RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5279
(1310 letters)
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 197 bits (502), Expect = 2e-55
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 1/177 (0%)
Query: 157 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 216
+ ++ + V+ + + D YD +ELG G G+V+ VE+++GR + AK +
Sbjct: 25 DYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI 84
Query: 217 TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY 276
K KNE+ IMNQL H L+ LHD++E K +I E GGEL + + Y
Sbjct: 85 NTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY 144
Query: 277 -YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+E ++ +Y+RQ GL +MH SI HL + P +++ + + DFGL+ ++
Sbjct: 145 KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201
Score = 119 bits (301), Expect = 5e-29
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 17/139 (12%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
+ +GL+++H + HL+I+P+N++ + ++ VK+ID G ++
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 211
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
T EFAAPE++ EP+ TD+W+ GVL YVLLSG SPF G+ + ET QNV
Sbjct: 212 AT---------AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262
Query: 1062 NFVRYRFEY-LFKELTQEA 1079
+ F+ F ++ EA
Sbjct: 263 KRCDWEFDEDAFSSVSPEA 281
Score = 98.6 bits (246), Expect = 6e-22
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APE++ EP+ TD+W+ GVL YVLLSG SPF G+ + ET QNV + F+ F +
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277
Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEY 1260
+ EA F+ +L + P KR TV + E+ WL + R + ++ ++Y
Sbjct: 278 SPEAKDFIKNLLQ--KEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKY 335
Query: 1261 HDLKNKQFTSD---SLSSLHKTLTRSNSIQEELIS 1292
D Q + SSL K + I +
Sbjct: 336 ADWPAPQPAIGRIANFSSLRKHRPQEYQIYDSYFD 370
Score = 85.5 bits (212), Expect = 1e-17
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + + Y +E ++ +Y+RQ GL +MH SI HL + P +++ +
Sbjct: 132 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVK 191
Query: 523 LTDFGLSRRI 532
+ DFGL+ ++
Sbjct: 192 IIDFGLATKL 201
Score = 75.5 bits (186), Expect = 2e-14
Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 556 MKHLQAITEAGHTPTLAQDPPPLN----------YSVEDSPIEWSTEPPTDKYQFISEIH 605
M+ G D P +N P+E D Y + E+
Sbjct: 1 MRGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELG 60
Query: 606 RGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQ-VNTEFDNLRSLRHERIASLLEAYKP 664
G F VV + EKA T + AK + V E + L H ++ +L +A++
Sbjct: 61 SGAFGVVHRCVEKA-TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE- 118
Query: 665 STTASNIAVLVMEKLQGADVLSYLSSR-HEYTEQNVATIISQ 705
+ VL++E L G ++ +++ ++ +E V + Q
Sbjct: 119 --DKYEM-VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Score = 66.3 bits (162), Expect = 2e-11
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 32 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ ++ + V+ + + D YD +ELG G G+V+ VE+++GR + AK +
Sbjct: 25 DYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI 84
Query: 92 TGK 94
Sbjct: 85 NTP 87
Score = 32.0 bits (73), Expect = 1.5
Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 19/69 (27%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRN 378
++LL + +R+T V AL HPWL T ++ +
Sbjct: 286 KNLLQKE--PRKRLT--------------VHDALEHPWLKGDHSNLTS---RIPSSRYNK 326
Query: 379 YYNLYKDWY 387
K+ Y
Sbjct: 327 IRQKIKEKY 335
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 187 bits (476), Expect = 4e-52
Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 172 RQVKTRTKPITDAYDFG--DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
R V + + Y + LG G G V+ E ++G AAK++ +G + K KN
Sbjct: 76 RIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN 135
Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQ 288
E+ +MNQL H NL++L+D++E+K+ ++ E GGEL + +SY TE D +++Q
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ 195
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ G+ +MH++ I HL L P ++L + + + + DFGL+RR
Sbjct: 196 ICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239
Score = 117 bits (296), Expect = 2e-28
Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 17/139 (12%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
+ + +G++++H + HL+++P+N++ + + Q+K+ID G +R
Sbjct: 190 ILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
GT PEF APEV+ + + TD+WS GV+AY+LLSG SPF G ++ ET N+
Sbjct: 250 GT---------PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI 300
Query: 1062 NFVRYRFEY-LFKELTQEA 1079
R+ E F+++++EA
Sbjct: 301 LACRWDLEDEEFQDISEEA 319
Score = 96.3 bits (240), Expect = 3e-21
Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEV+ + + TD+WS GV+AY+LLSG SPF G ++ ET N+ R+ E F+++
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDI 315
Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
++EA F+ +LI + R + E ++ WL S++ + R A NR + D
Sbjct: 316 SEEAKEFISKLLIKE--KSWRISASEALKHPWL--SDHKLHSRLSAQKKKNRGSDAQD 369
Score = 84.0 bits (208), Expect = 3e-17
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + +SY TE D +++Q+ G+ +MH++ I HL L P ++L + + +
Sbjct: 170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIK 229
Query: 523 LTDFGLSRRI 532
+ DFGL+RR
Sbjct: 230 IIDFGLARRY 239
Score = 64.3 bits (157), Expect = 8e-11
Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 9/142 (6%)
Query: 568 TPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFIS--EIHRGKFSVVVKAAEKANTENLV 625
T LA D P + + Y + G+F V K E A T +
Sbjct: 59 TSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETA-TGLKL 117
Query: 626 AAKLFEYSH-DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADV 684
AAK+ + +V E + L H + L +A++ + ++I VLVME + G ++
Sbjct: 118 AAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE---SKNDI-VLVMEYVDGGEL 173
Query: 685 LSYLSSR-HEYTEQNVATIISQ 705
+ + TE + + Q
Sbjct: 174 FDRIIDESYNLTELDTILFMKQ 195
Score = 57.8 bits (140), Expect = 1e-08
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 47 RQVKTRTKPITDAYDFG--DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGT 96
R V + + Y + LG G G V+ E ++G AAK++ +G
Sbjct: 76 RIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM 127
Score = 30.1 bits (68), Expect = 5.9
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 8/48 (16%)
Query: 341 LEYDV--RY-VRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD 385
L + R +AL+HPWL+ +L+ +N + +D
Sbjct: 327 LIKEKSWRISASEALKHPWLSDHKLH-----SRLSAQKKKNRGSDAQD 369
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 183 bits (468), Expect = 1e-51
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC 238
K + + Y ++LGRG GIV+ VE SS + Y AK + KG + L K E+ I+N
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIAR 59
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHS-LTRQSYYTEYDIAHYIRQLLSGLDYMH 297
HRN++ LH+S+E+ + +I E G ++ T E +I Y+ Q+ L ++H
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+I H + P +++ + + +FG +R++
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154
Score = 118 bits (299), Expect = 3e-29
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
V V + LQ+LH + H +I P+N++ + RS +K+I+ G +++
Sbjct: 105 VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
PE+ APEV + + TD+WS G L YVLLSG +PF ++ + +N+
Sbjct: 165 TA---------PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215
Query: 1062 NFVRYRFEY-LFKELTQEA 1079
Y F+ FKE++ EA
Sbjct: 216 MNAEYTFDEEAFKEISIEA 234
Score = 93.1 bits (232), Expect = 2e-20
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEV + + TD+WS G L YVLLSG +PF ++ + +N+ Y F+ FKE+
Sbjct: 171 APEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI 230
Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLV----PSEYMIKKRERAVFLGNRLK 1254
+ EA F+ +L+ + R T E ++ WL + + + + L
Sbjct: 231 SIEAMDFVDRLLV--KERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLI 286
Score = 83.4 bits (207), Expect = 3e-17
Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 464 GGELLHS-LTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
G ++ T E +I Y+ Q+ L ++H +I H + P +++ +
Sbjct: 85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIK 144
Query: 523 LTDFGLSRRI 532
+ +FG +R++
Sbjct: 145 IIEFGQARQL 154
Score = 68.0 bits (167), Expect = 3e-12
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHER 654
+KY ++ RG+F +V + E + ++ AK + V E L RH
Sbjct: 4 YEKYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVKGTDQVLVKKEISILNIARHRN 62
Query: 655 IASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR-HEYTEQNVATIISQ 705
I L E+++ + + V++ E + G D+ +++ E E+ + + + Q
Sbjct: 63 ILHLHESFE---SMEEL-VMIFEFISGLDIFERINTSAFELNEREIVSYVHQ 110
Score = 59.6 bits (145), Expect = 2e-09
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG 95
K + + Y ++LGRG GIV+ VE SS + Y AK + KG
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG 42
Score = 33.7 bits (78), Expect = 0.33
Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 18/72 (25%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRN 378
LL+ + R+T +AL+HPWL + T + T R
Sbjct: 239 DRLLVKE--RKSRMT--------------ASEALQHPWLKQKIERV--STKVIRTLKHRR 280
Query: 379 YYNLYKDWYGNA 390
YY+ N
Sbjct: 281 YYHTLIKKDLNM 292
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 189 bits (481), Expect = 5e-51
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 96 TISHSVTVHVEDNENEYSYRTYA---RGR----------QVKTRTKPITDAYDFGDELGR 142
+ T+ +Y +R A G+ + + YD DE G+
Sbjct: 62 SRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYD-VDEQGK 120
Query: 143 GVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHA 202
V G + S + Y + V+ + + D YD +ELG G G+V+
Sbjct: 121 IVRGKGTVSSNYDNYVFDIWKQYYP----QPVEIKHDHVLDHYDIHEELGTGAFGVVHRV 176
Query: 203 VERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA 262
ER++G N+AAK + K + E+ M+ L H LV LHD++E + +I E
Sbjct: 177 TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236
Query: 263 GGGELLHSLT-RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 321
GGEL + + +E + Y+RQ+ GL +MH + HL L P +++ L
Sbjct: 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 296
Query: 322 LLTDFGLSRRI 332
L DFGL+ +
Sbjct: 297 KLIDFGLTAHL 307
Score = 121 bits (306), Expect = 1e-28
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+ V GL ++H HL+++P+N++ + RS ++KLID G T + ++
Sbjct: 258 VEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT 317
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
T EFAAPEV +P+ TD+WS GVL+Y+LLSG SPF G+++ ET +NV +
Sbjct: 318 GTA--EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 375
Query: 1069 EY-LFKELTQEATRFL--MLI 1086
+ F ++++ F+ +L+
Sbjct: 376 DDSAFSGISEDGKDFIRKLLL 396
Score = 99.5 bits (248), Expect = 2e-21
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEV +P+ TD+WS GVL+Y+LLSG SPF G+++ ET +NV + + F +
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 383
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHD 1262
+++ F+ + P R T+ + E+ WL P + + +R + D
Sbjct: 384 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPS---SRYTKIRDSIKT 440
Query: 1263 LKNKQFTS-------DSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDSS 1308
+ + SSL K + SI++ + +
Sbjct: 441 KYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTE 493
Score = 84.5 bits (209), Expect = 1e-16
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLT-RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + + +E + Y+RQ+ GL +MH + HL L P +++ L
Sbjct: 238 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK 297
Query: 523 LTDFGLSRRI 532
L DFGL+ +
Sbjct: 298 LIDFGLTAHL 307
Score = 71.8 bits (176), Expect = 8e-13
Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Query: 564 EAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTEN 623
+ + + P+E + D Y E+ G F VV + E+A T N
Sbjct: 125 KGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERA-TGN 183
Query: 624 LVAAKLFEYSHDTLHQ-VNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGA 682
AAK H++ + V E + LRH + +L +A++ + + V++ E + G
Sbjct: 184 NFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE---DDNEM-VMIYEFMSGG 239
Query: 683 DVLSYL-SSRHEYTEQNVATIISQ 705
++ + ++ +E + Q
Sbjct: 240 ELFEKVADEHNKMSEDEAVEYMRQ 263
Score = 64.9 bits (158), Expect = 1e-10
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 21 STISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVER 80
+ TV + + + V+ + + D YD +ELG G G+V+ ER
Sbjct: 120 KIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTER 179
Query: 81 SSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
++G N+AAK + E E
Sbjct: 180 ATGNNFAAKF------VMTPHESDKETVRKE 204
Score = 51.8 bits (124), Expect = 1e-06
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLA 1149
W A + + + ++ L+ Y FR+ A+N G S+ P+A +
Sbjct: 53 GGSWSPCAKS-RYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRR 111
Query: 1150 EEPIFPQ 1156
+ Q
Sbjct: 112 GYDVDEQ 118
Score = 36.0 bits (83), Expect = 0.084
Identities = 20/127 (15%), Positives = 35/127 (27%), Gaps = 22/127 (17%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRN 378
R LLL D + R+T + QAL HPWL ++ +
Sbjct: 392 RKLLLADP--NTRMT--------------IHQALEHPWLT--PGNAPGRDSQIPSSRYTK 433
Query: 379 YYNLYKDWYGNA--AVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRD 436
+ K Y + R +S H + + + + +
Sbjct: 434 IRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFW--DRSEAQPRFIVKPYG 491
Query: 437 VKTWEDN 443
+ E
Sbjct: 492 TEVGEGQ 498
Score = 31.0 bits (70), Expect = 3.4
Identities = 13/81 (16%), Positives = 22/81 (27%)
Query: 849 RRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIG 908
+ + + + R + + + R P F KP V G
Sbjct: 438 IKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEG 497
Query: 909 DKLEMKCLAVGEPKPVIQWFK 929
C + PV+ W K
Sbjct: 498 QSANFYCRVIASSPPVVTWHK 518
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 181 bits (461), Expect = 1e-50
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNE 230
+ + + D YD G+ELG G IV E+S+G YAAK + + + + E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ Q+ H N++ LHD YE + +I EL GGEL L ++ +E + +I+Q+L
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHLLLTDFGLSRRI 332
G++Y+H IAH L P ++++ H+ L DFGL+ I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Score = 115 bits (290), Expect = 4e-28
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 21/150 (14%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGCTQRV-------T 999
+ +LDG+ YLH + + H +++P+N+++ +KLID G +
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GT PEF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET
Sbjct: 178 IFGT---------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 1060 NVNFVRYRFEY-LFKELTQEATRFL--MLI 1086
N+ V Y F+ F ++ A F+ +L+
Sbjct: 229 NITSVSYDFDEEFFSHTSELAKDFIRKLLV 258
Score = 97.7 bits (244), Expect = 5e-22
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F+ F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG-NRLKEFS 1257
++ A F+ +L+ + KR T++E + W+ P + R + ++
Sbjct: 246 SELAKDFIRKLLV--KETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY 301
Score = 83.5 bits (207), Expect = 3e-17
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHL 521
GGEL L ++ +E + +I+Q+L G++Y+H IAH L P ++++ H+
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 522 LLTDFGLSRRI 532
L DFGL+ I
Sbjct: 159 KLIDFGLAHEI 169
Score = 66.5 bits (163), Expect = 1e-11
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF-------EYSHDTLHQVNT 642
+ D Y E+ G+F++V K EK+ T AAK + ++
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 643 EFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATI 702
E LR + H + +L + Y+ +++ VL++E + G ++ +L+ + +E+ +
Sbjct: 65 EVSILRQVLHHNVITLHDVYE---NRTDV-VLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 703 ISQ 705
I Q
Sbjct: 121 IKQ 123
Score = 65.7 bits (161), Expect = 2e-11
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ + + D YD G+ELG G IV E+S+G YAAK + + + + V E+ E E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Score = 31.8 bits (73), Expect = 1.3
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 18/64 (28%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPK--LNTDAL 376
R LL+ + +R+T +++ALRHPW+ D + + +N +
Sbjct: 254 RKLLVKE--TRKRLT--------------IQEALRHPWITPVDNQQAMVRRESVVNLENF 297
Query: 377 RNYY 380
R Y
Sbjct: 298 RKQY 301
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 179 bits (456), Expect = 6e-50
Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNE 230
R + + D YD G+ELG G +V E+S+G YAAK + + + + + E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ ++ H N++ LH+ YE K +I EL GGEL L + TE + +++Q+L
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHLLLTDFGLSRRI 332
+G+ Y+H L IAH L P ++++ + + DFGL+ +I
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Score = 115 bits (291), Expect = 4e-28
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 21/150 (14%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS--VRSVQVKLIDLGCTQRV-------T 999
+ +L+G+ YLH + H +++P+N+++ V ++K+ID G ++
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GT PEF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET
Sbjct: 177 IFGT---------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 1060 NVNFVRYRFEY-LFKELTQEATRFL--MLI 1086
NV+ V Y FE F + A F+ +L+
Sbjct: 228 NVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Score = 98.5 bits (246), Expect = 3e-22
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET NV+ V Y FE F
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG-NRLKEF 1256
+ A F+ +L+ + P KR T+++ ++ W+ P + +A + + K+F
Sbjct: 245 SALAKDFIRRLLV--KDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKF 299
Score = 82.3 bits (204), Expect = 8e-17
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHL 521
GGEL L + TE + +++Q+L+G+ Y+H L IAH L P ++++ +
Sbjct: 98 GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 522 LLTDFGLSRRI 532
+ DFGL+ +I
Sbjct: 158 KIIDFGLAHKI 168
Score = 65.4 bits (160), Expect = 3e-11
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
R + + D YD G+ELG G +V E+S+G YAAK + + T S V ED E E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Score = 65.0 bits (159), Expect = 4e-11
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-------LFEYSHDTLHQVN 641
+ E D Y E+ G+F+VV K EK+ T AAK + +
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 642 TEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVAT 701
E L+ ++H + +L E Y+ +++ +L++E + G ++ +L+ + TE+
Sbjct: 63 REVSILKEIQHPNVITLHEVYE---NKTDV-ILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 702 IISQ 705
+ Q
Sbjct: 119 FLKQ 122
Score = 29.5 bits (67), Expect = 6.7
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 341 LEYDV--RY-VRQALRHPWLNFADRKPTEDTPK--LNTDALRNY 379
L D R ++ +L+HPW+ D + +N + + +
Sbjct: 256 LVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKF 299
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 179 bits (457), Expect = 9e-50
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNE 230
+ + + D YD G+ELG G IV E+S+G YAAK + + + + E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ I+ Q+ H N++ LHD YE + +I EL GGEL L ++ +E + +I+Q+L
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
G++Y+H IAH L P ++++ H+ L DFGL+ I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Score = 115 bits (291), Expect = 7e-28
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 21/150 (14%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS--VRSVQVKLIDLGCTQRV-------T 999
+ +LDG+ YLH + + H +++P+N+++ + +KLID G +
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GT PEF APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET
Sbjct: 178 IFGT---------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 1060 NVNFVRYRFEY-LFKELTQEATRFL--MLI 1086
N+ V Y F+ F + ++ A F+ +L+
Sbjct: 229 NITAVSYDFDEEFFSQTSELAKDFIRKLLV 258
Score = 98.2 bits (245), Expect = 6e-22
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G ++ ET N+ V Y F+ F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG-NRLKEFSDE 1259
++ A F+ +L+ + KR T++E + W+ P + R + K+
Sbjct: 246 SELAKDFIRKLLV--KETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQY-- 301
Query: 1260 YHDLKNK------------QFTSDSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDS 1307
++ + T + +H + E P S
Sbjct: 302 ---VRRRWKLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKALHPRRRS 358
Query: 1308 ST 1309
ST
Sbjct: 359 ST 360
Score = 82.4 bits (204), Expect = 1e-16
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHL 521
GGEL L ++ +E + +I+Q+L G++Y+H IAH L P ++++ H+
Sbjct: 99 GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 522 LLTDFGLSRRI 532
L DFGL+ I
Sbjct: 159 KLIDFGLAHEI 169
Score = 66.2 bits (162), Expect = 2e-11
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF-------EYSHDTLHQVN 641
+ + D Y E+ G+F++V K EK+ T AAK ++
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVCREEIE 63
Query: 642 TEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVAT 701
E LR + H I +L + Y+ +++ VL++E + G ++ +L+ + +E+ +
Sbjct: 64 REVSILRQVLHPNIITLHDVYE---NRTDV-VLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 702 IISQ 705
I Q
Sbjct: 120 FIKQ 123
Score = 65.5 bits (160), Expect = 4e-11
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ + + D YD G+ELG G IV E+S+G YAAK + + + + V E+ E E
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65
Score = 31.2 bits (71), Expect = 2.5
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 18/64 (28%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPK--LNTDAL 376
R LL+ + +R+T +++ALRHPW+ D + + +N +
Sbjct: 254 RKLLVKE--TRKRLT--------------IQEALRHPWITPVDTQQAMVRRESVVNLENF 297
Query: 377 RNYY 380
+ Y
Sbjct: 298 KKQY 301
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 174 bits (444), Expect = 8e-49
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNELDIM 234
+ D Y+ G+ELG G IV ++ +G+ YAAK + + + + + E++I+
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 235 NQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
++ H N++ LHD +E K +I EL GGEL L + TE + +++Q+L G+
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 295 YMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
Y+H IAH L P ++++ + L DFG++ +I
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162
Score = 114 bits (288), Expect = 4e-28
Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 21/150 (14%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS--VRSVQVKLIDLGCTQRV-------T 999
+ +LDG+ YLH + + H +++P+N+++ V + ++KLID G ++
Sbjct: 111 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
GT PEF APE++ EP+ + D+WS GV+ Y+LLSGASPF G+++ ET
Sbjct: 171 IFGT---------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 221
Query: 1060 NVNFVRYRFEY-LFKELTQEATRFL--MLI 1086
N++ V Y F+ F ++ A F+ +L+
Sbjct: 222 NISAVNYDFDEEYFSNTSELAKDFIRRLLV 251
Score = 94.2 bits (235), Expect = 4e-21
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APE++ EP+ + D+WS GV+ Y+LLSGASPF G+++ ET N++ V Y F+ F
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 238
Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
++ A F+ +L+ + P +R T+ + E+ W+
Sbjct: 239 SELAKDFIRRLLV--KDPKRRMTIAQSLEHSWI 269
Score = 81.8 bits (203), Expect = 5e-17
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHL 521
GGEL L + TE + +++Q+L G+ Y+H IAH L P ++++ +
Sbjct: 92 GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 151
Query: 522 LLTDFGLSRRI 532
L DFG++ +I
Sbjct: 152 KLIDFGIAHKI 162
Score = 62.2 bits (152), Expect = 2e-10
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-------LFEYSHDTLHQVNTEFDNL 647
D Y+ E+ G+F++V K +K T AAK + ++ E + L
Sbjct: 4 EDHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 648 RSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
R +RH I +L + ++ +++ VL++E + G ++ +L+ + TE + Q
Sbjct: 63 REIRHPNIITLHDIFE---NKTDV-VLILELVSGGELFDFLAEKESLTEDEATQFLKQ 116
Score = 61.0 bits (149), Expect = 5e-10
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+ D Y+ G+ELG G IV ++ +G+ YAAK + + S V E+ E E
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 58
Score = 29.5 bits (67), Expect = 6.3
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 16/46 (34%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKP 364
R LL+ D RR+T + Q+L H W+ R+
Sbjct: 247 RRLLVKD--PKRRMT--------------IAQSLEHSWIKAIRRRN 276
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 158 bits (401), Expect = 7e-43
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ 236
+T I + F + LG G V+ +R +G+ +A K + S +NE+ ++ +
Sbjct: 3 QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK 62
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
+ H N+V L D YE+ + ++ +L GGEL + + YTE D + I+Q+LS + Y+
Sbjct: 63 IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 297 HRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSR 330
H I H L P +LL P +++TDFGLS+
Sbjct: 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157
Score = 86.9 bits (216), Expect = 2e-18
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 945 THKDA-YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV---- 998
T KDA + VL ++YLH G+ H +++P+N++ + ++ + D G ++
Sbjct: 104 TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163
Query: 999 --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
T GT P + APEVLA++P D WS GV+ Y+LL G PF ++E +
Sbjct: 164 MSTACGT---------PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK 214
Query: 1057 TRQNVNFVRYRFE 1069
+ + Y FE
Sbjct: 215 LFEKIKEGYYEFE 227
Score = 75.7 bits (187), Expect = 8e-15
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--EYLFKE 1201
APEVLA++P D WS GV+ Y+LL G PF ++E + + + Y F + + +
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPF-WDD 233
Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
+++ A F+ + ++ P +R T E+ + W+ + + + +V ++++
Sbjct: 234 ISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVS--LQIQKNF 287
Score = 71.4 bits (176), Expect = 3e-13
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHL 521
GGEL + + YTE D + I+Q+LS + Y+H I H L P +LL P +
Sbjct: 89 SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKI 148
Query: 522 LLTDFGLSR 530
++TDFGLS+
Sbjct: 149 MITDFGLSK 157
Score = 55.3 bits (134), Expect = 5e-08
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE-YSHDTLHQVNTEFDNLRS 649
T + F+ + G FS V ++ T L A K + + E L+
Sbjct: 4 TTNIRKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKK 62
Query: 650 LRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE- 708
++HE I +L + Y+ + ++ LVM+ + G ++ + R YTE++ + +I Q
Sbjct: 63 IKHENIVTLEDIYE---STTHY-YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA 118
Query: 709 -HYL 711
YL
Sbjct: 119 VKYL 122
Score = 53.7 bits (130), Expect = 1e-07
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
+T I + F + LG G V+ +R +G+ +A K I S ENE
Sbjct: 3 QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKC------IKKSPAFRDSSLENE 56
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 154 bits (392), Expect = 6e-42
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Query: 168 YARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKS 225
++ GR+ + Y+ LG+G G V +R + + YA KV+ N+ S
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS 66
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY 285
E++++ +L H N+++L + E SF I+ EL GGEL + ++ ++E+D A
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI 126
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFGKLN 339
I+Q+ SG+ YMH+ +I H L P ++L+ + + DFGLS K+
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
Score = 81.1 bits (201), Expect = 1e-16
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRV-------TK 1000
A + V G+ Y+H + H +++P+N+++ S +K+ID G + +
Sbjct: 124 ARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
+GT + APEVL + DVWSAGV+ Y+LLSG PF G++E + +
Sbjct: 184 IGT---------AYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233
Query: 1061 VNFVRYRFE 1069
V +Y F+
Sbjct: 234 VETGKYAFD 242
Score = 68.8 bits (169), Expect = 1e-12
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + ++ ++E+D A I+Q+ SG+ YMH+ +I H L P ++L+ +
Sbjct: 105 GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164
Query: 523 LTDFGLSRRITSFGKLN 539
+ DFGLS K+
Sbjct: 165 IIDFGLSTCFQQNTKMK 181
Score = 64.6 bits (158), Expect = 4e-11
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEVL + DVWSAGV+ Y+LLSG PF G++E + + V +Y F+ ++ +
Sbjct: 191 APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ +A + + P R T +C E+ W+
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 60.7 bits (148), Expect = 6e-10
Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDN 646
++Y + + +G F V+K ++ T+ A K+ + + E +
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVEL 74
Query: 647 LRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
L+ L H I L E + +S+ +V E G ++ + R ++E + A II Q
Sbjct: 75 LKKLDHPNIMKLFEILE---DSSSFY-IVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129
Score = 54.5 bits (132), Expect = 7e-08
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 43 YARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
++ GR+ + Y+ LG+G G V +R + + YA KV
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKV 54
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 154 bits (391), Expect = 9e-42
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 178 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKNELD 232
+ +D YD +ELG+G +V V +++G +AAK+ ++ + Q + E
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREAR 57
Query: 233 IMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
I +L H N+VRLHDS + + ++ +L GGEL + + +Y+E D +H I+Q+L
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 117
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
+ Y H I H L P +LL+A G + L DFGL+ +
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158
Score = 89.2 bits (222), Expect = 2e-19
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 17/129 (13%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRV-------TK 1000
++C+ +L+ + Y H G+ H N++P+N+++AS + VKL D G V
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GT P + +PEVL ++P D+W+ GV+ Y+LL G PF + +
Sbjct: 168 AGT---------PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 218
Query: 1061 VNFVRYRFE 1069
+ Y +
Sbjct: 219 IKAGAYDYP 227
Score = 71.4 bits (176), Expect = 2e-13
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--EYLFKE 1201
+PEVL ++P D+W+ GV+ Y+LL G PF + + + Y + +
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE-WDT 233
Query: 1202 LTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
+T EA + ML P KR T ++ + W+
Sbjct: 234 VTPEAKSLIDSMLT--VNPKKRITADQALKVPWI 265
Score = 70.3 bits (173), Expect = 4e-13
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + +Y+E D +H I+Q+L + Y H I H L P +LL+A G +
Sbjct: 89 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 148
Query: 523 LTDFGLSRRI 532
L DFGL+ +
Sbjct: 149 LADFGLAIEV 158
Score = 58.7 bits (143), Expect = 3e-09
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Query: 591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDNL 647
+ +D Y E+ +G FSVV + K T AAK+ S ++ E
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARIC 59
Query: 648 RSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
R L+H I L ++ + S LV + + G ++ + +R Y+E + + I Q
Sbjct: 60 RKLQHPNIVRLHDSIQ---EESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 113
Score = 53.7 bits (130), Expect = 1e-07
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 53 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ +D YD +ELG+G +V V +++G +AAK++
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII 39
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 154 bits (391), Expect = 2e-41
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 169 ARGRQVKTRTKPITDAYDF-GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKS 225
+ + Y ELGRG +V + +S+G+ YAAK + +G ++
Sbjct: 14 GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA 73
Query: 226 LFKNELDIMNQLCHR-NLVRLHDSYETKDSFTIISELAGGGELLHSLT--RQSYYTEYDI 282
+E+ ++ ++ LH+ YE +I E A GGE+ +E D+
