999999999975  4569999999986543211 11122346789999999876 4688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++||||+||++|+|++|.+||.+.+..+.
T Consensus       183 ~~~DiwslG~~l~~l~~g~~pf~~~~~~~~  212 (288)
T cd07871         183 TPIDMWGVGCILYEMATGRPMFPGSTVKEE  212 (288)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999999999999999999999988765443


No 36 
>KOG0616|consensus
Probab=99.98  E-value=9e-33  Score=303.56  Aligned_cols=227  Identities=18%  Similarity=0.329  Sum_probs=182.4

Q ss_pred             ccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccc
Q psy5279         859 ADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLC  936 (1310)
Q Consensus       859 ~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~  936 (1310)
                      ...||||.|..+  .+.++++|+..|+.|.+...  +||+.-+.-+             .......-++..|..|+.+..
T Consensus        69 g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~--~PFlv~l~~t-------------~~d~~~lymvmeyv~GGElFS  133 (355)
T KOG0616|consen   69 GNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS--HPFLVKLYGT-------------FKDNSNLYMVMEYVPGGELFS  133 (355)
T ss_pred             CceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc--CceeEEEEEe-------------eccCCeEEEEEeccCCccHHH
Confidence            567899999965  59999999999999888765  4554433322             223333344555667788888


Q ss_pred             ccccc-CCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcc
Q psy5279         937 YLPIV-IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015 (1310)
Q Consensus       937 ~L~~~-i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y 1015 (1310)
                      ++..+ -..+..+++++.||++||+|||+++|++|||||||||++.  .+++||+|||+|+++...  .  ...||||.|
T Consensus       134 ~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~--~G~iKitDFGFAK~v~~r--T--~TlCGTPeY  207 (355)
T KOG0616|consen  134 YLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ--NGHIKITDFGFAKRVSGR--T--WTLCGTPEY  207 (355)
T ss_pred             HHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc--CCcEEEEeccceEEecCc--E--EEecCCccc
Confidence            88653 2344558999999999999999999999999999999986  678999999999987532  2  334678999


Q ss_pred             cccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCc-chh
Q psy5279        1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEV-DWI 1094 (1310)
Q Consensus      1016 ~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~-~ri 1094 (1310)
                      +|||++...+|+.++|+|||||++|||+.|.+||.+.+...++++|....++||.   ..|+++++||.+++..+. .|.
T Consensus       208 LAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~---~fs~~~kdLl~~LL~vD~t~R~  284 (355)
T KOG0616|consen  208 LAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS---YFSSDAKDLLKKLLQVDLTKRF  284 (355)
T ss_pred             cChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc---ccCHHHHHHHHHHHhhhhHhhh
Confidence            9999999999999999999999999999999999999999999999999999985   568999999999887554 442


Q ss_pred             -----cHHhhhCCCcccccc
Q psy5279        1095 -----TLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1095 -----t~~e~L~H~f~~~~~ 1109 (1310)
                           ...++..|+||...+
T Consensus       285 gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  285 GNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             cCcCCCccccccCccccccc
Confidence                 345667788877443


No 37 
>KOG0033|consensus
Probab=99.98  E-value=2.4e-34  Score=308.54  Aligned_cols=232  Identities=25%  Similarity=0.402  Sum_probs=181.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .|.+.|++.++||+|.|+.||+|.++.||+.+|+|+|+.+  +....+.+.+|+.|-+.|+|||||+|++.+...+..||
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl   87 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   87 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence            5889999999999999999999999999999999999643  33466789999999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |+|+|.||+|+.-+..+..++|..+..+++||++||.|||.+||||||+||+|+|+.++. +.-|||+|||+|..+....
T Consensus        88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~  167 (355)
T KOG0033|consen   88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE  167 (355)
T ss_pred             EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence            999999999999888877899999999999999999999999999999999999998654 4579999999999988544


Q ss_pred             CCCCcccchHHHh-------------------------hhcCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhc
Q psy5279         337 KLNPLEYDVRYVR-------------------------QALRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWY  387 (1310)
Q Consensus       337 ~l~~~~~t~~yv~-------------------------~~~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~  387 (1310)
                      ..-...|||.|++                         +.++.||.+.....-    ....-+++..++..+...++|.+
T Consensus       168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lv  247 (355)
T KOG0033|consen  168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLI  247 (355)
T ss_pred             ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHH
Confidence            4444555665544                         334444443110000    00001112223333444445544


Q ss_pred             hhhhhhhcccCCCCCCccCCCcce
Q psy5279         388 GNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       388 ~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..-+.-+..+|.|+++.|.|||++
T Consensus       248 rrML~~dP~kRIta~EAL~HpWi~  271 (355)
T KOG0033|consen  248 RRMLTVNPKKRITADEALKHPWIC  271 (355)
T ss_pred             HHHhccChhhhccHHHHhCCchhc
Confidence            444444567899999999999975


No 38 
>KOG0590|consensus
Probab=99.98  E-value=1e-33  Score=346.90  Aligned_cols=152  Identities=23%  Similarity=0.397  Sum_probs=126.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEc-CCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVER-SSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k-~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ...|.+.+.||+|+|+.|..+... .+...+|+|.+....  .........|..+-+.+. |+|++++++.....+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            456788888999999999988763 445567778775443  222334456888888887 9999999999999999999


Q ss_pred             EEecCCCCchHHHh-hhcC-CCCHHHHHHHHHHHHHHHHHhh-hCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSL-TRQS-YYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l-~~~~-~lsE~~i~~ii~QIl~GL~YLH-s~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++||..||+++..+ .... ..+...+..++.|+..|+.|+| ..++.|||+||+|.+++..+. .+|++|||+|..+..
T Consensus        99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~-~l~~~df~~At~~~~  177 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS-ALKIADFGLATAYRN  177 (601)
T ss_pred             ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC-cccCCCchhhccccc
Confidence            99999999999999 5554 6888899999999999999999 999999999999999986553 799999999988765


No 39 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.98  E-value=1.1e-32  Score=303.74  Aligned_cols=106  Identities=22%  Similarity=0.404  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++...............|++.|+|||++.+..++.
T Consensus       103 ~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (287)
T cd07848         103 RSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH--NDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGK  180 (287)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCC
Confidence            345679999999999999999999999999975  457999999998765432222222235678999999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|+|||||++|+|++|.+||.+.+..+
T Consensus       181 ~~DiwslGvil~el~~g~~pf~~~~~~~  208 (287)
T cd07848         181 AVDMWSVGCILGELSDGQPLFPGESEID  208 (287)
T ss_pred             chhHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999999999998876544


No 40 
>KOG0581|consensus
Probab=99.98  E-value=4.5e-33  Score=314.27  Aligned_cols=99  Identities=28%  Similarity=0.478  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||. ++||||||||+|||+++  .++|||||||.++.+...   ....++||..|||||.+.+..|+
T Consensus       181 ~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs--kGeVKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys  255 (364)
T KOG0581|consen  181 GKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS--KGEVKICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYS  255 (364)
T ss_pred             HHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc--CCCEEeccccccHHhhhh---hcccccccccccChhhhcCCcCC
Confidence            4457799999999995 99999999999999987  567999999999876432   23445788999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++||||||+.+.||..|+.||...
T Consensus       256 ~~sDIWSLGLsllE~a~GrfP~~~~  280 (364)
T KOG0581|consen  256 VKSDIWSLGLSLLELAIGRFPYPPP  280 (364)
T ss_pred             cccceecccHHHHHHhhCCCCCCCc
Confidence            9999999999999999999999653


No 41 
>KOG0588|consensus
Probab=99.98  E-value=2.8e-32  Score=322.39  Aligned_cols=167  Identities=29%  Similarity=0.477  Sum_probs=155.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      -..|++++.||.|+-|.|.+|++..||+..|||+|.+..   ......+.+||.||+-|.|||+++|+++++....+|+|
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence            356899999999999999999999999999999998762   23455688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      +||++||+||+++.+++.++|.+++.|++||+.|+.|||..+|+||||||||+||+.++  .|||+|||+|..-.++..+
T Consensus        91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--nIKIADFGMAsLe~~gklL  168 (786)
T KOG0588|consen   91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--NIKIADFGMASLEVPGKLL  168 (786)
T ss_pred             EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--CEeeeccceeecccCCccc
Confidence            99999999999999999999999999999999999999999999999999999999776  4999999999998888899


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      .+-||.|-|+++
T Consensus       169 eTSCGSPHYA~P  180 (786)
T KOG0588|consen  169 ETSCGSPHYAAP  180 (786)
T ss_pred             cccCCCcccCCc
Confidence            999999988764


No 42 
>KOG0611|consensus
Probab=99.97  E-value=8.8e-33  Score=310.83  Aligned_cols=203  Identities=26%  Similarity=0.447  Sum_probs=174.4

Q ss_pred             cCccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         178 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       178 ~~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      .....-+|++.+.||+|.||+|.+|.+...|+.||||.|++...   ++.-.++|||+||..|+||||++++++|+..+.
T Consensus        48 khnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK  127 (668)
T KOG0611|consen   48 KHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK  127 (668)
T ss_pred             ccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence            34677899999999999999999999999999999999976543   334457899999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +.|||||..+|+|.+++...+.++|.+++.+++||.+|+.|||.++++|||||.+|||++.++  .+||+||||+..+..
T Consensus       128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~--NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN--NIKIADFGLSNLYAD  205 (668)
T ss_pred             EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC--Ceeeeccchhhhhcc
Confidence            999999999999999999999999999999999999999999999999999999999998765  799999999999998


Q ss_pred             CCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         335 FGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       335 ~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      ...++++||+|.|+     +|++--+.       |+..+         -.| | .|.++.......||.|.
T Consensus       206 ~kfLqTFCGSPLYA-----SPEIvNG~-------PY~GP---------EVDsWsLGvLLYtLVyGtMPFDG  255 (668)
T KOG0611|consen  206 KKFLQTFCGSPLYA-----SPEIVNGT-------PYKGP---------EVDSWSLGVLLYTLVYGTMPFDG  255 (668)
T ss_pred             ccHHHHhcCCcccC-----CccccCCC-------CCCCC---------ccchhhHHHHHHHHhhcccccCC
Confidence            89999999998876     46654332       22111         234 5 55666666667777766


No 43 
>KOG0594|consensus
Probab=99.97  E-value=4.2e-32  Score=305.72  Aligned_cols=175  Identities=29%  Similarity=0.426  Sum_probs=150.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCC-cceEEEEEEeCC-----
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRN-LVRLHDSYETKD-----  253 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPN-IVkL~d~f~~~~-----  253 (1310)
                      ...|+..++||+|+||+||+|+.+.+|+.||+|++.....  .......||+.+|+.|+|+| ||.|++++.+.+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            3457788889999999999999999999999999976543  34556789999999999999 999999999988     


Q ss_pred             -eEEEEEecCCCCchHHHhhhcC----CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         254 -SFTIISELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       254 -~lyLVmEy~~GGeL~~~l~~~~----~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                       .+|||+||+.. +|-..+....    .++...++.+++||+.||+|||++||+||||||+||||++++  .+||+|||+
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G--~lKlaDFGl  166 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG--VLKLADFGL  166 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC--cEeeeccch
Confidence             89999999985 6666664433    577789999999999999999999999999999999998755  899999999


Q ss_pred             ceeecCCCCCCCcccchHHHhhhcCCCccccCCCC
Q psy5279         329 SRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRK  363 (1310)
Q Consensus       329 Ar~i~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~  363 (1310)
                      |+...-+    ..++|++.+|+|||+|+++++...
T Consensus       167 Ara~~ip----~~~yt~evvTlWYRaPEvLlGs~~  197 (323)
T KOG0594|consen  167 ARAFSIP----MRTYTPEVVTLWYRAPEVLLGSTS  197 (323)
T ss_pred             HHHhcCC----cccccccEEEeeccCHHHhcCCCc
Confidence            9966432    234788889999999999888643


No 44 
>KOG0592|consensus
Probab=99.97  E-value=3e-32  Score=317.32  Aligned_cols=233  Identities=19%  Similarity=0.322  Sum_probs=175.8

Q ss_pred             cCCCchhhHhHHHHHhhhcCCCCCceeecceeeee-eeCCEEEEEE-eccCCCcceeeecccCCccccccccc-CCCchh
Q psy5279         871 IGTRPEAHVEADALIESRRDGHAPFFREKPITIPV-VIGDKLEMKC-LAVGEPKPVIQWFKLGTSTLCYLPIV-IPTTHK  947 (1310)
Q Consensus       871 ~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l-~~g~~l~~~~-l~~G~p~~vi~~f~~g~~l~~~L~~~-i~~~~~  947 (1310)
                      .+..|++.+.++.+|.+++..++  -||+..|..+ .|+.++.+.+ .++......+-.|..+|+++.+|... -..+..
T Consensus        98 ~keYAiKVl~K~~Iike~KvkYV--~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~c  175 (604)
T KOG0592|consen   98 GKEYAIKVLDKRYIIKEKKVKYV--TREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETC  175 (604)
T ss_pred             CceeeHhhhhHHHHHhhcccchh--hHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHH
Confidence            34444444444555544444433  3444444444 4444554444 34444444444455566666666433 344556


Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc----------ccc--cCCCCCCcc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT----------LIH--PINTPNPEF 1015 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~----------~~~--~~~tGtp~Y 1015 (1310)
                      ++|++.||++||+|||++|||||||||||||++.  ++++||+|||.|+.+.+...          ...  ..+.||..|
T Consensus       176 aR~YAAeIldAleylH~~GIIHRDlKPENILLd~--dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeY  253 (604)
T KOG0592|consen  176 ARFYAAEILDALEYLHSNGIIHRDLKPENILLDK--DGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEY  253 (604)
T ss_pred             HHHHHHHHHHHHHHHHhcCceeccCChhheeEcC--CCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecc
Confidence            8999999999999999999999999999999986  67899999999987643211          111  346789999


Q ss_pred             cccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchh
Q psy5279        1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWI 1094 (1310)
Q Consensus      1016 ~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~ri 1094 (1310)
                      ++||++.....+..+|+|+||||||+|+.|.+||.+.++-.++++|....|.|+.   ..++.+++|+.+||. ++.+|+
T Consensus       254 VSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~---~fp~~a~dLv~KLLv~dp~~Rl  330 (604)
T KOG0592|consen  254 VSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE---GFPEDARDLIKKLLVRDPSDRL  330 (604)
T ss_pred             cCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC---CCCHHHHHHHHHHHccCccccc
Confidence            9999999999999999999999999999999999999999999999999999986   456899999999886 677899


Q ss_pred             cHHhhhCCCccccccc
Q psy5279        1095 TLANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1095 t~~e~L~H~f~~~~~l 1110 (1310)
                      ++.++..|+||...+.
T Consensus       331 t~~qIk~HpFF~~Vdw  346 (604)
T KOG0592|consen  331 TSQQIKAHPFFEGVDW  346 (604)
T ss_pred             cHHHHhhCcccccCCh
Confidence            9999999999987554


No 45 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97  E-value=1.6e-32  Score=309.23  Aligned_cols=105  Identities=21%  Similarity=0.434  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccC--C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE--E 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~--~ 1024 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.......  .......|++.|+|||++.+  .
T Consensus       106 ~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  183 (338)
T cd07859         106 QFFLYQLLRALKYIHTANVFHRDLKPKNILANA--DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS  183 (338)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhcccc
Confidence            345679999999999999999999999999975  56799999999875422111  11122357899999999876  5


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++.++|||||||++|+|++|.+||.+.+..
T Consensus       184 ~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~  214 (338)
T cd07859         184 KYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV  214 (338)
T ss_pred             ccCchhHHHHHHHHHHHHHcCCCCCCCCChH
Confidence            7889999999999999999999999876543


No 46 
>KOG0585|consensus
Probab=99.97  E-value=7.7e-33  Score=317.81  Aligned_cols=164  Identities=24%  Similarity=0.415  Sum_probs=134.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccC----CcccccCCCCCCcccccccc
Q psy5279         946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL----GTLIHPINTPNPEFAAPEVL 1021 (1310)
Q Consensus       946 ~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~----g~~~~~~~tGtp~Y~APEvl 1021 (1310)
                      ..++.+++.++.||+|||.+|||||||||.|+||++  +++|||+|||.+......    ....-....|||.|||||.+
T Consensus       210 ~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~--~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c  287 (576)
T KOG0585|consen  210 QQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSS--DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELC  287 (576)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcC--CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhh
Confidence            346778899999999999999999999999999986  478999999988654211    11111124688999999876


Q ss_pred             cCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhC
Q psy5279        1022 AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNID 1101 (1310)
Q Consensus      1022 ~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~ 1101 (1310)
                      .++.-                      |                                                    
T Consensus       288 ~~~~~----------------------~----------------------------------------------------  293 (576)
T KOG0585|consen  288 SGGNS----------------------F----------------------------------------------------  293 (576)
T ss_pred             cCCCC----------------------c----------------------------------------------------
Confidence            54210                      0                                                    


Q ss_pred             CCcccccccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCCh
Q psy5279        1102 HEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1181 (1310)
Q Consensus      1102 H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~ 1181 (1310)
                                                                       --.+.+.||||+||.+|.||.|..||.++..
T Consensus       294 -------------------------------------------------~~~g~a~DiWalGVTLYCllfG~~PF~~~~~  324 (576)
T KOG0585|consen  294 -------------------------------------------------SYSGFALDIWALGVTLYCLLFGQLPFFDDFE  324 (576)
T ss_pred             -------------------------------------------------cccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence                                                             0034567999999999999999999999999


Q ss_pred             hhhhhcccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1182 PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1182 ~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      .+++..|....+.||.. .++++++||+|.+||.+||.+|+|+.++..|||+..
T Consensus       325 ~~l~~KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  325 LELFDKIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             HHHHHHHhcCcccCCCc-ccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence            99999999999999854 479999999999999999999999999999999943


No 47 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97  E-value=1.2e-32  Score=312.92  Aligned_cols=98  Identities=26%  Similarity=0.513  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++......    ....|++.|+|||++.+..++.+
T Consensus       122 ~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~  195 (329)
T PTZ00263        122 FYHAELVLAFEYLHSKDIIYRDLKPENLLLDN--KGHVKVTDFGFAKKVPDRT----FTLCGTPEYLAPEVIQSKGHGKA  195 (329)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCHHHEEECC--CCCEEEeeccCceEcCCCc----ceecCChhhcCHHHHcCCCCCCc
Confidence            34569999999999999999999999999985  4579999999987654321    12357799999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +|||||||++|+|++|..||.+.+
T Consensus       196 ~DiwslG~il~elltg~~pf~~~~  219 (329)
T PTZ00263        196 VDWWTMGVLLYEFIAGYPPFFDDT  219 (329)
T ss_pred             ceeechHHHHHHHHcCCCCCCCCC
Confidence            999999999999999999997654


No 48 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97  E-value=4.5e-32  Score=299.23  Aligned_cols=105  Identities=27%  Similarity=0.422  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++.......  ......|++.|+|||++.+..++.
T Consensus       113 ~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~  188 (290)
T cd07862         113 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYAT  188 (290)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC--CCCEEEccccceEeccCCc--ccccccccccccChHHHhCCCCCC
Confidence            345679999999999999999999999999975  4579999999987654321  122335679999999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|.+||.+.+..+.
T Consensus       189 ~~DiwslG~il~el~~g~~~f~~~~~~~~  217 (290)
T cd07862         189 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQ  217 (290)
T ss_pred             ccchHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence            99999999999999999999998765544


No 49 
>KOG0585|consensus
Probab=99.97  E-value=1.9e-31  Score=306.38  Aligned_cols=238  Identities=22%  Similarity=0.323  Sum_probs=177.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--------------chHHHHHHHHHHHHhcCCCCcceE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--------------QYKSLFKNELDIMNQLCHRNLVRL  245 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--------------~~~~~~~rEI~IL~~L~HPNIVkL  245 (1310)
                      ..-+.|++.++||+|.||+|.+|++..+++.||||++.++..              ...+.+.+||.||++|+|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            345779999999999999999999999999999999975321              123568899999999999999999


Q ss_pred             EEEEEeC--CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEE
Q psy5279         246 HDSYETK--DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL  323 (1310)
Q Consensus       246 ~d~f~~~--~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKL  323 (1310)
                      +++..++  +.+|||+|||..|++...-....-+++.+++.|++++..||+|||.+|||||||||+|+||++++  +|||
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g--~VKI  251 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG--TVKI  251 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC--cEEe
Confidence            9999876  57999999999999977655443399999999999999999999999999999999999998775  8999


Q ss_pred             EeeccceeecCC------CCCCCcccchHHHhhhcCCC-----ccccC---------------CCCCCCCCCCcchhhhh
Q psy5279         324 TDFGLSRRITSF------GKLNPLEYDVRYVRQALRHP-----WLNFA---------------DRKPTEDTPKLNTDALR  377 (1310)
Q Consensus       324 sDFGLAr~i~~~------~~l~~~~~t~~yv~~~~r~P-----~l~~~---------------~~~~~~~~p~~~~~~~~  377 (1310)
                      +|||.+-.....      ..+..-.|||.|.++..++.     +.+++               ...|.+  ..+..+.+.
T Consensus       252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~--~~~~~~l~~  329 (576)
T KOG0585|consen  252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF--DDFELELFD  329 (576)
T ss_pred             eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc--cchHHHHHH
Confidence            999999765221      12333456766665543332     11111               001100  111111111


Q ss_pred             -------------hhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCCCCCC
Q psy5279         378 -------------NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTP  421 (1310)
Q Consensus       378 -------------~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp  421 (1310)
                                   +++..++|.+-..+-++...|+++.++-.|||++.-....+.+.
T Consensus       330 KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~~~s~  386 (576)
T KOG0585|consen  330 KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSPQSSE  386 (576)
T ss_pred             HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCCccCC
Confidence                         23445577777777778899999999999999976544334443


No 50 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97  E-value=2.3e-32  Score=309.40  Aligned_cols=102  Identities=25%  Similarity=0.455  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~--~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05571          98 RFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK--DGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             HHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEeeCCCCcccccCCC-cccceecCccccChhhhcCCCCCc
Confidence            344569999999999999999999999999975  45699999999875322221 112235789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       175 ~~DiwSlG~il~elltg~~Pf~~~~  199 (323)
T cd05571         175 AVDWWGLGVVMYEMMCGRLPFYNQD  199 (323)
T ss_pred             cccCcccchhhhhhhcCCCCCCCCC
Confidence            9999999999999999999997654


No 51 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97  E-value=5e-32  Score=302.51  Aligned_cols=102  Identities=22%  Similarity=0.425  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++........ ......+++.|+|||++.+. .++
T Consensus       106 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  182 (303)
T cd07869         106 KLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD--TGELKLADFGLARAKSVPSH-TYSNEVVTLWYRPPDVLLGSTEYS  182 (303)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECCCCcceeccCCCc-cCCCCcccCCCCChHHHcCCCCCC
Confidence            445779999999999999999999999999975  45699999999865432111 11223567899999998764 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++|||||||++|+|++|..||.+..
T Consensus       183 ~~~DiwslG~il~~l~~g~~pf~~~~  208 (303)
T cd07869         183 TCLDMWGVGCIFVEMIQGVAAFPGMK  208 (303)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            89999999999999999999998753


No 52 
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97  E-value=2e-31  Score=307.48  Aligned_cols=107  Identities=26%  Similarity=0.413  Sum_probs=87.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++...............+++.|+|||++.+. .++
T Consensus       106 ~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  183 (372)
T cd07853         106 KVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS--NCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYT  183 (372)
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC--CCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCC
Confidence            445679999999999999999999999999985  56799999999876533222222223467899999999875 478


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++||||+||++|+|++|..||.+.+....
T Consensus       184 ~~~DiwslG~il~el~~g~~pf~~~~~~~~  213 (372)
T cd07853         184 SAVDIWSVGCIFAELLGRRILFQAQSPIQQ  213 (372)
T ss_pred             cHHHHHhHHHHHHHHHcCCCCCCCCCHHHH
Confidence            899999999999999999999988765443


No 53 
>KOG0694|consensus
Probab=99.97  E-value=6.1e-32  Score=321.93  Aligned_cols=268  Identities=20%  Similarity=0.324  Sum_probs=209.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+.|.+.++||+|+||+|+++..+.|++.||||++++..-   ...+..+.|-.|+.... ||.+++|+.+|++++++|+
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f  446 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF  446 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence            4789999999999999999999999999999999987532   34556778888887774 9999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~~  336 (1310)
                      ||||+.||+++ .+...+.|+|..++.|++.|+.||+|||++||||||||.+||||+.+|  ++||+||||+|.-. ...
T Consensus       447 vmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG--h~kiADFGlcKe~m~~g~  523 (694)
T KOG0694|consen  447 VMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG--HVKIADFGLCKEGMGQGD  523 (694)
T ss_pred             EEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC--cEEecccccccccCCCCC
Confidence            99999999954 444556799999999999999999999999999999999999999877  99999999999765 444


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCC
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPG  416 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~  416 (1310)
                      ...++||||.|++     |+++              .+   .-|+.+.|||+.             .+|.+.++.+-+|+
T Consensus       524 ~TsTfCGTpey~a-----PEil--------------~e---~~Yt~aVDWW~l-------------GVLlyeML~Gq~PF  568 (694)
T KOG0694|consen  524 RTSTFCGTPEFLA-----PEVL--------------TE---QSYTRAVDWWGL-------------GVLLYEMLVGESPF  568 (694)
T ss_pred             ccccccCChhhcC-----hhhh--------------cc---CcccchhhHHHH-------------HHHHHHHHcCCCCC
Confidence            6778999999986     4443              12   238889999998             78888898888898


Q ss_pred             CCCCCCCCCcceecccccccccccccccCCCCCCCcc-cccCCCCCCCCc--hhhHHHHhccCCCHHHHHHHHHHHHHHh
Q psy5279         417 TQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKT-WEDNVPNRGPGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGL  493 (1310)
Q Consensus       417 ~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~-~~d~v~e~~~~~--el~~~~~~~~~~~e~~~~~~~~qi~~~~  493 (1310)
                      .+..-+...+.| ++.+-+    -+-.+++.+-+|.. ++..+|+++-|-  -=.+-|+++-+|-+=+            
T Consensus       569 ~gddEee~FdsI-~~d~~~----yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~------------  631 (694)
T KOG0694|consen  569 PGDDEEEVFDSI-VNDEVR----YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID------------  631 (694)
T ss_pred             CCCCHHHHHHHH-hcCCCC----CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC------------
Confidence            888766666665 444443    33344555534433 337788877663  1134455555443322            


Q ss_pred             hhhccCCceecCCCC
Q psy5279         494 DYMHRLSIAHLGLTP  508 (1310)
Q Consensus       494 ~y~H~~~i~hrDlkp  508 (1310)
                       |   ..+.+|++||
T Consensus       632 -w---~~L~~r~i~P  642 (694)
T KOG0694|consen  632 -W---DDLLNRRIKP  642 (694)
T ss_pred             -H---HHHhhccCCC
Confidence             1   1256899999


No 54 
>KOG0580|consensus
Probab=99.97  E-value=2.7e-32  Score=293.07  Aligned_cols=152  Identities=24%  Similarity=0.471  Sum_probs=127.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      +.+++|++.||.|||.++||||||||+|+|++.  .+.+|++|||.+.... .+..  .+.|||..|.+||..       
T Consensus       127 a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~--~~~lkiAdfGwsV~~p-~~kR--~tlcgt~dyl~pEmv-------  194 (281)
T KOG0580|consen  127 ATYIKQLANALLYCHLKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAP-SNKR--KTLCGTLDYLPPEMV-------  194 (281)
T ss_pred             hHHHHHHHHHHHHhccCCcccCCCCHHHhccCC--CCCeeccCCCceeecC-CCCc--eeeecccccCCHhhc-------
Confidence            445679999999999999999999999999987  4569999999886543 2322  233455666666543       


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                                                                                                      
T Consensus       195 --------------------------------------------------------------------------------  194 (281)
T KOG0580|consen  195 --------------------------------------------------------------------------------  194 (281)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcc
Q psy5279        1109 DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1188 (1310)
Q Consensus      1109 ~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I 1188 (1310)
                                                              ...+++..||+|++||++|++|+|.+||...+..++++.|
T Consensus       195 ----------------------------------------~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI  234 (281)
T KOG0580|consen  195 ----------------------------------------EGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRI  234 (281)
T ss_pred             ----------------------------------------CCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHH
Confidence                                                    3445677889999999999999999999999999999999


Q ss_pred             cccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1189 NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1189 ~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      ...++.||   ..||.+|+|||++||+++|.+|++..|+++|||+..
T Consensus       235 ~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  235 RKVDLKFP---STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HHccccCC---cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence            99999988   689999999999999999999999999999999864


No 55 
>KOG0660|consensus
Probab=99.97  E-value=1e-31  Score=302.27  Aligned_cols=112  Identities=23%  Similarity=0.443  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAE-EP 1025 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~-~~ 1025 (1310)
                      ..|++.||+.||.|+|+.||+||||||.|+|++.  ++.+||||||+|+....... ...+-..-|.+|+|||++.. ..
T Consensus       127 ~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~--~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~  204 (359)
T KOG0660|consen  127 AQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA--DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSE  204 (359)
T ss_pred             HHHHHHHHHHhcchhhcccccccccchhheeecc--CCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhcccc
Confidence            5788899999999999999999999999999986  56799999999987653211 11122234689999999865 47


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      |+...||||+|||+.|||+|++-|.|.+.-...+.|
T Consensus       205 Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI  240 (359)
T KOG0660|consen  205 YTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLI  240 (359)
T ss_pred             ccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHH
Confidence            999999999999999999999999998766554443


No 56 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97  E-value=4.3e-32  Score=311.11  Aligned_cols=100  Identities=22%  Similarity=0.440  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......    ....||+.|||||++.+..++.
T Consensus       134 ~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~ikL~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~  207 (340)
T PTZ00426        134 CFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK--DGFIKMTDFGFAKVVDTRT----YTLCGTPEYIAPEILLNVGHGK  207 (340)
T ss_pred             HHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCEEEecCCCCeecCCCc----ceecCChhhcCHHHHhCCCCCc
Confidence            345679999999999999999999999999975  5679999999987653211    2235789999999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|.+||.+.+.
T Consensus       208 ~~DiwSlGvil~ell~G~~Pf~~~~~  233 (340)
T PTZ00426        208 AADWWTLGIFIYEILVGCPPFYANEP  233 (340)
T ss_pred             cccccchhhHHHHHhcCCCCCCCCCH
Confidence            99999999999999999999976543


No 57 
>KOG0578|consensus
Probab=99.97  E-value=4e-31  Score=310.19  Aligned_cols=103  Identities=30%  Similarity=0.603  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .+.++++++.||+|||.+||+|||||.+|||++.  ++.|||+|||++.++..... ....-.|||+|||||++....|+
T Consensus       371 IA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~--~g~vKltDFGFcaqi~~~~~-KR~TmVGTPYWMAPEVvtrk~YG  447 (550)
T KOG0578|consen  371 IAAICREILQGLKFLHARGIIHRDIKSDNILLTM--DGSVKLTDFGFCAQISEEQS-KRSTMVGTPYWMAPEVVTRKPYG  447 (550)
T ss_pred             HHHHHHHHHHHHHHHHhcceeeeccccceeEecc--CCcEEEeeeeeeeccccccC-ccccccCCCCccchhhhhhcccC
Confidence            5667889999999999999999999999999986  44599999999988765443 33445789999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +++||||||++++||+-|++||...+
T Consensus       448 ~KVDIWSLGIMaIEMveGEPPYlnE~  473 (550)
T KOG0578|consen  448 PKVDIWSLGIMAIEMVEGEPPYLNEN  473 (550)
T ss_pred             ccccchhhhhHHHHHhcCCCCccCCC
Confidence            99999999999999999999997543


No 58 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97  E-value=9.8e-32  Score=302.54  Aligned_cols=101  Identities=26%  Similarity=0.441  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... ......||+.|+|||++.+..++.+
T Consensus        97 ~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~  173 (312)
T cd05585          97 FYTAELLCALENLHKFNVIYRDLKPENILLDY--QGHIALCDFGLCKLNMKDDD-KTNTFCGTPEYLAPELLLGHGYTKA  173 (312)
T ss_pred             HHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC--CCcEEEEECcccccCccCCC-ccccccCCcccCCHHHHcCCCCCCc
Confidence            34569999999999999999999999999975  45799999999875322211 1223457899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +|||||||++|+|++|..||.+.+
T Consensus       174 ~DvwslGvil~el~tg~~pf~~~~  197 (312)
T cd05585         174 VDWWTLGVLLYEMLTGLPPFYDEN  197 (312)
T ss_pred             cceechhHHHHHHHhCCCCcCCCC
Confidence            999999999999999999997654


No 59 
>KOG0660|consensus
Probab=99.97  E-value=2.6e-31  Score=299.07  Aligned_cols=176  Identities=25%  Similarity=0.395  Sum_probs=146.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEec--CCcchHHHHHHHHHHHHhcCCCCcceEEEEEEe-----C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDSYET-----K  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~--~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~-----~  252 (1310)
                      .+..+|...+.||+|+||.|+.|.++.||+.||||.|..  ......+...||+.+|+.++|+|||.+++++..     -
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            345667778999999999999999999999999999863  233344557799999999999999999999976     3


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      +.+|+|+|+|+ .+|...+..+..+++..++.+++||+.||+|+|+.||+||||||.|+|++.+.  .+|||||||||..
T Consensus        99 ~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c--~lKI~DFGLAR~~  175 (359)
T KOG0660|consen   99 NDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC--DLKICDFGLARYL  175 (359)
T ss_pred             ceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC--CEEeccccceeec
Confidence            57999999994 47777776665699999999999999999999999999999999999998655  7899999999998


Q ss_pred             cCCCCCCCcccchHHHhhhcCCCccccC
Q psy5279         333 TSFGKLNPLEYDVRYVRQALRHPWLNFA  360 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~~~r~P~l~~~  360 (1310)
                      .+.  -.....|--.+|.|||+|++.++
T Consensus       176 ~~~--~~~~~mTeYVaTRWYRAPElll~  201 (359)
T KOG0660|consen  176 DKF--FEDGFMTEYVATRWYRAPELLLN  201 (359)
T ss_pred             ccc--CcccchhcceeeeeecCHHHHhc
Confidence            653  11112233347899999998777


No 60 
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97  E-value=2.9e-31  Score=304.92  Aligned_cols=106  Identities=24%  Similarity=0.432  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||+|||++||+||||||+|||++.  +..+||+|||+++......  ......+++.|+|||++.+..++.+
T Consensus       130 ~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~  205 (364)
T cd07875         130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKEN  205 (364)
T ss_pred             HHHHHHHHHHHHHhhCCeecCCCCHHHEEECC--CCcEEEEeCCCccccCCCC--cccCCcccCCcCCHHHHhCCCCCch
Confidence            45679999999999999999999999999975  4579999999987543221  1122356799999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      +|||||||++|+|++|..||.+.+..+...
T Consensus       206 ~DiwSlG~il~ell~g~~pf~~~~~~~~~~  235 (364)
T cd07875         206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWN  235 (364)
T ss_pred             hhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            999999999999999999999877655433


No 61 
>KOG4717|consensus
Probab=99.97  E-value=1.7e-31  Score=306.62  Aligned_cols=210  Identities=22%  Similarity=0.356  Sum_probs=177.2

Q ss_pred             CceeecceeeeeeeCCEEEEE-EeccCCCcceeeecccCCcccccccc--cCCCchhHHHHHHHHHHHHHHHHHCCceec
Q psy5279         894 PFFREKPITIPVVIGDKLEMK-CLAVGEPKPVIQWFKLGTSTLCYLPI--VIPTTHKDAYCVTSVLDGLQYLHWRGLCHL  970 (1310)
Q Consensus       894 ~ffrE~~~~~~l~~g~~l~~~-~l~~G~p~~vi~~f~~g~~l~~~L~~--~i~~~~~~~~i~~QIl~AL~yLHs~gIVHR  970 (1310)
                      -.|.|++.|.-|.|++++.+. .+.......++-.+-.++.++.|+-.  .-..+..+.-+|+||+.|+.|||+..+|||
T Consensus        63 hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHR  142 (864)
T KOG4717|consen   63 HLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHR  142 (864)
T ss_pred             HHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcc
Confidence            469999999999999999654 45556666778888888888888732  234566788899999999999999999999


Q ss_pred             ccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCC
Q psy5279         971 NIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus       971 DLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      ||||||+++-.. -+-|||.|||++-.+.+.....+.|  |+..|.|||++.+..|+                       
T Consensus       143 DLKPENVVFFEK-lGlVKLTDFGFSNkf~PG~kL~TsC--GSLAYSAPEILLGDsYD-----------------------  196 (864)
T KOG4717|consen  143 DLKPENVVFFEK-LGLVKLTDFGFSNKFQPGKKLTTSC--GSLAYSAPEILLGDSYD-----------------------  196 (864)
T ss_pred             cCCcceeEEeee-cCceEeeeccccccCCCcchhhccc--chhhccCchhhhcCccC-----------------------
Confidence            999999988653 4679999999997776655555554  55888888887654321                       


Q ss_pred             CCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcc
Q psy5279        1051 GQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSE 1130 (1310)
Q Consensus      1051 g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~ 1130 (1310)
                                                                                                      
T Consensus       197 --------------------------------------------------------------------------------  196 (864)
T KOG4717|consen  197 --------------------------------------------------------------------------------  196 (864)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhccCHHHHHHH
Q psy5279        1131 KGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFL 1210 (1310)
Q Consensus      1131 ~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI 1210 (1310)
                                             -++|||||+|||+|+|.||.+||.-.++.||+..|+.++|..|   ..+|.+|||||
T Consensus       197 -----------------------APAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP---shvS~eCrdLI  250 (864)
T KOG4717|consen  197 -----------------------APAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP---SHVSKECRDLI  250 (864)
T ss_pred             -----------------------CcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc---hhhhHHHHHHH
Confidence                                   2578999999999999999999999999999999999999987   68999999999


Q ss_pred             HHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1211 MLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1211 ~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      .+||++||.+|.|++|+-.|+|+++
T Consensus       251 ~sMLvRdPkkRAslEeI~s~~Wlq~  275 (864)
T KOG4717|consen  251 QSMLVRDPKKRASLEEIVSTSWLQA  275 (864)
T ss_pred             HHHHhcCchhhccHHHHhccccccC
Confidence            9999999999999999999999965


No 62 
>KOG4236|consensus
Probab=99.97  E-value=4.7e-31  Score=303.59  Aligned_cols=234  Identities=24%  Similarity=0.344  Sum_probs=183.6

Q ss_pred             ccCCCeee--eceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE
Q psy5279         180 PITDAYDF--GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       180 ~~~d~Y~i--~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l  255 (1310)
                      .+...|++  .++||+|.||+||-|+++.||+.||||+|.+..  .+....+++|++||++++||.||.|.-.|++++.+
T Consensus       559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~erv  638 (888)
T KOG4236|consen  559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERV  638 (888)
T ss_pred             hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceE
Confidence            45566766  478999999999999999999999999998643  23456789999999999999999999999999999


Q ss_pred             EEEEecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC-CeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~-~~VKLsDFGLAr~i~  333 (1310)
                      +.|||-+.|..|.-.+.. .+.++|...++++.||+.||.|||.+||+|+||||||||+.+..+ .++||||||+||.+.
T Consensus       639 FVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg  718 (888)
T KOG4236|consen  639 FVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG  718 (888)
T ss_pred             EEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecc
Confidence            999999987666555543 467999999999999999999999999999999999999987654 489999999999999


Q ss_pred             CCCCCCCcccchHHHhhhc-C-C--------------------CccccCCCCCCCC-----CCCcchhhhhhhcccchhh
Q psy5279         334 SFGKLNPLEYDVRYVRQAL-R-H--------------------PWLNFADRKPTED-----TPKLNTDALRNYYNLYKDW  386 (1310)
Q Consensus       334 ~~~~l~~~~~t~~yv~~~~-r-~--------------------P~l~~~~~~~~~~-----~p~~~~~~~~~~~~~~~D~  386 (1310)
                      +.+.-.+.+|||.|+++.. | .                    .-.+|+..+...+     .-...+..++.+...+-|+
T Consensus       719 EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~Aidl  798 (888)
T KOG4236|consen  719 EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDL  798 (888)
T ss_pred             hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHH
Confidence            8888889999999977521 1 0                    0011111110000     0011223344455556777


Q ss_pred             chhhhhhhcccCCCCCCccCCCcceec
Q psy5279         387 YGNAAVRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       387 ~~~~~l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                      +.+++.-.+.+|++++.|+.|||+-.+
T Consensus       799 In~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  799 INNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHHHHHHHHHhcchHhhccchhhhcc
Confidence            777777778999999999999998433


No 63 
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97  E-value=1.8e-31  Score=312.31  Aligned_cols=101  Identities=26%  Similarity=0.357  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++|||||||||+|||++.  .+.+||+|||+++..............||+.|+|||++.+..++.+
T Consensus       186 ~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~--~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  263 (391)
T PHA03212        186 AIERSVLRAIQYLHENRIIHRDIKAENIFINH--PGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPA  263 (391)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCChHhEEEcC--CCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcH
Confidence            45679999999999999999999999999975  4569999999986432221112223457899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +|||||||++|+|++|..||.+.
T Consensus       264 ~DiwSlGvil~elltg~~p~~~~  286 (391)
T PHA03212        264 VDIWSAGIVLFEMATCHDSLFEK  286 (391)
T ss_pred             HHHHHHHHHHHHHHHCCCCcCCc
Confidence            99999999999999999887653


No 64 
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97  E-value=3.7e-31  Score=291.28  Aligned_cols=105  Identities=28%  Similarity=0.418  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.........  ....+++.|+|||++.+..++
T Consensus       110 ~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~  185 (288)
T cd07863         110 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGQVKLADFGLARIYSCQMAL--TPVVVTLWYRAPEVLLQSTYA  185 (288)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECccCccccccCcccC--CCccccccccCchHhhCCCCC
Confidence            3445779999999999999999999999999975  456999999998755322111  123467899999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++||||+||++|+|++|.+||.+.+...
T Consensus       186 ~~~DiwslG~~l~~l~~g~~~f~~~~~~~  214 (288)
T cd07863         186 TPVDMWSVGCIFAEMFRRKPLFCGNSEAD  214 (288)
T ss_pred             CcchhhhHHHHHHHHHhCCcCcCCCCHHH
Confidence            99999999999999999999998765443


No 65 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97  E-value=9.1e-32  Score=304.56  Aligned_cols=99  Identities=27%  Similarity=0.409  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++..............||+.|+|||++.+. .++.
T Consensus       109 ~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~--~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  186 (332)
T cd05614         109 FYSGEIILALEHLHKLGIVYRDIKLENILLDS--EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGK  186 (332)
T ss_pred             HHHHHHHHHHHHHHHCCcEecCCCHHHeEECC--CCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCC
Confidence            34569999999999999999999999999986  45799999999875433222222234578999999998765 4677


Q ss_pred             ccchhHHHHHHHHHhcCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      ++|||||||++|+|++|..||.
T Consensus       187 ~~DiwslG~il~elltg~~pf~  208 (332)
T cd05614         187 AVDWWSLGILIFELLTGASPFT  208 (332)
T ss_pred             ccccccchhhhhhhhcCCCCCC
Confidence            8899999999999999988884


No 66 
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97  E-value=6.6e-31  Score=300.61  Aligned_cols=105  Identities=23%  Similarity=0.393  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.......  .....+++.|+|||++.+..++.
T Consensus       122 ~~~~~qi~~aL~~LH~~givHrDikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~  197 (355)
T cd07874         122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKE  197 (355)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCChHHEEECC--CCCEEEeeCcccccCCCccc--cCCccccCCccCHHHHcCCCCCc
Confidence            345679999999999999999999999999975  45799999999875432211  12235679999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|..||.+.+..+.
T Consensus       198 ~~DiwslG~il~el~~g~~pf~~~~~~~~  226 (355)
T cd07874         198 NVDIWSVGCIMGEMVRHKILFPGRDYIDQ  226 (355)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            99999999999999999999988765443


No 67 
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97  E-value=2.5e-31  Score=315.54  Aligned_cols=107  Identities=21%  Similarity=0.394  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      ...++.||+.||+|||++||+||||||+|||++.. ...+||+|||+|+.........  ...||+.|+|||++.+. .|
T Consensus       172 ~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~-~~~vkL~DFGla~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~  248 (440)
T PTZ00036        172 VKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN-THTLKLCDFGSAKNLLAGQRSV--SYICSRFYRAPELMLGATNY  248 (440)
T ss_pred             HHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC-CCceeeeccccchhccCCCCcc--cCCCCcCccCHHHhcCCCCC
Confidence            34567899999999999999999999999999752 3469999999997654322221  23467999999998764 68


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +.++|||||||++|+|++|.+||.+.+..+.
T Consensus       249 ~~~~DiwSlGvil~elltG~~pf~~~~~~~~  279 (440)
T PTZ00036        249 TTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ  279 (440)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            9999999999999999999999998765543


No 68 
>KOG0580|consensus
Probab=99.97  E-value=1.1e-31  Score=288.45  Aligned_cols=227  Identities=26%  Similarity=0.344  Sum_probs=183.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      -++|++++.||+|.||.||+|+.+.++-.||+|++-+..   .+....+.||++|-..|+||||++++++|.+...+||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            367899999999999999999999999999999997642   24556789999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhh--hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         259 SELAGGGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~--~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +||..+|+|+..+.  ....++|..+..|++|++.||.|||.++||||||||+|+|++.++  .+||+|||.+-.- +.+
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~--~lkiAdfGwsV~~-p~~  177 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHA-PSN  177 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC--CeeccCCCceeec-CCC
Confidence            99999999999998  556699999999999999999999999999999999999998876  7999999999654 467


Q ss_pred             CCCCcccchHHHhhhcCCCccccC--CCC--------CCCCCCCcchhhhh---------------hhcccchhhchhhh
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFA--DRK--------PTEDTPKLNTDALR---------------NYYNLYKDWYGNAA  391 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~--~~~--------~~~~~p~~~~~~~~---------------~~~~~~~D~~~~~~  391 (1310)
                      .-.++|||..|..+.+..+-....  |..        -+...|+|+.+.-+               .+..-++|.++.++
T Consensus       178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll  257 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLL  257 (281)
T ss_pred             CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHh
Confidence            778999998877543322110000  000        00011333222221               12234578889999


Q ss_pred             hhhcccCCCCCCccCCCcce
Q psy5279         392 VRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       392 l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +.+...|++..+.+.|||+.
T Consensus       258 ~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  258 VKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             ccCccccccHHHHhhhHHHH
Confidence            99999999999999999974


No 69 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97  E-value=1.7e-31  Score=306.14  Aligned_cols=159  Identities=22%  Similarity=0.375  Sum_probs=125.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------------------------ 1004 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------------------------ 1004 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.+......                        
T Consensus       104 ~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (364)
T cd05599         104 RFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA--KGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSS  181 (364)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEeecccceeccccccccccccccccccccccccccccccc
Confidence            345679999999999999999999999999975  557999999998654221100                        


Q ss_pred             -------------cccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccc-
Q psy5279        1005 -------------IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY- 1070 (1310)
Q Consensus      1005 -------------~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~- 1070 (1310)
                                   ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+......+.. 
T Consensus       182 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~  261 (364)
T cd05599         182 KRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFP  261 (364)
T ss_pred             cccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCC
Confidence                         001134789999999999999999999999999999999999999998877766655433222221 


Q ss_pred             cchhccHHHHHHHHHhccCCcchhc---HHhhhCCCcccccc
Q psy5279        1071 LFKELTQEATRFLMLIFKHEVDWIT---LANNIDHEFWHVKD 1109 (1310)
Q Consensus      1071 ~~~~lS~eakdLL~~il~~~~~rit---~~e~L~H~f~~~~~ 1109 (1310)
                      ....+++++++||.+|+.++.+|++   +.+++.|+||...+
T Consensus       262 ~~~~~s~~~~~li~~ll~~p~~R~~~~~~~~ll~h~~~~~~~  303 (364)
T cd05599         262 DEVPLSPEAKDLIKRLCCEAERRLGNNGVNEIKSHPFFKGVD  303 (364)
T ss_pred             CCCCCCHHHHHHHHHHccCHhhcCCCCCHHHHhcCCCcCCCC
Confidence            1125789999999999988888997   99999999987644


No 70 
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97  E-value=6.2e-31  Score=294.73  Aligned_cols=106  Identities=22%  Similarity=0.317  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec--CCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV--RSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~--~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      +..++.||+.||+|||++||+||||||+|||+...  ....+||+|||+++........  ......+|+.|+|||++.+
T Consensus       110 ~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07868         110 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             HHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcC
Confidence            45678899999999999999999999999999542  2457999999999765322111  1122356789999999987


Q ss_pred             C-CCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1024 E-PIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1024 ~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      . .++.++||||+||++|+|++|.+||.+..
T Consensus       190 ~~~~~~~~DiwslG~il~el~~g~~~f~~~~  220 (317)
T cd07868         190 ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             CCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence            4 58899999999999999999999998654


No 71 
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97  E-value=5.8e-31  Score=301.86  Aligned_cols=103  Identities=25%  Similarity=0.456  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......  ......+|+.|+|||++.+..++.+
T Consensus       127 ~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~--~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~  202 (359)
T cd07876         127 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNF--MMTPYVVTRYYRAPEVILGMGYKEN  202 (359)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEecCCCccccccCc--cCCCCcccCCCCCchhccCCCCCcc
Confidence            45679999999999999999999999999985  4679999999986543221  1222356789999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      +|||||||++|+|++|..||.+.+...
T Consensus       203 ~DiwSlG~il~el~tg~~pf~~~~~~~  229 (359)
T cd07876         203 VDIWSVGCIMGELVKGSVIFQGTDHID  229 (359)
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            999999999999999999999876543


No 72 
>PTZ00284 protein kinase; Provisional
Probab=99.97  E-value=4.8e-31  Score=314.42  Aligned_cols=107  Identities=23%  Similarity=0.391  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCC--------------CcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRS--------------VQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~--------------~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                      ..++.||+.||+|||+ .|||||||||+|||++..+.              ..+||+|||.+.....    ......||+
T Consensus       234 ~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~  309 (467)
T PTZ00284        234 AQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTR  309 (467)
T ss_pred             HHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc----ccccccCCc
Confidence            4456799999999998 59999999999999975321              2599999998754221    112345789


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      .|+|||++.+..|+.++|||||||++|+|++|++||.+.+..+...
T Consensus       310 ~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~  355 (467)
T PTZ00284        310 HYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH  355 (467)
T ss_pred             cccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            9999999999999999999999999999999999998876554433


No 73 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97  E-value=4.2e-31  Score=298.90  Aligned_cols=103  Identities=29%  Similarity=0.559  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  180 (324)
T cd05587         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA--EGHIKIADFGMCKENIFGGK-TTRTFCGTPDYIAPEIIAYQPYGK  180 (324)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC--CCCEEEeecCcceecCCCCC-ceeeecCCccccChhhhcCCCCCc
Confidence            345679999999999999999999999999985  45699999999864321111 122335779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++||||+||++|+|++|..||.+.+.
T Consensus       181 ~~DiwslGvil~elltG~~pf~~~~~  206 (324)
T cd05587         181 SVDWWAFGVLLYEMLAGQPPFDGEDE  206 (324)
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999976543


No 74 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97  E-value=4.4e-31  Score=300.25  Aligned_cols=102  Identities=24%  Similarity=0.444  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~--~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  174 (328)
T cd05593          98 RFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK--DGHIKITDFGLCKEGITDAA-TMKTFCGTPEYLAPEVLEDNDYGR  174 (328)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecccCHHHeEECC--CCcEEEecCcCCccCCCccc-ccccccCCcCccChhhhcCCCCCc
Confidence            345679999999999999999999999999985  45699999999865322111 112335789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       175 ~~DiwslGvil~elltG~~Pf~~~~  199 (328)
T cd05593         175 AVDWWGLGVVMYEMMCGRLPFYNQD  199 (328)
T ss_pred             cCCccccchHHHHHhhCCCCCCCCC
Confidence            9999999999999999999997654


No 75 
>KOG0600|consensus
Probab=99.97  E-value=1.1e-30  Score=302.49  Aligned_cols=112  Identities=24%  Similarity=0.406  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      ...+++||++||+|||++||+|||||..||||+.  .+.+||+|||+|+.....+........-|.+|+|||.+.+. .|
T Consensus       220 IKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn--~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Y  297 (560)
T KOG0600|consen  220 IKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDN--NGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSY  297 (560)
T ss_pred             HHHHHHHHHHHHHHHhhcCeeeccccccceEEcC--CCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCccc
Confidence            4556899999999999999999999999999986  56799999999997765554333334457899999999987 69


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      +..+|+||+||||.||+.|++.|.|.++.+....|
T Consensus       298 g~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI  332 (560)
T KOG0600|consen  298 GTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI  332 (560)
T ss_pred             ccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH
Confidence            99999999999999999999999999887765544


No 76 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97  E-value=4.7e-31  Score=303.74  Aligned_cols=159  Identities=23%  Similarity=0.346  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT------------------------- 1003 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~------------------------- 1003 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.......                         
T Consensus       104 ~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~--~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (363)
T cd05628         104 QFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS--KGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRK  181 (363)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCCEEEeeccCcccccccccccccccccccccccccccccccccc
Confidence            345679999999999999999999999999975  45799999999865421100                         


Q ss_pred             ---------ccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccc
Q psy5279        1004 ---------LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLF 1072 (1310)
Q Consensus      1004 ---------~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~ 1072 (1310)
                               ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...++....  ..++.. 
T Consensus       182 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-  260 (363)
T cd05628         182 AETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPE-  260 (363)
T ss_pred             cchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCc-
Confidence                     00112368899999999999999999999999999999999999999988887777765432  333321 


Q ss_pred             hhccHHHHHHHHHhccCCcc---hhcHHhhhCCCccccccc
Q psy5279        1073 KELTQEATRFLMLIFKHEVD---WITLANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1073 ~~lS~eakdLL~~il~~~~~---rit~~e~L~H~f~~~~~l 1110 (1310)
                      ..+++++++||.+++..+.+   |.++.+++.|+||...+.
T Consensus       261 ~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~~~  301 (363)
T cd05628         261 VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVDW  301 (363)
T ss_pred             CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCCCH
Confidence            24789999999987765443   568999999999876543


No 77 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97  E-value=7.9e-31  Score=296.91  Aligned_cols=102  Identities=29%  Similarity=0.536  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.+
T Consensus       100 ~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~--~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~  176 (320)
T cd05590         100 FYAAEITSALMFLHDKGIIYRDLKLDNVLLDH--EGHCKLADFGMCKEGIFNGK-TTSTFCGTPDYIAPEILQEMLYGPS  176 (320)
T ss_pred             HHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeeCCCCeecCcCCC-cccccccCccccCHHHHcCCCCCCc
Confidence            34679999999999999999999999999975  45699999999875322221 1223457899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      +|||||||++|+|++|..||.+.+.
T Consensus       177 ~DiwslG~il~el~~g~~Pf~~~~~  201 (320)
T cd05590         177 VDWWAMGVLLYEMLCGHAPFEAENE  201 (320)
T ss_pred             cchhhhHHHHHHHhhCCCCCCCCCH
Confidence            9999999999999999999987554


No 78 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97  E-value=1.5e-30  Score=295.53  Aligned_cols=102  Identities=25%  Similarity=0.423  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.|++.||.|||++ +|+||||||+|||++.  ++.+||+|||++......   ......|++.|+|||++.+..++.
T Consensus       107 ~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~  181 (331)
T cd06649         107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSV  181 (331)
T ss_pred             HHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC--CCcEEEccCccccccccc---ccccCCCCcCcCCHhHhcCCCCCc
Confidence            4467999999999986 6999999999999975  456999999998654321   112235779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|||||||++|+|++|..||...+..+
T Consensus       182 ~~DiwslG~il~el~tg~~p~~~~~~~~  209 (331)
T cd06649         182 QSDIWSMGLSLVELAIGRYPIPPPDAKE  209 (331)
T ss_pred             hHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999999999998765443


No 79 
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.97  E-value=2e-30  Score=294.86  Aligned_cols=103  Identities=23%  Similarity=0.483  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......    ....|++.|+|||++.+ ..+
T Consensus       120 ~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~  193 (343)
T cd07878         120 VQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCELRILDFGLARQADDEM----TGYVATRWYRAPEIMLNWMHY  193 (343)
T ss_pred             HHHHHHHHHHHHHHHHHCCeecccCChhhEEECC--CCCEEEcCCccceecCCCc----CCccccccccCchHhcCCccC
Confidence            3456789999999999999999999999999985  4579999999987653221    12356789999999977 468


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      +.++|||||||++|+|++|..||.+.+..+
T Consensus       194 ~~~~DiwslG~il~el~~g~~pf~~~~~~~  223 (343)
T cd07878         194 NQTVDIWSVGCIMAELLKGKALFPGNDYID  223 (343)
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCCCCHHH
Confidence            899999999999999999999998765433


No 80 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.97  E-value=5.2e-31  Score=299.26  Aligned_cols=156  Identities=25%  Similarity=0.425  Sum_probs=126.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC---------------------------
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG--------------------------- 1002 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g--------------------------- 1002 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++.......                           
T Consensus       105 ~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (350)
T cd05573         105 FYIAELVLALDSVHKLGFIHRDIKPDNILIDA--DGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQ  182 (350)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEeecCCCCccCcccCccccccccccccccccccccccccccc
Confidence            45679999999999999999999999999975  4579999999987554322                           


Q ss_pred             -cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcc--ccccccccchhccHHH
Q psy5279        1003 -TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYRFEYLFKELTQEA 1079 (1310)
Q Consensus      1003 -~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~--~~~~f~~~~~~lS~ea 1079 (1310)
                       ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+..  ....++.. ..+++++
T Consensus       183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~~~~~  261 (350)
T cd05573         183 RRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPD-PPVSPEA  261 (350)
T ss_pred             ccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCC-CCCCHHH
Confidence             0111233578999999999999999999999999999999999999999887776666554  23333332 2379999


Q ss_pred             HHHHHHhccCCcchhc-HHhhhCCCccccc
Q psy5279        1080 TRFLMLIFKHEVDWIT-LANNIDHEFWHVK 1108 (1310)
Q Consensus      1080 kdLL~~il~~~~~rit-~~e~L~H~f~~~~ 1108 (1310)
                      ++||.+|+.++.+|++ +.+++.|+||...
T Consensus       262 ~~li~~ll~dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         262 IDLICRLLCDPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             HHHHHHHccChhhcCCCHHHHhcCCCcCCC
Confidence            9999999998889999 9999999998753


No 81 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96  E-value=1.3e-30  Score=295.25  Aligned_cols=101  Identities=29%  Similarity=0.515  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+.. .....|++.|+|||++.+..++.+
T Consensus       104 ~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~  180 (323)
T cd05584         104 FYLSEISLALEHLHQQGIIYRDLKPENILLDA--QGHVKLTDFGLCKESIHEGTV-THTFCGTIEYMAPEILMRSGHGKA  180 (323)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEeeCcCCeecccCCCc-ccccCCCccccChhhccCCCCCCc
Confidence            44679999999999999999999999999975  457999999998754322221 223457899999999999899999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +|||||||++|+|++|..||.+.+
T Consensus       181 ~DiwslG~il~ell~G~~pf~~~~  204 (323)
T cd05584         181 VDWWSLGALMYDMLTGAPPFTAEN  204 (323)
T ss_pred             ceecccHHHHHHHhcCCCCCCCCC
Confidence            999999999999999999997654


No 82 
>KOG0201|consensus
Probab=99.96  E-value=2e-30  Score=296.87  Aligned_cols=204  Identities=27%  Similarity=0.399  Sum_probs=168.8

Q ss_pred             CCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecc--cCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCccc
Q psy5279         592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE--YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTAS  669 (1310)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  669 (1310)
                      .++.-.|.=+..|-||.||.|.||...- |.+.||.|++.  +..|....+.+|...|-++++++|...+.+|.-.    
T Consensus         9 ~~~~~~~~~~~~IgrGsfG~Vyk~~d~~-t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g----   83 (467)
T KOG0201|consen    9 IDPELLYTKLELIGRGSFGEVYKAIDNK-TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG----   83 (467)
T ss_pred             CCcccccccchhccccccceeeeeeecc-ccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec----
Confidence            3455667778999999999999999988 99999999975  5566778899999999999999999999999988    


Q ss_pred             chhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccc
Q psy5279         670 NIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKT  749 (1310)
Q Consensus       670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  749 (1310)
                      .-+-++||+|.|.-|+.-|..---..|                                                     
T Consensus        84 ~~LwiiMey~~gGsv~~lL~~~~~~~E-----------------------------------------------------  110 (467)
T KOG0201|consen   84 TKLWIIMEYCGGGSVLDLLKSGNILDE-----------------------------------------------------  110 (467)
T ss_pred             ccHHHHHHHhcCcchhhhhccCCCCcc-----------------------------------------------------
Confidence            457789999999987765432110000                                                     


Q ss_pred             ccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcc
Q psy5279         750 WEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAP  829 (1310)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  829 (1310)
                                                                                                      
T Consensus       111 --------------------------------------------------------------------------------  110 (467)
T KOG0201|consen  111 --------------------------------------------------------------------------------  110 (467)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCC
Q psy5279         830 VIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGD  909 (1310)
Q Consensus       830 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~  909 (1310)
                                                                                                      
T Consensus       111 --------------------------------------------------------------------------------  110 (467)
T KOG0201|consen  111 --------------------------------------------------------------------------------  110 (467)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEE
Q psy5279         910 KLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKL  989 (1310)
Q Consensus       910 ~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL  989 (1310)
                                                          +....++++++.||.|||.++.+|||||+.|||+...  +.|||
T Consensus       111 ------------------------------------~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~--g~vkl  152 (467)
T KOG0201|consen  111 ------------------------------------FEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES--GDVKL  152 (467)
T ss_pred             ------------------------------------ceeeeehHHHHHHhhhhhhcceecccccccceeEecc--CcEEE
Confidence                                                0112346789999999999999999999999999864  67999


Q ss_pred             EeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279         990 IDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus       990 ~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +|||++.+++..... ...+.|||+||||||+.+..|+.++||||||+++|||++|.+|+...
T Consensus       153 ~DfgVa~ql~~~~~r-r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~  214 (467)
T KOG0201|consen  153 ADFGVAGQLTNTVKR-RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL  214 (467)
T ss_pred             Eecceeeeeechhhc-cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc
Confidence            999999877644332 25567899999999999999999999999999999999999999643


No 83 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96  E-value=1.5e-30  Score=311.76  Aligned_cols=104  Identities=24%  Similarity=0.409  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||+|||++||+||||||+|||++.  ...+||+|||+++....... ......+||+.|+|||++.+..+
T Consensus       171 ~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~--~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  248 (478)
T PTZ00267        171 VGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP--TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRY  248 (478)
T ss_pred             HHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC--CCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCC
Confidence            3456789999999999999999999999999985  45799999999986543211 11223457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +.++|||||||++|+|++|..||.+.+
T Consensus       249 ~~~~Dv~slG~~l~el~tg~~Pf~~~~  275 (478)
T PTZ00267        249 SKKADMWSLGVILYELLTLHRPFKGPS  275 (478)
T ss_pred             CcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999999997654


No 84 
>KOG0198|consensus
Probab=99.96  E-value=4.3e-30  Score=292.00  Aligned_cols=232  Identities=25%  Similarity=0.401  Sum_probs=178.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC--eEEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD--SFTIIS  259 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~--~lyLVm  259 (1310)
                      ...+...+.||+|+||.||++.+..+|+.+|||.+........+.+.+|+.+|.+|+|||||++++......  .+++.|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            345778899999999999999999999999999987653333566899999999999999999999865555  699999


Q ss_pred             ecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC----
Q psy5279         260 ELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS----  334 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~----  334 (1310)
                      ||++||+|.+.+.+.+ .++|..++.|.+||++||.|||++|||||||||+|||++.. +..+||+|||+|+....    
T Consensus        96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG~a~~~~~~~~~  174 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFGLAKKLESKGTK  174 (313)
T ss_pred             eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCcccccccccccc
Confidence            9999999999998877 69999999999999999999999999999999999999863 23799999999998764    


Q ss_pred             CCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCCc-cCCCcce
Q psy5279         335 FGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNSC-YTHPSRM  411 (1310)
Q Consensus       335 ~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~c-l~hpw~~  411 (1310)
                      .....+..||+.|++     |+.-...                .......| | +||.+|++++...||.+- ....  .
T Consensus       175 ~~~~~~~~Gtp~~ma-----PEvi~~g----------------~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~--~  231 (313)
T KOG0198|consen  175 SDSELSVQGTPNYMA-----PEVIRNG----------------EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAE--A  231 (313)
T ss_pred             ccccccccCCccccC-----chhhcCC----------------CcCCccchhhhcCCEEEeccCCCCcchhhcchHH--H
Confidence            112334566666654     3332110                00112456 6 899999999998888774 1111  2


Q ss_pred             ecCCCCCCCCCCCCcceecccccccccc
Q psy5279         412 IYPPGTQFTPEPTPDKVLVSRDLRDVKT  439 (1310)
Q Consensus       412 ~~~~~~~~tp~~~p~~i~v~~~~rD~~~  439 (1310)
                      .+..+.....+++|..  ++.+.+||..
T Consensus       232 ~~~ig~~~~~P~ip~~--ls~~a~~Fl~  257 (313)
T KOG0198|consen  232 LLLIGREDSLPEIPDS--LSDEAKDFLR  257 (313)
T ss_pred             HHHHhccCCCCCCCcc--cCHHHHHHHH
Confidence            3334444433356666  6666666554


No 85 
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96  E-value=1e-30  Score=292.80  Aligned_cols=106  Identities=23%  Similarity=0.420  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ...+||+|||++........ ......+++.|+|||++.+ ..++
T Consensus       107 ~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  183 (309)
T cd07872         107 KIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLARAKSVPTK-TYSNEVVTLWYRPPDVLLGSSEYS  183 (309)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECccccceecCCCcc-ccccccccccccCCHHHhCCCCCC
Confidence            345679999999999999999999999999985  45699999999865432211 1122346789999999875 4578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|||||||++|+|++|.+||.+.+..+.
T Consensus       184 ~~~DiwslG~il~el~tg~~pf~~~~~~~~  213 (309)
T cd07872         184 TQIDMWGVGCIFFEMASGRPLFPGSTVEDE  213 (309)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            899999999999999999999988765443


No 86 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.96  E-value=4.9e-31  Score=298.50  Aligned_cols=102  Identities=25%  Similarity=0.485  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||+ +||+||||||+|||++.  ++.+||+|||+++........ .....|++.|+|||++.+..++
T Consensus        98 ~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05594          98 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK--DGHIKITDFGLCKEGIKDGAT-MKTFCGTPEYLAPEVLEDNDYG  174 (325)
T ss_pred             HHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC--CCCEEEecCCCCeecCCCCcc-cccccCCcccCCHHHHccCCCC
Confidence            3456799999999997 89999999999999975  457999999998653222211 1223578999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++|||||||++|+|++|..||.+.+
T Consensus       175 ~~~DiwslG~il~el~tG~~Pf~~~~  200 (325)
T cd05594         175 RAVDWWGLGVVMYEMMCGRLPFYNQD  200 (325)
T ss_pred             CccccccccceeeeeccCCCCCCCCC
Confidence            99999999999999999999997654


No 87 
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.96  E-value=6.8e-31  Score=297.62  Aligned_cols=157  Identities=24%  Similarity=0.433  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+. .++
T Consensus        99 ~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (330)
T cd05586          99 KFYIAELVLALEHLHKYDIVYRDLKPENILLDA--TGHIALCDFGLSKANLTDNK-TTNTFCGTTEYLAPEVLLDEKGYT  175 (330)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEecCCcCcCCCCCCC-CccCccCCccccCHHHHcCCCCCC
Confidence            345669999999999999999999999999985  45699999999864322111 11223466778888776432 234


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      .+                                                                              
T Consensus       176 ~~------------------------------------------------------------------------------  177 (330)
T cd05586         176 KH------------------------------------------------------------------------------  177 (330)
T ss_pred             Cc------------------------------------------------------------------------------
Confidence            44                                                                              


Q ss_pred             cccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhc
Q psy5279        1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1187 (1310)
Q Consensus      1108 ~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~ 1187 (1310)
                                                                       +||||+||++|+|++|..||.+.+..+.+.+
T Consensus       178 -------------------------------------------------~DvwslGvil~elltG~~Pf~~~~~~~~~~~  208 (330)
T cd05586         178 -------------------------------------------------VDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN  208 (330)
T ss_pred             -------------------------------------------------cceeccccEEEEeccCCCCCCCCCHHHHHHH
Confidence                                                             4555555555555555555555444444444


Q ss_pred             ccccccccccchhccCHHHHHHHHHhhhcCCCCCC----CHHHhhcCCccCCch
Q psy5279        1188 VNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRP----TVEECHENRWLVPSE 1237 (1310)
Q Consensus      1188 I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRp----Ta~e~L~HpWl~~~~ 1237 (1310)
                      +......++.  ..+|+++++||++||.+||.+||    +++|+|+||||...+
T Consensus       209 i~~~~~~~~~--~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~  260 (330)
T cd05586         209 IAFGKVRFPK--NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID  260 (330)
T ss_pred             HHcCCCCCCC--ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence            4444444432  34799999999999999999998    799999999997644


No 88 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96  E-value=8.7e-31  Score=290.51  Aligned_cols=101  Identities=24%  Similarity=0.467  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||+|||++||+||||||+|||++.  +..+||+|||++.........  ....|++.|+|||++.+..++.
T Consensus       105 ~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~  180 (285)
T cd05631         105 IFYAAELCCGLEDLQRERIVYRDLKPENILLDD--RGHIRISDLGLAVQIPEGETV--RGRVGTVGYMAPEVINNEKYTF  180 (285)
T ss_pred             HHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeCCCcEEcCCCCee--cCCCCCCCccCHhhhcCCCCCc
Confidence            456779999999999999999999999999975  456999999998765322211  2234679999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       181 ~~DvwslGvil~el~~g~~pf~~~~  205 (285)
T cd05631         181 SPDWWGLGCLIYEMIQGQSPFRKRK  205 (285)
T ss_pred             ccCchhHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999997653


No 89 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.96  E-value=2.3e-30  Score=292.61  Aligned_cols=103  Identities=28%  Similarity=0.522  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......|++.|+|||++.+..++.+
T Consensus       100 ~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~  176 (321)
T cd05591         100 FYAAEVTLALMFLHRHGVIYRDLKLDNILLDA--EGHCKLADFGMCKEGILNGV-TTTTFCGTPDYIAPEILQELEYGPS  176 (321)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEeecccceecccCCc-cccccccCccccCHHHHcCCCCCCc
Confidence            45679999999999999999999999999975  45799999999875322221 1223357899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      +|||||||++|+|++|..||.+.+..
T Consensus       177 ~DvwslG~il~el~tg~~Pf~~~~~~  202 (321)
T cd05591         177 VDWWALGVLMYEMMAGQPPFEADNED  202 (321)
T ss_pred             cceechhHHHHHHhcCCCCCCCCCHH
Confidence            99999999999999999999876543


No 90 
>KOG0604|consensus
Probab=99.96  E-value=1.1e-30  Score=286.89  Aligned_cols=231  Identities=23%  Similarity=0.364  Sum_probs=184.5

Q ss_pred             CccCCCeeee-ceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHh-cCCCCcceEEEEEEe----C
Q psy5279         179 KPITDAYDFG-DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ-LCHRNLVRLHDSYET----K  252 (1310)
Q Consensus       179 ~~~~d~Y~i~-~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~-L~HPNIVkL~d~f~~----~  252 (1310)
                      ..++++|.+. ++||-|-.|+|..|.++.||+.+|+|++..     ....+||+++.-. -.|||||+++++|+.    .
T Consensus        57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r  131 (400)
T KOG0604|consen   57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGR  131 (400)
T ss_pred             ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence            3577888876 579999999999999999999999998853     3346788887544 479999999999864    4


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCC--CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccc
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS  329 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~--lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLA  329 (1310)
                      ..+.+|||+|+||+||.++..++.  |+|.++..+++||+.|+.|||+.+|.||||||||+|....+ +..+||+|||+|
T Consensus       132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA  211 (400)
T KOG0604|consen  132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA  211 (400)
T ss_pred             eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence            578999999999999999987765  99999999999999999999999999999999999998654 567999999999


Q ss_pred             eeecCCCCCCCcccchHHHhhhcCCC-------------------------ccccCCCCCCCC---------CCCcchhh
Q psy5279         330 RRITSFGKLNPLEYDVRYVRQALRHP-------------------------WLNFADRKPTED---------TPKLNTDA  375 (1310)
Q Consensus       330 r~i~~~~~l~~~~~t~~yv~~~~r~P-------------------------~l~~~~~~~~~~---------~p~~~~~~  375 (1310)
                      |.-...+.+.+.|+||-||++..+.|                         |..-... +..+         .-.|....
T Consensus       212 K~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~-aispgMk~rI~~gqy~FP~pE  290 (400)
T KOG0604|consen  212 KETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-AISPGMKRRIRTGQYEFPEPE  290 (400)
T ss_pred             cccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc-cCChhHHhHhhccCccCCChh
Confidence            99888889999999999988654433                         3221110 0000         01223334


Q ss_pred             hhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCC
Q psy5279         376 LRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPP  415 (1310)
Q Consensus       376 ~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~  415 (1310)
                      ++.++..+||-+.+++--+.+.|+|+.+...|||++.+..
T Consensus       291 Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~  330 (400)
T KOG0604|consen  291 WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA  330 (400)
T ss_pred             HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence            4445556677777777777899999999999999977664


No 91 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.96  E-value=1.1e-30  Score=301.86  Aligned_cols=156  Identities=21%  Similarity=0.339  Sum_probs=121.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc------------c------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT------------L------------ 1004 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~------------~------------ 1004 (1310)
                      ..++.|++.||+|||++||+||||||+|||++.  ++.+||+|||+++.......            .            
T Consensus       104 ~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (377)
T cd05629         104 RFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR--GGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAV  181 (377)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEEeeccccccccccccccccccccccccccccccccccccc
Confidence            345679999999999999999999999999975  45799999999853211000            0            


Q ss_pred             ----------------------cccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc
Q psy5279        1005 ----------------------IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062 (1310)
Q Consensus      1005 ----------------------~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~ 1062 (1310)
                                            ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~  261 (377)
T cd05629         182 DSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKII  261 (377)
T ss_pred             ccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence                                  0001357899999999999999999999999999999999999999887766665554


Q ss_pred             ccc--ccccccchhccHHHHHHHHHhccCCcch---hcHHhhhCCCcccc
Q psy5279        1063 FVR--YRFEYLFKELTQEATRFLMLIFKHEVDW---ITLANNIDHEFWHV 1107 (1310)
Q Consensus      1063 ~~~--~~f~~~~~~lS~eakdLL~~il~~~~~r---it~~e~L~H~f~~~ 1107 (1310)
                      ...  ..++. ...++.++++||.+|+..+.+|   .++.+++.|+|+..
T Consensus       262 ~~~~~~~~p~-~~~~s~~~~dli~~lL~~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         262 NWRETLYFPD-DIHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             ccCCccCCCC-CCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhcCCCcCC
Confidence            322  22221 1247899999999999866654   59999999999864


No 92 
>KOG0661|consensus
Probab=99.96  E-value=9.5e-30  Score=293.04  Aligned_cols=111  Identities=23%  Similarity=0.396  Sum_probs=92.0

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-C
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-P 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ 1025 (1310)
                      ..+-++.||++||+|+|++|+.|||+||||||+..  ...|||+|||+|+.+........  ...|.+|+|||++... .
T Consensus       111 ~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDFGLARev~SkpPYTe--YVSTRWYRAPEvLLrs~~  186 (538)
T KOG0661|consen  111 DIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG--NDVIKIADFGLAREVRSKPPYTE--YVSTRWYRAPEVLLRSGY  186 (538)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--cceeEecccccccccccCCCcch--hhhcccccchHHhhhccc
Confidence            35667889999999999999999999999999985  45699999999987754332222  2346899999999765 5


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      |+.++|+||+|||++|+.+-++.|.|.++.+...+|
T Consensus       187 Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI  222 (538)
T KOG0661|consen  187 YSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI  222 (538)
T ss_pred             cCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH
Confidence            778999999999999999999999999876655444


No 93 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.96  E-value=2.4e-30  Score=292.59  Aligned_cols=103  Identities=30%  Similarity=0.568  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  180 (323)
T cd05616         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENMWDGV-TTKTFCGTPDYIAPEIIAYQPYGK  180 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC--CCcEEEccCCCceecCCCCC-ccccCCCChhhcCHHHhcCCCCCC
Confidence            345679999999999999999999999999986  45799999999875432221 122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|..||.+.+.
T Consensus       181 ~~DiwSlGvil~elltg~~Pf~~~~~  206 (323)
T cd05616         181 SVDWWAFGVLLYEMLAGQAPFEGEDE  206 (323)
T ss_pred             ccchhchhHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999977554


No 94 
>KOG0607|consensus
Probab=99.96  E-value=5.2e-30  Score=283.07  Aligned_cols=241  Identities=21%  Similarity=0.329  Sum_probs=194.7

Q ss_pred             eecccCccCCCeeee-ceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEe
Q psy5279         174 VKTRTKPITDAYDFG-DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYET  251 (1310)
Q Consensus       174 ~~~~~~~~~d~Y~i~-~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~  251 (1310)
                      .......|.+.|++. +.||+|+||.|--|+...||.+||||+|.+.....+..+.||++++.+. .|+||++|+++|++
T Consensus        68 ~ss~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd  147 (463)
T KOG0607|consen   68 TSSLSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED  147 (463)
T ss_pred             cccccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence            333445688889886 5699999999999999999999999999887666788899999999988 59999999999999


Q ss_pred             CCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC-CeEEEEeeccce
Q psy5279         252 KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLLLTDFGLSR  330 (1310)
Q Consensus       252 ~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~-~~VKLsDFGLAr  330 (1310)
                      +..+|||||-|.||.|+.++.++.+|+|.++..++++|+.||+|||.+||.||||||||||+.+.+. .-||||||.|+.
T Consensus       148 d~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS  227 (463)
T KOG0607|consen  148 DTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGS  227 (463)
T ss_pred             cceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999986542 369999999988


Q ss_pred             eecCCCC--------CCCcccchHHH------------------------------hhhcCCCccccCCCCCCCCC----
Q psy5279         331 RITSFGK--------LNPLEYDVRYV------------------------------RQALRHPWLNFADRKPTEDT----  368 (1310)
Q Consensus       331 ~i~~~~~--------l~~~~~t~~yv------------------------------~~~~r~P~l~~~~~~~~~~~----  368 (1310)
                      .+...+.        +.+.||+.+|+                              .+.+-.||.+.-+...-.+.    
T Consensus       228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C  307 (463)
T KOG0607|consen  228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC  307 (463)
T ss_pred             ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence            7654332        23345554443                              34444577554332221111    


Q ss_pred             ---------------CCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecC
Q psy5279         369 ---------------PKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYP  414 (1310)
Q Consensus       369 ---------------p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~  414 (1310)
                                     -+|....+..|.+.++|.++++++++...|+++.+.+.|||.....
T Consensus       308 r~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  308 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             HHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence                           2333455556677788989999999999999999999999975443


No 95 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.96  E-value=2.5e-30  Score=292.61  Aligned_cols=103  Identities=35%  Similarity=0.571  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~  180 (324)
T cd05589         104 VFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT--EGFVKIADFGLCKEGMGFGD-RTSTFCGTPEFLAPEVLTETSYTR  180 (324)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCcEEeCcccCCccCCCCCC-cccccccCccccCHhHhcCCCCCc
Confidence            445679999999999999999999999999986  45799999998865322211 122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|..||.+.+.
T Consensus       181 ~~DiwslG~il~el~~G~~pf~~~~~  206 (324)
T cd05589         181 AVDWWGLGVLIYEMLVGESPFPGDDE  206 (324)
T ss_pred             ccchhhHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999976543


No 96 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96  E-value=3.1e-30  Score=291.57  Aligned_cols=103  Identities=30%  Similarity=0.513  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++..... ........|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (316)
T cd05620          99 TFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR--DGHIKIADFGMCKENVFG-DNRASTFCGTPDYIAPEILQGLKYTF  175 (316)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEeCccCCCeecccC-CCceeccCCCcCccCHHHHcCCCCCc
Confidence            345679999999999999999999999999985  457999999998643211 11122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|..||.+.+.
T Consensus       176 ~~DiwslGvil~el~~g~~Pf~~~~~  201 (316)
T cd05620         176 SVDWWSFGVLLYEMLIGQSPFHGDDE  201 (316)
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999976543


No 97 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.96  E-value=1.6e-30  Score=301.54  Aligned_cols=157  Identities=22%  Similarity=0.396  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC---
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--- 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--- 1025 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++......+........||+.|+|||++.+..   
T Consensus       145 ~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~--~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~  222 (370)
T cd05621         145 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK--HGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDG  222 (370)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCC
Confidence            345679999999999999999999999999975  567999999999766433322223446789999999997643   


Q ss_pred             -CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCc---chhcHHhh
Q psy5279        1026 -IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEV---DWITLANN 1099 (1310)
Q Consensus      1026 -ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~---~rit~~e~ 1099 (1310)
                       ++.++|+||+||++|+|++|..||.+.+.......+....  ..++. ...+++.+++++..++..++   .|+++.++
T Consensus       223 ~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~  301 (370)
T cd05621         223 YYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEI  301 (370)
T ss_pred             CCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHH
Confidence             7789999999999999999999999988777766665433  23332 23579999999999987554   37799999


Q ss_pred             hCCCccccc
Q psy5279        1100 IDHEFWHVK 1108 (1310)
Q Consensus      1100 L~H~f~~~~ 1108 (1310)
                      +.|+|+...
T Consensus       302 l~hp~~~~~  310 (370)
T cd05621         302 KQHPFFKND  310 (370)
T ss_pred             hcCcccCCC
Confidence            999998653


No 98 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96  E-value=1e-30  Score=301.65  Aligned_cols=159  Identities=23%  Similarity=0.371  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC--------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-------------------------- 1002 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-------------------------- 1002 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++.......                          
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~--~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (376)
T cd05598         104 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEID  181 (376)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC--CCCEEEEeCCCCccccccccccccccccccccccccccccccccc
Confidence            345679999999999999999999999999975  4579999999874221000                          


Q ss_pred             ----------------cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccc
Q psy5279        1003 ----------------TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066 (1310)
Q Consensus      1003 ----------------~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~ 1066 (1310)
                                      ........||+.|||||++.+..++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~  261 (376)
T cd05598         182 RCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWET  261 (376)
T ss_pred             cccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCc
Confidence                            0000123578999999999999999999999999999999999999999887666555443222


Q ss_pred             cccc-cchhccHHHHHHHHHhccCCcchh---cHHhhhCCCcccccc
Q psy5279        1067 RFEY-LFKELTQEATRFLMLIFKHEVDWI---TLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1067 ~f~~-~~~~lS~eakdLL~~il~~~~~ri---t~~e~L~H~f~~~~~ 1109 (1310)
                      .+.. ....++++++++|.+|+.++.+|+   ++.+++.|+|+...+
T Consensus       262 ~~~~~~~~~~s~~~~~li~~l~~~p~~R~~~~t~~ell~h~~~~~~~  308 (376)
T cd05598         262 TLHIPSQAKLSREASDLILRLCCGAEDRLGKNGADEIKAHPFFKGID  308 (376)
T ss_pred             cccCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhCCCCcCCCC
Confidence            2221 124689999999999888888999   899999999987543


No 99 
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.96  E-value=4.7e-30  Score=290.93  Aligned_cols=103  Identities=31%  Similarity=0.581  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......||+.|+|||++.+..++.
T Consensus       104 ~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~--~~~ikL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  180 (323)
T cd05615         104 VFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMVDGV-TTRTFCGTPDYIAPEIIAYQPYGK  180 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEeccccccccCCCCc-cccCccCCccccCHHHHcCCCCCC
Confidence            345679999999999999999999999999986  45699999999865332221 122335789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|+||+||++|+|++|.+||.+.+.
T Consensus       181 ~~DiwslGvil~elltG~~pf~~~~~  206 (323)
T cd05615         181 SVDWWAYGVLLYEMLAGQPPFDGEDE  206 (323)
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999987543


No 100
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.96  E-value=3e-30  Score=287.52  Aligned_cols=105  Identities=23%  Similarity=0.428  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........ ......+++.|+|||++.+. .++
T Consensus       107 ~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~  183 (301)
T cd07873         107 KLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLARAKSIPTK-TYSNEVVTLWYRPPDILLGSTDYS  183 (301)
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECC--CCcEEECcCcchhccCCCCC-cccccceeecccCcHHHhCCCCCc
Confidence            345679999999999999999999999999985  45699999999865432111 11223456899999998764 577


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++|||||||++|+|++|.+||.+.+..+
T Consensus       184 ~~~Dv~slG~~l~el~tg~~~f~~~~~~~  212 (301)
T cd07873         184 TQIDMWGVGCIFYEMSTGRPLFPGSTVEE  212 (301)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            89999999999999999999998765443


No 101
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96  E-value=1.6e-30  Score=300.91  Aligned_cols=159  Identities=24%  Similarity=0.383  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC--------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-------------------------- 1002 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-------------------------- 1002 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++.......                          
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~--~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (382)
T cd05625         104 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPA  181 (382)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEEeECCCCccccccccccccccccccccccccccccccccc
Confidence            445679999999999999999999999999975  5679999999874321000                          


Q ss_pred             --------------------cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc
Q psy5279        1003 --------------------TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062 (1310)
Q Consensus      1003 --------------------~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~ 1062 (1310)
                                          ........||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..+....+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~  261 (382)
T cd05625         182 NCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVI  261 (382)
T ss_pred             cccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                                000012357899999999999999999999999999999999999999887766655544


Q ss_pred             cccccccc-cchhccHHHHHHHHHhccCCcchhc---HHhhhCCCcccccc
Q psy5279        1063 FVRYRFEY-LFKELTQEATRFLMLIFKHEVDWIT---LANNIDHEFWHVKD 1109 (1310)
Q Consensus      1063 ~~~~~f~~-~~~~lS~eakdLL~~il~~~~~rit---~~e~L~H~f~~~~~ 1109 (1310)
                      .....+.. ....++++++++|.+|+.++.+|++   +.+++.|+|+...+
T Consensus       262 ~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~  312 (382)
T cd05625         262 NWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTID  312 (382)
T ss_pred             ccCCCcCCCCcccCCHHHHHHHHHHccCHhHcCCCCCHHHHhcCCCcCCcC
Confidence            32222211 2346799999999998888888887   89999999986533


No 102
>KOG0658|consensus
Probab=99.96  E-value=6.9e-30  Score=288.09  Aligned_cols=107  Identities=29%  Similarity=0.492  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..+..||.+||.|||+.||+||||||.|+|++.. .+.+||||||.|+.+.......+.+  .|.+|+|||.+.+. .|
T Consensus       127 iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~-tg~LKicDFGSAK~L~~~epniSYi--cSRyYRaPELifga~~Y  203 (364)
T KOG0658|consen  127 IKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPD-TGVLKICDFGSAKVLVKGEPNISYI--CSRYYRAPELIFGATEY  203 (364)
T ss_pred             eHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCC-CCeEEeccCCcceeeccCCCceeEE--EeccccCHHHHcCcccc
Confidence            35567899999999999999999999999999863 4789999999999876543332222  35899999999876 68


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +.+.||||.||++.||+-|++-|.|++....
T Consensus       204 t~~IDiWSaGCV~aELl~g~plFpG~s~~dQ  234 (364)
T KOG0658|consen  204 TTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ  234 (364)
T ss_pred             CceeEEhhhhHHHHHHhcCCcccCCCCHHHH
Confidence            9999999999999999999999999876554


No 103
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96  E-value=2.6e-30  Score=292.43  Aligned_cols=103  Identities=26%  Similarity=0.483  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++...... .......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~lH~~givH~dikp~NIll~~--~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~  175 (323)
T cd05575          99 RFYAAEIASALGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEGIEHS-KTTSTFCGTPEYLAPEVLRKQPYDR  175 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeccCCCcccccCC-CccccccCChhhcChhhhcCCCCCc
Confidence            345679999999999999999999999999975  4579999999986432211 1122335789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|..||.+.+.
T Consensus       176 ~~DvwslG~il~ell~g~~pf~~~~~  201 (323)
T cd05575         176 TVDWWCLGAVLYEMLYGLPPFYSRDT  201 (323)
T ss_pred             cccccccchhhhhhhcCCCCCCCCCH
Confidence            99999999999999999999976543


No 104
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=7.2e-30  Score=297.66  Aligned_cols=104  Identities=24%  Similarity=0.389  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++|||||||||+|||++.  ...+||+|||+++....... .......||+.|+|||++.+..|+
T Consensus       188 ~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~--~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  265 (392)
T PHA03207        188 ITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE--PENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYC  265 (392)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCC
Confidence            445779999999999999999999999999985  45699999999876543221 112234578999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      .++|||||||++|+|++|..||.+...
T Consensus       266 ~~~DvwslGvil~el~~g~~pf~~~~~  292 (392)
T PHA03207        266 AKTDIWSAGLVLFEMSVKNVTLFGKQV  292 (392)
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCCC
Confidence            999999999999999999999987643


No 105
>KOG0667|consensus
Probab=99.96  E-value=8.4e-30  Score=303.62  Aligned_cols=110  Identities=24%  Similarity=0.427  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .+-+.+||+.||.+||+.||||+|||||||||.......|||+|||.|+.....-.    ....+..|+|||++.+.+|+
T Consensus       291 ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy----tYiQSRfYRAPEVILGlpY~  366 (586)
T KOG0667|consen  291 VRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY----TYIQSRFYRAPEVILGLPYD  366 (586)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce----eeeeccccccchhhccCCCC
Confidence            34567899999999999999999999999999876667899999999986543211    22356899999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      .+.||||||||++||++|.+.|.|+++.+....|
T Consensus       367 ~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I  400 (586)
T KOG0667|consen  367 TAIDMWSLGCILAELFTGEPLFPGDNEYDQLARI  400 (586)
T ss_pred             CccceeehhhhHHhHhcCccccCCCCHHHHHHHH
Confidence            9999999999999999999999999987765544


No 106
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.96  E-value=9.8e-30  Score=291.41  Aligned_cols=90  Identities=19%  Similarity=0.270  Sum_probs=70.7

Q ss_pred             cccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc--hhhhhhHHhhhhhhhchhhHHHHHHhcCCCC
Q psy5279         589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD--TLHQVNTEFDNLRSLRHERIASLLEAYKPST  666 (1310)
Q Consensus       589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  666 (1310)
                      ....+..+.|+++..|.+|.||.|.+|..+. +++.||.|++.-.++  ...++..|+..|+.|+|++|..+++.|... 
T Consensus        67 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-  144 (353)
T PLN00034         67 PSAAKSLSELERVNRIGSGAGGTVYKVIHRP-TGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN-  144 (353)
T ss_pred             CCCCCCHHHHhhhhhccCCCCeEEEEEEECC-CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC-
Confidence            3444456789999999999999999986654 788999999865443  345678999999999999999988877554 


Q ss_pred             cccchhhHHHHhhcCch
Q psy5279         667 TASNIAVLVMEKLQGAD  683 (1310)
Q Consensus       667 ~~~~~~~~~~~~~~~~~  683 (1310)
                         +...+|||+|.|.+
T Consensus       145 ---~~~~lv~e~~~~~~  158 (353)
T PLN00034        145 ---GEIQVLLEFMDGGS  158 (353)
T ss_pred             ---CeEEEEEecCCCCc
Confidence               44567888887764


No 107
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.96  E-value=5.2e-30  Score=290.05  Aligned_cols=101  Identities=30%  Similarity=0.539  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++...... .......|++.|+|||++.+..++.++
T Consensus       101 ~~~qi~~al~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~  177 (316)
T cd05619         101 YAAEIICGLQFLHSKGIVYRDLKLDNILLDT--DGHIKIADFGMCKENMLGD-AKTCTFCGTPDYIAPEILLGQKYNTSV  177 (316)
T ss_pred             HHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEccCCcceECCCCC-CceeeecCCccccCHHHHcCCCCCchh
Confidence            4569999999999999999999999999986  4569999999986532111 111223577999999999999999999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |+||+||++|+|++|..||.+.+.
T Consensus       178 DvwslG~il~el~~G~~pf~~~~~  201 (316)
T cd05619         178 DWWSFGVLLYEMLIGQSPFHGHDE  201 (316)
T ss_pred             hhhhHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999976543


No 108
>KOG0597|consensus
Probab=99.96  E-value=5.7e-30  Score=297.70  Aligned_cols=164  Identities=26%  Similarity=0.423  Sum_probs=149.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|.+.+.||+|+||.||||+.+.|.+.||||.+.+...  +..+.+.+|++|++.|+|||||.++++|++...+++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            468888999999999999999999999999999976543  445568999999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~  339 (1310)
                      ||.| +|+..+...+.++|..++.+..|+..||.|||+++|+|||+||.|||+...  +++|+|||||||.++... .++
T Consensus        82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~--~~~KlcdFg~Ar~m~~~t~vlt  158 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKG--GTLKLCDFGLARAMSTNTSVLT  158 (808)
T ss_pred             hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCC--CceeechhhhhhhcccCceeee
Confidence            9998 999999999999999999999999999999999999999999999999754  489999999999886544 556


Q ss_pred             CcccchHHHh
Q psy5279         340 PLEYDVRYVR  349 (1310)
Q Consensus       340 ~~~~t~~yv~  349 (1310)
                      ...|||-|++
T Consensus       159 sikGtPlYmA  168 (808)
T KOG0597|consen  159 SIKGTPLYMA  168 (808)
T ss_pred             eccCcccccC
Confidence            6788888886


No 109
>KOG0591|consensus
Probab=99.96  E-value=1.5e-29  Score=276.35  Aligned_cols=141  Identities=20%  Similarity=0.282  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHHHHHH--CC--ceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC
Q psy5279         950 YCVTSVLDGLQYLHW--RG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs--~g--IVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      -++.|++.||..||+  .+  |+||||||.||+++.  ++.|||+|||+++.+....+. .....|||+||+||++.+.+
T Consensus       128 k~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~--~gvvKLGDfGL~r~l~s~~tf-A~S~VGTPyYMSPE~i~~~~  204 (375)
T KOG0591|consen  128 KYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA--NGVVKLGDFGLGRFLSSKTTF-AHSLVGTPYYMSPERIHESG  204 (375)
T ss_pred             HHHHHHHHHHHHHhccccccceeeccCcchheEEcC--CCceeeccchhHhHhcchhHH-HHhhcCCCcccCHHHHhcCC
Confidence            356799999999999  55  999999999999986  567999999999877644333 33457899999999999999


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccc-hhccHHHHHHHHHhccCCcc-hhc
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KELTQEATRFLMLIFKHEVD-WIT 1095 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~-~~lS~eakdLL~~il~~~~~-rit 1095 (1310)
                      |+.++||||+||++|||..-.+||.|++..++.++|..+.+  +..+ ..-|.+...++..|+..+++ |++
T Consensus       205 Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~--~~~p~~~YS~~l~~li~~ci~vd~~~RP~  274 (375)
T KOG0591|consen  205 YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY--PPLPDEHYSTDLRELINMCIAVDPEQRPD  274 (375)
T ss_pred             CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC--CCCcHHHhhhHHHHHHHHHccCCcccCCC
Confidence            99999999999999999999999999999999999987754  3333 45688889999988876554 444


No 110
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96  E-value=3.4e-30  Score=298.72  Aligned_cols=157  Identities=22%  Similarity=0.324  Sum_probs=119.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC--------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-------------------------- 1002 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-------------------------- 1002 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||+++......                          
T Consensus       104 ~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~--~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (381)
T cd05626         104 RFYIAELTLAIESVHKMGFIHRDIKPDNILIDL--DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVS  181 (381)
T ss_pred             HHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC--CCCEEEeeCcCCcccccccccccccccccccccccCccccccccc
Confidence            445679999999999999999999999999975  4579999999875321000                          


Q ss_pred             --------------------cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc
Q psy5279        1003 --------------------TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062 (1310)
Q Consensus      1003 --------------------~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~ 1062 (1310)
                                          ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~  261 (381)
T cd05626         182 NCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVI  261 (381)
T ss_pred             ccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHH
Confidence                                000012357899999999999999999999999999999999999999887666554443


Q ss_pred             ccc--ccccccchhccHHHHHHHHHhccCCc---chhcHHhhhCCCccccc
Q psy5279        1063 FVR--YRFEYLFKELTQEATRFLMLIFKHEV---DWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1063 ~~~--~~f~~~~~~lS~eakdLL~~il~~~~---~rit~~e~L~H~f~~~~ 1108 (1310)
                      ...  ..++. ...+++++++||.+|+..++   .|.++.+++.|+||...
T Consensus       262 ~~~~~~~~~~-~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         262 NWENTLHIPP-QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             ccccccCCCC-CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            221  22221 23578999999998765332   48899999999998643


No 111
>KOG0658|consensus
Probab=99.96  E-value=6.4e-30  Score=288.33  Aligned_cols=171  Identities=26%  Similarity=0.356  Sum_probs=142.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----eEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----SFT  256 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----~ly  256 (1310)
                      .-.|.-.+.+|+|+||.||+|...++++.||||.+....    +.-.+|+.||+.++|||||+|..+|....     .+.
T Consensus        23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln   98 (364)
T KOG0658|consen   23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN   98 (364)
T ss_pred             EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence            345677899999999999999999999999999885432    22347999999999999999998886432     345


Q ss_pred             EEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         257 IISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||||||+. +|.+.+..    +..++..+++.|++||++||.|||+.||+||||||+|||+|.+. +.+||||||-||++
T Consensus        99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t-g~LKicDFGSAK~L  176 (364)
T KOG0658|consen   99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT-GVLKICDFGSAKVL  176 (364)
T ss_pred             HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC-CeEEeccCCcceee
Confidence            89999986 67666653    45699999999999999999999999999999999999999764 58999999999999


Q ss_pred             cCCCCCCCcccchHHHhhhcCCCccccCCCC
Q psy5279         333 TSFGKLNPLEYDVRYVRQALRHPWLNFADRK  363 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~  363 (1310)
                      ...+...+..     +++.||+|++.|+..+
T Consensus       177 ~~~epniSYi-----cSRyYRaPELifga~~  202 (364)
T KOG0658|consen  177 VKGEPNISYI-----CSRYYRAPELIFGATE  202 (364)
T ss_pred             ccCCCceeEE-----EeccccCHHHHcCccc
Confidence            7765543322     6789999999998444


No 112
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96  E-value=8e-30  Score=288.24  Aligned_cols=101  Identities=31%  Similarity=0.539  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++...... .......||+.|+|||++.+..++.++
T Consensus       101 ~~~qi~~al~~LH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~  177 (316)
T cd05592         101 YAAEIICGLQFLHKKGIIYRDLKLDNVLLDK--DGHIKIADFGMCKENMNGE-GKASTFCGTPDYIAPEILKGQKYNESV  177 (316)
T ss_pred             HHHHHHHHHHHHHHCCEEeCCCCHHHeEECC--CCCEEEccCcCCeECCCCC-CccccccCCccccCHHHHcCCCCCCcc
Confidence            4569999999999999999999999999975  4579999999987543221 122234578999999999999999999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |||||||++|+|++|..||.+.+.
T Consensus       178 DvwslG~il~ell~G~~Pf~~~~~  201 (316)
T cd05592         178 DWWSFGVLLYEMLIGQSPFHGEDE  201 (316)
T ss_pred             cchhHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999987643


No 113
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96  E-value=2.4e-30  Score=291.65  Aligned_cols=100  Identities=26%  Similarity=0.465  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......|++.|+|||++.+..++.
T Consensus       101 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~  177 (318)
T cd05582         101 KFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQ  177 (318)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC--CCcEEEeeccCCcccCCCCC-ceecccCChhhcCHHHHcCCCCCC
Confidence            344669999999999999999999999999975  45699999998865432211 111234567777777766655666


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|||||||++|+|++|..||.+
T Consensus       178 ~~DiwslG~il~el~tg~~p~~~  200 (318)
T cd05582         178 SADWWSFGVLMFEMLTGSLPFQG  200 (318)
T ss_pred             ccceeccceEeeeeccCCCCCCC
Confidence            66666666666666666666643


No 114
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96  E-value=4.5e-30  Score=297.44  Aligned_cols=156  Identities=23%  Similarity=0.387  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC----C
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE----P 1025 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~----~ 1025 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......+........||+.|+|||++.+.    .
T Consensus       146 ~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  223 (370)
T cd05596         146 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGY  223 (370)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC--CCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCC
Confidence            34569999999999999999999999999975  56799999999876543332222344678999999998754    3


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcc---hhcHHhhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVD---WITLANNI 1100 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~---rit~~e~L 1100 (1310)
                      ++.++|+|||||++|+|++|.+||.+.+.......+....  ..++. ...+|.++++||..||..+++   |+++.+++
T Consensus       224 ~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell  302 (370)
T cd05596         224 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIK  302 (370)
T ss_pred             CCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHh
Confidence            7789999999999999999999999988877777665433  23332 235799999999999976554   78999999


Q ss_pred             CCCccccc
Q psy5279        1101 DHEFWHVK 1108 (1310)
Q Consensus      1101 ~H~f~~~~ 1108 (1310)
                      .|+|+...
T Consensus       303 ~h~~~~~~  310 (370)
T cd05596         303 SHPFFKND  310 (370)
T ss_pred             cCcccCCC
Confidence            99998754


No 115
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96  E-value=5.7e-30  Score=291.01  Aligned_cols=100  Identities=28%  Similarity=0.489  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  .+.+||+|||+++.....+. ......||+.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (329)
T cd05588          99 RFYSAEISLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGIRPGD-TTSTFCGTPNYIAPEILRGEDYGF  175 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEECcCccccccccCCC-ccccccCCccccCHHHHcCCCCCC
Confidence            345679999999999999999999999999975  45799999999864322111 112335789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|+|||||++|+|++|..||..
T Consensus       176 ~~DiwslG~~l~el~~g~~Pf~~  198 (329)
T cd05588         176 SVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             ccceechHHHHHHHHHCCCCccc
Confidence            99999999999999999999953


No 116
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.96  E-value=3.6e-30  Score=292.09  Aligned_cols=153  Identities=24%  Similarity=0.434  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  .+.+||+|||++.....    ......|++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~  177 (333)
T cd05600         104 RFYMAEMFEAVDALHELGYIHRDLKPENFLIDA--SGHIKLTDFGLSKGIVT----YANSVVGSPDYMAPEVLRGKGYDF  177 (333)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEEEeCcCCccccc----ccCCcccCccccChhHhcCCCCCC
Confidence            345679999999999999999999999999975  45799999999875432    112335779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccccc--cccc---chhccHHHHHHHHHhccCCc-chhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR--FEYL---FKELTQEATRFLMLIFKHEV-DWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~--f~~~---~~~lS~eakdLL~~il~~~~-~rit~~e~L~H 1102 (1310)
                      ++|||||||++|+|++|..||.+.+..+....+......  .+..   ...+++++.+||.+|+..++ +|.++.+++.|
T Consensus       178 ~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         178 TVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             ccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            999999999999999999999998877766555432211  1211   12568999999999887654 56799999999


Q ss_pred             Ccccc
Q psy5279        1103 EFWHV 1107 (1310)
Q Consensus      1103 ~f~~~ 1107 (1310)
                      +|+..
T Consensus       258 ~~~~~  262 (333)
T cd05600         258 PFFKE  262 (333)
T ss_pred             cccCC
Confidence            99874


No 117
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96  E-value=2.3e-30  Score=292.87  Aligned_cols=157  Identities=23%  Similarity=0.424  Sum_probs=125.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc------C
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA------E 1023 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~------~ 1023 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  .+.+||+|||++...............|++.|+|||++.      .
T Consensus       106 ~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  183 (330)
T cd05601         106 FYLAELVLAIHSVHQMGYVHRDIKPENVLIDR--TGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGK  183 (330)
T ss_pred             HHHHHHHHHHHHHHHCCeEcccCchHheEECC--CCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhcccccccc
Confidence            34679999999999999999999999999985  457999999999766443332223345789999999987      4


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcchhcHHhhhC
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVDWITLANNID 1101 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~ 1101 (1310)
                      ..++.++|||||||++|+|++|..||.+.+......++....  ..++. ...+++++++||..|+.++.+|+++.+++.
T Consensus       184 ~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~li~~ll~~p~~R~t~~~l~~  262 (330)
T cd05601         184 GTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPE-DPKVSSDFLDLIQSLLCGQKERLGYEGLCC  262 (330)
T ss_pred             CCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHccChhhCCCHHHHhC
Confidence            567889999999999999999999999887766666554322  12222 235789999999999998889999999999


Q ss_pred             CCcccccc
Q psy5279        1102 HEFWHVKD 1109 (1310)
Q Consensus      1102 H~f~~~~~ 1109 (1310)
                      |+|+...+
T Consensus       263 h~~~~~~~  270 (330)
T cd05601         263 HPFFSKID  270 (330)
T ss_pred             CCCcCCCC
Confidence            99987533


No 118
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.96  E-value=6.6e-30  Score=290.68  Aligned_cols=158  Identities=25%  Similarity=0.437  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-----
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE----- 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~----- 1023 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++...............|++.|||||++..     
T Consensus       105 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (331)
T cd05597         105 RFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK--NGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGK  182 (331)
T ss_pred             HHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC--CCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccc
Confidence            345679999999999999999999999999975  4579999999987654333322233457899999999973     


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcc---hhcHHh
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVD---WITLAN 1098 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~---rit~~e 1098 (1310)
                      ..++.++|||||||++|+|++|..||.+.+..+....+....  +.++.....+++++++|+.+|+..+.+   |.++.+
T Consensus       183 ~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~  262 (331)
T cd05597         183 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQD  262 (331)
T ss_pred             cCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence            457789999999999999999999999887776665554322  334444456899999999988865443   679999


Q ss_pred             hhCCCccccc
Q psy5279        1099 NIDHEFWHVK 1108 (1310)
Q Consensus      1099 ~L~H~f~~~~ 1108 (1310)
                      ++.|+||...
T Consensus       263 ~l~hp~~~~~  272 (331)
T cd05597         263 FKDHPFFEGI  272 (331)
T ss_pred             HhcCCCCCCC
Confidence            9999998653


No 119
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96  E-value=2.3e-29  Score=286.74  Aligned_cols=100  Identities=23%  Similarity=0.416  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||++ +|+||||||+|||++.  .+.+||+|||++......   ......|++.|+|||++.+..++.
T Consensus       107 ~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~  181 (333)
T cd06650         107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSV  181 (333)
T ss_pred             HHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC--CCCEEEeeCCcchhhhhh---ccccCCCCccccCHHHhcCCCCCc
Confidence            3456899999999985 7999999999999975  456999999998654321   112235678999999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|+|||||++|+|++|..||.....
T Consensus       182 ~~DvwslG~il~~l~~g~~p~~~~~~  207 (333)
T cd06650         182 QSDIWSMGLSLVEMAIGRYPIPPPDA  207 (333)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcch
Confidence            99999999999999999999976544


No 120
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.96  E-value=2.8e-30  Score=296.61  Aligned_cols=158  Identities=23%  Similarity=0.398  Sum_probs=124.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT------------------------- 1003 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~------------------------- 1003 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++........                         
T Consensus       104 ~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~--~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (360)
T cd05627         104 QFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA--KGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRK  181 (360)
T ss_pred             HHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCEEEeeccCCcccccccccccccccccCCcccccccccccccc
Confidence            445679999999999999999999999999975  56799999999864321100                         


Q ss_pred             ---------ccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccc
Q psy5279        1004 ---------LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLF 1072 (1310)
Q Consensus      1004 ---------~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~ 1072 (1310)
                               .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+....  ..++.. 
T Consensus       182 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-  260 (360)
T cd05627         182 AETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPE-  260 (360)
T ss_pred             cccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCC-
Confidence                     00112357899999999999999999999999999999999999999988877766665422  223321 


Q ss_pred             hhccHHHHHHHHHhccCCcchh---cHHhhhCCCcccccc
Q psy5279        1073 KELTQEATRFLMLIFKHEVDWI---TLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1073 ~~lS~eakdLL~~il~~~~~ri---t~~e~L~H~f~~~~~ 1109 (1310)
                      ..+++++++||.+++.++.+|+   ++.+++.|+||...+
T Consensus       261 ~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~  300 (360)
T cd05627         261 VPISEKAKDLILRFCTDSENRIGSNGVEEIKSHPFFEGVD  300 (360)
T ss_pred             CCCCHHHHHHHHHhccChhhcCCCCCHHHHhcCCCCCCCC
Confidence            2478999999998887777777   478999999987644


No 121
>KOG0586|consensus
Probab=99.96  E-value=5e-29  Score=294.72  Aligned_cols=232  Identities=23%  Similarity=0.302  Sum_probs=187.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .....|.+.+.||+|.||+|.+|++..||..||||+|.+...  ..+..+.+|+++|+.|+|||||+|+.+++++..+|+
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            455789999999999999999999999999999999987543  234558899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||+.||++++++.+.+.+.|.+++.++.|+..|++|||+++|||||||++||||+.+  +.|||+|||++..+.....
T Consensus       133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~--mnikIaDfgfS~~~~~~~~  210 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDEN--MNIKIADFGFSTFFDYGLM  210 (596)
T ss_pred             EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccc--cceeeeccccceeeccccc
Confidence            99999999999999999999999999999999999999999999999999999999754  4799999999999998889


Q ss_pred             CCCcccchHHHhhh------cCCCccccC-----------CCCCCC--CCCCcchhhhhhhcc-------cchhhchhhh
Q psy5279         338 LNPLEYDVRYVRQA------LRHPWLNFA-----------DRKPTE--DTPKLNTDALRNYYN-------LYKDWYGNAA  391 (1310)
Q Consensus       338 l~~~~~t~~yv~~~------~r~P~l~~~-----------~~~~~~--~~p~~~~~~~~~~~~-------~~~D~~~~~~  391 (1310)
                      +.+.||++.|+++.      |-.|++..-           ...|..  ..+.+....++.-|.       ..++.+.+.+
T Consensus       211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~l  290 (596)
T KOG0586|consen  211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFL  290 (596)
T ss_pred             ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHhh
Confidence            99999999998753      222321111           111111  122333333332221       1245555566


Q ss_pred             hhhcccCCCCCCccCCCcceec
Q psy5279         392 VRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       392 l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                      +....+|.|.++.-.|.|+...
T Consensus       291 vl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  291 VLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             ccCccccCCHHHhhhhcccchh
Confidence            7778899999999999998543


No 122
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.96  E-value=5.2e-30  Score=290.14  Aligned_cols=103  Identities=25%  Similarity=0.493  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~--~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (325)
T cd05602          99 RFYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNG-TTSTFCGTPEYLAPEVLHKQPYDR  175 (325)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEEccCCCCcccccCCC-CcccccCCccccCHHHHcCCCCCC
Confidence            345679999999999999999999999999975  45799999999865322111 122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|.+||.+.+.
T Consensus       176 ~~DiwslG~il~el~~g~~pf~~~~~  201 (325)
T cd05602         176 TVDWWCLGAVLYEMLYGLPPFYSRNT  201 (325)
T ss_pred             ccccccccHHHHHHhcCCCCCCCCCH
Confidence            99999999999999999999976543


No 123
>KOG0662|consensus
Probab=99.96  E-value=1.1e-29  Score=262.76  Aligned_cols=206  Identities=26%  Similarity=0.408  Sum_probs=167.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      +.|...++||+|.||+||+|+.+.|++.||+|.++..  .........|||.+|+.|.|.|||+|+++...+..+.||+|
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe   81 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence            4577788999999999999999999999999998754  33556778899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         261 LAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ||.. +|..+... .+.+....++.+|.|++.||.|||+++++||||||+|+||+.+|  .+|++||||||...-    .
T Consensus        82 ~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng--elkladfglarafgi----p  154 (292)
T KOG0662|consen   82 FCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG--ELKLADFGLARAFGI----P  154 (292)
T ss_pred             HhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC--cEEecccchhhhcCC----c
Confidence            9975 44433332 35588899999999999999999999999999999999998766  899999999997743    2


Q ss_pred             CcccchHHHhhhcCCCccccCCCC----------------------CCCCCCCcchhhhhhhcccc----hh-hchhhhh
Q psy5279         340 PLEYDVRYVRQALRHPWLNFADRK----------------------PTEDTPKLNTDALRNYYNLY----KD-WYGNAAV  392 (1310)
Q Consensus       340 ~~~~t~~yv~~~~r~P~l~~~~~~----------------------~~~~~p~~~~~~~~~~~~~~----~D-~~~~~~l  392 (1310)
                      .-|++.+.|++|||.|-+.|+...                      |+++ +.--.+|+..||..+    +| |++...+
T Consensus       155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp-g~dvddqlkrif~~lg~p~ed~wps~t~l  233 (292)
T KOG0662|consen  155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP-GNDVDDQLKRIFRLLGTPTEDQWPSMTKL  233 (292)
T ss_pred             eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC-CCcHHHHHHHHHHHhCCCccccCCccccC
Confidence            348899999999999998888432                      3332 222346777776544    44 7777766


Q ss_pred             hhcc
Q psy5279         393 RRYY  396 (1310)
Q Consensus       393 ~~~~  396 (1310)
                      +++.
T Consensus       234 pdyk  237 (292)
T KOG0662|consen  234 PDYK  237 (292)
T ss_pred             CCCc
Confidence            6643


No 124
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96  E-value=1.1e-29  Score=287.05  Aligned_cols=102  Identities=33%  Similarity=0.622  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~  175 (318)
T cd05570          99 RFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDS--EGHIKIADFGMCKEGILGGV-TTSTFCGTPDYIAPEILSYQPYGP  175 (318)
T ss_pred             HHHHHHHHHHHHHHHhCCeEccCCCHHHeEECC--CCcEEecccCCCeecCcCCC-cccceecCccccCHHHhcCCCCCc
Confidence            345679999999999999999999999999986  45799999999864321111 112234679999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||.+.+
T Consensus       176 ~~DiwslGvil~~l~~G~~pf~~~~  200 (318)
T cd05570         176 AVDWWALGVLLYEMLAGQSPFEGDD  200 (318)
T ss_pred             chhhhhHHHHHHHHhhCCCCCCCCC
Confidence            9999999999999999999997654


No 125
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.96  E-value=9.6e-30  Score=289.15  Aligned_cols=159  Identities=22%  Similarity=0.428  Sum_probs=127.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc-----C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA-----E 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~-----~ 1023 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||++......+........||+.|+|||++.     .
T Consensus       105 ~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~--~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (332)
T cd05623         105 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM--NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGK  182 (332)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCC
Confidence            445679999999999999999999999999975  457999999998765433333333456789999999986     3


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcc---hhcHHh
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVD---WITLAN 1098 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~---rit~~e 1098 (1310)
                      ..++.++|||||||++|+|++|..||.+.+..+....+....  ..++.....+++++++|+.+|+..+++   |.++.+
T Consensus       183 ~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~  262 (332)
T cd05623         183 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIED  262 (332)
T ss_pred             CCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHH
Confidence            457889999999999999999999999988877777665443  334444567899999999998876554   467899


Q ss_pred             hhCCCcccccc
Q psy5279        1099 NIDHEFWHVKD 1109 (1310)
Q Consensus      1099 ~L~H~f~~~~~ 1109 (1310)
                      ++.|+|+...+
T Consensus       263 ~~~h~~f~~~~  273 (332)
T cd05623         263 FKQHPFFTGID  273 (332)
T ss_pred             HhCCCCcCCCC
Confidence            99999987544


No 126
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96  E-value=2.8e-29  Score=275.78  Aligned_cols=100  Identities=21%  Similarity=0.338  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  +..+||+|||+++....... ......+++.|+|||++.+. .++
T Consensus       102 ~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  178 (284)
T cd07839         102 KSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINK--NGELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYS  178 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcC--CCcEEECccchhhccCCCCC-CcCCCccccCCcChHHHhCCcccC
Confidence            345679999999999999999999999999985  45699999999875432211 11223456889999998765 478


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|||||||++|+|++|..||..
T Consensus       179 ~~~DiwslG~il~~l~tg~~p~~~  202 (284)
T cd07839         179 TSIDMWSAGCIFAELANAGRPLFP  202 (284)
T ss_pred             cHHHHHHHHHHHHHHHhcCCCCcC
Confidence            899999999999999998888643


No 127
>KOG0611|consensus
Probab=99.96  E-value=1.3e-29  Score=285.30  Aligned_cols=250  Identities=22%  Similarity=0.424  Sum_probs=213.1

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccC----cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS----HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      ..|.|..-+-.|.||-|-+|.|.. .+..||.|.+.-+    ..++..+..|.+.+.+|.|++|.++.|.|...    .-
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~-sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk----dK  127 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHK-SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK----DK  127 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhcc-CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC----ce
Confidence            469999999999999999999977 8999999998643    34566788999999999999999999999877    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccccc
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWE  751 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  751 (1310)
                      .|+||||..|.|+..|+|.|...+|.+                                                     
T Consensus       128 IvivMEYaS~GeLYDYiSer~~LsErE-----------------------------------------------------  154 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDYISERGSLSERE-----------------------------------------------------  154 (668)
T ss_pred             EEEEEEecCCccHHHHHHHhccccHHH-----------------------------------------------------
Confidence            799999999999999988877665532                                                     


Q ss_pred             CCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchh
Q psy5279         752 DNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVI  831 (1310)
Q Consensus       752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  831 (1310)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (668)
T KOG0611|consen  155 --------------------------------------------------------------------------------  154 (668)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEE
Q psy5279         832 RERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKL  911 (1310)
Q Consensus       832 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l  911 (1310)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (668)
T KOG0611|consen  155 --------------------------------------------------------------------------------  154 (668)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEe
Q psy5279         912 EMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID  991 (1310)
Q Consensus       912 ~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~D  991 (1310)
                                                          ++.+|+||++|+.|||+++++|||||.+|||++.  ++.+||+|
T Consensus       155 ------------------------------------aRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~--N~NiKIAD  196 (668)
T KOG0611|consen  155 ------------------------------------ARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ--NNNIKIAD  196 (668)
T ss_pred             ------------------------------------HHHHHHHHHHHHHHHhhccceecccchhheeecC--CCCeeeec
Confidence                                                3445789999999999999999999999999986  45699999


Q ss_pred             eccceeeccCCcccccCCCCCCcccccccccCCCCC-CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccc
Q psy5279         992 LGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070 (1310)
Q Consensus       992 FGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys-~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~ 1070 (1310)
                      ||++-......-.  ..++|+|.|.+||++.+.+|. +.+|.|||||+||.|..|..||.|.+...+..+|..+.|+-|.
T Consensus       197 FGLSNly~~~kfL--qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~  274 (668)
T KOG0611|consen  197 FGLSNLYADKKFL--QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE  274 (668)
T ss_pred             cchhhhhccccHH--HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC
Confidence            9998766543333  345678999999999999996 7799999999999999999999999999999999999887764


Q ss_pred             cchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1071 LFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1071 ~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                          -+.+|.-||+.||..+++|+...+.+..+||..
T Consensus       275 ----~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  275 ----TPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             ----CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence                356788999998887777766666677789865


No 128
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.96  E-value=5.9e-29  Score=282.69  Aligned_cols=165  Identities=24%  Similarity=0.433  Sum_probs=146.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.|++.+.||+|+||.||+|.++.+|+.||+|++....   ....+.+.+|+.+|+.++|||||++++++..++.+|+|
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            467999999999999999999999999999999997532   22345678999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||+.||+|.+.+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.....  .
T Consensus        97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~--~  172 (329)
T PTZ00263         97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG--HVKVTDFGFAKKVPDR--T  172 (329)
T ss_pred             EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC--CEEEeeccCceEcCCC--c
Confidence            99999999999998888899999999999999999999999999999999999998665  7999999999977543  2


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      .+.++|+.|+++
T Consensus       173 ~~~~gt~~y~aP  184 (329)
T PTZ00263        173 FTLCGTPEYLAP  184 (329)
T ss_pred             ceecCChhhcCH
Confidence            345677777654


No 129
>KOG0594|consensus
Probab=99.96  E-value=1.2e-29  Score=285.96  Aligned_cols=107  Identities=26%  Similarity=0.410  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      ...+++||+.||+|||++||+||||||+|||++.  .+.+||+|||+|+...-.... .....+|..|+|||++.+. .|
T Consensus       122 ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~--~G~lKlaDFGlAra~~ip~~~-yt~evvTlWYRaPEvLlGs~~Y  198 (323)
T KOG0594|consen  122 IKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS--SGVLKLADFGLARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSY  198 (323)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccCCcceEEECC--CCcEeeeccchHHHhcCCccc-ccccEEEeeccCHHHhcCCCcC
Confidence            4566889999999999999999999999999987  677999999999855422111 1122346789999999988 68


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +..+||||+|||++||+++++-|.|.++.+.
T Consensus       199 s~~vDiWs~GcIfaEm~~~~~LFpG~se~~q  229 (323)
T KOG0594|consen  199 STSVDIWSLGCIFAEMFTRRPLFPGDSEIDQ  229 (323)
T ss_pred             CCCcchHhHHHHHHHHHhCCCCCCCCcHHHH
Confidence            9999999999999999999999999887443


No 130
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96  E-value=5.9e-30  Score=289.72  Aligned_cols=102  Identities=25%  Similarity=0.468  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++...... .......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~--~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~  175 (325)
T cd05604          99 RFYAAEIASALGYLHSINIVYRDLKPENILLDS--QGHVVLTDFGLCKEGIAQS-DTTTTFCGTPEYLAPEVIRKQPYDN  175 (325)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEeecCCcccCCCCC-CCcccccCChhhCCHHHHcCCCCCC
Confidence            345679999999999999999999999999986  4579999999986432111 1122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       176 ~~DvwslG~il~el~~G~~pf~~~~  200 (325)
T cd05604         176 TVDWWCLGAVLYEMLYGLPPFYCRD  200 (325)
T ss_pred             cCccccccceehhhhcCCCCCCCCC
Confidence            9999999999999999999997654


No 131
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.96  E-value=6.9e-30  Score=290.54  Aligned_cols=159  Identities=23%  Similarity=0.433  Sum_probs=126.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-----
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE----- 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~----- 1023 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++...............|++.|+|||++.+     
T Consensus       105 ~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (331)
T cd05624         105 RFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM--NGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGM  182 (331)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC--CCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCC
Confidence            345679999999999999999999999999975  4569999999987664433322333467899999999876     


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcch---hcHHh
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVDW---ITLAN 1098 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~r---it~~e 1098 (1310)
                      ..++.++|+|||||++|+|++|..||.+.+..+....+....  ..++.....++.++++++.+|+..+++|   .++.+
T Consensus       183 ~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~  262 (331)
T cd05624         183 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIED  262 (331)
T ss_pred             CCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHH
Confidence            457889999999999999999999999888777766665433  3344445668999999999988765554   57899


Q ss_pred             hhCCCcccccc
Q psy5279        1099 NIDHEFWHVKD 1109 (1310)
Q Consensus      1099 ~L~H~f~~~~~ 1109 (1310)
                      .+.|+||...+
T Consensus       263 ~~~h~~f~~~~  273 (331)
T cd05624         263 FKKHAFFEGID  273 (331)
T ss_pred             HhcCCCcCCCC
Confidence            99999987543


No 132
>KOG4717|consensus
Probab=99.96  E-value=3.2e-29  Score=288.13  Aligned_cols=230  Identities=23%  Similarity=0.326  Sum_probs=190.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~--~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+..-|.+.+.||+|.|++|.+|++.-||..||||+|.+.+..  ....+.+|+..|+-++|||||+||++..+...+||
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL   94 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL   94 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence            5677899999999999999999999999999999999876543  34457789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |+|+-.||+|++++.++. .+.|.-++.|++||+.|+.|||...+|||||||||+.+-..- +.|||+|||++..+.+..
T Consensus        95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl-GlVKLTDFGFSNkf~PG~  173 (864)
T KOG4717|consen   95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL-GLVKLTDFGFSNKFQPGK  173 (864)
T ss_pred             EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec-CceEeeeccccccCCCcc
Confidence            999999999999998764 599999999999999999999999999999999999987654 479999999999999999


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCCCCCCC----------------CCCc----chhhhhhh-----------cccchh
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADRKPTED----------------TPKL----NTDALRNY-----------YNLYKD  385 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~----------------~p~~----~~~~~~~~-----------~~~~~D  385 (1310)
                      .+++.||...|-     +|+++++|.+....                .|+|    +-+.+-.|           ....+|
T Consensus       174 kL~TsCGSLAYS-----APEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrd  248 (864)
T KOG4717|consen  174 KLTTSCGSLAYS-----APEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRD  248 (864)
T ss_pred             hhhcccchhhcc-----CchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHH
Confidence            999999986654     46666665542211                1112    11112111           123367


Q ss_pred             hchhhhhhhcccCCCCCCccCCCcceecCC
Q psy5279         386 WYGNAAVRRYYRRRPLNSCYTHPSRMIYPP  415 (1310)
Q Consensus       386 ~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~  415 (1310)
                      .+..-++++..+|-++.++..|+|+...-+
T Consensus       249 LI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  249 LIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             HHHHHHhcCchhhccHHHHhccccccCCCC
Confidence            777778899999999999999999855443


No 133
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96  E-value=1.8e-29  Score=279.35  Aligned_cols=102  Identities=25%  Similarity=0.463  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      +..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........ ......|++.|+|||++.+..++
T Consensus        99 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~  175 (280)
T cd05608          99 ACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDGQS-KTKGYAGTPGFMAPELLQGEEYD  175 (280)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCccceecCCCCc-cccccCCCcCccCHHHhcCCCCC
Confidence            3456789999999999999999999999999975  45699999999876543221 12233577999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|+|||||++|+|++|..||...
T Consensus       176 ~~~DvwslG~il~el~~g~~pf~~~  200 (280)
T cd05608         176 FSVDYFALGVTLYEMIAARGPFRAR  200 (280)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999999754


No 134
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=1.9e-29  Score=301.70  Aligned_cols=101  Identities=25%  Similarity=0.407  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++|||||||||+|||++.  ...+||+|||+++....... .......||+.|+|||++.+..++
T Consensus       263 ~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~  340 (461)
T PHA03211        263 TAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG--PEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYT  340 (461)
T ss_pred             HHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC--CCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCC
Confidence            446789999999999999999999999999975  45699999999876532211 112234578999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|||||||++|+|++|..|+.+
T Consensus       341 ~~sDvwSlGviL~El~~g~~~lf~  364 (461)
T PHA03211        341 PSVDIWSAGLVIFEAAVHTASLFS  364 (461)
T ss_pred             chHHHHHHHHHHHHHHHcCCCccc
Confidence            999999999999999998876543


No 135
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96  E-value=1.8e-29  Score=287.30  Aligned_cols=99  Identities=30%  Similarity=0.519  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus        99 ~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~--~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (329)
T cd05618          99 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGF  175 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCCEEEeeCCccccccCCCC-ccccccCCccccCHHHHcCCCCCC
Confidence            345679999999999999999999999999975  45799999999865322111 112345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      ++|+|||||++|+|++|..||.
T Consensus       176 ~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         176 SVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             ccceecccHHHHHHhhCCCCCc
Confidence            9999999999999999999995


No 136
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.96  E-value=2.7e-28  Score=280.89  Aligned_cols=149  Identities=26%  Similarity=0.467  Sum_probs=136.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||+||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||+++++.+.+.+.+||||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            46899999999999999999999999999999997532   123345788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||+||+|.+.+.+.+.+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~--~vkL~DFGla~~~~  152 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG--HVKLSDFGLCTGLK  152 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--CEEEeeccCccccc
Confidence            9999999999998888899999999999999999999999999999999999998655  79999999998654


No 137
>KOG0610|consensus
Probab=99.96  E-value=1.4e-28  Score=280.20  Aligned_cols=267  Identities=19%  Similarity=0.273  Sum_probs=168.4