Sbjct: 74 EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV 133
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
I+Q+L G+ Y+H+ +I HL L P ++L++ + + DFG+SR+I
Sbjct: 134 IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
Score = 114 bits (288), Expect = 1e-27
Identities = 45/149 (30%), Positives = 84/149 (56%), Gaps = 20/149 (13%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV-------TK 1000
+ +L+G+ YLH + HL+++P N++++S+ +K++D G ++++
Sbjct: 134 IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI 193
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
+GT PE+ APE+L +PI TD+W+ G++AY+LL+ SPF G+ ET N
Sbjct: 194 MGT---------PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN 244
Query: 1061 VNFVRYRFEY-LFKELTQEATRFL--MLI 1086
++ V + F ++Q AT F+ +L+
Sbjct: 245 ISQVNVDYSEETFSSVSQLATDFIQSLLV 273
Score = 97.3 bits (243), Expect = 6e-22
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APE+L +PI TD+W+ G++AY+LL+ SPF G+ ET N++ V + F +
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV 260
Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
+Q AT F+ +L+ + P KRPT E C + WL ++ ++ ++ S
Sbjct: 261 SQLATDFIQSLLV--KNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHS 315
Score = 72.3 bits (178), Expect = 2e-13
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 464 GGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGE+ +E D+ I+Q+L G+ Y+H+ +I HL L P ++L++
Sbjct: 113 GGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGD 172
Query: 522 L-LTDFGLSRRI 532
+ + DFG+SR+I
Sbjct: 173 IKIVDFGMSRKI 184
Score = 55.3 bits (134), Expect = 5e-08
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 590 STEPPTDKYQFIS-EIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFD 645
S E + Y S E+ RGKF+VV + K+ T AAK + D ++ E
Sbjct: 22 SMENFNNFYILTSKELGRGKFAVVRQCISKS-TGQEYAAKFLKKRRRGQDCRAEILHEIA 80
Query: 646 NLRSLRH-ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--YTEQNVATI 702
L + R+ +L E Y+ S I +L++E G ++ S +E +V +
Sbjct: 81 VLELAKSCPRVINLHEVYE---NTSEI-ILILEYAAGGEIFSLCLPELAEMVSENDVIRL 136
Query: 703 ISQ 705
I Q
Sbjct: 137 IKQ 139
Score = 50.7 bits (122), Expect = 1e-06
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 44 ARGRQVKTRTKPITDAYDF-GDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ + Y ELGRG +V + +S+G+ YAAK +
Sbjct: 14 GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFL 62
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 154 bits (392), Expect = 5e-41
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 170 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYK 224
+ + +D YD +ELG+G +V V +++G +AAK+ ++ + Q
Sbjct: 16 GSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-- 73
Query: 225 SLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH 284
+ E I +L H N+VRLHDS + + ++ +L GGEL + + +Y+E D +H
Sbjct: 74 -KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
I+Q+L + Y H I H L P +LL+A G + L DFGL+ +
Sbjct: 133 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
Score = 90.8 bits (226), Expect = 2e-19
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRV-------TK 1000
++C+ +L+ + Y H G+ H N++P+N+++AS VKL D G V
Sbjct: 131 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GT P + +PEVL ++P D+W+ GV+ Y+LL G PF + +
Sbjct: 191 AGT---------PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 241
Query: 1061 VNFVRYRFE 1069
+ Y +
Sbjct: 242 IKAGAYDYP 250
Score = 79.3 bits (196), Expect = 1e-15
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 14/170 (8%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--EYLFKE 1201
+PEVL ++P D+W+ GV+ Y+LL G PF + + + Y + +
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE-WDT 256
Query: 1202 LTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDE 1259
+T EA + ML P KR T ++ + W+ E + R + + LK+F+
Sbjct: 257 VTPEAKSLIDSMLT--VNPKKRITADQALKVPWICNRERVASAIHRQDTV-DCLKKFNA- 312
Query: 1260 YHDLKNKQFTSDSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDSST 1309
+ K L+++ T SN + L K SS+SS
Sbjct: 313 ----RRK-LKGAILTTMIATRNLSNLGRNLLNKKEQGPPSTIKESSESSQ 357
Score = 70.4 bits (173), Expect = 9e-13
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + +Y+E D +H I+Q+L + Y H I H L P +LL+A G +
Sbjct: 112 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 171
Query: 523 LTDFGLSRRI 532
L DFGL+ +
Sbjct: 172 LADFGLAIEV 181
Score = 57.3 bits (139), Expect = 2e-08
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDNLRSLR 651
+D Y E+ +G FSVV + K T AAK+ S ++ E R L+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
H I L ++ + S LV + + G ++ + +R Y+E + + I Q
Sbjct: 87 HPNIVRLHDSIQ---EESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 136
Score = 54.2 bits (131), Expect = 1e-07
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 45 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
+ + +D YD +ELG+G +V V +++G +AAK+
Sbjct: 16 GSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 154 bits (390), Expect = 6e-41
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIM 234
+ ++D ++ ELGRG T IVY ++ + + YA KV+ + K + + E+ ++
Sbjct: 45 GSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD--KKIVRTEIGVL 102
Query: 235 NQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
+L H N+++L + +ET +++ EL GGEL + + YY+E D A ++Q+L +
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVA 162
Query: 295 YMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
Y+H I H L P +LL A P L + DFGLS+ +
Sbjct: 163 YLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201
Score = 83.9 bits (208), Expect = 3e-17
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 19/135 (14%)
Query: 945 THKDA-YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV---- 998
+ +DA V +L+ + YLH G+ H +++P+N++ A+ +K+ D G ++ V
Sbjct: 146 SERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205
Query: 999 ---TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ-SE 1054
T GT P + APE+L P+ D+WS G++ Y+LL G PF + +
Sbjct: 206 LMKTVCGT---------PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD 256
Query: 1055 PETRQNVNFVRYRFE 1069
+ + Y F
Sbjct: 257 QFMFRRILNCEYYFI 271
Score = 70.1 bits (172), Expect = 1e-12
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ-SEPETRQNVNFVRYRF--EYLFK 1200
APE+L P+ D+WS G++ Y+LL G PF + + + + Y F + +
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPW-WD 276
Query: 1201 ELTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
E++ A + +++ P KR T + ++ W+ + A +L+EF+
Sbjct: 277 EVSLNAKDLVRKLIVLD--PKKRLTTFQALQHPWVTGKAANFVHMDTAQ---KKLQEFN 330
Score = 70.1 bits (172), Expect = 1e-12
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + YY+E D A ++Q+L + Y+H I H L P +LL A P L
Sbjct: 132 GGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLK 191
Query: 523 LTDFGLSRRI 532
+ DFGLS+ +
Sbjct: 192 IADFGLSKIV 201
Score = 58.5 bits (142), Expect = 6e-09
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 564 EAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTEN 623
++ + T + P + + + + +D ++ SE+ RG S+V + +K T+
Sbjct: 21 QSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKG-TQK 79
Query: 624 LVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGAD 683
A K+ + + D V TE L L H I L E ++ T + I LV+E + G +
Sbjct: 80 PYALKVLKKTVDK-KIVRTEIGVLLRLSHPNIIKLKEIFE---TPTEI-SLVLELVTGGE 134
Query: 684 VLSYLSSRHEYTEQNVATIISQ 705
+ + + Y+E++ A + Q
Sbjct: 135 LFDRIVEKGYYSERDAADAVKQ 156
Score = 50.8 bits (122), Expect = 1e-06
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 50 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ ++D ++ ELGRG T IVY ++ + + YA KV+
Sbjct: 45 GSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL 86
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 153 bits (388), Expect = 1e-40
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 10/176 (5%)
Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLF 227
+ D Y+ + +G+G +V + R +G+ +A K+ T
Sbjct: 14 DMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL 73
Query: 228 KNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ----SYYTEYDIA 283
K E I + L H ++V L ++Y + ++ E G +L + ++ Y+E +
Sbjct: 74 KREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKL 338
HY+RQ+L L Y H +I H + P +L+A + L FG++ ++ G +
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV 189
Score = 87.7 bits (218), Expect = 2e-18
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHP 1007
++ + +L+ L+Y H + H +++P V++AS S VKL G ++ + G +
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 1008 I-NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
TP F APEV+ EP DVW GV+ ++LLSG PF G E + + +Y
Sbjct: 193 RVGTP--HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKY 249
Query: 1067 RFE 1069
+
Sbjct: 250 KMN 252
Score = 73.9 bits (182), Expect = 6e-14
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
APEV+ EP DVW GV+ ++LLSG PF G E + + +Y+ + +
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHI 259
Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
++ A + ML+ P +R TV E + WL + K + +L++F+
Sbjct: 260 SESAKDLVRRMLM--LDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFN 313
Score = 65.4 bits (160), Expect = 3e-11
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 464 GGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
G +L + ++ Y+E +HY+RQ+L L Y H +I H + P +L+A
Sbjct: 110 GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 169
Query: 520 HLL-LTDFGLSRRITSFGKL 538
+ L FG++ ++ G +
Sbjct: 170 APVKLGGFGVAIQLGESGLV 189
Score = 58.1 bits (141), Expect = 9e-09
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 48 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVED 107
+ D Y+ + +G+G +V + R +G+ +A K++ + S + ED
Sbjct: 14 DMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVD-VAKFTSSPGLSTED 72
Query: 108 NENE 111
+ E
Sbjct: 73 LKRE 76
Score = 57.7 bits (140), Expect = 9e-09
Identities = 31/144 (21%), Positives = 50/144 (34%), Gaps = 22/144 (15%)
Query: 572 AQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK--- 628
L+ + +D E D Y+ I +G FSVV + + T A K
Sbjct: 7 GGGGGILDMADDDVLFE-------DVYELCEVIGKGPFSVVRRCINRE-TGQQFAVKIVD 58
Query: 629 ---LFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVL 685
+ + E L+H I LLE Y + + +V E + GAD+
Sbjct: 59 VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS---SDGML-YMVFEFMDGADLC 114
Query: 686 SYLSSR----HEYTEQNVATIISQ 705
+ R Y+E + + Q
Sbjct: 115 FEIVKRADAGFVYSEAVASHYMRQ 138
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 154 bits (391), Expect = 3e-40
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDI 233
T+ Y +ELG+G +V V+ +G+ YAA ++ K + + E I
Sbjct: 4 ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI 63
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
L H N+VRLHDS + +I +L GGEL + + YY+E D +H I+Q+L +
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 123
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFGKL 338
+ H++ + H L P +LL+A G + L DFGL+ + +
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 169
Score = 89.7 bits (223), Expect = 1e-18
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 945 THKDA-YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRV---- 998
+ DA +C+ +L+ + + H G+ H N++P+N+++AS VKL D G V
Sbjct: 108 SEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
Query: 999 ----TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
GT P + +PEVL ++P D+W+ GV+ Y+LL G PF + +
Sbjct: 168 QAWFGFAGT---------PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218
Query: 1055 PETRQNVNFVRYRFE 1069
Q + Y F
Sbjct: 219 HRLYQQIKAGAYDFP 233
Score = 77.0 bits (190), Expect = 1e-14
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--EYLFKE 1201
+PEVL ++P D+W+ GV+ Y+LL G PF + + Q + Y F +
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE-WDT 239
Query: 1202 LTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
+T EA + ML P KR T E ++ W+ + R + + LK+F+
Sbjct: 240 VTPEAKDLINKMLT--INPSKRITAAEALKHPWISHRSTVASCMHRQETV-DCLKKFN 294
Score = 70.0 bits (172), Expect = 2e-12
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
GGEL + + YY+E D +H I+Q+L + + H++ + H L P +LL+A G +
Sbjct: 94 GGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVK 153
Query: 523 LTDFGLSRRITSFGKL 538
L DFGL+ + +
Sbjct: 154 LADFGLAIEVEGEQQA 169
Score = 56.5 bits (137), Expect = 4e-08
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDNLRSLR 651
T++YQ E+ +G FSVV + + AA + S ++ E R L+
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVL-AGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
H I L ++ + L+ + + G ++ + +R Y+E + + I Q
Sbjct: 69 HPNIVRLHDSIS---EEGHHY-LIFDLVTGGELFEDIVAREYYSEADASHCIQQ 118
Score = 54.6 bits (132), Expect = 1e-07
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
T+ Y +ELG+G +V V+ +G+ YAA +
Sbjct: 4 ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMI 43
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 149 bits (378), Expect = 3e-40
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN 235
+ I Y + +GRG G V AV++ + AAK + + FK E++IM
Sbjct: 2 STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 61
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
L H N++RL++++E ++ EL GGEL + + + E D A ++ +LS + Y
Sbjct: 62 SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
H+L++AH L P + L L L DFGL+ R
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159
Score = 83.8 bits (208), Expect = 1e-17
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV-------TK 1000
A + VL + Y H + H +++P+N + + +KLID G R TK
Sbjct: 109 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK 168
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
+GT P + +P+VL E P+ D WSAGV+ YVLL G PF ++ E
Sbjct: 169 VGT---------PYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLK 218
Query: 1061 VNFVRYRFE 1069
+ + F
Sbjct: 219 IREGTFTFP 227
Score = 69.2 bits (170), Expect = 1e-12
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
+P+VL E P+ D WSAGV+ YVLL G PF ++ E + + F + +
Sbjct: 176 SPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNV 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ +A + + ++P +R T + E+ W
Sbjct: 235 SPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
Score = 68.0 bits (167), Expect = 2e-12
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GGEL + + + E D A ++ +LS + Y H+L++AH L P + L L
Sbjct: 90 GGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLK 149
Query: 523 LTDFGLSRRI 532
L DFGL+ R
Sbjct: 150 LIDFGLAARF 159
Score = 59.1 bits (144), Expect = 2e-09
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-DTLHQVNTEFDNLR 648
+ Y + I RG + V A +K T AAK + + + E + ++
Sbjct: 3 TKGDINQYYTLENTIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 61
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
SL H I L E ++ ++I LVME G ++ + + + E + A I+
Sbjct: 62 SLDHPNIIRLYETFE---DNTDI-YLVMELCTGGELFERVVHKRVFRESDAARIMKD 114
Score = 50.7 bits (122), Expect = 1e-06
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNEN 110
+ I Y + +GRG G V AV++ + AAK I V+ +
Sbjct: 2 STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKK------IPKYFVEDVDRFKQ 55
Query: 111 E 111
E
Sbjct: 56 E 56
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 154 bits (391), Expect = 7e-40
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFK 228
GR+ + Y+ LG+G G V +R + + YA KV+ N+ S
Sbjct: 10 GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL 69
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
E++++ +L H N+++L + E SF I+ EL GGEL + ++ ++E+D A I+Q
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRI 332
+ SG+ YMH+ +I H L P ++L+ + + DFGLS
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174
Score = 87.8 bits (218), Expect = 5e-18
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
A + V G+ Y+H + H +++P+N+++ S +K+ID G + + +
Sbjct: 124 ARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
I T + APEVL + DVWSAGV+ Y+LLSG PF G++E + + V +Y
Sbjct: 184 IGTAY--YIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240
Query: 1068 FEYL-FKELTQEA 1079
F+ ++ ++ +A
Sbjct: 241 FDLPQWRTISDDA 253
Score = 78.2 bits (193), Expect = 7e-15
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
APEVL + DVWSAGV+ Y+LLSG PF G++E + + V +Y F+ ++ +
Sbjct: 191 APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG---NRLKEFS 1257
+ +A + + P R T +C E+ W+ L +++F
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQ 307
Score = 68.9 bits (169), Expect = 5e-12
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
GGEL + ++ ++E+D A I+Q+ SG+ YMH+ +I H L P ++L+ +
Sbjct: 105 GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164
Query: 523 LTDFGLSRRI 532
+ DFGLS
Sbjct: 165 IIDFGLSTCF 174
Score = 63.9 bits (156), Expect = 2e-10
Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDN 646
++Y + + +G F V+K ++ T+ A K + + E +
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVEL 74
Query: 647 LRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
L+ L H I L E + +S+ +V E G ++ + R ++E + A II Q
Sbjct: 75 LKKLDHPNIMKLFEILE---DSSSFY-IVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129
Score = 54.7 bits (132), Expect = 1e-07
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 46 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
GR+ + Y+ LG+G G V +R + + YA KV
Sbjct: 10 GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKV 54
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 148 bits (376), Expect = 8e-40
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKN 229
GR+ I D + F +LG G G V+ ERSSG K + + +
Sbjct: 10 GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA 69
Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLH----SLTRQSYYTEYDIAHY 285
E++++ L H N++++ + +E + I+ E GGELL + R +E +A
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITS 334
++Q+++ L Y H + H L P ++L + + DFGL+ S
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179
Score = 93.8 bits (234), Expect = 6e-21
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRV-------TK 1000
A + +++ L Y H + + H +++P+N++ +K+ID G +
Sbjct: 127 AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA 186
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
GT + APEV + + + D+WSAGV+ Y LL+G PF G S E +Q
Sbjct: 187 AGT---------ALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK 236
Query: 1061 VNFVRYRFEYLFKELTQEA 1079
+ + + LT +A
Sbjct: 237 ATYKEPNYAVECRPLTPQA 255
Score = 78.0 bits (193), Expect = 1e-15
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEV + + + D+WSAGV+ Y LL+G PF G S E +Q + + + LT
Sbjct: 194 APEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLT 252
Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+A L + + P +RP+ + + W
Sbjct: 253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
Score = 62.3 bits (152), Expect = 2e-10
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 464 GGELLH----SLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
GGELL + R +E +A ++Q+++ L Y H + H L P ++L
Sbjct: 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPH 163
Query: 520 HLL-LTDFGLSRRITS 534
+ + DFGL+ S
Sbjct: 164 SPIKIIDFGLAELFKS 179
Score = 55.7 bits (135), Expect = 3e-08
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE--YSHDTLHQVNTEFDNL 647
D + F ++ G F V E++ + K S + Q+ E + L
Sbjct: 16 FQGTIDDLFIFKRKLGSGAFGDVHLVEERS-SGLERVIKTINKDRSQVPMEQIEAEIEVL 74
Query: 648 RSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGAD----VLSYLSSRHEYTEQNVATII 703
+SL H I + E ++ N+ +VME +G + ++S + +E VA ++
Sbjct: 75 KSLDHPNIIKIFEVFE---DYHNM-YIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130
Query: 704 SQ 705
Q
Sbjct: 131 KQ 132
Score = 54.5 bits (132), Expect = 8e-08
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 46 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
GR+ I D + F +LG G G V+ ERSSG K
Sbjct: 10 GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKT 54
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 152 bits (387), Expect = 2e-39
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFK 228
V+ T +D Y LG+G G V ++ +G+ A KV + K ++
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--LL 74
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
E+ ++ QL H N+++L++ +E K F ++ E+ GGEL + + ++E D A IRQ
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 134
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRITSFGKLN 339
+LSG+ YMH+ I H L P +LL+ ++ + DFGLS + K+
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 186
Score = 90.5 bits (225), Expect = 7e-19
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G+ Y+H + H +++P+N+++ S +++ID G + +
Sbjct: 129 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
I T + APEVL + DVWS GV+ Y+LLSG PF G +E + + V +Y
Sbjct: 189 IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 1068 FEYL-FKELTQEA 1079
FE +K++++ A
Sbjct: 246 FELPQWKKVSESA 258
Score = 78.6 bits (194), Expect = 5e-15
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 23/175 (13%)
Query: 1098 NNIDHEFWHVKDLKRETNYTFRLSAKN----VI--GWSEKGIPSALFKTKE-----QAPE 1146
N I H +DLK E N +K+ +I G S S K K APE
Sbjct: 145 NKIVH-----RDLKPE-NLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 198
Query: 1147 VLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKELTQE 1205
VL + DVWS GV+ Y+LLSG PF G +E + + V +Y FE +K++++
Sbjct: 199 VL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 1206 ATRFLMLIFKRAPGKRPTVEECHENRWLV---PSEYMIKKRERAVFLGNRLKEFS 1257
A + + P R + + ++ W+ + + + +++F
Sbjct: 258 AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAI-LNIRQFQ 311
Score = 68.2 bits (167), Expect = 8e-12
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
GGEL + + ++E D A IRQ+LSG+ YMH+ I H L P +LL+ ++
Sbjct: 110 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIR 169
Query: 523 LTDFGLSRRITSFGKLN 539
+ DFGLS + K+
Sbjct: 170 IIDFGLSTHFEASKKMK 186
Score = 65.9 bits (161), Expect = 4e-11
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Query: 587 IEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTLHQVNT 642
++ ST +D+Y+ + +G F V+ +K T A K+ +
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 75
Query: 643 EFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATI 702
E L+ L H I L E ++ LV E G ++ + SR ++E + A I
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFE---DKGYFY-LVGEVYTGGELFDEIISRKRFSEVDAARI 131
Query: 703 ISQ 705
I Q
Sbjct: 132 IRQ 134
Score = 54.3 bits (131), Expect = 2e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 49 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
V+ T +D Y LG+G G V ++ +G+ A KV
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKV 58
Score = 30.4 bits (69), Expect = 4.8
Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 16/60 (26%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRN 378
R +L S RI+ R AL H W+ ++ +A+ N
Sbjct: 263 RKMLTYVP--SMRIS--------------ARDALDHEWIQTYTKEQISVDVPSLDNAILN 306
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 152 bits (386), Expect = 3e-39
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 170 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLF 227
G + ++ +++ Y +LG G G V ++ + A K++ T S
Sbjct: 24 PGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKL 83
Query: 228 KNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIR 287
E+ ++ L H N+++L+D +E K ++ ++ E GGEL + + + E D A I+
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRI 332
Q+LSG+ Y+H+ +I H L P +LL+ + + DFGLS
Sbjct: 144 QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
Score = 90.5 bits (225), Expect = 8e-19
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
A + VL G+ YLH + H +++P+N+++ S +K++D G + +
Sbjct: 139 AVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER 198
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
+ T + APEVL + + DVWS GV+ ++LL+G PF GQ++ E + V +Y
Sbjct: 199 LGTAY--YIAPEVL-RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT 255
Query: 1068 FEYL-FKELTQEA 1079
F+ +K +++ A
Sbjct: 256 FDSPEWKNVSEGA 268
Score = 78.2 bits (193), Expect = 6e-15
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
APEVL + + DVWS GV+ ++LL+G PF GQ++ E + V +Y F+ +K +
Sbjct: 206 APEVL-RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV 264
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL----VPSEYMIKKRERAVFLGNRLKEFS 1257
++ A + + + +R + ++ E+ W+ E I+ A + +++F
Sbjct: 265 SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAI-ENMRKFQ 322
Score = 67.4 bits (165), Expect = 1e-11
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
GGEL + + + E D A I+Q+LSG+ Y+H+ +I H L P +LL+ +
Sbjct: 120 GGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIK 179
Query: 523 LTDFGLSRRI 532
+ DFGLS
Sbjct: 180 IVDFGLSAVF 189
Score = 65.9 bits (161), Expect = 5e-11
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 587 IEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTE 643
I ++ YQ + ++ G + V+ +K T A K+ S + ++ E
Sbjct: 28 ITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKV-THVERAIKIIRKTSVSTSSNSKLLEE 86
Query: 644 FDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATII 703
L+ L H I L + ++ N LVME +G ++ + R ++ E + A II
Sbjct: 87 VAVLKLLDHPNIMKLYDFFE---DKRNYY-LVMECYKGGELFDEIIHRMKFNEVDAAVII 142
Query: 704 SQ 705
Q
Sbjct: 143 KQ 144
Score = 54.7 bits (132), Expect = 1e-07
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 45 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
G + ++ +++ Y +LG G G V ++ + A K+
Sbjct: 24 PGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKI 69
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 151 bits (382), Expect = 1e-38
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-------------MTGKG 220
V+ + I ++Y +LG G G V E++ A KV
Sbjct: 27 VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86
Query: 221 NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEY 280
++ NE+ ++ L H N+++L D +E K F +++E GGEL + + + E
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC 146
Query: 281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRITSFGKLN 339
D A+ ++Q+LSG+ Y+H+ +I H + P ++L+ + ++ + DFGLS + KL
Sbjct: 147 DAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Score = 90.1 bits (224), Expect = 1e-18
Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
A + +L G+ YLH + H +I+P+N+++ + S + +K++D G + +K L
Sbjct: 149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
+ T + APEVL ++ + DVWS GV+ Y+LL G PF GQ++ + + V +Y
Sbjct: 209 LGTAY--YIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265
Query: 1068 FEYL-FKELTQEATRFL--ML 1085
F++ +K ++ EA + ML
Sbjct: 266 FDFNDWKNISDEAKELIKLML 286
Score = 80.9 bits (200), Expect = 1e-15
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
APEVL ++ + DVWS GV+ Y+LL G PF GQ++ + + V +Y F++ +K +
Sbjct: 216 APEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNI 274
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV----PSEYMIKKRERAVFLGNRLKEFS 1257
+ EA + L+ KR T EE +RW+ +K + +++F
Sbjct: 275 SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGAL--SNMRKFE 331
Score = 68.2 bits (167), Expect = 1e-11
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
GGEL + + + E D A+ ++Q+LSG+ Y+H+ +I H + P ++L+ + ++
Sbjct: 130 GGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK 189
Query: 523 LTDFGLSRRITSFGKLN 539
+ DFGLS + KL
Sbjct: 190 IVDFGLSSFFSKDYKLR 206
Score = 62.8 bits (153), Expect = 4e-10
Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 19/130 (14%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK--------------LFEYSHD 635
+ Y + ++ G + V+ EK + A K +
Sbjct: 30 KEGKIGESYFKVRKLGSGAYGEVLLCKEKN-GHSEKAIKVIKKSQFDKGRYSDDNKNIEK 88
Query: 636 TLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYT 695
++ E L+SL H I L + ++ LV E +G ++ + +RH++
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFE---DKKYFY-LVTEFYEGGELFEQIINRHKFD 144
Query: 696 EQNVATIISQ 705
E + A I+ Q
Sbjct: 145 ECDAANIMKQ 154
Score = 55.1 bits (133), Expect = 1e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 49 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
V+ + I ++Y +LG G G V E++ A KV
Sbjct: 27 VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKV 68
Score = 29.7 bits (67), Expect = 7.9
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 16/60 (26%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRN 378
+ +L D+ ++R T +AL W+ + K AL N
Sbjct: 283 KLMLTYDY--NKRCT--------------AEEALNSRWIKKYANNINKSDQKTLCGALSN 326
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 146 bits (370), Expect = 2e-38
Identities = 37/171 (21%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNE 230
+Q+ + TD Y+ +++G G + + +++ +A K++ ++ K E
Sbjct: 10 VQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII----DKSKRDPTEE 65
Query: 231 LDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQL 289
++I+ + H N++ L D Y+ +++EL GGELL + RQ +++E + + + +
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI 125
Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRITSFGKL 338
++Y+H + H L P ++L G + + DFG ++++ + L
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176
Score = 78.1 bits (193), Expect = 2e-15
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGCTQRVTKLGTLIH 1006
+ + ++ ++YLH +G+ H +++P N++ +++ D G +++ L+
Sbjct: 119 SAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 1007 -PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ---SEPETRQNVN 1062
P T N F APEVL + D+WS GVL Y +L+G +PF + E +
Sbjct: 179 TPCYTAN--FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG 236
Query: 1063 FVRYRFE 1069
++
Sbjct: 237 SGKFSLS 243
Score = 68.9 bits (169), Expect = 2e-12
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHL 521
GGELL + RQ +++E + + + + ++Y+H + H L P ++L G +
Sbjct: 100 GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESI 159
Query: 522 LLTDFGLSRRITSFGKL 538
+ DFG ++++ + L
Sbjct: 160 RICDFGFAKQLRAENGL 176
Score = 62.7 bits (153), Expect = 2e-10
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 10/130 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ---SEPETRQNVNFVRYRF--EYL 1198
APEVL + D+WS GVL Y +L+G +PF + E + ++ Y
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY- 246
Query: 1199 FKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEF 1256
+ ++ A + ML P +R T + W+V + + + + + +K
Sbjct: 247 WNSVSDTAKDLVSKML--HVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGA 304
Query: 1257 SDEYHDLKNK 1266
+ N+
Sbjct: 305 MAATYSALNR 314
Score = 55.4 bits (134), Expect = 6e-08
Identities = 8/46 (17%), Positives = 23/46 (50%)
Query: 46 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+Q+ + TD Y+ +++G G + + +++ +A K++
Sbjct: 10 VQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII 55
Score = 51.9 bits (125), Expect = 6e-07
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNL-R 648
++ TD Y+ +I G +SV + KA T A K+ + + E + L R
Sbjct: 16 NSIQFTDGYEVKEDIGVGSYSVCKRCIHKA-TNMEFAVKIID---KSKRDPTEEIEILLR 71
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+H I +L + Y + +V E ++G ++L + + ++E+ + ++
Sbjct: 72 YGQHPNIITLKDVYD---DGKYV-YVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 145 bits (368), Expect = 2e-38
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 175 KTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI 233
+ + D Y ++ LG G V + + + YA K++ + +S E+++
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEM 63
Query: 234 MNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
+ Q HRN++ L + +E +D F ++ E GG +L + ++ ++ E + + ++ + S
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
LD++H IAH L P ++L HP + + DF L I G +P+
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Score = 78.5 bits (194), Expect = 1e-15
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
+ V V L +LH +G+ H +++P+N++ V VK+ D KL P
Sbjct: 114 SVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG-SGIKLNGDCSP 172
Query: 1008 INTPN-------PEFAAPEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPFRGQSEP 1055
I+TP E+ APEV+ D+WS GV+ Y+LLSG PF G+
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232
Query: 1056 E 1056
+
Sbjct: 233 D 233
Score = 70.4 bits (173), Expect = 6e-13