Q ss_pred             hHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccc---cccCCCchhHHHHHHH
Q psy5279         878 HVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYL---PIVIPTTHKDAYCVTS  954 (1310)
Q Consensus       878 ~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L---~~~i~~~~~~~~i~~Q  954 (1310)
                      .++.|.-|.+.-  .+||+--..-.++-.+-..+.|++|++|+             +..+.   +.....+..+++++..
T Consensus       123 Ra~tE~eIL~~l--DHPFlPTLYa~fet~~~~cl~meyCpGGd-------------L~~LrqkQp~~~fse~~aRFYaAE  187 (459)
T KOG0610|consen  123 RAQTEREILSLL--DHPFLPTLYASFETDKYSCLVMEYCPGGD-------------LHSLRQKQPGKRFSESAARFYAAE  187 (459)
T ss_pred             HHHHHHHHHHhc--CCCccchhhheeeccceeEEEEecCCCcc-------------HHHHHhhCCCCccchhhHHHHHHH
Confidence            344555555543  36777666555554444445566655554             33333   2334567789999999


Q ss_pred             HHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhH
Q psy5279         955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWS 1034 (1310)
Q Consensus       955 Il~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWS 1034 (1310)
                      |+.||+|||-.|||+||||||||||..  +++|-|+||-++.......+....        .+|+.-..   .+++    
T Consensus       188 vl~ALEYLHmlGivYRDLKPENILvre--dGHIMLsDFDLS~~~~~~Pt~~~s--------~~~~~~~~---~~~~----  250 (459)
T KOG0610|consen  188 VLLALEYLHMLGIVYRDLKPENILVRE--DGHIMLSDFDLSLRCPVSPTLVKS--------SSPRSSGS---QPSC----  250 (459)
T ss_pred             HHHHHHHHHhhceeeccCCcceeEEec--CCcEEeeeccccccCCCCCeeecc--------CCCCCCCC---Cccc----
Confidence            999999999999999999999999975  678999999988643111110000        01110000   0000    


Q ss_pred             HHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccccccccc
Q psy5279        1035 AGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRET 1114 (1310)
Q Consensus      1035 LGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~ 1114 (1310)
                         +.    ..-..|...                                 ++.....+..      +..-....+..  
T Consensus       251 ---~~----~~~s~f~~r---------------------------------~~~~~~~~~k------~~~~~~~~~p~--  282 (459)
T KOG0610|consen  251 ---RS----RQPSCFSPR---------------------------------CLSSSKKRKK------KDESASRSLPE--  282 (459)
T ss_pred             ---cc----ccccccccc---------------------------------hhcccccccc------ccccccccchh--
Confidence               00    000001000                                 0000000000      00000000000  


Q ss_pred             ccccccccccccCCcccCCCcccccc-cccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhccccccc
Q psy5279        1115 NYTFRLSAKNVIGWSEKGIPSALFKT-KEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1193 (1310)
Q Consensus      1115 ~~~~rlsa~~~i~~s~~~ips~lf~~-~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~ 1193 (1310)
                                .+.-+...--.++..+ ..-||||+.+++++.+||||++||++||||.|..||.|.+..+|+.||.....
T Consensus       283 ----------~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l  352 (459)
T KOG0610|consen  283 ----------LVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL  352 (459)
T ss_pred             ----------hhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC
Confidence                      0000000000111222 34799999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhccCHHHHHHHHHhhhcCCCCCCC----HHHhhcCCccCC
Q psy5279        1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPT----VEECHENRWLVP 1235 (1310)
Q Consensus      1194 ~f~~~~~~iS~eAkdfI~~lL~~dP~kRpT----a~e~L~HpWl~~ 1235 (1310)
                      .||... .+|.+|||||++||++||++|+.    |+|+.+||||..
T Consensus       353 ~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~g  397 (459)
T KOG0610|consen  353 KFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEG  397 (459)
T ss_pred             cCCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccC
Confidence            998644 89999999999999999999998    999999999943


No 138
>KOG0690|consensus
Probab=99.96  E-value=4.4e-30  Score=283.63  Aligned_cols=243  Identities=25%  Similarity=0.362  Sum_probs=190.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHH---HHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~---~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      -.+.|+.+++||+|.||+|-+|+.+.||+.||||++++.-.-.++.   ...|-.+|+..+||.+..|...|++.+.+++
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence            3477899999999999999999999999999999997653333332   4568899999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~  336 (1310)
                      ||||+.||+|+.++.+...|+|..+++|-.+|..||.|||+++||.||||.+|+|++.+|  +|||+||||.|.-.. ..
T Consensus       246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG--HIKitDFGLCKE~I~~g~  323 (516)
T KOG0690|consen  246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG--HIKITDFGLCKEEIKYGD  323 (516)
T ss_pred             EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC--ceEeeecccchhcccccc
Confidence            999999999999999988899999999999999999999999999999999999999877  999999999996443 44


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCC
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPG  416 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~  416 (1310)
                      .++++||||+|++     |+++       +          .+.|..+.||||.             .+.....+++--|+
T Consensus       324 t~kTFCGTPEYLA-----PEVl-------e----------DnDYgraVDWWG~-------------GVVMYEMmCGRLPF  368 (516)
T KOG0690|consen  324 TTKTFCGTPEYLA-----PEVL-------E----------DNDYGRAVDWWGV-------------GVVMYEMMCGRLPF  368 (516)
T ss_pred             eeccccCChhhcC-----chhh-------c----------cccccceeehhhh-------------hHHHHHHHhccCcc
Confidence            6789999999986     4443       1          1347888999888             34445555555566


Q ss_pred             CCCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCCCCc
Q psy5279         417 TQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPGG  465 (1310)
Q Consensus       417 ~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~~  465 (1310)
                      .+...+...+-| +-.+.|    ++-.+...++.+...+ ..+|..+-||
T Consensus       369 yn~dh~kLFeLI-l~ed~k----FPr~ls~eAktLLsGLL~kdP~kRLGg  413 (516)
T KOG0690|consen  369 YNKDHEKLFELI-LMEDLK----FPRTLSPEAKTLLSGLLKKDPKKRLGG  413 (516)
T ss_pred             cccchhHHHHHH-Hhhhcc----CCccCCHHHHHHHHHHhhcChHhhcCC
Confidence            666655444443 333334    4444555555554444 4455554444


No 139
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96  E-value=2.5e-28  Score=283.15  Aligned_cols=147  Identities=27%  Similarity=0.427  Sum_probs=134.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||+||+|.++.+++.||+|++.+..   ......+.+|+.+|+.++|||||+++++|.+.+.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5889999999999999999999999999999997542   2234567899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||+||+|.+.+.+...+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+++..
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~--~~kL~DFGl~~~~  151 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG--HIKLTDFGLCTGF  151 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC--CEEEeeCcCCccc
Confidence            999999999998877899999999999999999999999999999999999998655  8999999998643


No 140
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96  E-value=3e-29  Score=302.46  Aligned_cols=104  Identities=27%  Similarity=0.424  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccC-CcccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL-GTLIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~-g~~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      +..++.|++.||+|||++||+||||||+|||++.  +..+||+|||+++..... .........||+.|+|||++.+..+
T Consensus       145 ~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~--~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~  222 (496)
T PTZ00283        145 AGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS--NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPY  222 (496)
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC--CCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCC
Confidence            4556789999999999999999999999999986  457999999998765321 1111223457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +.++|||||||++|+|++|..||.+.+
T Consensus       223 s~k~DVwSlGvilyeLltG~~Pf~~~~  249 (496)
T PTZ00283        223 SKKADMFSLGVLLYELLTLKRPFDGEN  249 (496)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            999999999999999999999997654


No 141
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.96  E-value=4.7e-29  Score=277.83  Aligned_cols=164  Identities=24%  Similarity=0.383  Sum_probs=143.3

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||.||+|.++.+|+.||+|++....   ......+.+|+.+|+.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            46899999999999999999999999999999996532   123456789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ||++||+|.+.+...+.+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.....  ..
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~--~~kl~Dfg~~~~~~~~--~~  156 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--HIKLTDFGFAKKLRDR--TW  156 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEEecCcchhccCC--cc
Confidence            9999999999998878899999999999999999999999999999999999998655  7999999999876432  22


Q ss_pred             CcccchHHHhh
Q psy5279         340 PLEYDVRYVRQ  350 (1310)
Q Consensus       340 ~~~~t~~yv~~  350 (1310)
                      ..++|+.|+++
T Consensus       157 ~~~gt~~y~aP  167 (291)
T cd05612         157 TLCGTPEYLAP  167 (291)
T ss_pred             cccCChhhcCH
Confidence            34566666543


No 142
>KOG0586|consensus
Probab=99.96  E-value=1e-29  Score=300.47  Aligned_cols=154  Identities=24%  Similarity=0.467  Sum_probs=130.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      +.++.|+++|++|||+++|||||||.+||||+.  +..+||+|||++..+.......+  .+|+|.|.|||++.+..|  
T Consensus       158 r~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~--~mnikIaDfgfS~~~~~~~~lqt--~cgsppyAaPEl~~g~~y--  231 (596)
T KOG0586|consen  158 RAKFRQIVSAVEYCHSKNIVHRDLKAENILLDE--NMNIKIADFGFSTFFDYGLMLQT--FCGSPPYAAPELFNGKKY--  231 (596)
T ss_pred             hhhhHHHHHHHHHHhhcceeccccchhhccccc--ccceeeeccccceeecccccccc--cCCCCCccChHhhcCccc--
Confidence            445779999999999999999999999999985  45699999999987764444333  456688998888655422  


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                                                                                                      
T Consensus       232 --------------------------------------------------------------------------------  231 (596)
T KOG0586|consen  232 --------------------------------------------------------------------------------  231 (596)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcc
Q psy5279        1109 DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1188 (1310)
Q Consensus      1109 ~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I 1188 (1310)
                                                                  .++++|+||+||++|.|++|..||.|.+..+....+
T Consensus       232 --------------------------------------------~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv  267 (596)
T KOG0586|consen  232 --------------------------------------------DGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV  267 (596)
T ss_pred             --------------------------------------------CCcceehhhhhhhheeeeecccccCCcccccccchh
Confidence                                                        245688999999999999999999999988888889


Q ss_pred             cccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1189 NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1189 ~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      ..+++..|.   .||.+++++|+++|.++|++|+|++|+++|.|+..
T Consensus       268 l~gk~rIp~---~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~  311 (596)
T KOG0586|consen  268 LRGKYRIPF---YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND  311 (596)
T ss_pred             eeeeecccc---eeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence            999998873   69999999999999999999999999999999843


No 143
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96  E-value=2.6e-29  Score=272.33  Aligned_cols=92  Identities=29%  Similarity=0.444  Sum_probs=77.5

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCC--ccc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPST--TAS  669 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~  669 (1310)
                      .+++.|+++..|.+|.||.|.+|..+. ++..++.|.+........++..|++.++++ .|++|..+++.+....  .-.
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKK-TGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECC-CCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            578999999999999999999887654 678999999999888888899999999999 6999999999876543  334


Q ss_pred             chhhHHHHhhcCchhh
Q psy5279         670 NIAVLVMEKLQGADVL  685 (1310)
Q Consensus       670 ~~~~~~~~~~~~~~~~  685 (1310)
                      ....+|||++.|..+.
T Consensus        82 ~~~~lv~e~~~~~~L~   97 (275)
T cd06608          82 DQLWLVMELCGGGSVT   97 (275)
T ss_pred             eEEEEEEEcCCCCcHH
Confidence            5677999999886543


No 144
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.96  E-value=1.5e-29  Score=293.41  Aligned_cols=157  Identities=24%  Similarity=0.403  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC----
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP---- 1025 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~---- 1025 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++......+........||+.|||||++.+..    
T Consensus       146 ~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~--~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~  223 (371)
T cd05622         146 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY  223 (371)
T ss_pred             HHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC--CCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCcc
Confidence            45679999999999999999999999999975  567999999999766433332223445789999999997643    


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccc--cccccchhccHHHHHHHHHhccCCcc---hhcHHhhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY--RFEYLFKELTQEATRFLMLIFKHEVD---WITLANNI 1100 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~--~f~~~~~~lS~eakdLL~~il~~~~~---rit~~e~L 1100 (1310)
                      ++.++|||||||++|+|++|.+||.+.+.......+.....  .++. ...++.+++++|..|+.+++.   |.++.+++
T Consensus       224 ~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~  302 (371)
T cd05622         224 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-DNDISKEAKNLICAFLTDREVRLGRNGVEEIK  302 (371)
T ss_pred             CCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCC-cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHh
Confidence            77899999999999999999999999888777777654332  2332 246899999999999975544   67899999


Q ss_pred             CCCcccccc
Q psy5279        1101 DHEFWHVKD 1109 (1310)
Q Consensus      1101 ~H~f~~~~~ 1109 (1310)
                      .|+|+....
T Consensus       303 ~h~~~~~~~  311 (371)
T cd05622         303 RHLFFKNDQ  311 (371)
T ss_pred             cCcccCCCC
Confidence            999886533


No 145
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=2.4e-29  Score=289.60  Aligned_cols=97  Identities=29%  Similarity=0.428  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++|||||||||+|||++.  ...+||+|||+++......  ......|++.|+|||++.+..++.
T Consensus       160 ~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~  235 (357)
T PHA03209        160 LIIEKQILEGLRYLHAQRIIHRDVKTENIFIND--VDQVCIGDLGAAQFPVVAP--AFLGLAGTVETNAPEVLARDKYNS  235 (357)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEecCccccccccCc--ccccccccccccCCeecCCCCCCc
Confidence            345679999999999999999999999999975  4569999999986432211  112235779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                      ++|||||||++|+|+++..|+
T Consensus       236 ~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        236 KADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             hhhHHHHHHHHHHHHHcCCcc
Confidence            999999999999999855444


No 146
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96  E-value=1.6e-29  Score=285.39  Aligned_cols=102  Identities=27%  Similarity=0.486  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++...... .......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~  175 (321)
T cd05603          99 RFYAAEVASAIGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEGVEPE-ETTSTFCGTPEYLAPEVLRKEPYDR  175 (321)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEccCCCCccCCCCC-CccccccCCcccCCHHHhcCCCCCC
Confidence            345679999999999999999999999999976  4579999999986432111 1122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       176 ~~DiwslG~il~el~~g~~pf~~~~  200 (321)
T cd05603         176 TVDWWCLGAVLYEMLYGLPPFYSRD  200 (321)
T ss_pred             cCcccccchhhhhhhcCCCCCCCCC
Confidence            9999999999999999999997654


No 147
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=3.1e-29  Score=302.53  Aligned_cols=100  Identities=22%  Similarity=0.280  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+++.+............|++.|+|||++.+..|+.
T Consensus       270 ~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  347 (501)
T PHA03210        270 RAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC--DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCE  347 (501)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCc
Confidence            346789999999999999999999999999975  457999999999766433222222345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      ++|||||||++|+|++|..|+.
T Consensus       348 ~~DiwSlGvil~ell~~~~~p~  369 (501)
T PHA03210        348 ITDIWSCGLILLDMLSHDFCPI  369 (501)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCc
Confidence            9999999999999999876543


No 148
>KOG0663|consensus
Probab=99.96  E-value=3e-29  Score=279.07  Aligned_cols=183  Identities=21%  Similarity=0.288  Sum_probs=134.1

Q ss_pred             cccccchhhhhhhcc-cCCCchhhHhHHHHHhhhcCCC-CCceeecceeeeeeeCCEEEEEEeccCCCc----ceeeecc
Q psy5279         856 YGAADTYTLRRLRHE-IGTRPEAHVEADALIESRRDGH-APFFREKPITIPVVIGDKLEMKCLAVGEPK----PVIQWFK  929 (1310)
Q Consensus       856 ~~~~~~~~~~~l~~e-~~~~~~~~~~a~~~ie~~~~~~-~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~----~vi~~f~  929 (1310)
                      .+-.+++|+|++|=+ .+                 ++. +.-+||+.+...+.|.+++..+-+-+|...    .||++.+
T Consensus        98 k~t~eIVALKr~kmekek-----------------~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E  160 (419)
T KOG0663|consen   98 KKTDEIVALKRLKMEKEK-----------------EGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE  160 (419)
T ss_pred             CCcceeEEeeeccccccc-----------------CCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH
Confidence            345678999999832 11                 111 244677777777778888877776666543    3444433


Q ss_pred             cCCccccccccc--CCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccccc
Q psy5279         930 LGTSTLCYLPIV--IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP 1007 (1310)
Q Consensus       930 ~g~~l~~~L~~~--i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~ 1007 (1310)
                        .++..+|...  -..+..+..++.|++.||+|||.+.|+||||||+|+|+..  .+.+||+|||+|+.++..-...++
T Consensus       161 --hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~--~G~lKiaDFGLAR~ygsp~k~~T~  236 (419)
T KOG0663|consen  161 --HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSH--KGILKIADFGLAREYGSPLKPYTP  236 (419)
T ss_pred             --hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeecc--CCcEEecccchhhhhcCCcccCcc
Confidence              3334444322  1245567888999999999999999999999999999985  567999999999877543322222


Q ss_pred             CCCCCCcccccccccCC-CCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhh
Q psy5279        1008 INTPNPEFAAPEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060 (1310)
Q Consensus      1008 ~~tGtp~Y~APEvl~~~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~ 1060 (1310)
                      . .-|.+|+|||.+.+. .|+.++|+||+|||+.|||++.+-|.|.++.+....
T Consensus       237 l-VVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~  289 (419)
T KOG0663|consen  237 L-VVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDK  289 (419)
T ss_pred             e-EEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHH
Confidence            2 336899999999987 589999999999999999999999999987655443


No 149
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96  E-value=2.8e-29  Score=280.74  Aligned_cols=107  Identities=23%  Similarity=0.345  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++|++||||||+||+++.  ...+||+|||++.......... ....+++.|+|||++.+ ..++
T Consensus       111 ~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~  187 (309)
T cd07845         111 KCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD--KGCLKIADFGLARTYGLPAKPM-TPKVVTLWYRAPELLLGCTTYT  187 (309)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECccceeeecCCccCCC-CcccccccccChhhhcCCCCcC
Confidence            345779999999999999999999999999975  4579999999987654322111 11234678999999876 4578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      .++|+|||||++|+|++|.+||.+.+..+..
T Consensus       188 ~~~DvwslG~il~el~~g~~~f~~~~~~~~~  218 (309)
T cd07845         188 TAIDMWAVGCILAELLAHKPLLPGKSEIEQL  218 (309)
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999999999999887655443


No 150
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.95  E-value=3.8e-28  Score=280.30  Aligned_cols=147  Identities=24%  Similarity=0.419  Sum_probs=134.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ..|++.+.||+|+||.||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||+++++.|.+++.+||||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36899999999999999999999999999999986432   123455789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      |||+||+|.+.+.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~--~ikL~DFG~a~~  150 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTDFGLCTG  150 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC--CEEEEeCCCCcc
Confidence            9999999999998888899999999999999999999999999999999999998655  799999999853


No 151
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.95  E-value=8.8e-29  Score=280.26  Aligned_cols=160  Identities=26%  Similarity=0.432  Sum_probs=138.2

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG  265 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GG  265 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||++++++|...+.+||||||++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532   122345678999999999999999999999999999999999999


Q ss_pred             chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCcccc
Q psy5279         266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEYD  344 (1310)
Q Consensus       266 eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~t  344 (1310)
                      +|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+..... ......+||
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~~~~~gt  158 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEeeCCCCcccccCCCcccceecC
Confidence            9999998878899999999999999999999999999999999999998655  7999999999864322 233445677


Q ss_pred             hHHHhh
Q psy5279         345 VRYVRQ  350 (1310)
Q Consensus       345 ~~yv~~  350 (1310)
                      +.|+++
T Consensus       159 ~~y~aP  164 (323)
T cd05571         159 PEYLAP  164 (323)
T ss_pred             ccccCh
Confidence            766654


No 152
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95  E-value=8.9e-29  Score=272.58  Aligned_cols=88  Identities=19%  Similarity=0.282  Sum_probs=73.3

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc--hhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhh
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD--TLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAV  673 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1310)
                      +.|++++.|..|.||+|.+|..+. ++..+|.|.+....+  ...++..|.+.|+.++|++|..+++.+...    +...
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~   75 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRP-TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE----GAVY   75 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcC-CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC----CeEE
Confidence            469999999999999999886654 789999998876433  345677899999999999999999988765    6678


Q ss_pred             HHHHhhcCchhhhhh
Q psy5279         674 LVMEKLQGADVLSYL  688 (1310)
Q Consensus       674 ~~~~~~~~~~~~~~~  688 (1310)
                      +|||+|.|..+.+++
T Consensus        76 lv~e~~~~~~l~~~~   90 (286)
T cd06622          76 MCMEYMDAGSLDKLY   90 (286)
T ss_pred             EEEeecCCCCHHHHH
Confidence            899999998776554


No 153
>KOG0578|consensus
Probab=99.95  E-value=4.8e-29  Score=292.78  Aligned_cols=226  Identities=28%  Similarity=0.415  Sum_probs=188.4

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ......|....+||+|+-|.||.|....+++.||||.+..+....++.+.+|+.+|+.++|+|||.+++.|.-.+.++.|
T Consensus       269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV  348 (550)
T KOG0578|consen  269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV  348 (550)
T ss_pred             CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence            35567899999999999999999999999999999999988777788899999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-C
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-K  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~  337 (1310)
                      ||||+||+|.+.+.. ..++|.+++.+++++|.||+|||.+||+|||||.+|||+..++  .|||+|||++..+.... .
T Consensus       349 MEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g--~vKltDFGFcaqi~~~~~K  425 (550)
T KOG0578|consen  349 MEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG--SVKLTDFGFCAQISEEQSK  425 (550)
T ss_pred             EeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC--cEEEeeeeeeeccccccCc
Confidence            999999998887754 4699999999999999999999999999999999999998776  69999999999887655 6


Q ss_pred             CCCcccchHHHhhh--cCCCc------cccC-------CCCCCCCCCCcchhhhhhh-----------------cccchh
Q psy5279         338 LNPLEYDVRYVRQA--LRHPW------LNFA-------DRKPTEDTPKLNTDALRNY-----------------YNLYKD  385 (1310)
Q Consensus       338 l~~~~~t~~yv~~~--~r~P~------l~~~-------~~~~~~~~p~~~~~~~~~~-----------------~~~~~D  385 (1310)
                      -.+++|||.|+++.  -|.++      +.+|       +.+|    |+++...++.+                 ...++|
T Consensus       426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEP----PYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kd  501 (550)
T KOG0578|consen  426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEP----PYLNENPLRALYLIATNGTPKLKNPEKLSPELKD  501 (550)
T ss_pred             cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCC----CccCCChHHHHHHHhhcCCCCcCCccccCHHHHH
Confidence            67889998777642  11111      1111       1111    33333333322                 344589


Q ss_pred             hchhhhhhhcccCCCCCCccCCCcce
Q psy5279         386 WYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       386 ~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      |...++.-+..+|.++.+.|.||++.
T Consensus       502 FL~~cL~~dv~~RasA~eLL~HpFl~  527 (550)
T KOG0578|consen  502 FLDRCLVVDVEQRASAKELLEHPFLK  527 (550)
T ss_pred             HHHHHhhcchhcCCCHHHHhcChhhh
Confidence            99999999999999999999999973


No 154
>KOG0591|consensus
Probab=99.95  E-value=8.7e-31  Score=285.99  Aligned_cols=167  Identities=24%  Similarity=0.353  Sum_probs=143.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEE-EEEeCCe-EE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHD-SYETKDS-FT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d-~f~~~~~-ly  256 (1310)
                      -...|++.++||+|+||.||++.+..+|..+|.|.|.-.  ..+.++.+..||.+|++|+|||||++++ .|..++. ++
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln   96 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN   96 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence            346699999999999999999999999999999988632  2345667889999999999999999987 5655555 99


Q ss_pred             EEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhh--CC--eeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         257 IISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHR--LS--IAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs--~g--IVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                      ||||||.+|+|...+..    +..++|..+..|+.|+|.||..||+  .+  |+||||||.||+|+.+|  .|||+||||
T Consensus        97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g--vvKLGDfGL  174 (375)
T KOG0591|consen   97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG--VVKLGDFGL  174 (375)
T ss_pred             HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC--ceeeccchh
Confidence            99999999999888752    3459999999999999999999999  55  99999999999998766  899999999


Q ss_pred             ceeecCC-CCCCCcccchHHHh
Q psy5279         329 SRRITSF-GKLNPLEYDVRYVR  349 (1310)
Q Consensus       329 Ar~i~~~-~~l~~~~~t~~yv~  349 (1310)
                      +|.+.+. ....+++|||-|+.
T Consensus       175 ~r~l~s~~tfA~S~VGTPyYMS  196 (375)
T KOG0591|consen  175 GRFLSSKTTFAHSLVGTPYYMS  196 (375)
T ss_pred             HhHhcchhHHHHhhcCCCcccC
Confidence            9988654 34567888888874


No 155
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95  E-value=6e-29  Score=284.61  Aligned_cols=104  Identities=24%  Similarity=0.436  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||+|||++||+||||||+|||++.  ++.+||+|||++........  .....+++.|+|||.+.+..++.
T Consensus       121 ~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~  196 (353)
T cd07850         121 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKE  196 (353)
T ss_pred             HHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEEccCccceeCCCCCC--CCCCcccccccCHHHHhCCCCCC
Confidence            345679999999999999999999999999986  45699999999976543221  12234678999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|||||||++|+|++|..||.+.+...
T Consensus       197 ~~DvwslG~~l~~l~~g~~pf~~~~~~~  224 (353)
T cd07850         197 NVDIWSVGCIMGEMIRGTVLFPGTDHID  224 (353)
T ss_pred             chhhHhHHHHHHHHHHCCCCCCCCCHHH
Confidence            9999999999999999999998776543


No 156
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.95  E-value=4.2e-29  Score=283.24  Aligned_cols=153  Identities=24%  Similarity=0.432  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05595          98 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK--DGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcC--CCCEEecccHHhccccCCCC-ccccccCCcCcCCcccccCCCCCc
Confidence            445679999999999999999999999999975  45699999998864322111 112345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCC-cchh-----cHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHE-VDWI-----TLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~-~~ri-----t~~e~L~H 1102 (1310)
                      ++|+|||||++|+|++|..||.+.+..+....+......++   ..++++++++|.+|+..+ .+|+     ++.+++.|
T Consensus       175 ~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         175 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             hhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            99999999999999999999998887777766665555544   467899999999999754 5566     89999999


Q ss_pred             Ccccc
Q psy5279        1103 EFWHV 1107 (1310)
Q Consensus      1103 ~f~~~ 1107 (1310)
                      +|+..
T Consensus       252 ~~~~~  256 (323)
T cd05595         252 RFFLS  256 (323)
T ss_pred             CCcCC
Confidence            98864


No 157
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95  E-value=1e-29  Score=273.74  Aligned_cols=101  Identities=33%  Similarity=0.627  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc-CCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA-EEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~-~~~ys 1027 (1310)
                      ..++.||++||.+||++||+||||||+|||++.  ++.++|+|||.+...... ........+++.|+|||++. +..++
T Consensus       101 ~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~--~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~  177 (260)
T PF00069_consen  101 LKIAYQILEALAYLHSKGIVHRDIKPENILLDE--NGEVKLIDFGSSVKLSEN-NENFNPFVGTPEYMAPEVLQQGKKYT  177 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEESSBSGGGEEEST--TSEEEESSGTTTEESTST-TSEBSSSSSSGGGSCHHHHTTTSSBS
T ss_pred             ccccccccccccccccccccccccccccccccc--cccccccccccccccccc-cccccccccccccccccccccccccc
Confidence            445679999999999999999999999999984  567999999998754211 12233445678999999998 77889


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|+||||+++|+|++|..||...
T Consensus       178 ~~~Di~slG~il~~l~~~~~p~~~~  202 (260)
T PF00069_consen  178 RKSDIWSLGIILYELLTGKLPFEES  202 (260)
T ss_dssp             THHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred             ccccccccccccccccccccccccc
Confidence            9999999999999999999999865


No 158
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.95  E-value=9.9e-29  Score=286.06  Aligned_cols=147  Identities=27%  Similarity=0.428  Sum_probs=134.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||.||+|.++.+++.||+|++.+...   .....+.+|+.+|++++|||||+++++|.+++.+|||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            58899999999999999999999999999999975321   234467889999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||+||+|.+.+.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+..
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g--~~kL~DFGla~~~  151 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG--HIKLTDFGLCTGF  151 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEEeECCCCccc
Confidence            999999999998877899999999999999999999999999999999999998655  8999999998643


No 159
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.95  E-value=6.4e-28  Score=269.50  Aligned_cols=149  Identities=30%  Similarity=0.483  Sum_probs=131.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .+.|++.+.||+|+||.||+|.++.+|+.||||++..... .....+.+|+.+|+.++||||+++++++.+++.+|+|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            4789999999999999999999999999999999875432 223456789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+. ++|.+.+... +.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~  154 (303)
T cd07869          84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG--ELKLADFGLARAKS  154 (303)
T ss_pred             CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEECCCCcceecc
Confidence            996 5676666543 5689999999999999999999999999999999999998655  79999999998653


No 160
>KOG0198|consensus
Probab=99.95  E-value=4.7e-29  Score=283.56  Aligned_cols=152  Identities=22%  Similarity=0.343  Sum_probs=111.7

Q ss_pred             ecceeeeeeeCCEEEEEEe-ccCC--CcceeeecccCCcccccccccC--CCchhHHHHHHHHHHHHHHHHHCCceeccc
Q psy5279         898 EKPITIPVVIGDKLEMKCL-AVGE--PKPVIQWFKLGTSTLCYLPIVI--PTTHKDAYCVTSVLDGLQYLHWRGLCHLNI  972 (1310)
Q Consensus       898 E~~~~~~l~~g~~l~~~~l-~~G~--p~~vi~~f~~g~~l~~~L~~~i--~~~~~~~~i~~QIl~AL~yLHs~gIVHRDL  972 (1310)
                      |..+...+.|.++|.+... ...+  ...++..|..++++..++...-  ..+..++.+.+||++||.|||++|||||||
T Consensus        64 Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~Di  143 (313)
T KOG0198|consen   64 EIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDI  143 (313)
T ss_pred             HHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCc
Confidence            3333444445566655553 2222  3556777778888888776542  355567888999999999999999999999


Q ss_pred             CCCcEEEeecCCCcEEEEeeccceeeccCC--cccccCCCCCCcccccccccCCC-CCCccchhHHHHHHHHHhcCCCCC
Q psy5279         973 EPDNVVMASVRSVQVKLIDLGCTQRVTKLG--TLIHPINTPNPEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus       973 KPeNILl~~~~~~~VKL~DFGlAk~~~~~g--~~~~~~~tGtp~Y~APEvl~~~~-ys~ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                      ||+|||++.. ++.+||+|||+++......  ........|||.|||||++..+. .+.++|||||||++.||++|.+||
T Consensus       144 K~~NiLl~~~-~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW  222 (313)
T KOG0198|consen  144 KPANILLDPS-NGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPW  222 (313)
T ss_pred             ccceEEEeCC-CCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcc
Confidence            9999999862 3569999999988665311  11223356889999999999632 234899999999999999999998


Q ss_pred             C
Q psy5279        1050 R 1050 (1310)
Q Consensus      1050 ~ 1050 (1310)
                      .
T Consensus       223 ~  223 (313)
T KOG0198|consen  223 S  223 (313)
T ss_pred             h
Confidence            5


No 161
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.95  E-value=5.4e-28  Score=277.17  Aligned_cols=149  Identities=26%  Similarity=0.477  Sum_probs=136.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||+||+|.+..+|+.||||++....   ......+.+|+.+|+.++||||++++++|.+++.+||||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            46899999999999999999999999999999997532   223445778999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||+||+|.+.+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~  152 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG--HIKLSDFGLCTGLK  152 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEeecccceecc
Confidence            9999999999998878899999999999999999999999999999999999998655  79999999998754


No 162
>KOG0659|consensus
Probab=99.95  E-value=1.8e-28  Score=266.86  Aligned_cols=108  Identities=23%  Similarity=0.354  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      ...++.|++.||+|||++.|+||||||.|+|+++  ++.+||+|||+|+.........+. ..-|..|+|||.+.|. .|
T Consensus       103 iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~--~g~lKiADFGLAr~f~~p~~~~~~-~V~TRWYRAPELLfGsr~Y  179 (318)
T KOG0659|consen  103 IKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS--DGQLKIADFGLARFFGSPNRIQTH-QVVTRWYRAPELLFGSRQY  179 (318)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC--CCcEEeecccchhccCCCCccccc-ceeeeeccChHHhccchhc
Confidence            3456779999999999999999999999999986  567999999999877543332221 1346899999999876 58


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      +..+|+||.|||+.||+-|.+-|.|+++-+..
T Consensus       180 g~~VDmWavGCI~AELllr~P~fpG~sDidQL  211 (318)
T KOG0659|consen  180 GTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL  211 (318)
T ss_pred             CCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence            99999999999999999999999998875543


No 163
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95  E-value=2.8e-29  Score=312.64  Aligned_cols=95  Identities=23%  Similarity=0.365  Sum_probs=85.4

Q ss_pred             cccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhccCHHHHHHHHHhhhcCCCC
Q psy5279        1141 KEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGK 1220 (1310)
Q Consensus      1141 ~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~k 1220 (1310)
                      .+.|||++...+|+.++||||+||++|+||+|.+||.+.+..+.+..+....+.++.....++.++++||.+||..||.+
T Consensus       545 ~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~  624 (669)
T cd05610         545 DYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTK  624 (669)
T ss_pred             cccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhH
Confidence            35799999999999999999999999999999999999999888888877766665444578999999999999999999


Q ss_pred             CCCHHHhhcCCccCC
Q psy5279        1221 RPTVEECHENRWLVP 1235 (1310)
Q Consensus      1221 RpTa~e~L~HpWl~~ 1235 (1310)
                      |||+.|+|+||||..
T Consensus       625 R~ta~e~l~h~~~~~  639 (669)
T cd05610         625 RAGLKELKQHPLFHG  639 (669)
T ss_pred             CcCHHHHHhCHhhcC
Confidence            999999999999854


No 164
>KOG0612|consensus
Probab=99.95  E-value=4.1e-29  Score=307.96  Aligned_cols=186  Identities=24%  Similarity=0.376  Sum_probs=158.4

Q ss_pred             CcceeeecccCCcccccccccC-CCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeec
Q psy5279         921 PKPVIQWFKLGTSTLCYLPIVI-PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT  999 (1310)
Q Consensus       921 p~~vi~~f~~g~~l~~~L~~~i-~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~  999 (1310)
                      ...||+|+. ||++..+|.... ..+.-++||+..|+.||+-||+.|+|||||||+||||+.  .++|||+|||.+-.+.
T Consensus       150 LYlVMdY~p-GGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  150 LYLVMDYMP-GGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLADFGSCLKMD  226 (1317)
T ss_pred             eEEEEeccc-CchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeeccchhHHhcC
Confidence            345666665 445555554332 344558889999999999999999999999999999986  6789999999988888


Q ss_pred             cCCcccccCCCCCCcccccccccC-----CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccc--cccccccc
Q psy5279        1000 KLGTLIHPINTPNPEFAAPEVLAE-----EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV--RYRFEYLF 1072 (1310)
Q Consensus      1000 ~~g~~~~~~~tGtp~Y~APEvl~~-----~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~--~~~f~~~~ 1072 (1310)
                      ..|+.......|||.|.+||++..     +.|+..|||||+||++||||.|..||+.++..+++.+|..-  .+.||...
T Consensus       227 ~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~  306 (1317)
T KOG0612|consen  227 ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDET  306 (1317)
T ss_pred             CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCccc
Confidence            889888888999999999999962     45889999999999999999999999999999999999776  56677333


Q ss_pred             hhccHHHHHHHHHhccCCcchhc---HHhhhCCCccccccc
Q psy5279        1073 KELTQEATRFLMLIFKHEVDWIT---LANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1073 ~~lS~eakdLL~~il~~~~~rit---~~e~L~H~f~~~~~l 1110 (1310)
                       .+|.++++||..++.++..|..   +.++-.|+||...+.
T Consensus       307 -~VSeeakdLI~~ll~~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  307 -DVSEEAKDLIEALLCDREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             -ccCHHHHHHHHHHhcChhhhcccccHHHHHhCccccCCCh
Confidence             4999999999999999998888   999999999987765


No 165
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.95  E-value=1.4e-28  Score=279.32  Aligned_cols=106  Identities=22%  Similarity=0.408  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc---ccCCCCCCcccccccccC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI---HPINTPNPEFAAPEVLAE-E 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~---~~~~tGtp~Y~APEvl~~-~ 1024 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++..........   .....+++.|+|||.+.+ .
T Consensus       110 ~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  187 (334)
T cd07855         110 RYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE--DCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLP  187 (334)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCc
Confidence            344569999999999999999999999999985  5679999999987653322111   112346788999999866 4


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++.++|+|||||++|+|++|..||.+.+...
T Consensus       188 ~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~  219 (334)
T cd07855         188 EYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH  219 (334)
T ss_pred             ccccccchHHHHHHHHHHHcCCCccCCCChHH
Confidence            58899999999999999999999998765543


No 166
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.95  E-value=6.6e-28  Score=273.60  Aligned_cols=163  Identities=25%  Similarity=0.382  Sum_probs=142.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||+|.+..+|+.||+|++.+..   ......+.+|+.+|+.++||||+++++++...+.+||||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            36899999999999999999999999999999997542   123455788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ||++||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+....  ...
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kL~Dfg~a~~~~~--~~~  156 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG--HIKLTDFGLSKGIVT--YAN  156 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEEEeCcCCccccc--ccC
Confidence            9999999999998877899999999999999999999999999999999999998655  799999999987643  233


Q ss_pred             CcccchHHHh
Q psy5279         340 PLEYDVRYVR  349 (1310)
Q Consensus       340 ~~~~t~~yv~  349 (1310)
                      ..++|+.|++
T Consensus       157 ~~~gt~~y~a  166 (333)
T cd05600         157 SVVGSPDYMA  166 (333)
T ss_pred             CcccCccccC
Confidence            4455555544


No 167
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.95  E-value=8.3e-29  Score=269.97  Aligned_cols=97  Identities=21%  Similarity=0.349  Sum_probs=81.0

Q ss_pred             CCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCCc--c
Q psy5279         592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPSTT--A  668 (1310)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~  668 (1310)
                      ++|+..|.....|.+|.||.|.+|..+ +++..+|.|.+.+.......+.+|...|+.+ +|++|..+++.+.....  .
T Consensus         2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~-~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           2 RDPAGIFELVELVGNGTYGQVYKGRHV-KTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             CChhhhhhHHHheeecCCeEEEEEEEc-CCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence            578899999999999999999988665 4788999999999988888899999999998 79999999988764322  1


Q ss_pred             cchhhHHHHhhcCchhhhhhh
Q psy5279         669 SNIAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       669 ~~~~~~~~~~~~~~~~~~~~~  689 (1310)
                      .+...+|||++.|.++..++.
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~  101 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIK  101 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHH
Confidence            245678999999988877654


No 168
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.95  E-value=7.3e-29  Score=277.15  Aligned_cols=106  Identities=22%  Similarity=0.320  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec--CCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV--RSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~--~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      ...++.||+.||.|||++||+||||||+|||+...  ....+||+|||+++.......  .......+++.|+|||++.+
T Consensus       110 ~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07867         110 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             HHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcC
Confidence            34567899999999999999999999999999532  245799999999976532211  11122356789999999977


Q ss_pred             C-CCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1024 E-PIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1024 ~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      . .++.++|||||||++|+|++|.+||....
T Consensus       190 ~~~~~~~~DiwSlG~il~el~tg~~~f~~~~  220 (317)
T cd07867         190 ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             CCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence            4 57899999999999999999999997654


No 169
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.95  E-value=1.1e-28  Score=270.44  Aligned_cols=105  Identities=24%  Similarity=0.478  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.||+.||.|||++||+|+||||+||+++.  ...++|+|||++...............+++.|+|||.+.+. .++.
T Consensus       103 ~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  180 (286)
T cd07832         103 SYMRMLLKGVAYMHANGIMHRDLKPANLLISA--DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDP  180 (286)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC--CCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCc
Confidence            34679999999999999999999999999986  45699999999876543322112233567899999998755 4688


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++||||+||++|+|++|.+||.+.+..+
T Consensus       181 ~~Di~slG~~l~~l~tg~~~~~~~~~~~  208 (286)
T cd07832         181 GVDLWAVGCIFAELLNGSPLFPGENDIE  208 (286)
T ss_pred             hhHHHHHHHHHHHHHcCCcCcCCCCHHH
Confidence            9999999999999999999998766543


No 170
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.95  E-value=6.9e-29  Score=281.93  Aligned_cols=100  Identities=28%  Similarity=0.482  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (327)
T cd05617          99 RFYAAEICIALNFLHERGIIYRDLKLDNVLLDA--DGHIKLTDYGMCKEGLGPGD-TTSTFCGTPNYIAPEILRGEEYGF  175 (327)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC--CCCEEEeccccceeccCCCC-ceecccCCcccCCHHHHCCCCCCc
Confidence            345679999999999999999999999999986  45699999999875322111 112345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|||||||++|+|++|..||..
T Consensus       176 ~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         176 SVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             hheeehhHHHHHHHHhCCCCCCc
Confidence            99999999999999999999964


No 171
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.95  E-value=3.7e-28  Score=276.37  Aligned_cols=160  Identities=28%  Similarity=0.443  Sum_probs=137.9

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG  265 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GG  265 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||+++++++...+.+|+||||++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532   223445778999999999999999999999999999999999999


Q ss_pred             chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCcccc
Q psy5279         266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEYD  344 (1310)
Q Consensus       266 eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~t  344 (1310)
                      +|...+.....+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.... .......++|
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~~~~~gt  158 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--HIKITDFGLCKEGITDAATMKTFCGT  158 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC--cEEEecCcCCccCCCcccccccccCC
Confidence            9999988777899999999999999999999999999999999999998655  799999999986432 2233445667


Q ss_pred             hHHHhh
Q psy5279         345 VRYVRQ  350 (1310)
Q Consensus       345 ~~yv~~  350 (1310)
                      +.|+++
T Consensus       159 ~~y~aP  164 (328)
T cd05593         159 PEYLAP  164 (328)
T ss_pred             cCccCh
Confidence            666554


No 172
>KOG0582|consensus
Probab=99.95  E-value=9e-28  Score=275.14  Aligned_cols=230  Identities=21%  Similarity=0.362  Sum_probs=185.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .-.+.|++.++||.|.-++||+|+++.+++.||||++..... ...+.+.+|+..|+.++|||||+++.+|..+..+|+|
T Consensus        23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV  102 (516)
T KOG0582|consen   23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV  102 (516)
T ss_pred             CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence            345789999999999999999999999999999999986543 3457899999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         259 SELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |-||.+|++++.+...  ..+.|.-++.+++++++||.|||.+|.||||||+.||||+++|  .|||+|||.+-.+-..|
T Consensus       103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG--~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG--TVKLADFGVSASLFDSG  180 (516)
T ss_pred             ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC--cEEEcCceeeeeecccC
Confidence            9999999999998753  4599999999999999999999999999999999999999877  89999999877664443


Q ss_pred             C-----CCCcccchHHHhhhc------------------------CCCccccCCCCCC-------CCCC------Ccchh
Q psy5279         337 K-----LNPLEYDVRYVRQAL------------------------RHPWLNFADRKPT-------EDTP------KLNTD  374 (1310)
Q Consensus       337 ~-----l~~~~~t~~yv~~~~------------------------r~P~l~~~~~~~~-------~~~p------~~~~~  374 (1310)
                      .     .+++.+|+.|+++..                        .+.-.+|.+..|+       -+.|      -++.+
T Consensus       181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d  260 (516)
T KOG0582|consen  181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKD  260 (516)
T ss_pred             ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChH
Confidence            1     156677776655432                        1111222222211       1112      23445


Q ss_pred             hhhhhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         375 ALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       375 ~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +.+.+......+++.+++++..+|+|+.+.|.|+|..
T Consensus       261 ~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk  297 (516)
T KOG0582|consen  261 EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK  297 (516)
T ss_pred             HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence            5555555567789999999999999999999999963


No 173
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.95  E-value=6e-28  Score=280.21  Aligned_cols=168  Identities=24%  Similarity=0.383  Sum_probs=144.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..+.|++.+.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.+++.++||||++++++|.+++.+|+
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            4578999999999999999999999999999999997532   1234457789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||||+||+|.+.+... .+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+...+.
T Consensus       121 v~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~--~~kL~DFG~a~~~~~~~~  197 (370)
T cd05621         121 VMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKLADFGTCMKMDETGM  197 (370)
T ss_pred             EEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEEecccceecccCCc
Confidence            99999999999988653 589999999999999999999999999999999999998655  799999999998754332


Q ss_pred             --CCCcccchHHHhhh
Q psy5279         338 --LNPLEYDVRYVRQA  351 (1310)
Q Consensus       338 --l~~~~~t~~yv~~~  351 (1310)
                        ..+.+||+.|+++.
T Consensus       198 ~~~~~~~gt~~Y~aPE  213 (370)
T cd05621         198 VRCDTAVGTPDYISPE  213 (370)
T ss_pred             eecccCCCCcccCCHH
Confidence              23456777776643


No 174
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.95  E-value=2.9e-28  Score=274.42  Aligned_cols=158  Identities=25%  Similarity=0.408  Sum_probs=136.4

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ||+|+||.||+|.+..+++.||+|++....   ......+.+|+.+|++++|||||+++++|...+.+|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999999999999999997532   22344577899999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCcccchH
Q psy5279         268 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEYDVR  346 (1310)
Q Consensus       268 ~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~t~~  346 (1310)
                      .+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ......+||+.
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  158 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG--HIALCDFGLCKLNMKDDDKTNTFCGTPE  158 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC--cEEEEECcccccCccCCCccccccCCcc
Confidence            99998888899999999999999999999999999999999999998655  7999999999864322 22334566666


Q ss_pred             HHhh
Q psy5279         347 YVRQ  350 (1310)
Q Consensus       347 yv~~  350 (1310)
                      |+++
T Consensus       159 y~aP  162 (312)
T cd05585         159 YLAP  162 (312)
T ss_pred             cCCH
Confidence            6553


No 175
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.95  E-value=1.7e-27  Score=264.56  Aligned_cols=148  Identities=28%  Similarity=0.432  Sum_probs=131.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ++|++.+.||+|+||.||+|.++.+++.||+|+++.... .....+.+|+.+|+.++||||+++++++.+++.+|+||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            569999999999999999999999999999999875432 2344577899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.| +|.+.+...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~DfG~~~~~~  154 (288)
T cd07871          85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG--ELKLADFGLARAKS  154 (288)
T ss_pred             CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEECcCcceeecc
Confidence            985 8888776544 478999999999999999999999999999999999998665  79999999998653


No 176
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.95  E-value=1.5e-27  Score=275.84  Aligned_cols=148  Identities=24%  Similarity=0.433  Sum_probs=134.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|.+.+.||+|+||.||+|.++.+|+.||||++.+..   ......+.+|+.+|++++|||||+++++|.+.+.+||||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            36889999999999999999999999999999986532   123345788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||++||+|.+.+.....+++..++.++.|++.||+|||++||+||||||+|||++.++  .+||+|||+|+.+
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~--~~kl~DfGla~~~  151 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--HIKLSDFGLSTGF  151 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEEeeccccccc
Confidence            9999999999998877899999999999999999999999999999999999998655  7999999999754


No 177
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.95  E-value=3.5e-28  Score=267.10  Aligned_cols=104  Identities=22%  Similarity=0.357  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC-CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-IF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-ys 1027 (1310)
                      ..++.||+.||+|||++|++||||+|+||+++.  +..+||+|||++........ ......+++.|+|||.+.+.. ++
T Consensus       103 ~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  179 (284)
T cd07860         103 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGCKYYS  179 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEeeccchhhcccCcc-ccccccccccccCCeEEecCCCCC
Confidence            345679999999999999999999999999986  45699999998865432111 112223567899999987654 57


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|..||.+.+..
T Consensus       180 ~~~Dv~slG~il~~l~tg~~p~~~~~~~  207 (284)
T cd07860         180 TAVDIWSLGCIFAEMVTRRALFPGDSEI  207 (284)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence            8899999999999999999999876543


No 178
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.95  E-value=1.3e-28  Score=270.00  Aligned_cols=105  Identities=25%  Similarity=0.426  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  ++.+||+|||++........ ......++..|+|||++.+ ..++
T Consensus       103 ~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  179 (286)
T cd07847         103 KKIIWQTLQAVNFCHKHNCIHRDVKPENILITK--QGQIKLCDFGFARILTGPGD-DYTDYVATRWYRAPELLVGDTQYG  179 (286)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCChhhEEEcC--CCcEEECccccceecCCCcc-cccCcccccccCCHHHHhCCCCcC
Confidence            345679999999999999999999999999975  45799999999876543321 1122345678999999876 4578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++|+|||||++|+|++|..||.+.+..+
T Consensus       180 ~~~Di~slG~i~~~l~~g~~p~~~~~~~~  208 (286)
T cd07847         180 PPVDVWAIGCVFAELLTGQPLWPGKSDVD  208 (286)
T ss_pred             chhhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence            89999999999999999999998766543


No 179
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95  E-value=1.5e-28  Score=269.70  Aligned_cols=105  Identities=23%  Similarity=0.364  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......+++.|+|||++.+. .+
T Consensus       103 ~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~  179 (285)
T cd07861         103 VKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN--KGVIKLADFGLARAFGIPVR-VYTHEVVTLWYRAPEVLLGSPRY  179 (285)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC--CCcEEECcccceeecCCCcc-cccCCcccccccChHHhcCCCCc
Confidence            3456789999999999999999999999999975  45699999999865432211 11122456889999998764 57


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      +.++|+|||||++|+|++|.+||.+.+..
T Consensus       180 ~~~~Dv~slG~il~~l~tg~~~~~~~~~~  208 (285)
T cd07861         180 STPVDIWSIGTIFAEMATKKPLFHGDSEI  208 (285)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence            88999999999999999999999876543


No 180
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.95  E-value=2.2e-28  Score=271.14  Aligned_cols=106  Identities=21%  Similarity=0.370  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccCC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAEE- 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~~- 1024 (1310)
                      ..++.||+.||.|||++||+|+||||+|||++.  ...+||+|||++.........   ......+++.|+|||.+.+. 
T Consensus       122 ~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  199 (310)
T cd07865         122 KKVMKMLLNGLYYIHRNKILHRDMKAANILITK--DGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGER  199 (310)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC--CCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCc
Confidence            345679999999999999999999999999975  457999999998654321111   11122356789999988765 


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++.++|+|||||++|+|++|.+||.+.+...
T Consensus       200 ~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~  231 (310)
T cd07865         200 DYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH  231 (310)
T ss_pred             ccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            47889999999999999999999998765443


No 181
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.95  E-value=4.5e-28  Score=278.02  Aligned_cols=167  Identities=23%  Similarity=0.335  Sum_probs=144.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCC-cEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSG-RNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg-~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -.+.|++.+.||+|+||.||+|.++.++ ..||+|++.+..   ....+.+.+|+.+|+.++|||||++++++.+++.+|
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            3467999999999999999999977665 789999986432   223456788999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +||||++||+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+... 
T Consensus       108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~ikL~DFG~a~~~~~~-  184 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--FIKMTDFGFAKVVDTR-  184 (340)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEecCCCCeecCCC-
Confidence            9999999999999998888899999999999999999999999999999999999997654  8999999999876432 


Q ss_pred             CCCCcccchHHHhhh
Q psy5279         337 KLNPLEYDVRYVRQA  351 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~  351 (1310)
                       ..+.+||+.|+++.
T Consensus       185 -~~~~~gt~~y~aPE  198 (340)
T PTZ00426        185 -TYTLCGTPEYIAPE  198 (340)
T ss_pred             -cceecCChhhcCHH
Confidence             23456777776643


No 182
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.95  E-value=7.3e-28  Score=276.71  Aligned_cols=149  Identities=26%  Similarity=0.470  Sum_probs=135.9

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||+|.++.+|+.||+|++....   ......+.+|+.+|..++||||+++++.|.+.+.+||||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46889999999999999999999999999999997432   223456788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||+||+|.+.+.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~--~vkL~DfG~~~~~~  152 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG--HVKLSDFGLCTGLK  152 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEeeccCCcccc
Confidence            9999999999998888899999999999999999999999999999999999998655  89999999998654


No 183
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.95  E-value=3.4e-28  Score=275.77  Aligned_cols=159  Identities=26%  Similarity=0.439  Sum_probs=136.1

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG  265 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GG  265 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++....   ......+.+|+.+|+.++||||++++++|...+.+||||||++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532   123345678999999999999999999999999999999999999


Q ss_pred             chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCcccc
Q psy5279         266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEYD  344 (1310)
Q Consensus       266 eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~t  344 (1310)
                      +|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......++|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~gt  158 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC--CEEecccHHhccccCCCCccccccCC
Confidence            9999988877899999999999999999999999999999999999998655  799999999986422 2223344566


Q ss_pred             hHHHh
Q psy5279         345 VRYVR  349 (1310)
Q Consensus       345 ~~yv~  349 (1310)
                      +.|++
T Consensus       159 ~~y~a  163 (323)
T cd05595         159 PEYLA  163 (323)
T ss_pred             cCcCC
Confidence            55554


No 184
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.95  E-value=1.4e-27  Score=263.15  Aligned_cols=149  Identities=21%  Similarity=0.386  Sum_probs=132.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.+.||+|+||.||+|+++.+++.||+|++....  ....+.+.+|+.+|+.++||||++++++|...+.+|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46899999999999999999999999999999987542  2335567899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |++++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~--~~kl~Dfg~~~~~~  151 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND--VLKLCDFGFARNLS  151 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEEeeccCccccc
Confidence            999987765554445699999999999999999999999999999999999998655  79999999998764


No 185
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95  E-value=3.9e-28  Score=261.48  Aligned_cols=101  Identities=26%  Similarity=0.457  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+|+||||+||+++.  ...+||+|||+++........ .....+++.|+|||++.+..++.+
T Consensus       105 ~i~~~l~~al~~lH~~~i~h~dl~~~nili~~--~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~  181 (256)
T cd08529         105 RFFIQILLGLAHLHSKKILHRDIKSLNLFLDA--YDNVKIGDLGVAKLLSDNTNF-ANTIVGTPYYLSPELCEDKPYNEK  181 (256)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCcceEEEeC--CCCEEEcccccceeccCccch-hhccccCccccCHHHhcCCCCCCc
Confidence            34669999999999999999999999999986  456999999998765432221 223356789999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +|+|||||++|+|++|..||...+
T Consensus       182 ~Di~slG~il~~l~~g~~p~~~~~  205 (256)
T cd08529         182 SDVWALGVVLYECCTGKHPFDANN  205 (256)
T ss_pred             cchHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999997654


No 186
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.95  E-value=9.8e-28  Score=271.67  Aligned_cols=160  Identities=27%  Similarity=0.436  Sum_probs=137.7

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG  265 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GG  265 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||++++++|...+.+||||||++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532   122345678999999999999999999999999999999999999


Q ss_pred             chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       266 eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      +|...+.....+++..+..++.||+.||+|||+ +||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCG  158 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--CEEEecCCCCeecCCCCcccccccC
Confidence            999998877789999999999999999999997 8999999999999998655  799999999986432 223344567


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (325)
T cd05594         159 TPEYLAP  165 (325)
T ss_pred             CcccCCH
Confidence            7777654


No 187
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.95  E-value=1.5e-28  Score=269.97  Aligned_cols=92  Identities=30%  Similarity=0.412  Sum_probs=75.6

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc-hhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-TLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      .|.+.|+++..|..|.||.|.++.-+. ++..+|.|.+..... .......|...|++|+|++|..+++.+...    +.
T Consensus         2 ~~~~~~~i~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~   76 (280)
T cd06611           2 NPNDIWEIIGELGDGAFGKVYKAQHKE-TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE----NK   76 (280)
T ss_pred             CchhHHHHHHHhcCCCCceEEEEEEcC-CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC----Ce
Confidence            377889999999999999998886554 788999999876543 344677899999999999999999988765    45


Q ss_pred             hhHHHHhhcCchhhhhhh
Q psy5279         672 AVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~  689 (1310)
                      ..+|||++.|.++..++.
T Consensus        77 ~~lv~e~~~~~~L~~~~~   94 (280)
T cd06611          77 LWILIEFCDGGALDSIML   94 (280)
T ss_pred             EEEEeeccCCCcHHHHHH
Confidence            678999999988766653


No 188
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.95  E-value=1.8e-27  Score=270.36  Aligned_cols=151  Identities=27%  Similarity=0.528  Sum_probs=137.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|.+.+.||+|+||.||+|.+..+|+.||||++.+..   ......+.+|+.+|..++||||+++++++.+++.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            46899999999999999999999999999999997532   233456788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||++||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+...
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG--HIKLADFGLCKKMNKA  154 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEeecCCCCccCccc
Confidence            9999999999998877899999999999999999999999999999999999998665  7999999999876543


No 189
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95  E-value=3.6e-28  Score=272.83  Aligned_cols=100  Identities=24%  Similarity=0.388  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||+ +|++||||||+|||++.  +..+||+|||++.......   .....+++.|+|||++.+..++.
T Consensus       103 ~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~  177 (308)
T cd06615         103 KISIAVLRGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYTV  177 (308)
T ss_pred             HHHHHHHHHHHHHHhhCCEEECCCChHHEEEec--CCcEEEccCCCcccccccc---cccCCCCcCccChhHhcCCCCCc
Confidence            346799999999998 69999999999999975  4569999999886543211   12235678999999998888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|+|||||++|+|++|..||.+.+.
T Consensus       178 ~~DiwslG~~l~~l~~g~~p~~~~~~  203 (308)
T cd06615         178 QSDIWSLGLSLVEMAIGRYPIPPPDA  203 (308)
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCcch
Confidence            99999999999999999999976543


No 190
>KOG0610|consensus
Probab=99.95  E-value=6.8e-28  Score=274.51  Aligned_cols=241  Identities=24%  Similarity=0.297  Sum_probs=184.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHH---HHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS---LFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~---~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++++.||.|.-|+||+|..+.++..+|+|+|.+.....++   .+..|-+||+.++||.+++||..|+++...+|||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            6788999999999999999999999999999999876443333   3556899999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC--
Q psy5279         260 ELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF--  335 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~--  335 (1310)
                      |||+||+|.....++  ..|+|..+++|+.+++.||+|||.+|||+||||||||||-++|  ||-|+||-|+......  
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredG--HIMLsDFDLS~~~~~~Pt  234 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDG--HIMLSDFDLSLRCPVSPT  234 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCC--cEEeeeccccccCCCCCe
Confidence            999999998888765  4599999999999999999999999999999999999998776  9999999998754210  


Q ss_pred             --------------------------------C-----------------------CCCCcccchHHHhh----------
Q psy5279         336 --------------------------------G-----------------------KLNPLEYDVRYVRQ----------  350 (1310)
Q Consensus       336 --------------------------------~-----------------------~l~~~~~t~~yv~~----------  350 (1310)
                                                      .                       ..+.++||.+|+++          
T Consensus       235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs  314 (459)
T KOG0610|consen  235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS  314 (459)
T ss_pred             eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence                                            0                       00124566666653          


Q ss_pred             ---------------hcCCCccccCCCCCCCCC----CCcchhhhhhhcccchhhchhhhhhhcccCCC----CCCccCC
Q psy5279         351 ---------------ALRHPWLNFADRKPTEDT----PKLNTDALRNYYNLYKDWYGNAAVRRYYRRRP----LNSCYTH  407 (1310)
Q Consensus       351 ---------------~~r~P~l~~~~~~~~~~~----p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~----~~~cl~h  407 (1310)
                                     .+..||-+-+.+.+..+.    +.+....  .+...++|.+..+++++..+|.-    +.++-+|
T Consensus       315 AVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  315 AVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH  392 (459)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence                           233455554444443221    1110000  23355689999999999999976    8899999


Q ss_pred             CcceecC--CCCCCCCCCCCcc
Q psy5279         408 PSRMIYP--PGTQFTPEPTPDK  427 (1310)
Q Consensus       408 pw~~~~~--~~~~~tp~~~p~~  427 (1310)
                      |+..+..  ---+.+|+.+|..
T Consensus       393 pFF~gVnWaLir~~~PP~iP~~  414 (459)
T KOG0610|consen  393 PFFEGVNWALIRCARPPEIPKP  414 (459)
T ss_pred             ccccCCChhheeccCCCcCCCc
Confidence            9964322  3344555556665


No 191
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95  E-value=4.2e-28  Score=274.57  Aligned_cols=104  Identities=24%  Similarity=0.436  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------cccCCCCCCccccccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..++++|||.+......+..      ......++..|+|||++.
T Consensus       104 ~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (327)
T cd08227         104 AYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQ  181 (327)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCChhhEEEec--CCcEEEcccchhhccccccccccccccccccccceecccChHHhh
Confidence            345679999999999999999999999999986  456899999865433211110      011123456799999997


Q ss_pred             C--CCCCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1023 E--EPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1023 ~--~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      +  ..++.++|||||||++|+|++|..||.....
T Consensus       182 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  215 (327)
T cd08227         182 QNLQGYDAKSDIYSVGITACELANGHVPFKDMPA  215 (327)
T ss_pred             cccCCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence            6  4688999999999999999999999976544


No 192
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.95  E-value=3.3e-28  Score=269.71  Aligned_cols=89  Identities=29%  Similarity=0.388  Sum_probs=72.4

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC-cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchh
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS-HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA  672 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  672 (1310)
                      |.++|+++..|..|.||.|.++..+ .++..++.|.+.-. .+.......|...++.+.|++|..+.+.+...    +..
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~   84 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNK-ETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD----GKL   84 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEEC-CCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC----CeE
Confidence            5689999999999999999988444 47889999998643 33456677899999999999999998887654    567


Q ss_pred             hHHHHhhcCchhhhh
Q psy5279         673 VLVMEKLQGADVLSY  687 (1310)
Q Consensus       673 ~~~~~~~~~~~~~~~  687 (1310)
                      .+|||++.|..+..+
T Consensus        85 ~lv~e~~~~~~l~~~   99 (292)
T cd06644          85 WIMIEFCPGGAVDAI   99 (292)
T ss_pred             EEEEecCCCCcHHHH
Confidence            889999998876544


No 193
>KOG0582|consensus
Probab=99.95  E-value=8.5e-28  Score=275.35  Aligned_cols=154  Identities=27%  Similarity=0.369  Sum_probs=126.2

Q ss_pred             eecceeeeeeeCCEEEEEE-eccCCCcceeeecccCCcccccccccCC---CchhHHHHHHHHHHHHHHHHHCCceeccc
Q psy5279         897 REKPITIPVVIGDKLEMKC-LAVGEPKPVIQWFKLGTSTLCYLPIVIP---TTHKDAYCVTSVLDGLQYLHWRGLCHLNI  972 (1310)
Q Consensus       897 rE~~~~~~l~~g~~l~~~~-l~~G~p~~vi~~f~~g~~l~~~L~~~i~---~~~~~~~i~~QIl~AL~yLHs~gIVHRDL  972 (1310)
                      ||+..|--+.|++++.+.| ..+++...++.-|..+|+++.++....+   ++...+.++++++.||.|||.+|.|||||
T Consensus        73 kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdv  152 (516)
T KOG0582|consen   73 KEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDV  152 (516)
T ss_pred             HHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceeccc
Confidence            4555566677999998888 5667777888888889998888866544   45667889999999999999999999999


Q ss_pred             CCCcEEEeecCCCcEEEEeeccceeeccCCcc--cc-cCCCCCCcccccccccC--CCCCCccchhHHHHHHHHHhcCCC
Q psy5279         973 EPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IH-PINTPNPEFAAPEVLAE--EPIFPQTDVWSAGVLAYVLLSGAS 1047 (1310)
Q Consensus       973 KPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~-~~~tGtp~Y~APEvl~~--~~ys~ksDIWSLGViLyeLLtG~~ 1047 (1310)
                      |+.||||++  ++.|||+|||++..+...|..  .. ....|+|+|||||++..  .+|+.|+||||||+...||.+|..
T Consensus       153 KAgnILi~~--dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~a  230 (516)
T KOG0582|consen  153 KAGNILIDS--DGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHA  230 (516)
T ss_pred             ccccEEEcC--CCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCC
Confidence            999999987  567999999987655444422  11 44578999999999654  379999999999999999999999


Q ss_pred             CCCCC
Q psy5279        1048 PFRGQ 1052 (1310)
Q Consensus      1048 PF~g~ 1052 (1310)
                      ||...
T Consensus       231 Pf~k~  235 (516)
T KOG0582|consen  231 PFSKY  235 (516)
T ss_pred             CcccC
Confidence            99643


No 194
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.95  E-value=2e-28  Score=269.67  Aligned_cols=88  Identities=31%  Similarity=0.385  Sum_probs=68.9

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc-chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhh
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAV  673 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1310)
                      .+.|+.+.+|..|.||.|.++..+. ++..++.|.+.... ........|...++.++|++|..+++.|...    +...
T Consensus         4 ~~~~~i~~~lg~g~~g~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~----~~~~   78 (282)
T cd06643           4 EEFWEIIGELGDGAFGKVYKAQNKE-TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE----NNLW   78 (282)
T ss_pred             HHHHHHHhhcccCCCeEEEEEEECC-CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC----CEEE
Confidence            3558899999999999999886655 67788888886543 3455567789999999999999998887654    5567


Q ss_pred             HHHHhhcCchhhhh
Q psy5279         674 LVMEKLQGADVLSY  687 (1310)
Q Consensus       674 ~~~~~~~~~~~~~~  687 (1310)
                      +|||++.|..+..+
T Consensus        79 ~v~e~~~~~~l~~~   92 (282)
T cd06643          79 ILIEFCAGGAVDAV   92 (282)
T ss_pred             EEEEecCCCcHHHH
Confidence            88998888765443


No 195
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.95  E-value=2e-28  Score=270.66  Aligned_cols=100  Identities=24%  Similarity=0.407  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||++........  .....|++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~  173 (277)
T cd05607          98 IHYSAQITCGILHLHSMDIVYRDMKPENVLLDD--QGNCRLSDLGLAVELKDGKT--ITQRAGTNGYMAPEILKEEPYSY  173 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC--CCCEEEeeceeeeecCCCce--eeccCCCCCccCHHHHccCCCCC
Confidence            345679999999999999999999999999985  45699999999876543221  12235678999999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+||+||++|+|++|..||.+.
T Consensus       174 ~~DvwslGv~l~el~~g~~p~~~~  197 (277)
T cd05607         174 PVDWFAMGCSIYEMVAGRTPFKDH  197 (277)
T ss_pred             chhHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999653


No 196
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.95  E-value=3.8e-28  Score=267.15  Aligned_cols=94  Identities=23%  Similarity=0.439  Sum_probs=76.4

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCC-Ccccch
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPS-TTASNI  671 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~  671 (1310)
                      ++++|+++..|.+|.||+|.+|..+. +++.+|.|++...+....+...|+..+++| +|++|..+++.|.-. ....+.
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKK-NGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECC-CCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            67899999999999999998876654 788999999887766667788899999999 699999999877422 123467


Q ss_pred             hhHHHHhhcCchhhhhh
Q psy5279         672 AVLVMEKLQGADVLSYL  688 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~  688 (1310)
                      ..||||++.|..+..++
T Consensus        95 ~~lv~e~~~~~~L~~~l  111 (286)
T cd06638          95 LWLVLELCNGGSVTDLV  111 (286)
T ss_pred             EEEEEeecCCCCHHHHH
Confidence            88999999998775544


No 197
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.95  E-value=1.6e-27  Score=264.54  Aligned_cols=163  Identities=26%  Similarity=0.407  Sum_probs=138.1

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      |++.+.||+|+||.||+|.++.+|+.||+|.+.....   .....+.+|+.+|++++||||++++++|.+.+.+++||||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            6788999999999999999999999999999875422   2234577899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ++||+|...+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.......
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~  159 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG--HIRISDLGLAVQIPEGETVR  159 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEeeCCCcEEcCCCCeec
Confidence            9999998777543  3589999999999999999999999999999999999998655  79999999998765433333


Q ss_pred             CcccchHHHh
Q psy5279         340 PLEYDVRYVR  349 (1310)
Q Consensus       340 ~~~~t~~yv~  349 (1310)
                      ...+|+.|++
T Consensus       160 ~~~g~~~y~a  169 (285)
T cd05631         160 GRVGTVGYMA  169 (285)
T ss_pred             CCCCCCCccC
Confidence            3445555544


No 198
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.95  E-value=1.7e-27  Score=275.99  Aligned_cols=166  Identities=24%  Similarity=0.406  Sum_probs=142.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.|++.+.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.+|+.++||||+++++++.+++.+|+|
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv  121 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV  121 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence            467999999999999999999999999999999997432   12334577899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC-
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK-  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~-  337 (1310)
                      ||||+||+|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.....+. 
T Consensus       122 ~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~~kL~DfG~~~~~~~~~~~  198 (370)
T cd05596         122 MEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMDANGMV  198 (370)
T ss_pred             EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--CEEEEeccceeeccCCCcc
Confidence            999999999988764 4589999999999999999999999999999999999998655  899999999987754332 


Q ss_pred             -CCCcccchHHHhh
Q psy5279         338 -LNPLEYDVRYVRQ  350 (1310)
Q Consensus       338 -l~~~~~t~~yv~~  350 (1310)
                       ....+||+.|+++
T Consensus       199 ~~~~~~gt~~y~aP  212 (370)
T cd05596         199 RCDTAVGTPDYISP  212 (370)
T ss_pred             cCCCCCCCcCeECH
Confidence             2345667666654


No 199
>KOG0579|consensus
Probab=99.95  E-value=7.3e-28  Score=281.02  Aligned_cols=87  Identities=34%  Similarity=0.445  Sum_probs=77.4

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeeccc-CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      .|.|-+..|-|+--|-||-|.||..| .|.-+.|||.++- +.+.|....-|.+.|.+..||+|..|+.||--.    |-
T Consensus        29 nP~d~WeIiGELGDGAFGKVyKA~nk-et~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e----nk  103 (1187)
T KOG0579|consen   29 NPRDHWEIIGELGDGAFGKVYKAVNK-ETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE----NK  103 (1187)
T ss_pred             CHHHHHHHHhhhcCccchhhhhhhcc-cchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc----Cc
Confidence            36788899999999999999999999 5999999999986 567788899999999999999999999999877    66


Q ss_pred             hhHHHHhhcCchh
Q psy5279         672 AVLVMEKLQGADV  684 (1310)
Q Consensus       672 ~~~~~~~~~~~~~  684 (1310)
                      +-++.|||.|.-|
T Consensus       104 LwiliEFC~GGAV  116 (1187)
T KOG0579|consen  104 LWILIEFCGGGAV  116 (1187)
T ss_pred             eEEEEeecCCchH
Confidence            7778899998754


No 200
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.95  E-value=6.8e-28  Score=267.11  Aligned_cols=104  Identities=26%  Similarity=0.369  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys~ 1028 (1310)
                      .++.||++||.|||++||+|+||||+|||++.  ++.+||+|||++......... .....+++.|+|||.+.+ ..++.
T Consensus       106 ~~~~qi~~al~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~  182 (298)
T cd07841         106 SYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS--DGVLKLADFGLARSFGSPNRK-MTHQVVTRWYRAPELLFGARHYGV  182 (298)
T ss_pred             HHHHHHHHHHHHHHhCCeeecCCChhhEEEcC--CCCEEEccceeeeeccCCCcc-ccccccceeeeCHHHHhCCCCCCc
Confidence            35679999999999999999999999999986  457999999998765432211 122234678999999865 45788


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|+|||||++|+|++|.+||.+.+..+
T Consensus       183 ~~Dv~slG~il~e~~~g~~~~~~~~~~~  210 (298)
T cd07841         183 GVDMWSVGCIFAELLLRVPFLPGDSDID  210 (298)
T ss_pred             HHHHHHHHHHHHHHHcCCccccCCccHH
Confidence            9999999999999999998998765433


No 201
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.95  E-value=4.2e-27  Score=266.38  Aligned_cols=166  Identities=27%  Similarity=0.435  Sum_probs=143.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|.+.+.||+|+||.||+|.++.+|+.||+|+++....   .....+.+|+.+|+.++||||+++++++...+.+||||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            368999999999999999999999999999999975422   23456788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++||+|.+.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+......
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~  158 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--HIKLADFGSAARLTANKMV  158 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC--CEEeccCCCCeECCCCCce
Confidence            999999999998775 5799999999999999999999999999999999999998655  7999999999877543322


Q ss_pred             --CCcccchHHHhh
Q psy5279         339 --NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 --~~~~~t~~yv~~  350 (1310)
                        ...++|+.|+++
T Consensus       159 ~~~~~~gt~~y~aP  172 (330)
T cd05601         159 NSKLPVGTPDYIAP  172 (330)
T ss_pred             eeecccCCccccCH
Confidence              223556666554


No 202
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.95  E-value=4.2e-28  Score=267.90  Aligned_cols=102  Identities=23%  Similarity=0.434  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......+++.|+|||++.+ ..++
T Consensus       106 ~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  182 (291)
T cd07844         106 RLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISE--RGELKLADFGLARAKSVPSK-TYSNEVVTLWYRPPDVLLGSTEYS  182 (291)
T ss_pred             HHHHHHHHHHHHHHHhCCeecccCCHHHEEEcC--CCCEEECccccccccCCCCc-cccccccccccCCcHHhhcCcccC
Confidence            345679999999999999999999999999986  45699999998865322111 1111234678999999876 4588


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++||||+||++|+|++|..||.+..
T Consensus       183 ~~~Dv~slG~il~~l~~g~~~~~~~~  208 (291)
T cd07844         183 TSLDMWGVGCIFYEMATGRPLFPGST  208 (291)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            89999999999999999999997654


No 203
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.95  E-value=4.4e-28  Score=268.16  Aligned_cols=95  Identities=24%  Similarity=0.428  Sum_probs=78.0

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCCc-ccc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPSTT-ASN  670 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~  670 (1310)
                      .+++.|+++..|..|.||+|.+|..+. ++..+|.|.+........++..|+..+++| .|++|..+++.+..... ..+
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   97 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKK-DGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG   97 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECC-CCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence            357889999999999999998876554 788899999988777778888999999999 89999999988865432 234


Q ss_pred             hhhHHHHhhcCchhhhhh
Q psy5279         671 IAVLVMEKLQGADVLSYL  688 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~  688 (1310)
                      ...+|||++.|.++..++
T Consensus        98 ~~~lv~ey~~~~sL~~~~  115 (291)
T cd06639          98 QLWLVLELCNGGSVTELV  115 (291)
T ss_pred             eeEEEEEECCCCcHHHHH
Confidence            578999999998765544


No 204
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.95  E-value=3.7e-27  Score=268.04  Aligned_cols=159  Identities=23%  Similarity=0.366  Sum_probs=136.4

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.++.+++.||+|++++..   ......+.+|+.+++.+ +||||++++++|.+.+.+|||||||+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46999999999999999999999999997532   22345577899999998 799999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CCCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~~~l~~~~~  343 (1310)
                      |+|...+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++... ........+|
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMCKEGIRPGDTTSTFCG  158 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEECcCccccccccCCCccccccC
Confidence            99999888777899999999999999999999999999999999999998655  79999999998532 2223334566


Q ss_pred             chHHHh
Q psy5279         344 DVRYVR  349 (1310)
Q Consensus       344 t~~yv~  349 (1310)
                      |+.|++
T Consensus       159 t~~y~a  164 (329)
T cd05588         159 TPNYIA  164 (329)
T ss_pred             CccccC
Confidence            665554


No 205
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95  E-value=1.3e-27  Score=269.42  Aligned_cols=107  Identities=25%  Similarity=0.432  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEE-P 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~-~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.++|+|||++........  .......+++.|+|||++.+. .
T Consensus       106 ~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~--~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  183 (330)
T cd07834         106 QYFLYQILRGLKYLHSANVIHRDLKPSNILVNS--NCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSR  183 (330)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEcccCceEeecccccccccccccccccCcCCceeeecccC
Confidence            445679999999999999999999999999986  46799999999876543221  111223457889999999888 7


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++.++|+|||||++|+|++|.+||.+.+..+.
T Consensus       184 ~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~  215 (330)
T cd07834         184 YTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ  215 (330)
T ss_pred             CCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence            88999999999999999999999988775544


No 206
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.95  E-value=7.7e-28  Score=266.92  Aligned_cols=107  Identities=19%  Similarity=0.319  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc----------ccCCCCCCcccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI----------HPINTPNPEFAA 1017 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~----------~~~~tGtp~Y~A 1017 (1310)
                      +..++.||++||.|||++||+||||||+|||++.  +..+||+|||++..........          .....+++.|+|
T Consensus       117 ~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  194 (311)
T cd07866         117 IKCYMLQLLEGINYLHENHILHRDIKAANILIDN--QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRP  194 (311)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCC
Confidence            3456779999999999999999999999999986  4579999999986543211100          011234678999


Q ss_pred             cccccCC-CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1018 PEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1018 PEvl~~~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ||.+.+. .++.++|+|||||++|+|++|.+||.+.+...
T Consensus       195 PE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~  234 (311)
T cd07866         195 PELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID  234 (311)
T ss_pred             hHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9988654 57889999999999999999999998876544


No 207
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.95  E-value=1.8e-27  Score=269.56  Aligned_cols=160  Identities=25%  Similarity=0.364  Sum_probs=136.6

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.++..+ +||||++++++|...+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999997531   22344567888888876 699999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~  343 (1310)
                      |+|...+.+...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ......+|
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~--~~kL~DfG~~~~~~~~~~~~~~~~g  158 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGIFNGKTTSTFCG  158 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeeCCCCeecCcCCCccccccc
Confidence            99999988877899999999999999999999999999999999999998665  7999999999864322 23344566


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (320)
T cd05590         159 TPDYIAP  165 (320)
T ss_pred             CccccCH
Confidence            7766654


No 208
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.94  E-value=2.5e-28  Score=308.64  Aligned_cols=93  Identities=20%  Similarity=0.360  Sum_probs=77.5

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc---chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH---DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      ..+.|.++..|-+|.||.|..|..+. ++..+|.|++.+..   ....++..|+..|+.|+|++|..+++.|....  ..
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~-tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~--~~   87 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKR-TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA--NQ   87 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECC-CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC--CC
Confidence            45789999999999999999988776 88899999998653   34566788999999999999999999885432  24


Q ss_pred             hhhHHHHhhcCchhhhhhh
Q psy5279         671 IAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~  689 (1310)
                      ...||||||.|.++..+|.
T Consensus        88 ~lyIVMEY~~gGSL~~lL~  106 (1021)
T PTZ00266         88 KLYILMEFCDAGDLSRNIQ  106 (1021)
T ss_pred             EEEEEEeCCCCCcHHHHHH
Confidence            6778999999998877663


No 209
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.94  E-value=7.8e-28  Score=273.32  Aligned_cols=104  Identities=22%  Similarity=0.442  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc--ccCCCCCCcccccccccC-CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI--HPINTPNPEFAAPEVLAE-EP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~--~~~~tGtp~Y~APEvl~~-~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ...+||+|||++..........  .....+++.|+|||++.+ ..
T Consensus       109 ~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (336)
T cd07849         109 QYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--NCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKG  186 (336)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCC
Confidence            445679999999999999999999999999975  4569999999987653221111  112346789999998765 46


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++.++|+||+||++|+|++|++||.+.+.
T Consensus       187 ~~~~~DvwslGvil~el~~G~~~f~~~~~  215 (336)
T cd07849         187 YTKAIDIWSVGCILAEMLSNRPLFPGKDY  215 (336)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            88899999999999999999999987653


No 210
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94  E-value=1.8e-27  Score=271.70  Aligned_cols=102  Identities=25%  Similarity=0.514  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  ++.+||+|||++......    .....+++.|+|||++.+. .++
T Consensus       121 ~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~  194 (343)
T cd07851         121 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYN  194 (343)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEcccccccccccc----ccCCcccccccCHHHHhCCCCCC
Confidence            445679999999999999999999999999986  456999999998754322    1122456889999998653 678


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++|+|||||++|+|++|..||.+.+...
T Consensus       195 ~~~DvwslGv~l~elltg~~pf~~~~~~~  223 (343)
T cd07851         195 QTVDIWSVGCIMAELLTGKTLFPGSDHID  223 (343)
T ss_pred             chHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            89999999999999999999998765443


No 211
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.94  E-value=6.1e-27  Score=264.03  Aligned_cols=147  Identities=22%  Similarity=0.386  Sum_probs=129.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----eEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----SFT  256 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----~ly  256 (1310)
                      +|++.+.||+|+||.||+|+++.+|+.||||++....  ......+.+|+.+|+.++||||+++++++...+     .+|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            5899999999999999999999999999999986432  223345789999999999999999999886543     589


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +|||||. ++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~kL~Dfg~~~~~~  154 (338)
T cd07859          81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KLKICDFGLARVAF  154 (338)
T ss_pred             EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cEEEccCccccccc
Confidence            9999996 68888888777899999999999999999999999999999999999998655  79999999998653


No 212
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.94  E-value=2.7e-27  Score=267.95  Aligned_cols=165  Identities=20%  Similarity=0.326  Sum_probs=139.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCC-CcceEEEEEEeCCeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHR-NLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HP-NIVkL~d~f~~~~~lyLVm  259 (1310)
                      .|++.+.||+|+||.||+|.+..+++.||+|++.+..   ....+.+..|+.++..+.|+ +|++++++|...+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4789999999999999999999999999999997532   23345577899999999765 5889999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l  338 (1310)
                      ||++||+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... ....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG--HIKIADFGMCKENIFGGKTT  158 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC--CEEEeecCcceecCCCCCce
Confidence            9999999999998877899999999999999999999999999999999999998655  799999999975422 2223


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      ...+||+.|+++
T Consensus       159 ~~~~gt~~y~aP  170 (324)
T cd05587         159 RTFCGTPDYIAP  170 (324)
T ss_pred             eeecCCccccCh
Confidence            344566555543


No 213
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.94  E-value=8.9e-28  Score=265.97  Aligned_cols=106  Identities=22%  Similarity=0.294  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC-CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-IF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-ys 1027 (1310)
                      ..++.||+.||+|||++||+|+||||+|||++.  .+.+||+|||++......... .....+++.|+|||.+.+.. ++
T Consensus       109 ~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  185 (293)
T cd07843         109 KCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN--RGILKICDFGLAREYGSPLKP-YTQLVVTLWYRAPELLLGAKEYS  185 (293)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC--CCcEEEeecCceeeccCCccc-cccccccccccCchhhcCCcccc
Confidence            445679999999999999999999999999986  456999999998765432111 11223568899999987654 67


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|+|||||++|+|++|.+||.+.+....
T Consensus       186 ~~~Di~slG~~l~~l~~g~~~f~~~~~~~~  215 (293)
T cd07843         186 TAIDMWSVGCIFAELLTKKPLFPGKSEIDQ  215 (293)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            899999999999999999999987765443


No 214
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94  E-value=1.1e-27  Score=264.76  Aligned_cols=107  Identities=22%  Similarity=0.316  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+||+++. ....+||+|||++......... .....+++.|+|||++.+ ..+
T Consensus       112 ~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~  189 (295)
T cd07837         112 IKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-QKGLLKIADLGLGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHY  189 (295)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec-CCCeEEEeecccceecCCCccc-cCCcccccCCCChHHhhCCCCC
Confidence            3456779999999999999999999999999985 2457999999998754321111 112235688999999865 457


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      +.++|+|||||++|+|++|..||.+.+..+
T Consensus       190 ~~~~Di~slG~~l~~l~~g~~~~~~~~~~~  219 (295)
T cd07837         190 STPVDIWSVGCIFAEMSRKQPLFPGDSELQ  219 (295)
T ss_pred             CchHHHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            889999999999999999999998865543


No 215
>KOG4236|consensus
Probab=99.94  E-value=6.3e-28  Score=277.99  Aligned_cols=164  Identities=27%  Similarity=0.493  Sum_probs=128.1

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-CCCcEEEEeeccceeeccCCcccccCCCCCCcccccccc
Q psy5279         943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL 1021 (1310)
Q Consensus       943 ~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl 1021 (1310)
                      ..+..-.+++.||+.||.|||.+||||+||||||||+.+. ...++||||||+|+.+....-  .....|||.|.|||++
T Consensus       661 L~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF--RrsVVGTPAYLaPEVL  738 (888)
T KOG4236|consen  661 LPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF--RRSVVGTPAYLAPEVL  738 (888)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh--hhhhcCCccccCHHHH
Confidence            3455678899999999999999999999999999999874 346899999999998765332  2233567888888776


Q ss_pred             cCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhC
Q psy5279        1022 AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNID 1101 (1310)
Q Consensus      1022 ~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~ 1101 (1310)
                      ..++                                                                            
T Consensus       739 rnkG----------------------------------------------------------------------------  742 (888)
T KOG4236|consen  739 RNKG----------------------------------------------------------------------------  742 (888)
T ss_pred             hhcc----------------------------------------------------------------------------
Confidence            5544                                                                            


Q ss_pred             CCcccccccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCCh
Q psy5279        1102 HEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1181 (1310)
Q Consensus      1102 H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~ 1181 (1310)
                                                                         |....|+||+|||+|+-|+|..||.-+  
T Consensus       743 ---------------------------------------------------yNrSLDMWSVGVIiYVsLSGTFPFNEd--  769 (888)
T KOG4236|consen  743 ---------------------------------------------------YNRSLDMWSVGVIIYVSLSGTFPFNED--  769 (888)
T ss_pred             ---------------------------------------------------ccccccceeeeEEEEEEecccccCCCc--
Confidence                                                               444557777777777777777777432  


Q ss_pred             hhhhhcccccccccc-cchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCCch
Q psy5279        1182 PETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237 (1310)
Q Consensus      1182 ~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~~~ 1237 (1310)
                      +++-..|..+.+.|| ..|++||++|.|||..||++.-++|.|++++|.|||++.-+
T Consensus       770 EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq  826 (888)
T KOG4236|consen  770 EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ  826 (888)
T ss_pred             cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence            223344556666775 67999999999999999999999999999999999998654


No 216
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.94  E-value=8.1e-27  Score=264.27  Aligned_cols=165  Identities=24%  Similarity=0.457  Sum_probs=140.4

Q ss_pred             CeeeeceecccCceEEEEEEEc---CCCcEEEEEEEecCC----cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVER---SSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k---~Tg~~vAIKiI~~~~----~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~l  255 (1310)
                      .|++.+.||+|+||+||+|.+.   .+|+.||+|++.+..    ....+.+.+|+.+|+.+ +||||++++++|..++.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4889999999999999998764   589999999986432    12334577899999999 599999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |+||||++||+|.+.+.....+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.....
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~--~~kl~DfG~~~~~~~~  158 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG--HVVLTDFGLSKEFLSE  158 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC--CEEEeeCcCCcccccc
Confidence            99999999999999998877899999999999999999999999999999999999998665  7999999999875432


Q ss_pred             C--CCCCcccchHHHhh
Q psy5279         336 G--KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       336 ~--~l~~~~~t~~yv~~  350 (1310)
                      .  .....+||+.|+++
T Consensus       159 ~~~~~~~~~gt~~y~aP  175 (332)
T cd05614         159 EKERTYSFCGTIEYMAP  175 (332)
T ss_pred             CCCccccccCCccccCH
Confidence            2  22335667666654


No 217
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.94  E-value=4.8e-27  Score=272.56  Aligned_cols=168  Identities=23%  Similarity=0.373  Sum_probs=144.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      -.+.|++.+.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.+|+.++||||+++++++.+.+.+|+
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM  120 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            3478999999999999999999999999999999996432   1234457789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||||+||+|.+.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+...+.
T Consensus       121 v~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~--~ikL~DfG~a~~~~~~~~  197 (371)
T cd05622         121 VMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGM  197 (371)
T ss_pred             EEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC--CEEEEeCCceeEcCcCCc
Confidence            9999999999988865 4589999999999999999999999999999999999998655  799999999998754332


Q ss_pred             --CCCcccchHHHhhh
Q psy5279         338 --LNPLEYDVRYVRQA  351 (1310)
Q Consensus       338 --l~~~~~t~~yv~~~  351 (1310)
                        ....+||+.|+++.
T Consensus       198 ~~~~~~~gt~~y~aPE  213 (371)
T cd05622         198 VRCDTAVGTPDYISPE  213 (371)
T ss_pred             ccccCcccCccccCHH
Confidence              23456777776653


No 218
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.94  E-value=2.6e-27  Score=268.30  Aligned_cols=160  Identities=26%  Similarity=0.440  Sum_probs=136.4

Q ss_pred             ceecccCceEEEEEEEc---CCCcEEEEEEEecCC----cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         189 DELGRGVTGIVYHAVER---SSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k---~Tg~~vAIKiI~~~~----~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.||+|+||.||+|.+.   .+++.||+|++....    ......+.+|+.+|+.++||||++++++|..++.+|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            67999999999999864   578999999997531    12334567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCCC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLNP  340 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~~  340 (1310)
                      ++||+|.+.+.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.....+ ....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~  159 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG--HVKLTDFGLCKESIHEGTVTHT  159 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEeeCcCCeecccCCCcccc
Confidence            99999999998888899999999999999999999999999999999999998655  79999999998643322 3334


Q ss_pred             cccchHHHhh
Q psy5279         341 LEYDVRYVRQ  350 (1310)
Q Consensus       341 ~~~t~~yv~~  350 (1310)
                      .++|+.|+++
T Consensus       160 ~~gt~~y~aP  169 (323)
T cd05584         160 FCGTIEYMAP  169 (323)
T ss_pred             cCCCccccCh
Confidence            5667666554


No 219
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94  E-value=2.2e-27  Score=256.24  Aligned_cols=102  Identities=22%  Similarity=0.410  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++||+||||||+||+++.  ...++|+|||++........ ......+++.|+|||++.+..++.
T Consensus       105 ~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~--~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  181 (257)
T cd08223         105 VEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR--TNIIKVGDLGIARVLENQCD-MASTLIGTPYYMSPELFSNKPYNY  181 (257)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCchhEEEec--CCcEEEecccceEEecccCC-ccccccCCcCccChhHhcCCCCCc
Confidence            345679999999999999999999999999975  45799999999876533221 122335678999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||.+.+
T Consensus       182 ~~Dv~slG~il~~l~~g~~~~~~~~  206 (257)
T cd08223         182 KSDVWALGCCVYEMATLKHAFNAKD  206 (257)
T ss_pred             hhhhHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999999999999999997543


No 220
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.94  E-value=7.8e-28  Score=264.55  Aligned_cols=96  Identities=21%  Similarity=0.351  Sum_probs=79.1

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCC--ccc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPST--TAS  669 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~  669 (1310)
                      +|...|++...|..|.||.|.+|..+ +++..+|.|+++.......+...|...++.+ +|++|..+++.+....  ...
T Consensus        13 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   91 (282)
T cd06636          13 DPAGIFELVEVVGNGTYGQVYKGRHV-KTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD   91 (282)
T ss_pred             ChhhhhhhheeeccCCCeEEEEEEEc-CCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence            46678999999999999999987665 4788999999999887777888899999998 6999999998875432  234


Q ss_pred             chhhHHHHhhcCchhhhhhh
Q psy5279         670 NIAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       670 ~~~~~~~~~~~~~~~~~~~~  689 (1310)
                      +...+|||++.|.++..++.
T Consensus        92 ~~~~iv~e~~~~~~L~~~~~  111 (282)
T cd06636          92 DQLWLVMEFCGAGSVTDLVK  111 (282)
T ss_pred             CEEEEEEEeCCCCcHHHHHH
Confidence            67789999999988766553


No 221
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.94  E-value=1.5e-27  Score=262.12  Aligned_cols=99  Identities=29%  Similarity=0.460  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++|++|+||+|+||+++.  +..+||+|||++........ ......++..|+|||.+.+..++.+
T Consensus       105 ~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  181 (277)
T cd06642         105 TILREILKGLDYLHSERKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSAYDFK  181 (277)
T ss_pred             HHHHHHHHHHHHHhcCCeeccCCChheEEEeC--CCCEEEccccccccccCcch-hhhcccCcccccCHHHhCcCCCchh
Confidence            34569999999999999999999999999975  45699999999876543211 1122345688999999999889999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +|+|||||++|+|++|..||..
T Consensus       182 ~Dv~slG~il~el~tg~~p~~~  203 (277)
T cd06642         182 ADIWSLGITAIELAKGEPPNSD  203 (277)
T ss_pred             hhHHHHHHHHHHHHhCCCCCcc
Confidence            9999999999999999999854


No 222
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.94  E-value=1.2e-26  Score=264.05  Aligned_cols=164  Identities=23%  Similarity=0.436  Sum_probs=140.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.+++.++||||++++++|.+++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            46899999999999999999999999999999997421   223445788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++||+|.+.+.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+...+..
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~  158 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG--HIRLADFGSCLRLLADGTV  158 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC--CEEEEECCceeecCCCCCc
Confidence            99999999999876 35699999999999999999999999999999999999997655  7999999999876543322


Q ss_pred             C--CcccchHHH
Q psy5279         339 N--PLEYDVRYV  348 (1310)
Q Consensus       339 ~--~~~~t~~yv  348 (1310)
                      .  ..++|+.|+
T Consensus       159 ~~~~~~gt~~y~  170 (331)
T cd05597         159 QSNVAVGTPDYI  170 (331)
T ss_pred             cccceecccccc
Confidence            1  234555544


No 223
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.94  E-value=4.5e-27  Score=267.52  Aligned_cols=165  Identities=21%  Similarity=0.387  Sum_probs=141.3

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||.||++.++.+++.||+|++.+..   ......+.+|+.++..++||||+++++++.+++.+||||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47899999999999999999999999999999986532   123345778999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++||+|.+.+.. ...+++..++.++.|++.||+|||++||+||||||+|||++.++  .+||+|||+|+.+......
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~  158 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG--HIRLADFGSCLKMNQDGTV  158 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC--CEEEEeccceeeccCCCce
Confidence            99999999999976 45699999999999999999999999999999999999998655  7999999999877544322


Q ss_pred             --CCcccchHHHh
Q psy5279         339 --NPLEYDVRYVR  349 (1310)
Q Consensus       339 --~~~~~t~~yv~  349 (1310)
                        ...+||+.|++
T Consensus       159 ~~~~~~gt~~y~a  171 (331)
T cd05624         159 QSSVAVGTPDYIS  171 (331)
T ss_pred             eeccccCCcccCC
Confidence              22345555543


No 224
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.94  E-value=4.8e-27  Score=265.85  Aligned_cols=160  Identities=29%  Similarity=0.479  Sum_probs=134.7

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHH-HHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELD-IMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~-IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+|+.||+|++.+...   .....+.+|.. +++.++|||||++++++...+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            469999999999999999999999999975321   22233445554 56889999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGLCKEGIEHSKTTSTFCG  158 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeccCCCcccccCCCccccccC
Confidence            99999998877899999999999999999999999999999999999998655  799999999986432 223345567


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (323)
T cd05575         159 TPEYLAP  165 (323)
T ss_pred             ChhhcCh
Confidence            7777654


No 225
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.94  E-value=8.9e-28  Score=261.64  Aligned_cols=100  Identities=30%  Similarity=0.464  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.|++.||+|||++||+||||||+||+++.  +..+||+|||++........ ......+++.|+|||.+.   ...
T Consensus       109 ~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~  185 (267)
T cd06646         109 AYVCRETLQGLAYLHSKGKMHRDIKGANILLTD--NGDVKLADFGVAAKITATIA-KRKSFIGTPYWMAPEVAAVEKNGG  185 (267)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEECcCccceeeccccc-ccCccccCccccCHhHcccccCCC
Confidence            345679999999999999999999999999975  45699999999876532211 112234678999999985   345


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++.++|+||+||++|+|++|..||..
T Consensus       186 ~~~~~Dvws~G~il~el~~g~~p~~~  211 (267)
T cd06646         186 YNQLCDIWAVGITAIELAELQPPMFD  211 (267)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCccc
Confidence            77899999999999999999999854


No 226
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.94  E-value=1.6e-27  Score=265.44  Aligned_cols=108  Identities=22%  Similarity=0.299  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec--CCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV--RSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~--~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.+  ..+.+||+|||++........  .......+++.|+|||++.+
T Consensus       110 ~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (316)
T cd07842         110 VKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLG  189 (316)
T ss_pred             HHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhC
Confidence            34567899999999999999999999999999752  146799999999875432221  11112245688999998876


Q ss_pred             C-CCCCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1024 E-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1024 ~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      . .++.++|+|||||++|+|++|.+||.+....
T Consensus       190 ~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~  222 (316)
T cd07842         190 ARHYTKAIDIWAIGCIFAELLTLEPIFKGREAK  222 (316)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccc
Confidence            4 5788999999999999999999999876543


No 227
>KOG1290|consensus
Probab=99.94  E-value=9.6e-26  Score=260.31  Aligned_cols=134  Identities=25%  Similarity=0.423  Sum_probs=116.1

Q ss_pred             ccC-CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-----CC---CcceEEEEEE
Q psy5279         180 PIT-DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-----HR---NLVRLHDSYE  250 (1310)
Q Consensus       180 ~~~-d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-----HP---NIVkL~d~f~  250 (1310)
                      .|. .+|.+.++||=|.|++||+|.+..+.+-||+|+++.. ....+....||.+|+++.     |+   .||+|++.|.
T Consensus        74 ~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk  152 (590)
T KOG1290|consen   74 VFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK  152 (590)
T ss_pred             cccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence            577 8999999999999999999999999999999998633 356677789999999983     44   4999999998


Q ss_pred             eC----CeEEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeec
Q psy5279         251 TK----DSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAH  315 (1310)
Q Consensus       251 ~~----~~lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~  315 (1310)
                      ..    ..++||+|++. ..|+..|....  .++-..++.|++|||.||+|||. .||||-||||||||+..
T Consensus       153 hsGpNG~HVCMVfEvLG-dnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  153 HSGPNGQHVCMVFEVLG-DNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS  223 (590)
T ss_pred             ecCCCCcEEEEEehhhh-hHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence            65    47999999984 57888887653  48999999999999999999995 69999999999999964


No 228
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.94  E-value=9.6e-28  Score=265.81  Aligned_cols=104  Identities=22%  Similarity=0.371  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.||+.||+|||++||+||||||+||+++.. ...+||+|||++........ ......+++.|+|||++.+. .++.
T Consensus       106 ~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~-~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~  183 (294)
T PLN00009        106 TYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRR-TNALKLADFGLARAFGIPVR-TFTHEVVTLWYRAPEILLGSRHYST  183 (294)
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCcceEEEECC-CCEEEEcccccccccCCCcc-ccccCceeecccCHHHHhCCCCCCc
Confidence            456799999999999999999999999999742 34689999999865432111 11122346889999998764 5788


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      ++|+||+||++|+|++|.+||.+.+..
T Consensus       184 ~~Dv~slG~i~~~l~tg~~pf~~~~~~  210 (294)
T PLN00009        184 PVDIWSVGCIFAEMVNQKPLFPGDSEI  210 (294)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999999876543


No 229
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.94  E-value=7.8e-28  Score=260.19  Aligned_cols=102  Identities=30%  Similarity=0.523  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccCC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAEE- 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~~- 1024 (1310)
                      ..++.|++.||.|||++||+||||||+||+++.  +..+||+|||++.........   ......+++.|+|||++... 
T Consensus       105 ~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~  182 (267)
T cd06610         105 ATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE--DGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVH  182 (267)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEEcccchHHHhccCccccccccccccCChhhcChHHHcccc
Confidence            345679999999999999999999999999986  456999999988655432211   11223467889999999877 


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++.++|+|||||++|+|++|..||...
T Consensus       183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~  210 (267)
T cd06610         183 GYDFKADIWSFGITAIELATGAAPYSKY  210 (267)
T ss_pred             CcCcccchHhHhHHHHHHHhCCCCcccc
Confidence            7889999999999999999999999654


No 230
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.94  E-value=3.2e-27  Score=267.03  Aligned_cols=160  Identities=24%  Similarity=0.337  Sum_probs=137.0

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++.+..   ......+..|+.+|..+ +||||++++++|.+++.+||||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            46999999999999999999999999997532   22344567899999876 899999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ......++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG--HCKLADFGMCKEGILNGVTTTTFCG  158 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeecccceecccCCcccccccc
Confidence            99999998877899999999999999999999999999999999999998665  7999999999865332 23344566


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (321)
T cd05591         159 TPDYIAP  165 (321)
T ss_pred             CccccCH
Confidence            7766654


No 231
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.94  E-value=3.5e-27  Score=266.01  Aligned_cols=161  Identities=30%  Similarity=0.505  Sum_probs=138.6

Q ss_pred             ceecccCceEEEEEEE---cCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCC
Q psy5279         189 DELGRGVTGIVYHAVE---RSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAG  263 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~---k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~  263 (1310)
                      +.||+|+||.||++.+   +.+|+.||+|++.....  .....+.+|+.+|++++||||++++++|.+++.+|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999876   46899999999975322  233456789999999999999999999999999999999999


Q ss_pred             CCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCcc
Q psy5279         264 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLE  342 (1310)
Q Consensus       264 GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~  342 (1310)
                      ||+|.+.+.+...+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ......+
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~  159 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLSKESIDHEKKAYSFC  159 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC--cEEEeeccCCcccCCCCCceeccc
Confidence            999999998777899999999999999999999999999999999999998655  7999999999876543 2334567


Q ss_pred             cchHHHhhh
Q psy5279         343 YDVRYVRQA  351 (1310)
Q Consensus       343 ~t~~yv~~~  351 (1310)
                      +|+.|+++.
T Consensus       160 g~~~y~aPE  168 (318)
T cd05582         160 GTVEYMAPE  168 (318)
T ss_pred             CChhhcCHH
Confidence            777776653


No 232
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.94  E-value=2.2e-27  Score=257.06  Aligned_cols=101  Identities=28%  Similarity=0.448  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccc--cCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~--~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.|++.||.|||+.||+||||||+||+++.  +..+||+|||+++..........  ....+++.|+|||++.+..++
T Consensus       108 ~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (263)
T cd06625         108 KYTRQILEGVEYLHSNMIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYG  185 (263)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCC
Confidence            34679999999999999999999999999975  45699999999875432211111  123456889999999999899


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|+|||||++|+|++|..||...
T Consensus       186 ~~~Di~slG~il~el~~g~~p~~~~  210 (263)
T cd06625         186 RKADVWSVGCTVVEMLTEKPPWAEF  210 (263)
T ss_pred             chhhhHHHHHHHHHHHhCCCCcccc
Confidence            9999999999999999999999653


No 233
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.94  E-value=1.4e-27  Score=258.91  Aligned_cols=98  Identities=27%  Similarity=0.470  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.|++.||.|||+ .|++|+||||+||+++.  .+.+||+|||.+........   ....+++.|+|||.+.+..++.
T Consensus       104 ~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~  178 (265)
T cd06605         104 KIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS--RGQIKLCDFGVSGQLVNSLA---KTFVGTSSYMAPERIQGNDYSV  178 (265)
T ss_pred             HHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC--CCCEEEeecccchhhHHHHh---hcccCChhccCHHHHcCCCCCc
Confidence            346799999999999 99999999999999986  45699999998765432111   1145668899999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+|||||++|+|++|..||...
T Consensus       179 ~~Dv~slG~~l~~l~~g~~p~~~~  202 (265)
T cd06605         179 KSDIWSLGLSLIELATGRFPYPPE  202 (265)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999999654


No 234
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.94  E-value=2e-27  Score=260.33  Aligned_cols=101  Identities=31%  Similarity=0.496  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++||||+|+||+++.  ++.++|+|||++....... .......+++.|+|||.+.+..++.
T Consensus       101 ~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~  177 (274)
T cd06609         101 AFILREVLLGLEYLHEEGKIHRDIKAANILLSE--EGDVKLADFGVSGQLTSTM-SKRNTFVGTPFWMAPEVIKQSGYDE  177 (274)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEcccccceeecccc-cccccccCCccccChhhhccCCCCc
Confidence            345679999999999999999999999999986  4569999999987664321 1122335668899999999988999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+|||||++|+|++|..||.+.
T Consensus       178 ~sDv~slG~il~~l~tg~~p~~~~  201 (274)
T cd06609         178 KADIWSLGITAIELAKGEPPLSDL  201 (274)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcccC
Confidence            999999999999999999999654


No 235
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.94  E-value=3.2e-27  Score=259.34  Aligned_cols=104  Identities=26%  Similarity=0.497  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.||+.||.|||++||+|+||+|+||+++.  +..+||+|||++......... .....+++.|+|||++.+. .++.
T Consensus       104 ~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~  180 (286)
T cd07846         104 KYLFQILRGIEFCHSHNIIHRDIKPENILVSQ--SGVVKLCDFGFARTLAAPGEV-YTDYVATRWYRAPELLVGDTKYGR  180 (286)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCcEEEEeeeeeeeccCCccc-cCcccceeeccCcHHhccccccCc
Confidence            45679999999999999999999999999975  457999999998765432221 1223456889999998764 4678


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|||||||++|+|++|.+||.+.+..+
T Consensus       181 ~~Dv~slG~~l~el~~g~~~~~~~~~~~  208 (286)
T cd07846         181 AVDIWAVGCLVTEMLTGEPLFPGDSDID  208 (286)
T ss_pred             hHhHHHHHHHHHHHHcCCCCCCCCchHH
Confidence            8999999999999999999998765433


No 236
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.94  E-value=2e-27  Score=260.00  Aligned_cols=104  Identities=24%  Similarity=0.421  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.   ..+||+|||+++........  ....+++.|+|||.+.. ..++
T Consensus       103 ~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~  177 (282)
T cd07831         103 KSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCRGIYSKPPY--TEYISTRWYRAPECLLTDGYYG  177 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCceecccCHHHEEEcC---CCeEEEecccccccccCCCc--CCCCCCcccCChhHhhcCCCCC
Confidence            345679999999999999999999999999986   67999999998765432221  12345689999998754 4567


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|+||+||++|+|++|.+||.+.+..+.
T Consensus       178 ~~~Di~slGv~l~el~~~~~p~~~~~~~~~  207 (282)
T cd07831         178 PKMDIWAVGCVFFEILSLFPLFPGTNELDQ  207 (282)
T ss_pred             cchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence            899999999999999999999988765443


No 237
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.94  E-value=6.1e-27  Score=264.94  Aligned_cols=165  Identities=20%  Similarity=0.312  Sum_probs=141.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .|.+.+.||+|+||.||+|.++.+++.||||++.+...   .....+..|..++..+ +||+|+++++++.+.+.+|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            47889999999999999999999999999999975421   2233456788888877 5899999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l  338 (1310)
                      ||++||+|...+...+.+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++..... ...
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kL~DfG~~~~~~~~~~~~  158 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENMWDGVTT  158 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC--cEEEccCCCceecCCCCCcc
Confidence            9999999999998877899999999999999999999999999999999999998765  7999999999865432 233


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      ...+||+.|+++
T Consensus       159 ~~~~gt~~y~aP  170 (323)
T cd05616         159 KTFCGTPDYIAP  170 (323)
T ss_pred             ccCCCChhhcCH
Confidence            456777777664


No 238
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.94  E-value=6.2e-27  Score=265.15  Aligned_cols=161  Identities=27%  Similarity=0.472  Sum_probs=135.6

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHH-HHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELD-IMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~-IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+|+.||+|++.+..   ......+.+|.. +++.++||||++++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999999999999999997542   122334455654 57789999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~~~~~g  158 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVLTDFGLCKEGIAQSDTTTTFCG  158 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEeecCCcccCCCCCCCcccccC
Confidence            99999988878899999999999999999999999999999999999998765  799999999986432 223345567


Q ss_pred             chHHHhhh
Q psy5279         344 DVRYVRQA  351 (1310)
Q Consensus       344 t~~yv~~~  351 (1310)
                      |+.|+++.
T Consensus       159 t~~y~aPE  166 (325)
T cd05604         159 TPEYLAPE  166 (325)
T ss_pred             ChhhCCHH
Confidence            77776643


No 239
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.94  E-value=1.4e-27  Score=264.78  Aligned_cols=99  Identities=27%  Similarity=0.520  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+|+||+|.|||++.  ++.+||+|||++......    .....+++.|+|||.+.+..++.
T Consensus       104 ~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~  177 (290)
T cd05580         104 RFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS--DGYIKITDFGFAKRVKGR----TYTLCGTPEYLAPEIILSKGYGK  177 (290)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC--CCCEEEeeCCCccccCCC----CCCCCCCccccChhhhcCCCCCc
Confidence            345679999999999999999999999999975  456999999998765432    12235678999999998888889


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||...+
T Consensus       178 ~~Di~slG~il~~l~~g~~p~~~~~  202 (290)
T cd05580         178 AVDWWALGILIYEMLAGYPPFFDDN  202 (290)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999997654


No 240
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.94  E-value=7e-27  Score=267.93  Aligned_cols=161  Identities=29%  Similarity=0.526  Sum_probs=135.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+|+.+|+.++|||||+++++|...+.+|+||||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            55778899999999999999999999999999986543 23456688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCCC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLNP  340 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~~  340 (1310)
                      |.+|+|...    ....+..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+.... ....
T Consensus       154 ~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~~~  227 (353)
T PLN00034        154 MDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK--NVKIADFGVSRILAQTMDPCNS  227 (353)
T ss_pred             CCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEcccccceecccccccccc
Confidence            999998643    2356788889999999999999999999999999999998655  79999999998764322 1223


Q ss_pred             cccchHHHh
Q psy5279         341 LEYDVRYVR  349 (1310)
Q Consensus       341 ~~~t~~yv~  349 (1310)
                      ..||..|++
T Consensus       228 ~~gt~~y~a  236 (353)
T PLN00034        228 SVGTIAYMS  236 (353)
T ss_pred             cccCccccC
Confidence            344544443


No 241
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=1.4e-26  Score=271.11  Aligned_cols=143  Identities=17%  Similarity=0.326  Sum_probs=130.3

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ....|++.+.||+|+||.||+|.+..+++.||+|...      ...+.+|+.+|+.|+|||||+++++|......++|||
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e  163 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP  163 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence            3467999999999999999999999999999999753      2346789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ++. ++|...+.....+++.+++.++.||+.||.|||++|||||||||+|||++.++  .+||+|||+|+..
T Consensus       164 ~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~--~vkL~DFG~a~~~  232 (391)
T PHA03212        164 RYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG--DVCLGDFGAACFP  232 (391)
T ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC--CEEEEeCCccccc
Confidence            996 68888887777899999999999999999999999999999999999998655  7999999999754


No 242
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.94  E-value=1.4e-27  Score=261.93  Aligned_cols=105  Identities=25%  Similarity=0.405  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  +..+||+|||++...............+++.|+|||++.+. .++
T Consensus       103 ~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~  180 (288)
T cd07833         103 RSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE--SGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYG  180 (288)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcC
Confidence            345679999999999999999999999999985  56799999999876543332122223456889999999888 788


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|.+||.+.+..
T Consensus       181 ~~~Dv~slG~~l~~l~~g~~~~~~~~~~  208 (288)
T cd07833         181 KPVDVWAIGCIMAELLDGEPLFPGDSDI  208 (288)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999999876543


No 243
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.94  E-value=1.3e-26  Score=263.72  Aligned_cols=160  Identities=24%  Similarity=0.367  Sum_probs=136.2

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+++.||+|++.+..   ......+.+|+.++.++ +|||||+++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999999999999999997542   22344577899998877 899999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......+|
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~--~~kL~DfG~~~~~~~~~~~~~~~~g  158 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCG  158 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--CEEEeeCCccccccCCCCccccccC
Confidence            99999888777899999999999999999999999999999999999998665  799999999986432 222334556


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (329)
T cd05618         159 TPNYIAP  165 (329)
T ss_pred             CccccCH
Confidence            6655543


No 244
>KOG1035|consensus
Probab=99.94  E-value=2.1e-26  Score=286.16  Aligned_cols=102  Identities=24%  Similarity=0.438  Sum_probs=81.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeec----------c-------CCccccc
Q psy5279         945 THKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----------K-------LGTLIHP 1007 (1310)
Q Consensus       945 ~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~----------~-------~g~~~~~ 1007 (1310)
                      ....-.+|+||++||.|+|++|||||||||.||++++  ...|||+|||+|....          .       .+....+
T Consensus       696 ~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~--~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~T  773 (1351)
T KOG1035|consen  696 RDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDS--RNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLT  773 (1351)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcC--CCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccc
Confidence            3445568999999999999999999999999999996  4569999999987521          0       0111223


Q ss_pred             CCCCCCcccccccccCCC---CCCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1008 INTPNPEFAAPEVLAEEP---IFPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1008 ~~tGtp~Y~APEvl~~~~---ys~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ...||.-|+|||++.+..   |+.|+|+|||||++|||+.   ||..
T Consensus       774 s~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T  817 (1351)
T KOG1035|consen  774 SQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT  817 (1351)
T ss_pred             cccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCc
Confidence            446788999999998765   9999999999999999984   5643


No 245
>KOG0690|consensus
Probab=99.94  E-value=2.5e-27  Score=261.98  Aligned_cols=232  Identities=20%  Similarity=0.348  Sum_probs=183.2

Q ss_pred             ccccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcc
Q psy5279         857 GAADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTST  934 (1310)
Q Consensus       857 ~~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l  934 (1310)
                      +....||||+||+|  +...-++|.--|+.+.+.+  .+||+......++-..-..|+|++..             |+.+
T Consensus       191 at~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~--~HPFLt~LKYsFQt~drlCFVMeyan-------------GGeL  255 (516)
T KOG0690|consen  191 ATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC--RHPFLTSLKYSFQTQDRLCFVMEYAN-------------GGEL  255 (516)
T ss_pred             ccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc--cCcHHHHhhhhhccCceEEEEEEEcc-------------CceE
Confidence            45678999999998  3555555655566555543  37899888877775555556665544             4444


Q ss_pred             cccccc-cCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         935 LCYLPI-VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       935 ~~~L~~-~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                      ..-|.+ .+.++...+++-..|++||.|||+++||.||||.+|+|++.  ++++||+|||+++..-..|. .+..++|||
T Consensus       256 f~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDk--DGHIKitDFGLCKE~I~~g~-t~kTFCGTP  332 (516)
T KOG0690|consen  256 FFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDK--DGHIKITDFGLCKEEIKYGD-TTKTFCGTP  332 (516)
T ss_pred             eeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheecc--CCceEeeecccchhcccccc-eeccccCCh
Confidence            444433 35567778999999999999999999999999999999985  67899999999976433333 234567889


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCC-cc
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHE-VD 1092 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~-~~ 1092 (1310)
                      .|.|||++....|+.++|||.+||++|||++|++||...+...+...|.....+||.   .+|++|+.||..+|+.+ .+
T Consensus       333 EYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr---~ls~eAktLLsGLL~kdP~k  409 (516)
T KOG0690|consen  333 EYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR---TLSPEAKTLLSGLLKKDPKK  409 (516)
T ss_pred             hhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc---cCCHHHHHHHHHHhhcChHh
Confidence            999999999999999999999999999999999999999999999999999999985   78999999999888654 44


Q ss_pred             hh-----cHHhhhCCCcccccc
Q psy5279        1093 WI-----TLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1093 ri-----t~~e~L~H~f~~~~~ 1109 (1310)
                      |.     .+.++..|+||...+
T Consensus       410 RLGgGpdDakEi~~h~FF~~v~  431 (516)
T KOG0690|consen  410 RLGGGPDDAKEIMRHRFFASVD  431 (516)
T ss_pred             hcCCCchhHHHHHhhhhhccCC
Confidence            54     346778898887544


No 246
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.94  E-value=7.4e-28  Score=267.46  Aligned_cols=100  Identities=25%  Similarity=0.482  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++||+||||||+|||++.  ...++|+|||++.........  ....|++.|+|||++.+..++.
T Consensus       105 ~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~  180 (285)
T cd05630         105 VFYAAEICCGLEDLHQERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTI--KGRVGTVGYMAPEVVKNERYTF  180 (285)
T ss_pred             HHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeccceeecCCCccc--cCCCCCccccChHHHcCCCCCC
Confidence            445679999999999999999999999999985  456999999998654322221  1234678999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+||+||++|+|++|..||.+.
T Consensus       181 ~~DiwslG~~l~~l~~g~~Pf~~~  204 (285)
T cd05630         181 SPDWWALGCLLYEMIAGQSPFQQR  204 (285)
T ss_pred             ccccHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999653


No 247
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.94  E-value=1.1e-26  Score=275.84  Aligned_cols=162  Identities=25%  Similarity=0.347  Sum_probs=130.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--------  252 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--------  252 (1310)
                      ....|++.+.||+|+||.||+|.+..+++.||||++....    ....+|+.+|+.++|||||+++++|...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            3467999999999999999999999999999999885432    2345799999999999999999987543        


Q ss_pred             CeEEEEEecCCCCchHHHhh----hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         253 DSFTIISELAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~----~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                      ..+++||||++++ |.+.+.    ....+++..++.++.||+.||+|||++||+||||||+|||++.++ ..+||+|||+
T Consensus       140 ~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~-~~vkL~DFGl  217 (440)
T PTZ00036        140 IFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNT-HTLKLCDFGS  217 (440)
T ss_pred             eEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCC-Cceeeecccc
Confidence            2578999999864 544432    345699999999999999999999999999999999999997543 3699999999


Q ss_pred             ceeecCCCCCCCcccchHHH
Q psy5279         329 SRRITSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       329 Ar~i~~~~~l~~~~~t~~yv  348 (1310)
                      |+.+.........++|+.|+
T Consensus       218 a~~~~~~~~~~~~~~t~~y~  237 (440)
T PTZ00036        218 AKNLLAGQRSVSYICSRFYR  237 (440)
T ss_pred             chhccCCCCcccCCCCcCcc
Confidence            99775543333334444443


No 248
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.94  E-value=2.1e-26  Score=261.80  Aligned_cols=150  Identities=24%  Similarity=0.376  Sum_probs=136.7

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .++|++.+.||+|+||.||+|.+..+|..||+|++.... ......+.+|+.+|++++||||+++++++...+.+++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            478999999999999999999999999999999987542 2345678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |++||+|.+.+.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++  .+||+|||+++.+.
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~  155 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI  155 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--cEEEccCccccccc
Confidence            999999999998777899999999999999999999986 699999999999998665  79999999998664


No 249
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.94  E-value=5.2e-27  Score=265.73  Aligned_cols=161  Identities=29%  Similarity=0.471  Sum_probs=134.6

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHH-HHHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNEL-DIMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI-~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+++.||+|++.+..   ......+.+|. .+++.++||||++++++|...+.+|+||||++|
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46999999999999999999999999997532   11222334444 457889999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.... .......++
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~--~~kl~DfG~a~~~~~~~~~~~~~~g  158 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNGTTSTFCG  158 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEEccCCCCcccccCCCCcccccC
Confidence            99999998877899999999999999999999999999999999999998655  799999999986432 333445667


Q ss_pred             chHHHhhh
Q psy5279         344 DVRYVRQA  351 (1310)
Q Consensus       344 t~~yv~~~  351 (1310)
                      |+.|+++.
T Consensus       159 t~~y~aPE  166 (325)
T cd05602         159 TPEYLAPE  166 (325)
T ss_pred             CccccCHH
Confidence            77776643


No 250
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94  E-value=4e-27  Score=257.28  Aligned_cols=105  Identities=26%  Similarity=0.414  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+|+||||+||+++.  +..+||+|||++......... .....++..|+|||.+.+. .++
T Consensus       101 ~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~  177 (283)
T cd05118         101 KSYLYQLLQGLAFCHSHGILHRDLKPENLLINT--EGVLKLADFGLARSFGSPVRP-YTHYVVTRWYRAPELLLGDKGYS  177 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC--CCcEEEeeeeeeEecCCCccc-ccCccCcccccCcHHHhcCCCCC
Confidence            445779999999999999999999999999985  456999999998765433211 1123456789999999877 788


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++|+||+||++|+|++|+.||.+.+..+
T Consensus       178 ~~~Di~slG~~l~~l~tg~~~~~~~~~~~  206 (283)
T cd05118         178 TPVDIWSVGCIFAELLSRRPLFPGKSEID  206 (283)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            89999999999999999999998776543


No 251
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.94  E-value=1.9e-27  Score=269.40  Aligned_cols=106  Identities=25%  Similarity=0.373  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC-------------cccccCCCCCCcc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-------------TLIHPINTPNPEF 1015 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-------------~~~~~~~tGtp~Y 1015 (1310)
                      ..++.||+.||+|||++||+|+||||+|||++.  ...+||+|||++......+             ........+++.|
T Consensus       122 ~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y  199 (335)
T PTZ00024        122 KCILLQILNGLNVLHKWYFMHRDLSPANIFINS--KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWY  199 (335)
T ss_pred             HHHHHHHHHHHHHHHhCCeecccccHHHeEECC--CCCEEECCccceeecccccccccccccccccccccccccccccCC
Confidence            345679999999999999999999999999975  4569999999886543110             1111122356789


Q ss_pred             cccccccCC-CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1016 AAPEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1016 ~APEvl~~~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      +|||.+.+. .++.++|+|||||++|+|++|.+||.+.+..+
T Consensus       200 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~  241 (335)
T PTZ00024        200 RAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID  241 (335)
T ss_pred             CCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            999998764 46889999999999999999999998876543


No 252
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.94  E-value=2.7e-27  Score=270.15  Aligned_cols=108  Identities=23%  Similarity=0.400  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccC-C
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAE-E 1024 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~-~ 1024 (1310)
                      +..++.||++||.|||++||+||||||+||+++. .+..+||+|||++.........  ......+++.|+|||.+.+ .
T Consensus       116 ~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  194 (342)
T cd07854         116 ARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT-EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPN  194 (342)
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-CCceEEECCcccceecCCccccccccccccccccccCHHHHhCcc
Confidence            4556789999999999999999999999999974 2346899999998754321111  1112245678999998755 4


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++.++|+|||||++|+|++|..||.+.+..+
T Consensus       195 ~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~  226 (342)
T cd07854         195 NYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE  226 (342)
T ss_pred             ccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            67889999999999999999999998776543


No 253
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.94  E-value=4.7e-27  Score=265.74  Aligned_cols=160  Identities=19%  Similarity=0.358  Sum_probs=134.6

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++++..   .........|..+|..+ +||||++++++|.+.+.+|+||||+.|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999999999999999997532   12334566788888764 899999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG--HIKIADFGMCKENVFGDNRASTFCG  158 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEeCccCCCeecccCCCceeccCC
Confidence            99999998877899999999999999999999999999999999999998655  799999999985422 222334556


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (316)
T cd05620         159 TPDYIAP  165 (316)
T ss_pred             CcCccCH
Confidence            6655543


No 254
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.94  E-value=4.4e-27  Score=258.29  Aligned_cols=104  Identities=22%  Similarity=0.360  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||+|||++|++||||+|+||+++.  +..+||+|||++......... .....+++.|+|||++.+. .++
T Consensus       102 ~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~--~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  178 (283)
T cd07835         102 KSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR--EGALKLADFGLARAFGVPVRT-YTHEVVTLWYRAPEILLGSRQYS  178 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC--CCcEEEeecccccccCCCccc-cCccccccCCCCCceeecCcccC
Confidence            345679999999999999999999999999986  567999999998654322111 1122346889999988765 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|.+||.+.+..
T Consensus       179 ~~~Di~slG~~l~~l~~g~~pf~~~~~~  206 (283)
T cd07835         179 TPVDIWSIGCIFAEMVNRRPLFPGDSEI  206 (283)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            8999999999999999999999876543


No 255
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.94  E-value=4.9e-27  Score=265.89  Aligned_cols=163  Identities=25%  Similarity=0.389  Sum_probs=136.5

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHH---HhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIM---NQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL---~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      |++.+.||+|+||.||+|.++.+|+.||||++.+..   ....+.+.+|+.++   +.++||||++++++|.+.+.+|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            678999999999999999999999999999997532   22334566676665   567899999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GK  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~  337 (1310)
                      |||++||+|...+.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ..
T Consensus        81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG--FVKIADFGLCKEGMGFGDR  157 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--cEEeCcccCCccCCCCCCc
Confidence            999999999887754 5699999999999999999999999999999999999998765  8999999999864332 22


Q ss_pred             CCCcccchHHHhh
Q psy5279         338 LNPLEYDVRYVRQ  350 (1310)
Q Consensus       338 l~~~~~t~~yv~~  350 (1310)
                      ....++++.|+++
T Consensus       158 ~~~~~g~~~y~aP  170 (324)
T cd05589         158 TSTFCGTPEFLAP  170 (324)
T ss_pred             ccccccCccccCH
Confidence            3345666666554


No 256
>KOG0612|consensus
Probab=99.94  E-value=9e-29  Score=304.99  Aligned_cols=167  Identities=23%  Similarity=0.383  Sum_probs=150.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC---CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~---~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      -.++|+++++||+|+||.|..++++.|++.||+|++++-   +......|..|-.||..-+.+.||+|+.+|.++.++||
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl  152 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL  152 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence            347899999999999999999999999999999999862   22344568889999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||||+||+|...+.+.+.++|.-+++|+..|..||+-||+.|+|||||||+||||+..|  ||||+|||-+-++...|.
T Consensus       153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G--HikLADFGsClkm~~dG~  230 (1317)
T KOG0612|consen  153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG--HIKLADFGSCLKMDADGT  230 (1317)
T ss_pred             EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC--cEeeccchhHHhcCCCCc
Confidence            999999999999999988999999999999999999999999999999999999998776  999999999888776553


Q ss_pred             --CCCcccchHHHh
Q psy5279         338 --LNPLEYDVRYVR  349 (1310)
Q Consensus       338 --l~~~~~t~~yv~  349 (1310)
                        ...-+|||.|+.
T Consensus       231 V~s~~aVGTPDYIS  244 (1317)
T KOG0612|consen  231 VRSSVAVGTPDYIS  244 (1317)
T ss_pred             EEeccccCCCCccC
Confidence              345688999985


No 257
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.94  E-value=7.1e-27  Score=264.26  Aligned_cols=160  Identities=21%  Similarity=0.370  Sum_probs=134.3

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHh-cCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQ-LCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~-L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.+..+++.||+|+++...   ....+.+..|..++.. ++||||+++++++...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999997532   1233445567777765 4899999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+..... ......+|
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~g  158 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG--HIKIADFGMCKENMNGEGKASTFCG  158 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--CEEEccCcCCeECCCCCCccccccC
Confidence            99999998777899999999999999999999999999999999999998655  7999999999865332 23344566


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (316)
T cd05592         159 TPDYIAP  165 (316)
T ss_pred             CccccCH
Confidence            6666553


No 258
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.94  E-value=2.1e-27  Score=269.29  Aligned_cols=149  Identities=23%  Similarity=0.299  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||++.+..+
T Consensus       176 ~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  253 (338)
T cd05102         176 LICYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVY  253 (338)
T ss_pred             HHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC--CCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCC
Confidence            4556789999999999999999999999999975  457999999998765322111 1112234578999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhH-HHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPE-TRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e-~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +.++|||||||++|+|++ |..||.+....+ ....+....  .......+++++.+++.+|+. ++.+|+++.+++
T Consensus       254 ~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~  328 (338)
T cd05102         254 TTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT--RMRAPENATPEIYRIMLACWQGDPKERPTFSALV  328 (338)
T ss_pred             CcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            999999999999999997 999998865433 222222211  111234678899999999886 567899988765


No 259
>KOG0192|consensus
Probab=99.94  E-value=1.6e-26  Score=268.62  Aligned_cols=161  Identities=25%  Similarity=0.418  Sum_probs=138.1

Q ss_pred             eeeceecccCceEEEEEEEcCCCcE-EEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-eEEEEEec
Q psy5279         186 DFGDELGRGVTGIVYHAVERSSGRN-YAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-SFTIISEL  261 (1310)
Q Consensus       186 ~i~~~LG~GsFG~Vyka~~k~Tg~~-vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-~lyLVmEy  261 (1310)
                      .+.+.||+|+||+||+|..+  |+. ||||++.....  ...+.|.+|+.+|.+|+|||||++++++..+. .+.|||||
T Consensus        44 ~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   44 PIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             hhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            44566999999999999876  445 99999975432  22568999999999999999999999999988 79999999


Q ss_pred             CCCCchHHHhhh--cCCCCHHHHHHHHHHHHHHHHHhhhCC-eeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CC
Q psy5279         262 AGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLS-IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GK  337 (1310)
Q Consensus       262 ~~GGeL~~~l~~--~~~lsE~~i~~ii~QIl~GL~YLHs~g-IVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~  337 (1310)
                      |++|+|.+.+.+  ...++...+..++.||+.||.|||+++ ||||||||+|||++.+. .++||||||+|+..... ..
T Consensus       122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-~~~KI~DFGlsr~~~~~~~~  200 (362)
T KOG0192|consen  122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-KTLKIADFGLSREKVISKTS  200 (362)
T ss_pred             CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-CEEEECCCccceeecccccc
Confidence            999999999977  567999999999999999999999999 99999999999998653 48999999999987654 34