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
GG +L + ++ ++ E + + ++ + S LD++H IAH L P ++L HP +
Sbjct: 95 GGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVK 154
Query: 523 LTDFGLSRRITSFGKLNPLE 542
+ DF L I G +P+
Sbjct: 155 ICDFDLGSGIKLNGDCSPIS 174
Score = 51.9 bits (125), Expect = 6e-07
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 25/113 (22%)
Query: 1144 APEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-- 1196
APEV+ D+WS GV+ Y+LLSG PF G+ + + +
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248
Query: 1197 ---------YLF-----KELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
Y F ++ A + +L R +R + + ++ W+
Sbjct: 249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLL--VRDAKQRLSAAQVLQHPWV 299
Score = 47.7 bits (114), Expect = 1e-05
Identities = 11/63 (17%), Positives = 19/63 (30%), Gaps = 7/63 (11%)
Query: 50 KTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDN 108
+ + D Y ++ LG G V + + + YA K+ I
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKI------IEKQPGHIRSRV 57
Query: 109 ENE 111
E
Sbjct: 58 FRE 60
Score = 47.3 bits (113), Expect = 2e-05
Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 595 TDKYQFISE-IHRGKFSVVVKAAEKANTENLVAAKLFE-YSHDTLHQVNTEFDNLRSLR- 651
D YQ + + G + V T A K+ E +V E + L +
Sbjct: 11 EDVYQLQEDVLGEGAHARVQTCINLI-TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
H + L+E ++ LV EK++G +LS++ R + E + ++
Sbjct: 70 HRNVLELIEFFE---EEDRFY-LVFEKMRGGSILSHIHKRRHFNELEASVVVQD 119
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 143 bits (363), Expect = 7e-38
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---------TGKGNQYKS 225
T + Y+ + LGRGV+ +V + + + + YA K++ + + +
Sbjct: 9 SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 226 LFKNELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH 284
E+DI+ ++ H N+++L D+YET F ++ +L GEL LT + +E +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+R LL + +H+L+I H L P ++L+ ++ LTDFG S ++
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQL 174
Score = 81.9 bits (203), Expect = 6e-17
Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 24/134 (17%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
+ ++L+ + LH + H +++P+N+++ + +KL D G + ++
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKLREVC 184
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQSEP 1055
GT P + APE++ D+WS GV+ Y LL+G+ PF + +
Sbjct: 185 GT---------PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM 235
Query: 1056 ETRQNVNFVRYRFE 1069
+ + Y+F
Sbjct: 236 LMLRMIMSGNYQFG 249
Score = 66.1 bits (162), Expect = 1e-11
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 1144 APEVLAEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-- 1195
APE++ D+WS GV+ Y LL+G+ PF + + + + Y+F
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 1196 EYLFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
+ + + + L+ P KR T EE + +
Sbjct: 251 PE-WDDYSDTVKDLVSRFLV--VQPQKRYTAEEALAHPFF 287
Score = 65.7 bits (161), Expect = 2e-11
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GEL LT + +E + +R LL + +H+L+I H L P ++L+ ++
Sbjct: 107 KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIK 164
Query: 523 LTDFGLSRRI 532
LTDFG S ++
Sbjct: 165 LTDFGFSCQL 174
Score = 54.2 bits (131), Expect = 1e-07
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 50 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNE 109
T + Y+ + LGRGV+ +V + + + + YA K++ V++
Sbjct: 9 SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIID-VTGGGSFSAEEVQELR 67
Query: 110 NE 111
Sbjct: 68 EA 69
Score = 52.3 bits (126), Expect = 4e-07
Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 16/131 (12%)
Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF----------EYSHD 635
P ST + Y+ + RG SVV + K T A K+ E +
Sbjct: 7 PGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKP-TCKEYAVKIIDVTGGGSFSAEEVQE 65
Query: 636 TLHQVNTEFDNLRSL-RHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEY 694
E D LR + H I L + Y+ T + LV + ++ ++ YL+ +
Sbjct: 66 LREATLKEVDILRKVSGHPNIIQLKDTYE---TNTFF-FLVFDLMKKGELFDYLTEKVTL 121
Query: 695 TEQNVATIISQ 705
+E+ I+
Sbjct: 122 SEKETRKIMRA 132
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 144 bits (366), Expect = 3e-37
Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 10/212 (4%)
Query: 137 GDELGRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVT 196
+ +G+G ++++ + + + N+ K + D Y LG G
Sbjct: 89 TELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGAC 148
Query: 197 GIVYHAVERSSGRNYAAKV--------MTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
G V A ER + + A ++ + + + E++I+ +L H ++++ +
Sbjct: 149 GEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 208
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
++ +D + I+ EL GGEL + E Y Q+L + Y+H I H L P
Sbjct: 209 FDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 267
Query: 309 GDLLVAHPG-GRHLLLTDFGLSRRITSFGKLN 339
++L++ + +TDFG S+ + +
Sbjct: 268 ENVLLSSQEEDCLIKITDFGHSKILGETSLMR 299
Score = 77.0 bits (190), Expect = 1e-14
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV-------TK 1000
+L +QYLH G+ H +++P+NV+++S +K+ D G ++ + T
Sbjct: 242 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
GT P + APEVL D WS GV+ ++ LSG PF +
Sbjct: 302 CGT---------PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 352
Score = 68.2 bits (167), Expect = 8e-12
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHL 521
GGEL + E Y Q+L + Y+H I H L P ++L++ +
Sbjct: 222 EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 281
Query: 522 LLTDFGLSRRITSFGKLN 539
+TDFG S+ + +
Sbjct: 282 KITDFGHSKILGETSLMR 299
Score = 62.4 bits (152), Expect = 4e-10
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 1144 APEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPET-RQNVNFVRYRFEYLF 1199
APEVL D WS GV+ ++ LSG PF + + + +Y F
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368
Query: 1200 -KELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
E++++A + +L+ P R T EE + WL
Sbjct: 369 WAEVSEKALDLVKKLLV--VDPKARFTTEEALRHPWL 403
Score = 58.6 bits (142), Expect = 8e-09
Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 15/135 (11%)
Query: 580 YSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE-------- 631
+ + + D+Y + G V A E+ T VA ++
Sbjct: 119 FDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIRIISKRKFAIGS 177
Query: 632 -YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSS 690
D V TE + L+ L H I + + +V+E ++G ++ +
Sbjct: 178 AREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVVG 232
Query: 691 RHEYTEQNVATIISQ 705
E Q
Sbjct: 233 NKRLKEATCKLYFYQ 247
Score = 50.1 bits (120), Expect = 3e-06
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
K + D Y LG G G V A ER + + A ++
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRI 167
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 142 bits (359), Expect = 4e-37
Identities = 38/167 (22%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 177 RTKPITDAYDFG---DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI 233
+ P YD LG G I V + S + +A K+++ + ++ + E+
Sbjct: 2 KDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITA 58
Query: 234 MNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
+ H N+V+LH+ + + ++ EL GGEL + ++ +++E + ++ +R+L+S
Sbjct: 59 LKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA 118
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRITSFGKL 338
+ +MH + + H L P +LL + + DFG +R +
Sbjct: 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165
Score = 80.8 bits (200), Expect = 3e-16
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
+Y + ++ + ++H G+ H +++P+N++ ++K+ID G + P
Sbjct: 109 SYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---QP 165
Query: 1008 INTP--NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
+ TP +AAPE+L + D+WS GV+ Y +LSG PF+
Sbjct: 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR 214
Score = 71.9 bits (177), Expect = 2e-13
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
GGEL + ++ +++E + ++ +R+L+S + +MH + + H L P +LL +
Sbjct: 90 GGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIK 149
Query: 523 LTDFGLSRRITSFGKL 538
+ DFG +R +
Sbjct: 150 IIDFGFARLKPPDNQP 165
Score = 60.0 bits (146), Expect = 1e-09
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV-------RYRF- 1195
APE+L + D+WS GV+ Y +LSG PF+ T + + + F
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE 236
Query: 1196 -EYLFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
E +K ++QEA + +L P KR + N WL
Sbjct: 237 GEA-WKNVSQEAKDLIQGLL--TVDPNKRLKMSGLRYNEWL 274
Score = 50.8 bits (122), Expect = 1e-06
Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 11/119 (9%)
Query: 591 TEPPTDKYQFIS---EIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNL 647
P Y + G FS+ K K + A K+ E L
Sbjct: 3 DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKK-SNQAFAVKIISKRM--EANTQKEITAL 59
Query: 648 RSLR-HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ H I L E + + LVME L G ++ + + ++E + I+ +
Sbjct: 60 KLCEGHPNIVKLHEVFH---DQLHT-FLVMELLNGGELFERIKKKKHFSETEASYIMRK 114
Score = 47.7 bits (114), Expect = 2e-05
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 52 RTKPITDAYDFG---DELGRGVTGIVYHAVERSSGRNYAAKV 90
+ P YD LG G I V + S + +A K+
Sbjct: 2 KDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKI 43
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 141 bits (357), Expect = 7e-37
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV--------MTGKGNQYKSLFKNE 230
K + D Y LG G G V A ER + + A K+ + + + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
++I+ +L H ++++ + ++ +D + I+ EL GGEL + E Y Q+L
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRIT 333
+ Y+H I H L P ++L++ L+ +TDFG S+ +
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Score = 75.4 bits (186), Expect = 1e-14
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV-------TK 1000
+L +QYLH G+ H +++P+NV+++S +K+ D G ++ + T
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
GT P + APEVL D WS GV+ ++ LSG PF +
Sbjct: 177 CGT---------PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 227
Score = 66.9 bits (164), Expect = 9e-12
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + E Y Q+L + Y+H I H L P ++L++ L+
Sbjct: 97 EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 156
Query: 523 -LTDFGLSRRIT 533
+TDFG S+ +
Sbjct: 157 KITDFGHSKILG 168
Score = 62.3 bits (152), Expect = 3e-10
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 1144 APEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPET-RQNVNFVRYRF--EY 1197
APEVL D WS GV+ ++ LSG PF + + + +Y F E
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 1198 LFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
+ E++++A + +L+ P R T EE + WL
Sbjct: 244 -WAEVSEKALDLVKKLLV--VDPKARFTTEEALRHPWL 278
Score = 56.9 bits (138), Expect = 1e-08
Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 15/120 (12%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---------EYSHDTLHQVNTEFD 645
D+Y + G V A E+ T VA K+ D V TE +
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 646 NLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
L+ L H I + + A + +V+E ++G ++ + E Q
Sbjct: 68 ILKKLNHPCIIKIKNFFD----AEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Score = 49.2 bits (118), Expect = 4e-06
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNEN 110
K + D Y LG G G V A ER + + A K+++ K + + N
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALN 61
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 141 bits (356), Expect = 3e-36
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--------TGKGNQYKSL 226
K YD D +GRGV+ +V V R++G +A K+M + + +
Sbjct: 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 227 FKNELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY 285
+ E I+ Q+ H +++ L DSYE+ ++ +L GEL LT + +E +
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSI 205
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+R LL + ++H +I H L P ++L+ + L+DFG S +
Sbjct: 206 MRSLLEAVSFLHANNIVHRDLKPENILLD--DNMQIRLSDFGFSCHL 250
Score = 78.2 bits (193), Expect = 3e-15
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
+ S+L+ + +LH + H +++P+N+++ ++Q++L D G + +
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLDD--NMQIRLSDFGFSCHLEPGEKLRELC 260
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQSEP 1055
GT P + APE+L D+W+ GV+ + LL+G+ PF + +
Sbjct: 261 GT---------PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI 311
Query: 1056 ETRQNVNFVRYRFE 1069
+ + +Y+F
Sbjct: 312 LMLRMIMEGQYQFS 325
Score = 64.7 bits (158), Expect = 6e-11
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GEL LT + +E + +R LL + ++H +I H L P ++L+ +
Sbjct: 183 RKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD--DNMQIR 240
Query: 523 LTDFGLSRRI 532
L+DFG S +
Sbjct: 241 LSDFGFSCHL 250
Score = 62.0 bits (151), Expect = 5e-10
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 1144 APEVLAEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-- 1195
APE+L D+W+ GV+ + LL+G+ PF + + + + +Y+F
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS 326
Query: 1196 EYLFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
+ + + + +L P R T E+ ++ +
Sbjct: 327 PE-WDDRSSTVKDLISRLLQ--VDPEARLTAEQALQHPFF 363
Score = 53.2 bits (128), Expect = 3e-07
Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 554 PAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPP-TDKYQFISEIHRGKFSVV 612
A +A P ++ + ED +W+ KY I RG SVV
Sbjct: 51 SANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVV 110
Query: 613 VKAAEKANTENLVAAKLF---------EYSHDTLHQVNTEFDNLRSLR-HERIASLLEAY 662
+ +A T + A K+ E + E LR + H I +L+++Y
Sbjct: 111 RRCVHRA-TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169
Query: 663 KPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ ++S + LV + ++ ++ YL+ + +E+ +I+
Sbjct: 170 E---SSSFM-FLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Score = 52.4 bits (126), Expect = 6e-07
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 50 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGTISHSVTVHVED 107
K YD D +GRGV+ +V V R++G +A K+M T + + E
Sbjct: 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 108 NENE 111
E
Sbjct: 146 TRRE 149
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 139 bits (352), Expect = 4e-36
Identities = 43/205 (20%), Positives = 72/205 (35%), Gaps = 45/205 (21%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKN 229
+ Y +G+G G+V A+E + A K+ + + K
Sbjct: 18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77
Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLH-------------------- 269
E+ +M +L H N+ RL++ YE + ++ EL GG LL
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 270 --------------------SLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
+ E I++ +RQ+ S L Y+H I H + P
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 310 DLLVAHPGGRHLLLTDFGLSRRITS 334
+ L + + L DFGLS+
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYK 222
Score = 100 bits (250), Expect = 1e-22
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 23/175 (13%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+ + + L YLH +G+CH +I+P+N + ++ +S ++KL+D G ++ KL +
Sbjct: 171 SNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYG 230
Query: 1009 NTPN---PEFAAPEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063
T P F APEVL E P+ D WSAGVL ++LL GA PF G ++ +T V
Sbjct: 231 MTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN 290
Query: 1064 VRYRFEY-LFKELTQEATRFL--ML------------IFKHEVDWIT-LANNIDH 1102
+ FE + L+ A L +L +H WI+ ++ I
Sbjct: 291 KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHP--WISQFSDKIYK 343
Score = 77.6 bits (191), Expect = 4e-15
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 1144 APEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFK 1200
APEVL E P+ D WSAGVL ++LL GA PF G ++ +T V + FE +
Sbjct: 242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYN 301
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
L+ A L + R +R ++ W+
Sbjct: 302 VLSPLARDLLSNLLNRNVDERFDAMRALQHPWI 334
Score = 67.2 bits (164), Expect = 8e-12
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 459 PNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
G + E I++ +RQ+ S L Y+H I H + P + L +
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 519 RHLLLTDFGLSRRITS 534
+ L DFGLS+
Sbjct: 207 FEIKLVDFGLSKEFYK 222
Score = 66.8 bits (163), Expect = 1e-11
Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 11/151 (7%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK------LFEYSHDTLHQVNTEFDNLR 648
KY I +G + VV A E T + A K + + + + ++ TE ++
Sbjct: 25 QKKYHLKGAIGQGSYGVVRVAIENQ-TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
L H IA L E Y+ I LVME G +L L+ + + A + +
Sbjct: 84 KLHHPNIARLYEVYE---DEQYI-CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQI 139
Query: 709 HYLKKNREQIADTADKSRIPRTIREYREQSA 739
+ E+ + + RE+
Sbjct: 140 CPCPECNEEAINGSIHGFRESLDFVQREKLI 170
Score = 56.0 bits (135), Expect = 3e-08
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 50 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNE 109
+ Y +G+G G+V A+E + A K+M K I VE +
Sbjct: 18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN-KNKIRQINPKDVERIK 76
Query: 110 NE 111
E
Sbjct: 77 TE 78
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 133 bits (337), Expect = 4e-34
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
+ + + +TD Y + LG GV G V R +G+ A K++ +
Sbjct: 16 FQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY-D----SPKARQ 70
Query: 230 ELDIMNQLC-HRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDI 282
E+D Q ++V + D YE K II E GGEL + + +TE +
Sbjct: 71 EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREA 130
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRIT 333
A +R + + + ++H +IAH + P +LL L LTDFG ++ T
Sbjct: 131 AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182
Score = 82.8 bits (205), Expect = 6e-17
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
A + + +Q+LH + H +++P+N++ S +KL D G + T L P
Sbjct: 131 AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA-KETTQNALQTP 189
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
TP + APEVL E D+WS GV+ Y+LL G PF + +
Sbjct: 190 CYTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM 241
Score = 65.4 bits (160), Expect = 3e-11
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-H 520
GGEL + + +TE + A +R + + + ++H +IAH + P +LL
Sbjct: 110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV 169
Query: 521 LLLTDFGLSRRIT 533
L LTDFG ++ T
Sbjct: 170 LKLTDFGFAKETT 182
Score = 61.6 bits (150), Expect = 5e-10
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE----PETRQNVNFVRYRF--EY 1197
APEVL E D+WS GV+ Y+LL G PF + P ++ + +Y F
Sbjct: 197 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256
Query: 1198 LFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ E++++A + + L+ K P +R T+ + + W+
Sbjct: 257 -WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
Score = 55.8 bits (135), Expect = 3e-08
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 581 SVEDSPIEWSTEPPTDKYQFISE-IHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQ 639
V E TD YQ + + G V++ + T A KL S +
Sbjct: 13 EVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRR-TGQKCALKLLYDSPKARQE 71
Query: 640 VNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR--HEYTEQ 697
V+ ++ I +L+ Y+ +++ME ++G ++ S + R +TE+
Sbjct: 72 VDHH---WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTER 128
Query: 698 NVATIISQ 705
A I+
Sbjct: 129 EAAEIMRD 136
Score = 51.2 bits (123), Expect = 1e-06
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 46 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKV 90
+ + + +TD Y + LG GV G V R +G+ A K+
Sbjct: 16 FQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKL 61
Score = 29.6 bits (67), Expect = 7.6
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 18/67 (26%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRN 378
R LL TD + R+T + Q + HPW+N + P TP L+
Sbjct: 269 RLLLKTD--PTERLT--------------ITQFMNHPWINQSMVVP--QTPLHTARVLQE 310
Query: 379 YYNLYKD 385
+ + +
Sbjct: 311 DKDHWDE 317
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 129 bits (326), Expect = 8e-33
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 8/167 (4%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCH 239
+ D LG+G T V+ + +G +A KV + + E +++ +L H
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 240 RNLVRLHDSYE--TKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLD 294
+N+V+L E T +I E G L L + E + +R ++ G++
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRITSFGKLN 339
++ I H + PG+++ + LTDFG +R + +
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
Score = 77.9 bits (192), Expect = 2e-15
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 26/124 (20%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGC-------TQRVTKLGTLI 1005
V+ G+ +L G+ H NI+P N++ KL D G Q V+ GT
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT-- 178
Query: 1006 HPINTPNPEFAAPEVLAEEPIF--------PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
E+ P++ + D+WS GV Y +G+ PFR P
Sbjct: 179 -------EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231
Query: 1058 RQNV 1061
+ V
Sbjct: 232 NKEV 235
Score = 65.2 bits (159), Expect = 3e-11
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 463 PGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
P G L L + E + +R ++ G++++ I H + PG+++
Sbjct: 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDG 151
Query: 520 HLL--LTDFGLSRRITSFGKLN 539
+ LTDFG +R + +
Sbjct: 152 QSVYKLTDFGAARELEDDEQFV 173
Score = 62.1 bits (151), Expect = 3e-10
Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 10/127 (7%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH--DTLHQVNTEFDNLRSLRHE 653
+ + +G + V + K T +L A K+F + EF+ L+ L H+
Sbjct: 9 HLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHK 67
Query: 654 RIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR---HEYTEQNVATIISQAWE-- 708
I L + TT + VL+ME + + L + E ++
Sbjct: 68 NIVKLFAIEE-ETTTRHK-VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 709 HYLKKNR 715
++L++N
Sbjct: 126 NHLRENG 132
Score = 57.1 bits (138), Expect = 1e-08
Identities = 19/125 (15%), Positives = 32/125 (25%), Gaps = 34/125 (27%)
Query: 1144 APEVLAEEPIF--------PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV------- 1188
P++ + D+WS GV Y +G+ PFR P + V
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242
Query: 1189 -------------------NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
+ L + L T L I + K ++
Sbjct: 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302
Query: 1230 NRWLV 1234
+
Sbjct: 303 ETSDI 307
Score = 44.0 bits (104), Expect = 2e-04
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ D LG+G T V+ + +G +A KV
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVF 42
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 124 bits (313), Expect = 3e-31
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 174 VKTRTKPITDAYD-FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD 232
++ + I D Y LG G+ G V + + +A K++ Q + E++
Sbjct: 8 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVE 62
Query: 233 IMNQLC-HRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHY 285
+ + ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 63 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 122
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGL 328
++ + + Y+H ++IAH + P +LL +L LTDFG
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166
Score = 65.0 bits (159), Expect = 3e-11
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 24/114 (21%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHP 1007
+ + S+ + +QYLH + H +++P+N++ S R + +KL D G
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF------------- 166
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
A E E D+WS GV+ Y+LL G PF +
Sbjct: 167 ---------AKETTGE-KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 210
Score = 60.0 bits (146), Expect = 1e-09
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
Query: 522 L-LTDFGL 528
L LTDFG
Sbjct: 159 LKLTDFGF 166
Score = 56.9 bits (138), Expect = 1e-08
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLF--- 1199
A E E D+WS GV+ Y+LL G PF + R R +Y F
Sbjct: 167 AKETTGE-KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM-KTRIRMGQYEFPNP 224
Query: 1200 --KELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
E+++E + +L K P +R T+ E + W+
Sbjct: 225 EWSEVSEEVKMLIRNLL--KTEPTQRMTITEFMNHPWI 260
Score = 53.5 bits (129), Expect = 2e-07
Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Query: 584 DSPIEWSTEPPTDKYQFISE-IHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT 642
S ++ D Y+ S+ + G V++ K T+ A K+ + +V
Sbjct: 5 KSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKR-TQEKFALKMLQDCPKARREVEL 63
Query: 643 EFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR--HEYTEQNVA 700
R+ + I +++ Y+ ++VME L G ++ S + R +TE+ +
Sbjct: 64 H---WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 701 TIISQ 705
I+
Sbjct: 121 EIMKS 125
Score = 46.9 bits (112), Expect = 3e-05
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 49 VKTRTKPITDAYD-FGDELGRGVTGIVYHAVERSSGRNYAAKV 90
++ + I D Y LG G+ G V + + +A K+
Sbjct: 8 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM 50
Score = 29.2 bits (66), Expect = 8.2
Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 18/67 (26%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRN 378
R+LL T+ ++R+T + + + HPW+ + + P TP + L+
Sbjct: 238 RNLLKTEP--TQRMT--------------ITEFMNHPWIMQSTKVP--QTPLHTSRVLKE 279
Query: 379 YYNLYKD 385
++D
Sbjct: 280 DKERWED 286
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 126 bits (318), Expect = 3e-31
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 8/167 (4%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCH 239
+ D LG+G T V+ + +G +A KV + + E +++ +L H
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 240 RNLVRLHDSYE--TKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLD 294
+N+V+L E T +I E G L L + E + +R ++ G++
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRITSFGKLN 339
++ I H + PG+++ + LTDFG +R + +
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
Score = 76.4 bits (188), Expect = 1e-14
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 26/124 (20%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGC-------TQRVTKLGTLI 1005
V+ G+ +L G+ H NI+P N++ KL D G Q V+ GT
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT-- 178
Query: 1006 HPINTPNPEFAAPEVLAEEPIF--------PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
E+ P++ + D+WS GV Y +G+ PFR P
Sbjct: 179 -------EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231
Query: 1058 RQNV 1061
+ V
Sbjct: 232 NKEV 235
Score = 63.3 bits (154), Expect = 2e-10
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 463 PGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
P G L L + E + +R ++ G++++ I H + PG+++
Sbjct: 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDG 151
Query: 520 HLL--LTDFGLSRRITSFGKLN 539
+ LTDFG +R + +
Sbjct: 152 QSVYKLTDFGAARELEDDEQFV 173
Score = 60.6 bits (147), Expect = 1e-09
Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 10/127 (7%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH--DTLHQVNTEFDNLRSLRHE 653
+ + +G + V + K T +L A K+F + EF+ L+ L H+
Sbjct: 9 HLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHK 67
Query: 654 RIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR---HEYTEQNVATIISQAWE-- 708
I L + +T + VL+ME + + L + E ++
Sbjct: 68 NIVKLFAIEEETT--TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 709 HYLKKNR 715
++L++N
Sbjct: 126 NHLRENG 132
Score = 58.7 bits (142), Expect = 5e-09
Identities = 25/180 (13%), Positives = 47/180 (26%), Gaps = 46/180 (25%)
Query: 1144 APEVLAEEPIF--------PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV------- 1188
P++ + D+WS GV Y +G+ PFR P + V
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242
Query: 1189 ------------NFVRYRFEY-------LFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
+ L + L T L I + K ++
Sbjct: 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302
Query: 1230 NRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEE 1289
+ +I VF ++ H ++ + H+ + + I
Sbjct: 303 ETSDILHRMVIH-----VFSLQQMTAHKIYIHS-------YNTATIFHELVYKQTKIISS 350
Score = 43.3 bits (102), Expect = 4e-04
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ D LG+G T V+ + +G +A KV
Sbjct: 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVF 42
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 126 bits (318), Expect = 4e-31
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 14/175 (8%)
Query: 174 VKTRTKPITDAYD-FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD 232
++ + I D Y LG G+ G V + + +A K++ Q + E++
Sbjct: 52 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVE 106
Query: 233 IMNQLC-HRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHY 285
+ + ++VR+ D YE + I+ E GGEL + + +TE + +
Sbjct: 107 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 166
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLN 339
++ + + Y+H ++IAH + P +LL +L LTDFG ++ TS L
Sbjct: 167 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Score = 83.2 bits (206), Expect = 8e-17
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
+ + S+ + +QYLH + H +++P+N++ S R +KL D G + T +L P
Sbjct: 164 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 223
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
TP + APEVL E D+WS GV+ Y+LL G PF +
Sbjct: 224 CYTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275
Score = 65.1 bits (159), Expect = 5e-11
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL + + +TE + + ++ + + Y+H ++IAH + P +LL +
Sbjct: 143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 202
Query: 522 L-LTDFGLSRRITSFGKLN 539
L LTDFG ++ TS L
Sbjct: 203 LKLTDFGFAKETTSHNSLT 221
Score = 60.9 bits (148), Expect = 1e-09
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLF--- 1199
APEVL E D+WS GV+ Y+LL G PF + R R +Y F
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM-KTRIRMGQYEFPNP 289
Query: 1200 --KELTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKE 1255
E+++E + +L K P +R T+ E + W++ S K + + LKE
Sbjct: 290 EWSEVSEEVKMLIRNLL--KTEPTQRMTITEFMNHPWIMQST---KVPQTPLHTSRVLKE 344
Query: 1256 FSDEYHDLKNK 1266
+ + D+K +
Sbjct: 345 DKERWEDVKEE 355
Score = 52.0 bits (125), Expect = 8e-07
Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 10/152 (6%)
Query: 557 KHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISE-IHRGKFSVVVKA 615
A P Q P + S ++ D Y+ S+ + G V++
Sbjct: 25 TPALPHPPAQPPPPPPQQFPQFHV---KSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQI 81
Query: 616 AEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLV 675
K T+ A K+ + +V R+ + I +++ Y+ ++V
Sbjct: 82 FNKR-TQEKFALKMLQDCPKARREVELH---WRASQCPHIVRIVDVYENLYAGRKCLLIV 137
Query: 676 MEKLQGADVLSYLSSR--HEYTEQNVATIISQ 705
ME L G ++ S + R +TE+ + I+
Sbjct: 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKS 169
Score = 45.9 bits (109), Expect = 7e-05
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 49 VKTRTKPITDAYD-FGDELGRGVTGIVYHAVERSSGRNYAAKV 90
++ + I D Y LG G+ G V + + +A K+
Sbjct: 52 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM 94
Score = 29.3 bits (66), Expect = 8.2
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 18/75 (24%)
Query: 319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRN 378
R+LL T+ ++R+T + + + HPW+ + + P TP + L+
Sbjct: 303 RNLLKTEP--TQRMT--------------ITEFMNHPWIMQSTKVP--QTPLHTSRVLKE 344
Query: 379 YYNLYKDWYGNAAVR 393
++D
Sbjct: 345 DKERWEDVKEEMTSA 359
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 120 bits (303), Expect = 1e-29
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
Y G LG+G + + + +A K++ K +Q + + E+ I L H+
Sbjct: 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ 101
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
++V H +E D ++ EL LL R+ TE + +Y+RQ++ G Y+HR
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 161
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
+ H L G+L + + + DFGL+ ++ G+
Sbjct: 162 VIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGER 197
Score = 79.3 bits (196), Expect = 1e-15
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI-NTPNP 1013
++ G QYLH + H +++ N+ + ++VK+ D G +V G + TPN
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKVLCGTPN- 206
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
+ APEVL+++ + DVWS G + Y LL G PF ET + Y K
Sbjct: 207 -YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---K 262
Query: 1074 ELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
+ A + ML T+ ++ EF
Sbjct: 263 HINPVAASLIQKMLQ-TDPTARPTINELLNDEF 294
Score = 71.2 bits (175), Expect = 4e-13
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL+++ + DVWS G + Y LL G PF ET + Y K +
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 265
Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRW 1232
A + + + P RPT+ E + +
Sbjct: 266 PVAASLIQKMLQTDPTARPTINELLNDEF 294
Score = 65.0 bits (159), Expect = 4e-11
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
LL R+ TE + +Y+RQ++ G Y+HR + H L G+L + +
Sbjct: 124 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL--EVK 181
Query: 523 LTDFGLSRRITSFGKL 538
+ DFGL+ ++ G+
Sbjct: 182 IGDFGLATKVEYDGER 197
Score = 48.5 bits (116), Expect = 9e-06
Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 10/148 (6%)
Query: 563 TEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPT-DKYQFISEIHRGKFSVVVKAAEKANT 621
P +A P E +P + +Y + +G F+ A+T
Sbjct: 7 PGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKC-FEISDADT 65
Query: 622 ENLVAAKLFE----YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVME 677
+ + A K+ +++ E RSL H+ + ++ + +V+E
Sbjct: 66 KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE---DNDFV-FVVLE 121
Query: 678 KLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ +L R TE + Q
Sbjct: 122 LCRRRSLLELHKRRKALTEPEARYYLRQ 149
Score = 36.9 bits (86), Expect = 0.033
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
Y G LG+G + + + +A K++
Sbjct: 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIV 74
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 118 bits (299), Expect = 2e-29
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
Y G LG+G + + + +A K++ K +Q + + E+ I L H+
Sbjct: 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ 75
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
++V H +E D ++ EL LL R+ TE + +Y+RQ++ G Y+HR
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
+ H L G+L + + + DFGL+ ++ G+
Sbjct: 136 VIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGER 171
Score = 78.4 bits (194), Expect = 1e-15
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI-NTPNP 1013
++ G QYLH + H +++ N+ + ++VK+ D G +V G + TPN
Sbjct: 124 IVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKVLCGTPN- 180
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
+ APEVL+++ + DVWS G + Y LL G PF ET + Y K
Sbjct: 181 -YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---K 236
Query: 1074 ELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
+ A + ML T+ ++ EF
Sbjct: 237 HINPVAASLIQKMLQ-TDPTARPTINELLNDEF 268
Score = 70.3 bits (173), Expect = 5e-13
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL+++ + DVWS G + Y LL G PF ET + Y K +
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 239
Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRW 1232
A + + + P RPT+ E + +
Sbjct: 240 PVAASLIQKMLQTDPTARPTINELLNDEF 268
Score = 64.5 bits (158), Expect = 4e-11
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
LL R+ TE + +Y+RQ++ G Y+HR + H L G+L + +
Sbjct: 98 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL--EVK 155
Query: 523 LTDFGLSRRITSFGKL 538
+ DFGL+ ++ G+
Sbjct: 156 IGDFGLATKVEYDGER 171
Score = 44.1 bits (105), Expect = 2e-04
Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 17/128 (13%)
Query: 590 STEPPT--------DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTL 637
+ E P +Y + +G F+ A+T+ + A K+
Sbjct: 1 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKC-FEISDADTKEVFAGKIVPKSLLLKPHQR 59
Query: 638 HQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQ 697
+++ E RSL H+ + ++ + +V+E + +L R TE
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFFE---DNDFV-FVVLELCRRRSLLELHKRRKALTEP 115
Query: 698 NVATIISQ 705
+ Q
Sbjct: 116 EARYYLRQ 123
Score = 36.4 bits (85), Expect = 0.049
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
Y G LG+G + + + +A K++
Sbjct: 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIV 48
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 117 bits (295), Expect = 5e-29
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
++ G LG+G G VY A E+ S A KV+ K L + E++I + L H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHP 69
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
N++RL+ + +I E A G + L + S + E A YI +L + L Y H
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS------RRITSFGKLN 339
+ H + P +LL+ G L + DFG S RR G L+
Sbjct: 130 VIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTDLCGTLD 172
Score = 73.8 bits (182), Expect = 3e-14
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVTKLGTLIHPI 1008
+ + L Y H + + H +I+P+N+++ S + ++K+ D G ++R GT
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTDLCGT----- 170
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
++ PE++ + D+WS GVL Y L G PF + ET + ++ V + F
Sbjct: 171 ----LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Score = 66.5 bits (163), Expect = 7e-12
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
PE++ + D+WS GVL Y L G PF + ET + ++ V + F +T
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVT 231
Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRW 1232
+ A + + K P +RP + E E+ W
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPW 260
Score = 64.9 bits (159), Expect = 2e-11
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
P G + L + S + E A YI +L + L Y H + H + P +LL+ G L
Sbjct: 92 PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELK 149
Query: 523 LTDFGLS------RRITSFGKLN 539
+ DFG S RR G L+
Sbjct: 150 IADFGWSVHAPSSRRTDLCGTLD 172
Score = 41.8 bits (99), Expect = 8e-04
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTLHQVNTEFDNLRSLR 651
+ ++ + +GKF V A EK ++ ++A K+ HQ+ E + LR
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
H I L + A+ + L++E V L ++ EQ AT I++
Sbjct: 68 HPNILRLYGYFH---DATRV-YLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Score = 38.3 bits (90), Expect = 0.012
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
++ G LG+G G VY A E+ S A KV+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVL 42
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 116 bits (292), Expect = 1e-28
Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
+ G+ LG+G VY A +G A K++ K + + +NE+ I QL H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRV-QNEVKIHCQLKHP 71
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRL 299
+++ L++ +E + ++ E+ GE+ L + ++E + H++ Q+++G+ Y+H
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
I H LT +LL+ ++ + DFGL+ ++ +
Sbjct: 132 GILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEK 168
Score = 75.7 bits (187), Expect = 7e-15
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
+ + ++ G+ YLH G+ H ++ N+++ ++ +K+ D G ++ + +
Sbjct: 115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR--NMNIKIADFGLATQLKMPHEKHYTL 172
Query: 1009 -NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
TPN + +PE+ ++DVWS G + Y LL G PF + T V Y
Sbjct: 173 CGTPN--YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE 230
Query: 1068 FEYLFKELTQEATRFLMLIFKHE-VDWITLANNIDHEF 1104
L+ EA + + + D ++L++ +DH F
Sbjct: 231 MP---SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265
Score = 67.9 bits (167), Expect = 2e-12
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
+PE+ ++DVWS G + Y LL G PF + T V Y L+
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP---SFLS 236
Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
EA + + +R P R ++ ++ ++
Sbjct: 237 IEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
Score = 60.2 bits (147), Expect = 1e-09
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 463 PGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GE+ L + ++E + H++ Q+++G+ Y+H I H LT +LL+ ++
Sbjct: 94 HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM--NI 151
Query: 522 LLTDFGLSRRITSFGKL 538
+ DFGL+ ++ +
Sbjct: 152 KIADFGLATQLKMPHEK 168
Score = 39.1 bits (92), Expect = 0.006
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ G+ LG+G VY A +G A K++
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI 44
Score = 37.1 bits (87), Expect = 0.030
Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTLHQVNTEFDNLRSLR 651
+ ++ + + +G F+ V AE +T VA K+ + Y + +V E L+
Sbjct: 11 EDFKVGNLLGKGSFAGV-YRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR-HEYTEQNVATIISQ 705
H I L ++ ++ + LV+E ++ YL +R ++E + Q
Sbjct: 70 HPSILELYNYFE---DSNYV-YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 114 bits (288), Expect = 4e-28
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
+D G LG+G G VY A E+ + A KV+ K L + E++I + L H
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL-RREIEIQSHLRHP 74
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
N++R+++ + + ++ E A GEL L + + E A ++ +L L Y H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS------RRITSFGKLN 339
+ H + P +LL+ + G L + DFG S RR T G L+
Sbjct: 135 VIHRDIKPENLLMGYKG--ELKIADFGWSVHAPSLRRRTMCGTLD 177
Score = 76.1 bits (188), Expect = 5e-15
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC------TQRVTKLGTLIHPI 1008
+ D L Y H R + H +I+P+N++M ++K+ D G +R T GT
Sbjct: 123 LADALHYCHERKVIHRDIKPENLLM--GYKGELKIADFGWSVHAPSLRRRTMCGT----- 175
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
++ PE++ + + D+W AGVL Y L G PF S ET + + V +F
Sbjct: 176 ----LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 1069 EYLFKELTQEATRFLM-LIFKHEVDWITLANNIDHEFWHVKDLKR 1112
L+ + + L+ H + L ++H W + +R
Sbjct: 232 P---PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP-WVKANSRR 272
Score = 68.4 bits (168), Expect = 2e-12
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
PE++ + + D+W AGVL Y L G PF S ET + + V +F L+
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---PFLS 236
Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRW 1232
+ + + + P +R ++ E+ W
Sbjct: 237 DGSKDLISKLLRYHPPQRLPLKGVMEHPW 265
Score = 62.2 bits (152), Expect = 2e-10
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
P GEL L + + E A ++ +L L Y H + H + P +LL+ + G L
Sbjct: 97 PRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--ELK 154
Query: 523 LTDFGLS------RRITSFGKLN 539
+ DFG S RR T G L+
Sbjct: 155 IADFGWSVHAPSLRRRTMCGTLD 177
Score = 40.7 bits (96), Expect = 0.002
Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 9/114 (7%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTLHQVNTEFDNLRSLR 651
D + + +GKF V A + + ++A K+ HQ+ E + LR
Sbjct: 14 DDFDIGRPLGKGKFGNV-YLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
H I + + I L++E ++ L + EQ AT + +
Sbjct: 73 HPNILRMYNYFH---DRKRI-YLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Score = 37.6 bits (88), Expect = 0.018
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+D G LG+G G VY A E+ + A KV+
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVL 47
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 115 bits (290), Expect = 4e-28
Identities = 34/191 (17%), Positives = 74/191 (38%), Gaps = 9/191 (4%)
Query: 156 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 215
+ + + S Y ++G G + V+ + + YA K
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKY 59
Query: 216 MTGKGNQYKSL--FKNELDIMNQLCHRNL--VRLHDSYETKDSFTIISELAGGGELLHSL 271
+ + ++L ++NE+ +N+L + +RL+D T ++ E G +L L
Sbjct: 60 VNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL 118
Query: 272 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
++ ++ Y + +L + +H+ I H L P + L+ L L DFG++ +
Sbjct: 119 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQ 175
Query: 332 ITSFGKLNPLE 342
+ +
Sbjct: 176 MQPDTTSVVKD 186
Score = 69.6 bits (171), Expect = 1e-12
Identities = 30/170 (17%), Positives = 65/170 (38%), Gaps = 22/170 (12%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTP 1011
+L+ + +H G+ H +++P N ++ +KLID G ++ T + + T
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 1012 NPEFAAPEVLAEEPIFPQT-----------DVWSAGVLAYVLLSGASPFRGQSEP-ETRQ 1059
N + PE + + + DVWS G + Y + G +PF+
Sbjct: 193 N--YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 250
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEFWHVK 1108
+ + E+ ++ L K + I++ + H + ++
Sbjct: 251 AIIDPNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299
Score = 60.0 bits (146), Expect = 1e-09
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
+L L ++ ++ Y + +L + +H+ I H L P + L+ L L
Sbjct: 111 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKL 167
Query: 524 TDFGLSRRITSFGKLNPLE 542
DFG++ ++ +
Sbjct: 168 IDFGIANQMQPDTTSVVKD 186
Score = 58.5 bits (142), Expect = 5e-09
Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 13/104 (12%)
Query: 1144 APEVLAEEPIFPQT-----------DVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFV 1191
PE + + + DVWS G + Y + G +PF+ +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 255
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
+ E+ ++ L KR P +R ++ E + ++
Sbjct: 256 NHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298
Score = 53.9 bits (130), Expect = 1e-07
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 12/114 (10%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDNLRSLRH- 652
Y + +I G S V + + + A K L E + TL E L L+
Sbjct: 29 IYSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 86
Query: 653 -ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++I L + T I +VME D+ S+L + +
Sbjct: 87 SDKIIRLYDYEI---TDQYI-YMVMECGNI-DLNSWLKKKKSIDPWERKSYWKN 135
Score = 32.3 bits (74), Expect = 0.99
Identities = 8/61 (13%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 31 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
+ + + S Y ++G G + V+ + + YA K
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKY 59
Query: 91 M 91
+
Sbjct: 60 V 60
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 120 bits (303), Expect = 4e-28
Identities = 34/180 (18%), Positives = 65/180 (36%), Gaps = 11/180 (6%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKN 229
G + + ++ + LG G G V + + +G A K + + +
Sbjct: 2 GGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL 61
Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFT------IISELAGGGEL---LHSLTRQSYYTEY 280
E+ IM +L H N+V + + + E GG+L L+ E
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLN 339
I + + S L Y+H I H L P ++++ R + + D G ++ +
Sbjct: 122 PIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 181
Score = 80.5 bits (198), Expect = 2e-15
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGC-------TQRVTKLGTLIH 1006
+ L+YLH + H +++P+N+V+ + K+IDLG +GT
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT--- 186
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
++ APE+L ++ D WS G LA+ ++G PF +P +
Sbjct: 187 ------LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKS 240
Query: 1067 RFEYLFKELTQEATRFLMLI 1086
+ + A +F ++
Sbjct: 241 NEHIVVYDDLTGAVKFSSVL 260
Score = 67.4 bits (164), Expect = 2e-11
Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 31/186 (16%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY------ 1197
APE+L ++ D WS G LA+ ++G PF +P +
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL 250
Query: 1198 ---------------LFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKK 1242
L L + R+L + +R T + + ++
Sbjct: 251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310
Query: 1243 RERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQE---ELISTAFTSHL 1299
+ +V + + + +++L +L L + I E EL+ + +
Sbjct: 311 KLLSVMNMVSGRVHTYPVTE-------NENLQNLKSWLQQDTGIPEEEQELLQASGLALN 363
Query: 1300 VNKPSS 1305
+P +
Sbjct: 364 SAQPLT 369
Score = 62.8 bits (152), Expect = 5e-10
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 463 PGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
GG+L L+ E I + + S L Y+H I H L P ++++ R
Sbjct: 101 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQR 160
Query: 520 HLL-LTDFGLSRRITSFGKLN 539
+ + D G ++ +
Sbjct: 161 LIHKIIDLGYAKELDQGELCT 181
Score = 55.1 bits (132), Expect = 1e-07
Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF--EYSHDTLHQVNTEFDNLRSLRH 652
++ + G F V++ + +T VA K E S + E ++ L H
Sbjct: 13 CGPWEMKERLGTGGFGYVLRWIHQ-DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH 71
Query: 653 ERIASLLEAY--KPSTTASNIAVLVMEKLQGADVLSYLSSR---HEYTEQNVATIISQ 705
+ S E +++ +L ME +G D+ YL+ E + T++S
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Score = 41.6 bits (97), Expect = 0.002
Identities = 9/46 (19%), Positives = 17/46 (36%)
Query: 46 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
G + + ++ + LG G G V + + +G A K
Sbjct: 2 GGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC 47
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 114 bits (288), Expect = 6e-28
Identities = 36/188 (19%), Positives = 71/188 (37%), Gaps = 17/188 (9%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
++ LG+G G V A R YA K + + ++ +E+ ++ L H+
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI-LSEVMLLASLNHQ 62
Query: 241 NLVRLHDSYETKDSFT-------------IISELAGGGELLHSLTRQSYYTEYD-IAHYI 286
+VR + ++ + +F I E G L + ++ + D
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVR 346
RQ+L L Y+H I H L P ++ + ++ + DFGL++ + + L+
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 347 YVRQALRH 354
Sbjct: 181 PGSSDNLT 188
Score = 63.9 bits (156), Expect = 8e-11
Identities = 26/150 (17%), Positives = 57/150 (38%), Gaps = 19/150 (12%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG----CTQRVTKLGTLIHPINT 1010
+L+ L Y+H +G+ H +++P N+ + S VK+ D G + + L +
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDE--SRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 1011 PN---------PEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
+ + A EVL + + D++S G++ + ++ G +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKK 240
Query: 1061 VNFVRYRF-EYLFKELTQEATRFLMLIFKH 1089
+ V F + + + L+ H
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDH 270
Score = 60.4 bits (147), Expect = 1e-09
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKE 1201
A EVL + + D++S G++ + ++ G + + V F
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + + L+ P KRP + WL
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
Score = 58.9 bits (143), Expect = 3e-09
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 463 PGGELLHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
G L + ++ + D RQ+L L Y+H I H L P ++ + ++
Sbjct: 98 ENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR--NV 155
Query: 522 LLTDFGLSRRITSFGKLNPLEYGN 545
+ DFGL++ + + L+ N
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQN 179
Score = 54.6 bits (132), Expect = 8e-08
Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 11/121 (9%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHER 654
++ I+ + +G F VVKA A K ++ + L + +E L SL H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNA-LDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQY 63
Query: 655 IASLLEAYKPSTTASNIAV---------LVMEKLQGADVLSYLSSRHEYTEQN-VATIIS 704
+ A+ + ME + + + S + +++ +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 705 Q 705
Q
Sbjct: 124 Q 124
Score = 38.5 bits (90), Expect = 0.010
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
++ LG+G G V A R YA K +
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI 39
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 114 bits (287), Expect = 2e-27
Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNL 242
Y ++G G + V+ + + YA K + + ++L ++NE+ +N+L +
Sbjct: 11 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 243 --VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
+RL+D T ++ E G +L L ++ ++ Y + +L + +H+
Sbjct: 70 KIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 128
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
I H L P + L+ L L DFG++ ++
Sbjct: 129 IVHSDLKPANFLIVD---GMLKLIDFGIANQMQP 159
Score = 69.0 bits (169), Expect = 2e-12
Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 22/166 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTP 1011
+L+ + +H G+ H +++P N ++ +KLID G ++ T + + T
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 1012 NPEFAAPEVLAEEPIFPQT-----------DVWSAGVLAYVLLSGASPFRGQSEPETR-Q 1059
N + PE + + + DVWS G + Y + G +PF+ ++
Sbjct: 174 N--YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 231
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
+ + E+ ++ L K + I++ + H +
Sbjct: 232 AIIDPNHEIEF-PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276
Score = 59.7 bits (145), Expect = 2e-09
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
+L L ++ ++ Y + +L + +H+ I H L P + L+ L L
Sbjct: 92 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKL 148
Query: 524 TDFGLSRRITS 534
DFG++ ++
Sbjct: 149 IDFGIANQMQP 159
Score = 58.2 bits (141), Expect = 6e-09
Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 15/162 (9%)
Query: 1144 APEVLAEEPIFPQT-----------DVWSAGVLAYVLLSGASPFRGQSEPETR-QNVNFV 1191
PE + + + DVWS G + Y + G +PF+ ++ +
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 236
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGN 1251
+ E+ ++ L KR P +R ++ E + ++ + + + +
Sbjct: 237 NHEIEF-PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGT--TE 293
Query: 1252 RLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELIST 1293
+K + L + + +L++ + S T
Sbjct: 294 EMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKT 335
Score = 53.6 bits (129), Expect = 2e-07
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 12/114 (10%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDNLRSLRH- 652
Y + +I G S V + + + A K L E + TL E L L+
Sbjct: 10 IYSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67
Query: 653 -ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
++I L + T I +VME D+ S+L + +
Sbjct: 68 SDKIIRLYDYEI---TDQYI-YMVMECGNI-DLNSWLKKKKSIDPWERKSYWKN 116
Score = 31.2 bits (71), Expect = 2.2
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
Y ++G G + V+ + + YA K +
Sbjct: 11 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV 41
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 112 bits (283), Expect = 3e-27
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 5/181 (2%)
Query: 170 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLF 227
G ++ LG G G V+ + GR YA K +G + ++
Sbjct: 44 PGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK 103
Query: 228 KNELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
E+ ++ H VRL ++E + +EL G H + E + Y+
Sbjct: 104 LAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYL 163
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVR 346
R L L ++H + HL + P ++ + G L DFGL + + G E D R
Sbjct: 164 RDTLLALAHLHSQGLVHLDVKPANIFLGPRG--RCKLGDFGLLVELGTAGAGEVQEGDPR 221
Query: 347 Y 347
Y
Sbjct: 222 Y 222
Score = 64.6 bits (158), Expect = 4e-11
Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
L L +LH +GL HL+++P N+ + + KL D G + G P
Sbjct: 166 TLLALAHLHSQGLVHLDVKPANIFLG--PRGRCKLGDFGLLVELGTAGAGEVQEGD--PR 221
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS-PFRGQSEPETRQNVNFVRYRFEYLFK 1073
+ APE+L + DV+S G+ + P G+ + RQ
Sbjct: 222 YMAPELL-QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPE-----FTA 275
Query: 1074 ELTQEATRFL--ML 1085
L+ E L ML
Sbjct: 276 GLSSELRSVLVMML 289
Score = 61.2 bits (149), Expect = 7e-10
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 464 GGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
G L + E + Y+R L L ++H + HL + P ++ + G
Sbjct: 140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG--RCK 197
Query: 523 LTDFGLSRRITSFGKLN 539
L DFGL + + G
Sbjct: 198 LGDFGLLVELGTAGAGE 214
Score = 53.5 bits (129), Expect = 2e-07
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 7/91 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGAS-PFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APE+L + DV+S G+ + P G+ + RQ L
Sbjct: 224 APELL-QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPE-----FTAGL 277
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ E L+++ + P R T E L
Sbjct: 278 SSELRSVLVMMLEPDPKLRATAEALLALPVL 308
Score = 33.8 bits (78), Expect = 0.29
Identities = 11/47 (23%), Positives = 15/47 (31%)
Query: 45 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
G ++ LG G G V+ + GR YA K
Sbjct: 44 PGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRS 90
Score = 32.7 bits (75), Expect = 0.78
Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 13/116 (11%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAK----LFEYSHDTLHQVNTEFDNLRSL- 650
+Q +S + G + V K K L A K F D ++ E + +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSK-EDGRLYAVKRSMSPFRGPKDRARKLA-EVGSHEKVG 114
Query: 651 RHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEY-TEQNVATIISQ 705
+H L +A++ I L E L G + + + E V +
Sbjct: 115 QHPCCVRLEQAWE----EGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRD 165
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 112 bits (283), Expect = 2e-26
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLV 243
+ D LG G G + + R+ A K + + S E+ ++ + H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRIL---PECFSFADREVQLLRESDEHPNVI 81
Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIA 302
R + + + I EL L + ++ + + + ++Q SGL ++H L+I
Sbjct: 82 RYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIV 140
Query: 303 HLGLTPGDLLVAHPGGRHLL---LTDFGLSRRIT----SFGKLNPL 341
H L P ++L++ P + ++DFGL +++ SF + + +
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Score = 76.3 bits (188), Expect = 2e-14
Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 15/150 (10%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS---VRSVQVKLIDLG----CTQRVTKL 1001
+ GL +LH + H +++P N++++ ++ + D G
Sbjct: 121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQT---DVWSAGVLAYVLLS-GASPFRGQSEPET 1057
T + APE+L+E+ T D++SAG + Y ++S G+ PF + +
Sbjct: 181 SRRSGVPGTEG--WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA 238
Query: 1058 RQNVNFVRYRFEYLFKELTQEATRFL--ML 1085
+ + K A + M+
Sbjct: 239 NILLGACSLDCLHPEKHEDVIARELIEKMI 268
Score = 62.5 bits (152), Expect = 4e-10
Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 464 GGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
L + ++ + + + ++Q SGL ++H L+I H L P ++L++ P +
Sbjct: 101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKI 160
Query: 523 ---LTDFGLSRRIT----SFGKLNPL 541
++DFGL +++ SF + + +
Sbjct: 161 KAMISDFGLCKKLAVGRHSFSRRSGV 186
Score = 62.5 bits (152), Expect = 5e-10
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 15/151 (9%)
Query: 1143 QAPEVLAEEPIFPQT---DVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYL 1198
APE+L+E+ T D++SAG + Y ++S G+ PF + + + +
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHP 252
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEY----------MIKKRERAVF 1248
K A + + P KRP+ + ++ + E I+K
Sbjct: 253 EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKESLDGP 312
Query: 1249 LGNRLKEFSDEYHDLK-NKQFTSDSLSSLHK 1278
+ +L+ + + T + L K
Sbjct: 313 IVKQLERGGRAVVKMDWRENITVPLQTDLRK 343
Score = 34.0 bits (78), Expect = 0.32
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ D LG G G + + R+ A K +
Sbjct: 26 FCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRI 56
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 109 bits (275), Expect = 5e-26
Identities = 40/195 (20%), Positives = 71/195 (36%), Gaps = 6/195 (3%)
Query: 142 RGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYH 201
+ S + + E+ + + V + +GRG G V+
Sbjct: 17 AKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHR 76
Query: 202 AVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL 261
++ +G A K + + + EL L +V L+ + I EL
Sbjct: 77 MKDKQTGFQCAVKKV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131
Query: 262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 321
GG L + + E +Y+ Q L GL+Y+H I H + ++L++ G R
Sbjct: 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-A 190
Query: 322 LLTDFGLSRRITSFG 336
L DFG + + G
Sbjct: 191 ALCDFGHALCLQPDG 205
Score = 57.8 bits (140), Expect = 9e-09
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN-- 1012
L+GL+YLH R + H +++ DN V+ S + L D G + G +
Sbjct: 159 ALEGLEYLHTRRILHGDVKADN-VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 1013 --PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
APEV+ +P + D+WS+ + +L+G P+
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
Score = 56.7 bits (137), Expect = 2e-08
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG L + + E +Y+ Q L GL+Y+H I H + ++L++ G R
Sbjct: 133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-AA 191
Query: 523 LTDFGLSRRITSFGKLNPLEYGN 545
L DFG + + G L G+
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGD 214
Score = 38.9 bits (91), Expect = 0.009
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 22/94 (23%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR-----------GQSEPETRQNVNFVR 1192
APEV+ +P + D+WS+ + +L+G P+ P R+
Sbjct: 224 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIRE------ 277
Query: 1193 YRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEE 1226
+ + + ++ P R + E
Sbjct: 278 -----IPPSCAPLTAQAIQEGLRKEPVHRASAME 306
Score = 36.3 bits (84), Expect = 0.055
Identities = 12/75 (16%), Positives = 25/75 (33%)
Query: 17 RNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYH 76
S+ S + + E+ + + V + +GRG G V+
Sbjct: 17 AKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHR 76
Query: 77 AVERSSGRNYAAKVM 91
++ +G A K +
Sbjct: 77 MKDKQTGFQCAVKKV 91
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 110 bits (277), Expect = 6e-26
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNL 242
Y ++G G + V+ + + YA K + + ++L ++NE+ +N+L +
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 243 --VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
+RL+D T ++ E G +L L ++ ++ Y + +L + +H+
Sbjct: 117 KIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
I H L P + L+ L L DFG++ ++ +
Sbjct: 176 IVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKD 214
Score = 69.8 bits (171), Expect = 2e-12
Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTP 1011
+L+ + +H G+ H +++P N ++ +KLID G ++ T + +
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVVKDSQVGAV 220
Query: 1012 NPEFAAPEVLAEEPIF-----------PQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQ 1059
N + PE + + P++DVWS G + Y + G +PF+
Sbjct: 221 N--YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
+ + E+ ++ L K + I++ + H +
Sbjct: 279 AIIDPNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
Score = 59.8 bits (145), Expect = 3e-09
Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 15/162 (9%)
Query: 1144 APEVLAEEPIF-----------PQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFV 1191
PE + + P++DVWS G + Y + G +PF+ +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283
Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGN 1251
+ E+ ++ L KR P +R ++ E + ++ + + + +
Sbjct: 284 NHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGT--TE 340
Query: 1252 RLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELIST 1293
+K + L + + +L++ + S T
Sbjct: 341 EMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKT 382
Score = 57.1 bits (138), Expect = 2e-08