Q ss_pred             CCCcccchHHHh
Q psy5279         338 LNPLEYDVRYVR  349 (1310)
Q Consensus       338 l~~~~~t~~yv~  349 (1310)
                      ++...||..|++
T Consensus       201 ~~~~~GT~~wMA  212 (362)
T KOG0192|consen  201 MTSVAGTYRWMA  212 (362)
T ss_pred             ccCCCCCccccC
Confidence            444677766765


No 260
>KOG0666|consensus
Probab=99.94  E-value=7.4e-28  Score=265.59  Aligned_cols=181  Identities=25%  Similarity=0.386  Sum_probs=151.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCc----EEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEe-CC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGR----NYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYET-KD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~----~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~-~~  253 (1310)
                      ..+.|+....||+|.||.||+|+.+.++-    .||||.++..+.  ......-||+.+++.|+|||||+|..+|.. +.
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~  101 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK  101 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence            34679999999999999999998766543    689999876532  333445689999999999999999999977 88


Q ss_pred             eEEEEEecCCCCchHHHhhh-----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC--CeEEEEee
Q psy5279         254 SFTIISELAGGGELLHSLTR-----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDF  326 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~-----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~--~~VKLsDF  326 (1310)
                      .++|++||.+. +|.+.+.-     ...++..-++.++.||+.|+.|||++-|+||||||.|||+..++.  +.|||+||
T Consensus       102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence            99999999986 67777642     235889999999999999999999999999999999999987632  48999999


Q ss_pred             ccceeecCCCCCCCc-ccchHHHhhhcCCCccccCCCCC
Q psy5279         327 GLSRRITSFGKLNPL-EYDVRYVRQALRHPWLNFADRKP  364 (1310)
Q Consensus       327 GLAr~i~~~~~l~~~-~~t~~yv~~~~r~P~l~~~~~~~  364 (1310)
                      ||||.+.+  .++|+ ..++-.||.|||+|+++++.+..
T Consensus       181 GlaR~~~~--plkpl~s~d~VVVTiWYRAPELLLGa~hY  217 (438)
T KOG0666|consen  181 GLARLFNN--PLKPLASLDPVVVTIWYRAPELLLGARHY  217 (438)
T ss_pred             cHHHHhhc--cccccccCCceEEEEEecChHHhcccccc
Confidence            99998854  45665 55677799999999999995543


No 261
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94  E-value=2.3e-27  Score=261.68  Aligned_cols=97  Identities=28%  Similarity=0.450  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++||+|+||||+|||++.  +..+||+|||++......   ......+++.|+|||++.+..++.+
T Consensus        99 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~--~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~  173 (279)
T cd06619          99 RIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT--RGQVKLCDFGVSTQLVNS---IAKTYVGTNAYMAPERISGEQYGIH  173 (279)
T ss_pred             HHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC--CCCEEEeeCCcceecccc---cccCCCCChhhcCceeecCCCCCCc
Confidence            45679999999999999999999999999986  567999999998754321   1122356789999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +|+|||||++|+|++|..||..
T Consensus       174 ~DvwslG~~l~~l~~g~~pf~~  195 (279)
T cd06619         174 SDVWSLGISFMELALGRFPYPQ  195 (279)
T ss_pred             chHHHHHHHHHHHHhCCCCchh
Confidence            9999999999999999999964


No 262
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.94  E-value=1.2e-26  Score=262.84  Aligned_cols=159  Identities=20%  Similarity=0.339  Sum_probs=133.4

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHh-cCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQ-LCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~-L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.+..+++.||||+++...   .........|..+++. ++||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999999999999999997532   1233445678888876 5999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.... .......++
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG--HIKIADFGMCKENMLGDAKTCTFCG  158 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEccCCcceECCCCCCceeeecC
Confidence            99999998777799999999999999999999999999999999999998655  799999999986432 122334455


Q ss_pred             chHHHh
Q psy5279         344 DVRYVR  349 (1310)
Q Consensus       344 t~~yv~  349 (1310)
                      |+.|++
T Consensus       159 t~~y~a  164 (316)
T cd05619         159 TPDYIA  164 (316)
T ss_pred             CccccC
Confidence            555544


No 263
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.94  E-value=3.4e-27  Score=269.96  Aligned_cols=101  Identities=23%  Similarity=0.490  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+||+++.  ++.+||+|||++......    .....+++.|+|||++.+ ..++
T Consensus       123 ~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~  196 (345)
T cd07877         123 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYN  196 (345)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC--CCCEEEeccccccccccc----ccccccCCCccCHHHHhCccCCC
Confidence            445679999999999999999999999999986  456999999998654321    112245688999999876 4688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|..||.+.+..
T Consensus       197 ~~~DvwslG~il~el~~g~~pf~~~~~~  224 (345)
T cd07877         197 QTVDIWSVGCIMAELLTGRTLFPGTDHI  224 (345)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            8999999999999999999999876543


No 264
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.94  E-value=4.9e-27  Score=267.24  Aligned_cols=103  Identities=25%  Similarity=0.486  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++|++||||||+|||++.  +..+||+|||+++.....+. ......++..|+|||.+.+ ..++
T Consensus       111 ~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  187 (337)
T cd07858         111 QYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA--NCDLKICDFGLARTTSEKGD-FMTEYVVTRWYRAPELLLNCSEYT  187 (337)
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEECcCccccccCCCcc-cccccccccCccChHHHhcCCCCC
Confidence            445679999999999999999999999999975  45699999999876543221 1122345688999998875 4688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      .++|+|||||++|+|++|.+||.+.+.
T Consensus       188 ~~~DiwslG~il~~l~~g~~pf~~~~~  214 (337)
T cd07858         188 TAIDVWSVGCIFAELLGRKPLFPGKDY  214 (337)
T ss_pred             CcccHHHHHHHHHHHHcCCCCCCCCCh
Confidence            999999999999999999999987653


No 265
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94  E-value=4.9e-27  Score=266.43  Aligned_cols=106  Identities=22%  Similarity=0.424  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAE-E 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~-~ 1024 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++........   ......|++.|+|||++.+ .
T Consensus       108 ~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  185 (332)
T cd07857         108 QSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA--DCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQ  185 (332)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC--CCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCC
Confidence            345679999999999999999999999999976  456999999998765422111   1122356789999998765 4


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++.++|+||+||++|+|++|.+||.+.+...
T Consensus       186 ~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~  217 (332)
T cd07857         186 SYTKAIDVWSVGCILAELLGRKPVFKGKDYVD  217 (332)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH
Confidence            68899999999999999999999998766443


No 266
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.94  E-value=8e-27  Score=263.79  Aligned_cols=219  Identities=20%  Similarity=0.293  Sum_probs=162.9

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+++.||||++.+..   ......+.+|+.+++.+ +||||++++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999997532   22344567899999888 799999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+...+.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG--HIKIADFGMCKEGILGGVTTSTFCG  158 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--cEEecccCCCeecCcCCCcccceec
Confidence            99999988877899999999999999999999999999999999999998765  799999999976322 222334456


Q ss_pred             chHHHhhhcC--CCc------cccC-------CCCCCCCCCCcchhhh-h-----------hhcccchhhchhhhhhhcc
Q psy5279         344 DVRYVRQALR--HPW------LNFA-------DRKPTEDTPKLNTDAL-R-----------NYYNLYKDWYGNAAVRRYY  396 (1310)
Q Consensus       344 t~~yv~~~~r--~P~------l~~~-------~~~~~~~~p~~~~~~~-~-----------~~~~~~~D~~~~~~l~~~~  396 (1310)
                      |+.|+++...  .++      +.+|       .....+.  ..+...+ .           .+...+.|++...+..+..
T Consensus       159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~  236 (318)
T cd05570         159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFE--GDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPE  236 (318)
T ss_pred             CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCC--CCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHH
Confidence            6655543211  010      0000       0000010  0001110 0           1122335666666777788


Q ss_pred             cCCCC-----CCccCCCcce
Q psy5279         397 RRRPL-----NSCYTHPSRM  411 (1310)
Q Consensus       397 ~r~~~-----~~cl~hpw~~  411 (1310)
                      .|+++     .+++.|||..
T Consensus       237 ~R~s~~~~~~~~ll~~~~~~  256 (318)
T cd05570         237 KRLGCLPTGEQDIKGHPFFR  256 (318)
T ss_pred             HcCCCCCCCHHHHhcCCCcC
Confidence            99999     9999999974


No 267
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.94  E-value=5.1e-27  Score=252.78  Aligned_cols=102  Identities=20%  Similarity=0.363  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++||+|+||||+||+++.. ...+||+|||++.........  ....+++.|+|||.+.+..++.
T Consensus       104 ~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~  180 (256)
T cd08220         104 LHFFVQILLALHHVHTKLILHRDLKTQNILLDKH-KMVVKIGDFGISKILSSKSKA--YTVVGTPCYISPELCEGKPYNQ  180 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEccCCCceecCCCccc--cccccCCcccCchhccCCCCCc
Confidence            4456799999999999999999999999999753 346899999998765432211  1234668999999999888899


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||.+.+
T Consensus       181 ~~Dv~slG~~l~~l~~~~~~~~~~~  205 (256)
T cd08220         181 KSDIWALGCVLYELASLKRAFEAAN  205 (256)
T ss_pred             ccchHHHHHHHHHHHhCCCCcccCc
Confidence            9999999999999999999996543


No 268
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94  E-value=1.1e-26  Score=262.27  Aligned_cols=160  Identities=29%  Similarity=0.459  Sum_probs=134.5

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHH-HHHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNEL-DIMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI-~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.+..+|+.||+|++.+...   .....+.+|+ .+++.++|||||+++++|.+.+.+|+|||||+|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999975321   2223344555 468889999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CCCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~~~l~~~~~  343 (1310)
                      |+|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++... ........++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGLCKEGVEPEETTSTFCG  158 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEccCCCCccCCCCCCccccccC
Confidence            99999988877899999999999999999999999999999999999998765  79999999998642 2233344566


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (321)
T cd05603         159 TPEYLAP  165 (321)
T ss_pred             CcccCCH
Confidence            7766654


No 269
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.94  E-value=2.8e-26  Score=263.30  Aligned_cols=150  Identities=23%  Similarity=0.370  Sum_probs=128.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----  253 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++....  ......+.+|+.+|+.++||||++++++|...+    
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            45688999999999999999999999999999999986432  233456778999999999999999999987554    


Q ss_pred             --eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 --SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 --~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                        .+|+||||+.++ |...+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        98 ~~~~~lv~e~~~~~-l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~--~~kl~Dfg~a~~  172 (359)
T cd07876          98 FQDVYLVMELMDAN-LCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLART  172 (359)
T ss_pred             cceeEEEEeCCCcC-HHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEecCCCccc
Confidence              579999999864 555543  3488999999999999999999999999999999999998655  799999999986


Q ss_pred             ecC
Q psy5279         332 ITS  334 (1310)
Q Consensus       332 i~~  334 (1310)
                      ...
T Consensus       173 ~~~  175 (359)
T cd07876         173 ACT  175 (359)
T ss_pred             ccc
Confidence            544


No 270
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.94  E-value=2.3e-27  Score=263.20  Aligned_cols=159  Identities=21%  Similarity=0.350  Sum_probs=121.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++||+||||||+|||++.  ...++|+|||++.........  ....|++.|+|||++.+..++.
T Consensus       105 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~  180 (285)
T cd05605         105 VFYAAEITCGLEDLHRERIVYRDLKPENILLDD--YGHIRISDLGLAVEIPEGETI--RGRVGTVGYMAPEVVKNERYTF  180 (285)
T ss_pred             HHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC--CCCEEEeeCCCceecCCCCcc--ccccCCCCccCcHHhcCCCCCc
Confidence            445679999999999999999999999999975  456999999998765322211  2235678999999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccccc-ccccchhccHHHHHHHHHhcc-CCcchh-----cHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR-FEYLFKELTQEATRFLMLIFK-HEVDWI-----TLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~-f~~~~~~lS~eakdLL~~il~-~~~~ri-----t~~e~L~ 1101 (1310)
                      ++|+||+||++|+|++|..||.+.+.......+...... .......++...++|+.+|+. +|.+|+     ++.+++.
T Consensus       181 ~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         181 SPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             cccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            999999999999999999999987654332222111111 112234578899999999886 566788     7889999


Q ss_pred             CCcccccccc
Q psy5279        1102 HEFWHVKDLK 1111 (1310)
Q Consensus      1102 H~f~~~~~l~ 1111 (1310)
                      |+|+...+.+
T Consensus       261 ~~~~~~~~~~  270 (285)
T cd05605         261 HPFFRTANFK  270 (285)
T ss_pred             CcCccCCCHH
Confidence            9998765543


No 271
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.94  E-value=7.2e-27  Score=251.77  Aligned_cols=103  Identities=25%  Similarity=0.437  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.. ...+||+|||.+......... .....|++.|+|||++.+..++.
T Consensus       104 ~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~  181 (257)
T cd08225         104 LSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKN-GMVAKLGDFGIARQLNDSMEL-AYTCVGTPYYLSPEICQNRPYNN  181 (257)
T ss_pred             HHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCC-CCeEEecccccchhccCCccc-ccccCCCccccCHHHHcCCCCCc
Confidence            3456799999999999999999999999999753 235799999988655432211 12234678999999998888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||.+.+
T Consensus       182 ~~Dv~slG~il~~l~~g~~p~~~~~  206 (257)
T cd08225         182 KTDIWSLGCVLYELCTLKHPFEGNN  206 (257)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCcc
Confidence            9999999999999999999996543


No 272
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.94  E-value=1.6e-26  Score=256.47  Aligned_cols=149  Identities=28%  Similarity=0.458  Sum_probs=132.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||.||++.+..+++.||+|++.....   .....+.+|+.+|+.++||||+++++.+.+++.+++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            37889999999999999999999999999999865322   223456789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |++||+|...+...  ..+++..+..++.|++.||.|||++||+||||||+|||+++++  .+||+|||+++.+..
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~  154 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG--HIRISDLGLAVEIPE  154 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC--CEEEeeCCCceecCC
Confidence            99999998877543  3589999999999999999999999999999999999997654  799999999987644


No 273
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.94  E-value=3.1e-27  Score=260.18  Aligned_cols=97  Identities=24%  Similarity=0.427  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++|++||||||+||+++..+ ..++|+|||++......     ....+++.|+|||++.+..++.+
T Consensus       113 ~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-~~~~l~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~  186 (267)
T PHA03390        113 KIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK-DRIYLCDYGLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVS  186 (267)
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC-CeEEEecCccceecCCC-----ccCCCCCcccChhhhcCCCCCch
Confidence            3466999999999999999999999999998632 26999999998765322     12346789999999999899999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +|+|||||++|+|++|..||...
T Consensus       187 ~DvwslG~il~~l~~g~~p~~~~  209 (267)
T PHA03390        187 FDWWAVGVLTYELLTGKHPFKED  209 (267)
T ss_pred             hhHHHHHHHHHHHHHCCCCCCCC
Confidence            99999999999999999999744


No 274
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.94  E-value=7.9e-27  Score=251.13  Aligned_cols=102  Identities=25%  Similarity=0.387  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHH-----HCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC
Q psy5279         949 AYCVTSVLDGLQYLH-----WRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLH-----s~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      ..++.||+.||.|||     +.+|+|+||||+||+++.  +..+||+|||++......... .....+++.|+|||++.+
T Consensus       108 ~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~--~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~  184 (265)
T cd08217         108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA--NNNVKLGDFGLAKILGHDSSF-AKTYVGTPYYMSPEQLNH  184 (265)
T ss_pred             HHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec--CCCEEEecccccccccCCccc-ccccccCCCccChhhhcC
Confidence            445779999999999     999999999999999986  467999999998765432221 112346789999999998


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ..++.++|+|||||++|+|++|..||.+.+
T Consensus       185 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  214 (265)
T cd08217         185 MSYDEKSDIWSLGCLIYELCALSPPFTARN  214 (265)
T ss_pred             CCCCchhHHHHHHHHHHHHHHCCCcccCcC
Confidence            889999999999999999999999997654


No 275
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.94  E-value=6.4e-27  Score=254.80  Aligned_cols=103  Identities=27%  Similarity=0.639  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------------------ccccCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-------------------LIHPIN 1009 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-------------------~~~~~~ 1009 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.  ++.++|+|||++........                   ......
T Consensus       105 ~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (280)
T cd05581         105 RFYAAEILLALEYLHSKGIIHRDLKPENILLDK--DMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASF  182 (280)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEecCCccccccCCccccccCCCCCccccccccccccccccc
Confidence            345679999999999999999999999999975  45699999998865432211                   111223


Q ss_pred             CCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1010 tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .+++.|+|||++....++.++|+|||||++++|++|..||...+
T Consensus       183 ~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  226 (280)
T cd05581         183 VGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN  226 (280)
T ss_pred             cCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence            45688999999988888899999999999999999999997654


No 276
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.94  E-value=5.2e-26  Score=254.90  Aligned_cols=148  Identities=27%  Similarity=0.423  Sum_probs=130.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|.+.+.||+|+||.||+|.++.+++.||+|.++.... .....+.+|+.+|+.++||||+++++++..++.+|+||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            579999999999999999999999999999999875432 2334567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.+ +|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~  155 (309)
T cd07872          86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG--ELKLADFGLARAKS  155 (309)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEECccccceecC
Confidence            986 777777554 3488999999999999999999999999999999999998655  79999999998653


No 277
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.94  E-value=4.4e-26  Score=248.36  Aligned_cols=150  Identities=28%  Similarity=0.444  Sum_probs=137.3

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|.++.+|+.||+|++..........+.+|+.++++++||||+++++++..++.+|+||||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            46799999999999999999999999999999999755444455678999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +++|+|.+.+...+.+++.++..++.|++.||+|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~--~~~l~dfg~~~~~~  157 (267)
T cd06646          88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG--DVKLADFGVAAKIT  157 (267)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEECcCccceeec
Confidence            99999999988777899999999999999999999999999999999999997655  69999999998764


No 278
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.94  E-value=2.2e-26  Score=260.88  Aligned_cols=159  Identities=26%  Similarity=0.446  Sum_probs=134.8

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhc---CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL---CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L---~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      ||+|+||+||+|.++.+|+.||||++.+...   .....+..|..++..+   +||||++++++|...+.+|+||||++|
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            7999999999999999999999999965321   1222345677777665   699999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.... .......+|
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~g  158 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG--HIALCDFGLSKANLTDNKTTNTFCG  158 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEecCCcCcCCCCCCCCccCccC
Confidence            99999998888899999999999999999999999999999999999998655  799999999986432 333455677


Q ss_pred             chHHHhhh
Q psy5279         344 DVRYVRQA  351 (1310)
Q Consensus       344 t~~yv~~~  351 (1310)
                      |+.|+++.
T Consensus       159 t~~y~aPE  166 (330)
T cd05586         159 TTEYLAPE  166 (330)
T ss_pred             CccccCHH
Confidence            87776653


No 279
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.94  E-value=6e-26  Score=258.14  Aligned_cols=200  Identities=21%  Similarity=0.391  Sum_probs=156.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||++.++.+++.||+|++.+..   ......+.+|+.++..++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            46899999999999999999999999999999986421   122345788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++||+|.+.+.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+...+..
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~--~~kL~DfG~a~~~~~~~~~  158 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLADFGSCLKLMEDGTV  158 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEeecchheecccCCcc
Confidence            99999999999976 35689999999999999999999999999999999999998654  7999999999876443322


Q ss_pred             --CCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCC
Q psy5279         339 --NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPL  401 (1310)
Q Consensus       339 --~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~  401 (1310)
                        ...+||+.|+     +|++..+....            ...++...| | +|..+...++.+.|.
T Consensus       159 ~~~~~~gt~~y~-----aPE~~~~~~~~------------~~~~~~~~DvwSlGvil~ell~g~~Pf  208 (332)
T cd05623         159 QSSVAVGTPDYI-----SPEILQAMEDG------------KGKYGPECDWWSLGVCMYEMLYGETPF  208 (332)
T ss_pred             eecccccCcccc-----CHHHHhccccC------------CCCCCCcCCEEeeHHHHHHHhcCCCCC
Confidence              2235555554     45543211000            011333456 3 566666666666654


No 280
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.94  E-value=1.7e-26  Score=276.86  Aligned_cols=169  Identities=21%  Similarity=0.352  Sum_probs=143.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCC-CcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSS-GRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~T-g~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +....|.+.+.||+|+||.||+|....+ ++.||+|.+..........+.+|+.+|+.++|||||+++++|..++.+|||
T Consensus        64 ~~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv  143 (478)
T PTZ00267         64 PREHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI  143 (478)
T ss_pred             CcceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence            3445699999999999999999998887 788999987654444455678899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||++||+|.+.+..    ...+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~--~~kL~DFgla~~~~~  221 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG--IIKLGDFGFSKQYSD  221 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC--cEEEEeCcCceecCC
Confidence            999999999877643    34589999999999999999999999999999999999998655  799999999998754


Q ss_pred             CC---CCCCcccchHHHhh
Q psy5279         335 FG---KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       335 ~~---~l~~~~~t~~yv~~  350 (1310)
                      ..   .....+||+.|+++
T Consensus       222 ~~~~~~~~~~~gt~~y~aP  240 (478)
T PTZ00267        222 SVSLDVASSFCGTPYYLAP  240 (478)
T ss_pred             ccccccccccCCCccccCH
Confidence            32   23345677766654


No 281
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.94  E-value=6e-27  Score=256.96  Aligned_cols=107  Identities=20%  Similarity=0.370  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||+|||++||+||||||+||++++  +..+||+|||++........ ......+++.|+|||++.+. .+
T Consensus       102 ~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~--~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~  178 (284)
T cd07836         102 VKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK--RGELKLADFGLARAFGIPVN-TFSNEVVTLWYRAPDVLLGSRTY  178 (284)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCcEEEeecchhhhhcCCcc-ccccccccccccChHHhcCCCCC
Confidence            3456789999999999999999999999999975  45699999998865432111 11122356789999998764 56


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +.++|+|||||++|+|++|..||.+.+..+.
T Consensus       179 ~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~  209 (284)
T cd07836         179 STSIDIWSVGCIMAEMITGRPLFPGTNNEDQ  209 (284)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence            8899999999999999999999988765443


No 282
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.94  E-value=1.5e-26  Score=250.25  Aligned_cols=101  Identities=28%  Similarity=0.535  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccc---cCCCCCCcccccccccCCC-
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTPNPEFAAPEVLAEEP- 1025 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~---~~~tGtp~Y~APEvl~~~~- 1025 (1310)
                      .++.|++.||.|||++||+|+||||+||+++.  ...+||+|||++...........   ....+++.|+|||++.+.. 
T Consensus       103 ~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  180 (264)
T cd06626         103 VYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH--NGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKG  180 (264)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCC
Confidence            34679999999999999999999999999986  45699999999876543222111   1234568999999998766 


Q ss_pred             --CCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1026 --IFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1026 --ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                        ++.++|+|||||++|+|++|..||.+.
T Consensus       181 ~~~~~~~Dv~s~G~il~~l~~g~~pf~~~  209 (264)
T cd06626         181 KGHGRAADIWSLGCVVLEMATGKRPWSEL  209 (264)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence              788999999999999999999999643


No 283
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.94  E-value=7.1e-26  Score=250.03  Aligned_cols=164  Identities=27%  Similarity=0.406  Sum_probs=130.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcC-CCcEEEEEEEecCCc--chHHHHHHHHHHHHhc---CCCCcceEEEEEE-----e
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERS-SGRNYAAKVMTGKGN--QYKSLFKNELDIMNQL---CHRNLVRLHDSYE-----T  251 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~-Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L---~HPNIVkL~d~f~-----~  251 (1310)
                      ++|++.+.||+|+||+||+|.+.. +|+.||+|++.....  .....+.+|+.+++.+   +||||++++++|.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            468999999999999999999864 578899999865322  2234466788887776   6999999999985     3


Q ss_pred             CCeEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         252 KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       252 ~~~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      ...+++||||+. ++|.+.+...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~--~~kl~Dfg~~  157 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA  157 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC--CEEEccccce
Confidence            456999999997 4787777543  3489999999999999999999999999999999999998655  7999999999


Q ss_pred             eeecCCCCCCCcccchHHHh
Q psy5279         330 RRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       330 r~i~~~~~l~~~~~t~~yv~  349 (1310)
                      +............+|+.|++
T Consensus       158 ~~~~~~~~~~~~~~~~~y~a  177 (290)
T cd07862         158 RIYSFQMALTSVVVTLWYRA  177 (290)
T ss_pred             EeccCCcccccccccccccC
Confidence            87654433333444444433


No 284
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.94  E-value=7.5e-27  Score=254.92  Aligned_cols=100  Identities=30%  Similarity=0.548  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC--C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--I 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.. ...+||+|||++........ ......+++.|+|||.+....  +
T Consensus       111 ~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~-~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  188 (268)
T cd06624         111 IFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY-SGVVKISDFGTSKRLAGINP-CTETFTGTLQYMAPEVIDKGPRGY  188 (268)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC-CCeEEEecchhheecccCCC-ccccCCCCccccChhhhccccccC
Confidence            3456799999999999999999999999999742 34699999998865432211 122234678899999986543  6


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      +.++|+||+||++|+|++|..||.
T Consensus       189 ~~~~Dv~slGvvl~~l~~g~~p~~  212 (268)
T cd06624         189 GAPADIWSLGCTIVEMATGKPPFI  212 (268)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCc
Confidence            788899999999999999988874


No 285
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94  E-value=5e-27  Score=259.73  Aligned_cols=102  Identities=24%  Similarity=0.424  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++........ .....+++.|+|||.+.+. .++
T Consensus       106 ~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~  182 (291)
T cd07870         106 RLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY--LGELKLADFGLARAKSIPSQT-YSSEVVTLWYRPPDVLLGATDYS  182 (291)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC--CCcEEEeccccccccCCCCCC-CCCccccccccCCceeecCCCCC
Confidence            345679999999999999999999999999975  457999999988654322111 1222356889999998764 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++|+|||||++|+|++|..||.+.+
T Consensus       183 ~~~Dv~slG~~l~~l~~g~~~f~~~~  208 (291)
T cd07870         183 SALDIWGAGCIFIEMLQGQPAFPGVS  208 (291)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCch
Confidence            89999999999999999999997654


No 286
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.94  E-value=5.7e-26  Score=259.01  Aligned_cols=150  Identities=23%  Similarity=0.399  Sum_probs=136.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .++|++.+.||+|+||.||+|.+..+|+.+|+|++.... ......+.+|+++|+.++|||||+++++|...+.+|+|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            478999999999999999999999999999999987542 2344568899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+.||+|.+.+...+.+++..+..++.|++.||.|||++ +|+||||||+|||++.++  .+||+|||+++.+.
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~~~~~  155 (333)
T cd06650          84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI  155 (333)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC--CEEEeeCCcchhhh
Confidence            999999999998777899999999999999999999975 799999999999998655  79999999998653


No 287
>KOG0579|consensus
Probab=99.94  E-value=8.1e-28  Score=280.64  Aligned_cols=230  Identities=24%  Similarity=0.362  Sum_probs=181.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      -.+.|++..+||-|+||+||+|..+.|+-.-|.|+|..++....+.+.-||.||..++||+||+|++.|..++.++|..|
T Consensus        30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            45789999999999999999999999999999999987777677778889999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCC
Q psy5279         261 LAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKL  338 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l  338 (1310)
                      ||.||-....+..-+ .++|.++..+++|+|.||.|||+++|||||||..|||++-+|  .|+|+|||.+..... ...-
T Consensus       110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG--dirLADFGVSAKn~~t~qkR  187 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG--DIRLADFGVSAKNKSTRQKR  187 (1187)
T ss_pred             ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC--cEeeecccccccchhHHhhh
Confidence            999998877776544 499999999999999999999999999999999999999877  799999999765432 2234


Q ss_pred             CCcccchHHHhhh-------cCCCc------cccC-------CCCCCCC----------CCCcchh---hhhhhcccchh
Q psy5279         339 NPLEYDVRYVRQA-------LRHPW------LNFA-------DRKPTED----------TPKLNTD---ALRNYYNLYKD  385 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------~r~P~------l~~~-------~~~~~~~----------~p~~~~~---~~~~~~~~~~D  385 (1310)
                      .++.|||.++++.       ...|+      +.||       ..+|.-.          ...+++.   +-+.|...++|
T Consensus       188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~D  267 (1187)
T KOG0579|consen  188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSD  267 (1187)
T ss_pred             ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHH
Confidence            5567777666542       12222      1111       1111100          0011111   11234455588


Q ss_pred             hchhhhhhhcccCCCCCCccCCCccee
Q psy5279         386 WYGNAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       386 ~~~~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      |.-.++++....|+|+++.|.|||...
T Consensus       268 fLk~cL~Knp~~Rp~aaqll~Hpfv~~  294 (1187)
T KOG0579|consen  268 FLKRCLVKNPRNRPPAAQLLKHPFVQN  294 (1187)
T ss_pred             HHHHHHhcCCccCCCHHHHhhCccccc
Confidence            888899999999999999999999753


No 288
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93  E-value=1.4e-26  Score=258.81  Aligned_cols=103  Identities=25%  Similarity=0.479  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------cccCCCCCCccccccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||.+......+..      ......++..|+|||++.
T Consensus       104 ~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~--~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (314)
T cd08216         104 AFILKDVLNALDYIHSKGFIHRSVKASHILLSG--DGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQ  181 (314)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCcceEEEec--CCceEEecCccceeeccccccccccccccccccccccccCHHHhc
Confidence            345679999999999999999999999999985  456999999988654322211      111233567899999997


Q ss_pred             CC--CCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1023 EE--PIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1023 ~~--~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ..  .++.++|+||+||++|+|++|..||....
T Consensus       182 ~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~  214 (314)
T cd08216         182 QNLQGYNEKSDIYSVGITACELANGHVPFKDMP  214 (314)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence            63  58899999999999999999999997654


No 289
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.93  E-value=8e-26  Score=248.97  Aligned_cols=159  Identities=31%  Similarity=0.445  Sum_probs=129.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhc---CCCCcceEEEEEEe-----CC
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQL---CHRNLVRLHDSYET-----KD  253 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L---~HPNIVkL~d~f~~-----~~  253 (1310)
                      +|++.+.||+|+||.||+|.++.+|+.||+|.++....  .....+.+|+.+++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            48899999999999999999999999999999875422  2233456788877765   79999999999865     34


Q ss_pred             eEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 SFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      .+++||||+.+ +|.+.+...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~kl~dfg~~~~  157 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--QVKLADFGLARI  157 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEECccCcccc
Confidence            68999999985 777777543  3489999999999999999999999999999999999998655  799999999987


Q ss_pred             ecCCCCCCCcccch
Q psy5279         332 ITSFGKLNPLEYDV  345 (1310)
Q Consensus       332 i~~~~~l~~~~~t~  345 (1310)
                      ........+..+|+
T Consensus       158 ~~~~~~~~~~~~~~  171 (288)
T cd07863         158 YSCQMALTPVVVTL  171 (288)
T ss_pred             ccCcccCCCccccc
Confidence            65433333333333


No 290
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.93  E-value=2.9e-26  Score=251.48  Aligned_cols=105  Identities=23%  Similarity=0.425  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.  ...++|+|||++.........  ....++..|+|||++.+ ..++
T Consensus       102 ~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~--~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~  177 (283)
T cd07830         102 RSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG--PEVVKIADFGLAREIRSRPPY--TDYVSTRWYRAPEILLRSTSYS  177 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC--CCCEEEeecccceeccCCCCc--CCCCCcccccCceeeecCcCcC
Confidence            345679999999999999999999999999986  567999999998765432221  12235678999998854 4578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|+|||||++|+|++|.+||.+.+..+.
T Consensus       178 ~~~Di~s~G~~l~el~~g~~~~~~~~~~~~  207 (283)
T cd07830         178 SPVDIWALGCIMAELYTLRPLFPGSSEIDQ  207 (283)
T ss_pred             CccchhhHHHHHHHHHhCCCccCCCChHHH
Confidence            899999999999999999999988765443


No 291
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.93  E-value=9.6e-26  Score=256.24  Aligned_cols=191  Identities=22%  Similarity=0.356  Sum_probs=153.2

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+++.||+|++.+...   .....+.+|+.++.++ +||||++++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            469999999999999999999999999975422   2344577899999888 699999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.... .......+|
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG--HIKLTDYGMCKEGLGPGDTTSTFCG  158 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--CEEEeccccceeccCCCCceecccC
Confidence            99999888777899999999999999999999999999999999999998765  799999999986432 223344566


Q ss_pred             chHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         344 DVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       344 t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      |+.|+     +|++..+.                 .++...| | .|..+...++.+.|.+.
T Consensus       159 t~~y~-----aPE~~~~~-----------------~~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         159 TPNYI-----APEILRGE-----------------EYGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             CcccC-----CHHHHCCC-----------------CCCchheeehhHHHHHHHHhCCCCCCc
Confidence            66554     45543211                 1233456 3 56667777777776643


No 292
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.93  E-value=4.3e-26  Score=248.46  Aligned_cols=150  Identities=29%  Similarity=0.455  Sum_probs=137.2

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|.+.+.||+|+||.||+|.+..+++.||+|+++.........+.+|+.+++.++||||+++++++...+.+|+||||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            35788999999999999999999999999999998765444445678899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +++++|.+.+...+.+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||++....
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~~l~dfg~~~~~~  157 (267)
T cd06645          88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG--HVKLADFGVSAQIT  157 (267)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEECcceeeeEcc
Confidence            99999999988778899999999999999999999999999999999999998655  79999999998654


No 293
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.93  E-value=4.4e-26  Score=260.96  Aligned_cols=164  Identities=23%  Similarity=0.338  Sum_probs=134.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----  253 (1310)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++....  ......+.+|+.+|+.++||||++++++|....    
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            45688999999999999999999999999999999987532  223455778999999999999999999986543    


Q ss_pred             --eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 --SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 --~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                        .+|+||||+.+ .|.+.+..  .+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~--~~kl~Dfg~~~~  168 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLART  168 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC--CEEEeeCccccc
Confidence              57999999986 46555543  488999999999999999999999999999999999998655  799999999987


Q ss_pred             ecCCCCCCCcccchHHH
Q psy5279         332 ITSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv  348 (1310)
                      ........+..+|+.|+
T Consensus       169 ~~~~~~~~~~~~t~~y~  185 (355)
T cd07874         169 AGTSFMMTPYVVTRYYR  185 (355)
T ss_pred             CCCccccCCccccCCcc
Confidence            65543334444444443


No 294
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.93  E-value=4.2e-26  Score=252.55  Aligned_cols=142  Identities=25%  Similarity=0.412  Sum_probs=125.3

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ||+|+||+||+|.++.+|+.||+|++.....   ...+.+..|+.+|+.++||||+++.++|..++.+|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            7999999999999999999999999875322   1234567899999999999999999999999999999999999999


Q ss_pred             HHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         268 LHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       268 ~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ...+..    ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+..
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~  149 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG--NVRISDLGLAVELKD  149 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCccceecCC
Confidence            877632    34589999999999999999999999999999999999997654  799999999987644


No 295
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.93  E-value=1.1e-26  Score=265.45  Aligned_cols=101  Identities=25%  Similarity=0.509  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++.......    ....+++.|+|||.+.+ ..++
T Consensus       121 ~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~  194 (343)
T cd07880         121 QFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLARQTDSEM----TGYVVTRWYRAPEVILNWMHYT  194 (343)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeecccccccccCc----cccccCCcccCHHHHhCCCCCC
Confidence            445779999999999999999999999999985  4569999999987543211    12245688999999876 3578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|..||.+.+..
T Consensus       195 ~~~Di~slG~ll~~l~~g~~pf~~~~~~  222 (343)
T cd07880         195 QTVDIWSVGCIMAEMLTGKPLFKGHDHL  222 (343)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            8999999999999999999999876543


No 296
>KOG4645|consensus
Probab=99.93  E-value=1.2e-27  Score=298.19  Aligned_cols=237  Identities=25%  Similarity=0.390  Sum_probs=199.6

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..++-++.....||.|.||.||.|.+.+||...|+|-|.....  .....+.+|..+|..|+|||+|+++++=.+.+.+|
T Consensus      1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred             ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence            3566778888999999999999999999999999998764322  23345678999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-  335 (1310)
                      |.||||.||+|.+.+...+...|.-.+.|..|++.|+.|||++|||||||||+||||+.+|  .||++|||-|+.+.+. 
T Consensus      1311 IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g--~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG--LIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred             HHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC--cEEeecccceeEecCch
Confidence            9999999999999988777788999999999999999999999999999999999999766  8999999999988654 


Q ss_pred             ----CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCCccCCCc
Q psy5279         336 ----GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNSCYTHPS  409 (1310)
Q Consensus       336 ----~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~cl~hpw  409 (1310)
                          +.++.+.|||.|++     |++-.+..-              +-..-+.| | .||.++++.++|.||++ +.+.|
T Consensus      1389 ~~~~~el~~~~GT~~YMA-----PEvit~t~~--------------kG~~~A~DiWslGCVVlEM~tGkrPW~~-~dne~ 1448 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMA-----PEVITGTKG--------------KGHGGAADIWSLGCVVLEMATGKRPWAE-LDNEW 1448 (1509)
T ss_pred             hcCCHHHHhhcCCchhcC-----chhhccccc--------------CCCCcchhhhcccceEEEeecCCCchhh-ccchh
Confidence                34566788888886     554322110              01112445 7 89999999999999998 59999


Q ss_pred             ceecCCCCCCCCCCCCcceeccccccccccc
Q psy5279         410 RMIYPPGTQFTPEPTPDKVLVSRDLRDVKTW  440 (1310)
Q Consensus       410 ~~~~~~~~~~tp~~~p~~i~v~~~~rD~~~~  440 (1310)
                      +--+.-+.+-+|+ +|..  +|..+|||.+.
T Consensus      1449 aIMy~V~~gh~Pq-~P~~--ls~~g~dFle~ 1476 (1509)
T KOG4645|consen 1449 AIMYHVAAGHKPQ-IPER--LSSEGRDFLEH 1476 (1509)
T ss_pred             HHHhHHhccCCCC-Cchh--hhHhHHHHHHH
Confidence            8788888888888 8888  89999999884


No 297
>KOG0696|consensus
Probab=99.93  E-value=1.4e-26  Score=261.58  Aligned_cols=236  Identities=22%  Similarity=0.341  Sum_probs=179.5

Q ss_pred             cccccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCc
Q psy5279         856 YGAADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS  933 (1310)
Q Consensus       856 ~~~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~  933 (1310)
                      .+..|.||||.||+.  +..--+.+.+-|+.+... .+..||+....-+++-..-..++|+++.+|+...-|+       
T Consensus       371 kgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL-~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQ-------  442 (683)
T KOG0696|consen  371 KGTDELYAIKILKKDVIIQDDDVECTMVEKRVLAL-PGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-------  442 (683)
T ss_pred             cCcchhhhhhhhccceeeecCcccceehhhhheec-CCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHH-------
Confidence            356789999999987  465555666666655544 3345788877666664444456777766665332222       


Q ss_pred             ccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         934 TLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       934 l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                           +..-..+..+.+++..|+-||-|||++|||.||||.+|||+++  .++|||+|||+++..-- +...+...+|||
T Consensus       443 -----Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~--eGHiKi~DFGmcKEni~-~~~TTkTFCGTP  514 (683)
T KOG0696|consen  443 -----QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIF-DGVTTKTFCGTP  514 (683)
T ss_pred             -----HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc--CCceEeeeccccccccc-CCcceeeecCCC
Confidence                 2222334557889999999999999999999999999999986  56899999999875332 223345567889


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhc-cCCcc
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIF-KHEVD 1092 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il-~~~~~ 1092 (1310)
                      .|+|||++..++|+.++||||+||+|||||.|++||.|+++.++.+.|......+|   +.+|.+|.++.+.++ +.|.+
T Consensus       515 dYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP---KslSkEAv~ickg~ltK~P~k  591 (683)
T KOG0696|consen  515 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP---KSLSKEAVAICKGLLTKHPGK  591 (683)
T ss_pred             cccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc---ccccHHHHHHHHHHhhcCCcc
Confidence            99999999999999999999999999999999999999999999999987776666   678999999998766 56666


Q ss_pred             hhcH-----HhhhCCCccccccc
Q psy5279        1093 WITL-----ANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1093 rit~-----~e~L~H~f~~~~~l 1110 (1310)
                      |...     .++..|+||...+.
T Consensus       592 RLGcg~~ge~di~~H~FFR~iDW  614 (683)
T KOG0696|consen  592 RLGCGPEGERDIREHPFFRRIDW  614 (683)
T ss_pred             ccCCCCccccchhhCcchhhccH
Confidence            6544     34567888765443


No 298
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.93  E-value=3.2e-26  Score=264.31  Aligned_cols=147  Identities=24%  Similarity=0.372  Sum_probs=130.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----eEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----SFT  256 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----~ly  256 (1310)
                      .|++.+.||+|+||.||+|.+..+|+.||||++....  ......+.+|+.+|+.++||||+++++++..++     .+|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            3678899999999999999999999999999986432  223345789999999999999999999999887     899


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +||||+. ++|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~a~~~~  154 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC--VLKICDFGLARVEE  154 (372)
T ss_pred             EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC--CEEeccccceeecc
Confidence            9999997 57888887777899999999999999999999999999999999999998655  89999999998754


No 299
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93  E-value=8.8e-27  Score=251.87  Aligned_cols=99  Identities=20%  Similarity=0.379  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.|++.||.|||++|++|+||+|+|||++.  +..++|+|||++......... .....+++.|+|||++.+..++.++
T Consensus       106 ~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~  182 (256)
T cd08218         106 WFVQICLALKHVHDRKILHRDIKSQNIFLTK--DGTIKLGDFGIARVLNSTVEL-ARTCIGTPYYLSPEICENRPYNNKS  182 (256)
T ss_pred             HHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEEeeccceeecCcchhh-hhhccCCccccCHHHhCCCCCCCcc
Confidence            4569999999999999999999999999975  456999999998755332211 1122456889999999988889999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCC
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      |+|||||++|+|++|..||...
T Consensus       183 Dv~slG~i~~~l~~g~~~~~~~  204 (256)
T cd08218         183 DIWALGCVLYEMCTLKHAFEAG  204 (256)
T ss_pred             chhHHHHHHHHHHcCCCCccCC
Confidence            9999999999999999998643


No 300
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.93  E-value=5.5e-26  Score=248.22  Aligned_cols=106  Identities=24%  Similarity=0.388  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.|++.||.|||++||+||||+|+||+++.  +..+||+|||++......... .....+++.|+|||.+.+. .++
T Consensus       101 ~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  177 (282)
T cd07829         101 KSIMYQLLRGLAYCHSHRILHRDLKPQNILINR--DGVLKLADFGLARAFGIPLRT-YTHEVVTLWYRAPEILLGSKHYS  177 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCChheEEEcC--CCCEEEecCCcccccCCCccc-cCccccCcCcCChHHhcCCcCCC
Confidence            345679999999999999999999999999986  466999999988755332211 1122345789999998776 788


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|+|||||++|+|++|.+||.+.+..+.
T Consensus       178 ~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  207 (282)
T cd07829         178 TAVDIWSVGCIFAEMITGKPLFPGDSEIDQ  207 (282)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence            999999999999999999999988765443


No 301
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93  E-value=1.1e-26  Score=254.27  Aligned_cols=99  Identities=27%  Similarity=0.517  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.|++.||.|||++||+|+||+|+||+++.  ...++|+|||++........ ......|++.|+|||.+.+. .++.
T Consensus       105 ~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  181 (277)
T cd06917         105 VIIREVLVALKYIHKVGVIHRDIKAANILVTN--TGNVKLCDFGVAALLNQNSS-KRSTFVGTPYWMAPEVITEGKYYDT  181 (277)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC--CCCEEEccCCceeecCCCcc-ccccccCCcceeCHHHhccCCcccc
Confidence            45679999999999999999999999999986  56799999999876543221 12223467889999988653 4678


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|+|||||++|+|++|..||.+
T Consensus       182 ~~Dv~slG~~l~~ll~g~~p~~~  204 (277)
T cd06917         182 KADIWSLGITIYEMATGNPPYSD  204 (277)
T ss_pred             chhHHHHHHHHHHHHhCCCCCCC
Confidence            89999999999999999998854


No 302
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.93  E-value=2.4e-26  Score=261.55  Aligned_cols=151  Identities=24%  Similarity=0.394  Sum_probs=130.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----  252 (1310)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++.....  .....+.+|+.+|+.++||||++++++|...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            466889999999999999999999999999999999865322  2334567899999999999999999988644     


Q ss_pred             -CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         253 -DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       253 -~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                       ..+|++||++ |++|.+.+. ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~~~~  167 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC--ELRILDFGLARQ  167 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC--CEEEcCCcccee
Confidence             4579999998 667876654 45699999999999999999999999999999999999998655  799999999987


Q ss_pred             ecC
Q psy5279         332 ITS  334 (1310)
Q Consensus       332 i~~  334 (1310)
                      ...
T Consensus       168 ~~~  170 (343)
T cd07878         168 ADD  170 (343)
T ss_pred             cCC
Confidence            643


No 303
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.93  E-value=1.2e-25  Score=254.95  Aligned_cols=195  Identities=22%  Similarity=0.359  Sum_probs=152.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .|++.+.||+|+||.||+|.++.+|+.||+|++.+..   ......+..|+.+++.+. ||+|+++++++.+.+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            3678899999999999999999999999999997532   223345678899998885 577889999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l  338 (1310)
                      ||++||+|.+.+...+.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.....+ ..
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~--~ikL~Dfg~~~~~~~~~~~~  158 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG--HIKIADFGMCKEHMVDGVTT  158 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeccccccccCCCCccc
Confidence            9999999999998878899999999999999999999999999999999999998655  79999999998653322 22


Q ss_pred             CCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         339 NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       339 ~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                      ...+||+.|+     +|++..+.                 .++...| | .|..+...++++.|..
T Consensus       159 ~~~~gt~~y~-----aPE~~~~~-----------------~~~~~~DiwslGvil~elltG~~pf~  202 (323)
T cd05615         159 RTFCGTPDYI-----APEIIAYQ-----------------PYGKSVDWWAYGVLLYEMLAGQPPFD  202 (323)
T ss_pred             cCccCCcccc-----CHHHHcCC-----------------CCCCccchhhhHHHHHHHHhCCCCCC
Confidence            3345555544     34443111                 1233355 3 4666666666666543


No 304
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.93  E-value=1.8e-26  Score=250.59  Aligned_cols=101  Identities=27%  Similarity=0.455  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      .++.||+.||.|||++|++||||||+||+++.. ...+||+|||.+.........   ......++..|+|||.+.+..+
T Consensus       107 ~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  185 (268)
T cd06630         107 NYTEQLLRGLSYLHENQIIHRDVKGANLLIDST-GQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQY  185 (268)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCC
Confidence            346799999999999999999999999999752 235899999998765432111   1112346688999999998889


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +.++|+||+||++|+|++|..||..
T Consensus       186 ~~~~Dv~slG~~l~~l~~g~~p~~~  210 (268)
T cd06630         186 GRSCDVWSVGCVIIEMATAKPPWNA  210 (268)
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999854


No 305
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.93  E-value=9.1e-26  Score=243.18  Aligned_cols=162  Identities=27%  Similarity=0.477  Sum_probs=139.5

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchH--HHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~--~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      |++.+.||+|+||+||+|.+..+++.||+|++........  ....+|+.+++.++||||+++++++.....+++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            7899999999999999999999999999999987654322  23456999999999999999999999999999999999


Q ss_pred             CCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee-cCCCCCCCc
Q psy5279         263 GGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI-TSFGKLNPL  341 (1310)
Q Consensus       263 ~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i-~~~~~l~~~  341 (1310)
                      .+++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++... .........
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~  158 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG--EVKLIDFGSSVKLSENNENFNPF  158 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS--EEEESSGTTTEESTSTTSEBSSS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccc
Confidence            9999999998777899999999999999999999999999999999999998554  8999999999864 222233344


Q ss_pred             ccchHHH
Q psy5279         342 EYDVRYV  348 (1310)
Q Consensus       342 ~~t~~yv  348 (1310)
                      +++..|.
T Consensus       159 ~~~~~y~  165 (260)
T PF00069_consen  159 VGTPEYM  165 (260)
T ss_dssp             SSSGGGS
T ss_pred             ccccccc
Confidence            4454443


No 306
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.93  E-value=1.2e-26  Score=255.34  Aligned_cols=99  Identities=29%  Similarity=0.479  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.|++.||+|||++|++|+||+|+||+++.  +..++|+|||++........ ......++..|+|||++.+..++.++
T Consensus       106 ~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~  182 (277)
T cd06640         106 MLKEILKGLDYLHSEKKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIQQSAYDSKA  182 (277)
T ss_pred             HHHHHHHHHHHHHhCCccCcCCChhhEEEcC--CCCEEEcccccceeccCCcc-ccccccCcccccCHhHhccCCCccHH
Confidence            3568999999999999999999999999985  45699999999876543221 11223456789999999988899999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCC
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      |+|||||++|+|++|..||.+.
T Consensus       183 Dv~slG~il~el~tg~~p~~~~  204 (277)
T cd06640         183 DIWSLGITAIELAKGEPPNSDM  204 (277)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCc
Confidence            9999999999999999998654


No 307
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.93  E-value=1.4e-26  Score=252.37  Aligned_cols=153  Identities=23%  Similarity=0.324  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.|++.||.|||++||+||||||+||+++.  ...+||+|||++...... ........|++.|+|||++.   ...
T Consensus       109 ~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~  185 (267)
T cd06645         109 AYVSRETLQGLYYLHSKGKMHRDIKGANILLTD--NGHVKLADFGVSAQITAT-IAKRKSFIGTPYWMAPEVAAVERKGG  185 (267)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECcceeeeEccCc-ccccccccCcccccChhhhccccCCC
Confidence            445679999999999999999999999999975  456999999998655321 11122335678999999984   456


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccccccccc--chhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~--~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|+|||||++|+|++|..||...................+..  ...++..+.+++.+++. +|.+|+++.+++.|
T Consensus       186 ~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         186 YNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             CCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            8889999999999999999999997655433332222222222211  12467789999999886 57789999999999


Q ss_pred             Cc
Q psy5279        1103 EF 1104 (1310)
Q Consensus      1103 ~f 1104 (1310)
                      +|
T Consensus       266 ~~  267 (267)
T cd06645         266 PF  267 (267)
T ss_pred             CC
Confidence            87


No 308
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.93  E-value=1.6e-26  Score=256.15  Aligned_cols=104  Identities=25%  Similarity=0.386  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  ...+||+|||++...............+++.|+|||.+.+. .++
T Consensus       119 ~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  196 (302)
T cd07864         119 KSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNN--KGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYG  196 (302)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCC
Confidence            445679999999999999999999999999975  45799999999876543221111222345789999988654 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      .++|||||||++|+|++|++||...+.
T Consensus       197 ~~~Di~slG~~~~el~~g~~~~~~~~~  223 (302)
T cd07864         197 PAIDVWSCGCILGELFTKKPIFQANQE  223 (302)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            899999999999999999999976554


No 309
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93  E-value=2.6e-26  Score=250.96  Aligned_cols=107  Identities=29%  Similarity=0.464  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++|++|+||||+|||++.  +..+||+|||++...............+++.|+|||.+.+. .++
T Consensus       103 ~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~--~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  180 (287)
T cd07840         103 KCYMKQLLEGLQYLHSNGILHRDIKGSNILINN--DGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYG  180 (287)
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC--CCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCC
Confidence            445779999999999999999999999999986  45699999999876543321111222346789999987654 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|||||||++|+|++|..||.+.+....
T Consensus       181 ~~~Dv~slG~~l~el~t~~~p~~~~~~~~~  210 (287)
T cd07840         181 PEVDMWSVGCILAELFLGKPIFQGSTELEQ  210 (287)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            899999999999999999999987765443


No 310
>KOG0608|consensus
Probab=99.93  E-value=3.9e-26  Score=267.49  Aligned_cols=236  Identities=21%  Similarity=0.308  Sum_probs=174.1

Q ss_pred             ccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccc
Q psy5279         859 ADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLC  936 (1310)
Q Consensus       859 ~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~  936 (1310)
                      +..||||-||+.  +...+++|++||+-|....+..  +.+..+..+.=+            .+..-||+|..+|+.+.+
T Consensus       654 ~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~--WVVrLyySFQDk------------dnLYFVMdYIPGGDmMSL  719 (1034)
T KOG0608|consen  654 RALYAMKTLRKADVLMRNQVAHVKAERDILAEADNE--WVVRLYYSFQDK------------DNLYFVMDYIPGGDMMSL  719 (1034)
T ss_pred             hhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCc--ceEEEEEEeccC------------CceEEEEeccCCccHHHH
Confidence            678999999955  7889999999999888766542  222222222212            222234455555555556


Q ss_pred             cccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceee---------ccC------
Q psy5279         937 YLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKL------ 1001 (1310)
Q Consensus       937 ~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~---------~~~------ 1001 (1310)
                      ++.-.|.++++++|++..+.+|+++.|.+|+|||||||+||||+.  ++++||.|||++.-+         ...      
T Consensus       720 LIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDr--dGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqD  797 (1034)
T KOG0608|consen  720 LIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQD  797 (1034)
T ss_pred             HHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEcc--CCceeeeeccccccceeccccccccCCCccccc
Confidence            666678899999999999999999999999999999999999985  678999999987321         100      


Q ss_pred             -----------Cc---------------ccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1002 -----------GT---------------LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1002 -----------g~---------------~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                                 +.               .......||+.|+|||++...+|+..|||||.|||||+|+.|++||..++..
T Consensus       798 Smep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~  877 (1034)
T KOG0608|consen  798 SMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPG  877 (1034)
T ss_pred             cCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCC
Confidence                       00               0011236789999999999999999999999999999999999999999887


Q ss_pred             HHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcchhcH---HhhhCCCcccccccc
Q psy5279        1056 ETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVDWITL---ANNIDHEFWHVKDLK 1111 (1310)
Q Consensus      1056 e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~rit~---~e~L~H~f~~~~~l~ 1111 (1310)
                      ++..+|..-.  ..|+ ..-.+|.+|.+||.+|.....+|..-   .++-.|+||...+..
T Consensus       878 ~tq~kv~nw~~~l~~~-~~~~ls~e~~~li~kLc~sad~RLGkng~d~vKaHpfFkgIDfs  937 (1034)
T KOG0608|consen  878 ETQYKVINWRNFLHIP-YQGNLSKEALDLIQKLCCSADSRLGKNGADQVKAHPFFKGIDFS  937 (1034)
T ss_pred             cceeeeeehhhccccc-cccccCHHHHHHHHHHhcChhhhhcccchhhhhcCccccccchH
Confidence            7755543211  1122 23579999999999988877766543   456779998876654


No 311
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.93  E-value=1.9e-26  Score=255.55  Aligned_cols=103  Identities=24%  Similarity=0.426  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......++..|+|||.+.+..++
T Consensus       122 ~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~--~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~  199 (288)
T cd05061         122 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFT  199 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC--CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCC
Confidence            445779999999999999999999999999985  457999999998754321111 11122345679999999988899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~ 1053 (1310)
                      .++|+|||||++|+|++ |..||.+.+
T Consensus       200 ~~~DvwslG~~l~el~~~~~~p~~~~~  226 (288)
T cd05061         200 TSSDMWSFGVVLWEITSLAEQPYQGLS  226 (288)
T ss_pred             hHhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999998 788986543


No 312
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.93  E-value=2e-25  Score=256.65  Aligned_cols=164  Identities=23%  Similarity=0.336  Sum_probs=134.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----  252 (1310)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++....  ......+.+|+.+|+.++||||++++++|...     
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence            35678999999999999999999999999999999987532  23345677899999999999999999988654     


Q ss_pred             -CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         253 -DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       253 -~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                       ..+|+||||+.+ .|...+..  .+++..+..++.|++.||+|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus       101 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~  175 (364)
T cd07875         101 FQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLART  175 (364)
T ss_pred             cCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC--cEEEEeCCCccc
Confidence             357999999986 56565543  488899999999999999999999999999999999998655  799999999987


Q ss_pred             ecCCCCCCCcccchHHH
Q psy5279         332 ITSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv  348 (1310)
                      ........+..+|+.|+
T Consensus       176 ~~~~~~~~~~~~t~~y~  192 (364)
T cd07875         176 AGTSFMMTPYVVTRYYR  192 (364)
T ss_pred             cCCCCcccCCcccCCcC
Confidence            65443333444444443


No 313
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.93  E-value=1.8e-25  Score=247.14  Aligned_cols=143  Identities=23%  Similarity=0.372  Sum_probs=125.2

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ||+|+||.||++.++.+|+.||+|.+.....   .....+..|+++|++++||||++++++|+.+..+|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            7999999999999999999999999864321   1233456799999999999999999999999999999999999999


Q ss_pred             HHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         268 LHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       268 ~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ...+....  .+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||++......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~~l~Dfg~~~~~~~~  148 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG--NCRLSDLGLAVELKDG  148 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC--CEEEeeceeeeecCCC
Confidence            88775433  488888999999999999999999999999999999998655  7999999999876543


No 314
>KOG4250|consensus
Probab=99.93  E-value=2.5e-26  Score=274.90  Aligned_cols=167  Identities=26%  Similarity=0.422  Sum_probs=145.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC------eE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD------SF  255 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~------~l  255 (1310)
                      ..+...+.||+|+||.||+++++.||+.||||.++... ...++...+|++||++|+|||||++.++=++..      .-
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence            34667889999999999999999999999999987643 345667789999999999999999999876654      35


Q ss_pred             EEEEecCCCCchHHHhhhc---CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec--CCCCeEEEEeeccce
Q psy5279         256 TIISELAGGGELLHSLTRQ---SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH--PGGRHLLLTDFGLSR  330 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~---~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~--~~~~~VKLsDFGLAr  330 (1310)
                      .+|||||.||+|...+.+.   ..++|.+...++..++.||.|||++||+||||||+||++-.  +|...-||+|||.||
T Consensus        93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar  172 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR  172 (732)
T ss_pred             eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence            7999999999999999754   35999999999999999999999999999999999999853  233356999999999


Q ss_pred             eecCCCCCCCcccchHHHh
Q psy5279         331 RITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~  349 (1310)
                      .++..+..+++.||+.|.+
T Consensus       173 el~d~s~~~S~vGT~~YLh  191 (732)
T KOG4250|consen  173 ELDDNSLFTSLVGTEEYLH  191 (732)
T ss_pred             cCCCCCeeeeecCchhhcC
Confidence            9999988899999988864


No 315
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.93  E-value=1.3e-25  Score=243.34  Aligned_cols=150  Identities=26%  Similarity=0.463  Sum_probs=134.9

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-----chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-----QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-----~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      +.|++.+.||+|+||.||+|.+..+++.||+|.+.....     .....+.+|+.++++++||||+++++++..++.+|+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            458899999999999999999999999999999864321     123457889999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||||++|++|.+.+...+.+++..+..++.|++.||.|||+.||+||||||+|||++.++  .+||+|||+++....
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~--~~~l~dfg~~~~~~~  156 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG--NVKLGDFGASKRLQT  156 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEeecccceeccc
Confidence            999999999999988777899999999999999999999999999999999999998654  799999999987643


No 316
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.93  E-value=1.4e-26  Score=254.70  Aligned_cols=100  Identities=27%  Similarity=0.452  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++||||||+|||++.  +..+||+|||++........  .....+++.|+|||++.+..++.
T Consensus        98 ~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~  173 (277)
T cd05577          98 IFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD--HGNVRISDLGLAVELKGGKK--IKGRAGTPGYMAPEVLQGEVYDF  173 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEccCcchhhhccCCc--cccccCCCCcCCHHHhcCCCCCc
Confidence            445679999999999999999999999999975  45699999998865432111  12234567899999998888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+|||||++|+|++|..||.+.
T Consensus       174 ~~Di~slG~il~~l~~g~~p~~~~  197 (277)
T cd05577         174 SVDWFALGCTLYEMIAGRSPFRQR  197 (277)
T ss_pred             hhhhHHHHHHHHHHhhCCCCCCCC
Confidence            999999999999999999999654


No 317
>KOG0577|consensus
Probab=99.93  E-value=7.4e-27  Score=272.10  Aligned_cols=218  Identities=23%  Similarity=0.362  Sum_probs=176.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcch---HHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY---KSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~---~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ..|.-+++||.|+||.||-|++..+.+.||||.++-...+.   -..+..||..|++|.|||+|.+.++|..+...+|||
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM  105 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM  105 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence            34566789999999999999999999999999997543332   234778999999999999999999999999999999


Q ss_pred             ecCCCC--chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         260 ELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       260 Ey~~GG--eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||-|.  +|.+...  ..+.|.+++.++.+.+.||.|||+++.||||||..|||+++++  .|||+|||-|..+.+   
T Consensus       106 EYClGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g--~VKLaDFGSAsi~~P---  178 (948)
T KOG0577|consen  106 EYCLGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG--LVKLADFGSASIMAP---  178 (948)
T ss_pred             HHHhccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC--eeeeccccchhhcCc---
Confidence            999986  5555543  4699999999999999999999999999999999999998766  899999999987755   


Q ss_pred             CCCcccchHHHhh------------------hcCCCccccCCCCCCCCCCCcchhhhhhhcccc----------------
Q psy5279         338 LNPLEYDVRYVRQ------------------ALRHPWLNFADRKPTEDTPKLNTDALRNYYNLY----------------  383 (1310)
Q Consensus       338 l~~~~~t~~yv~~------------------~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~----------------  383 (1310)
                      .++++|||-++++                  +++-..+.++.++|    |.|++.+++.+|.++                
T Consensus       179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkP----PlFnMNAMSALYHIAQNesPtLqs~eWS~~F  254 (948)
T KOG0577|consen  179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP----PLFNMNAMSALYHIAQNESPTLQSNEWSDYF  254 (948)
T ss_pred             hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCC----CccCchHHHHHHHHHhcCCCCCCCchhHHHH
Confidence            4668888877663                  12334455556655    777888888777555                


Q ss_pred             hhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         384 KDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       384 ~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..|+..++-+-.-.|+|...||.|++..
T Consensus       255 ~~Fvd~CLqKipqeRptse~ll~H~fv~  282 (948)
T KOG0577|consen  255 RNFVDSCLQKIPQERPTSEELLKHRFVL  282 (948)
T ss_pred             HHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence            1234445555567888899999999964


No 318
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.93  E-value=2.8e-25  Score=245.10  Aligned_cols=217  Identities=20%  Similarity=0.309  Sum_probs=162.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      .|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+|++++||||+++++.|...+..++||||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            5788899999999999999999999999999986542 233456889999999999999999999999999999999999


Q ss_pred             CCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCCcc
Q psy5279         263 GGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE  342 (1310)
Q Consensus       263 ~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~~~  342 (1310)
                      ++|+|...    ..+++..+..++.|++.||+|||++||+|+||||+|||++.++  .+||+|||++..+... ..+..+
T Consensus        82 ~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~--~~~l~dfg~~~~~~~~-~~~~~~  154 (279)
T cd06619          82 DGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG--QVKLCDFGVSTQLVNS-IAKTYV  154 (279)
T ss_pred             CCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC--CEEEeeCCcceecccc-cccCCC
Confidence            99988643    3478899999999999999999999999999999999998755  7999999999876432 222234


Q ss_pred             cchHHHhhh-------------------------cCCCccccCCCCCCCCCCCcchhhh-------------hhhcccch
Q psy5279         343 YDVRYVRQA-------------------------LRHPWLNFADRKPTEDTPKLNTDAL-------------RNYYNLYK  384 (1310)
Q Consensus       343 ~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~~p~~~~~~~-------------~~~~~~~~  384 (1310)
                      +++.|+++.                         +..||..+........ +   ....             ..+...+.
T Consensus       155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~  230 (279)
T cd06619         155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-P---LQLLQCIVDEDPPVLPVGQFSEKFV  230 (279)
T ss_pred             CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-h---HHHHHHHhccCCCCCCCCcCCHHHH
Confidence            444443321                         2334322111100000 0   0000             01122345