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
+L L ++ ++ Y + +L + +H+ I H L P + L+ L L
Sbjct: 139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKL 195
Query: 524 TDFGLSRRITSFGKLNPLE 542
DFG++ ++ +
Sbjct: 196 IDFGIANQMQPDTTSVVKD 214
Score = 51.4 bits (123), Expect = 1e-06
Identities = 30/142 (21%), Positives = 48/142 (33%), Gaps = 15/142 (10%)
Query: 572 AQDPPPLNYSVEDSPIEWSTEPPTDK---YQFISEIHRGKFSVVVKAAEKANTENLVAAK 628
D P L +D + E + K Y + +I G S V + + + A K
Sbjct: 29 HMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQV--LNEKKQIYAIK 86
Query: 629 ---LFEYSHDTLHQVNTEFDNLRSLRH--ERIASLLEAYKPSTTASNIAVLVMEKLQGAD 683
L E + TL E L L+ ++I L + T I +VME D
Sbjct: 87 YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI---TDQYI-YMVMECGNI-D 141
Query: 684 VLSYLSSRHEYTEQNVATIISQ 705
+ S+L + +
Sbjct: 142 LNSWLKKKKSIDPWERKSYWKN 163
Score = 30.6 bits (69), Expect = 3.6
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
Y ++G G + V+ + + YA K +
Sbjct: 58 YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYV 88
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 110 bits (275), Expect = 7e-26
Identities = 29/206 (14%), Positives = 71/206 (34%), Gaps = 19/206 (9%)
Query: 151 SVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERS---- 206
++ V N + ++ + KT + + LG G VY A +
Sbjct: 33 GLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDA 92
Query: 207 -SGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG 265
+ + + KV + ++ + ++ + ++ ++ ++ EL G
Sbjct: 93 KNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYG 152
Query: 266 ELLHSLTRQSYYT-----EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR- 319
LL+++ + + + ++L ++ +H I H + P + ++ +
Sbjct: 153 TLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ 212
Query: 320 --------HLLLTDFGLSRRITSFGK 337
L L D G S + F K
Sbjct: 213 DDEDDLSAGLALIDLGQSIDMKLFPK 238
Score = 75.8 bits (186), Expect = 2e-14
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 14/133 (10%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASV---------RSVQVKLIDLGCTQRVTKLG--- 1002
+L ++ +H + H +I+PDN ++ + S + LIDLG + +
Sbjct: 181 MLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
T F E+L+ +P Q D + Y +L G E +
Sbjct: 241 IFTAKCETS--GFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGL 298
Query: 1063 FVRYRFEYLFKEL 1075
F R ++ E
Sbjct: 299 FRRLPHLDMWNEF 311
Score = 53.8 bits (129), Expect = 2e-07
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 14/89 (15%)
Query: 463 PGGELLHSLTRQSYYT-----EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG 517
G LL+++ + + + ++L ++ +H I H + P + ++ +
Sbjct: 150 SYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGF 209
Query: 518 GR---------HLLLTDFGLSRRITSFGK 537
L L D G S + F K
Sbjct: 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPK 238
Score = 48.8 bits (116), Expect = 8e-06
Identities = 12/59 (20%), Positives = 20/59 (33%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
E+L+ +P Q D + Y +L G E + F R ++ E
Sbjct: 253 CVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEF 311
Score = 46.5 bits (110), Expect = 4e-05
Identities = 18/148 (12%), Positives = 42/148 (28%), Gaps = 28/148 (18%)
Query: 571 LAQDPPPL----NYSVEDSPI-----EWSTEPPTDKYQFISEIHRGKFSVVVKAAEKAN- 620
L+ P+ N + + + + + G F+ V +A +
Sbjct: 31 LSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLN 90
Query: 621 ---TENLVAAK------LFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI 671
+ K +E+ + + L+ A+ N
Sbjct: 91 DAKNKQKFVLKVQKPANPWEF-----YIGTQLMERLKPSMQHMFMKFYSAHL----FQNG 141
Query: 672 AVLVMEKLQGADVLSYLSSRHEYTEQNV 699
+VLV E +L+ ++ E+ +
Sbjct: 142 SVLVGELYSYGTLLNAINLYKNTPEKVM 169
Score = 36.9 bits (85), Expect = 0.037
Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 9/80 (11%)
Query: 17 RNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYH 76
+ S +S V+ + N + ++ + KT + + LG G VY
Sbjct: 28 FKLLSGLSKPVSSY----PNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYE 83
Query: 77 AVERS-----SGRNYAAKVM 91
A + + + + KV
Sbjct: 84 ATQGDLNDAKNKQKFVLKVQ 103
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 111 bits (279), Expect = 8e-26
Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 24/183 (13%)
Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK 228
+R + + + + LG G +G V GR A K M +
Sbjct: 1 SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRML-IDFC--DIAL 56
Query: 229 NELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELL-------HSLTRQSYYTEY 280
E+ ++ + H N++R + S T I EL L S EY
Sbjct: 57 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEY 115
Query: 281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH-----------LLLTDFGLS 329
+ +RQ+ SG+ ++H L I H L P ++LV+ +L++DFGL
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 330 RRI 332
+++
Sbjct: 176 KKL 178
Score = 63.6 bits (155), Expect = 2e-10
Identities = 30/150 (20%), Positives = 63/150 (42%), Gaps = 26/150 (17%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMAS-----------VRSVQVKLIDLG-CTQRVTKLG 1002
+ G+ +LH + H +++P N+++++ ++++ + D G C + +
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 1003 TLIHPINTP--NPEFAAPEVLAEEPIFPQT-------DVWSAGVLAYVLLS-GASPFRGQ 1052
+ +N P + APE+L E D++S G + Y +LS G PF +
Sbjct: 184 SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243
Query: 1053 SEPET---RQNVNFVRYRFEYLFKELTQEA 1079
E+ R + + + + L EA
Sbjct: 244 YSRESNIIRGIFSLDEMKCLHD-RSLIAEA 272
Score = 57.1 bits (138), Expect = 2e-08
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 18/87 (20%)
Query: 464 GGELL-------HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 516
L S EY+ +RQ+ SG+ ++H L I H L P ++LV+
Sbjct: 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 151
Query: 517 GGRH-----------LLLTDFGLSRRI 532
+L++DFGL +++
Sbjct: 152 SRFTADQQTGAENLRILISDFGLCKKL 178
Score = 53.6 bits (129), Expect = 3e-07
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 16/108 (14%)
Query: 1143 QAPEVLAEEPIFPQT-------DVWSAGVLAYVLLS-GASPFRGQSEPET---RQNVNFV 1191
+APE+L E D++S G + Y +LS G PF + E+ R +
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD 258
Query: 1192 RYRFEYLFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSE 1237
+ + + L EAT + M+ P KRPT + + P
Sbjct: 259 EMKCLHD-RSLIAEATDLISQMIDHD--PLKRPTAMKVLRHPLFWPKS 303
Score = 37.1 bits (86), Expect = 0.043
Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 44 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+R + + + + LG G +G V GR A K M
Sbjct: 1 SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRM 47
Score = 30.1 bits (68), Expect = 4.6
Identities = 16/117 (13%), Positives = 29/117 (24%), Gaps = 15/117 (12%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLR-SLRHER 654
+ + G VV VA K E L S H
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQGRP--VAVKRMLIDF--CDIALMEIKLLTESDDHPN 70
Query: 655 IASLLEAYKPSTTASNIAVLVMEKLQG--ADVL----SYLSSRHEYTEQNVATIISQ 705
+ + T + + +E D++ + E N +++ Q
Sbjct: 71 VIRYYCSET---TDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 109 bits (274), Expect = 9e-26
Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHR 240
+ Y ++G G G GR Y K + + ++ + + E+ ++ + H
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHR 298
N+V+ +S+E S I+ + GG+L + Q + E I + Q+ L ++H
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
I H + ++ + G + L DFG++R + S
Sbjct: 144 RKILHRDIKSQNIFLTKDG--TVQLGDFGIARVLNS 177
Score = 62.4 bits (152), Expect = 3e-10
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 19/116 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG--------CTQRVTKLGTLIH 1006
+ L+++H R + H +I+ N+ + + V+L D G +GT
Sbjct: 134 ICLALKHVHDRKILHRDIKSQNIFLT--KDGTVQLGDFGIARVLNSTVELARACIGT--- 188
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
P + +PE+ +P ++D+W+ G + Y L + F S +
Sbjct: 189 ------PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
Score = 57.8 bits (140), Expect = 9e-09
Identities = 24/134 (17%), Positives = 51/134 (38%), Gaps = 4/134 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
+PE+ +P ++D+W+ G + Y L + F S + + F + +
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI--ISGSFPPVSLHYS 250
Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEYH 1261
+ + +FKR P RP+V E ++ +++ + F +F +
Sbjct: 251 YDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPI 310
Query: 1262 DLKNKQFTSDSLSS 1275
K +S+S
Sbjct: 311 PAKRPASGQNSISV 324
Score = 51.2 bits (123), Expect = 1e-06
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 463 PGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
GG+L + Q + E I + Q+ L ++H I H + ++ + G
Sbjct: 106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--T 163
Query: 521 LLLTDFGLSRRITS 534
+ L DFG++R + S
Sbjct: 164 VQLGDFGIARVLNS 177
Score = 47.8 bits (114), Expect = 1e-05
Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 10/131 (7%)
Query: 580 YSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDT 636
S D E +KY + +I G F + K + S
Sbjct: 8 SSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTE-DGRQYVIKEINISRMSSKE 66
Query: 637 LHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--Y 694
+ E L +++H I E+++ + +VM+ +G D+ ++++ +
Sbjct: 67 REESRREVAVLANMKHPNIVQYRESFE----ENGSLYIVMDYCEGGDLFKRINAQKGVLF 122
Query: 695 TEQNVATIISQ 705
E + Q
Sbjct: 123 QEDQILDWFVQ 133
Score = 34.3 bits (79), Expect = 0.24
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ Y ++G G G GR Y K +
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI 57
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 106 bits (266), Expect = 6e-25
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
R V + P D ++G G TGIV A E+ SGR A K+M + Q + L NE+
Sbjct: 35 RMVVDQGDP-RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEV 93
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
IM H N+V ++ SY + ++ E GG L + Q E IA +L
Sbjct: 94 VIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT-DIVSQVRLNEEQIATVCEAVLQ 152
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L Y+H + H + +L+ G + L+DFG +I+
Sbjct: 153 ALAYLHAQGVIHRDIKSDSILLTLDG--RVKLSDFGFCAQISK 193
Score = 58.9 bits (143), Expect = 3e-09
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
A +VL L YLH +G+ H +I+ D++++ +VKL D G C Q R +
Sbjct: 144 ATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKDVPKRKSL 201
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APEV++ + D+WS G++ ++ G P+
Sbjct: 202 VGT---------PYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
Score = 45.1 bits (107), Expect = 1e-04
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L + Q E IA +L L Y+H + H + +L+ G + L
Sbjct: 126 GGALT-DIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG--RVKL 182
Query: 524 TDFGLSRRITS 534
+DFG +I+
Sbjct: 183 SDFGFCAQISK 193
Score = 38.5 bits (90), Expect = 0.010
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 47 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
R V + P D ++G G TGIV A E+ SGR A K+M
Sbjct: 35 RMVVDQGDP-RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM 78
Score = 30.8 bits (70), Expect = 2.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEV++ + D+WS G++ ++ G P+
Sbjct: 209 APEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 105 bits (264), Expect = 1e-24
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 9/159 (5%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCH 239
+ ++GRG VY A G A K + + ++ E+D++ QL H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDY 295
N+++ + S+ + I+ ELA G+L + E + Y QL S L++
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
MH + H + P ++ + G + L D GL R +S
Sbjct: 152 MHSRRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSS 188
Score = 56.2 bits (136), Expect = 2e-08
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG--------CTQRVTKLGTLIH 1006
+ L+++H R + H +I+P NV + + VKL DLG T + +GT
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFIT--ATGVVKLGDLGLGRFFSSKTTAAHSLVGT--- 199
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
P + +PE + E ++D+WS G L Y + + SPF G
Sbjct: 200 ------PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 240
Score = 50.4 bits (121), Expect = 2e-06
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE-L 1202
+PE + E ++D+WS G L Y + + SPF G + + L +
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHY 263
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPS 1236
++E + + + P KRP V ++ + +
Sbjct: 264 SEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297
Score = 48.8 bits (117), Expect = 5e-06
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 463 PGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
G+L + E + Y QL S L++MH + H + P ++ + G
Sbjct: 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG- 173
Query: 519 RHLLLTDFGLSRRITS 534
+ L D GL R +S
Sbjct: 174 -VVKLGDLGLGRFFSS 188
Score = 44.6 bits (106), Expect = 1e-04
Identities = 27/143 (18%), Positives = 46/143 (32%), Gaps = 14/143 (9%)
Query: 572 AQDPPPLNYSVEDSPIEWSTEPPT-DKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-- 628
PP+ + T ++ +I RG+FS V +AA VA K
Sbjct: 7 GMQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACL-LDGVPVALKKV 65
Query: 629 -LFEY-SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLS 686
+F+ E D L+ L H + ++ N +V+E D+
Sbjct: 66 QIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI----EDNELNIVLELADAGDLSR 121
Query: 687 YLSSRHEY----TEQNVATIISQ 705
+ + E+ V Q
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQ 144
Score = 33.1 bits (76), Expect = 0.57
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ ++GRG VY A G A K +
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKV 65
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 103 bits (260), Expect = 2e-24
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 3/164 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ + K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
+ I H + P +LL+ +L ++DFGL+ + L
Sbjct: 124 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLN 165
Score = 63.8 bits (156), Expect = 7e-11
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 16/166 (9%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NP 1013
+ G+ YLH G+ H +I+P+N+++ +K+ D G V + +N
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDE--RDNLKISDFGLA-TVFRYNNRERLLNKMCGTL 171
Query: 1014 EFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEY 1070
+ APE+L DVWS G++ +L+G P+ S+ E Y +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 1071 LFKELTQEATRFLMLIFKHEVD---WITLANNIDHEFWHVKDLKRE 1113
K++ L I + IT+ + W+ K LK+
Sbjct: 232 --KKIDSAPLALLHKIL--VENPSARITIPDIKKDR-WYNKPLKKG 272
Score = 56.4 bits (137), Expect = 1e-08
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEYLFK 1200
APE+L DVWS G++ +L+G P+ S+ E Y + K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW--K 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
Score = 51.8 bits (125), Expect = 5e-07
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L
Sbjct: 88 SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLK 145
Query: 523 LTDFGLSRRITSFGKLNPLE 542
++DFGL+ + L
Sbjct: 146 ISDFGLATVFRYNNRERLLN 165
Score = 35.3 bits (82), Expect = 0.096
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 55 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
P + +D LG G G V AV R + A K++
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 105 bits (263), Expect = 3e-24
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
YDF ++G G G+ ++ + A K + +G + E+ L H N+VR
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVR 80
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ T II E A GGEL + ++E + + +QLLSG+ Y H + I H
Sbjct: 81 FKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHR 140
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
L + L+ L + DFG S+ +
Sbjct: 141 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174
Score = 76.2 bits (188), Expect = 1e-14
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH-PINTPNPE 1014
L G+ Y H +CH +++ +N ++ + ++K+ D G + + + L + + TP
Sbjct: 126 LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS-KSSVLHSQPKSTVGTPA-- 182
Query: 1015 FAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPE----TRQNVNFVRYRF- 1068
+ APEVL + DVWS GV YV+L GA PF EP T Q + V+Y
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP 242
Query: 1069 EYLFKELTQEATRFLMLIFKHEVD---WITLANNIDHEFWHVKDLKRE 1113
+ + ++ E + IF D I++ H W +K+L +
Sbjct: 243 DDIR--ISPECCHLISRIF--VADPATRISIPEIKTHS-WFLKNLPAD 285
Score = 63.9 bits (156), Expect = 1e-10
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPE----TRQNVNFVRYRF-EY 1197
APEVL + DVWS GV YV+L GA PF EP T Q + V+Y +
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDD 244
Query: 1198 LFKELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
+ ++ E + IF P R ++ E + W
Sbjct: 245 IR--ISPECCHLISRIFVADPATRISIPEIKTHSW 277
Score = 53.1 bits (128), Expect = 3e-07
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + ++E + + +QLLSG+ Y H + I H L + L+ L
Sbjct: 99 SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLK 158
Query: 523 LTDFGLSRRITSFGKL 538
+ DFG S+ +
Sbjct: 159 ICDFGYSKSSVLHSQP 174
Score = 45.0 bits (107), Expect = 1e-04
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 581 SVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQV 640
V P++ +D+Y F+ +I G F V + T+ LVA K E V
Sbjct: 5 PVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVA-RLMRDKLTKELVAVKYIERGAAIDENV 63
Query: 641 NTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTE 696
E N RSLRH I E T +++A ++ME G ++ + + ++E
Sbjct: 64 QREIINHRSLRHPNIVRFKEVIL---TPTHLA-IIMEYASGGELYERICNAGRFSE 115
Score = 33.1 bits (76), Expect = 0.61
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
YDF ++G G G+ ++ + A K +
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYI 53
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 104 bits (261), Expect = 3e-24
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNL 242
Y +G+G V A +GR A K++ T E+ IM L H N+
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
V+L + ET+ + +I E A GGE+ L E + RQ++S + Y H+ I
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
H L +LL+ ++ + DFG S T GKL+
Sbjct: 137 HRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLD 171
Score = 78.5 bits (194), Expect = 2e-15
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ +QY H + + H +++ +N+++ + + +K+ D G + T G L P
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTVGGKLDAFCGAPP-- 178
Query: 1015 FAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLF 1072
+AAPE+ + P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR Y+
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 238
Query: 1073 KELTQEATRFLML----------IFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSA 1122
+ RFL+L I K WI + D V+ ++ R+
Sbjct: 239 TDCENLLKRFLVLNPIKRGTLEQIMKDR--WINAGHEEDELKPFVEPELDISDQK-RIDI 295
Query: 1123 KNVIGWSEKGIPSALFKTK 1141
+G+S++ I +L K K
Sbjct: 296 MVGMGYSQEEIQESLSKMK 314
Score = 69.3 bits (170), Expect = 2e-12
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APE+ + P+ DVWS GV+ Y L+SG+ PF GQ+ E R+ V +YR + +
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF---YM 237
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + L P KR T+E+ ++RW+
Sbjct: 238 STDCENLLKRFLVLNPIKRGTLEQIMKDRWI 268
Score = 55.8 bits (135), Expect = 4e-08
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGE+ L E + RQ++S + Y H+ I H L +LL+ ++
Sbjct: 97 SGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM--NIK 154
Query: 523 LTDFGLSRRITSFGKLN 539
+ DFG S T GKL+
Sbjct: 155 IADFGFSNEFTVGGKLD 171
Score = 40.7 bits (96), Expect = 0.002
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNLR 648
+P Y+ + I +G F+ V K A T VA K+ + + +L ++ E ++
Sbjct: 11 QPHIGNYRLLKTIGKGNFAKV-KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTE 696
L H I L E + T + L+ME G +V YL + E
Sbjct: 70 ILNHPNIVKLFEVIE---TEKTL-YLIMEYASGGEVFDYLVAHGRMKE 113
Score = 31.5 bits (72), Expect = 1.9
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVE 106
Y +G+G V A +GR A K++ K ++ + +
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIID-KTQLNPTSLQKLF 62
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 103 bits (259), Expect = 3e-24
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
R + + P Y +++G+G +G VY A++ ++G+ A + M + K L NE+
Sbjct: 10 RSIVSVGDP-KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+M + + N+V DSY D ++ E GG L + ++ E IA R+ L
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQ 127
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L+++H + H + ++L+ G + LTDFG +IT
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITP 168
Score = 59.2 bits (144), Expect = 2e-09
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 19/109 (17%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
A L L++LH + H +I+ DN+++ VKL D G C Q R T
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKRSTM 176
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 177 VGT---------PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Score = 43.4 bits (103), Expect = 3e-04
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L + ++ E IA R+ L L+++H + H + ++L+ G + L
Sbjct: 101 GGSLT-DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 157
Query: 524 TDFGLSRRITS 534
TDFG +IT
Sbjct: 158 TDFGFCAQITP 168
Score = 42.3 bits (100), Expect = 7e-04
Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 15/132 (11%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQ-VNTEFDNLR 648
S P KY +I +G V A + A T VA + + + E +R
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVA-TGQEVAIRQMNLQQQPKKELIINEILVMR 72
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQG---ADVLSYLSSRHEYTEQNVATIISQ 705
++ I + L++Y +VME L G DV+ + E +A + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDE----LWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRE 124
Query: 706 AWE--HYLKKNR 715
+ +L N+
Sbjct: 125 CLQALEFLHSNQ 136
Score = 38.1 bits (89), Expect = 0.013
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 47 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
R + + P Y +++G+G +G VY A++ ++G+ A + M
Sbjct: 10 RSIVSVGDP-KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM 53
Score = 30.4 bits (69), Expect = 3.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEV+ + P+ D+WS G++A ++ G P+
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 101 bits (253), Expect = 2e-23
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLF---KNEL 231
K + Y GD LG G G V + +G A K++ + + + K E+
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
+ H ++++L+ T F ++ E GGEL + + E + +Q+LS
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS 122
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
+DY HR + H L P ++L+ + + DFGLS ++ L
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLR 168
Score = 69.5 bits (171), Expect = 8e-13
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L + Y H + H +++P+NV++ + + K+ D G + ++ L +PN
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMSDGEFLRTSCGSPN-- 175
Query: 1015 FAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
+AAPEV++ P+ D+WS GV+ Y LL G PF + P + + +
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE--- 232
Query: 1074 ELTQEATRFL--MLIFKHEVD---WITLANNIDHEFWHVKDLKR 1112
L + L ML +VD T+ + +HE W +DL
Sbjct: 233 YLNRSVATLLMHML----QVDPLKRATIKDIREHE-WFKQDLPS 271
Score = 61.8 bits (151), Expect = 3e-10
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV++ P+ D+WS GV+ Y LL G PF + P + + + L
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE---YL 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ LM + + P KR T+++ E+ W
Sbjct: 235 NRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
Score = 53.4 bits (129), Expect = 1e-07
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + + E + +Q+LS +DY HR + H L P ++L+ +
Sbjct: 94 SGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM--NAK 151
Query: 523 LTDFGLSRRITSFGKLN 539
+ DFGLS ++ L
Sbjct: 152 IADFGLSNMMSDGEFLR 168
Score = 32.6 bits (75), Expect = 0.72
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 50 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
K + Y GD LG G G V + +G A K++
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKIL 44
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 100 bits (252), Expect = 2e-23
Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 24/173 (13%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
+ + +G G G V+ A R G+ Y K + + E+ + +L H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIVH 68
Query: 245 LHDSYETKDSFT----------------IISELAGGGELLHSLTRQ--SYYTEYDIAHYI 286
+ ++ D I E G L + ++ +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
Q+ G+DY+H + + L P ++ + + + DFGL + + GK
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRT 179
Score = 60.0 bits (146), Expect = 1e-09
Identities = 19/95 (20%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+ G+ Y+H + L + +++P N+ + + QVK+ D G + G T
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLV--DTKQVKIGDFGLVTSLKNDGKRTRSKGTLR-- 186
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+ +PE ++ + + D+++ G++ LL
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 221
Score = 54.6 bits (132), Expect = 7e-08
Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 463 PGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
G L + ++ + Q+ G+DY+H + + L P ++ +
Sbjct: 103 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK--Q 160
Query: 521 LLLTDFGLSRRITSFGKLN 539
+ + DFGL + + GK
Sbjct: 161 VKIGDFGLVTSLKNDGKRT 179
Score = 45.7 bits (109), Expect = 5e-05
Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 7/103 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
+PE ++ + + D+++ G++ LL ET + +R +
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELLHVCDTA-----FETSKFFTDLRDG--IISDIFD 241
Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERA 1246
++ L + + P RP E + +R A
Sbjct: 242 KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHTA 284
Score = 39.6 bits (93), Expect = 0.005
Identities = 19/124 (15%), Positives = 36/124 (29%), Gaps = 18/124 (14%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERI 655
++ I I G F V KA + K +Y+++ + E L L H I
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRI-DGKTYVIKRVKYNNEKAER---EVKALAKLDHVNI 66
Query: 656 ASLLEAY------------KPSTTASNIAVLVMEKLQGADVLSYLSSRHEY--TEQNVAT 701
+ S + + + ME + ++ R +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 702 IISQ 705
+ Q
Sbjct: 127 LFEQ 130
Score = 33.4 bits (77), Expect = 0.41
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ + +G G G V+ A R G+ Y K +
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV 44
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 101 bits (253), Expect = 3e-23
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 3/164 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLC 238
P + +D LG G G V AV R + A K++ + K E+ I L
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N+V+ + + + E GGEL + E D + QL++G+ Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
+ I H + P +LL+ +L ++DFGL+ + L
Sbjct: 124 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLN 165
Score = 62.7 bits (153), Expect = 2e-10
Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 16/166 (9%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NP 1013
+ G+ YLH G+ H +I+P+N+++ +K+ D G V + +N
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLLLDE--RDNLKISDFGLA-TVFRYNNRERLLNKMCGTL 171
Query: 1014 EFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEY 1070
+ APE+L DVWS G++ +L+G P+ S+ E Y +
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231
Query: 1071 LFKELTQEATRFLMLIFKHEVD---WITLANNIDHEFWHVKDLKRE 1113
K++ L I + IT+ + W+ K LK+
Sbjct: 232 --KKIDSAPLALLHKIL--VENPSARITIPDIKKDR-WYNKPLKKG 272
Score = 56.9 bits (138), Expect = 2e-08
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEYLFK 1200
APE+L DVWS G++ +L+G P+ S+ E Y + K
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW--K 232
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
++ L I P R T+ + ++RW
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRW 264
Score = 50.8 bits (122), Expect = 1e-06
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + E D + QL++G+ Y+H + I H + P +LL+ +L
Sbjct: 88 SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLK 145
Query: 523 LTDFGLSRRITSFGKLNPLE 542
++DFGL+ + L
Sbjct: 146 ISDFGLATVFRYNNRERLLN 165
Score = 35.0 bits (81), Expect = 0.15
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 55 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
P + +D LG G G V AV R + A K++
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV 40
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 100 bits (252), Expect = 4e-23
Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 10/154 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
Y F +LG G V G YA K + Q + + E D+ H N++R
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 245 LHDSYETKDSFT----IISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYM 296
L + ++ G L + + + ++ TE I + + GL+ +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
H AH L P ++L+ G +L D G
Sbjct: 151 HAKGYAHRDLKPTNILLGDEG--QPVLMDLGSMN 182
Score = 59.3 bits (144), Expect = 3e-09
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 17/114 (14%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG----------CTQRVTKLGTL 1004
+ GL+ +H +G H +++P N+++ Q L+DLG +++ L
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGD--EGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200
Query: 1005 IHPINTPNPEFAAPEVLAEE---PIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
T + + APE+ + + I +TDVWS G + Y ++ G P+ +
Sbjct: 201 AAQRCTIS--YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK 252
Score = 53.1 bits (128), Expect = 3e-07
Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 4/113 (3%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIA 656
Y FI ++ G FS V + ++ + + E D R H I
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 657 SLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE----YTEQNVATIISQ 705
L+ A + A L++ + + + + + TE + ++
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Score = 50.4 bits (121), Expect = 2e-06
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 463 PGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
G L + + R ++ TE I + + GL+ +H AH L P ++L+ G
Sbjct: 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG- 171
Query: 519 RHLLLTDFGLSR 530
+L D G
Sbjct: 172 -QPVLMDLGSMN 182
Score = 48.9 bits (117), Expect = 5e-06
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 5/93 (5%)
Query: 1144 APEVLAEE---PIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFVRYRFEYLF 1199
APE+ + + I +TDVWS G + Y ++ G P+ + ++ +
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ-S 269
Query: 1200 KELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
+ + L + P +RP +
Sbjct: 270 PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302
Score = 30.8 bits (70), Expect = 2.7
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
Y F +LG G V G YA K +
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI 62
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 101 bits (253), Expect = 4e-23
Identities = 34/177 (19%), Positives = 70/177 (39%), Gaps = 11/177 (6%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--------TGKGNQY 223
+ + Y LG G G V+ AV++ + K + +
Sbjct: 13 EGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPK 72
Query: 224 KSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAG-GGELLHSLTRQSYYTEYDI 282
E+ I++++ H N++++ D +E + F ++ E G G +L + R E
Sbjct: 73 LGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLA 132
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
++ RQL+S + Y+ I H + ++++A + L DFG + +
Sbjct: 133 SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF--TIKLIDFGSAAYLERGKLFY 187
Score = 68.6 bits (168), Expect = 3e-12
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--N 1012
++ + YL + + H +I+ +N+V+A +KLID G + + G L + T
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAE--DFTIKLIDFG-SAAYLERGKLFY---TFCGT 192
Query: 1013 PEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPF 1049
E+ APEVL P P+ ++WS GV Y L+ +PF
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
Score = 57.4 bits (139), Expect = 1e-08
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEVL P P+ ++WS GV Y L+ +PF + Y +
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAIHPPY---LV 247
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++E + + + P +R T+E+ + W+
Sbjct: 248 SKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
Score = 54.7 bits (132), Expect = 8e-08
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
G G +L + R E ++ RQL+S + Y+ I H + ++++A +
Sbjct: 112 GSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF--TI 169
Query: 522 LLTDFGLSRRITSFGKLN 539
L DFG + +
Sbjct: 170 KLIDFGSAAYLERGKLFY 187
Score = 41.6 bits (98), Expect = 0.001
Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 17/136 (12%)
Query: 571 LAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF 630
+A + PP +VE + + KY +S + G F V A V K
Sbjct: 1 MALEEPPK--AVELEGLAACEGEYSQKYSTMSPLGSGAFGFV-WTAVDKEKNKEVVVKFI 57
Query: 631 E---------YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEK-LQ 680
+ L +V E L + H I +L+ ++ LVMEK
Sbjct: 58 KKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE---NQGFF-QLVMEKHGS 113
Query: 681 GADVLSYLSSRHEYTE 696
G D+ +++ E
Sbjct: 114 GLDLFAFIDRHPRLDE 129
Score = 33.5 bits (77), Expect = 0.45
Identities = 9/45 (20%), Positives = 16/45 (35%)
Query: 47 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ + Y LG G G V+ AV++ + K +
Sbjct: 13 EGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFI 57
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 98.9 bits (247), Expect = 2e-22
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
Y GD LG G G V ++ + A K++ + ++ K E+ ++ +L H+
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 241 NLVRLHD--SYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
N+++L D E K ++ E G E+L S+ + + Y QL+ GL+Y+
Sbjct: 67 NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF-PVCQAHGYFCQLIDGLEYL 125
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
H I H + PG+LL+ G L ++ G++ + F +
Sbjct: 126 HSQGIVHKDIKPGNLLLTTGG--TLKISALGVAEALHPFAADDTCR 169
Score = 70.4 bits (173), Expect = 6e-13
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 22/167 (13%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIHPINTPN 1012
+DGL+YLH +G+ H +I+P N+++ + +K+ LG T +P
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTTGG--TLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 1013 PEFAAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
F PE+ F + D+WSAGV Y + +G PF G + + +N+ Y
Sbjct: 177 --FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP- 233
Query: 1071 LFKELTQEATRFL--MLIFKHEVD---WITLANNIDHEFWHVKDLKR 1112
+ + L ML E + ++ H W K
Sbjct: 234 --GDCGPPLSDLLKGML----EYEPAKRFSIRQIRQHS-WFRKKHPP 273
Score = 61.1 bits (149), Expect = 5e-10
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 1143 QAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200
Q PE+ F + D+WSAGV Y + +G PF G + + +N+ Y
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---G 234
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + L + + P KR ++ + ++ W
Sbjct: 235 DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267
Score = 50.0 bits (120), Expect = 2e-06
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 461 RGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
E+L S+ + + Y QL+ GL+Y+H I H + PG+LL+ G
Sbjct: 91 VCGMQEMLDSVPEKRF-PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGG--T 147
Query: 521 LLLTDFGLSRRITSFGKLNPLE 542
L ++ G++ + F +
Sbjct: 148 LKISALGVAEALHPFAADDTCR 169
Score = 34.5 bits (80), Expect = 0.18
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
Y GD LG G G V ++ + A K++
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKIL 38
Score = 32.6 bits (75), Expect = 0.81
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-----DTLHQVNTEFDNLRSLR 651
KY + G + V K + T A K+ + + V E LR LR
Sbjct: 6 KYLMGDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64
Query: 652 HERIASLLEAYKPSTTASNIAVLVME 677
H+ + L++ + +VME
Sbjct: 65 HKNVIQLVDVLYNEEK-QKM-YMVME 88
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 97.3 bits (243), Expect = 3e-22
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMNQLCHR 240
Y LG G V A ++G+ A K++ K + + + E+ + L H
Sbjct: 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI-EREISYLRLLRHP 73
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
++++L+D ++KD ++ E AG EL + ++ +E + + +Q++S ++Y HR
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
I H L P +LL+ ++ + DFGLS +T L
Sbjct: 133 IVHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLK 169
Score = 69.6 bits (171), Expect = 8e-13
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
++ ++Y H + H +++P+N+++ + VK+ D G + +T L +PN
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDE--HLNVKIADFGLSNIMTDGNFLKTSCGSPN-- 176
Query: 1015 FAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
+AAPEV++ + P+ DVWS GV+ YV+L PF +S P +N++ Y
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK--- 233
Query: 1074 ELTQEATRFL--MLIFKHEVD---WITLANNIDHEFWHVKDLKR 1112
L+ A + ML V+ I++ + + W DL
Sbjct: 234 FLSPGAAGLIKRML----IVNPLNRISIHEIMQDD-WFKVDLPE 272
Score = 61.5 bits (150), Expect = 3e-10
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV++ + P+ DVWS GV+ YV+L PF +S P +N++ Y L
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK---FL 235
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ A + + P R ++ E ++ W
Sbjct: 236 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266
Score = 53.0 bits (128), Expect = 2e-07
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
G EL + ++ +E + + +Q++S ++Y HR I H L P +LL+ ++ +
Sbjct: 96 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL--NVKI 153
Query: 524 TDFGLSRRITSFGKLN 539
DFGLS +T L
Sbjct: 154 ADFGLSNIMTDGNFLK 169
Score = 32.6 bits (75), Expect = 0.76
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
Y LG G V A ++G+ A K++
Sbjct: 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKII 46
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 96.6 bits (241), Expect = 5e-22
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHR 240
+ Y+ +G G G +S G+ K + K + +E++++ +L H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 241 NLVRLHDSY--ETKDSFTIISELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGLD 294
N+VR +D T + I+ E GG+L +T+ + Y E + + QL L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 295 YMHRL-----SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
HR ++ H L P ++ + ++ L DFGL+R +
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNH 168
Score = 63.1 bits (154), Expect = 1e-10
Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 24/127 (18%)
Query: 955 VLDGLQYLHWRGLC-----HLNIEPDNVVMASVRSVQVKLIDLG--------CTQRVTKL 1001
+ L+ H R H +++P NV + VKL D G + T +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDG--KQNVKLGDFGLARILNHDTSFAKTFV 177
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
GT P + +PE + ++D+WS G L Y L + PF S+ E +
Sbjct: 178 GT---------PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 1062 NFVRYRF 1068
++R
Sbjct: 229 REGKFRR 235
Score = 60.4 bits (147), Expect = 8e-10
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
+PE + ++D+WS G L Y L + PF S+ E + +F + +
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--REGKFRRIPYRYS 241
Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
E + + RP+VEE EN ++
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILENPLILE 273
Score = 48.8 bits (117), Expect = 5e-06
Identities = 21/117 (17%), Positives = 45/117 (38%), Gaps = 10/117 (8%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDNLRSLRH 652
+ Y+ + I G + K K+ ++ K + + +E + LR L+H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE----YTEQNVATIISQ 705
I + + +VME +G D+ S ++ + E+ V +++Q
Sbjct: 65 PNIVRYYDRII--DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Score = 44.2 bits (105), Expect = 2e-04
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Query: 464 GGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRL-----SIAHLGLTPGDLLVA 514
GG+L +T+ + Y E + + QL L HR ++ H L P ++ +
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
Query: 515 HPGGRHLLLTDFGLSRRITS 534
++ L DFGL+R +
Sbjct: 151 GKQ--NVKLGDFGLARILNH 168
Score = 33.0 bits (76), Expect = 0.48
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ Y+ +G G G +S G+ K +
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL 39
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 96.6 bits (241), Expect = 6e-22
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLVR 244
F E+GRG VY ++ + A + + FK E +++ L H N+VR
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 89
Query: 245 LHDSY----ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--R 298
+DS+ + K +++EL G L L R + + RQ+L GL ++H
Sbjct: 90 FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 149
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
I H L ++ + P G + + D GL+ +
Sbjct: 150 PPIIHRDLKCDNIFITGPTGS-VKIGDLGLATLKRA 184
Score = 51.2 bits (123), Expect = 9e-07
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 949 AYCVTSVLDGLQYLHWRGLC--HLNIEPDNVVMASVRSVQVKLIDLGC------TQRVTK 1000
++C +L GLQ+LH R H +++ DN + + + VK+ DLG +
Sbjct: 133 SWC-RQILKGLQFLHTRTPPIIHRDLKCDN-IFITGPTGSVKIGDLGLATLKRASFAKAV 190
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT PEF APE+ EE DV++ G+ + + P+
Sbjct: 191 IGT---------PEFMAPEMY-EEKYDESVDVYAFGMCMLEMATSEYPY 229
Score = 45.0 bits (107), Expect = 1e-04
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--RLSIAHLGLTPGDLLVAHPGGRH 520
G L L R + + RQ+L GL ++H I H L ++ + P G
Sbjct: 112 TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS- 170
Query: 521 LLLTDFGLSRRITS 534
+ + D GL+ +
Sbjct: 171 VKIGDLGLATLKRA 184
Score = 44.3 bits (105), Expect = 1e-04
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 4/126 (3%)
Query: 583 EDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQ 639
E +F EI RG F V K + T VA + + +
Sbjct: 13 ELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTV-EVAWCELQDRKLTKSERQR 71
Query: 640 VNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNV 699
E + L+ L+H I ++++ + VLV E + + +YL + +
Sbjct: 72 FKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVL 131
Query: 700 ATIISQ 705
+ Q
Sbjct: 132 RSWCRQ 137
Score = 33.9 bits (78), Expect = 0.30
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--EYLFKE 1201
APE+ EE DV++ G+ + + P+ Q V K
Sbjct: 198 APEMY-EEKYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQIYRRVTSGVKPASFDKV 254
Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
E + ++ +R ++++ + +
Sbjct: 255 AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286
Score = 31.5 bits (72), Expect = 1.7
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 62 FGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
F E+GRG VY ++ + A +
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCEL 59
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 97.9 bits (244), Expect = 6e-22
Identities = 40/184 (21%), Positives = 62/184 (33%), Gaps = 31/184 (16%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM----------TGKGN 221
+ VK + K I D Y L +G + + YA K K N
Sbjct: 21 KYVKEKDKYIND-YRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSN 77
Query: 222 QYKSL-------FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL--- 271
K FKNEL I+ + + + D II E +L
Sbjct: 78 NDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF 137
Query: 272 -----TRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTD 325
+ I I+ +L+ Y+H +I H + P ++L+ G + L+D
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG--RVKLSD 195
Query: 326 FGLS 329
FG S
Sbjct: 196 FGES 199
Score = 66.3 bits (162), Expect = 2e-11
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 21/124 (16%)
Query: 955 VLDGLQYLH-WRGLCHLNIEPDNVVMASVRSVQVKLIDLGC------TQRVTKLGTLIHP 1007
VL+ Y+H + +CH +++P N++M +VKL D G + GT
Sbjct: 160 VLNSFSYIHNEKNICHRDVKPSNILMDKNG--RVKLSDFGESEYMVDKKIKGSRGT---- 213
Query: 1008 INTPNPEFAAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQ-SEPETRQNVNFV 1064
EF PE + E + + D+WS G+ YV+ PF + S E N+
Sbjct: 214 -----YEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268
Query: 1065 RYRF 1068
+
Sbjct: 269 NIEY 272
Score = 61.3 bits (149), Expect = 7e-10
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 28/130 (21%)
Query: 1144 APEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQ-SEPETRQNVNFVRYRF----- 1195
PE + E + + D+WS G+ YV+ PF + S E N+ +
Sbjct: 218 PPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRN 277
Query: 1196 -----------EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLV---------P 1235
L+ E FL L ++ P +R T E+ ++ WL
Sbjct: 278 HFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREF 337
Query: 1236 SEYMIKKRER 1245
S+ + KKR++
Sbjct: 338 SKELYKKRKK 347
Score = 49.7 bits (119), Expect = 4e-06
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 11/76 (14%)
Query: 463 PGGELLHSL--------TRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLV 513
+L + I I+ +L+ Y+H +I H + P ++L+
Sbjct: 126 ENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185
Query: 514 AHPGGRHLLLTDFGLS 529
G + L+DFG S
Sbjct: 186 DKNG--RVKLSDFGES 199
Score = 36.6 bits (85), Expect = 0.044
Identities = 17/143 (11%), Positives = 42/143 (29%), Gaps = 29/143 (20%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE------------------YSHDTL 637
+ Y+ I +++GKF+ + EK A K +E
Sbjct: 31 NDYRIIRTLNQGKFNKI-ILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 638 HQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQ 697
E + +++E + + ++ E ++ +L + +
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIIT---NYDEV-YIIYEYMENDSILKFDEYFFVLDKN 143
Query: 698 NVATIISQAWEHYLKKNREQIAD 720
I Q + +K + +
Sbjct: 144 YTCFIPIQVIKCIIK----SVLN 162
Score = 36.2 bits (84), Expect = 0.060
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Query: 47 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ VK + K I D Y L +G + + YA K
Sbjct: 21 KYVKEKDKYIND-YRIIRTLNQGKFNKIILC--EKDNKFYALKKY 62
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 96.6 bits (241), Expect = 7e-22
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 6/164 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIM 234
D LG+G GIVY + S+ A K + + ++Y E+ +
Sbjct: 14 LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALH 73
Query: 235 NQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY----YTEYDIAHYIRQLL 290
L H+N+V+ S+ I E GG L +L R + E I Y +Q+L
Sbjct: 74 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS-LSALLRSKWGPLKDNEQTIGFYTKQIL 132
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
GL Y+H I H + ++L+ G L ++DFG S+R+
Sbjct: 133 EGLKYLHDNQIVHRDIKGDNVLINTYSG-VLKISDFGTSKRLAG 175
Score = 54.2 bits (131), Expect = 9e-08
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-TPNP 1013
+L+GL+YLH + H +I+ DN V+ + S +K+ D G ++R+ + T
Sbjct: 131 ILEGLKYLHDNQIVHRDIKGDN-VLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ- 188
Query: 1014 EFAAPEVLAEEPI--FPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
+ APE++ + P D+WS G + +G PF EP
Sbjct: 189 -YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP 231
Score = 50.8 bits (122), Expect = 1e-06
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 463 PGGELLHSLTRQSY----YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
PGG L +L R + E I Y +Q+L GL Y+H I H + ++L+ G
Sbjct: 102 PGGSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSG 160
Query: 519 RHLLLTDFGLSRRITS 534
L ++DFG S+R+
Sbjct: 161 -VLKISDFGTSKRLAG 175
Score = 39.2 bits (92), Expect = 0.006
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 26/107 (24%)
Query: 1144 APEVLAEEPI--FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK- 1200
APE++ + P D+WS G + +G PF EP +FK
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP------------QAAMFKV 238
Query: 1201 -----------ELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPS 1236
++ EA F++ F+ P KR + + +L S
Sbjct: 239 GMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS 285
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 96.2 bits (240), Expect = 1e-21
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
V+ P + ++ ELG G G VY A + +G AAKV+ K + + E+
Sbjct: 9 EHVRRDLDP-NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI 67
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLT-RQSYYTEYDIAHYIRQLL 290
+I+ H +V+L +Y I+ E GG + + TE I RQ+L
Sbjct: 68 EILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 127
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L+++H I H L G++L+ G + L DFG+S +
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEG--DIRLADFGVSAKNLK 169
Score = 50.4 bits (121), Expect = 2e-06
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 24/113 (21%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
+L+ L +LH + + H +++ NV+M ++L D G + R +
Sbjct: 120 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL--EGDIRLADFGVSAKNLKTLQKRDSF 177
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIF-----PQTDVWSAGVLAYVLLSGASP 1048
+GT P + APEV+ E + + D+WS G+ + P
Sbjct: 178 IGT---------PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
Score = 45.0 bits (107), Expect = 9e-05
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRH 652
P + ++ + E+ G F V KA K T L AAK+ E S + L E + L + H
Sbjct: 17 PNEVWEIVGELGDGAFGKVYKAKNKE-TGALAAAKVIETKSEEELEDYIVEIEILATCDH 75
Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLS-YLSSRHEYTEQNVATIISQAWE--H 709
I LL AY +++E G V + L TE + + Q E +
Sbjct: 76 PYIVKLLGAYYHDGK----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN 131
Query: 710 YLKKNR 715
+L R
Sbjct: 132 FLHSKR 137
Score = 39.2 bits (92), Expect = 0.006
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
TE I RQ+L L+++H I H L G++L+ G + L DFG+S +
Sbjct: 115 TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG--DIRLADFGVSAKNLK 169
Score = 36.9 bits (86), Expect = 0.035
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 47 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
V+ P + ++ ELG G G VY A + +G AAKV+
Sbjct: 9 EHVRRDLDP-NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI 52
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 96.2 bits (240), Expect = 1e-21
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNE 230
++ + + +++G+G G V+ ++ + + A K++ + + E
Sbjct: 11 PGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE 70
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ +++Q + + + SY II E GGG L L E IA +R++L
Sbjct: 71 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREIL 129
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
GLDY+H H + ++L++ G + L DFG++ ++T
Sbjct: 130 KGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTD 171
Score = 54.2 bits (131), Expect = 1e-07
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
A + +L GL YLH H +I+ NV+++ +VKL D G Q R T
Sbjct: 122 ATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTDTQIKRNTF 179
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APEV+ + + D+WS G+ A L G P
Sbjct: 180 VGT---------PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH 219
Score = 44.6 bits (106), Expect = 1e-04
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 10/133 (7%)
Query: 587 IEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKL--FEYSHDTLHQVNTEF 644
++ P + + + +I +G F V K + T+ +VA K+ E + D + + E
Sbjct: 13 MQNLKADPEELFTKLEKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEAEDEIEDIQQEI 71
Query: 645 DNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIIS 704
L + +Y T ++ME L G L L E +ATI+
Sbjct: 72 TVLSQCDSPYVTKYYGSYLKDTK----LWIIMEYLGGGSALDLLEPG-PLDETQIATILR 126
Query: 705 QAWE--HYLKKNR 715
+ + YL +
Sbjct: 127 EILKGLDYLHSEK 139
Score = 42.7 bits (101), Expect = 6e-04
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GG L L E IA +R++L GLDY+H H + ++L++ G + L
Sbjct: 104 GGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKL 160
Query: 524 TDFGLSRRITS 534
DFG++ ++T
Sbjct: 161 ADFGVAGQLTD 171
Score = 38.1 bits (89), Expect = 0.014
Identities = 6/45 (13%), Positives = 21/45 (46%)
Query: 47 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
++ + + +++G+G G V+ ++ + + A K++
Sbjct: 11 PGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII 55
Score = 35.4 bits (82), Expect = 0.11
Identities = 31/140 (22%), Positives = 51/140 (36%), Gaps = 34/140 (24%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG-----------QSEPETRQNVNFVR 1192
APEV+ + + D+WS G+ A L G P ++ P T +
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG----- 241
Query: 1193 YRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNR 1252
+ KE F+ + P RPT +E ++++ I + + +
Sbjct: 242 -NYSKPLKE-------FVEACLNKEPSFRPTAKELLKHKF-------ILRNAKKT---SY 283
Query: 1253 LKEFSDEYHDLKNKQFTSDS 1272
L E D Y K +Q DS
Sbjct: 284 LTELIDRYKRWKAEQSHDDS 303
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 95.9 bits (239), Expect = 1e-21
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLC-HRN 241
+ +++G G G V+ V+R G YA K G+ + E+ L H +
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMH 297
+VR ++ D I +E GG L +++ SY+ E ++ + Q+ GL Y+H
Sbjct: 73 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLL-----------------LTDFGLSRRITS 334
+S+ H+ + P ++ ++ + + D G RI+S
Sbjct: 133 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186
Score = 58.1 bits (141), Expect = 5e-09
Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 23/118 (19%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNV-----------------VMASVRSVQVKLIDLGCTQR 997
V GL+Y+H L H++I+P N+ + V K+ DLG R
Sbjct: 124 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 183
Query: 998 VTKLGTLIHPINTPNPEFAAPEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
++ F A EVL E P+ D+++ + R +
Sbjct: 184 ISSPQVE---EGDSR--FLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236
Score = 47.7 bits (114), Expect = 1e-05
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 21/93 (22%)
Query: 463 PGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
GG L +++ SY+ E ++ + Q+ GL Y+H +S+ H+ + P ++ ++
Sbjct: 94 NGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSI 153
Query: 519 RHLL-----------------LTDFGLSRRITS 534
+ + D G RI+S
Sbjct: 154 PNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186
Score = 46.2 bits (110), Expect = 3e-05
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Query: 1144 APEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
A EVL E P+ D+++ + R + + R + + L
Sbjct: 198 ANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH-----EIRQGRLPRIPQVL 252
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPS 1236
+QE T L ++ P +RP+ ++ L+ +
Sbjct: 253 SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286
Score = 31.9 bits (73), Expect = 1.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAK 89
+ +++G G G V+ V+R G YA K
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK 42
Score = 30.0 bits (68), Expect = 4.4
Identities = 18/120 (15%), Positives = 36/120 (30%), Gaps = 13/120 (10%)
Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDNLRSL 650
T ++ + +I G+F V K ++ + + A K E L
Sbjct: 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGC-IYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 651 -RHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEY----TEQNVATIISQ 705
+H + A+ I E G + +S + E + ++ Q
Sbjct: 68 GQHSHVVRYFSAWAEDDHM-LI---QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 98.7 bits (246), Expect = 1e-21
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 7/169 (4%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNE 230
K + Y GD LG G G V +G A K++ + + + E
Sbjct: 8 KHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI-RRE 66
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
+ + H ++++L+ T ++ E GGEL + + E + +Q+L
Sbjct: 67 IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL 126
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
SG+DY HR + H L P ++L+ + + DFGLS ++ L
Sbjct: 127 SGVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLR 173
Score = 67.5 bits (165), Expect = 1e-11
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 22/166 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--N 1012
+L G+ Y H + H +++P+NV++ + + K+ D G + G + T +
Sbjct: 125 ILSGVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFG-LSNMMSDGEFLR---TSCGS 178
Query: 1013 PEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
P +AAPEV++ P+ D+WS+GV+ Y LL G PF P + + +
Sbjct: 179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ- 237
Query: 1072 FKELTQEATRFL--MLIFKHEVD---WITLANNIDHEFWHVKDLKR 1112
L L ML +VD T+ + +HE W +DL +
Sbjct: 238 --YLNPSVISLLKHML----QVDPMKRATIKDIREHE-WFKQDLPK 276
Score = 60.6 bits (147), Expect = 2e-09
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV++ P+ D+WS+GV+ Y LL G PF P + + + L
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ---YL 239
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
L + + P KR T+++ E+ W
Sbjct: 240 NPSVISLLKHMLQVDPMKRATIKDIREHEWF 270
Score = 50.9 bits (122), Expect = 2e-06
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + + E + +Q+LSG+DY HR + H L P ++L+ +
Sbjct: 99 SGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM--NAK 156
Query: 523 LTDFGLSRRITSFGKLN 539
+ DFGLS ++ L
Sbjct: 157 IADFGLSNMMSDGEFLR 173
Score = 33.2 bits (76), Expect = 0.66
Identities = 14/57 (24%), Positives = 20/57 (35%)
Query: 50 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVE 106
K + Y GD LG G G V +G A K++ + S V +
Sbjct: 8 KHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR 64
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 95.5 bits (238), Expect = 2e-21
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRN 241
D Y+ + +G G T +V A A K + K E+ M+Q H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY--------TEYDIAHYIRQLLSGL 293
+V + S+ KD ++ +L GG +L + E IA +R++L GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
+Y+H+ H + G++L+ G + + DFG+S + + G +
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDG--SVQIADFGVSAFLATGGDIT 178
Score = 49.3 bits (118), Expect = 4e-06
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 25/115 (21%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ----------- 996
A + VL+GL+YLH G H +++ N+++ V++ D G
Sbjct: 124 ATILREVLEGLEYLHKNGQIHRDVKAGNILLGE--DGSVQIADFGVSAFLATGGDITRNK 181
Query: 997 -RVTKLGTLIHPINTPNPEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPF 1049
R T +GT P + APEV+ + + + D+WS G+ A L +GA+P+
Sbjct: 182 VRKTFVGT---------PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
Score = 41.9 bits (99), Expect = 9e-04
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 28/157 (17%)
Query: 571 LAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKL- 629
+++D L +S+ D Y+ I G +VV A E VA K
Sbjct: 1 MSEDSSALPWSI-----------NRDDYELQEVIGSGATAVVQAAYCAPKKE-KVAIKRI 48
Query: 630 -FEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQG---ADVL 685
E ++ ++ E + H I S ++ + + VM+ L G D++
Sbjct: 49 NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF---VVKDELWL-VMKLLSGGSVLDII 104
Query: 686 SYLSSRHEY-----TEQNVATIISQAWE--HYLKKNR 715
++ ++ E+ E +ATI+ + E YL KN
Sbjct: 105 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Score = 41.2 bits (97), Expect = 0.002
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 537
E IA +R++L GL+Y+H+ H + G++L+ G + + DFG+S + + G
Sbjct: 119 DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG--SVQIADFGVSAFLATGGD 176
Query: 538 LN 539
+
Sbjct: 177 IT 178
Score = 38.8 bits (91), Expect = 0.008
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
D Y+ + +G G T +V A A K +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI 48
Score = 32.3 bits (74), Expect = 1.1
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 22/98 (22%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRG-----------QSEP---ETRQNV 1188
APEV+ + + + D+WS G+ A L +GA+P+ Q++P ET
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 253
Query: 1189 NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEE 1226
+ ++ F++ + L ++ P KRPT E
Sbjct: 254 KEMLKKYGKSFRK-------MISLCLQKDPEKRPTAAE 284
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 95.8 bits (239), Expect = 3e-21
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCHRN 241
Y + LG G G V A + + A K + K + + E+ + L H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+++L+D T ++ E AGG EL + + TE + + +Q++ ++Y HR I
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGG-ELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
H L P +LL+ ++ + DFGLS +T L
Sbjct: 130 VHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLK 165
Score = 68.5 bits (168), Expect = 3e-12
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP---INTP 1011
++ ++Y H + H +++P+N+++ ++ VK+ D G L ++ + T
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDD--NLNVKIADFG-------LSNIMTDGNFLKTS 167
Query: 1012 --NPEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
+P +AAPEV+ + P+ DVWS G++ YV+L G PF + P + VN Y
Sbjct: 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM 227
Query: 1069 EYLFKELTQEATRFL--MLIFKHEVD---WITLANNIDHEFWHVKDLKR 1112
L+ A + M+ D IT+ W +L
Sbjct: 228 P---DFLSPGAQSLIRRMI----VADPMQRITIQEIRRDP-WFNVNLPD 268
Score = 60.8 bits (148), Expect = 9e-10
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEV+ + P+ DVWS G++ YV+L G PF + P + VN Y L
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP---DFL 231
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ A + + P +R T++E + W
Sbjct: 232 SPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
Score = 52.3 bits (126), Expect = 4e-07
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
GGEL + + TE + + +Q++ ++Y HR I H L P +LL+ ++ +
Sbjct: 92 GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL--NVKI 149
Query: 524 TDFGLSRRITSFGKLN 539
DFGLS +T L
Sbjct: 150 ADFGLSNIMTDGNFLK 165
Score = 32.6 bits (75), Expect = 0.70
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS----HDTLHQVNTEFDNLRSLRH 652
Y + G F V K A T+ VA K D +V E L+ LRH
Sbjct: 10 PYIIRETLGEGSFGKV-KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 653 ERIASLLEAYKPSTTASNIAVLVME 677
I L + T ++I V+V+E
Sbjct: 69 PHIIKLYDVIT---TPTDI-VMVIE 89
Score = 31.9 bits (73), Expect = 1.6
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVE 106
Y + LG G G V A + + A K ++ + + + VE
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVE 57
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 94.7 bits (236), Expect = 3e-21
Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 18/168 (10%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRN 241
++ LGRG G+V+ A + NYA K + + E+ + +L H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 242 LVRLHDSYETKDSFT------------IISELAGGGELLHSLTRQSYYTEYD---IAHYI 286
+VR +++ K++ I +L L + + E + H
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
Q+ ++++H + H L P ++ + + DFGL +
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQ 170
Score = 55.8 bits (135), Expect = 3e-08
Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 23/150 (15%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC-------------TQRVTKL 1001
+ + +++LH +GL H +++P N+ VK+ D G +
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFT--MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQN 1060
+ T + +PE + + D++S G++ + LL PF Q E T +
Sbjct: 185 ARHTGQVGTKL--YMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTD 239
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLIFKHE 1090
V +F LF + + +
Sbjct: 240 VR--NLKFPPLFTQKYPCEYVMVQDMLSPS 267
Score = 54.7 bits (132), Expect = 7e-08
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFVRYRFEYLFKEL 1202
+PE + + D++S G++ + LL PF Q E T +V +F LF +
Sbjct: 198 SPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTDVR--NLKFPPLFTQK 252
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL----VPSEYMIKKRER 1245
+ + +P +RP EN P + ++++R R
Sbjct: 253 YPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGKTVLRQRSR 299
Score = 47.3 bits (113), Expect = 2e-05
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 5/75 (6%)
Query: 463 PGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
L + + E + H Q+ ++++H + H L P ++
Sbjct: 98 RKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-- 155
Query: 520 HLLLTDFGLSRRITS 534
+ + DFGL +
Sbjct: 156 VVKVGDFGLVTAMDQ 170
Score = 36.2 bits (84), Expect = 0.058
Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 11/117 (9%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLH--QVNTEFDNLRSLRHE 653
++ I + RG F VV +A K + A K + L +V E L L H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKV-DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 654 RIASLLEAY------KPSTTASNIAVL--VMEKLQGADVLSYLSSRHEYTEQNVATI 702
I A+ + +S L M+ + ++ +++ R E+ +
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Score = 33.1 bits (76), Expect = 0.50
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
++ LGRG G+V+ A + NYA K +
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI 38
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 93.1 bits (232), Expect = 1e-20
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 31/173 (17%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-----------------------TGKGN 221
Y DE+G+G G+V A + YA KV+ G
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 222 QYKSLF---KNELDIMNQLCHRNLVRLHDSYE--TKDSFTIISELAGGGELLHSLTRQSY 276
Q + E+ I+ +L H N+V+L + + +D ++ EL G ++ T +
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134
Query: 277 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+E Y + L+ G++Y+H I H + P +LLV G H+ + DFG+S
Sbjct: 135 -SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVS 184
Score = 71.1 bits (175), Expect = 2e-13
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH-PINTPNP 1013
++ G++YLH++ + H +I+P N+++ +K+ D G + L+ + TP
Sbjct: 146 LIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVSNEFKGSDALLSNTVGTPA- 202
Query: 1014 EFAAPEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
F APE L+E DVW+ GV Y + G PF + + F
Sbjct: 203 -FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD 261
Query: 1071 LFKELTQEATRFL--ML 1085
++ ++ + ML
Sbjct: 262 -QPDIAEDLKDLITRML 277
Score = 58.4 bits (142), Expect = 4e-09
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 4/93 (4%)
Query: 1144 APEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200
APE L+E DVW+ GV Y + G PF + + F
Sbjct: 205 APESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD-QP 263
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
++ ++ + + + P R V E + W+
Sbjct: 264 DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
Score = 51.1 bits (123), Expect = 1e-06
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
G ++ T + +E Y + L+ G++Y+H I H + P +LLV G H+
Sbjct: 121 NQGPVMEVPTLKPL-SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIK 177
Query: 523 LTDFGLS 529
+ DFG+S
Sbjct: 178 IADFGVS 184
Score = 38.8 bits (91), Expect = 0.010
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
Y DE+G+G G+V A + YA KV+
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVL 46
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 91.6 bits (228), Expect = 6e-20
Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 10/170 (5%)
Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLF 227
A +P+ Y G LG G G VY + S A K + + + + L
Sbjct: 29 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 88
Query: 228 KN-----ELDIMNQLCHR--NLVRLHDSYETKDSFTIISELA-GGGELLHSLTRQSYYTE 279
E+ ++ ++ ++RL D +E DSF +I E +L +T + E
Sbjct: 89 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 148
Query: 280 YDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ Q+L + + H + H + ++L+ G L L DFG
Sbjct: 149 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSG 197
Score = 72.4 bits (178), Expect = 1e-13
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
VL+ +++ H G+ H +I+ +N+++ + ++KLID G + K T
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSG-ALLKDTVYTDFDGTRV-- 213
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
++ PE + VWS G+L Y ++ G PF E
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 254
Score = 59.7 bits (145), Expect = 2e-09
Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
PE + VWS G+L Y ++ G PF E + + F +
Sbjct: 216 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---RV 266
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ E + P RPT EE + W+
Sbjct: 267 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
Score = 44.6 bits (106), Expect = 1e-04
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
P +L +T + E + Q+L + + H + H + ++L+ G L
Sbjct: 132 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LK 190
Query: 523 LTDFGLS 529
L DFG
Sbjct: 191 LIDFGSG 197
Score = 41.6 bits (98), Expect = 0.001
Identities = 24/137 (17%), Positives = 48/137 (35%), Gaps = 15/137 (10%)
Query: 565 AGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENL 624
+G P + P + EP +YQ + G F V + + +
Sbjct: 12 SGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFG-SVYSGIRVSDNLP 70
Query: 625 VAAKLFEYSH-------DTLHQVNTEFDNLRSLRHER--IASLLEAYKPSTTASNIAVLV 675
VA K E +V E L+ + + LL+ ++ + VL+
Sbjct: 71 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE---RPDSF-VLI 126
Query: 676 MEKLQGA-DVLSYLSSR 691
+E+ + D+ +++ R
Sbjct: 127 LERPEPVQDLFDFITER 143
Score = 36.2 bits (84), Expect = 0.067
Identities = 13/48 (27%), Positives = 17/48 (35%)
Query: 44 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
A +P+ Y G LG G G VY + S A K +
Sbjct: 29 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV 76
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 90.5 bits (225), Expect = 1e-19
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 166 RTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS 225
R + + +P + +D ++LG G G VY A+ + +G+ A K +
Sbjct: 13 RQLKKLDEDSLTKQP-EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQ 69
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAH 284
E+ IM Q ++V+ + SY I+ E G G + + R TE +IA
Sbjct: 70 EIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT 129
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
++ L GL+Y+H + H + G++L+ G H L DFG++ ++T
Sbjct: 130 ILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLTD 177
Score = 56.6 bits (137), Expect = 2e-08
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 19/109 (17%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
A + S L GL+YLH+ H +I+ N+++ KL D G Q R T
Sbjct: 128 ATILQSTLKGLEYLHFMRKIHRDIKAGNILLN--TEGHAKLADFGVAGQLTDTMAKRNTV 185
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
+GT P + APEV+ E D+WS G+ A + G P+
Sbjct: 186 IGT---------PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
Score = 46.2 bits (110), Expect = 4e-05
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 13/131 (9%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRS 649
T+ P + + + ++ G + V KA K T +VA K D L ++ E ++
Sbjct: 23 LTKQPEEVFDVLEKLGEGSYGSVYKAIHKE-TGQIVAIKQVPVESD-LQEIIKEISIMQQ 80
Query: 650 LRHERIASLLEAYKPSTTASNIAVLVMEKLQG---ADVLSYLSSRHEYTEQNVATIISQA 706
+ +Y +T +VME +D++ + TE +ATI+
Sbjct: 81 CDSPHVVKYYGSYFKNTD----LWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQST 134
Query: 707 WE--HYLKKNR 715
+ YL R
Sbjct: 135 LKGLEYLHFMR 145
Score = 41.2 bits (97), Expect = 0.002
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
TE +IA ++ L GL+Y+H + H + G++L+ G H L DFG++ ++T
Sbjct: 123 TEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLTD 177
Score = 36.2 bits (84), Expect = 0.056
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 41 RTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
R + + +P + +D ++LG G G VY A+ + +G+ A K +
Sbjct: 13 RQLKKLDEDSLTKQP-EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV 62
Score = 30.0 bits (68), Expect = 5.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1176
APEV+ E D+WS G+ A + G P+
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 90.4 bits (225), Expect = 1e-19
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 8/169 (4%)
Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFK 228
+ R K D + FG LG G V A E ++ R YA K++ K N+ +
Sbjct: 21 PPQPRKKRPED-FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV-T 78
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
E D+M++L H V+L+ +++ + A GELL + + + E Y +
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
++S L+Y+H I H L P ++L+ H+ +TDFG ++ ++ K
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESK 185
Score = 56.9 bits (138), Expect = 1e-08
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 32/170 (18%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN-- 1012
++ L+YLH +G+ H +++P+N+++ + +++ D G K+ + N
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFG----TAKVLSPESKQARANSF 192
Query: 1013 ---PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
++ +PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
Query: 1069 EYLFKE--------LTQEATRFL--------MLIFKH----EVDWITLAN 1098
E F + L +AT+ L + H V W L
Sbjct: 253 EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ 302
Score = 54.9 bits (133), Expect = 5e-08
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GELL + + + E Y +++S L+Y+H I H L P ++L+ H+
Sbjct: 113 KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQ 170
Query: 523 LTDFGLSRRITSFGK 537
+TDFG ++ ++ K
Sbjct: 171 ITDFGTAKVLSPESK 185
Score = 48.0 bits (115), Expect = 1e-05
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
+PE+L E+ +D+W+ G + Y L++G PFR +E Q + + Y F ++
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP---EKFF 256
Query: 1204 QEATRFLMLIFKRAPGKR 1221
+A + + KR
Sbjct: 257 PKARDLVEKLLVLDATKR 274
Score = 33.0 bits (76), Expect = 0.54
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 48 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ R K D + FG LG G V A E ++ R YA K++
Sbjct: 21 PPQPRKKRPED-FKFGKILGEGSFSTVVLARELATSREYAIKIL 63
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 89.8 bits (223), Expect = 3e-19
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 9/162 (5%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK---SLFKNELDIMNQLC 238
+ E+G G G VY A + + A K M+ G Q E+ + +L
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H N ++ Y + + ++ E G + E +IA L GL Y+H
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFG----LSRRITSFG 336
++ H + G++L++ PG + L DFG ++ + G
Sbjct: 173 HNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAPANSFVG 212
Score = 49.7 bits (119), Expect = 3e-06
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 18/108 (16%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG----CTQRVTKLGTL 1004
A L GL YLH + H +++ N++++ VKL D G + +GT
Sbjct: 157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPANSFVGT- 213
Query: 1005 IHPINTPNPEFAAPEVLA---EEPIFPQTDVWSAGVLAYVLLSGASPF 1049
P + APEV+ E + DVWS G+ L P
Sbjct: 214 --------PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
Score = 47.8 bits (114), Expect = 1e-05
Identities = 32/168 (19%), Positives = 53/168 (31%), Gaps = 11/168 (6%)
Query: 554 PAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVV 613
+ + + G + + D + + P + + EI G F V
Sbjct: 12 YDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVY 71
Query: 614 KAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTAS 669
A + +VA K Y S++ + E L+ LRH Y T
Sbjct: 72 FARDVR-NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT-- 128
Query: 670 NIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HYLKKNR 715
A LVME G+ + E +A + A + YL +
Sbjct: 129 --AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 174
Score = 38.9 bits (91), Expect = 0.008
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG----LSRRIT 533
E +IA L GL Y+H ++ H + G++L++ PG + L DFG ++ +
Sbjct: 152 QEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAPANS 209
Query: 534 SFG 536
G
Sbjct: 210 FVG 212
Score = 36.2 bits (84), Expect = 0.058
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 57 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ E+G G G VY A + + A K M
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKM 87
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 88.9 bits (221), Expect = 3e-19
Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 12/172 (6%)
Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK------VMTGKGNQ 222
+ Y G LG+G G V+ + A K V+
Sbjct: 17 PTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLS 76
Query: 223 YKSLFKNELDIMNQL----CHRNLVRLHDSYETKDSFTIISELAG-GGELLHSLTRQSYY 277
E+ ++ ++ H ++RL D +ET++ F ++ E +L +T +
Sbjct: 77 DSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPL 136
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
E + Q+++ + + H + H + ++L+ G L DFG
Sbjct: 137 GEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC-AKLIDFGSG 187
Score = 71.2 bits (175), Expect = 3e-13
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
V+ +Q+ H RG+ H +I+ +N+++ +R KLID G + T
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILI-DLRRGCAKLIDFGSG-ALLHDEPYTDFDGTRV-- 203
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
++ PE ++ VWS G+L Y ++ G PF E
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE 244
Score = 58.9 bits (143), Expect = 3e-09
Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 10/91 (10%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
PE ++ VWS G+L Y ++ G PF E + F +
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA---HV 256
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+ + + P RP++EE + W+
Sbjct: 257 SPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287
Score = 45.0 bits (107), Expect = 8e-05
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
P +L +T + E + Q+++ + + H + H + ++L+ G
Sbjct: 122 PAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC-AK 180
Query: 523 LTDFGLS 529
L DFG
Sbjct: 181 LIDFGSG 187
Score = 35.7 bits (83), Expect = 0.081
Identities = 10/48 (20%), Positives = 15/48 (31%)
Query: 44 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ Y G LG+G G V+ + A KV+
Sbjct: 17 PTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVI 64
Score = 33.0 bits (76), Expect = 0.50
Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 17/132 (12%)
Query: 572 AQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK--- 628
Q PP + P E +Y+ + +G F V A + VA K
Sbjct: 7 LQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFG-TVFAGHRLTDRLQVAIKVIP 65
Query: 629 ----LFEYSHDTLHQVNTEFDNLRSLR----HERIASLLEAYKPSTTASNIAVLVME-KL 679
L E L + H + LL+ ++ T +LV+E L
Sbjct: 66 RNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE---TQEGF-MLVLERPL 121
Query: 680 QGADVLSYLSSR 691
D+ Y++ +
Sbjct: 122 PAQDLFDYITEK 133
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 89.0 bits (221), Expect = 5e-19
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HR 240
++ + +G G G VY +G+ A KVM G++ + + K E++++ + HR
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI-KQEINMLKKYSHHR 81
Query: 241 NLVRLHDSY------ETKDSFTIISELAGGGEL--LHSLTRQSYYTEYDIAHYIRQLLSG 292
N+ + ++ D ++ E G G + L T+ + E IA+ R++L G
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
L ++H+ + H + ++L+ + L DFG+S ++
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDR 181
Score = 52.0 bits (125), Expect = 7e-07
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 24/114 (21%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
AY +L GL +LH + H +I+ NV++ + +VKL+D G Q R T
Sbjct: 132 AYICREILRGLSHLHQHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTF 189
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPF 1049
+GT P + APEV+A + T D+WS G+ A + GA P
Sbjct: 190 IGT---------PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
Score = 48.5 bits (116), Expect = 7e-06
Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 13/154 (8%)
Query: 570 TLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKL 629
++A D P + D + P ++ + + G + V K T L A K+
Sbjct: 1 SMASDSPARSLDEIDLS---ALRDPAGIFELVELVGNGTYGQVYKGRHVK-TGQLAAIKV 56
Query: 630 FEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPSTTASNIAVL--VMEKLQG---AD 683
+ + D ++ E + L+ H IA+ A+ L VME D
Sbjct: 57 MDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116
Query: 684 VLSYLSSRHEYTEQNVATIISQAWE--HYLKKNR 715
++ E+ +A I + +L +++
Sbjct: 117 LIKNTKGN-TLKEEWIAYICREILRGLSHLHQHK 149
Score = 40.4 bits (95), Expect = 0.003
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
E IA+ R++L GL ++H+ + H + ++L+ + L DFG+S ++
Sbjct: 127 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDR 181
Score = 37.4 bits (87), Expect = 0.030
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 57 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
++ + +G G G VY +G+ A KVM
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM 57
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 90.0 bits (223), Expect = 5e-19
Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 8/181 (4%)
Query: 163 YSYRTYARGRQVKTRTKPITDAYDFGDELGRGVT--GIVYHAVERSSGRNYAAKVM--TG 218
+ + Q + P Y+ +G+G V A + +G + +
Sbjct: 5 HHHHMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA 64
Query: 219 KGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYT 278
N+ + + EL + H N+V ++ + +++ G +
Sbjct: 65 CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG 124
Query: 279 --EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
E IA+ ++ +L LDY+H + H + +L++ G + L+ + + S G
Sbjct: 125 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGLRSNLSMISHG 182
Query: 337 K 337
+
Sbjct: 183 Q 183
Score = 57.2 bits (138), Expect = 2e-08
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 14/111 (12%)
Query: 949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
AY + VL L Y+H G H +++ +++++ +V L L +
Sbjct: 131 AYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNLSMISHGQRQRVV 188
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPF 1049
+ + + +PEVL + ++D++S G+ A L +G PF
Sbjct: 189 HDFPKYSVKVLP--WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 237
Score = 39.5 bits (92), Expect = 0.006
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 537
E IA+ ++ +L LDY+H + H + +L++ G + L+ + + S G+
Sbjct: 126 NELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGLRSNLSMISHGQ 183
Score = 34.5 bits (79), Expect = 0.25
Identities = 8/56 (14%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Query: 38 YSYRTYARGRQVKTRTKPITDAYDFGDELGRGVT--GIVYHAVERSSGRNYAAKVM 91
+ + Q + P Y+ +G+G V A + +G + +
Sbjct: 5 HHHHMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRI 60
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 87.2 bits (216), Expect = 3e-18
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHR 240
D ++ ELG G G+V+ + SG A K++ + + + EL ++++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSP 91
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RL 299
+V + ++ + +I E GG L L + E + ++ GL Y+ +
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
I H + P ++LV G + L DFG+S ++
Sbjct: 152 KIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLID 184
Score = 52.9 bits (127), Expect = 4e-07
Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 18/121 (14%)
Query: 949 AYCVTSVLDGLQYLHWRG-LCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVTKL 1001
+V+ GL YL + + H +++P N+++ S ++KL D G + + +
Sbjct: 134 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFV 191
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
GT + +PE L Q+D+WS G+ + G P E
Sbjct: 192 GT---------RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 242
Query: 1062 N 1062
Sbjct: 243 G 243
Score = 44.8 bits (106), Expect = 1e-04
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLL 522
GG L L + E + ++ GL Y+ + I H + P ++LV G +
Sbjct: 115 GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 172
Query: 523 LTDFGLSRRITS 534
L DFG+S ++
Sbjct: 173 LCDFGVSGQLID 184
Score = 32.9 bits (75), Expect = 0.60
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 92
D ++ ELG G G+V+ + SG A K++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH 67
Score = 30.6 bits (69), Expect = 3.9
Identities = 11/46 (23%), Positives = 16/46 (34%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1189
+PE L Q+D+WS G+ + G P E
Sbjct: 198 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 243
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 86.3 bits (214), Expect = 4e-18
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 15/159 (9%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLV 243
L G VY A + SGR YA K + + E+ M +L H N+V
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 244 RLHDSYETKDS--------FTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
+ + F +++EL G E L + + + + Q +
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 294 DYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
+MHR I H L +LL+++ G + L DFG +
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLSNQG--TIKLCDFGSAT 186
Score = 55.1 bits (133), Expect = 6e-08
Identities = 22/117 (18%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 955 VLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLG----------CTQRVTKLG 1002
+Q++H + + H +++ +N+++++ ++ KL D G + +
Sbjct: 145 TCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTI--KLCDFGSATTISHYPDYSWSAQRRA 202
Query: 1003 TLIHPIN---TPNPEFAAPEVL---AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
+ I TP + PE++ + PI + D+W+ G + Y+L PF +
Sbjct: 203 LVEEEITRNTTPM--YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257
Score = 46.7 bits (111), Expect = 4e-05
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 1144 APEVL---AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200
PE++ + PI + D+W+ G + Y+L PF ++ + +Y
Sbjct: 218 TPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK----LRIVNGKYSIPP-HD 272
Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEE 1226
+ + + P +R ++ E
Sbjct: 273 TQYTVFHSLIRAMLQVNPEERLSIAE 298
Score = 44.0 bits (104), Expect = 2e-04
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 464 GGELLHSLTR---QSYYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGG 518
G+L+ L + + + + Q + +MHR I H L +LL+++ G
Sbjct: 117 KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG- 175
Query: 519 RHLLLTDFGLSR 530
+ L DFG +
Sbjct: 176 -TIKLCDFGSAT 186
Score = 35.9 bits (83), Expect = 0.076
Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 9/117 (7%)
Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAK-LFEYSHDTLHQVNTEFDNLRSLR-HER 654
+ + + G F+ V A+ + A K L + + E ++ L H
Sbjct: 29 RLRVRRVLAEGGFAFV-YEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPN 87
Query: 655 IASLLEAY----KPSTTASNIAVLVMEKLQG--ADVLSYLSSRHEYTEQNVATIISQ 705
I A + S T +L+ E +G + L + SR + V I Q
Sbjct: 88 IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQ 144
Score = 29.3 bits (66), Expect = 7.8
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK 94
L G VY A + SGR YA K +
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN 64
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 87.0 bits (215), Expect = 4e-18
Identities = 25/200 (12%), Positives = 52/200 (26%), Gaps = 37/200 (18%)
Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKN 229
V + + L G +V+ + ++A KV T +S
Sbjct: 52 TVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHE 111
Query: 230 ELDIMNQLCHRN------------------------LVRLHDSYETKD--SFTIISELAG 263
+L + +L + ++ ++ A
Sbjct: 112 ATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS 171
Query: 264 G-----GELLHSLTRQSYYTEYDIAHYI-RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG 317
L + H + QL+ + + H TP +L + G
Sbjct: 172 VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDG 231
Query: 318 GRHLLLTDFGLSRRITSFGK 337
L+L D ++ + G
Sbjct: 232 --RLMLGDVSALWKVGTRGP 249
Score = 76.2 bits (187), Expect = 1e-14
Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 16/195 (8%)
Query: 864 LRRLRHEIGTRPEAHVEADALIESRRD-GHAPFFREKPITIPVVIGDKLEMKCLAVGEPK 922
RL E ++ PF + P + + L + A + +
Sbjct: 116 AARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLE 175
Query: 923 PVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTS-VLDGLQYLHWRGLCHLNIEPDNVVMAS 981
+ + +T+ ++ L +GL H + PDN+ +
Sbjct: 176 LLFSTLDF------VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM- 228
Query: 982 VRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF--PQTDVWSAGVLA 1039
++ L D+ + K+GT + P +A E L + W G+
Sbjct: 229 -PDGRLMLGDVS---ALWKVGTRGPASSVP-VTYAPREFLNASTATFTHALNAWQLGLSI 283
Query: 1040 YVLLSGASPFRGQSE 1054
Y + PF +
Sbjct: 284 YRVWCLFLPFGLVTP 298
Score = 54.7 bits (131), Expect = 1e-07
Identities = 14/110 (12%), Positives = 24/110 (21%), Gaps = 8/110 (7%)
Query: 1144 APEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQSEP---ETRQNVNFVRYRFEYL 1198
E L + W G+ Y + PF + ++ V
Sbjct: 259 PREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLA 318
Query: 1199 F---KELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRER 1245
F L + +R E E + + I
Sbjct: 319 FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSLS 368
Score = 52.4 bits (125), Expect = 6e-07
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
L + + QL+ + + H TP +L + G L+L
Sbjct: 178 FSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDG--RLML 235
Query: 524 TDFGLSRRITSFGK 537
D ++ + G
Sbjct: 236 GDVSALWKVGTRGP 249
Score = 47.0 bits (111), Expect = 3e-05
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 48 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSV 101
V + + L G +V+ + ++A KV T S S
Sbjct: 52 TVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSE 105
Score = 40.4 bits (94), Expect = 0.004
Identities = 13/123 (10%), Positives = 31/123 (25%), Gaps = 12/123 (9%)
Query: 549 KVAVTPAMKHLQAITEAGHTPTLAQDPPPLNYSVE-----DSPIEWSTE--PPTDKYQFI 601
+ +K + + L + + ++ + K + +
Sbjct: 8 DSFMRDLLKREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLV 67
Query: 602 SEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH----DTLHQVNTEFDNLRSLRHERIAS 657
+ G SVV + A K+F L +++ L E
Sbjct: 68 EPLRVGDRSVVFLVRDVE-RLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEE 126
Query: 658 LLE 660
+
Sbjct: 127 ARD 129
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 84.3 bits (208), Expect = 3e-17
Identities = 26/199 (13%), Positives = 55/199 (27%), Gaps = 38/199 (19%)
Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---------------- 216
+V++ G LG+ A ++ +G ++ V
Sbjct: 63 RVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKE 122
Query: 217 ------------TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII------ 258
K + F D++ + ++R+ +
Sbjct: 123 EVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM 182
Query: 259 --SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 316
+ G LL + + Q++ L +H + H L P D+++
Sbjct: 183 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR 242
Query: 317 GGRHLLLTDFGLSRRITSF 335
G + LT F R +
Sbjct: 243 G--GVFLTGFEHLVRDGAR 259
Score = 77.7 bits (191), Expect = 4e-15
Identities = 32/227 (14%), Positives = 66/227 (29%), Gaps = 25/227 (11%)
Query: 853 INKYGAADTYTLRRLRHEIG-TRPEAHVEADALIESRRDGHAPFFREKPITIPVVI---- 907
+ +++++ E+ R ++ + PF K +I
Sbjct: 106 PYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL 165
Query: 908 -GDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTS-VLDGLQYLHWR 965
+ + P+ G L + H +T V+ L LH
Sbjct: 166 DERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 225
Query: 966 GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP 1025
GL H + P ++V+ + V L + + G + + F PE+ A
Sbjct: 226 GLVHTYLRPVDIVLD--QRGGVFLTGFE---HLVRDGARVVSSVSR--GFEPPELEARRA 278
Query: 1026 IF-----------PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
D W+ G++ Y + P + + +
Sbjct: 279 TISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI 325
Score = 56.6 bits (136), Expect = 3e-08
Identities = 13/101 (12%), Positives = 25/101 (24%), Gaps = 18/101 (17%)
Query: 1144 APEVLAEEPIF-----------PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1192
PE+ A D W+ G++ Y + P + + +
Sbjct: 270 PPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI---- 325
Query: 1193 YRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
+R + Q L + R + E
Sbjct: 326 FRSCK---NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 363
Score = 53.9 bits (129), Expect = 2e-07
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
G LL + + Q++ L +H + H L P D+++ G + L
Sbjct: 190 GEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG--GVFL 247
Query: 524 TDFGLSRRITSF 535
T F R +
Sbjct: 248 TGFEHLVRDGAR 259
Score = 43.8 bits (103), Expect = 3e-04
Identities = 7/45 (15%), Positives = 16/45 (35%)
Query: 48 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 92
+V++ G LG+ A ++ +G ++ V
Sbjct: 63 RVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPY 107
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 79.7 bits (197), Expect = 4e-16
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
+ + +GRG G+V A R ++ A K + + + F EL ++++ H N+V+L
Sbjct: 11 EVEEVVGRGAFGVVCKAKWR--AKDVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKL 66
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDYMHRL--- 299
+ + + ++ E A GG L + L Y AH + L G+ Y+H +
Sbjct: 67 YGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
++ H L P +LL+ GG L + DFG + I +
Sbjct: 125 ALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQT 158
Score = 48.9 bits (117), Expect = 5e-06
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 958 GLQYLH---WRGLCHLNIEPDNVVMASVRSVQVKLIDLG-----CTQRVTKLGTLIHPIN 1009
G+ YLH + L H +++P N+++ + +V +K+ D G T G+
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTV-LKICDFGTACDIQTHMTNNKGS------ 166
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
+ APEV + DV+S G++ + +++ PF P
Sbjct: 167 ---AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
Score = 39.6 bits (93), Expect = 0.004
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDYMHRL---SIAHLGLTPGDLLVAHP 516
GG L + L Y AH + L G+ Y+H + ++ H L P +LL+
Sbjct: 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA- 140
Query: 517 GGRHLLLTDFGLSRRITS 534
GG L + DFG + I +
Sbjct: 141 GGTVLKICDFGTACDIQT 158
Score = 36.5 bits (85), Expect = 0.046
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1183
APEV + DV+S G++ + +++ PF P
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 81.9 bits (202), Expect = 7e-16
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNELDIMNQLCHRNLVR 244
+GRG G VY + +G+ YA K + +G + L +++ +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ ++ T D + I +L GG+L + L++ ++E D+ Y +++ GL++MH + +
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
L P ++L+ G H+ ++D GL+
Sbjct: 317 DLKPANILLDEHG--HVRISDLGLACDF 342
Score = 56.0 bits (135), Expect = 7e-08
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV------TKLGTLIHPI 1008
++ GL+++H R + + +++P N+++ V++ DLG +GT
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKKPHASVGT----- 353
Query: 1009 NTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
+ APEVL + + + D +S G + + LL G SPFR + +
Sbjct: 354 ----HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 401
Score = 51.0 bits (122), Expect = 2e-06
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG+L + L++ ++E D+ Y +++ GL++MH + + L P ++L+ G H+
Sbjct: 275 NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVR 332
Query: 523 LTDFGLSRRI 532
++D GL+
Sbjct: 333 ISDLGLACDF 342
Score = 47.2 bits (112), Expect = 4e-05
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 1144 APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APEVL + + + D +S G + + LL G SPFR + + L
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 1203 TQEATRFLMLIFKRAPGKR 1221
+ E L + +R +R
Sbjct: 418 SPELRSLLEGLLQRDVNRR 436