Q ss_pred             hhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         385 DWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       385 D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      |.+...+..+...|+++.+.+.|||+.
T Consensus       231 ~li~~~l~~~P~~Rp~~~eil~~~~~~  257 (279)
T cd06619         231 HFITQCMRKQPKERPAPENLMDHPFIV  257 (279)
T ss_pred             HHHHHHhhCChhhCCCHHHHhcCcccc
Confidence            566666667788999999999999974


No 319
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.93  E-value=1.5e-25  Score=260.15  Aligned_cols=151  Identities=17%  Similarity=0.271  Sum_probs=112.8

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc-ccCCCCCCcccccccccCCC
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI-HPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~-~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ....++.||+.||.|||++||+||||||+|||++.  ...+||+|||+++......... .....+++.|+|||++.+..
T Consensus       215 ~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  292 (375)
T cd05104         215 DLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCV  292 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCC
Confidence            35567789999999999999999999999999975  4569999999987654322211 11122346799999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhH-HHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPE-TRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e-~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++.++|||||||++|+|++ |..||.+..... ..+.+.. ..... .....+.++++++..|+. ++.+|+++.+++.
T Consensus       293 ~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~  369 (375)
T cd05104         293 YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE-GYRML-SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ  369 (375)
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHh-CccCC-CCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            9999999999999999997 999998765433 2222222 12111 123467889999999886 5667988888764


No 320
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93  E-value=1.5e-26  Score=254.63  Aligned_cols=99  Identities=29%  Similarity=0.494  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.|+.|||++|++|+||||+||+++.  ++.++|+|||++....... .......++..|+|||.+.+..++.+
T Consensus       105 ~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~--~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~  181 (277)
T cd06641         105 TILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDSK  181 (277)
T ss_pred             HHHHHHHHHHHHHccCCeecCCCCHHhEEECC--CCCEEEeecccceecccch-hhhccccCCccccChhhhccCCCCch
Confidence            45679999999999999999999999999975  4569999999987653321 11122346688999999988888899


Q ss_pred             cchhHHHHHHHHHhcCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +|+||+||++|+|++|..||..
T Consensus       182 ~Dv~slG~~l~~l~~g~~p~~~  203 (277)
T cd06641         182 ADIWSLGITAIELAKGEPPHSE  203 (277)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCc
Confidence            9999999999999999999964


No 321
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.93  E-value=3e-26  Score=246.82  Aligned_cols=154  Identities=21%  Similarity=0.269  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||+.||+|+||+|+||+++.  +..+||+|||++........ ......+++.|+|||++.+..++.
T Consensus       102 ~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~  178 (256)
T cd06612         102 AAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE--EGQAKLADFGVSGQLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNN  178 (256)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCcceEEECC--CCcEEEcccccchhcccCcc-ccccccCCccccCHHHHhcCCCCc
Confidence            345679999999999999999999999999986  45699999999876543221 122334678899999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW 1105 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~ 1105 (1310)
                      ++|+|||||++|+|++|..||...+.......+.............++.++.+++.+|+. +|.+|+++.+++.|+|+
T Consensus       179 ~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         179 KADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            999999999999999999999876554433332221111111123467889999999886 67789999999999986


No 322
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.93  E-value=1.6e-25  Score=248.73  Aligned_cols=148  Identities=28%  Similarity=0.451  Sum_probs=130.9

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      |++.+.||+|+||.||+|.++.+++.||+|.+.....   .....+.+|+.+|+.++||||+.+++.+.+.+.+++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            6788899999999999999999999999999865422   2234567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++||+|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||++.....
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~  154 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPE  154 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEeeccceeecCC
Confidence            9999998887543  3589999999999999999999999999999999999998655  799999999987644


No 323
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93  E-value=1e-25  Score=275.79  Aligned_cols=100  Identities=24%  Similarity=0.329  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC---
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--- 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--- 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++. ....+||+|||+|+.+............++|.|||||.+....   
T Consensus       258 ~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~-~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~  336 (566)
T PLN03225        258 QTIMRQILFALDGLHSTGIVHRDVKPQNIIFSE-GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTP  336 (566)
T ss_pred             HHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeC-CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCC
Confidence            456789999999999999999999999999974 2356999999999765432222233446789999999764322   


Q ss_pred             -------------------CCCccchhHHHHHHHHHhcCCCCC
Q psy5279        1026 -------------------IFPQTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus      1026 -------------------ys~ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                                         ++.++|||||||++|+|+++..|+
T Consensus       337 ~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~  379 (566)
T PLN03225        337 SAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRS  379 (566)
T ss_pred             CCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCC
Confidence                               334569999999999999876654


No 324
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.93  E-value=2.8e-26  Score=266.44  Aligned_cols=150  Identities=18%  Similarity=0.270  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|||||++.+..+
T Consensus       214 ~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  291 (374)
T cd05106         214 LLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD--GRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVY  291 (374)
T ss_pred             HHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC--CCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCC
Confidence            4567889999999999999999999999999985  457999999998765322211 1111223467999999998899


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +.++|||||||++|+|++ |..||...........+....+... ....++++.++++.+++. ++.+|+++.+++
T Consensus       292 ~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~  366 (374)
T cd05106         292 TVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS-RPDFAPPEIYSIMKMCWNLEPTERPTFSQIS  366 (374)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            999999999999999997 9999987654433222222222111 123468899999999887 567898888765


No 325
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.93  E-value=3.9e-26  Score=260.72  Aligned_cols=100  Identities=26%  Similarity=0.506  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.|++.||.|||++||+||||||+|||++.  ++.+||+|||+++......    ....+++.|+|||++.+ ..++
T Consensus       120 ~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~--~~~~kL~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~  193 (342)
T cd07879         120 QYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE--DCELKILDFGLARHADAEM----TGYVVTRWYRAPEVILNWMHYN  193 (342)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCCCCcCCCCCC----CCceeeecccChhhhcCccccC
Confidence            445779999999999999999999999999986  4679999999986542211    12245688999999876 4588


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      .++|+|||||++|+|++|+.||.+.+.
T Consensus       194 ~~~Dv~slGvil~el~~g~~pf~~~~~  220 (342)
T cd07879         194 QTVDIWSVGCIMAEMLTGKTLFKGKDY  220 (342)
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            899999999999999999999987654


No 326
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93  E-value=3.1e-26  Score=259.43  Aligned_cols=105  Identities=25%  Similarity=0.412  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc------ccCCCCCCcccccccccC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI------HPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~------~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ...+|++|||.+......+...      .....++..|+|||++.+
T Consensus       105 ~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (328)
T cd08226         105 NILFGALRGLNYLHQNGYIHRNIKASHILISG--DGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQ  182 (328)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC--CCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcC
Confidence            45679999999999999999999999999985  4569999998543221111100      011233467999999976


Q ss_pred             C--CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1024 E--PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1024 ~--~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .  .++.++|+|||||++|+|++|.+||.+.....
T Consensus       183 ~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~  217 (328)
T cd08226         183 DLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ  217 (328)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH
Confidence            4  47889999999999999999999998765433


No 327
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.93  E-value=4.6e-26  Score=248.86  Aligned_cols=100  Identities=24%  Similarity=0.481  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC-cccccCCCCCCcccccccccCCC--C
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-TLIHPINTPNPEFAAPEVLAEEP--I 1026 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-~~~~~~~tGtp~Y~APEvl~~~~--y 1026 (1310)
                      .++.||+.||.|||++|++|+||||+||+++.  +..+||+|||++....... ........++..|+|||.+....  +
T Consensus       112 ~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  189 (272)
T cd06629         112 FFTEQVLEGLAYLHSKGILHRDLKADNLLVDA--DGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGY  189 (272)
T ss_pred             HHHHHHHHHHHHHhhCCeeecCCChhhEEEcC--CCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCC
Confidence            34569999999999999999999999999975  5679999999986543211 11112234668899999987654  7


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +.++|+|||||++|+|++|..||..
T Consensus       190 ~~~~Dv~slG~~l~~l~~g~~p~~~  214 (272)
T cd06629         190 SAKVDIWSLGCVVLEMFAGRRPWSD  214 (272)
T ss_pred             CccchhHHHHHHHHHHHhCCCCCcC
Confidence            8899999999999999999999954


No 328
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.93  E-value=1.1e-25  Score=249.59  Aligned_cols=150  Identities=29%  Similarity=0.510  Sum_probs=136.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|.+.+.||+|+||.||++.+..+++.||+|++....   ....+.+.+|+++|++++||||+++++++...+.+|+||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            46899999999999999999999999999999986532   233456789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||+++|+|.+.+...+.+++..+..++.||+.||.|||++||+||||||.|||++.++  .+||+|||+++....
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl~dfg~~~~~~~  153 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--YIKITDFGFAKRVKG  153 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--CEEEeeCCCccccCC
Confidence            9999999999998888899999999999999999999999999999999999998655  799999999987644


No 329
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.93  E-value=1.5e-25  Score=270.39  Aligned_cols=181  Identities=20%  Similarity=0.247  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  +..+||+|||++.............+.++|.|+|||.+......
T Consensus       311 ~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~  388 (507)
T PLN03224        311 IKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV--DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSC  388 (507)
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC--CCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCC
Confidence            3456789999999999999999999999999985  45699999999865533222223344567999999998766555


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      ..++.|+++.++.....+                                                              
T Consensus       389 ~~~~~~~~~~~l~~~~~~--------------------------------------------------------------  406 (507)
T PLN03224        389 PRAPAPAMAALLSPFAWL--------------------------------------------------------------  406 (507)
T ss_pred             CccchhhhhhhhhhhHHh--------------------------------------------------------------
Confidence            556655544332221100                                                              


Q ss_pred             cccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCC-CCCCCChh----
Q psy5279        1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS-PFRGQSEP---- 1182 (1310)
Q Consensus      1108 ~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~-PF~g~~~~---- 1182 (1310)
                                                                 -.....+||||+|||+|+|++|.. ||.+...-    
T Consensus       407 -------------------------------------------yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~  443 (507)
T PLN03224        407 -------------------------------------------YGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTEL  443 (507)
T ss_pred             -------------------------------------------cCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHH
Confidence                                                       001123799999999999999985 88642111    


Q ss_pred             -------hhhhcccccccccccchhccCHHHHHHHHHhhhcCC---CCCCCHHHhhcCCccCCc
Q psy5279        1183 -------ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP---GKRPTVEECHENRWLVPS 1236 (1310)
Q Consensus      1183 -------e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP---~kRpTa~e~L~HpWl~~~ 1236 (1310)
                             .....+....++|+ .|+.+|++++|||.+||.++|   ++|+||+|+|+||||.+.
T Consensus       444 ~~~~~~~~~~r~~~~~~~~~~-~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        444 RQYDNDLNRWRMYKGQKYDFS-LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             hhccchHHHHHhhcccCCCcc-cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence                   11122334556665 478899999999999999877   789999999999999753


No 330
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.93  E-value=2.5e-25  Score=249.57  Aligned_cols=144  Identities=25%  Similarity=0.444  Sum_probs=119.4

Q ss_pred             eceecccCceEEEEEEEc--CCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEe--CCeEEEEEecCC
Q psy5279         188 GDELGRGVTGIVYHAVER--SSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYET--KDSFTIISELAG  263 (1310)
Q Consensus       188 ~~~LG~GsFG~Vyka~~k--~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~~lyLVmEy~~  263 (1310)
                      .++||+|+||.||+|.++  .+++.||+|.+....  ....+.+|+.+|+.++|||||+++++|..  ...+|+||||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            468999999999999976  467899999986542  23456789999999999999999999854  457899999987


Q ss_pred             CCchHHHhhh---------cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC--CCCeEEEEeeccceee
Q psy5279         264 GGELLHSLTR---------QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       264 GGeL~~~l~~---------~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~--~~~~VKLsDFGLAr~i  332 (1310)
                      + +|.+.+..         ...+++..++.++.||+.||+|||++||+||||||+|||+..+  ....+||+|||+|+.+
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence            5 67666532         1248899999999999999999999999999999999999532  2347999999999876


Q ss_pred             cC
Q psy5279         333 TS  334 (1310)
Q Consensus       333 ~~  334 (1310)
                      ..
T Consensus       163 ~~  164 (317)
T cd07868         163 NS  164 (317)
T ss_pred             CC
Confidence            43


No 331
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.93  E-value=8.6e-26  Score=252.89  Aligned_cols=98  Identities=30%  Similarity=0.436  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||+|+||+++.  +..+||+|||++.......     ...+++.|+|||++.   ...
T Consensus       118 ~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~--~~~~kL~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~  190 (307)
T cd06607         118 AAICHGALQGLAYLHSHERIHRDIKAGNILLTE--PGTVKLADFGSASLVSPAN-----SFVGTPYWMAPEVILAMDEGQ  190 (307)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCcccEEECC--CCCEEEeecCcceecCCCC-----CccCCccccCceeeeccCCCC
Confidence            345779999999999999999999999999975  4579999999886543221     234568899999984   356


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++.++|||||||++|+|++|..||.+.+
T Consensus       191 ~~~~sDv~s~G~il~el~tg~~p~~~~~  218 (307)
T cd06607         191 YDGKVDVWSLGITCIELAERKPPLFNMN  218 (307)
T ss_pred             CCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence            7889999999999999999999997653


No 332
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.93  E-value=3.6e-25  Score=242.70  Aligned_cols=151  Identities=25%  Similarity=0.395  Sum_probs=135.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.+.||+|+||.||+|.++.+|+.||+|++....  ....+.+.+|+.++++++||||+++++++.....+++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            47899999999999999999999999999999886432  2234567899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |++++.|.........+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++..+...
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~  153 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG--QIKLCDFGFARILTGP  153 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC--cEEECccccceecCCC
Confidence            999988887776666799999999999999999999999999999999999998655  7999999999876543


No 333
>KOG1187|consensus
Probab=99.93  E-value=1.4e-25  Score=261.09  Aligned_cols=169  Identities=22%  Similarity=0.283  Sum_probs=138.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-eEEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-SFTIIS  259 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-~lyLVm  259 (1310)
                      .++.|.-...||+|+||.||+|.... |+.||||.+.....+....|.+|+.+|.+++|||+|+|+++|.+.+ ..+||+
T Consensus        73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVY  151 (361)
T KOG1187|consen   73 ATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVY  151 (361)
T ss_pred             HHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEE
Confidence            34666777899999999999998654 4899999887654331344999999999999999999999999999 599999


Q ss_pred             ecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCC---eeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         260 ELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLS---IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~g---IVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||++|+|.+++....  .++...-..|+.+++.||+|||...   ||||||||+|||||++  ...||+|||||+....
T Consensus       152 Eym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~--~~aKlsDFGLa~~~~~  229 (361)
T KOG1187|consen  152 EYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED--FNAKLSDFGLAKLGPE  229 (361)
T ss_pred             EccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC--CCEEccCccCcccCCc
Confidence            9999999999997654  6888888899999999999999754   9999999999999854  4899999999976644


Q ss_pred             -CCCCCCc-ccchHHHhhhc
Q psy5279         335 -FGKLNPL-EYDVRYVRQAL  352 (1310)
Q Consensus       335 -~~~l~~~-~~t~~yv~~~~  352 (1310)
                       .....+. .||..|+++.|
T Consensus       230 ~~~~~~~~~~gt~gY~~PEy  249 (361)
T KOG1187|consen  230 GDTSVSTTVMGTFGYLAPEY  249 (361)
T ss_pred             cccceeeecCCCCccCChhh
Confidence             3332222 66777766443


No 334
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.93  E-value=5.3e-26  Score=248.94  Aligned_cols=105  Identities=28%  Similarity=0.443  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++|++|+||||+||+++.  +..+||+|||++..........  ...+++.|+|||++.+..++.
T Consensus       110 ~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~--~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~PE~~~~~~~~~  185 (287)
T cd07838         110 KDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS--DGQVKIADFGLARIYSFEMALT--SVVVTLWYRAPEVLLQSSYAT  185 (287)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc--CCCEEEeccCcceeccCCcccc--cccccccccChHHhccCCCCC
Confidence            345679999999999999999999999999986  3679999999987654322211  123567899999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|+|||||++|+|++|.+||.+.+..+.
T Consensus       186 ~~Di~s~G~~l~~l~~~~~~~~~~~~~~~  214 (287)
T cd07838         186 PVDMWSVGCIFAELFRRRPLFRGTSEADQ  214 (287)
T ss_pred             cchhhhHHHHHHHHHhCCCcccCCChHHH
Confidence            99999999999999999999988765544


No 335
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93  E-value=4.5e-26  Score=251.71  Aligned_cols=99  Identities=26%  Similarity=0.413  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.|++.||.|||+ +||+||||||+||+++.  +..++|+|||++.......   .....++..|+|||++.+..++.
T Consensus       107 ~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~d~gl~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~  181 (284)
T cd06620         107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS--RGQIKLCDFGVSGELINSI---ADTFVGTSTYMSPERIQGGKYTV  181 (284)
T ss_pred             HHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC--CCcEEEccCCcccchhhhc---cCccccCcccCCHHHHccCCCCc
Confidence            345689999999997 69999999999999975  4679999999876542211   12335678999999998888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||....
T Consensus       182 ~~Di~slG~~l~~l~tg~~p~~~~~  206 (284)
T cd06620         182 KSDVWSLGISIIELALGKFPFAFSN  206 (284)
T ss_pred             cchHHHHHHHHHHHHhCCCCCcccc
Confidence            9999999999999999999997653


No 336
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=3.9e-25  Score=247.15  Aligned_cols=234  Identities=24%  Similarity=0.365  Sum_probs=174.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ....+|.+.+.||+|+||.||+|.+..+|+.||+|.+........+.+.+|+.+|+.++||||++++++|...+.+|+||
T Consensus        16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            45688999999999999999999999999999999997655455567889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC-C
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK-L  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~-l  338 (1310)
                      ||++|++|.+.+.. ..+++.++..++.|++.||.|||+.||+||||||+|||++.++  .+||+|||+++....... .
T Consensus        96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~--~~~l~Dfg~~~~~~~~~~~~  172 (297)
T cd06656          96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKR  172 (297)
T ss_pred             cccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEECcCccceEccCCccCc
Confidence            99999999998754 4689999999999999999999999999999999999998655  799999999987643321 1


Q ss_pred             CCcccchHHHhh-------------------------hcCCCccccCCCCCCC-----CCCCcchhhhhhhcccchhhch
Q psy5279         339 NPLEYDVRYVRQ-------------------------ALRHPWLNFADRKPTE-----DTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       339 ~~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~~~-----~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ....+++.|+++                         .+..||..........     ..+..  .....+...+.|++.
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~  250 (297)
T cd06656         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL--QNPERLSAVFRDFLN  250 (297)
T ss_pred             CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCC--CCccccCHHHHHHHH
Confidence            112223222221                         2333442211100000     00000  001122333466666


Q ss_pred             hhhhhhcccCCCCCCccCCCcceecCCCCC
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMIYPPGTQ  418 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~  418 (1310)
                      ..+-.+...|+++.+++.|||.....+-..
T Consensus       251 ~~l~~~p~~Rps~~~il~~~~~~~~~~~~~  280 (297)
T cd06656         251 RCLEMDVDRRGSAKELLQHPFLKLAKPLSS  280 (297)
T ss_pred             HHccCChhhCcCHHHHhcCchhcccccccc
Confidence            666667888999999999999754444333


No 337
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93  E-value=3.1e-26  Score=256.25  Aligned_cols=157  Identities=23%  Similarity=0.381  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccC--------------CcccccCCCCCCccc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL--------------GTLIHPINTPNPEFA 1016 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~--------------g~~~~~~~tGtp~Y~ 1016 (1310)
                      ++.|++.||.|||++||+||||||+|||++.  .+.+||+|||+++.....              .........+++.|+
T Consensus       106 ~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  183 (305)
T cd05609         106 YFAETVLALEYLHNYGIVHRDLKPDNLLITS--MGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYI  183 (305)
T ss_pred             HHHHHHHHHHHHHHCCccccCCchHHEEECC--CCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCcccc
Confidence            4569999999999999999999999999975  557999999987531100              000111224567899


Q ss_pred             ccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccC-Ccchhc
Q psy5279        1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKH-EVDWIT 1095 (1310)
Q Consensus      1017 APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~-~~~rit 1095 (1310)
                      |||.+.+..++.++|+|||||++|+|++|..||.+.+..+....+.......+.....++++.++++.+|+.. |.+|++
T Consensus       184 aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~  263 (305)
T cd05609         184 APEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLG  263 (305)
T ss_pred             CchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccC
Confidence            9999998889999999999999999999999999888777766665544444433346788999999998874 556776


Q ss_pred             ---HHhhhCCCcccccc
Q psy5279        1096 ---LANNIDHEFWHVKD 1109 (1310)
Q Consensus      1096 ---~~e~L~H~f~~~~~ 1109 (1310)
                         +.+.+.|+||...+
T Consensus       264 ~~~~~~ll~~~~~~~~~  280 (305)
T cd05609         264 TGGAFEVKQHRFFLGLD  280 (305)
T ss_pred             ccCHHHHHhCccccCCC
Confidence               68889999986533


No 338
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.93  E-value=8e-26  Score=256.67  Aligned_cols=106  Identities=26%  Similarity=0.477  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc----ccccCCCCCCcccccccccC-C
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT----LIHPINTPNPEFAAPEVLAE-E 1024 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~----~~~~~~tGtp~Y~APEvl~~-~ 1024 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........    .......+++.|+|||++.+ .
T Consensus       111 ~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  188 (337)
T cd07852         111 YIMYQLLKALKYIHSGNVIHRDLKPSNILLNS--DCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGST  188 (337)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccc
Confidence            45679999999999999999999999999986  56799999999875533221    11122346789999998865 4


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++.++|+|||||++|+|++|..||.+....+.
T Consensus       189 ~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~  221 (337)
T cd07852         189 RYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ  221 (337)
T ss_pred             cccccchHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            578899999999999999999999987665443


No 339
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.93  E-value=4.7e-26  Score=255.30  Aligned_cols=155  Identities=23%  Similarity=0.374  Sum_probs=122.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-------------------------
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------------------------- 1004 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------------------------- 1004 (1310)
                      .++.||+.||.|||++|++|+||||+||+++.  ++.++|+|||++.........                         
T Consensus       107 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (316)
T cd05574         107 FYAAEVLLALEYLHLLGIVYRDLKPENILLHE--SGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEE  184 (316)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCChHHeEEcC--CCCEEEeecchhhcccccccccccccccccccccccccchhhhccc
Confidence            35679999999999999999999999999986  456999999987643221110                         


Q ss_pred             ---cccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHH
Q psy5279        1005 ---IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATR 1081 (1310)
Q Consensus      1005 ---~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakd 1081 (1310)
                         ......|+..|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+......++.. ..+++++++
T Consensus       185 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  263 (316)
T cd05574         185 PSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGS-PPVSSSARD  263 (316)
T ss_pred             ccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCc-cccCHHHHH
Confidence               0011246788999999999889999999999999999999999999887776666555444444322 237899999


Q ss_pred             HHHHhcc-CCcchhc----HHhhhCCCcccc
Q psy5279        1082 FLMLIFK-HEVDWIT----LANNIDHEFWHV 1107 (1310)
Q Consensus      1082 LL~~il~-~~~~rit----~~e~L~H~f~~~ 1107 (1310)
                      ++.+|+. ++.+|++    +.+++.|+|+..
T Consensus       264 li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         264 LIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             HHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence            9999886 5677999    999999998763


No 340
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.93  E-value=4.4e-25  Score=241.19  Aligned_cols=148  Identities=26%  Similarity=0.444  Sum_probs=132.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---c-------hHHHHHHHHHHHHhcCCCCcceEEEEEEeCC
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---Q-------YKSLFKNELDIMNQLCHRNLVRLHDSYETKD  253 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~-------~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~  253 (1310)
                      +|.+.+.||+|+||.||+|.+..+|+.||+|.+.....   .       ..+.+.+|+.+|+.++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            57888999999999999999999999999998853211   1       1245778999999999999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+++||||+.||+|.+.+...+.+++..++.++.||+.||.|||++|++||||||+||+++.++  .+||+|||+++...
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~--~~~l~d~~~~~~~~  159 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG--ICKISDFGISKKSD  159 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC--eEEEeecccccccc
Confidence            9999999999999999998877899999999999999999999999999999999999998654  89999999998653


No 341
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.93  E-value=2.4e-25  Score=247.02  Aligned_cols=148  Identities=28%  Similarity=0.453  Sum_probs=130.9

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      |+..+.||+|+||+||+|.+..+++.||+|.+.....   .....+.+|+.+|+.++||||+.+++.|..++.+++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            6778899999999999999999999999999865422   2234567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +.+|+|...+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~--~~kl~Dfg~~~~~~~  154 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG--HIRISDLGLAVKIPE  154 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC--CEEEecCCcceecCC
Confidence            9999998777543  3599999999999999999999999999999999999998654  799999999987643


No 342
>KOG0201|consensus
Probab=99.93  E-value=1.1e-26  Score=266.24  Aligned_cols=229  Identities=22%  Similarity=0.308  Sum_probs=190.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ...|...+.||+|+||.||+|.+..|++.||+|++..... ...+.+.+|+.+|.++++|||.++|+.|..+..++++||
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            3456677999999999999999999999999999986543 345678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC-C
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL-N  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l-~  339 (1310)
                      ||.||++.+.+.....+.|.++..++++++.||.|||+++.+|||||+.|||+..++  .|||+|||+|-.+...... +
T Consensus        92 y~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g--~vkl~DfgVa~ql~~~~~rr~  169 (467)
T KOG0201|consen   92 YCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG--DVKLADFGVAGQLTNTVKRRK  169 (467)
T ss_pred             HhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC--cEEEEecceeeeeechhhccc
Confidence            999999999998777779999999999999999999999999999999999998765  7999999999988765433 7


Q ss_pred             CcccchHHHhhh----------------------cCCCccccCCCCC---CCCCCCcchhhhhhhcc-cchhhchhhhhh
Q psy5279         340 PLEYDVRYVRQA----------------------LRHPWLNFADRKP---TEDTPKLNTDALRNYYN-LYKDWYGNAAVR  393 (1310)
Q Consensus       340 ~~~~t~~yv~~~----------------------~r~P~l~~~~~~~---~~~~p~~~~~~~~~~~~-~~~D~~~~~~l~  393 (1310)
                      +++|||-|+++.                      +...+.++.+..|   .+..|...+-.+.+.|+ .++||++.++-+
T Consensus       170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k  249 (467)
T KOG0201|consen  170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDK  249 (467)
T ss_pred             cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhc
Confidence            889998776642                      1112222233332   34455556666655555 479999999999


Q ss_pred             hcccCCCCCCccCCCccee
Q psy5279         394 RYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       394 ~~~~r~~~~~cl~hpw~~~  412 (1310)
                      ....|+++.+.|.|+++..
T Consensus       250 ~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  250 NPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             CcccCcCHHHHhhhHHHHh
Confidence            9999999999999999743


No 343
>KOG0197|consensus
Probab=99.93  E-value=1.5e-25  Score=262.74  Aligned_cols=146  Identities=25%  Similarity=0.367  Sum_probs=129.4

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.+.+.||+|.||.|+.|....+ ..||+|.++... ...+.|.+|++||++|+|+|||+|+++|..++.+|||||||+.
T Consensus       208 l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~  285 (468)
T KOG0197|consen  208 LKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK  285 (468)
T ss_pred             HHHHHHhcCCccceEEEEEEcCC-CcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence            45678899999999999987643 368999987543 3456688999999999999999999999999999999999999


Q ss_pred             CchHHHhhh--cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         265 GELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       265 GeL~~~l~~--~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+|.+++..  ...+.-.+...++.|||+||+||+++++|||||...|||++++.  .+||+||||||.+..
T Consensus       286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~--~vKIsDFGLAr~~~d  355 (468)
T KOG0197|consen  286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL--VVKISDFGLARLIGD  355 (468)
T ss_pred             CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--eEEEcccccccccCC
Confidence            999999986  34588899999999999999999999999999999999998655  899999999995544


No 344
>KOG0589|consensus
Probab=99.93  E-value=3.6e-26  Score=266.86  Aligned_cols=167  Identities=23%  Similarity=0.406  Sum_probs=150.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe-EEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS-FTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~-lyLV  258 (1310)
                      .+.|+.++.+|+|+||.++.++++..++.|++|.|....  ...+....+|+.+++++.|||||.+++.|..++. ++||
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            367999999999999999999999999999999997543  3455678899999999999999999999999988 9999


Q ss_pred             EecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         259 SELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |+||+||+|.+.+....  .|+|..+..++.|++.||+|||+++|+|||||+.||+++.++  .|||.|||+||.+.+..
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--KVKLGDFGLAKILNPED  160 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC--ceeecchhhhhhcCCch
Confidence            99999999999997554  599999999999999999999999999999999999998766  68999999999998776


Q ss_pred             -CCCCcccchHHHhh
Q psy5279         337 -KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       337 -~l~~~~~t~~yv~~  350 (1310)
                       ...+..|||.|+-+
T Consensus       161 ~~a~tvvGTp~YmcP  175 (426)
T KOG0589|consen  161 SLASTVVGTPYYMCP  175 (426)
T ss_pred             hhhheecCCCcccCH
Confidence             67788999988754


No 345
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.93  E-value=1.6e-25  Score=243.08  Aligned_cols=100  Identities=24%  Similarity=0.450  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.   ..+||+|||++........ ......+++.|+|||.+.+..++.
T Consensus       109 ~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~---~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~  184 (260)
T cd08222         109 CEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN---NLLKIGDFGVSRLLMGSCD-LATTFTGTPYYMSPEALKHQGYDS  184 (260)
T ss_pred             HHHHHHHHHHHHHHHHcCccccCCChhheEeec---CCEeecccCceeecCCCcc-cccCCCCCcCccCHHHHccCCCCc
Confidence            445679999999999999999999999999974   4599999998876532221 122335678999999998888899


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+||||+++|+|++|..||.+.
T Consensus       185 ~~Dv~slG~~~~~l~~~~~~~~~~  208 (260)
T cd08222         185 KSDIWSLGCILYEMCCLAHAFEGQ  208 (260)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCc
Confidence            999999999999999999999654


No 346
>KOG0614|consensus
Probab=99.93  E-value=4.6e-26  Score=262.80  Aligned_cols=225  Identities=21%  Similarity=0.343  Sum_probs=175.3

Q ss_pred             chhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccc
Q psy5279         861 TYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYL  938 (1310)
Q Consensus       861 ~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L  938 (1310)
                      +||+|+||+.  ..+++..|+-+|+.|+..+.  .+|+...+-|+.=.  .           -..++..-+.|+.+..+|
T Consensus       447 ~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~--s~fIvrLYrTfrd~--k-----------yvYmLmEaClGGElWTiL  511 (732)
T KOG0614|consen  447 TFALKILKKKHIVDTKQQEHVFSERNIMMECR--SDFIVRLYRTFRDS--K-----------YVYMLMEACLGGELWTIL  511 (732)
T ss_pred             HHHHHHHhHhhccchhHHHHHHhHHHHHHhcC--chHHHHHHHHhccc--h-----------hhhhhHHhhcCchhhhhh
Confidence            6999999944  59999999999998887655  57776666554410  0           011222234555555555


Q ss_pred             c-ccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccc
Q psy5279         939 P-IVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017 (1310)
Q Consensus       939 ~-~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~A 1017 (1310)
                      . +....+..++||+..+++|++|||++|||.|||||||+|++.  .+.+||.|||+|+.+...+...+  ++|||.|.|
T Consensus       512 rdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~--~Gy~KLVDFGFAKki~~g~KTwT--FcGTpEYVA  587 (732)
T KOG0614|consen  512 RDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN--RGYLKLVDFGFAKKIGSGRKTWT--FCGTPEYVA  587 (732)
T ss_pred             hhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc--CCceEEeehhhHHHhccCCceee--ecCCccccc
Confidence            3 233455668899999999999999999999999999999986  56799999999999876665554  457799999


Q ss_pred             cccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccC-Ccchh
Q psy5279        1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKH-EVDWI 1094 (1310)
Q Consensus      1018 PEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~-~~~ri 1094 (1310)
                      ||++.+.+++.++|.||||+++||||+|.+||.+.++..++..|..+-  +.||   +.++..|.+|++++.+. |.+|.
T Consensus       588 PEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P---r~I~k~a~~Lik~LCr~~P~ERL  664 (732)
T KOG0614|consen  588 PEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP---RRITKTATDLIKKLCRDNPTERL  664 (732)
T ss_pred             chhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc---cccchhHHHHHHHHHhcCcHhhh
Confidence            999999999999999999999999999999999999999988876653  3344   67889999999987765 44555


Q ss_pred             c-----HHhhhCCCcccc
Q psy5279        1095 T-----LANNIDHEFWHV 1107 (1310)
Q Consensus      1095 t-----~~e~L~H~f~~~ 1107 (1310)
                      .     +.++-.|.||..
T Consensus       665 G~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  665 GYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             ccccCChHHHHhhhhhhc
Confidence            4     567777777764


No 347
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.93  E-value=3.1e-25  Score=255.54  Aligned_cols=141  Identities=17%  Similarity=0.234  Sum_probs=125.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      ..|++.+.||+|+||.||+|.+..+++.||+|+....      ....|+.+|++++|||||++++++...+..++||||+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  139 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY  139 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence            4699999999999999999999999999999975432      2346999999999999999999999999999999999


Q ss_pred             CCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         263 GGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       263 ~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      . |+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus       140 ~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kl~DfG~a~~~  207 (357)
T PHA03209        140 S-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--QVCIGDLGAAQFP  207 (357)
T ss_pred             C-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEecCcccccc
Confidence            6 477777754 34699999999999999999999999999999999999998655  7999999999854


No 348
>KOG0614|consensus
Probab=99.93  E-value=6.7e-28  Score=277.84  Aligned_cols=238  Identities=23%  Similarity=0.280  Sum_probs=190.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..++...||-|+||.|=++........+|+|+++++.-   +..+.+..|-.||..++.|.||+||..|.+...+||.||
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            45677889999999999988777666799999987542   334557789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP  340 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~  340 (1310)
                      -|-||+|+..+.+++.|.+..+++|+..+++|++|||++|||.|||||||+|++.+|  -+||.|||+||.+...+..-+
T Consensus       501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G--y~KLVDFGFAKki~~g~KTwT  578 (732)
T KOG0614|consen  501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG--YLKLVDFGFAKKIGSGRKTWT  578 (732)
T ss_pred             hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC--ceEEeehhhHHHhccCCceee
Confidence            999999999999999999999999999999999999999999999999999998776  899999999999999999999


Q ss_pred             cccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCCCCC
Q psy5279         341 LEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFT  420 (1310)
Q Consensus       341 ~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~t  420 (1310)
                      +||||+||+     |++-++..                 .+.+.|+|+.             .+|.+..+++.||+.+..
T Consensus       579 FcGTpEYVA-----PEIILnKG-----------------HD~avDyWaL-------------GIli~ELL~G~pPFs~~d  623 (732)
T KOG0614|consen  579 FCGTPEYVA-----PEIILNKG-----------------HDRAVDYWAL-------------GILIYELLTGSPPFSGVD  623 (732)
T ss_pred             ecCCccccc-----chhhhccC-----------------cchhhHHHHH-------------HHHHHHHHcCCCCCCCCc
Confidence            999999996     66654432                 3445775555             566677777777777666


Q ss_pred             CCCCCcceecccccccccccccccCCCCCCCcccc--cCCCCC
Q psy5279         421 PEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE--DNVPNR  461 (1310)
Q Consensus       421 p~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~--d~v~e~  461 (1310)
                      |--|...| ++..  |..+++-.+++.+-++|..+  |+-.||
T Consensus       624 pmktYn~I-LkGi--d~i~~Pr~I~k~a~~Lik~LCr~~P~ER  663 (732)
T KOG0614|consen  624 PMKTYNLI-LKGI--DKIEFPRRITKTATDLIKKLCRDNPTER  663 (732)
T ss_pred             hHHHHHHH-Hhhh--hhhhcccccchhHHHHHHHHHhcCcHhh
Confidence            54332222 3222  44445555555556666655  443444


No 349
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.93  E-value=5.7e-26  Score=245.48  Aligned_cols=153  Identities=23%  Similarity=0.280  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC---C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE---P 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~---~ 1025 (1310)
                      ..++.|++.||.|||++||+|+||||+||+++.  ++.+||+|||++......... .....+++.|+|||.+.+.   .
T Consensus       104 ~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~  180 (262)
T cd06613         104 AYVCRETLKGLAYLHETGKIHRDIKGANILLTE--DGDVKLADFGVSAQLTATIAK-RKSFIGTPYWMAPEVAAVERKGG  180 (262)
T ss_pred             HHHHHHHHHHHHHHHhCCceecCCChhhEEECC--CCCEEECccccchhhhhhhhc-cccccCCccccCchhhcccccCC
Confidence            345679999999999999999999999999985  456999999988655432211 1223456789999999877   7


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccc--cchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY--LFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~--~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|+|||||++|+|++|.+||.+.+.......+....+..+.  .....+.+.++|+.+|+. ++.+|+++.+++.|
T Consensus       181 ~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         181 YDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             cCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            888999999999999999999999887655544433333222111  123456789999999886 57789999999999


Q ss_pred             Cc
Q psy5279        1103 EF 1104 (1310)
Q Consensus      1103 ~f 1104 (1310)
                      +|
T Consensus       261 ~~  262 (262)
T cd06613         261 PF  262 (262)
T ss_pred             CC
Confidence            87


No 350
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.93  E-value=4.4e-25  Score=247.92  Aligned_cols=149  Identities=25%  Similarity=0.399  Sum_probs=134.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||.||++.+..+|..+|+|.+.... ......+.+|+++|++++||||++++++|..++.+|+||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            46899999999999999999999999999999986542 23345678999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++||+|.+.+.+.+.+++..+..++.|++.||.|||+ ++|+||||||+|||++.++  .+||+|||+++.+.
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~  151 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI  151 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC--cEEEccCCCccccc
Confidence            9999999999877789999999999999999999997 6999999999999998654  79999999998653


No 351
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=3.5e-25  Score=247.41  Aligned_cols=234  Identities=24%  Similarity=0.356  Sum_probs=174.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ....+|++.+.||+|+||.||+|.+..+++.||+|.+..........+.+|+.+|+.+.||||+++++.|......|+||
T Consensus        17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~   96 (296)
T cd06654          17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (296)
T ss_pred             CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence            34578999999999999999999999999999999997655555567889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l  338 (1310)
                      ||++||+|.+.+.. ..+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++...... ..
T Consensus        97 e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~  173 (296)
T cd06654          97 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKR  173 (296)
T ss_pred             cccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--CEEECccccchhcccccccc
Confidence            99999999998754 4689999999999999999999999999999999999997654  79999999988653321 11


Q ss_pred             CCcccchHHHh-------------------------hhcCCCccccCCCCCC-----CCCCCcchhhhhhhcccchhhch
Q psy5279         339 NPLEYDVRYVR-------------------------QALRHPWLNFADRKPT-----EDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       339 ~~~~~t~~yv~-------------------------~~~r~P~l~~~~~~~~-----~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ....+++.|++                         ..+..||.........     ...+..  .....+...+.|++.
T Consensus       174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~  251 (296)
T cd06654         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLN  251 (296)
T ss_pred             CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCC--CCccccCHHHHHHHH
Confidence            11223333322                         2233344221100000     000000  000122334566776


Q ss_pred             hhhhhhcccCCCCCCccCCCcceecCCCCC
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMIYPPGTQ  418 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~  418 (1310)
                      ..+..+...|+++.+++.|||+....+...
T Consensus       252 ~~l~~~p~~Rpt~~eil~~~~~~~~~~~~~  281 (296)
T cd06654         252 RCLDMDVEKRGSAKELLQHQFLKIAKPLSS  281 (296)
T ss_pred             HHCcCCcccCcCHHHHhhChhhhccCCccc
Confidence            777778889999999999999865444333


No 352
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.92  E-value=2e-25  Score=239.65  Aligned_cols=102  Identities=29%  Similarity=0.553  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.  ...++|+|||++....... .......++..|+|||.+.+...+.
T Consensus        96 ~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~~~  172 (250)
T cd05123          96 RFYAAEIVLALEYLHSLGIIYRDLKPENILLDA--DGHIKLTDFGLAKELSSEG-SRTNTFCGTPEYLAPEVLLGKGYGK  172 (250)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCcceEEEcC--CCcEEEeecCcceecccCC-CcccCCcCCccccChHHhCCCCCCc
Confidence            345679999999999999999999999999986  4569999999886653321 1122334567899999999888889


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+||||+++|+|++|..||...+
T Consensus       173 ~~D~~slG~~~~~l~~g~~p~~~~~  197 (250)
T cd05123         173 AVDWWSLGVLLYEMLTGKPPFYAED  197 (250)
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            9999999999999999999996543


No 353
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.92  E-value=4.4e-26  Score=254.98  Aligned_cols=156  Identities=22%  Similarity=0.321  Sum_probs=121.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.  +..+||+|||++........ ......+++.|+|||.+.+..++.
T Consensus       118 ~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  194 (296)
T cd06655         118 AAVCRECLQALEFLHANQVIHRDIKSDNVLLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGP  194 (296)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccCccchhcccccc-cCCCcCCCccccCcchhcCCCCCc
Confidence            345679999999999999999999999999975  45699999998875543221 112234668999999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      ++|+|||||++|+|++|..||.+.+.......+.............+++..++++.+|+. ++.+|+++.+++.|+|+..
T Consensus       195 ~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         195 KVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence            999999999999999999999887665443333222111112234678899999999886 5677999999999999864


No 354
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.92  E-value=2.1e-25  Score=242.64  Aligned_cols=148  Identities=27%  Similarity=0.471  Sum_probs=133.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---------hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---------YKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---------~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+......         ..+.+.+|+.++++++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            467889999999999999999999999999988653221         12457899999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .++||||+++++|.+.+...+.+++..+..++.|++.||+|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~--~~~l~dfg~~~~~~  157 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG--GIKISDFGISKKLE  157 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC--CEEecccCCCcccc
Confidence            999999999999999998777799999999999999999999999999999999999997654  79999999998775


No 355
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.92  E-value=4.5e-26  Score=254.48  Aligned_cols=150  Identities=14%  Similarity=0.231  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||++.+..+
T Consensus       140 ~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  217 (304)
T cd05096         140 LLHVALQIASGMKYLSSLNFVHRDLATRNCLVGE--NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKF  217 (304)
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCcchhheEEcC--CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCC
Confidence            3456789999999999999999999999999985  457999999998755322111 1112234578999999998899


Q ss_pred             CCccchhHHHHHHHHHhc--CCCCCCCCChhHHHhhhccc-----cccccccchhccHHHHHHHHHhcc-CCcchhcHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS--GASPFRGQSEPETRQNVNFV-----RYRFEYLFKELTQEATRFLMLIFK-HEVDWITLAN 1098 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt--G~~PF~g~~~~e~~~~I~~~-----~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e 1098 (1310)
                      +.++|||||||++|+|++  |..||.+.+..+...++...     ...+......+++..++++.+++. ++.+|+++.+
T Consensus       218 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~  297 (304)
T cd05096         218 TTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSD  297 (304)
T ss_pred             CchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence            999999999999999986  67899887766554433211     011111234567889999999886 5678999887


Q ss_pred             h
Q psy5279        1099 N 1099 (1310)
Q Consensus      1099 ~ 1099 (1310)
                      +
T Consensus       298 i  298 (304)
T cd05096         298 I  298 (304)
T ss_pred             H
Confidence            6


No 356
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.92  E-value=4e-25  Score=243.55  Aligned_cols=149  Identities=31%  Similarity=0.477  Sum_probs=134.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+|+.+|+.++||||+++++.|...+..|+||||+
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~   84 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   84 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence            45788899999999999999999999999999997655555567889999999999999999999999999999999999


Q ss_pred             CCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         263 GGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       263 ~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++|+|...+.+ ...+++..+..++.|++.||.|||+.||+||||||+|||++.++  .+||+|||+++...
T Consensus        85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~--~~kl~dfg~~~~~~  154 (282)
T cd06643          85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG--DIKLADFGVSAKNT  154 (282)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC--CEEEcccccccccc
Confidence            99999887754 34689999999999999999999999999999999999997655  79999999997653


No 357
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.92  E-value=8.5e-25  Score=243.85  Aligned_cols=148  Identities=30%  Similarity=0.441  Sum_probs=131.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|.+.+.||+|+||.||+|.++.+++.||+|.+.... ......+.+|+.+++.|+||||+++++++..++.+|+||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            57999999999999999999999999999999986543 23344567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.+ +|...+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        86 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~  155 (301)
T cd07873          86 LDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKLADFGLARAKS  155 (301)
T ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC--cEEECcCcchhccC
Confidence            984 787777653 4589999999999999999999999999999999999998655  79999999997643


No 358
>KOG0667|consensus
Probab=99.92  E-value=3e-25  Score=264.97  Aligned_cols=170  Identities=25%  Similarity=0.390  Sum_probs=144.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CC-----CcceEEEEEEeCCeE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HR-----NLVRLHDSYETKDSF  255 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HP-----NIVkL~d~f~~~~~l  255 (1310)
                      .-+|++++.||+|+||.|.+|.++.|++.||||+|+.+.. .......|+.||..|+ |.     |+|+++++|...+++
T Consensus       185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl  263 (586)
T KOG0667|consen  185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL  263 (586)
T ss_pred             EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence            3489999999999999999999999999999999986543 2333457999999997 43     799999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +||+|++.. +|.++++...  .|+-..++.++.||+.||.+||+.||||+|||||||||.+.+...|||+|||.|....
T Consensus       264 ciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~  342 (586)
T KOG0667|consen  264 CIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES  342 (586)
T ss_pred             eeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence            999999974 7999997654  4889999999999999999999999999999999999998777789999999998654


Q ss_pred             CCCCCCCcccchHHH-hhhcCCCccccCC
Q psy5279         334 SFGKLNPLEYDVRYV-RQALRHPWLNFAD  361 (1310)
Q Consensus       334 ~~~~l~~~~~t~~yv-~~~~r~P~l~~~~  361 (1310)
                      ..     .+   .|+ .+.||+|++.++-
T Consensus       343 q~-----vy---tYiQSRfYRAPEVILGl  363 (586)
T KOG0667|consen  343 QR-----VY---TYIQSRFYRAPEVILGL  363 (586)
T ss_pred             Cc-----ce---eeeeccccccchhhccC
Confidence            32     11   243 3689999987764


No 359
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.92  E-value=6.7e-26  Score=250.01  Aligned_cols=101  Identities=21%  Similarity=0.380  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC--
Q psy5279         948 DAYCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-- 1024 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-- 1024 (1310)
                      ...++.|++.||+|||+. ||+||||||+|||++.  ...+||+|||++.........  ....+++.|+|||++.+.  
T Consensus       109 ~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~  184 (288)
T cd06616         109 LGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR--NGNIKLCDFGISGQLVDSIAK--TRDAGCRPYMAPERIDPSAR  184 (288)
T ss_pred             HHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc--CCcEEEeecchhHHhccCCcc--ccccCccCccCHHHhccccc
Confidence            345678999999999984 9999999999999985  456999999998654322111  122467889999999876  


Q ss_pred             -CCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1025 -PIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1025 -~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                       .++.++|+|||||++|+|++|.+||...
T Consensus       185 ~~~~~~~Di~slG~il~el~~g~~p~~~~  213 (288)
T cd06616         185 DGYDVRSDVWSLGITLYEVATGKFPYPKW  213 (288)
T ss_pred             cCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence             6889999999999999999999999643


No 360
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.92  E-value=2e-25  Score=269.39  Aligned_cols=169  Identities=22%  Similarity=0.329  Sum_probs=140.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----  253 (1310)
                      ...++|.+.+.||+|+||+||+|.++.+|+.||||++....  ......+.+|+.+|..++|+||+++++.+...+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            34579999999999999999999999999999999997543  234456789999999999999999998876443    


Q ss_pred             ----eEEEEEecCCCCchHHHhhhc----CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEe
Q psy5279         254 ----SFTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD  325 (1310)
Q Consensus       254 ----~lyLVmEy~~GGeL~~~l~~~----~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsD  325 (1310)
                          .+++||||+++|+|.+.+...    ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~--~vkL~D  186 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG--LVKLGD  186 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC--CEEEEe
Confidence                378999999999999888542    3589999999999999999999999999999999999998655  799999


Q ss_pred             eccceeecCC---CCCCCcccchHHHhh
Q psy5279         326 FGLSRRITSF---GKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       326 FGLAr~i~~~---~~l~~~~~t~~yv~~  350 (1310)
                      ||+++.+...   ....+.+||+.|+++
T Consensus       187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aP  214 (496)
T PTZ00283        187 FGFSKMYAATVSDDVGRTFCGTPYYVAP  214 (496)
T ss_pred             cccCeeccccccccccccccCCcceeCH
Confidence            9999876432   123345666666543


No 361
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.92  E-value=1.9e-25  Score=243.06  Aligned_cols=147  Identities=21%  Similarity=0.278  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++||+||||||+||+++.  +..+||+|||+++...............+..|+|||.+.+..++.+
T Consensus       107 ~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  184 (261)
T cd05068         107 DMAAQVASGMAYLEAQNYIHRDLAARNVLVGE--NNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIK  184 (261)
T ss_pred             HHHHHHHHHHHHHHhCCeeeccCCcceEEEcC--CCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCch
Confidence            45679999999999999999999999999986  4569999999987654221111111112347999999999899999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +|+|||||++|+|++ |..||.+.+.......+... +..+ .....+....+++.+|+. +|.+|+++.+.+
T Consensus       185 ~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~  255 (261)
T cd05068         185 SDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRMP-CPPGCPKELYDIMLDCWKEDPDDRPTFETLQ  255 (261)
T ss_pred             hhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCC-CCCcCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            999999999999999 99999988777666555432 2222 123567889999999886 566888887754


No 362
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.92  E-value=1e-25  Score=249.64  Aligned_cols=100  Identities=31%  Similarity=0.463  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.||+.||.|||+.|++|+||+|+||+++.  +..++|+|||++........   ....++..|+|||.+.+..++
T Consensus       107 ~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~  181 (287)
T cd06621         107 LGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR--KGQVKLCDFGVSGELVNSLA---GTFTGTSFYMAPERIQGKPYS  181 (287)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec--CCeEEEeecccccccccccc---ccccCCccccCHHHhcCCCCC
Confidence            3456789999999999999999999999999986  45699999999865432111   123456789999999988999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|+|||||++|+|++|..||...
T Consensus       182 ~~~Dv~slG~il~~l~~g~~p~~~~  206 (287)
T cd06621         182 ITSDVWSLGLTLLEVAQNRFPFPPE  206 (287)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCcc
Confidence            9999999999999999999999754


No 363
>PTZ00284 protein kinase; Provisional
Probab=99.92  E-value=7.8e-25  Score=261.25  Aligned_cols=165  Identities=21%  Similarity=0.311  Sum_probs=131.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCC------CcceEEEEEEeC-C
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR------NLVRLHDSYETK-D  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HP------NIVkL~d~f~~~-~  253 (1310)
                      ..++|++.+.||+|+||+||+|.+..+++.||||+++... ........|+.+|+.+.|+      +|++++++|..+ +
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~  205 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG  205 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence            3578999999999999999999999999999999996432 2233456788888877654      588999998765 5


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCC--------------
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGG--------------  318 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~--------------  318 (1310)
                      .+++|||++ |++|.+.+.+.+.+++..++.++.||+.||+|||+ .|||||||||+|||++.++.              
T Consensus       206 ~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~  284 (467)
T PTZ00284        206 HMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP  284 (467)
T ss_pred             eEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence            789999988 67888888877789999999999999999999998 59999999999999986542              


Q ss_pred             CeEEEEeeccceeecCCCCCCCcccchHHHh
Q psy5279         319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       319 ~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~  349 (1310)
                      ..+||+|||++.....  .....++|+.|++
T Consensus       285 ~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~A  313 (467)
T PTZ00284        285 CRVRICDLGGCCDERH--SRTAIVSTRHYRS  313 (467)
T ss_pred             ceEEECCCCccccCcc--ccccccCCccccC
Confidence            2599999999864322  2233445544433


No 364
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.92  E-value=9.5e-25  Score=239.41  Aligned_cols=149  Identities=28%  Similarity=0.483  Sum_probs=133.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||+|.+..+|+.||+|++....  ......+.+|+.+++.++||||+++++++.....+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4889999999999999999999999999999987643  23345688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      + |++|.+.+... ..+++.++..++.||+.||.|||++||+|+||||+||+++.++  .+||+|||+++.....
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~--~~~l~dfg~~~~~~~~  152 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADFGLARLFSEE  152 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC--cEEEeeeeecccccCC
Confidence            9 99999888643 4589999999999999999999999999999999999998654  7999999999876543


No 365
>KOG0608|consensus
Probab=99.92  E-value=6.9e-26  Score=265.43  Aligned_cols=149  Identities=25%  Similarity=0.406  Sum_probs=136.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +..|..++.||-|+||+|.++...+|...||+|.+.+..--   ....++.|-.||..-+.+.||+|+..|.+++.+|+|
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence            45688899999999999999999999999999999765432   233467899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |||++||+++..|.+.+.|.|.-+++|++++..|+++.|..|+|||||||+|||||.+|  +|||+||||..-+
T Consensus       708 MdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG--HIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTDFGLCTGF  779 (1034)
T ss_pred             EeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC--ceeeeeccccccc
Confidence            99999999999999999999999999999999999999999999999999999999877  9999999998643


No 366
>KOG0577|consensus
Probab=99.92  E-value=1.3e-25  Score=261.95  Aligned_cols=98  Identities=28%  Similarity=0.414  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC---CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE---EP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~---~~ 1025 (1310)
                      +.+..+.+.||.|||+.+.||||||.-|||++.  .+.|||+|||.|....+..     .+.|||+||||||+..   +.
T Consensus       129 AAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse--~g~VKLaDFGSAsi~~PAn-----sFvGTPywMAPEVILAMDEGq  201 (948)
T KOG0577|consen  129 AAITHGALQGLAYLHSHNRIHRDIKAGNILLSE--PGLVKLADFGSASIMAPAN-----SFVGTPYWMAPEVILAMDEGQ  201 (948)
T ss_pred             HHHHHHHHHHHHHHHHhhHHhhhccccceEecC--CCeeeeccccchhhcCchh-----cccCCccccchhHheeccccc
Confidence            445668999999999999999999999999986  5679999999886654432     3568899999999863   46


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      |+.++||||||+++.||.-.++|+-..+
T Consensus       202 YdgkvDvWSLGITCIELAERkPPlFnMN  229 (948)
T KOG0577|consen  202 YDGKVDVWSLGITCIELAERKPPLFNMN  229 (948)
T ss_pred             cCCccceeeccchhhhhhhcCCCccCch
Confidence            9999999999999999999999976544


No 367
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.92  E-value=5e-26  Score=252.54  Aligned_cols=160  Identities=22%  Similarity=0.410  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  ...+||+|||++.........  ....|++.|+|||++.+..++
T Consensus       104 ~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~--~~~~g~~~~~aPE~~~~~~~~  179 (285)
T cd05632         104 ALFYAAEILCGLEDLHRENTVYRDLKPENILLDD--YGHIRISDLGLAVKIPEGESI--RGRVGTVGYMAPEVLNNQRYT  179 (285)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC--CCCEEEecCCcceecCCCCcc--cCCCCCcCccChHHhcCCCCC
Confidence            3456779999999999999999999999999975  456999999998654322111  223567999999999988999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccc-cccchhccHHHHHHHHHhcc-CCcchhc-----HHhhh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFK-HEVDWIT-----LANNI 1100 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f-~~~~~~lS~eakdLL~~il~-~~~~rit-----~~e~L 1100 (1310)
                      .++|+|||||++|+|++|..||.+.........+....... ......++.++.+|+..++. +|.+|++     ..+.+
T Consensus       180 ~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~  259 (285)
T cd05632         180 LSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVK  259 (285)
T ss_pred             cccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHH
Confidence            99999999999999999999998876654433332211111 12234678899999998886 5667888     77889


Q ss_pred             CCCcccccccc
Q psy5279        1101 DHEFWHVKDLK 1111 (1310)
Q Consensus      1101 ~H~f~~~~~l~ 1111 (1310)
                      .|+|+.....+
T Consensus       260 ~~~~~~~~~~~  270 (285)
T cd05632         260 RHPFFRNMNFK  270 (285)
T ss_pred             cChhhhcCCHH
Confidence            99998765443


No 368
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.92  E-value=4.2e-25  Score=250.59  Aligned_cols=150  Identities=26%  Similarity=0.381  Sum_probs=127.9

Q ss_pred             CCCeeeeceecccCceEEEEEEE-----cCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeC-C
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVE-----RSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETK-D  253 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~-----k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~-~  253 (1310)
                      .++|++.+.||+|+||.||+|.+     ..+++.||+|++.... ......+.+|+.+|+.+ +|||||+++++|... +
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            36799999999999999999975     3456789999986532 23345688999999999 899999999988765 4


Q ss_pred             eEEEEEecCCCCchHHHhhhc-----------------------------------------------------------
Q psy5279         254 SFTIISELAGGGELLHSLTRQ-----------------------------------------------------------  274 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~-----------------------------------------------------------  274 (1310)
                      .+|+||||++||+|.+.+...                                                           
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            689999999999999888642                                                           


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         275 ---SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       275 ---~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                         ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~  225 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIY  225 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC--cEEEeecccccccc
Confidence               2377788899999999999999999999999999999998654  79999999998764


No 369
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.92  E-value=7.2e-25  Score=243.08  Aligned_cols=150  Identities=29%  Similarity=0.451  Sum_probs=135.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..+.|++.+.||+|+||.||+|.+..+++.||+|++..........+.+|+.+++.++||||++++++|..++.+|+|||
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            34779999999999999999999999999999999976655556678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |++|++|...+.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus        90 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl~dfg~~~~~  160 (292)
T cd06644          90 FCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG--DIKLADFGVSAKN  160 (292)
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC--CEEEccCccceec
Confidence            9999999877654 34589999999999999999999999999999999999997654  7999999998764


No 370
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.92  E-value=3.6e-25  Score=243.28  Aligned_cols=150  Identities=30%  Similarity=0.465  Sum_probs=136.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|.+..+++.+|+|++........+.+.+|+.+|++++||||+++++++..++.+|+||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            46799999999999999999999999999999999765544556788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +++|+|...+... ..+++..++.++.|++.||.|||++||+||||||+|||++.++  .+||+|||++....
T Consensus        84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~--~~~l~d~g~~~~~~  154 (280)
T cd06611          84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG--DVKLADFGVSAKNK  154 (280)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC--CEEEccCccchhhc
Confidence            9999999888654 4599999999999999999999999999999999999998655  79999999987653


No 371
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.92  E-value=1.6e-24  Score=234.13  Aligned_cols=151  Identities=28%  Similarity=0.479  Sum_probs=138.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|.+..+++.+|+|++..........+.+|+.+|+.++||||+++++++...+.+|++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            46799999999999999999999999999999999765544567788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +++++|.+.+... ..+++.++..++.|++.||.|||++||+|+||||+||+++.++  .+||+|||++..+..
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d~g~~~~~~~  153 (262)
T cd06613          82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKLADFGVSAQLTA  153 (262)
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC--CEEECccccchhhhh
Confidence            9999999988765 6799999999999999999999999999999999999998655  799999999987643


No 372
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.92  E-value=8e-25  Score=237.77  Aligned_cols=150  Identities=28%  Similarity=0.495  Sum_probs=134.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .|+..+.||+|+||.||+|.+..+++.||+|++.....      .....+.+|+.+|+.++||||+++++++...+.+++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            37788999999999999999999999999999874321      134568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||||++|++|.+.+...+.+++..+..++.||+.||.|||++|++||||||+||+++.++ ..+||+|||+++.+..
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~-~~~~l~dfg~~~~~~~  156 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG-QRLRIADFGAAARLAA  156 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEEEEccccccccccc
Confidence            999999999999988777899999999999999999999999999999999999997543 4699999999987654


No 373
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.92  E-value=5.6e-25  Score=239.81  Aligned_cols=149  Identities=26%  Similarity=0.454  Sum_probs=131.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--c---chHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--N---QYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSF  255 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~l  255 (1310)
                      ..|++.+.||+|+||.||+|.+..+|+.||+|.+....  .   .....+.+|+.+|+.++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            46889999999999999999999999999999886321  1   2235678899999999999999999998764  578


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+||||++||+|.+.+.+...+++..+..++.|++.||.|||++||+|+||||+|||++.++  .+||+|||+++...
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~Dfg~~~~~~  157 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG--NVKLGDFGASKRLQ  157 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC--CEEECcCccccccc
Confidence            99999999999999988777789999999999999999999999999999999999998654  79999999998653


No 374
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.92  E-value=3.5e-25  Score=241.54  Aligned_cols=151  Identities=24%  Similarity=0.428  Sum_probs=132.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeC------
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETK------  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~------  252 (1310)
                      +....|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+|+.+ +||||+++++.|...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            34567889999999999999999999999999999987543 3345678899999998 799999999998753      


Q ss_pred             CeEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         253 DSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ..+|+||||+.+|+|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~--~~~l~Dfg~~~  159 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA--EVKLVDFGVSA  159 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCC--CEEEccCCCce
Confidence            4689999999999999988753  3589999999999999999999999999999999999998655  79999999998


Q ss_pred             eec
Q psy5279         331 RIT  333 (1310)
Q Consensus       331 ~i~  333 (1310)
                      ...
T Consensus       160 ~~~  162 (272)
T cd06637         160 QLD  162 (272)
T ss_pred             ecc
Confidence            764


No 375
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.92  E-value=7.4e-26  Score=252.83  Aligned_cols=154  Identities=21%  Similarity=0.333  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.|++.||.|||++||+||||||+|||++.  +..+||+|||++........ ......+++.|+|||.+.+..++.++
T Consensus       121 i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~  197 (296)
T cd06654         121 VCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKV  197 (296)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEEcC--CCCEEECccccchhcccccc-ccCcccCCccccCHHHHcCCCCCccc
Confidence            4569999999999999999999999999975  45799999998865432211 11223567899999999988899999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      |+|||||++|+|++|..||...+.......+.............+++..++++.+|+. ++.+|+++.+++.|+|+..
T Consensus       198 Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~  275 (296)
T cd06654         198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (296)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence            9999999999999999999877654332222211111111234578889999999886 6778999999999999764


No 376
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.92  E-value=6.1e-25  Score=256.36  Aligned_cols=147  Identities=21%  Similarity=0.378  Sum_probs=129.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEc--CCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVER--SSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k--~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+..+|++.+.||+|+||.||+|...  .+++.||+|.+...     ....+|+.+|++|+|||||+++++|...+.+|+
T Consensus        89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l  163 (392)
T PHA03207         89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCM  163 (392)
T ss_pred             hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence            35578999999999999999999764  45688999988643     234689999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||++. ++|.+.+.....+++.++..++.||+.||.|||++|||||||||+|||++.++  .+||+|||+|+.+..
T Consensus       164 v~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~--~~~l~DfG~a~~~~~  237 (392)
T PHA03207        164 VMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE--NAVLGDFGAACKLDA  237 (392)
T ss_pred             EehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEccCccccccCc
Confidence            999996 57888887667799999999999999999999999999999999999998655  799999999987643


No 377
>KOG0669|consensus
Probab=99.92  E-value=3e-27  Score=254.91  Aligned_cols=182  Identities=26%  Similarity=0.426  Sum_probs=155.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEe--cCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-------
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-------  252 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~--~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-------  252 (1310)
                      ...|+...+||+|.||.||+|+++.+|+.||+|++-  ..+........+|+.+|..|.|+|++.|+++|.+.       
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~   95 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD   95 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence            356788889999999999999999999999998653  23344555667999999999999999998887543       


Q ss_pred             -CeEEEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         253 -DSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       253 -~~lyLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                       ..+||||.+|+. +|+..+... ..|+..+++.+|.+++.||.|+|+..|+|||+||+|+||+.++  .+||+|||+||
T Consensus        96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dg--ilklADFGlar  172 (376)
T KOG0669|consen   96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDG--ILKLADFGLAR  172 (376)
T ss_pred             cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCc--eEEeecccccc
Confidence             359999999986 787777655 5699999999999999999999999999999999999998766  89999999999


Q ss_pred             eecCCCCCCCcccchHHHhhhcCCCccccCCCCCCC
Q psy5279         331 RITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTE  366 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~  366 (1310)
                      .++.........||-..|++|||.|++.++++....
T Consensus       173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~  208 (376)
T KOG0669|consen  173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGP  208 (376)
T ss_pred             ceecccccCCCCcccceeeeecCCHHHhhcccccCC
Confidence            887655555556899999999999999999887543


No 378
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.92  E-value=9.8e-25  Score=239.62  Aligned_cols=147  Identities=27%  Similarity=0.448  Sum_probs=129.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .|++.+.||+|+||.||+|.++.+|+.||+|++....  ......+.+|+.+|+.++||||+++++++..++.+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4788999999999999999999999999999986432  22345678899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhh---cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTR---QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~---~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +. ++|.+.+..   ...+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~  152 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG--VIKLADFGLARAFG  152 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC--cEEECcccceeecC
Confidence            98 477776643   24589999999999999999999999999999999999998655  79999999998653


No 379
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.92  E-value=1.9e-25  Score=250.01  Aligned_cols=158  Identities=23%  Similarity=0.362  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++||+||||||+|||++.  +..+||+|||++........ ......+++.|+|||++.+..++.+
T Consensus       121 ~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~--~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  197 (297)
T cd06659         121 TVCESVLQALCYLHSQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRTPYGTE  197 (297)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc--CCcEEEeechhHhhcccccc-cccceecCccccCHHHHccCCCCch
Confidence            34669999999999999999999999999975  45799999998865432211 1122346789999999998889999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCccccc
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                      +|+|||||++|+|++|..||...+..+....+.............++.+..+++.+|+. ++.+|+++.+.++|+|+...
T Consensus       198 ~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         198 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence            99999999999999999999887766555444332222222334578889999999886 56789999999999998755


Q ss_pred             cc
Q psy5279        1109 DL 1110 (1310)
Q Consensus      1109 ~l 1110 (1310)
                      .+
T Consensus       278 ~~  279 (297)
T cd06659         278 GL  279 (297)
T ss_pred             CC
Confidence            44


No 380
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.92  E-value=1.1e-25  Score=256.16  Aligned_cols=99  Identities=25%  Similarity=0.520  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys~ 1028 (1310)
                      .++.||++||.|||++||+||||||+|||++.  ...+||+|||++.......    ....+++.|+|||.+.+ ..++.
T Consensus       112 ~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~--~~~~~l~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~  185 (328)
T cd07856         112 YFLYQILRGLKYVHSAGVVHRDLKPSNILINE--NCDLKICDFGLARIQDPQM----TGYVSTRYYRAPEIMLTWQKYDV  185 (328)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCHHHEeECC--CCCEEeCccccccccCCCc----CCCcccccccCceeeeccCCcCc
Confidence            45679999999999999999999999999975  4579999999886543211    11235678999999866 56889


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|+|||||++|+|++|..||.+...
T Consensus       186 ~~Dv~slG~il~el~tg~~~f~~~~~  211 (328)
T cd07856         186 EVDIWSAGCIFAEMLEGKPLFPGKDH  211 (328)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999987654


No 381
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.92  E-value=1.2e-24  Score=240.32  Aligned_cols=148  Identities=29%  Similarity=0.433  Sum_probs=131.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .+.|++.+.||+|+||.||+|.++.+++.||+|.+..... .....+.+|+.+|+.++||||+++++++.+.+..|+|||
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            3679999999999999999999999999999999865422 223446789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |+.+ +|.+.+.+. ..+++..++.++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus        84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~  153 (291)
T cd07844          84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLADFGLARAK  153 (291)
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC--CEEECcccccccc
Confidence            9985 888877653 4589999999999999999999999999999999999998765  7999999999764


No 382
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.92  E-value=5.1e-25  Score=246.40  Aligned_cols=242  Identities=24%  Similarity=0.380  Sum_probs=179.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ...+|++.+.||.|+||.||+|.+..+|+.||+|.+........+.+.+|+.+++.++||||+++++++...+.+|+|+|
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence            34679999999999999999999999999999999976555556678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC-CC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK-LN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~-l~  339 (1310)
                      |+.||+|...+.. ..+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++....... ..
T Consensus        97 ~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~  173 (296)
T cd06655          97 YLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG--SVKLTDFGFCAQITPEQSKRS  173 (296)
T ss_pred             ecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEccCccchhcccccccCC
Confidence            9999999888764 4689999999999999999999999999999999999998654  799999999986543321 11


Q ss_pred             CcccchHHHhh-------------------------hcCCCccccCCCCC-----CCCCCCcchhhhhhhcccchhhchh
Q psy5279         340 PLEYDVRYVRQ-------------------------ALRHPWLNFADRKP-----TEDTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       340 ~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~-----~~~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      ..++++.|+++                         .+..||........     ....+..  .....+...+.+++..
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~  251 (296)
T cd06655         174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSPIFRDFLNR  251 (296)
T ss_pred             CcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCccc--CCcccCCHHHHHHHHH
Confidence            12333333222                         12223211100000     0000000  0001122334666777


Q ss_pred             hhhhhcccCCCCCCccCCCcceecCCCCCCCCCCCCcc
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDK  427 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp~~~p~~  427 (1310)
                      .+..+...|+++.+++.|||.....+....++...|.+
T Consensus       252 ~l~~dp~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~  289 (296)
T cd06655         252 CLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAK  289 (296)
T ss_pred             HhhcChhhCCCHHHHhhChHhhhccccccCCccccchh
Confidence            77778899999999999999876667666666644443


No 383
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.92  E-value=1.1e-24  Score=241.57  Aligned_cols=148  Identities=32%  Similarity=0.519  Sum_probs=132.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc-----hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-----YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~-----~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +|++.+.||+|+||.||+|.+..+|+.||||.+......     ....+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            478889999999999999999999999999999754322     234567899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||+ +|+|.+.+.... .+++..+..++.||++||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~--~~~l~dfg~~~~~~~  154 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG--VLKLADFGLARSFGS  154 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC--CEEEccceeeeeccC
Confidence            9999 889999987665 699999999999999999999999999999999999998655  799999999987654


No 384
>PHA02988 hypothetical protein; Provisional
Probab=99.92  E-value=7e-26  Score=252.41  Aligned_cols=144  Identities=13%  Similarity=0.127  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC--CCCC
Q psy5279         951 CVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE--EPIF 1027 (1310)
Q Consensus       951 i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~--~~ys 1027 (1310)
                      ++.|++.||.|||+ .+++||||||+|||++.  ++.+||+|||+++......    ....+++.|+|||++.+  ..++
T Consensus       127 i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~--~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~  200 (283)
T PHA02988        127 MAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE--NYKLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYT  200 (283)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCcCChhhEEECC--CCcEEEcccchHhhhcccc----ccccCcccccCHHHhhhcccccc
Confidence            45699999999998 49999999999999986  4679999999987543211    12346789999999976  6789


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .++|||||||++|+|++|..||.+.+..+....+.....+++ .....+++.++|+.+++. ++.+|+++.+++.
T Consensus       201 ~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        201 IKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK-LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             chhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            999999999999999999999999887777666644333332 123578899999999887 5668999888763


No 385
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.92  E-value=1.2e-24  Score=249.37  Aligned_cols=151  Identities=23%  Similarity=0.365  Sum_probs=129.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----  253 (1310)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|++.+..  ......+.+|+.+|+.++||||++++++|....     
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            5678999999999999999999999999999999986432  233445778999999999999999999986543     


Q ss_pred             -eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         254 -SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       254 -~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                       ..|+||||+.+ +|.+.+...  +++..+..++.|++.||+|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~  168 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTA  168 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--CEEEccCccceeC
Confidence             57999999975 777766543  89999999999999999999999999999999999998665  7999999999876


Q ss_pred             cCCC
Q psy5279         333 TSFG  336 (1310)
Q Consensus       333 ~~~~  336 (1310)
                      ....
T Consensus       169 ~~~~  172 (353)
T cd07850         169 GTSF  172 (353)
T ss_pred             CCCC
Confidence            5443


No 386
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.92  E-value=3.3e-25  Score=242.73  Aligned_cols=150  Identities=18%  Similarity=0.283  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||++.+..+
T Consensus       124 ~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (280)
T cd05049         124 LLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY--DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKF  201 (280)
T ss_pred             HHHHHHHHHHHHHHHhhCCeeccccccceEEEcC--CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCc
Confidence            3456789999999999999999999999999985  467999999998754322111 1112234578999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+......  .....++.+.++++.+|+. ++.+|+++.++++
T Consensus       202 ~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         202 TTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLL--QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             chhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            999999999999999998 99999888777766665543322  2234678899999999886 5678999887653


No 387
>KOG4279|consensus
Probab=99.92  E-value=1.5e-25  Score=264.05  Aligned_cols=225  Identities=25%  Similarity=0.410  Sum_probs=185.0

Q ss_pred             eecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCchHH
Q psy5279         190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLH  269 (1310)
Q Consensus       190 ~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL~~  269 (1310)
                      +||+|.||+||-|+++.|....|||-|..+.....+-+..||.+.+.|+|.|||++++.+..++.+-|.||-++||+|..
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            59999999999999999999999999987777777778899999999999999999999999999999999999999999


Q ss_pred             Hhhhc-CCC--CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCCCcccch
Q psy5279         270 SLTRQ-SYY--TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLNPLEYDV  345 (1310)
Q Consensus       270 ~l~~~-~~l--sE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~~~~~t~  345 (1310)
                      .+... +.+  +|..+.+|.+||++||+|||++.|||||||-+|+|++.-. +.+||+|||-+|++..-+ ...++-||.
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTyS-GvlKISDFGTsKRLAginP~TETFTGTL  740 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYS-GVLKISDFGTSKRLAGINPCTETFTGTL  740 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeecc-ceEEecccccchhhccCCccccccccch
Confidence            88754 446  7889999999999999999999999999999999998654 579999999999875543 344678888


Q ss_pred             HHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCCccCCCcceecCCCCCCCCCC
Q psy5279         346 RYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEP  423 (1310)
Q Consensus       346 ~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp~~  423 (1310)
                      .|++     |++-               ++-..-|..+.| | +||+.+++.+.|+|.-+.. .|=+.-+..|.-.+-++
T Consensus       741 QYMA-----PEvI---------------DqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elg-spqAAMFkVGmyKvHP~  799 (1226)
T KOG4279|consen  741 QYMA-----PEVI---------------DQGPRGYGKAADIWSFGCTMVEMATGRPPFVELG-SPQAAMFKVGMYKVHPP  799 (1226)
T ss_pred             hhhC-----hHhh---------------ccCCcCCCchhhhhhccceeEeeccCCCCeeecC-ChhHhhhhhcceecCCC
Confidence            8886     4432               222234677777 7 8999999999999987753 34444455555556556


Q ss_pred             CCcceeccccccccc
Q psy5279         424 TPDKVLVSRDLRDVK  438 (1310)
Q Consensus       424 ~p~~i~v~~~~rD~~  438 (1310)
                      +|..  +|...+.|.
T Consensus       800 iPee--lsaeak~Fi  812 (1226)
T KOG4279|consen  800 IPEE--LSAEAKNFI  812 (1226)
T ss_pred             CcHH--HHHHHHHHH
Confidence            8888  666655443


No 388
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.92  E-value=1.2e-24  Score=242.92  Aligned_cols=151  Identities=24%  Similarity=0.362  Sum_probs=129.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcC----------------CCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcce
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERS----------------SGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVR  244 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~----------------Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVk  244 (1310)
                      .++|.+.++||+|+||.||+|.+..                ++..||+|++.... ......+.+|+.+|++++|||||+
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3678999999999999999998543                34579999987543 234556889999999999999999


Q ss_pred             EEEEEEeCCeEEEEEecCCCCchHHHhhhcC-------------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecC
Q psy5279         245 LHDSYETKDSFTIISELAGGGELLHSLTRQS-------------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLG  305 (1310)
Q Consensus       245 L~d~f~~~~~lyLVmEy~~GGeL~~~l~~~~-------------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRD  305 (1310)
                      +++++...+.+++||||+++|+|.+.+....                   .++...+..++.||+.||.|||++||+|||
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d  163 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD  163 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999999999999999998875421                   356678889999999999999999999999


Q ss_pred             CCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         306 LTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       306 LKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||+|||++.++  .+||+|||+++.+..
T Consensus       164 lkp~Nill~~~~--~~kl~DfG~~~~~~~  190 (304)
T cd05096         164 LATRNCLVGENL--TIKIADFGMSRNLYA  190 (304)
T ss_pred             cchhheEEcCCc--cEEECCCccceeccc
Confidence            999999998654  799999999987643


No 389
>KOG4279|consensus
Probab=99.92  E-value=5.5e-26  Score=267.83  Aligned_cols=352  Identities=18%  Similarity=0.256  Sum_probs=222.6

Q ss_pred             eecceeeeeeeCCEEEEEEe-ccCCCcceeeecccCCcccccccccC----CCchhHHHHHHHHHHHHHHHHHCCceecc
Q psy5279         897 REKPITIPVVIGDKLEMKCL-AVGEPKPVIQWFKLGTSTLCYLPIVI----PTTHKDAYCVTSVLDGLQYLHWRGLCHLN  971 (1310)
Q Consensus       897 rE~~~~~~l~~g~~l~~~~l-~~G~p~~vi~~f~~g~~l~~~L~~~i----~~~~~~~~i~~QIl~AL~yLHs~gIVHRD  971 (1310)
                      -|+.+--.+.|.+++++-.+ ..+--..+...-..||++-.+|....    ..+....|+-+||++||.|||++.|||||
T Consensus       621 EEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRD  700 (1226)
T KOG4279|consen  621 EEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRD  700 (1226)
T ss_pred             HHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeecc
Confidence            34444445566666654432 22222334444456778777775542    24556788999999999999999999999


Q ss_pred             cCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC--CCCCccchhHHHHHHHHHhcCCCCC
Q psy5279         972 IEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE--PIFPQTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus       972 LKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~--~ys~ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                      ||-+|+|++. -++.+||+|||.++++.... ..+..++||..|||||++..+  +|+.++|||||||.+.||.||++||
T Consensus       701 IKGDNVLvNT-ySGvlKISDFGTsKRLAgin-P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF  778 (1226)
T KOG4279|consen  701 IKGDNVLVNT-YSGVLKISDFGTSKRLAGIN-PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPF  778 (1226)
T ss_pred             ccCCcEEEee-ccceEEecccccchhhccCC-ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCe
Confidence            9999999985 35679999999998876433 334567899999999999866  5899999999999999999999999


Q ss_pred             CCCChhHHHhhhcccccc-ccccchhccHHHHHHHHHhccC-CcchhcHHhhhCCCcccccccccccccccccccccccC
Q psy5279        1050 RGQSEPETRQNVNFVRYR-FEYLFKELTQEATRFLMLIFKH-EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIG 1127 (1310)
Q Consensus      1050 ~g~~~~e~~~~I~~~~~~-f~~~~~~lS~eakdLL~~il~~-~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~ 1127 (1310)
                      .....+... ..+.+.|+ -|.+..++|.+|+.||.++|.+ +.+|.++.+.+..+|......+.......+-.......
T Consensus       779 ~ElgspqAA-MFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk~r~~ls~~ha~~~e~~  857 (1226)
T KOG4279|consen  779 VELGSPQAA-MFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKKPRPKLSLNHANQREML  857 (1226)
T ss_pred             eecCChhHh-hhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCCCCCCCCcccCCChhhc
Confidence            765444321 11223333 2456678999999999999874 56899999999999987764443222111100111111


Q ss_pred             Cccc-CCCccccc------ccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchh
Q psy5279        1128 WSEK-GIPSALFK------TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200 (1310)
Q Consensus      1128 ~s~~-~ips~lf~------~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~ 1200 (1310)
                      -|.. ..|...-+      -..++|.   ..|.++.++.=|.|-        .+|-....+..+             .-.
T Consensus       858 rS~S~Ptp~~vs~T~s~~f~~s~sp~---~~P~S~~t~~~s~~~--------vs~ir~p~e~~~-------------~s~  913 (1226)
T KOG4279|consen  858 RSISHPTPEPVSATLSAGFFSSSSPV---SQPSSPITRCTSHGH--------VSPIRSPLESAL-------------HSR  913 (1226)
T ss_pred             cccCCCCCcccccccccCccCCCCCc---cCCCCCCcccCCCCC--------cCCCCCcccchh-------------hcC
Confidence            1110 11111000      1224444   233444444333332        112211111000             113


Q ss_pred             ccCHHHHHHHHHhhhcCCCCCCCHHHhhcCC-------ccCC----ch---------hHHHHHHHHHHhhhhhhHhHHHH
Q psy5279        1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENR-------WLVP----SE---------YMIKKRERAVFLGNRLKEFSDEY 1260 (1310)
Q Consensus      1201 ~iS~eAkdfI~~lL~~dP~kRpTa~e~L~Hp-------Wl~~----~~---------~~~~~~~~~~~~~~~lk~~~~~~ 1260 (1310)
                      .+|++-++==.-||.+|-++|-|..++|+..       |-+.    ++         .+..+-++.+.++.--++.+++.
T Consensus       914 ~~s~ee~~S~~fmL~kdseRRasl~~~l~~e~d~i~~sl~tsl~q~se~~~l~r~~~e~llr~l~~~v~~~d~~kia~~l  993 (1226)
T KOG4279|consen  914 PISPEESSSGFFMLQKDSERRASLGQFLQDEKDLIIDSLSTSLIQQSETELLVRVHMEMLLRGLRDFVLKKDRTKIAKML  993 (1226)
T ss_pred             CCChhhcCCcceeeechhHHHHHHHHHhccchhhhhHHHHHHHHhccccchhHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            3566655545568999999999999988764       2110    11         23566778888888888999999


Q ss_pred             hhhh-ccccccchhhh
Q psy5279        1261 HDLK-NKQFTSDSLSS 1275 (1310)
Q Consensus      1261 ~~~~-~~~~~s~~~~~ 1275 (1310)
                      .||| .-++++-++.-
T Consensus       994 ~~lkg~ld~d~~~ia~ 1009 (1226)
T KOG4279|consen  994 DDLKGLLDADTAGIAQ 1009 (1226)
T ss_pred             HHHhhhccccccchhh
Confidence            9997 44555544443


No 390
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.92  E-value=2e-25  Score=249.23  Aligned_cols=156  Identities=23%  Similarity=0.368  Sum_probs=119.4

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.||+.||.|||++||+||||||+||+++.  +..+||+|||++........ ......+++.|+|||.+.+..++.++
T Consensus       123 ~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~  199 (292)
T cd06658         123 VCLSVLRALSYLHNQGVIHRDIKSDSILLTS--DGRIKLSDFGFCAQVSKEVP-KRKSLVGTPYWMAPEVISRLPYGTEV  199 (292)
T ss_pred             HHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEccCcchhhcccccc-cCceeecCccccCHHHHccCCCCchh
Confidence            4579999999999999999999999999975  45799999998865432111 11123467899999999988899999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccccc
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~~~ 1109 (1310)
                      |+|||||++|+|++|..||.+.+.......+..............+...++++.+|+. +|.+|+++.+++.|+|+....
T Consensus       200 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~  279 (292)
T cd06658         200 DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG  279 (292)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence            9999999999999999999887665544433221111111123467889999998886 567899999999999987543


No 391
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.92  E-value=5.8e-25  Score=241.67  Aligned_cols=147  Identities=27%  Similarity=0.438  Sum_probs=129.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||+|.++.+|+.||+|.+.....  .....+.+|+.+|++++||||+++++++.+.+.+|+|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            48899999999999999999999999999999865322  2334577899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.+ +|...+.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~--~~~l~dfg~~~~~~  150 (284)
T cd07839          81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG--ELKLADFGLARAFG  150 (284)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC--cEEECccchhhccC
Confidence            985 67666654 45699999999999999999999999999999999999998655  79999999998654


No 392
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.92  E-value=1.9e-25  Score=242.17  Aligned_cols=150  Identities=25%  Similarity=0.437  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||++||.|||++|++|+||||+||+++.  ...++|+|||++........  .....++..|+|||.+.+..++.
T Consensus       103 ~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~  178 (258)
T cd05578         103 KFWICEIVLALEYLHSKGIIHRDIKPDNILLDE--QGHVHITDFNIATKVTPDTL--TTSTSGTPGYMAPEVLCRQGYSV  178 (258)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC--CCCEEEeecccccccCCCcc--ccccCCChhhcCHHHHcccCCCC
Confidence            345679999999999999999999999999985  45699999998865533221  12234567899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh---hHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcH--HhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE---PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITL--ANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~---~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~--~e~L~H 1102 (1310)
                      ++|+|||||++|+|++|..||...+.   ...........   +.....++.++.++|.+|+. ++.+|++.  .+.+.|
T Consensus       179 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~  255 (258)
T cd05578         179 AVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETAD---VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH  255 (258)
T ss_pred             cccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccc---ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence            99999999999999999999998764   33332222112   22234577899999999886 56779999  899999


Q ss_pred             Ccc
Q psy5279        1103 EFW 1105 (1310)
Q Consensus      1103 ~f~ 1105 (1310)
                      +|+
T Consensus       256 ~~~  258 (258)
T cd05578         256 PYF  258 (258)
T ss_pred             CCC
Confidence            985


No 393
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.92  E-value=8.6e-26  Score=252.42  Aligned_cols=154  Identities=21%  Similarity=0.319  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.|++.||.|||+.||+||||||+|||++.  ++.+||+|||++........ ......+++.|+|||.+.+..++.++
T Consensus       120 ~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~--~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~  196 (297)
T cd06656         120 VCRECLQALDFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKV  196 (297)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEECcCccceEccCCcc-CcCcccCCccccCHHHHcCCCCCcHH
Confidence            4579999999999999999999999999975  45699999999875533221 11223467899999999998899999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      |+|||||++|+|++|..||.+.+.......+.............+++..++|+.+|+. ++.+|+++.+++.|+|+..
T Consensus       197 Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  274 (297)
T cd06656         197 DIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL  274 (297)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence            9999999999999999999876543322222111111111234577889999999986 5667999999999998863


No 394
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.92  E-value=2.8e-24  Score=237.84  Aligned_cols=149  Identities=32%  Similarity=0.476  Sum_probs=129.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .+.|.+.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+|+.+|+.++||||+++++++..++..|+|||
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            4679999999999999999999999999999999865432 233456789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+. ++|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~  154 (291)
T cd07870          84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG--ELKLADFGLARAKS  154 (291)
T ss_pred             ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC--cEEEeccccccccC
Confidence            996 566666543 34588889999999999999999999999999999999998655  79999999998643


No 395
>KOG0574|consensus
Probab=99.92  E-value=8.6e-27  Score=255.46  Aligned_cols=228  Identities=22%  Similarity=0.340  Sum_probs=180.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +-...|.++.+||+|+||.||+|.++.+|+.+|||.+...  .+...+..||.||++++.|.+|++|+.|-....+++||
T Consensus        30 ~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM  107 (502)
T KOG0574|consen   30 PPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM  107 (502)
T ss_pred             ChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence            4556788999999999999999999999999999998643  34566778999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-C
Q psy5279         260 ELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-K  337 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~  337 (1310)
                      |||.-|+..+.+..+ ..++|.++..+++..+.||+|||...-||||||..|||++.+|  +.||+|||.|..+.... .
T Consensus       108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G--~AKLADFGVAGQLTDTMAK  185 (502)
T KOG0574|consen  108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG--IAKLADFGVAGQLTDTMAK  185 (502)
T ss_pred             hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc--hhhhhhccccchhhhhHHh
Confidence            999999998888644 5699999999999999999999999999999999999998766  89999999998876532 4


Q ss_pred             CCCcccchHHHhh-------------------------hcCCCccccCCCCCCCCCCCcchhhhh---hhcccchhhchh
Q psy5279         338 LNPLEYDVRYVRQ-------------------------ALRHPWLNFADRKPTEDTPKLNTDALR---NYYNLYKDWYGN  389 (1310)
Q Consensus       338 l~~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~~~~~p~~~~~~~~---~~~~~~~D~~~~  389 (1310)
                      -++..|||-++++                         .++.|+-........++.|.-.+..++   .+.+..-||+..
T Consensus       186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~  265 (502)
T KOG0574|consen  186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRS  265 (502)
T ss_pred             hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHH
Confidence            4566677644332                         133333322222222333322222222   234555789999


Q ss_pred             hhhhhcccCCCCCCccCCCcce
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ++++....|-|+-+.++||++.
T Consensus       266 CLiK~PE~R~TA~~L~~H~Fik  287 (502)
T KOG0574|consen  266 CLIKKPEERKTALRLCEHTFIK  287 (502)
T ss_pred             HhcCCHHHHHHHHHHhhhhhhc
Confidence            9999999999999999999974


No 396
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.92  E-value=2e-25  Score=242.07  Aligned_cols=147  Identities=22%  Similarity=0.279  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++||+||||||+||+++.  +..+||+|||++...............++..|+|||++.+..++.+
T Consensus       104 ~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  181 (256)
T cd05114         104 SMCQDVCEGMEYLERNSFIHRDLAARNCLVSS--TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSK  181 (256)
T ss_pred             HHHHHHHHHHHHHHHCCccccccCcceEEEcC--CCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchh
Confidence            45679999999999999999999999999975  4579999999887543222211122233457999999998889999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccC-CcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKH-EVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~-~~~rit~~e~L 1100 (1310)
                      +|+|||||++|+|++ |..||.+.+..+....+......  ......+.+..+++.+++.. |.+|+++.+++
T Consensus       182 ~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~  252 (256)
T cd05114         182 SDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL--YRPKLASMTVYEVMYSCWHEKPEGRPTFAELL  252 (256)
T ss_pred             hhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            999999999999999 99999988877776666543221  11234577899999998875 56788888765


No 397
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.92  E-value=1.9e-25  Score=241.54  Aligned_cols=152  Identities=16%  Similarity=0.275  Sum_probs=122.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||+.|++|+||||+||+++.  ...+||+|||++........ ......+++.|+|||.+.+..++.
T Consensus       104 ~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~--~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~  180 (256)
T cd08221         104 LWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK--AGLIKLGDFGISKILGSEYS-MAETVVGTPYYMSPELCQGVKYNF  180 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCccccCCChHhEEEeC--CCCEEECcCcceEEcccccc-cccccCCCccccCHhhcCCCCCCC
Confidence            345679999999999999999999999999986  45699999999876533221 112234678999999998888889


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW 1105 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~ 1105 (1310)
                      ++|+|||||++|+|++|..||.+.+..+....+....+.  ......+.+.++++.+++. ++.+|+++.+.+.|+|.
T Consensus       181 ~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         181 KSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYT--PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             cchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            999999999999999999999988777766665543332  2235678899999999885 67789999999999873


No 398
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.92  E-value=1.6e-24  Score=274.28  Aligned_cols=233  Identities=21%  Similarity=0.284  Sum_probs=169.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEe--CCeE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYET--KDSF  255 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~~l  255 (1310)
                      .+.+.|++.+.||+|+||.||+|.++.+++.||+|++....  ......+.+|+.+|++|+|||||+++++|..  ...+
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            45678999999999999999999999999999999987543  2345568899999999999999999998854  4579


Q ss_pred             EEEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhC-------CeeecCCCCCCEEeecC--------
Q psy5279         256 TIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRL-------SIAHLGLTPGDLLVAHP--------  316 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~-------gIVHRDLKPeNILL~~~--------  316 (1310)
                      |||||||.+|+|.+.+..    .+.+++..+..++.||+.||.|||+.       +||||||||+||||+..        
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence            999999999999988864    24699999999999999999999984       59999999999999642        


Q ss_pred             -------CCCeEEEEeeccceeecCCCCCCCcccchHHHhhhcCC----Cc------cccC-------CCCCCCCCCCcc
Q psy5279         317 -------GGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRH----PW------LNFA-------DRKPTEDTPKLN  372 (1310)
Q Consensus       317 -------~~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~~~~r~----P~------l~~~-------~~~~~~~~p~~~  372 (1310)
                             +...+||+|||+|+.+.........++|+.|+++....    ++      +.|+       ...+++.... .
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-~  248 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-N  248 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-c
Confidence                   22358999999998775444444445666555432110    00      0000       0001110000 0


Q ss_pred             hhhh------------hhhcccchhhchhhhhhhcccCCCCCCccCCCcceec
Q psy5279         373 TDAL------------RNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       373 ~~~~------------~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                      ..++            ......+.|++...+..+...|+++.+||.|||+...
T Consensus       249 ~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        249 FSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             HHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            0111            0112234556666666678899999999999997533


No 399
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.92  E-value=1.9e-25  Score=242.98  Aligned_cols=152  Identities=25%  Similarity=0.400  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-----ccccCCCCCCcccccccccCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-----LIHPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-----~~~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      .++.|++.||+|||++|++||||||+|||++.  +..+||+|||+++.......     .......+++.|+|||.+.+.
T Consensus       110 ~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  187 (267)
T cd06628         110 NFVRQILKGLNYLHNRGIIHRDIKGANILVDN--KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT  187 (267)
T ss_pred             HHHHHHHHHHHHHHhcCcccccCCHHHEEEcC--CCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccC
Confidence            34679999999999999999999999999975  45699999999876542111     011123466889999999988


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHE 1103 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~ 1103 (1310)
                      .++.++|+|||||++|+|++|..||.+.+.......+..  ...+.....++.+++++|.+|+. ++.+|+++.+++.|+
T Consensus       188 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  265 (267)
T cd06628         188 SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE--NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHP  265 (267)
T ss_pred             CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc--cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCC
Confidence            899999999999999999999999987665444433322  12223334678899999999887 567899999999999


Q ss_pred             cc
Q psy5279        1104 FW 1105 (1310)
Q Consensus      1104 f~ 1105 (1310)
                      |+
T Consensus       266 ~~  267 (267)
T cd06628         266 FL  267 (267)
T ss_pred             CC
Confidence            85


No 400
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.92  E-value=1.7e-25  Score=244.44  Aligned_cols=153  Identities=24%  Similarity=0.324  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCCCC
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ++.|++.||.|||++||+||||||+||+++.  +..+||+|||++........  .......++..|+|||.+.+..++.
T Consensus       111 ~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  188 (266)
T cd06651         111 YTRQILEGMSYLHSNMIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGR  188 (266)
T ss_pred             HHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCc
Confidence            4679999999999999999999999999975  45699999999875432110  0111123568899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWH 1106 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~ 1106 (1310)
                      ++|+||+||++|+|++|..||......+....+..... -+.....+++.+++++..++.++.+|+++.+++.|+|+.
T Consensus       189 ~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         189 KADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPT-NPQLPSHISEHARDFLGCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             hhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCC-CCCCchhcCHHHHHHHHHhcCChhhCcCHHHHhcCcccc
Confidence            99999999999999999999987655544433322111 122234578889999987778889999999999999974


No 401
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.92  E-value=1.9e-25  Score=243.49  Aligned_cols=153  Identities=23%  Similarity=0.321  Sum_probs=119.2

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCCCC
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ++.|++.||.|||++||+|+||||+|||++.  +..+||+|||++........  .......++..|+|||++.+..++.
T Consensus       111 ~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  188 (265)
T cd06652         111 YTRQILEGVSYLHSNMIVHRDIKGANILRDS--VGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGR  188 (265)
T ss_pred             HHHHHHHHHHHHHhCCEecCCCCHHHEEecC--CCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCc
Confidence            4569999999999999999999999999975  45799999998875432110  0111234678899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWH 1106 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~ 1106 (1310)
                      ++|+|||||++|+|++|..||...........+.... ..+.....++..+.++|.+++.++.+|+++.+++.|+|..
T Consensus       189 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         189 KADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP-TNPVLPPHVSDHCRDFLKRIFVEAKLRPSADELLRHTFVH  265 (265)
T ss_pred             chhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCC-CCCCCchhhCHHHHHHHHHHhcChhhCCCHHHHhcCcccC
Confidence            9999999999999999999998765544443332221 1223345678889999999888888999999999999863


No 402
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.92  E-value=2e-24  Score=232.56  Aligned_cols=150  Identities=28%  Similarity=0.509  Sum_probs=134.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-----chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-----QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-----~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +|+..+.||+|+||+||+|....+++.||+|.+.....     ...+.+.+|+.+|+.++||||+++++++.....+|+|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            46778999999999999999999999999999865331     2345688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |||++|++|.+.+.+...+++..+..++.||+.||.|||++||+|+||||+||+++.++  .+||+|||+++.....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--~~kl~d~~~~~~~~~~  155 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--VVKLADFGMAKQVVEF  155 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEccCccceecccc
Confidence            99999999999988777799999999999999999999999999999999999998654  7999999999876543


No 403
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.92  E-value=3.5e-25  Score=253.44  Aligned_cols=151  Identities=23%  Similarity=0.290  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||++..+..... .......+++.|+|||++.+..+
T Consensus       175 ~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  252 (337)
T cd05054         175 LISYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVY  252 (337)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCC
Confidence            4567789999999999999999999999999985  45799999999876532221 11122334568999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHH-hhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETR-QNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~-~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+....+.. ..+... .. .......+++..+++.+++. .+.+|+++.+++.|
T Consensus       253 ~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         253 TTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEG-TR-MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             CccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhcc-CC-CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999997 99999875443322 222211 11 11223567889999998886 66789999887754


No 404
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.92  E-value=1.4e-25  Score=242.32  Aligned_cols=100  Identities=27%  Similarity=0.446  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||+ +|++||||+|+||+++.  ...++|+|||++.......... ....++..|+|||.+....++.
T Consensus       103 ~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~--~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~  179 (264)
T cd06623         103 YIARQILKGLDYLHTKRHIIHRDIKPSNLLINS--KGEVKIADFGISKVLENTLDQC-NTFVGTVTYMSPERIQGESYSY  179 (264)
T ss_pred             HHHHHHHHHHHHHhccCCCccCCCCHHHEEECC--CCCEEEccCccceecccCCCcc-cceeecccccCHhhhCCCCCCc
Confidence            346699999999999 99999999999999976  5679999999887654322211 1223567899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+||||+++|+|++|..||...
T Consensus       180 ~~Dv~slG~il~~l~tg~~p~~~~  203 (264)
T cd06623         180 AADIWSLGLTLLECALGKFPFLPP  203 (264)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCccc
Confidence            999999999999999999999654


No 405
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.92  E-value=5.2e-25  Score=248.31  Aligned_cols=97  Identities=30%  Similarity=0.451  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||+|+||+++.  +..+||+|||++......     ....+++.|+|||.+.   ...
T Consensus       128 ~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~--~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~  200 (317)
T cd06635         128 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASIASPA-----NSFVGTPYWMAPEVILAMDEGQ  200 (317)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCcccEEECC--CCCEEEecCCCccccCCc-----ccccCCccccChhhhhcCCCCC
Confidence            345679999999999999999999999999975  457999999987643321     1234678899999974   456


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++.++|+|||||++|+|++|..||.+.
T Consensus       201 ~~~~~Dv~slGvil~el~~g~~p~~~~  227 (317)
T cd06635         201 YDGKVDVWSLGITCIELAERKPPLFNM  227 (317)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            788999999999999999999999654


No 406
>KOG0986|consensus
Probab=99.92  E-value=9.2e-26  Score=258.42  Aligned_cols=199  Identities=25%  Similarity=0.403  Sum_probs=168.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|..-++||+|+||.||-|..+.||++||+|.+.++..   +......+|-.||.+++.|.||.|-.+|++++.++|||
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            557788999999999999999999999999998876532   23445678999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         260 ELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ..|.||+|--+|-..+  .|+|..+++|++||+.||++||+.+||.|||||+|||+|+.|  +|+|+|.|||-.+.....
T Consensus       265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G--hvRISDLGLAvei~~g~~  342 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG--HVRISDLGLAVEIPEGKP  342 (591)
T ss_pred             EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--CeEeeccceEEecCCCCc
Confidence            9999999988886665  699999999999999999999999999999999999998776  899999999999887766


Q ss_pred             CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCC
Q psy5279         338 LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGT  417 (1310)
Q Consensus       338 l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~  417 (1310)
                      ...-+||..|++     |++.-+                 ..|++..||++.             .|+....+.+-.|+.
T Consensus       343 ~~~rvGT~GYMA-----PEvl~n-----------------e~Y~~s~Dwf~l-------------GCllYemi~G~sPFr  387 (591)
T KOG0986|consen  343 IRGRVGTVGYMA-----PEVLQN-----------------EVYDFSPDWFSL-------------GCLLYEMIAGHSPFR  387 (591)
T ss_pred             cccccCcccccC-----HHHHcC-----------------CcccCCccHHHH-------------HhHHHHHHcccCchh
Confidence            666689999986     444311                 226777899777             666666665555544


Q ss_pred             C
Q psy5279         418 Q  418 (1310)
Q Consensus       418 ~  418 (1310)
                      +
T Consensus       388 ~  388 (591)
T KOG0986|consen  388 Q  388 (591)
T ss_pred             h
Confidence            3


No 407
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.92  E-value=6.8e-25  Score=241.77  Aligned_cols=148  Identities=24%  Similarity=0.351  Sum_probs=132.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.+.... ......+.+|+.+|++++||||+++++.+...+.+|+||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            46889999999999999999999999999999886542 23345688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc---CCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         262 AGGGELLHSLTRQ---SYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       262 ~~GGeL~~~l~~~---~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ++|++|...+...   ..+++..+..++.||+.||.|||+ .||+||||||+|||++.++  .+||+|||+++.+
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~  153 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--QVKLCDFGVSGNL  153 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--CEEEeecCCcccc
Confidence            9999998877653   368999999999999999999996 5999999999999998744  7999999999765


No 408
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.92  E-value=1.1e-24  Score=236.32  Aligned_cols=150  Identities=25%  Similarity=0.462  Sum_probs=136.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||.||+|.+..+++.||+|++.+...   ...+.+.+|++++++++||||+++++.+..++.+|+|||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            48899999999999999999999999999999975432   334568899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |+.|++|...+.....+++..+..++.||++||.|||++||+|+||||+|||++.++  .+||+|||++......
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~l~d~~~~~~~~~~  153 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG--HVHITDFNIATKVTPD  153 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC--CEEEeecccccccCCC
Confidence            999999999998777899999999999999999999999999999999999998765  7999999999876543


No 409
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.92  E-value=1.1e-24  Score=238.63  Aligned_cols=150  Identities=26%  Similarity=0.437  Sum_probs=135.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++..+..+|+|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            46889999999999999999999999999999987543 23345678999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +++++|.+.+... .+++..+..++.|++.||.|||++||+||||+|+||+++.++  .++|+|||+++.+...
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d~g~~~~~~~~  151 (274)
T cd06609          81 CGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG--DVKLADFGVSGQLTST  151 (274)
T ss_pred             eCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEcccccceeeccc
Confidence            9999999988754 789999999999999999999999999999999999998755  7999999999887543


No 410
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.92  E-value=2.6e-25  Score=242.00  Aligned_cols=153  Identities=24%  Similarity=0.418  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC-----cccccCCCCCCcccccccccCCC
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-----TLIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-----~~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ++.|++.||.|||+.||+|+||||+||+++.  +..+||+|||++......+     ........+++.|+|||.+.+..
T Consensus       107 ~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  184 (265)
T cd06631         107 YTKQILDGVAYLHNNCVVHRDIKGNNVMLMP--NGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESG  184 (265)
T ss_pred             HHHHHHHHHHHHHhCCcccCCcCHHhEEECC--CCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCC
Confidence            4569999999999999999999999999975  4579999999886542111     11112234678999999999988


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCc
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEF 1104 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f 1104 (1310)
                      ++.++|+|||||++|+|++|..||...+.......+.......+......+.++.+|+.+++. ++.+|+++.+.+.|+|
T Consensus       185 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~  264 (265)
T cd06631         185 YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF  264 (265)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence            999999999999999999999999876654443333332222333445678999999999885 6788999999999998


Q ss_pred             c
Q psy5279        1105 W 1105 (1310)
Q Consensus      1105 ~ 1105 (1310)
                      +
T Consensus       265 ~  265 (265)
T cd06631         265 L  265 (265)
T ss_pred             C
Confidence            5


No 411
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.92  E-value=1.7e-24  Score=233.19  Aligned_cols=149  Identities=28%  Similarity=0.471  Sum_probs=135.3

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|..+.+++.||+|.+.....  .+.+.+|+.+++.++||||+++++.+.....+|+++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            3678999999999999999999999999999999875432  56788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +++++|.+.+... ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++  .+||+|||++..+..
T Consensus        80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~--~~~l~dfg~~~~~~~  151 (256)
T cd06612          80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG--QAKLADFGVSGQLTD  151 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC--cEEEcccccchhccc
Confidence            9999999988653 4589999999999999999999999999999999999998655  799999999987654


No 412
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.92  E-value=2.5e-25  Score=246.11  Aligned_cols=99  Identities=28%  Similarity=0.387  Sum_probs=75.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC--CCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE--PIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~--~ys 1027 (1310)
                      .++.||+.||.|||++|++||||||+|||++.  ++.+||+|||++...............|++.|+|||.+...  .++
T Consensus       109 ~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  186 (290)
T cd05613         109 IYSGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHD  186 (290)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHHeEECC--CCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCC
Confidence            34569999999999999999999999999985  46799999999865432221111223456789999987653  456


Q ss_pred             CccchhHHHHHHHHHhcCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      .++|+|||||++|+|++|..||.
T Consensus       187 ~~~Dv~slG~~l~~ll~g~~p~~  209 (290)
T cd05613         187 KAVDWWSMGVLMYELLTGASPFT  209 (290)
T ss_pred             ccccHHHHHHHHHHHhcCCCCCC
Confidence            77888888888888888887763


No 413
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.92  E-value=2.4e-25  Score=241.73  Aligned_cols=147  Identities=19%  Similarity=0.338  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||+|||++|++||||||+||+++.  +..+||+|||++...............++..|+|||.+.+..++.+
T Consensus       107 ~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  184 (261)
T cd05072         107 DFSAQIAEGMAYIERKNYIHRDLRAANVLVSE--SLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK  184 (261)
T ss_pred             HHHHHHHHHHHHHHHCCeeccccchhhEEecC--CCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChh
Confidence            34679999999999999999999999999985  4579999999987654322211122234567999999998889999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +|+|||||++|+|++ |..||.+.........+... ...+ ....++.+..+++.+|+. ++.+|+++.+.+
T Consensus       185 ~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  255 (261)
T cd05072         185 SDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRMP-RMENCPDELYDIMKTCWKEKAEERPTFDYLQ  255 (261)
T ss_pred             hhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCC-CCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            999999999999998 99999988776665554432 2222 224577899999999886 567788887654


No 414
>KOG1989|consensus
Probab=99.92  E-value=1.2e-25  Score=275.20  Aligned_cols=85  Identities=21%  Similarity=0.458  Sum_probs=70.6

Q ss_pred             cchhhc---ccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhccCHHHHHHHHHhhhcCCC
Q psy5279        1143 QAPEVL---AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPG 1219 (1310)
Q Consensus      1143 qAPEVl---~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~ 1219 (1310)
                      -|||++   .+.+++.++|||+||||+|-|+....||.....    ..|..++|.||.+ +..|...++||+.||+.||.
T Consensus       222 RsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~  296 (738)
T KOG1989|consen  222 RSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPD  296 (738)
T ss_pred             cChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcc
Confidence            456655   356788889999999999999999999976544    4688899999864 67899999999999999999


Q ss_pred             CCCCHHHhhcCCc
Q psy5279        1220 KRPTVEECHENRW 1232 (1310)
Q Consensus      1220 kRpTa~e~L~HpW 1232 (1310)
                      +||++.|++++-.
T Consensus       297 ~RPnI~Qv~~~~~  309 (738)
T KOG1989|consen  297 ERPNIYQVLEEIF  309 (738)
T ss_pred             cCCCHHHHHHHHH
Confidence            9999999987644


No 415
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.92  E-value=4.4e-25  Score=240.83  Aligned_cols=148  Identities=21%  Similarity=0.320  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++|++||||||+|||++.  +..+||+|||++...............+++.|+|||.+.+..++.+
T Consensus       108 ~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  185 (263)
T cd05052         108 YMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK  185 (263)
T ss_pred             HHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCch
Confidence            45679999999999999999999999999975  4569999999987654322111111223467999999999999999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +|||||||++|+|++ |..||.+.+..+....+... ++. .....++.++.+++.+++. +|.+|+++.+.++
T Consensus       186 ~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         186 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-YRM-ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CCC-CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            999999999999998 99999988776665555432 111 1234578899999999987 5678998887653


No 416
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.92  E-value=2.7e-25  Score=241.58  Aligned_cols=149  Identities=23%  Similarity=0.332  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  ++.+||+|||+++..............++..|+|||.+.+..++.
T Consensus       103 ~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~  180 (256)
T cd05059         103 LDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE--DNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSS  180 (256)
T ss_pred             HHHHHHHHHHHHHHHHCCcccccccHhhEEECC--CCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCc
Confidence            345679999999999999999999999999985  456999999998754322111111111234799999999999999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|+|||||++|+|++ |..||.+.+..+....+... ... ......+.+..+++.+|+. ++.+|+++.+++.
T Consensus       181 ~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~  253 (256)
T cd05059         181 KSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-YRL-YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS  253 (256)
T ss_pred             hhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-CcC-CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999998 89999887776665555432 111 1224578899999999886 6778999888764


No 417
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.92  E-value=1.7e-25  Score=245.22  Aligned_cols=147  Identities=16%  Similarity=0.243  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||+|||++|++||||||+|||++.  +..+|++|||.+.............+.+++.|+|||++.+..++.+
T Consensus       111 ~~~~~i~~al~~lH~~~iiH~dikp~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  188 (266)
T cd05064         111 GMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS--DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSA  188 (266)
T ss_pred             HHHHHHHHHHHHHHHCCEeeccccHhhEEEcC--CCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccch
Confidence            35679999999999999999999999999975  5579999999875432211112223344578999999999999999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +|||||||++|+|++ |..||.+.+..+....+.... ..+ ....++....+++..++. ++.+|++..+++
T Consensus       189 ~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~  259 (266)
T cd05064         189 SDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-RLP-APRNCPNLLHQLMLDCWQKERGERPRFSQIH  259 (266)
T ss_pred             hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-CCC-CCCCCCHHHHHHHHHHcCCCchhCCCHHHHH
Confidence            999999999999775 999999888777666554331 222 234577889999998886 567788887654


No 418
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.92  E-value=1.4e-24  Score=236.25  Aligned_cols=146  Identities=25%  Similarity=0.471  Sum_probs=130.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      +|.+.+.||+|+||.||+|.. .+|+.+|+|.+.....      .....+.+|+.+|+.++||||+++++++...+.+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            477889999999999999975 5889999999864321      122457889999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||||++|++|.+.+.+...+++..+..++.|++.||+|||+.||+|+||||+|||+++++  .+||+|||+++..
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~  152 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG--IIKLIDFGCARRL  152 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC--eEEeccchhhHhh
Confidence            999999999999998777899999999999999999999999999999999999998655  7999999999865


No 419
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.92  E-value=2.7e-24  Score=238.47  Aligned_cols=151  Identities=28%  Similarity=0.440  Sum_probs=128.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----  253 (1310)
                      .-++|++.+.||+|+||.||+|.+..+|+.||||.+....  ......+.+|+.++++++||||+++++++...+     
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence            3467999999999999999999999999999999886432  222344668999999999999999999987654     


Q ss_pred             ---eEEEEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         254 ---SFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       254 ---~lyLVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                         ..++||||+.+ +|...+.... .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++
T Consensus        90 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~  166 (310)
T cd07865          90 YKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDG--ILKLADFGLA  166 (310)
T ss_pred             CCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCC--cEEECcCCCc
Confidence               45999999975 6776665443 589999999999999999999999999999999999998655  7999999999


Q ss_pred             eeecC
Q psy5279         330 RRITS  334 (1310)
Q Consensus       330 r~i~~  334 (1310)
                      +....
T Consensus       167 ~~~~~  171 (310)
T cd07865         167 RAFSL  171 (310)
T ss_pred             ccccC
Confidence            87643


No 420
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.92  E-value=2e-24  Score=235.96  Aligned_cols=148  Identities=28%  Similarity=0.467  Sum_probs=131.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-----chHHHHHHHHHHHHhcCCCCcceEEEEEEe--CCeEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-----QYKSLFKNELDIMNQLCHRNLVRLHDSYET--KDSFT  256 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-----~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~~ly  256 (1310)
                      .|...+.||+|+||.||+|.+..+|+.||+|++.....     .....+.+|+.+|+.++||||+++++++..  ...++
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            57889999999999999999999999999998864321     223457889999999999999999999876  36789


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++|||+++++|.+.+...+.+++.....++.|++.||+|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~--~~~l~dfg~~~~~~  157 (266)
T cd06651          83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG--NVKLGDFGASKRLQ  157 (266)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--CEEEccCCCccccc
Confidence            9999999999999998777799999999999999999999999999999999999997654  79999999998653


No 421
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.91  E-value=2.1e-24  Score=234.03  Aligned_cols=151  Identities=26%  Similarity=0.446  Sum_probs=133.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCC------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKD------  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~------  253 (1310)
                      ..++|++.+.||+|+||.||+|.++.+++.+|+|++..... ..+.+.+|+.+++++ +||||++++++|....      
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            45889999999999999999999999999999999875433 345688999999999 7999999999997655      


Q ss_pred             eEEEEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         254 SFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      .+|+||||+++++|.+.+..    ...+++..+..++.|++.||.|||++||+|+||+|+||+++.++  .+||+|||++
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~--~~~l~d~~~~  160 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA--EVKLVDFGVS  160 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCC--eEEECCCccc
Confidence            48999999999999887754    34689999999999999999999999999999999999998654  7999999999


Q ss_pred             eeecC
Q psy5279         330 RRITS  334 (1310)
Q Consensus       330 r~i~~  334 (1310)
                      .....
T Consensus       161 ~~~~~  165 (275)
T cd06608         161 AQLDS  165 (275)
T ss_pred             eeccc
Confidence            87543


No 422
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.91  E-value=7.4e-25  Score=235.84  Aligned_cols=154  Identities=24%  Similarity=0.411  Sum_probs=122.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------ccccCCCCCCccccccccc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-------LIHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-------~~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      .++.||+.||.|||++|++|+||+|+||+++.  +..+||+|||++........       .......+++.|+|||.+.
T Consensus        97 ~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  174 (265)
T cd05579          97 IYIAEIVLALEYLHSNGIIHRDLKPDNILIDS--NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVIL  174 (265)
T ss_pred             HHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC--CCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhc
Confidence            34679999999999999999999999999986  45699999998764432211       1122234567899999998


Q ss_pred             CCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcH---Hh
Q psy5279        1023 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITL---AN 1098 (1310)
Q Consensus      1023 ~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~---~e 1098 (1310)
                      ...++.++|+|||||++|+|++|..||......+....+......++... .++.++.+|+.+|+. ++..|+++   .+
T Consensus       175 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~  253 (265)
T cd05579         175 GQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDV-EVSDEAIDLISKLLVPDPEKRLGAKSIEE  253 (265)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccc-cCCHHHHHHHHHHhcCCHhhcCCCccHHH
Confidence            88888999999999999999999999998887777666655444443321 258899999999886 56678888   89


Q ss_pred             hhCCCccc
Q psy5279        1099 NIDHEFWH 1106 (1310)
Q Consensus      1099 ~L~H~f~~ 1106 (1310)
                      .+.|+||.
T Consensus       254 ~l~~~~~~  261 (265)
T cd05579         254 IKNHPFFK  261 (265)
T ss_pred             HhcCcccc
Confidence            99999986


No 423
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.91  E-value=7.8e-25  Score=246.81  Aligned_cols=98  Identities=30%  Similarity=0.464  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.||+.||.|||++||+|+||||+||+++.  +..+||+|||++......     ....+++.|+|||.+.   ...
T Consensus       124 ~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~--~~~~kL~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~  196 (313)
T cd06633         124 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASKSSPA-----NSFVGTPYWMAPEVILAMDEGQ  196 (313)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCChhhEEECC--CCCEEEeecCCCcccCCC-----CCccccccccChhhccccCCCC
Confidence            345779999999999999999999999999975  456999999987543211     2234678899999984   355


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++.++|+|||||++|+|++|..||.+.+
T Consensus       197 ~~~~sDv~slGvil~el~~g~~p~~~~~  224 (313)
T cd06633         197 YDGKVDVWSLGITCIELAERKPPLFNMN  224 (313)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            7889999999999999999999997653


No 424
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.91  E-value=3.1e-24  Score=234.41  Aligned_cols=145  Identities=30%  Similarity=0.465  Sum_probs=129.7

Q ss_pred             eceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       188 ~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ...||+|+||.||+|.++.++..||+|.+..........+.+|+.+++.++||||+++++++..++.+++||||++|++|
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   92 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSL   92 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCH
Confidence            35799999999999999999999999998766555566788999999999999999999999999999999999999999


Q ss_pred             HHHhhhc-CCC--CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         268 LHSLTRQ-SYY--TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       268 ~~~l~~~-~~l--sE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+.+... ..+  ++..+..++.||+.||.|||++||+||||||+|||++.+. ..+||+|||++..+.
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~-~~~~l~dfg~~~~~~  160 (268)
T cd06624          93 SALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYS-GVVKISDFGTSKRLA  160 (268)
T ss_pred             HHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-CeEEEecchhheecc
Confidence            9988754 345  7888999999999999999999999999999999997533 479999999998664


No 425
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.91  E-value=2.9e-25  Score=243.96  Aligned_cols=151  Identities=15%  Similarity=0.259  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........ .......+++.|+|||.+.+..+
T Consensus       126 ~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~--~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05048         126 FLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE--GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccccccceEEEcC--CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcC
Confidence            3456789999999999999999999999999975  45699999999875432211 11122234678999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|+|||||++|+|++ |..||.+.+..+....+.....  +.....++++..+++..++. ++.+|+++.+++.+
T Consensus       204 ~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         204 TTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQL--LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             chhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999998 9999999888777766654322  12235678999999999887 56789998887643


No 426
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.91  E-value=1.7e-24  Score=233.34  Aligned_cols=150  Identities=21%  Similarity=0.378  Sum_probs=134.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .|.+.+.||+|+||.||+|.++.+|+.||+|.+....  ......+.+|+.+|+.++||||+++++++...+..|+||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            3788899999999999999999999999999986532  33456688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++|++|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+++.+...
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~--~~~l~df~~~~~~~~~  154 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD--NVKIGDLGVAKLLSDN  154 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC--CEEEcccccceeccCc
Confidence            9999999988653  4589999999999999999999999999999999999998655  7999999999977543


No 427
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.91  E-value=1.2e-24  Score=247.19  Aligned_cols=151  Identities=27%  Similarity=0.469  Sum_probs=132.3

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEe----CCe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYET----KDS  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~----~~~  254 (1310)
                      +.+.|++.+.||+|+||.||+|.++.+|+.||+|++.....  .....+.+|+.+|+.++||||++++++|..    ...
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence            45789999999999999999999999999999999875422  334557789999999999999999998863    357


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +|+||||+. |+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~  159 (334)
T cd07855          83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--ELRIGDFGMARGLSS  159 (334)
T ss_pred             EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEecccccceeecc
Confidence            899999996 58888887777799999999999999999999999999999999999998655  799999999987643


No 428
>KOG0986|consensus
Probab=99.91  E-value=1.4e-24  Score=248.71  Aligned_cols=229  Identities=18%  Similarity=0.269  Sum_probs=161.0

Q ss_pred             cchhhhhhhcc-cCCC-chhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCccccc
Q psy5279         860 DTYTLRRLRHE-IGTR-PEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCY  937 (1310)
Q Consensus       860 ~~~~~~~l~~e-~~~~-~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~  937 (1310)
                      +-||+|+|-+. ++.+ .......|++|.++...  +|.+-+-.-.+-.....             ++--+.+|+++..-
T Consensus       211 KMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s--~FiVslaYAfeTkd~LC-------------lVLtlMNGGDLkfH  275 (591)
T KOG0986|consen  211 KMYACKKLDKKRIKKRKGETMALNEKQILEKVSS--PFIVSLAYAFETKDALC-------------LVLTLMNGGDLKFH  275 (591)
T ss_pred             hhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc--CcEEEEeeeecCCCceE-------------EEEEeecCCceeEE
Confidence            44677766644 4333 33455588888887653  34332222111111111             23334455555544


Q ss_pred             ccc---cCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCc
Q psy5279         938 LPI---VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014 (1310)
Q Consensus       938 L~~---~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~ 1014 (1310)
                      +-.   ....+..+.+++.+|++||++||.++||.|||||+|||+++  .++|+|+|+|+|..+......  ....||..
T Consensus       276 iyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd--~GhvRISDLGLAvei~~g~~~--~~rvGT~G  351 (591)
T KOG0986|consen  276 IYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDD--HGHVRISDLGLAVEIPEGKPI--RGRVGTVG  351 (591)
T ss_pred             eeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeecc--CCCeEeeccceEEecCCCCcc--ccccCccc
Confidence            422   24567788999999999999999999999999999999986  567999999999887653332  22378899


Q ss_pred             ccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChh----HHHhhhccccccccccchhccHHHHHHHHHhccCC
Q psy5279        1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP----ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHE 1090 (1310)
Q Consensus      1015 Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~----e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~ 1090 (1310)
                      |||||++.++.|+.++|+|||||++|+|+.|+.||....+.    ++.+.+.....+++   ...|++|++++..+|..+
T Consensus       352 YMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~---~kFS~eakslc~~LL~Kd  428 (591)
T KOG0986|consen  352 YMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS---DKFSEEAKSLCEGLLTKD  428 (591)
T ss_pred             ccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc---cccCHHHHHHHHHHHccC
Confidence            99999999999999999999999999999999999875443    33444444444444   578999999999888654


Q ss_pred             -cchh-----cHHhhhCCCccccccc
Q psy5279        1091 -VDWI-----TLANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1091 -~~ri-----t~~e~L~H~f~~~~~l 1110 (1310)
                       .+|.     ...+...|+||...+.
T Consensus       429 p~~RLGcrg~ga~evk~HpfFk~lnw  454 (591)
T KOG0986|consen  429 PEKRLGCRGEGAQEVKEHPFFKDLNW  454 (591)
T ss_pred             HHHhccCCCcCcchhhhCcccccCCH
Confidence             4443     4467788999886444


No 429
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.91  E-value=3.8e-25  Score=241.42  Aligned_cols=151  Identities=24%  Similarity=0.320  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC--cccccCCCCCCcccccccccCCCCCC
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG--TLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g--~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ++.||+.||.|||++|++||||||+||+++.  +..++|+|||+++......  ........+++.|+|||.+.+..++.
T Consensus       111 ~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  188 (264)
T cd06653         111 YTRQILQGVSYLHSNMIVHRDIKGANILRDS--AGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGR  188 (264)
T ss_pred             HHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCc
Confidence            4569999999999999999999999999975  4569999999987543210  00111234678899999999888899


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEF 1104 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f 1104 (1310)
                      ++|+|||||++|+|++|..||...........+.... ..+.....+++++++++.+++..+..|++..+.+.|+|
T Consensus       189 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~i~~~l~~~~~r~~~~~~~~~~~  263 (264)
T cd06653         189 KADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQP-TKPMLPDGVSDACRDFLKQIFVEEKRRPTAEFLLRHPF  263 (264)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCC-CCCCCCcccCHHHHHHHHHHhcCcccCccHHHHhcCCC
Confidence            9999999999999999999998776555444333221 12234467889999999999998899999999999987


No 430
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.91  E-value=4.1e-24  Score=238.96  Aligned_cols=144  Identities=24%  Similarity=0.439  Sum_probs=118.6

Q ss_pred             eceecccCceEEEEEEEcC--CCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEE--eCCeEEEEEecCC
Q psy5279         188 GDELGRGVTGIVYHAVERS--SGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE--TKDSFTIISELAG  263 (1310)
Q Consensus       188 ~~~LG~GsFG~Vyka~~k~--Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~--~~~~lyLVmEy~~  263 (1310)
                      ..+||+|+||.||+|..+.  +++.||+|.+....  ....+.+|+.+|+.++||||++++++|.  ....+++||||+.
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            4679999999999999764  66899999986543  2345678999999999999999999985  4567899999988


Q ss_pred             CCchHHHhhh---------cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC--CCCeEEEEeeccceee
Q psy5279         264 GGELLHSLTR---------QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       264 GGeL~~~l~~---------~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~--~~~~VKLsDFGLAr~i  332 (1310)
                      + +|.+.+..         ...+++..+..++.||+.||.|||++||+||||||+|||+..+  ....+||+|||+|+.+
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence            6 56655531         1248899999999999999999999999999999999999532  2347999999999876


Q ss_pred             cC
Q psy5279         333 TS  334 (1310)
Q Consensus       333 ~~  334 (1310)
                      ..
T Consensus       163 ~~  164 (317)
T cd07867         163 NS  164 (317)
T ss_pred             CC
Confidence            43


No 431
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.91  E-value=2.6e-24  Score=236.07  Aligned_cols=149  Identities=23%  Similarity=0.327  Sum_probs=125.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHH-HHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDI-MNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~I-L~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      +.|++.+.||+|+||.||+|.++.+|+.||+|.++.... .....+..|+.+ ++.++|||||++++++..++.+|+|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            468899999999999999999999999999999875432 223345556665 677899999999999999999999999


Q ss_pred             cCCCCchHHHhh----hcCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~----~~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |++| +|.+.+.    ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++  .+||+|||+++.+..
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~--~~kl~dfg~~~~~~~  156 (283)
T cd06617          81 VMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG--QVKLCDFGISGYLVD  156 (283)
T ss_pred             hhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--CEEEeeccccccccc
Confidence            9984 5554443    234689999999999999999999997 999999999999998655  799999999987643


No 432
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.91  E-value=3.3e-24  Score=237.27  Aligned_cols=151  Identities=24%  Similarity=0.407  Sum_probs=131.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeC-----C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETK-----D  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~-----~  253 (1310)
                      ...+.|.+.+.||+|+||.||+|....+++.+|+|++.... .....+.+|+.+++++ +||||++++++|...     +
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   97 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG   97 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence            45688999999999999999999999999999999986432 2345677899999999 899999999998754     3


Q ss_pred             eEEEEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         254 SFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      .+|+||||++||+|.+.+..    ...+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||++
T Consensus        98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~--~~kl~dfg~~  175 (291)
T cd06639          98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEG--GVKLVDFGVS  175 (291)
T ss_pred             eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC--CEEEeecccc
Confidence            58999999999999887742    34689999999999999999999999999999999999998655  6999999999


Q ss_pred             eeec
Q psy5279         330 RRIT  333 (1310)
Q Consensus       330 r~i~  333 (1310)
                      +.+.
T Consensus       176 ~~~~  179 (291)
T cd06639         176 AQLT  179 (291)
T ss_pred             hhcc
Confidence            8754


No 433
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.91  E-value=4e-24  Score=236.32  Aligned_cols=149  Identities=25%  Similarity=0.390  Sum_probs=127.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCe-----
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDS-----  254 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~-----  254 (1310)
                      +.|++.+.||+|+||.||+|.+..+|+.||+|.+.....  .....+.+|+.+++.+. ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            468999999999999999999999999999998865322  23356778999999995 6999999999988776     


Q ss_pred             EEEEEecCCCCchHHHhhhc-----CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         255 FTIISELAGGGELLHSLTRQ-----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~-----~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      +|+||||+.+ +|.+.+...     ..+++..+..++.||+.||.|||++||+||||||+|||++.+ +..+||+|||++
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~-~~~~kl~dfg~~  158 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ-KGLLKIADLGLG  158 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC-CCeEEEeecccc
Confidence            8999999996 677776432     347999999999999999999999999999999999999862 247999999999


Q ss_pred             eeec
Q psy5279         330 RRIT  333 (1310)
Q Consensus       330 r~i~  333 (1310)
                      +.+.
T Consensus       159 ~~~~  162 (295)
T cd07837         159 RAFS  162 (295)
T ss_pred             eecC
Confidence            8653


No 434
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.91  E-value=3.7e-25  Score=247.77  Aligned_cols=151  Identities=21%  Similarity=0.304  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||+|||++|++||||||+|||++.  +..+||+|||++........ .....+.+++.|+|||++.+..+
T Consensus       142 ~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  219 (307)
T cd05098         142 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  219 (307)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccccHHheEEcC--CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCC
Confidence            3456789999999999999999999999999975  45799999999865432111 11122334568999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|+|||||++|+|++ |..||.+....+....+.... .. .....++.+.++++.+++. ++.+|+++.+++.+
T Consensus       220 ~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         220 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC-CC-CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            999999999999999998 999998877766655554332 11 2234578899999999887 56789998887643


No 435
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.91  E-value=5.5e-24  Score=230.32  Aligned_cols=149  Identities=29%  Similarity=0.469  Sum_probs=135.9

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~--~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+......  ....+.+|+.+++.++||||+++++++...+.+++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            588999999999999999999999999999998765432  456788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +++++|.+.+.....+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||++.....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~kl~d~g~~~~~~~  151 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG--VIKLGDFGCAVKLKN  151 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEcccccccccCC
Confidence            99999999988776789999999999999999999999999999999999998644  799999999987643


No 436
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.91  E-value=9.4e-24  Score=227.47  Aligned_cols=151  Identities=24%  Similarity=0.372  Sum_probs=134.6

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+....  ......+.+|+.+|+.++||||+++++.+..++.+++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            4889999999999999999999999999999987543  23455688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++|++|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++ ..+||+|||+++.....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~-~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK-MVVKIGDFGISKILSSK  155 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEEEEccCCCceecCCC
Confidence            9999999998754  2489999999999999999999999999999999999997543 46899999999877543


No 437
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.91  E-value=8.9e-24  Score=228.21  Aligned_cols=149  Identities=25%  Similarity=0.462  Sum_probs=131.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEe-CCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYET-KDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~-~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||.||++.++.+++.||+|.+.....  ...+.+.+|+.++++++|||++++++.+.. ...+|+|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            48899999999999999999999999999999875432  344568899999999999999999998874 446899999


Q ss_pred             cCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+++++|.+.+...  ..+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++.+..
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~--~~~l~df~~~~~~~~  154 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN--IIKVGDLGIARVLEN  154 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC--cEEEecccceEEecc
Confidence            99999999888653  3489999999999999999999999999999999999998654  799999999987754


No 438
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.91  E-value=6.5e-24  Score=229.56  Aligned_cols=149  Identities=23%  Similarity=0.351  Sum_probs=134.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|+..+.||+|+||.||.+.+..+++.+++|.+....  ......+.+|+.+|++++||||+++++++...+.+++||||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            5889999999999999999999999999999986543  33445678999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+||+|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+++....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~--~~kl~d~~~~~~~~~  153 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGDFGISKILGS  153 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC--CEEECcCcceEEccc
Confidence            9999999988764  4589999999999999999999999999999999999998655  799999999987644


No 439
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.91  E-value=1.6e-24  Score=237.96  Aligned_cols=150  Identities=25%  Similarity=0.434  Sum_probs=133.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      +.|++.+.||+|+||.||+|.+..+++.||+|++.....  ...+.+.+|+.+|+.++||||+++++++..++..|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            468899999999999999999999999999998764322  234567889999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+.++.|.........+++..+..++.||+.||.|||++||+||||||+||+++.++  .+||+|||+++.+..
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~--~~~l~dfg~~~~~~~  152 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAA  152 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--cEEEEeeeeeeeccC
Confidence            999998887766555699999999999999999999999999999999999998655  799999999987644


No 440
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.91  E-value=2.8e-25  Score=240.46  Aligned_cols=148  Identities=22%  Similarity=0.326  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+|+||||+|||++.  +..++|+|||++......+.. .....+++.|+|||++.+..++.
T Consensus       103 ~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  179 (255)
T cd08219         103 LQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ--NGKVKLGDFGSARLLTSPGAY-ACTYVGTPYYVPPEIWENMPYNN  179 (255)
T ss_pred             HHHHHHHHHHHHHHhhCCcccCCCCcceEEECC--CCcEEEcccCcceeecccccc-cccccCCccccCHHHHccCCcCc
Confidence            345679999999999999999999999999975  456999999998765432221 12234678899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|+|||||++|+|++|..||...+.......+......  .....++.+.++++.+|+. +|.+|+++.+++.
T Consensus       180 ~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         180 KSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK--PLPSHYSYELRSLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             hhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC--CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence            999999999999999999999987766665555433222  2234578889999998886 6677888887654


No 441
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.91  E-value=5.5e-25  Score=241.37  Aligned_cols=156  Identities=21%  Similarity=0.334  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC---
Q psy5279         948 DAYCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE--- 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~--- 1023 (1310)
                      +..++.||+.||+|||++ +++||||||+|||++.  +..+||+|||++.......  ......+++.|+|||.+.+   
T Consensus       105 ~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~--~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~  180 (283)
T cd06617         105 LGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR--NGQVKLCDFGISGYLVDSV--AKTIDAGCKPYMAPERINPELN  180 (283)
T ss_pred             HHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC--CCCEEEeeccccccccccc--ccccccCCccccChhhcCCccc
Confidence            345677999999999998 9999999999999975  4579999999987543211  1122346688999999865   


Q ss_pred             -CCCCCccchhHHHHHHHHHhcCCCCCCCCC-hhHHHhh-hccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhh
Q psy5279        1024 -EPIFPQTDVWSAGVLAYVLLSGASPFRGQS-EPETRQN-VNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANN 1099 (1310)
Q Consensus      1024 -~~ys~ksDIWSLGViLyeLLtG~~PF~g~~-~~e~~~~-I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~ 1099 (1310)
                       ..++.++|+|||||++|+|++|..||.... ..+.... +......++  ...++++.++|+.+|+. ++.+|+++.++
T Consensus       181 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~i  258 (283)
T cd06617         181 QKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLP--AEKFSPEFQDFVNKCLKKNYKERPNYPEL  258 (283)
T ss_pred             ccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCC--ccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence             456889999999999999999999997532 2222222 211111121  23468899999999885 67789999999


Q ss_pred             hCCCcccccc
Q psy5279        1100 IDHEFWHVKD 1109 (1310)
Q Consensus      1100 L~H~f~~~~~ 1109 (1310)
                      +.|+|+....
T Consensus       259 l~~~~~~~~~  268 (283)
T cd06617         259 LQHPFFELHL  268 (283)
T ss_pred             hcCchhhhcc
Confidence            9999987543


No 442
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.91  E-value=2.5e-24  Score=236.29  Aligned_cols=151  Identities=25%  Similarity=0.414  Sum_probs=134.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.+.||+|+||.||+|.++.+++.||+|.+....  ......+.+|+++|++++||||+++++++...+..|+|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            46899999999999999999999999999999886532  2345678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |+.++.+.........+++.++..++.||+.||.|||++||+||||||+||+++.++  .+||+|||+++.+...
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~--~~kl~d~g~~~~~~~~  153 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG--VLKLCDFGFARALRAR  153 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEEeeecccccCCC
Confidence            999877776666656699999999999999999999999999999999999998654  7999999999876543


No 443
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.91  E-value=1e-23  Score=228.08  Aligned_cols=150  Identities=25%  Similarity=0.449  Sum_probs=134.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||.|+||.||+|....++..+|+|++.... ......+.+|+.+|+.++||||+++++.+...+..|+|||+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            46899999999999999999999999999999987543 23456688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc---CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ---SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~---~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++|++|.+.+...   ..+++..+..++.|++.||.|||++||+||||||+||++++++  .+||+|||++..+..
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~--~~~l~df~~~~~~~~  154 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG--SVKIADFGVSASLAD  154 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEEEcccchHHHhcc
Confidence            9999999998653   4589999999999999999999999999999999999998654  799999999987654


No 444
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.91  E-value=4.9e-24  Score=234.58  Aligned_cols=152  Identities=25%  Similarity=0.432  Sum_probs=131.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEE-----eCC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYE-----TKD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~-----~~~  253 (1310)
                      ...++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+ +||||+++++++.     ..+
T Consensus        15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   93 (286)
T cd06638          15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGD   93 (286)
T ss_pred             CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCC
Confidence            46788999999999999999999999999999999876432 2335677899999999 6999999999884     446


Q ss_pred             eEEEEEecCCCCchHHHhh----hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         254 SFTIISELAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~----~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      .+|+||||++||+|.+.+.    ....+++..+..++.|++.||.|||+++|+||||||+|||++.++  .+||+|||++
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~kl~dfg~~  171 (286)
T cd06638          94 QLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEG--GVKLVDFGVS  171 (286)
T ss_pred             eEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCC--CEEEccCCce
Confidence            7999999999999988764    234588999999999999999999999999999999999998765  6999999999


Q ss_pred             eeecC
Q psy5279         330 RRITS  334 (1310)
Q Consensus       330 r~i~~  334 (1310)
                      +.+..
T Consensus       172 ~~~~~  176 (286)
T cd06638         172 AQLTS  176 (286)
T ss_pred             eeccc
Confidence            87643


No 445
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.91  E-value=7.1e-25  Score=244.78  Aligned_cols=151  Identities=29%  Similarity=0.463  Sum_probs=134.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...+.|.....||+|+||.||++.+..+++.||||.+........+.+.+|+.+++.++||||+++++.|...+..|+||
T Consensus        19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~   98 (292)
T cd06658          19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM   98 (292)
T ss_pred             chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence            44566666788999999999999999999999999987655455667889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||++|++|.+.+.. +.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++..+.
T Consensus        99 e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kL~dfg~~~~~~  169 (292)
T cd06658          99 EFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG--RIKLSDFGFCAQVS  169 (292)
T ss_pred             eCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEccCcchhhcc
Confidence            99999999887754 4689999999999999999999999999999999999998654  79999999997653


No 446
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.91  E-value=6.9e-25  Score=242.28  Aligned_cols=99  Identities=27%  Similarity=0.385  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  +..+||+|||++.........  ......++..|+|||++.+..++
T Consensus       113 ~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~  190 (284)
T cd05079         113 KYAVQICKGMDYLGSRQYVHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFY  190 (284)
T ss_pred             HHHHHHHHHHHHHHHCCeeecccchheEEEcC--CCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCC
Confidence            35679999999999999999999999999975  456999999998755322211  11223455679999999988899


Q ss_pred             CccchhHHHHHHHHHhcCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      .++|||||||++|+|++|..|+.
T Consensus       191 ~~~Di~slG~il~ellt~~~~~~  213 (284)
T cd05079         191 IASDVWSFGVTLYELLTYCDSES  213 (284)
T ss_pred             ccccchhhhhhhhhhhcCCCCCc
Confidence            99999999999999999877653


No 447
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.91  E-value=4.6e-24  Score=255.61  Aligned_cols=144  Identities=20%  Similarity=0.245  Sum_probs=128.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ...|.+.+.||+|+||.||+|.+..+++.||||....      ..+.+|+.+|++|+|||||++++++...+..+||||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4579999999999999999999999999999996431      2356899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +. ++|...+... ..+++..+..++.||+.||.|||++|||||||||+|||++.++  .+||+|||+|+.+..
T Consensus       242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~--~vkL~DFGla~~~~~  312 (461)
T PHA03211        242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE--DICLGDFGAACFARG  312 (461)
T ss_pred             cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC--CEEEcccCCceeccc
Confidence            96 5787777653 4599999999999999999999999999999999999998654  799999999987643


No 448
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.91  E-value=9.4e-25  Score=245.30  Aligned_cols=97  Identities=28%  Similarity=0.431  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.|++.||.|||++|++||||||+|||++.  ++.+||+|||++......     ....+++.|+|||.+.   ...
T Consensus       118 ~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~  190 (308)
T cd06634         118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQ  190 (308)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC--CCcEEECCcccceeecCc-----ccccCCccccCHHHHhhcccCC
Confidence            345679999999999999999999999999975  467999999988654322     1234678999999975   345


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++.++|||||||++|+|++|..||...
T Consensus       191 ~~~~~Di~slG~il~el~~g~~p~~~~  217 (308)
T cd06634         191 YDGKVDVWSLGITCIELAERKPPLFNM  217 (308)
T ss_pred             CCcccchHHHHHHHHHHHcCCCCCccc
Confidence            778999999999999999999998643


No 449
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.91  E-value=1.1e-24  Score=236.13  Aligned_cols=146  Identities=20%  Similarity=0.346  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  +..+||+|||++......... .....+++.|+|||.+.+..++.+
T Consensus       108 ~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~--~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~  184 (261)
T cd05148         108 DMACQVAEGMAYLEEQNSIHRDLAARNILVGE--DLVCKVADFGLARLIKEDVYL-SSDKKIPYKWTAPEAASHGTFSTK  184 (261)
T ss_pred             HHHHHHHHHHHHHHHCCeeccccCcceEEEcC--CceEEEccccchhhcCCcccc-ccCCCCceEecCHHHHccCCCCch
Confidence            45679999999999999999999999999985  457999999998755322111 112234567999999998889999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +|+|||||++|+|++ |..||.+.+..+....+... +..+ .....+++..+++.+++. ++.+|+++.+.+
T Consensus       185 ~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~  255 (261)
T cd05148         185 SDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-YRMP-CPAKCPQEIYKIMLECWAAEPEDRPSFKALR  255 (261)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-CcCC-CCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            999999999999998 89999988777766665532 2222 234678899999999886 567898887755


No 450
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91  E-value=9.4e-25  Score=241.29  Aligned_cols=100  Identities=29%  Similarity=0.391  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC--CC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--IF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--ys 1027 (1310)
                      .++.|++.||.|||+.|++||||||+||+++.  +..++|+|||++...............+++.|+|||.+.+..  .+
T Consensus       109 ~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  186 (288)
T cd05583         109 VYIAEIVLALDHLHQLGIIYRDIKLENILLDS--EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHD  186 (288)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCc
Confidence            34569999999999999999999999999975  456999999998765332222222234678999999987664  67


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|+||||+++|+|++|..||..
T Consensus       187 ~~~Dv~slG~il~el~tg~~p~~~  210 (288)
T cd05583         187 KAVDWWSLGVLTFELLTGASPFTV  210 (288)
T ss_pred             chhhhHHHHHHHHHHHhCCCCccc
Confidence            889999999999999999999864


No 451
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.91  E-value=3.8e-24  Score=244.36  Aligned_cols=150  Identities=27%  Similarity=0.417  Sum_probs=131.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--------  252 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--------  252 (1310)
                      +..+|.+.+.||+|+||.||+|.++.+|+.||+|.+........+.+.+|+.+|++++||||+++++++...        
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV   82 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence            568899999999999999999999999999999999766555566788999999999999999999877654        


Q ss_pred             ------CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEee
Q psy5279         253 ------DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF  326 (1310)
Q Consensus       253 ------~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDF  326 (1310)
                            ..+|+||||+.+ +|.+.+. .+.+++..++.++.||++||.|||++||+||||||+|||++.++ ..+||+||
T Consensus        83 ~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~-~~~kl~df  159 (342)
T cd07854          83 GSLTELNSVYIVQEYMET-DLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED-LVLKIGDF  159 (342)
T ss_pred             ccccccceEEEEeecccc-cHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC-ceEEECCc
Confidence                  358999999974 7877664 34699999999999999999999999999999999999997543 46899999


Q ss_pred             ccceeec
Q psy5279         327 GLSRRIT  333 (1310)
Q Consensus       327 GLAr~i~  333 (1310)
                      |+++.+.
T Consensus       160 g~~~~~~  166 (342)
T cd07854         160 GLARIVD  166 (342)
T ss_pred             ccceecC
Confidence            9998753


No 452
>KOG0695|consensus
Probab=99.91  E-value=6e-25  Score=243.42  Aligned_cols=199  Identities=21%  Similarity=0.348  Sum_probs=166.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC---CcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~---~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -.++|.++++||+|+|++|.++.+++|.+.||+|++++.   ...+.+.+..|-.+..+- +||.+|.|+.+|.++..++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            457899999999999999999999999999999999764   234456677777777665 7999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~  335 (1310)
                      +|.||++||+|+-.+.++..++|..+++|..+|+.||.|||++|||.||||.+|+|++.++  +|||+|+|+.|.-- +.
T Consensus       328 fvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg--hikltdygmcke~l~~g  405 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMCKEGLGPG  405 (593)
T ss_pred             EEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC--ceeecccchhhcCCCCC
Confidence            9999999999999998888899999999999999999999999999999999999999876  99999999998654 44


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchh--hhhhhcccCCCCCC
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGN--AAVRRYYRRRPLNS  403 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~--~~l~~~~~r~~~~~  403 (1310)
                      ....++||||.|++     |+++-+                 +.|.+..|||+.  +...++-.|-|.|=
T Consensus       406 d~tstfcgtpnyia-----peilrg-----------------eeygfsvdwwalgvlmfemmagrspfdi  453 (593)
T KOG0695|consen  406 DTTSTFCGTPNYIA-----PEILRG-----------------EEYGFSVDWWALGVLMFEMMAGRSPFDI  453 (593)
T ss_pred             cccccccCCCcccc-----hhhhcc-----------------cccCceehHHHHHHHHHHHHcCCCCcce
Confidence            45678999999986     444322                 336677888654  44455666655543


No 453
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.91  E-value=6e-24  Score=238.28  Aligned_cols=149  Identities=29%  Similarity=0.458  Sum_probs=133.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+......   ....+.+|+++|+.++||||+++++.+...+..|+||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            4689999999999999999999999999999999764322   3456788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||+.|++|.+.+...  ..+++..+..++.|++.||+|||++||+||||||+|||++.++  .+||+|||++....
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~  154 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG--HIMLSDFDLSKQSD  154 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC--CEEEeecchhhccc
Confidence            999999999988653  4699999999999999999999999999999999999998655  79999999987653


No 454
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.91  E-value=9.7e-24  Score=227.97  Aligned_cols=150  Identities=27%  Similarity=0.499  Sum_probs=137.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+|+.++..++||||+++++++...+.+|+||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            358899999999999999999999999999999876543 3456788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +++++|.+.+.....+++..+..++.|++.||.|||+ +|++||||+|+||+++.++  .+||+|||+++.+..
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~--~~~l~df~~~~~~~~  152 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG--EVKIADFGISKVLEN  152 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC--CEEEccCccceeccc
Confidence            9999999999877789999999999999999999999 9999999999999998654  799999999987754


No 455
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.91  E-value=6.7e-24  Score=227.46  Aligned_cols=150  Identities=30%  Similarity=0.524  Sum_probs=137.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+.....  .....+.+|+++++++.|||++++++++...+.+++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            47889999999999999999999999999999976543  3456788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +++++|.+.+.....+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+++.....
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~  152 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG--VVKLADFGVATKLNDV  152 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC--CEEEeccccceecCCC
Confidence            99999999988777899999999999999999999999999999999999998644  7999999999977543


No 456
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.91  E-value=1.1e-24  Score=233.53  Aligned_cols=151  Identities=20%  Similarity=0.290  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||.|||++||+||||||+||+++.  +..+||+|||++........ .......+++.|+|||.+....+
T Consensus       107 ~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (262)
T cd00192         107 LLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE--DLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIF  184 (262)
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCccCcceEEECC--CCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCc
Confidence            4556789999999999999999999999999986  46799999999876543221 11222345688999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|+|||||++|+|++ |..||.+....+..+.+....  .......++++..+++.+|+. ++.+|+++.+.+.+
T Consensus       185 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         185 TSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY--RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             chhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            999999999999999998 699999987777666655421  112234568999999999887 56789999887654


No 457
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.91  E-value=5.8e-24  Score=240.87  Aligned_cols=143  Identities=17%  Similarity=0.323  Sum_probs=126.7

Q ss_pred             eeceeccc--CceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         187 FGDELGRG--VTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       187 i~~~LG~G--sFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      +.++||+|  +||+||++.++.+|+.||+|.+....  ......+.+|+.+++.++|||||+++++|..++.+|+||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            56789999  78999999999999999999997542  233456778999999999999999999999999999999999


Q ss_pred             CCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         263 GGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       263 ~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      ++|+|.+.+...  ..+++..+..++.|++.||+|||++||+||||||+|||++.++  .+|++|||.+..
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~--~~~l~~~~~~~~  150 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGLRSNLS  150 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC--cEEEcccchhhc
Confidence            999999888643  4589999999999999999999999999999999999998665  799999986544


No 458
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.91  E-value=6.6e-25  Score=237.29  Aligned_cols=94  Identities=20%  Similarity=0.320  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||+|||++||+||||||+||+++.  +..++++|||.+.......    ....+++.|+|||.+.+..++.+
T Consensus        89 ~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~df~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~  162 (237)
T cd05576          89 RWAAEMVVALDALHREGIVCRDLNPNNILLDD--RGHIQLTYFSRWSEVEDSC----DGEAVENMYCAPEVGGISEETEA  162 (237)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEecccchhcccccc----ccCCcCccccCCcccCCCCCCch
Confidence            34569999999999999999999999999986  4569999999875543211    11234567999999988889999


Q ss_pred             cchhHHHHHHHHHhcCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF 1049 (1310)
                      +|+||+||++|+|++|..||
T Consensus       163 ~DvwslG~il~el~~g~~~~  182 (237)
T cd05576         163 CDWWSLGAILFELLTGKTLV  182 (237)
T ss_pred             hhHHHHHHHHHHHHHCcchh
Confidence            99999999999999998776


No 459
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.91  E-value=1e-23  Score=266.14  Aligned_cols=148  Identities=21%  Similarity=0.275  Sum_probs=130.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++....   ....+.+.+|+.+++.++|||||++++++.+.+..|+||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57999999999999999999999999999999997532   223456889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc-----------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         260 ELAGGGELLHSLTRQ-----------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~-----------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                      ||++||+|.+.+...           ..++...+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg--~vKLiDFGL  159 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFG--EVVILDWGA  159 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCC--CEEEEecCc
Confidence            999999998877531           1244566788999999999999999999999999999998655  799999999


Q ss_pred             ceee
Q psy5279         329 SRRI  332 (1310)
Q Consensus       329 Ar~i  332 (1310)
                      |+..
T Consensus       160 Ak~i  163 (932)
T PRK13184        160 AIFK  163 (932)
T ss_pred             ceec
Confidence            9876


No 460
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.91  E-value=6.3e-24  Score=241.42  Aligned_cols=150  Identities=24%  Similarity=0.416  Sum_probs=129.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----e
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----S  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----~  254 (1310)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.+|++++||||+++++++....     .
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence            5678999999999999999999999999999999986432 233455778999999999999999999876543     5


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +|+|+||+.+ +|...+. ...+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        83 ~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~--~~kl~dfg~~~~~~~  158 (336)
T cd07849          83 VYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC--DLKICDFGLARIADP  158 (336)
T ss_pred             EEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEECcccceeeccc
Confidence            8999999975 7776664 35699999999999999999999999999999999999998655  799999999987643


No 461
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.91  E-value=6.2e-24  Score=237.03  Aligned_cols=236  Identities=25%  Similarity=0.389  Sum_probs=173.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..++|++.+.||+|+||.||++.+..+++.||+|.+........+.+.+|+.+++.++||||+++++.|...+..|+|+|
T Consensus        17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   96 (293)
T cd06647          17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME   96 (293)
T ss_pred             chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence            35789999999999999999999999999999999875544455678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC-CC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK-LN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~-l~  339 (1310)
                      |+++|+|.+.+.+ ..+++.++..++.|++.||.|||++|++||||||+||+++.++  .+||+|||++........ ..
T Consensus        97 ~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~--~~kL~dfg~~~~~~~~~~~~~  173 (293)
T cd06647          97 YLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRS  173 (293)
T ss_pred             cCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC--CEEEccCcceecccccccccc
Confidence            9999999988764 3588999999999999999999999999999999999998654  799999999876543221 11


Q ss_pred             CcccchHHHh-------------------------hhcCCCccccCCCCCC-----CCCCCcchhhhhhhcccchhhchh
Q psy5279         340 PLEYDVRYVR-------------------------QALRHPWLNFADRKPT-----EDTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       340 ~~~~t~~yv~-------------------------~~~r~P~l~~~~~~~~-----~~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      ...+++.|++                         ..+..||-........     ...+.+  .....+...+.|++..
T Consensus       174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~  251 (293)
T cd06647         174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLNR  251 (293)
T ss_pred             cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCC--CCccccCHHHHHHHHH
Confidence            1122222221                         1233344221100000     000100  0111223445677777


Q ss_pred             hhhhhcccCCCCCCccCCCcceecCCCCCCCC
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTP  421 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp  421 (1310)
                      .+..+...|+++++++.|||....-|-.+.+|
T Consensus       252 ~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~  283 (293)
T cd06647         252 CLEMDVEKRGSAKELLQHPFLKIAKPLSSLTP  283 (293)
T ss_pred             HccCChhhCcCHHHHhcCHHHhcCcccccccc
Confidence            77778889999999999999754444444443


No 462
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.91  E-value=1.2e-24  Score=236.72  Aligned_cols=148  Identities=21%  Similarity=0.284  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++|++|+||||+||+++.  +..++|+|||++......... .....+++.|+|||.+.+..++.
T Consensus       109 ~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~  185 (267)
T cd08229         109 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNF  185 (267)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCCEEECcchhhhccccCCcc-cccccCCcCccCHHHhcCCCccc
Confidence            445779999999999999999999999999975  456999999988654322211 12234678999999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChh--HHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEP--ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~--e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      ++|+|||||++|+|++|..||.+....  .....+....+ .+......+.+.++++.+|+. ++.+|+++.+++
T Consensus       186 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~  259 (267)
T cd08229         186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY-PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVY  259 (267)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCC-CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence            999999999999999999999765432  22222222111 111234578899999999886 667798887654


No 463
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.91  E-value=1.1e-23  Score=235.68  Aligned_cols=151  Identities=28%  Similarity=0.422  Sum_probs=129.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~ly  256 (1310)
                      ..+.|++.+.||+|+||.||+|.++.+|+.||+|.+.....  .....+.+|+.+|++++||||+++++++...  +.+|
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            34679999999999999999999999999999999864322  2233456899999999999999999999765  5789


Q ss_pred             EEEecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         257 IISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +||||+.+ +|.+.+.. ...+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        85 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~kL~dfg~~~~~~~  160 (309)
T cd07845          85 LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG--CLKIADFGLARTYGL  160 (309)
T ss_pred             EEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEECccceeeecCC
Confidence            99999975 67666654 35689999999999999999999999999999999999998655  799999999987653


No 464
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.91  E-value=1.8e-24  Score=232.42  Aligned_cols=149  Identities=19%  Similarity=0.317  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++||||||+||+++.  ...++|+|||++...............+++.|+|||.+.+..++.
T Consensus       106 ~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~  183 (258)
T smart00219      106 LSFALQIARGMEYLESKNFIHRDLAARNCLVGE--NLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTS  183 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCeeecccccceEEEcc--CCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCc
Confidence            345679999999999999999999999999986  447999999998765432121111223567899999998888999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|+||+||++|+|++ |.+||.+.+.....+.+.....  .......+.+..+++.+|+. ++.+|+++.+++.
T Consensus       184 ~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      184 KSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR--LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             chhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            9999999999999998 8999998777776666544332  12233478899999999887 5678999888663


No 465
>KOG0192|consensus
Probab=99.91  E-value=2.2e-24  Score=250.85  Aligned_cols=204  Identities=18%  Similarity=0.244  Sum_probs=157.8

Q ss_pred             CceeecceeeeeeeCCEEEEEEeccCCC--cceeeecccCCcccccccc---cCCCchhHHHHHHHHHHHHHHHHHCC-c
Q psy5279         894 PFFREKPITIPVVIGDKLEMKCLAVGEP--KPVIQWFKLGTSTLCYLPI---VIPTTHKDAYCVTSVLDGLQYLHWRG-L  967 (1310)
Q Consensus       894 ~ffrE~~~~~~l~~g~~l~~~~l~~G~p--~~vi~~f~~g~~l~~~L~~---~i~~~~~~~~i~~QIl~AL~yLHs~g-I  967 (1310)
                      .|-+|+.++..+.|.+++.+......+|  ..++..|..++++..++..   .........-++.||+.||.|||+++ |
T Consensus        85 ~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~i  164 (362)
T KOG0192|consen   85 AFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPI  164 (362)
T ss_pred             HHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCe
Confidence            5677888888889999998888777766  6677778888888888854   23334445667889999999999999 9


Q ss_pred             eecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc--CCCCCCccchhHHHHHHHHHhcC
Q psy5279         968 CHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA--EEPIFPQTDVWSAGVLAYVLLSG 1045 (1310)
Q Consensus       968 VHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~--~~~ys~ksDIWSLGViLyeLLtG 1045 (1310)
                      |||||||+|||++... .++||||||+++...... ......+||+.|||||++.  ...|+.++|||||||++|||++|
T Consensus       165 IHrDLK~~NiLv~~~~-~~~KI~DFGlsr~~~~~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~  242 (362)
T KOG0192|consen  165 IHRDLKSDNILVDLKG-KTLKIADFGLSREKVISK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTG  242 (362)
T ss_pred             eecccChhhEEEcCCC-CEEEECCCccceeecccc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHC
Confidence            9999999999998632 389999999997654322 2223357889999999999  56999999999999999999999


Q ss_pred             CCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1046 ASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1046 ~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      ..||.+.........+.....+ +.+...+++....++..++. ++..|++..+++
T Consensus       243 ~~Pf~~~~~~~~~~~v~~~~~R-p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  243 EIPFEDLAPVQVASAVVVGGLR-PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             CCCCCCCCHHHHHHHHHhcCCC-CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence            9999998875554444333222 22234478888999988876 556678877654


No 466
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.91  E-value=1.2e-23  Score=234.38  Aligned_cols=149  Identities=25%  Similarity=0.441  Sum_probs=127.5

Q ss_pred             CeeeeceecccCceEEEEEEEcC--CCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERS--SGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFT  256 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~--Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~ly  256 (1310)
                      +|++.+.||+|+||.||+|.++.  +++.||+|.+....   ......+.+|+.+++.++||||+++++++...  +.++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            47889999999999999999998  89999999997632   33345677899999999999999999999988  8899


Q ss_pred             EEEecCCCCchHHHhhh-----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC--CCeEEEEeeccc
Q psy5279         257 IISELAGGGELLHSLTR-----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLS  329 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~-----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~--~~~VKLsDFGLA  329 (1310)
                      +||||+++ +|.+.+..     ...+++..+..++.||+.||.|||++||+||||||+|||++.++  ...+||+|||++
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            99999986 55554431     12589999999999999999999999999999999999998611  247999999999


Q ss_pred             eeec
Q psy5279         330 RRIT  333 (1310)
Q Consensus       330 r~i~  333 (1310)
                      +.+.
T Consensus       160 ~~~~  163 (316)
T cd07842         160 RLFN  163 (316)
T ss_pred             cccC
Confidence            8764


No 467
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.91  E-value=1.4e-24  Score=238.54  Aligned_cols=149  Identities=26%  Similarity=0.433  Sum_probs=133.3

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|...+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+++.++||||++++++|..++.+|+||||
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            45778889999999999999999999999999987543 23445688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++|++|.+.+.. +.+++..+..++.|++.||.|||++||+|+||||+||+++.++  .+||+|||+++.+..
T Consensus        84 ~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~--~~~l~dfg~~~~~~~  153 (277)
T cd06642          84 LGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVKLADFGVAGQLTD  153 (277)
T ss_pred             cCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC--CEEEccccccccccC
Confidence            999999888754 5689999999999999999999999999999999999998654  799999999987643


No 468
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.91  E-value=4.3e-24  Score=235.01  Aligned_cols=150  Identities=23%  Similarity=0.394  Sum_probs=130.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEe------CC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYET------KD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~------~~  253 (1310)
                      ....|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++++ +||||++++++|..      .+
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   92 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD   92 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence            4468899999999999999999999999999999986543 2344578899999998 79999999999853      46


Q ss_pred             eEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 SFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      .+|+||||+++|+|.+.+...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.
T Consensus        93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~--~~~l~dfg~~~~  170 (282)
T cd06636          93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQ  170 (282)
T ss_pred             EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCcchhh
Confidence            789999999999999888643  3488888999999999999999999999999999999998655  799999999986


Q ss_pred             ec
Q psy5279         332 IT  333 (1310)
Q Consensus       332 i~  333 (1310)
                      ..
T Consensus       171 ~~  172 (282)
T cd06636         171 LD  172 (282)
T ss_pred             hh
Confidence            53


No 469
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.91  E-value=2.3e-23  Score=227.47  Aligned_cols=149  Identities=28%  Similarity=0.465  Sum_probs=132.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-----cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-----NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSF  255 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-----~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~l  255 (1310)
                      ..|.+.+.||+|+||.||+|.++.+|+.||+|.+....     ......+.+|+.+|++++||||+++++.+.+.  +.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            46899999999999999999999999999999875321     12345688999999999999999999998764  568


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++||||++|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||+++.++  .+||+|||+++...
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~--~~~l~dfg~~~~~~  157 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG--NVKLGDFGASKRIQ  157 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEECccccccccc
Confidence            99999999999999988777799999999999999999999999999999999999997654  79999999998753


No 470
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.91  E-value=6.9e-25  Score=241.05  Aligned_cols=149  Identities=17%  Similarity=0.244  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.|++.||.|||++|++||||||+|||++.  +..+||+|||++......... ......+++.|+|||++.+..++
T Consensus       122 ~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  199 (277)
T cd05062         122 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT  199 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCcchheEEEcC--CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcC
Confidence            446789999999999999999999999999985  557999999998654321111 11122345789999999988899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .++|+|||||++|+|++ |..||.+.+..+....+.....  +.....++...++++.+|+. ++.+|+++.+.+.
T Consensus       200 ~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  273 (277)
T cd05062         200 TYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL--LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  273 (277)
T ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999998 7999998877766655443322  22234577889999999886 5678999888764


No 471
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.91  E-value=5.1e-24  Score=234.54  Aligned_cols=149  Identities=23%  Similarity=0.456  Sum_probs=133.9

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ..|+..+.||.|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.+.||||+++++++...+.+|+||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            45778899999999999999999999999999987543 23445688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++||+|.+.+.. +.+++..+..++.|++.||+|||+++++|+||+|+||+++.++  .++|+|||+++.+..
T Consensus        84 ~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~--~~~l~dfg~~~~~~~  153 (277)
T cd06640          84 LGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC--CEEEcccccceeccC
Confidence            999999988764 5689999999999999999999999999999999999998655  799999999987654


No 472
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.91  E-value=5.8e-24  Score=234.92  Aligned_cols=148  Identities=21%  Similarity=0.323  Sum_probs=134.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||+||++.+..+|+.||+|++.... ......+.+|+++++.++||||+++++.+...+.+|+||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            56889999999999999999999999999999886542 34456788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      +++|+|...+...+.+++..+..++.|++.||.|||+ ++|+||||||+|||++.++  .++|+|||+++..
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~l~d~gl~~~~  154 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--QIKLCDFGVSGEL  154 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC--cEEEccCCcccch
Confidence            9999999888777779999999999999999999996 6999999999999998654  7999999998765


No 473
>KOG0576|consensus
Probab=99.91  E-value=1.2e-25  Score=266.16  Aligned_cols=346  Identities=23%  Similarity=0.319  Sum_probs=242.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .-.++|++...+|.|+||.||+|+++.+++..|+|+++.....+-..+..|+-+|+..+|||||-+++.|-..+.+++.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            45688999999999999999999999999999999998765556667788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l  338 (1310)
                      |||.||+|.+...--+.++|.++.+.+++.+.||+|||++|-+|||||-.|||+++.+  .||++|||.+..++.. .+-
T Consensus        92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g--DvklaDfgvsaqitati~Kr  169 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG--DVKLADFGVSAQITATIAKR  169 (829)
T ss_pred             EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC--ceeecccCchhhhhhhhhhh
Confidence            9999999999888788899999999999999999999999999999999999998766  7999999999877542 233


Q ss_pred             CCcccchHHHhhhcC------------------CCccccCCCCCCCCCCCcchhhhh-------------------hhcc
Q psy5279         339 NPLEYDVRYVRQALR------------------HPWLNFADRKPTEDTPKLNTDALR-------------------NYYN  381 (1310)
Q Consensus       339 ~~~~~t~~yv~~~~r------------------~P~l~~~~~~~~~~~p~~~~~~~~-------------------~~~~  381 (1310)
                      +.+.|||.++++...                  -+-+.++...|    |.++--+++                   .++.
T Consensus       170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqp----plfdlhpmr~l~LmTkS~~qpp~lkDk~kws~  245 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQP----PLFDLHPMRALFLMTKSGFQPPTLKDKTKWSE  245 (829)
T ss_pred             hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCC----cccccchHHHHHHhhccCCCCCcccCCccchH
Confidence            456666654332110                  11111111111    112212222                   2233


Q ss_pred             cchhhchhhhhhhcccCCCCCCccCCCcceecCCCCCCCCCCCCcceecccccccccccccccCCCCCCCcccccC----
Q psy5279         382 LYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWEDN----  457 (1310)
Q Consensus       382 ~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~d~----  457 (1310)
                      ..-+|+-..+-+-+.+|+++...|+||+...-....... +      ++.+         -+.|+  +.+-.+.|-    
T Consensus       246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~-e------LLdK---------~n~P~--~~v~~~~d~~~E~  307 (829)
T KOG0576|consen  246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAI-E------LLDK---------VNNPN--PVVRYLEDYDGED  307 (829)
T ss_pred             HHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHH-H------HHHH---------ccCCC--CcccccccCCccc
Confidence            334454445556688999999999999964321000000 0      0000         12222  111111111    


Q ss_pred             ----CCCCCCCc--hhhHHHHhccCCCHHHHHHHHHHHHHHhhhhccCCceecCCCCCCeEeccCCCCcEEEecccccch
Q psy5279         458 ----VPNRGPGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  531 (1310)
Q Consensus       458 ----v~e~~~~~--el~~~~~~~~~~~e~~~~~~~~qi~~~~~y~H~~~i~hrDlkp~Nil~~~~~~~~ikl~DfG~a~~  531 (1310)
                          ..+.+.+|  -....-.....|-+.+.....+.=++++.|||+--=+|||    |||.+++   ..|..|||.+.+
T Consensus       308 ~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~~---~~~~~~~~v~~~  380 (829)
T KOG0576|consen  308 YLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSEE---EVKLLDFAVPPQ  380 (829)
T ss_pred             ccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccccc---ccccccccCCcc
Confidence                22222333  1111222223456666777788888999999998889999    9999753   589999999999


Q ss_pred             hccccccCCCCCCCCceeEeechhhhhHHHHhhc
Q psy5279         532 ITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEA  565 (1310)
Q Consensus       532 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~  565 (1310)
                      ++-.-         --.++..||.+..++-++++
T Consensus       381 L~~~~---------~~~t~~~~~~~~~pev~~~~  405 (829)
T KOG0576|consen  381 LTRTM---------KPRTAIGTPEPLAPEVIQEN  405 (829)
T ss_pred             cCccc---------ccccCCCCCCCCCchhhccc
Confidence            88443         22456778888888866654


No 474
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.91  E-value=1.8e-24  Score=235.13  Aligned_cols=147  Identities=20%  Similarity=0.258  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.|++.||+|||++||+||||||.|||++.  +..+||+|||++.........  ....+.+++.|+|||.+....++
T Consensus        99 ~i~~qi~~al~~lH~~~i~H~dlkp~nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  176 (257)
T cd05116          99 ELVHQVSMGMKYLEETNFVHRDLAARNVLLVT--QHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFS  176 (257)
T ss_pred             HHHHHHHHHHHHHHHCCEeecccchhhEEEcC--CCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcC
Confidence            34679999999999999999999999999985  457999999998765332211  11222345789999999888899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      .++|+|||||++|+|++ |..||.+.+..+....+.....  +.....+++++++++.+|+. ++.+|+++..+.
T Consensus       177 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~  249 (257)
T cd05116         177 SKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER--MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVE  249 (257)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHH
Confidence            99999999999999997 9999998877766666554321  22334678999999999886 567888887654


No 475
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.91  E-value=9.7e-25  Score=240.59  Aligned_cols=150  Identities=17%  Similarity=0.276  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......++..|+|||.+.+..+
T Consensus       126 ~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05090         126 FLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE--QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHHhcCeehhccccceEEEcC--CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCC
Confidence            3456779999999999999999999999999985  45699999999876532211 11122234567999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|+|||||++|+|++ |..||.+.+..+..+.+.....  ......++++.++++.+|+. ++.+|+++.++++
T Consensus       204 ~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  278 (283)
T cd05090         204 SSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQL--LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHT  278 (283)
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            999999999999999998 9999998776665555543221  12234578899999999887 5677888887654


No 476
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.91  E-value=1.7e-24  Score=241.77  Aligned_cols=150  Identities=22%  Similarity=0.320  Sum_probs=117.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ....+.+++.|+|||++.+..++
T Consensus       140 ~~~~~qi~~al~~LH~~givH~dlkp~Nili~~--~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  217 (304)
T cd05101         140 VSCTYQVARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYT  217 (304)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecccccceEEEcC--CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCC
Confidence            456789999999999999999999999999975  457999999998765432211 12223445789999999988899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      .++|||||||++|+|++ |..||.+.+..+....+.... .. .....++.++++|+.+++. .+.+|+++.++++.
T Consensus       218 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         218 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RM-DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cC-CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            99999999999999998 899999888777766654332 11 1224578899999999886 56779888876643


No 477
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.91  E-value=1.7e-24  Score=235.38  Aligned_cols=150  Identities=17%  Similarity=0.260  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||.+.+..+
T Consensus       115 ~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  192 (273)
T cd05035         115 LLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE--DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY  192 (273)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccccchheEEECC--CCeEEECCccceeeccccccccccccccCCccccCHhhcccCCC
Confidence            3456789999999999999999999999999975  457999999998765432211 1112233567999999988889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++ |.+||.+....+....+....  ........+++..+++.+++. +|.+|+++.+.+.
T Consensus       193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~  267 (273)
T cd05035         193 TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN--RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE  267 (273)
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999 999999887776665554332  112234678899999999887 5678988887654


No 478
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.91  E-value=5e-24  Score=242.64  Aligned_cols=151  Identities=25%  Similarity=0.394  Sum_probs=131.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----C
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----D  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----~  253 (1310)
                      +..+|.+.+.||+|+||.||+|.+..+|+.||||.+....  ......+.+|+.+|+.++||||+++++++...     .
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN   82 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence            4568999999999999999999999999999999986532  22334567899999999999999999988654     3


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+|+||||+. ++|.+.+...+.+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~  159 (337)
T cd07858          83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC--DLKICDFGLARTTS  159 (337)
T ss_pred             cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEECcCccccccC
Confidence            5899999996 57888887777899999999999999999999999999999999999998654  79999999998764


Q ss_pred             C
Q psy5279         334 S  334 (1310)
Q Consensus       334 ~  334 (1310)
                      .
T Consensus       160 ~  160 (337)
T cd07858         160 E  160 (337)
T ss_pred             C
Confidence            4


No 479
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.91  E-value=1.5e-24  Score=239.72  Aligned_cols=151  Identities=15%  Similarity=0.266  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  ...+||+|||++........ .......+++.|+|||.+.+..+
T Consensus       132 ~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  209 (296)
T cd05051         132 LLYMATQIASGMRYLESLNFVHRDLATRNCLVGK--NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKF  209 (296)
T ss_pred             HHHHHHHHHHHHHHHHHcCccccccchhceeecC--CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCC
Confidence            3556789999999999999999999999999986  46799999999875432211 11112234578999999998889


Q ss_pred             CCccchhHHHHHHHHHhc--CCCCCCCCChhHHHhhhccc----ccc-ccccchhccHHHHHHHHHhcc-CCcchhcHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS--GASPFRGQSEPETRQNVNFV----RYR-FEYLFKELTQEATRFLMLIFK-HEVDWITLAN 1098 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt--G~~PF~g~~~~e~~~~I~~~----~~~-f~~~~~~lS~eakdLL~~il~-~~~~rit~~e 1098 (1310)
                      +.++|||||||++|+|++  |..||...+..+...++...    ... ........+.+..+++.+++. ++.+|+++.+
T Consensus       210 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~e  289 (296)
T cd05051         210 TTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFRE  289 (296)
T ss_pred             CccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHH
Confidence            999999999999999997  78999887766655544321    000 011123467899999999886 6678999887


Q ss_pred             hh
Q psy5279        1099 NI 1100 (1310)
Q Consensus      1099 ~L 1100 (1310)
                      ++
T Consensus       290 l~  291 (296)
T cd05051         290 IH  291 (296)
T ss_pred             HH
Confidence            65


No 480
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.91  E-value=9.2e-25  Score=240.44  Aligned_cols=152  Identities=21%  Similarity=0.310  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCccc-ccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLI-HPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~-~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||+|||++|++||||||+|||++..+ ...+||+|||+++......... ......++.|+|||++.+..+
T Consensus       119 ~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  198 (277)
T cd05036         119 LFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIF  198 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCc
Confidence            44678999999999999999999999999998643 3468999999987653211111 111122357999999998899


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+.... + ......++.+..+++.+++. ++.+|+++.+.++|
T Consensus       199 ~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         199 TSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG-R-LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-c-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999997 999999887766655443221 1 11234567889999999886 56789999988765


No 481
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.91  E-value=1e-24  Score=237.68  Aligned_cols=148  Identities=20%  Similarity=0.268  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+|+||||+|||++.  +..+||+|||+++..............++..|+|||.+.+..++.+
T Consensus       104 ~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~  181 (256)
T cd05113         104 EMCKDVCEGMAYLESKQFIHRDLAARNCLVDD--QGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSK  181 (256)
T ss_pred             HHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccch
Confidence            35679999999999999999999999999975  4579999999987553322111111223457999999998889999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +|+|||||++|+|++ |..||...+..+....+......  ......+...++++.+++. ++.+|+++.+++.
T Consensus       182 ~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~  253 (256)
T cd05113         182 SDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLS  253 (256)
T ss_pred             hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            999999999999998 99999887776665555433221  1223457889999999886 5678999988764


No 482
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.91  E-value=1.5e-24  Score=235.55  Aligned_cols=150  Identities=21%  Similarity=0.368  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||+.||+|+||+|+||+++.  ...+||+|||++.....     .....+++.|+|||.+.+..++.+
T Consensus       101 ~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~  173 (260)
T cd05611         101 QYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRNGLE-----NKKFVGTPDYLAPETILGVGDDKM  173 (260)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEeecccceeccc-----cccCCCCcCccChhhhcCCCCcch
Confidence            34679999999999999999999999999986  45699999998865432     122346688999999998888999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccc-cchhccHHHHHHHHHhcc-CCcchh---cHHhhhCCCc
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFK-HEVDWI---TLANNIDHEF 1104 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~-~~~~lS~eakdLL~~il~-~~~~ri---t~~e~L~H~f 1104 (1310)
                      +|+|||||++|+|++|..||.+.+.......+......++. ....+++++.+++.+|+. ++.+|+   ++.+++.|+|
T Consensus       174 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~  253 (260)
T cd05611         174 SDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPF  253 (260)
T ss_pred             hhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChH
Confidence            99999999999999999999988777766665544433332 233578999999999996 566788   5579999998


Q ss_pred             cc
Q psy5279        1105 WH 1106 (1310)
Q Consensus      1105 ~~ 1106 (1310)
                      |.
T Consensus       254 ~~  255 (260)
T cd05611         254 FK  255 (260)
T ss_pred             hh
Confidence            75


No 483
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.91  E-value=2.1e-24  Score=232.41  Aligned_cols=150  Identities=24%  Similarity=0.372  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC-CCCc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-IFPQ 1029 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-ys~k 1029 (1310)
                      ++.||+.||.|||+.||+|+||||+||+++.  +..+||+|||++.......  ......+++.|+|||.+.... ++.+
T Consensus       107 ~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~--~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~  182 (258)
T cd06632         107 YTRQILLGLEYLHDRNTVHRDIKGANILVDT--NGVVKLADFGMAKQVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLA  182 (258)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccCccceeccccc--cccccCCCcceeCHHHhcCCCCCCch
Confidence            4569999999999999999999999999975  4579999999887653322  112234678899999988776 8899


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcc
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW 1105 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~ 1105 (1310)
                      +|+|||||++|+|++|..||...........+... ...+.....+++++++|+.+++. ++.+|+++.+.+.|+|+
T Consensus       183 ~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         183 ADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS-KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc-ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            99999999999999999999876544433333221 12233345678899999999886 67789999999999985


No 484
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.91  E-value=2.7e-23  Score=221.77  Aligned_cols=151  Identities=31%  Similarity=0.517  Sum_probs=136.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~lyLVm  259 (1310)
                      +|.+.+.||+|+||.||+|.+..+++.|++|++.....  ...+.+.+|+.++++++||||+++++.+...  +.+++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            47788999999999999999999999999999875542  3456788999999999999999999999998  8999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||+++++|.+.+.....+++.++..++.|++.||.|||+.|++|+||+|+||+++.++  .+||+|||++.......
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~  155 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--VVKLADFGCAKRLGDIE  155 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEcccccEEeccccc
Confidence            9999999999988777899999999999999999999999999999999999998644  79999999998876543


No 485
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.91  E-value=5.7e-24  Score=228.95  Aligned_cols=150  Identities=25%  Similarity=0.402  Sum_probs=131.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEe--CCeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYET--KDSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~~lyLVm  259 (1310)
                      +|++.+.||.|+||.||+|.+..+|+.||+|++....  ....+.+.+|+.+|+.++||||+++++.+..  ...+|++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            4888999999999999999999999999999986543  2344567889999999999999999998764  45689999


Q ss_pred             ecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhh-----hCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         260 ELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMH-----RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLH-----s~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ||+++++|.+.+..    ...+++..+..++.||+.||.|||     +.+|+|+||||+|||++.++  .+||+|||+++
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~--~~kl~d~g~~~  158 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN--NVKLGDFGLAK  158 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCC--CEEEecccccc
Confidence            99999999888864    356899999999999999999999     99999999999999998654  89999999999


Q ss_pred             eecCC
Q psy5279         331 RITSF  335 (1310)
Q Consensus       331 ~i~~~  335 (1310)
                      .....
T Consensus       159 ~~~~~  163 (265)
T cd08217         159 ILGHD  163 (265)
T ss_pred             cccCC
Confidence            76543


No 486
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.91  E-value=1.2e-24  Score=242.79  Aligned_cols=154  Identities=21%  Similarity=0.351  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++|++||||||+||+++.  +..+||+|||++........ ......+++.|+|||.+.+..++.+
T Consensus       119 ~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~--~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~  195 (293)
T cd06647         119 AVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPK  195 (293)
T ss_pred             HHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC--CCCEEEccCcceeccccccc-ccccccCChhhcCchhhccCCCCch
Confidence            35679999999999999999999999999975  45699999998765433222 1122346788999999988888999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccc-cccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV-RYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~-~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      +|+|||||++|+|++|..||...+.......+... ...++ ....++...++++..++. ++.+|++..+++.|+|+..
T Consensus       196 ~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~  274 (293)
T cd06647         196 VDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ-NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKI  274 (293)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCC-CccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence            99999999999999999999876554332222111 11111 233567889999999886 6778999999999999864


No 487
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.91  E-value=6.2e-24  Score=230.43  Aligned_cols=149  Identities=27%  Similarity=0.446  Sum_probs=134.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||.||+|.++.+++.+|+|.+..... .....+.+|+++++.++||||+++++.+...+.+++|+||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            357888999999999999999999999999999876532 3445688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.+++|.+.+... ..+++..+..++.|++.||.|||+ .||+||||||+||+++.++  .+||+|||++..+.
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~--~~~l~d~g~~~~~~  152 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG--QIKLCDFGVSGQLV  152 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC--CEEEeecccchhhH
Confidence            9999999988765 679999999999999999999999 9999999999999998754  79999999997654


No 488
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.91  E-value=1.7e-24  Score=235.33  Aligned_cols=150  Identities=23%  Similarity=0.457  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++|++|+||||+||+++.  +..+||+|||++.......  ......+++.|+|||.+.+..++.+
T Consensus        97 ~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~--~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~  172 (262)
T cd05572          97 FYIACVVLAFEYLHNRGIIYRDLKPENLLLDS--NGYVKLVDFGFAKKLKSGQ--KTWTFCGTPEYVAPEIILNKGYDFS  172 (262)
T ss_pred             HHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC--CCCEEEeeCCcccccCccc--ccccccCCcCccChhHhcCCCCCCh
Confidence            34569999999999999999999999999976  4569999999987654321  1222346789999999988889999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC--hhHHHhhhcc--ccccccccchhccHHHHHHHHHhcc-CCcchhc-----HHhh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS--EPETRQNVNF--VRYRFEYLFKELTQEATRFLMLIFK-HEVDWIT-----LANN 1099 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~--~~e~~~~I~~--~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit-----~~e~ 1099 (1310)
                      +|+||+||++|+|++|..||....  ..+....+..  ....++   ...+++.++++.+|+. ++.+|++     +.+.
T Consensus       173 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l  249 (262)
T cd05572         173 VDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP---NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDI  249 (262)
T ss_pred             hhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC---cccCHHHHHHHHHHccCChhhCcCCcccCHHHH
Confidence            999999999999999999998876  4444444442  222222   2348899999999886 5677988     8999


Q ss_pred             hCCCccc
Q psy5279        1100 IDHEFWH 1106 (1310)
Q Consensus      1100 L~H~f~~ 1106 (1310)
                      ++|+|+.
T Consensus       250 ~~~~~~~  256 (262)
T cd05572         250 KKHKWFN  256 (262)
T ss_pred             hcChhhh
Confidence            9999976


No 489
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.90  E-value=8.6e-24  Score=226.23  Aligned_cols=150  Identities=29%  Similarity=0.518  Sum_probs=135.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|.+.+.||+|+||.||++.+..+++.||+|++.....  .....+.+|+++++.++|||++++.+.+...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            48889999999999999999999999999999975433  4456688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc----CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~----~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++|++|.+.+...    ..+++..+..++.|++.||.|||++|++|+||+|+|||++.++  .+||+|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~--~~~l~d~~~~~~~~~~  156 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--LVKLGDFGISKVLSST  156 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC--cEEECCccceeecccC
Confidence            9999999988753    5699999999999999999999999999999999999998654  7999999999876543


No 490
>KOG1989|consensus
Probab=99.90  E-value=5.3e-24  Score=260.79  Aligned_cols=204  Identities=24%  Similarity=0.326  Sum_probs=154.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CCCcceEEEE-EEe------CCe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRLHDS-YET------KDS  254 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HPNIVkL~d~-f~~------~~~  254 (1310)
                      -++++.+.|-+|+|+.||.|.+...|..||+|++-.......+.+.+||++|++|. |||||.++|. ...      .-.
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            45678999999999999999999999999999987666677788999999999997 9999999993 321      135


Q ss_pred             EEEEEecCCCCchHHHhhh--cCCCCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         255 FTIISELAGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~--~~~lsE~~i~~ii~QIl~GL~YLHs~g--IVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ++|.||||.||.|.+++..  ...|+|.++..|++|+|+||.+||.+.  |||||||-|||||..++  +.||||||-|.
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g--~~KLCDFGSat  194 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG--NYKLCDFGSAT  194 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC--CEEeCcccccc
Confidence            7899999999999998863  345999999999999999999999987  99999999999998776  89999999886


Q ss_pred             eecCCC-CCCCcc---c-chHHHhhhcCCCccc-cCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         331 RITSFG-KLNPLE---Y-DVRYVRQALRHPWLN-FADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       331 ~i~~~~-~l~~~~---~-t~~yv~~~~r~P~l~-~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                      -....- ......   . -..|.|+.||+|++- +-...+               -+.=.| | .|+.+-+...-..|.+
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~p---------------I~eKsDIWALGclLYkLCy~t~PFe  259 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLP---------------IGEKSDIWALGCLLYKLCYFTTPFE  259 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCC---------------CcchhHHHHHHHHHHHHHHhCCCcC
Confidence            432111 000000   0 013567789999963 111111               011145 7 7787777655555544


Q ss_pred             C
Q psy5279         403 S  403 (1310)
Q Consensus       403 ~  403 (1310)
                      +
T Consensus       260 ~  260 (738)
T KOG1989|consen  260 E  260 (738)
T ss_pred             c
Confidence            4


No 491
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.90  E-value=1.2e-24  Score=240.66  Aligned_cols=153  Identities=22%  Similarity=0.338  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.|++.||.|||++||+||||||+|||++.  +..+||+|||++.......   .....|++.|+|||++.+. .++
T Consensus       100 ~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~--~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~  174 (278)
T cd05606         100 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYD  174 (278)
T ss_pred             HHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC--CCCEEEccCcCccccCccC---CcCcCCCcCCcCcHHhcCCCCCC
Confidence            345679999999999999999999999999975  4569999999986543211   1223577899999999754 688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC---hhHHHhhhccccccccccchhccHHHHHHHHHhccC-Ccchh-----cHHh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS---EPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKH-EVDWI-----TLAN 1098 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~---~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~-~~~ri-----t~~e 1098 (1310)
                      .++|+||+||++|+|++|..||.+..   .......+......   .....++++++++.+|+.. +..|+     ++.+
T Consensus       175 ~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~  251 (278)
T cd05606         175 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE  251 (278)
T ss_pred             cccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC---CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHH
Confidence            99999999999999999999998763   22222222222222   2234689999999998864 67788     8999


Q ss_pred             hhCCCcccccc
Q psy5279        1099 NIDHEFWHVKD 1109 (1310)
Q Consensus      1099 ~L~H~f~~~~~ 1109 (1310)
                      .+.|+||...+
T Consensus       252 ll~~~~~~~~~  262 (278)
T cd05606         252 VKEHPFFRSLD  262 (278)
T ss_pred             HHhCccccCCC
Confidence            99999987543


No 492
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.90  E-value=2e-24  Score=239.49  Aligned_cols=149  Identities=16%  Similarity=0.251  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||+|||++|++||||||+|||++.  +..+||+|||+++........ ......+++.|+|||.+.+..+
T Consensus       122 ~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  199 (288)
T cd05093         122 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE--NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF  199 (288)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCC
Confidence            4556789999999999999999999999999975  457999999998754322111 1112234578999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +.++|+|||||++|+|++ |.+||.+.+..+....+.....  .......+++..+++.+|+. +|.+|+++.++.
T Consensus       200 ~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~  273 (288)
T cd05093         200 TTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV--LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIH  273 (288)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            999999999999999998 9999988877666665544332  12224567899999999997 567898887753


No 493
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.90  E-value=3.8e-24  Score=239.42  Aligned_cols=147  Identities=25%  Similarity=0.387  Sum_probs=133.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||+|.++.+++.||+|.+.....   .....+.+|+.+++.++||||+++++.+..++.+|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            368899999999999999999999999999999875432   23446778999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      ||++||+|.+.+...+.+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++.
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~--~~~l~dfg~~~~  150 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG--HIKLTDFGLSKI  150 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC--CEEEeeCCCccc
Confidence            9999999999998777899999999999999999999999999999999999998654  799999999985


No 494
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.90  E-value=5.6e-24  Score=235.68  Aligned_cols=149  Identities=26%  Similarity=0.401  Sum_probs=130.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFTII  258 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~lyLV  258 (1310)
                      +.|++.+.||+|+||.||+|.++.+++.+|+|.++....  .....+.+|+.+|++++||||+++++++...  +.+|+|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            468899999999999999999999999999999875432  2233567899999999999999999999887  899999


Q ss_pred             EecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||+.+ +|.+.+.... .+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--ILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC--cEEEeecCceeeccC
Confidence            999985 8877776543 489999999999999999999999999999999999998654  799999999987654


No 495
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.90  E-value=1.8e-23  Score=226.13  Aligned_cols=149  Identities=21%  Similarity=0.432  Sum_probs=133.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||++.+..+|+.||+|.+....  ......+.+|+.++++++||||+++++++...+..|+||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            5889999999999999999999999999999986532  23345688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +.+++|.+.+....  .+++..+..++.|++.||.|||++|++|+||+|+|||++.++  .+||+|||++.....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~--~~~l~d~~~~~~~~~  153 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TIKLGDFGIARVLNS  153 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEEeeccceeecCc
Confidence            99999999886532  478999999999999999999999999999999999997654  799999999987644


No 496
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.90  E-value=7e-24  Score=233.43  Aligned_cols=141  Identities=27%  Similarity=0.465  Sum_probs=126.3

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ||+|+||+||+|.+..+|+.||+|++.....   .....+.+|+.+|+.++||||++++++|...+.+|+||||++|++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6999999999999999999999999865322   2234567899999999999999999999999999999999999999


Q ss_pred             HHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         268 LHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       268 ~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+.+....  .+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~--~~~l~dfg~~~~~~  146 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG--NVRISDLGLAVELK  146 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEccCcchhhhc
Confidence            99887655  699999999999999999999999999999999999998655  79999999997654


No 497
>KOG0596|consensus
Probab=99.90  E-value=1.1e-23  Score=246.22  Aligned_cols=91  Identities=19%  Similarity=0.289  Sum_probs=68.9

Q ss_pred             CCccccccccc--CCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-ccc
Q psy5279         931 GTSTLCYLPIV--IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHP 1007 (1310)
Q Consensus       931 g~~l~~~L~~~--i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~ 1007 (1310)
                      ..+|..+|...  ........++-+|+|.|+.++|.+||||.||||.|+|+-.   +.+||+|||+|..+....+. ...
T Consensus       443 d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk---G~LKLIDFGIA~aI~~DTTsI~kd  519 (677)
T KOG0596|consen  443 DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK---GRLKLIDFGIANAIQPDTTSIVKD  519 (677)
T ss_pred             cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe---eeEEeeeechhcccCccccceeec
Confidence            34444555332  2333367888899999999999999999999999999874   56999999999887654332 233


Q ss_pred             CCCCCCcccccccccCC
Q psy5279        1008 INTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus      1008 ~~tGtp~Y~APEvl~~~ 1024 (1310)
                      ..+||+.||+||.+...
T Consensus       520 sQvGT~NYMsPEAl~~~  536 (677)
T KOG0596|consen  520 SQVGTVNYMSPEALTDM  536 (677)
T ss_pred             cccCcccccCHHHHhhc
Confidence            45688999999998644


No 498
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.90  E-value=8.2e-24  Score=245.76  Aligned_cols=151  Identities=25%  Similarity=0.394  Sum_probs=130.5

Q ss_pred             CCCeeeeceecccCceEEEEEEE-----cCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVE-----RSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~-----k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~  254 (1310)
                      .++|++.+.||+|+||.||+|..     ..++..||+|+++... ....+.+.+|+.+|+.+ +|||||+++++|...+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            35799999999999999999974     4567799999986432 23455688999999999 89999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcC-----------------------------------------------------------
Q psy5279         255 FTIISELAGGGELLHSLTRQS-----------------------------------------------------------  275 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~-----------------------------------------------------------  275 (1310)
                      .|+|||||+||+|.+.+....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            999999999999998885421                                                           


Q ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         276 ----------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       276 ----------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                                      .+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a~~~~~  266 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR--ITKICDFGLARDIRN  266 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC--cEEEecCccceeccC
Confidence                            367778889999999999999999999999999999998644  799999999987654


No 499
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.90  E-value=2.1e-24  Score=235.44  Aligned_cols=149  Identities=17%  Similarity=0.261  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||.+.+..++
T Consensus       115 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  192 (272)
T cd05075         115 VKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE--NMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYT  192 (272)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccccchhheEEcC--CCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcC
Confidence            456789999999999999999999999999975  456999999998765332211 11223345789999999999999


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .++|+|||||++|+|++ |..||.+....+....+..... + .....++...++++.+++. ++.+|+++.+++.
T Consensus       193 ~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~  266 (272)
T cd05075         193 TKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR-L-KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC  266 (272)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC-C-CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99999999999999999 8999998777666555544321 1 1223567889999999886 5668988887654


No 500
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.90  E-value=1.9e-23  Score=228.77  Aligned_cols=147  Identities=29%  Similarity=0.411  Sum_probs=126.7

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcC-CCCcceEEEEEEeC--CeEEEEEe
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLC-HRNLVRLHDSYETK--DSFTIISE  260 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~--~~lyLVmE  260 (1310)
                      |++.+.||+|+||.||+|.++.+++.||+|++..... .......+|+.+|.++. ||||+++++++.+.  +.+++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            6788999999999999999999999999999865422 22223457999999985 99999999999988  89999999


Q ss_pred             cCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |+.+ +|.+.+... ..+++.++..++.|++.||.|||++||+||||||+||+++.   ..+||+|||+++.+...
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~~~  152 (282)
T cd07831          81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCRGIYSK  152 (282)
T ss_pred             cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC---CCeEEEecccccccccC
Confidence            9985 777777653 46899999999999999999999999999999999999986   47999999999876543


Done!