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 82.2 bits (202), Expect = 8e-16
Identities = 101/698 (14%), Positives = 211/698 (30%), Gaps = 192/698 (27%)
Query: 150 HSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGD--ELGRGV--TGIVYHAVER 205
H + E E++Y Y+ + D +D D ++ + + + H +
Sbjct: 3 HHHHMDFETGEHQYQYKDI-----LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS 57
Query: 206 SSGRNYAAKVMT---GKG-NQYKSLFKNELD-----IMNQLCHRNLVRLHDSYETKDSFT 256
+ ++ K + + L +M+ + S T+
Sbjct: 58 KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP---SMMTRMYIE 114
Query: 257 IISELAGGGELL--HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA 314
L ++ ++++R Y + +RQ L L L P ++
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLK------LRQAL-------------LELRPAKNVLI 155
Query: 315 H-PGGRHLLLTDFGLSRRITSFGKLNPLEYDV-RYVRQALRHP----WLNFADRKPTEDT 368
G GK + DV + + WLN + ++
Sbjct: 156 DGVLG----------------SGK-TWVALDVCLSYKVQCKMDFKIFWLNLKNC----NS 194
Query: 369 PKLNTDALRN-YYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDK 427
P+ + L+ Y + +W + + R ++S R+ +P +
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR-IHSIQAELRRL-------LKSKPYENC 246
Query: 428 VLVSRDLRDVKTWED-NVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYI 486
+LV ++++ K W N+ K LL TR T++ A
Sbjct: 247 LLVLLNVQNAKAWNAFNL-----SCKI-------------LL--TTRFKQVTDFLSAATT 286
Query: 487 RQL-----LSGL--DYMHRLSIAHLGLTPGDL----LVAHPGGRHLLLTDFGLSRRITSF 535
+ L D + L + +L P DL L +P L+ S R
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----RRLSIIAESIRD--- 339
Query: 536 GKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNY---SV--EDSPIE-- 588
L + +K + + + P + + SV + I
Sbjct: 340 -GLATWDN----WKHVNCDKLTTIIESSLNVLEPAEYRK----MFDRLSVFPPSAHIPTI 390
Query: 589 -----WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTE 643
W +D ++++H K+S+V EK E+ + ++ +
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLH--KYSLV----EKQPKESTI------SIPSIYLELKVK 438
Query: 644 FDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGAD--VLSYLSSRHEYTEQNVAT 701
+N +L H I ++ Y T + ++ D S++ H ++
Sbjct: 439 LENEYAL-HRSI---VDHYNIPKTFDSDDLI----PPYLDQYFYSHI-GHHLKNIEH--- 486
Query: 702 IISQAWE---------HYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWED 752
+ +L++ K R T NT L+ +K ++
Sbjct: 487 --PERMTLFRMVFLDFRFLEQ----------KIRHDSTAWNASGSILNT--LQQLKFYKP 532
Query: 753 NVPNRGPAID---YDL--NVVKSESHYQNGPDTYLLQL 785
+ + P + + + K E + T LL++
Sbjct: 533 YICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570
Score = 66.4 bits (161), Expect = 5e-11
Identities = 76/485 (15%), Positives = 147/485 (30%), Gaps = 116/485 (23%)
Query: 598 YQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIAS 657
+F+ E+ R + ++ + + + +++ D L+ N F R +
Sbjct: 80 QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139
Query: 658 LLEAYKPSTTASNIAV----------LVMEKLQGADVLS-------YLSSRHEYTEQNVA 700
L +A A N+ + + ++ V +L+ ++ + + V
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199
Query: 701 TIISQAWEHYLKKNREQIADTADKSRIPRTIREYRE------QSANTAN----LRDVKTW 750
++ Q + + N +D + S I I + +S N L +V
Sbjct: 200 EML-QKLLYQIDPNWTSRSDHS--SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV--Q 254
Query: 751 EDNVPNRGPAIDY---------DLNVVKSESHYQNGPDTYLLQLRDVDFPVRLRE----Y 797
N A + V S T + L + E
Sbjct: 255 NAKAWN---AFNLSCKILLTTRFKQVTDFLS----AATTTHISLDHHSMTLTPDEVKSLL 307
Query: 798 IKVASTRP-DL-RLSTGFNCLDTSENGHLDWKAPVIRER-RRFTDVMD--EEIDDERRNR 852
+K RP DL R N S +I E R D + ++ ++
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLS----------IIAESIRDGLATWDNWKHVNCDKLTT 357
Query: 853 INK--YGAADTYTLRRLRHEIGTRPE-AHVEADALIESRRDGHAPFFREKPITIPVVIGD 909
I + + R++ + P AH+ L + + + + +V+ +
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL--------SLIWFDVIKSDVMVVVN 409
Query: 910 KLEMKCLAVGEPKPVIQWFKLGTSTL--CYLPIVIPTT-----HK---DAY--------- 950
KL L V + K T ++ YL + + H+ D Y
Sbjct: 410 KLHKYSL-------VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 951 -CVTSVLDGLQYLHWRGLCHL-NIEPD------NVVMASVRSVQVKLIDLG--CTQRVTK 1000
+ LD Y + HL NIE +V R ++ K+ +
Sbjct: 463 DLIPPYLDQ--YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSI 520
Query: 1001 LGTLI 1005
L TL
Sbjct: 521 LNTLQ 525
Score = 58.3 bits (140), Expect = 2e-08
Identities = 87/631 (13%), Positives = 169/631 (26%), Gaps = 226/631 (35%)
Query: 761 IDYDLNVVKSESHYQNGPDTYLLQLRDV--DFPVR-----LREYIK-------VASTRPD 806
+D++ E YQ D + +F + + + + S
Sbjct: 7 MDFETG----EHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 807 LRLSTGFNCL------------DTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRIN 854
F L + + + I+ +R M + E+R+R+
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS-MMTRMYIEQRDRL- 119
Query: 855 KYGAADTYTLRRLRHEIGTRPEAHVEA-DALIESRRDGHAPFFREKPITIPVVIGDKLEM 913
Y + ++ + +R + +++ AL+E R P ++ G +
Sbjct: 120 -YNDNQVFA----KYNV-SRLQPYLKLRQALLELR-----------PAKNVLIDG----V 158
Query: 914 K-----CLA--VGEPKPV-------IQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGL 959
+A V V I W L +VL+ L
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN----------------SPETVLEML 202
Query: 960 QYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
Q L ++ + D+ +R S+Q +L L ++ L+
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN--CLL------------ 248
Query: 1018 PEVLAEEPIFPQTDVWSAGVLAY------VLLSGASPFRGQSEPETR--QNVNFV----- 1064
VL +V +A +LL+ TR Q +F+
Sbjct: 249 --VLL--------NVQNAKAWNAFNLSCKILLT------------TRFKQVTDFLSAATT 286
Query: 1065 -RYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAK 1123
++ LT + + L L +D +DL RE
Sbjct: 287 THISLDHHSMTLTPDEVKSL------------LLKYLDCR---PQDLPREV--------- 322
Query: 1124 NVIGWSEKGIPSALFKTKEQAPEVLAEEPI----FPQTDVWSAGVLAYVLLSGASPFRGQ 1179
P L E + + + + L ++ S
Sbjct: 323 ------LTTNPRRL----SIIAESIRDGLATWDNWKHVNCDK---LTTII---ESSLNVL 366
Query: 1180 SEPETRQNVNFVRYRFEYL--FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
E R+ F+ L F T L LI W +
Sbjct: 367 EPAEYRK-------MFDRLSVFPPSAHIPTILLSLI------------------WFDVIK 401
Query: 1238 Y----MIKKRERAVFLGNRLKEFSDEYHDLK-NKQFTSDSLSSLHKTLTRSNSIQEELIS 1292
++ K + + + KE + + + ++ +LH+++ +I + S
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461
Query: 1293 TAFTS-------------HLVNKPSSDSSTL 1310
HL N + TL
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492
Score = 56.4 bits (135), Expect = 7e-08
Identities = 105/727 (14%), Positives = 197/727 (27%), Gaps = 232/727 (31%)
Query: 25 HSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGR 84
H + E E++Y Y+ + D +D D V+
Sbjct: 3 HHHHMDFETGEHQYQYKDI-----LSVFEDAFVDNFDCKD-------------VQDMP-- 42
Query: 85 NYAAKVMTGKGTISHSVTVHV--EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGR 142
K +S H+ + + R + +K F +E+ R
Sbjct: 43 ---------KSILSKEEIDHIIMSKDAVSGTLRLF-----WTLLSKQEEMVQKFVEEVLR 88
Query: 143 GVTGTISHSVTVHVEDNENEYSYRTYARGRQVK------------TRTKPITDAYDFGDE 190
+ + E + R Y R +R +P E
Sbjct: 89 INYKFLMSP--IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE 146
Query: 191 LGRGVTGIVYH------------AVERSSG--RNYAAKV--MT-GKGNQYKSLFKNELDI 233
L R ++ V S K+ + N +++ L++
Sbjct: 147 L-RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV----LEM 201
Query: 234 MNQLCHR---NLVRLHDS-----YETKDSFTIISELAGGGELLHSL-------------- 271
+ +L ++ N D + L + L
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 272 ----------TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL--GLTPGDL--LVAHPG 317
TR T++ LS H +S+ H LTP ++ L+
Sbjct: 262 FNLSCKILLTTRFKQVTDF---------LSAATTTH-ISLDHHSMTLTPDEVKSLLL--- 308
Query: 318 GRHLLLTDFGLSRRITSFGKLNPLEYDV--RYVRQALRHPWLNFADRKPTEDTPKLNTDA 375
++L L R + NP + +R L W N+ +N D
Sbjct: 309 -KYLDCRPQDLPREVL---TTNPRRLSIIAESIRDGLAT-WDNW---------KHVNCDK 354
Query: 376 LRN-----YYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLV 430
L L Y R+ + R L ++PP P +L
Sbjct: 355 LTTIIESSLNVLEPAEY-----RKMFDR--L---------SVFPPSA-----HIPTILL- 392
Query: 431 SRDLRDVKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLL 490
W D + + DV + + L+ ++S + I ++ L
Sbjct: 393 ------SLIWFDVIKS---DVMVVVNKLHKYS----LVEKQPKESTISIPSIYLELKVKL 439
Query: 491 SGLDYMHRLSIAH----LGLTPGDLLVAHPG-------GRHLLLTDFGLSRRITSFGKLN 539
+HR + H DL+ + G HL + R+T F +
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE--HPERMTLFRMVF 497
Query: 540 PLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKY- 598
L++ + K+ H T + +++ Y
Sbjct: 498 -LDFRFLEQKIR---------------HDSTAWNASGSILNTLQQ----------LKFYK 531
Query: 599 QFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNL--RSLRHERIA 656
+I + K+ +V A F + + + +++ +L +L E A
Sbjct: 532 PYICDND-PKYERLVNAILD-----------FLPKIEE-NLICSKYTDLLRIALMAEDEA 578
Query: 657 SLLEAYK 663
EA+K
Sbjct: 579 IFEEAHK 585
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 78.9 bits (195), Expect = 8e-16
Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 7/156 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLC-H 239
+ + E+G G G V+ R +G A K M +G + K + +LD++ +
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILM-DLDVVLKSHDC 83
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-R 298
+V+ ++ T I EL G Q E + ++ L Y+ +
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ H + P ++L+ G + L DFG+S R+
Sbjct: 144 HGVIHRDVKPSNILLDERG--QIKLCDFGISGRLVD 177
Score = 41.6 bits (98), Expect = 0.001
Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 24/120 (20%)
Query: 949 AYCVTSVLDGLQYLH-WRGLCHLNIEPDNVVMASVRSVQVKLIDLG-------CTQRVTK 1000
+++ L YL G+ H +++P N+++ Q+KL D G +
Sbjct: 127 GKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD--ERGQIKLCDFGISGRLVDDKAKDRS 184
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPFRGQSEP 1055
G + APE + DVWS G+ L +G P++
Sbjct: 185 AGC---------AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
Score = 38.1 bits (89), Expect = 0.015
Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLL 522
Q E + ++ L Y+ + + H + P ++L+ G +
Sbjct: 108 TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--QIK 165
Query: 523 LTDFGLSRRITS 534
L DFG+S R+
Sbjct: 166 LCDFGISGRLVD 177
Score = 32.0 bits (73), Expect = 1.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ + E+G G G V+ R +G A K M
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQM 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Length = 681
Score = 81.1 bits (200), Expect = 1e-15
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L L YLH GL + +++P+N++ + Q+KLIDLG R+ G L TP
Sbjct: 191 ILPALSYLHSIGLVYNDLKPENIM---LTEEQLKLIDLGAVSRINSFGYLYG---TP--G 242
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
F APE++ P TD+++ G L G+ +
Sbjct: 243 FQAPEIVRTGPT-VATDIYTVGRTLAALTLDLPTRNGRYVDGLPE 286
Score = 71.8 bits (176), Expect = 8e-13
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 185 YDFGDELGRGVTGIVYHAV-ERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNL 242
Y+ + G G +Y A+ +GR K + G+ +++ E + ++ H ++
Sbjct: 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSI 141
Query: 243 VRLHDSYETKDSFT-----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
V++ + E D I+ E GG L S ++ + Y+ ++L L Y+H
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK--LPVAEAIAYLLEILPALSYLH 199
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
+ + + L P ++++ L L D G RI SFG
Sbjct: 200 SIGLVYNDLKPENIMLTEEQ---LKLIDLGAVSRINSFG 235
Score = 45.2 bits (107), Expect = 1e-04
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1186
QAPE++ P TD+++ G L G+ +
Sbjct: 244 QAPEIVRTGPT-VATDIYTVGRTLAALTLDLPTRNGRYVDGLPE 286
Score = 44.1 bits (104), Expect = 3e-04
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 483 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
Y+ ++L L Y+H + + + L P ++++ L L D G RI SFG
Sbjct: 185 IAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ---LKLIDLGAVSRINSFG 235
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 79.0 bits (195), Expect = 2e-15
Identities = 41/189 (21%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 155 HVEDNENEYSYRTYARGRQVKTRTKPIT-DAYDFGDELGRGVTGIVYHAVERSSGRNYAA 213
+ ++ + +A V+ + + D ++ +GRG V + +G+ YA
Sbjct: 32 ELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAM 91
Query: 214 KVM----TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLH 269
K+M K + F+ E D++ R + +LH +++ ++ ++ E GG+LL
Sbjct: 92 KIMNKWDMLKRGEVSC-FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLT 150
Query: 270 SLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL 328
L++ ++A Y+ +++ +D +HRL H + P ++L+ G H+ L DFG
Sbjct: 151 LLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG--HIRLADFGS 208
Query: 329 SRRITSFGK 337
++ + G
Sbjct: 209 CLKLRADGT 217
Score = 58.6 bits (142), Expect = 6e-09
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 15/137 (10%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NPEF 1015
+ +H G H +I+PDN+++ R ++L D G ++ GT+ P++
Sbjct: 174 AIDSVHRLGYVHRDIKPDNILLD--RCGHIRLADFGSCLKLRADGTVR--SLVAVGTPDY 229
Query: 1016 AAPEVLAEEPIFPQT-------DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRY 1066
+PE+L P T D W+ GV AY + G +PF S ET +
Sbjct: 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL 289
Query: 1067 RFEYLFKELTQEATRFL 1083
+ + + +EA F+
Sbjct: 290 SLPLVDEGVPEEARDFI 306
Score = 52.0 bits (125), Expect = 9e-07
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 463 PGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GG+LL L++ ++A Y+ +++ +D +HRL H + P ++L+ G H+
Sbjct: 144 VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG--HI 201
Query: 522 LLTDFGLSRRITSFGK 537
L DFG ++ + G
Sbjct: 202 RLADFGSCLKLRADGT 217
Score = 43.5 bits (103), Expect = 3e-04
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 1144 APEVLAEEPIFPQT-------DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYR 1194
+PE+L P T D W+ GV AY + G +PF S ET +
Sbjct: 231 SPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS 290
Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKR 1221
+ + + +EA R + P R
Sbjct: 291 LPLVDEGVPEEA-RDFIQRLLCPPETR 316
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin
domain, fibronectin type III repeat, CE adhesion; 1.80A
{Homo sapiens}
Length = 215
Score = 75.6 bits (186), Expect = 3e-15
Identities = 46/274 (16%), Positives = 81/274 (29%), Gaps = 73/274 (26%)
Query: 881 ADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPI 940
+ AL+ +AP + P+ + G+++ + C P I WF+ G
Sbjct: 7 SSALVPRGSHMYAPKLQ-GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQ-------- 57
Query: 941 VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQR 997
++P+++ + + +L + P D G CT
Sbjct: 58 LLPSSNYSNIKIYNTPSA---------SYLEVTP------------DSENDFGNYNCTAV 96
Query: 998 VTKLGTLIHPIN-----TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052
++G TP+ P Q + +S+ + G
Sbjct: 97 -NRIGQESLEFILVQADTPSS-----------PSIDQVEPYSSTA---QVQFDEPEATGG 141
Query: 1053 SEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
Y+ E+ + + +E W + LK
Sbjct: 142 VPILK--------YKAEW--RAVGEEVWH---------SKWYDAKEASMEGIVTIVGLKP 182
Query: 1113 ETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
ET Y RL+A N G E S FKT+ E
Sbjct: 183 ETTYAVRLAALNGKGLGEISAASE-FKTQPVQGE 215
Score = 29.8 bits (67), Expect = 5.1
Identities = 7/27 (25%), Positives = 9/27 (33%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
D G Y+ A N S + D
Sbjct: 86 NDFGNYNCTAVNRIGQESLEFILVQAD 112
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 78.2 bits (193), Expect = 4e-15
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 9/187 (4%)
Query: 156 VEDNENEYSYRTYARGRQVKTRTKPIT-DAYDFGDELGRGVTGIVYHAVERSSGRNYAAK 214
+ N+N ++ + + K R + + Y+ +GRG G V +S+ + YA K
Sbjct: 41 LRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 100
Query: 215 VM----TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHS 270
++ K + F E DIM +V+L +++ ++ E GG+L++
Sbjct: 101 LLSKFEMIKRSDSAF-FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 159
Query: 271 LTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
++ E Y +++ LD +H + H + P ++L+ G HL L DFG
Sbjct: 160 MSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCM 216
Query: 331 RITSFGK 337
++ G
Sbjct: 217 KMNKEGM 223
Score = 56.6 bits (137), Expect = 3e-08
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 959 LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NPEFA 1016
L +H G H +++PDN+++ +S +KL D G ++ K G + +T P++
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKEGMV--RCDTAVGTPDYI 236
Query: 1017 APEVLAEEPIF----PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF 1072
+PEVL + + D WS GV Y +L G +PF S T + + +
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296
Query: 1073 -KELTQEATRFL 1083
++++EA +
Sbjct: 297 DNDISKEAKNLI 308
Score = 51.2 bits (123), Expect = 1e-06
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
PGG+L++ ++ E Y +++ LD +H + H + P ++L+ G HL
Sbjct: 152 PGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLK 208
Query: 523 LTDFGLSRRITSFGK 537
L DFG ++ G
Sbjct: 209 LADFGTCMKMNKEGM 223
Score = 41.6 bits (98), Expect = 0.002
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 1144 APEVLAEEPIF----PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF 1199
+PEVL + + D WS GV Y +L G +PF S T + + +
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296
Query: 1200 -KELTQEATRFL 1210
++++EA +
Sbjct: 297 DNDISKEAKNLI 308
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 78.1 bits (193), Expect = 4e-15
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+G+G G V + + + YA K M + N+ +++F EL IM L H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF-KELQIMQGLEHPFLVNLW 81
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
S++ ++ ++ +L GG+L + L + ++ E + +I +L+ LDY+ I H +
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDM 141
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
P ++L+ G H+ +TDF ++ + ++
Sbjct: 142 KPDNILLDEHG--HVHITDFNIAAMLPRETQIT 172
Score = 55.0 bits (133), Expect = 8e-08
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 17/110 (15%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN----- 1012
L YL + + H +++PDN+++ V + D + ++
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILLDE--HGHVHITDFN-------IAAMLPRETQITTMAGT 177
Query: 1013 PEFAAPEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
+ APE+ + + D WS GV AY LL G P+ +S +++
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE 227
Score = 53.9 bits (130), Expect = 2e-07
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG+L + L + ++ E + +I +L+ LDY+ I H + P ++L+ G H+
Sbjct: 98 LGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG--HVH 155
Query: 523 LTDFGLSRRITSFGKLN 539
+TDF ++ + ++
Sbjct: 156 ITDFNIAAMLPRETQIT 172
Score = 47.3 bits (113), Expect = 2e-05
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 1144 APEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPETRQNV-NFVRYRFEYLF 1199
APE+ + + D WS GV AY LL G P+ +S +++ V F Y
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP- 240
Query: 1200 KELTQEATRFLMLIFKRAPGKR 1221
+QE L + + P +R
Sbjct: 241 SAWSQEMVSLLKKLLEPNPDQR 262
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 77.3 bits (191), Expect = 4e-15
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 8/183 (4%)
Query: 156 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 215
V++ + + T + +D LG G G V + SG +YA K+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQ-FDRIKTLGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 216 MTG----KGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL 271
+ K Q + NE I+ + LV+L S++ + ++ E GGE+ L
Sbjct: 74 LDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 272 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
R ++E Y Q++ +Y+H L + + L P +LL+ G ++ +TDFG ++R
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQVTDFGFAKR 190
Query: 332 ITS 334
+
Sbjct: 191 VKG 193
Score = 50.7 bits (122), Expect = 2e-06
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGE+ L R ++E Y Q++ +Y+H L + + L P +LL+ G ++
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181
Query: 523 LTDFGLSRRITS 534
+TDFG ++R+
Sbjct: 182 VTDFGFAKRVKG 193
Score = 50.0 bits (120), Expect = 3e-06
Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 36/169 (21%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TKLGTLIHPIN 1009
++ +YLH L + +++P+N+++ + +++ D G +RV T GT
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWTLCGT------ 201
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
PE APE++ + D W+ GVL Y + +G PF + + + + RF
Sbjct: 202 ---PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 1069 EYLFKELTQEATRFLML---------------IFKH----EVDWITLAN 1098
+ +L L + I H DWI +
Sbjct: 259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQ 307
Score = 41.9 bits (99), Expect = 0.001
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE++ + D W+ GVL Y + +G PF + + + + RF +
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP---SHFS 262
Query: 1204 QEATRFLMLIFKRAPGKR 1221
+ L + + KR
Sbjct: 263 SDLKDLLRNLLQVDLTKR 280
Score = 29.9 bits (68), Expect = 5.5
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 18 NIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHA 77
N A+ S V++ + + T + +D LG G G V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQ-FDRIKTLGTGSFGRVMLV 60
Query: 78 VERSSGRNYAAKVM 91
+ SG +YA K++
Sbjct: 61 KHKESGNHYAMKIL 74
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 79.7 bits (196), Expect = 5e-15
Identities = 110/688 (15%), Positives = 206/688 (29%), Gaps = 242/688 (35%)
Query: 541 LEYGNGQYKVAVTPAMKHLQAI--------TEAGHTPTLAQDPPPLNYSVEDSPIE-WST 591
L +G+ ++ + V P A T A D P +P E
Sbjct: 11 LSHGSLEHVLLV-PTASFFIASQLQEQFNKILPEPTEGFAADDEP------TTPAELVG- 62
Query: 592 EPPTDKY-QFISEIHRGKFSVVVKAAEKANTENLVAAKL--FE--Y-SHDTLHQVNTEFD 645
K+ ++S +V+ ++ + ++ L FE Y + +H + +
Sbjct: 63 -----KFLGYVSS--------LVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLL 109
Query: 646 NLRSLRHERIASLLEAY--------KPSTTASNIAVL--VME---KL------QGADVLS 686
+ L++ Y +P SN A+ V E +L QG +
Sbjct: 110 QENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQG-NTDD 168
Query: 687 Y---LSSRHE-YTEQNVATIISQAWEHYLKKNREQIADTADKSRI-PRTIREYREQSANT 741
Y L ++ Y V +I + E L E I T D ++ + +
Sbjct: 169 YFEELRDLYQTYHV-LVGDLIKFSAET-LS---ELIRTTLDAEKVFTQGL---------- 213
Query: 742 ANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQL-------RDVDF-PVR 793
++ W +N P+ P DY L++ S P ++QL + + F P
Sbjct: 214 ----NILEWLEN-PSNTPDKDYLLSIPIS------CPLIGVIQLAHYVVTAKLLGFTPGE 262
Query: 794 LREYIKVASTR-PDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNR 852
LR Y+K A+ L + D+ W++ F
Sbjct: 263 LRSYLKGATGHSQGLVTAVAIAETDS-------WES--------F--------------- 292
Query: 853 INKYGAADTYTLRRLRHEIGTR-----PEAHVEADALIESRRDGH-APFFREKPITIPVV 906
+ + + L IG R P + L +S + P P
Sbjct: 293 ---FVSVRKA-ITVLFF-IGVRCYEAYPNTSLPPSILEDSLENNEGVP----SP------ 337
Query: 907 IGDKLEMKCLAV-GEPKPVIQWFKLGTSTLCYLP----IVIPTTHKDAYCVTSVLDGLQY 961
M L++ + +Q T +LP + I S+++G
Sbjct: 338 ------M--LSISNLTQEQVQ--DYVNKTNSHLPAGKQVEI-----------SLVNG--- 373
Query: 962 LHWRGLCHLNIEPDNVVMA----SVRSVQVKLIDLGC-----------TQRVTKLGTLIH 1006
N+V++ S+ + + L ++R K
Sbjct: 374 ------------AKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFL 421
Query: 1007 PINTPNPEFAAPEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS--EP--ETRQN 1060
P+ +P F + +L A + I D+ V F + P +T
Sbjct: 422 PVASP---FHSH-LLVPASDLI--NKDLVKNNVS----------FNAKDIQIPVYDTFDG 465
Query: 1061 VNFVRYRFEYLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR-ETNYTF 1118
+ + L+ + + I + V W H+ D +
Sbjct: 466 SDL---------RVLSGSISERIVDCIIRLPVKW-ETTTQFKAT--HILDFGPGGASGLG 513
Query: 1119 RLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
L+ +N G G+ + T + P+
Sbjct: 514 VLTHRNKDG---TGVRVIVAGTLDINPD 538
Score = 71.6 bits (175), Expect = 2e-12
Identities = 100/627 (15%), Positives = 175/627 (27%), Gaps = 222/627 (35%)
Query: 234 MNQLCHRNLVRLHDSYET---------------KDSFTII-----SELAGGGE---LLHS 270
M+ R L H S E ++ F I A E
Sbjct: 1 MDAYSTRPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAEL 60
Query: 271 LTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
+ + + Y ++ + G +L +L LT+F
Sbjct: 61 VGK---FLGY-VSSLVEPSKVG--------------QFDQVL-------NLCLTEFE--- 92
Query: 331 RITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNT--DALRNYYNLYKDWYG 388
+ + N D+ H A + E+ L + ++NY
Sbjct: 93 --NCYLEGN----DI--------H---ALAAKLLQENDTTLVKTKELIKNYIT------A 129
Query: 389 NAAVRRYYRRRP----LNSCYTHPSRMIYPPGTQF------------------TPEPTPD 426
+R + ++ + ++ + F T
Sbjct: 130 RIMAKRPFDKKSNSALFRAVGEGNAQ-LV---AIFGGQGNTDDYFEELRDLYQTYHVLVG 185
Query: 427 KVL------VSRDLRDVKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLHS---------L 471
++ +S +R E +G ++ W +N P+ P + L S +
Sbjct: 186 DLIKFSAETLSELIRTTLDAEKVFT-QGLNILEWLEN-PSNTPDKDYLLSIPISCPLIGV 243
Query: 472 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL------LVAHPGGRHLLLTD 525
Q +AHY+ +L LG TPG+L H G L+T
Sbjct: 244 I-Q-------LAHYVV--------TAKL----LGFTPGELRSYLKGATGHSQG---LVTA 280
Query: 526 FGLSRRIT--SFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGH--TPTLAQDPPPLNYS 581
++ + SF + A+ L I + P + P L S
Sbjct: 281 VAIAETDSWESF------------FVSVRK-AITVLFFIGVRCYEAYPNTSLPPSILEDS 327
Query: 582 VEDSPIEWSTEPPTDKYQF-ISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQV 640
+E++ E P+ IS + + + V K N+ L + V
Sbjct: 328 LENN--E---GVPS--PMLSISNLTQEQ---VQDYVNKTNSH------LPAGKQVEISLV 371
Query: 641 NTEFDNL------RSLRHERIASLLEAYK-PSTTASNIAVLVMEKLQGADVLSYL--SSR 691
N NL +SL + L K PS + KL+ +L +S
Sbjct: 372 NG-AKNLVVSGPPQSLYG--LNLTLRKAKAPSGLDQSRIPFSERKLKF--SNRFLPVASP 426
Query: 692 -H-EYTEQNVATIISQAWEHYLKKNREQIA----DTADKSRIPRTIREYREQSAN-TANL 744
H I ++ + N + I DT D S + R S + + +
Sbjct: 427 FHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDL-------RVLSGSISERI 479
Query: 745 RDVKT-----WEDNVPNR-------GP 759
D WE + GP
Sbjct: 480 VDCIIRLPVKWETTTQFKATHILDFGP 506
Score = 67.0 bits (163), Expect = 4e-11
Identities = 91/612 (14%), Positives = 171/612 (27%), Gaps = 210/612 (34%)
Query: 760 AIDYDLNVVKSESHYQNGPDTYLLQLRDVDF----PVRLREYIKV--ASTRPDLRLS-TG 812
++++ L V + + QL++ F P + +T +L G
Sbjct: 15 SLEHVLLV--PTASF-----FIASQLQE-QFNKILPEPTEGFAADDEPTTPAELVGKFLG 66
Query: 813 F--NCLDTSENGHLDWKAPVIR------ERR--RFTDV--------MDEEIDDERRNRIN 854
+ + ++ S+ G D V+ E D+ + + + +
Sbjct: 67 YVSSLVEPSKVGQFD---QVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELI 123
Query: 855 K-YGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEM 913
K Y T R + RP AL + +G+A + G
Sbjct: 124 KNY-----ITARIM----AKRPFDKKSNSALFRAVGEGNAQLV--------AIFG----- 161
Query: 914 KCLAVGEPKPVIQ-----WFK----LGTSTLCYLPIVIPTTHKDA----YCVTSVLD--- 957
G Q +F+ L + Y +V A + + LD
Sbjct: 162 -----G------QGNTDDYFEELRDLYQT---YHVLVGDLIKFSAETLSELIRTTLDAEK 207
Query: 958 ----GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
GL L W L + + PD + S+ + LI + Q L H + T
Sbjct: 208 VFTQGLNILEW--LENPSNTPDKDYLLSI-PISCPLIGV--IQ-------LAHYVVTAKL 255
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
P L S G++ V ++ S +V LF
Sbjct: 256 LGFTPGELR--SYLKGATGHSQGLVTAVAIAETD-----SWESFFVSVRKA---ITVLFF 305
Query: 1074 ---ELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSE 1130
EA L L +++++ E + LS + ++
Sbjct: 306 IGVR-CYEAYPNTSLPPS------ILEDSLENN---------EGVPSPMLS---ISNLTQ 346
Query: 1131 KGIPSALFKTKEQAPEVLAEEPIF------PQTDVWS------AGVLAYVLLSGASPFRG 1178
+ + + KT P + + + V S G+ + + A
Sbjct: 347 EQVQDYVNKTNSHLPA---GKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLD 403
Query: 1179 QSE-PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
QS P + + + F RFL + +P H S
Sbjct: 404 QSRIPFSERKLKFS---------------NRFLP-VA--SP--------FH-------SH 430
Query: 1238 YMIKKRERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSL----HKTLT----R--SNSIQ 1287
+ A + + + DL + ++ + + T R S SI
Sbjct: 431 LL----VPAS---DLINK------DLVKNNVSFNA-KDIQIPVYDTFDGSDLRVLSGSIS 476
Query: 1288 EELISTAFTSHL 1299
E ++ +
Sbjct: 477 ERIVDCIIRLPV 488
Score = 63.1 bits (153), Expect = 5e-10
Identities = 96/640 (15%), Positives = 190/640 (29%), Gaps = 265/640 (41%)
Query: 22 TISH---SVTVHVEDNENEYSYRTYARGRQVK---TRTKPI-TDAYDFGDELGRGVTGIV 74
T+SH + V ++ Q++ + P T+ + DE
Sbjct: 10 TLSHGSLEHVLLV-------PTASFFIASQLQEQFNKILPEPTEGFAADDEP-------- 54
Query: 75 YHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAY 134
++ K + G +S V E ++ + + + Y
Sbjct: 55 ------TTPAELVGKFL---GYVSSLV----EPSKVG------QFDQVLNLCLTEFENCY 95
Query: 135 DFGDELGRGVTGTISHSVTVHV-EDNENEYSY-----RTYARGRQVKTR--TKPITDAYD 186
G+++ H++ + ++N+ + Y R + R K A
Sbjct: 96 LEGNDI---------HALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSA-- 144
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVR 244
++ AV + + A + G+GN Y F+ EL R+L
Sbjct: 145 ------------LFRAVGEGNAQLVA--IFGGQGNTDDY---FE-EL--------RDL-- 176
Query: 245 LHDSYETKDSF--TIISELAGGGELLHSLTRQS-----YYTE-YDIAHYIRQLLS--GLD 294
Y+T +I A E L L R + +T+ +I ++ + D
Sbjct: 177 ----YQTYHVLVGDLIKFSA---ETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKD 229
Query: 295 YMHR----------LSIAH-------LGLTPGDL------LVAHPGGRHLLLTDFGLSRR 331
Y+ + +AH LG TPG+L H G L+T ++
Sbjct: 230 YLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQG---LVTAVAIAET 286
Query: 332 IT--SFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGN 389
+ SF VR+A+ L F + G
Sbjct: 287 DSWESFFVS---------VRKAIT--VL-F--------------------------FIG- 307
Query: 390 AAVRRYYRRRPLNSCY-THPSRMIYPPGTQFTPE-----PTPDKVLVSRDLRDVKTWEDN 443
VR CY +P+ + P + + E P+P +L +L +
Sbjct: 308 --VR----------CYEAYPNTSLPPSILEDSLENNEGVPSP--MLSISNLTQEQ----- 348
Query: 444 VPNRGPDVKTWEDNVPNRGPGGELLH-SL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLS 500
V+ + + + P G+ + SL + + + +SG
Sbjct: 349 -------VQDYVNKTNSHLPAGKQVEISLVNGAK---------NLV---VSG-------- 381
Query: 501 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS---RRITSFGKLNPLEYGNGQYKV-----AV 552
P L +GL+ R+ + G Q ++ +
Sbjct: 382 ------PPQSL--------------YGLNLTLRKAKA-------PSGLDQSRIPFSERKL 414
Query: 553 TPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTE 592
+ + L + H+ L +N + + + ++ +
Sbjct: 415 KFSNRFL-PVASPFHSHLLVPASDLINKDLVKNNVSFNAK 453
Score = 58.5 bits (141), Expect = 1e-08
Identities = 120/757 (15%), Positives = 208/757 (27%), Gaps = 325/757 (42%)
Query: 127 TKPITDAYDFGDELGRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVK---TRTKPI-T 182
T+P+T ++ G++ H + V ++ Q++ + P T
Sbjct: 6 TRPLTLSH-----------GSLEHVLLV---------PTASFFIASQLQEQFNKILPEPT 45
Query: 183 DAYDFGDE-------LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN 235
+ + DE +G+ G V VE S + V+ ++++ + DI
Sbjct: 46 EGFAADDEPTTPAELVGK-FLGYVSSLVEPSKVGQFDQ-VLNLCLTEFENCYLEGNDI-- 101
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
H +L +T L EL+ ++Y T A R +
Sbjct: 102 ---HALAAKLLQENDTT--------LVKTKELI-----KNYIT----A---RIMAK---- 134
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHP 355
L A G L+ FG G+ N +Y
Sbjct: 135 -RPFDKKS----NSALFRAVGEGNAQLVAIFG--------GQGNTDDY------------ 169
Query: 356 WLNFADRKPTEDTPKLNTDALRNYYNLYK----DWYGNAAVRRYYRRRPLNSCYTHPSRM 411
F + LR+ Y Y D +A L+
Sbjct: 170 ---F--------------EELRDLYQTYHVLVGDLIKFSAET-------LSELIRTTLDA 205
Query: 412 --IYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLH 469
++ G ++ W +N P+ PD + ++P P L
Sbjct: 206 EKVFTQG------------------LNILEWLEN-PSNTPDK-DYLLSIPISCP----LI 241
Query: 470 SLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL------LVAHPGGRHLLL 523
+ Q +AHY+ +L LG TPG+L H G L+
Sbjct: 242 GVI-Q-------LAHYVV--------TAKL----LGFTPGELRSYLKGATGHSQG---LV 278
Query: 524 TDFGLSRRIT--SFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGH--TPTLAQDPPPLN 579
T ++ + SF + A+ L I + P + P L
Sbjct: 279 TAVAIAETDSWESF------------FVSVRK-AITVLFFIGVRCYEAYPNTSLPPSILE 325
Query: 580 YSVED-----SPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH 634
S+E+ SP+ S+ NL ++ +Y
Sbjct: 326 DSLENNEGVPSPM---------------------LSI----------SNLTQEQVQDY-- 352
Query: 635 DTLHQVNTEFDNLRSLRHERIA-SLLEAYKPSTTASNIAVLVMEKLQGAD--VLS----Y 687
+++ N+ +++ SL+ N GA V+S
Sbjct: 353 --VNKTNSHLP-----AGKQVEISLV----------N----------GAKNLVVSGPPQS 385
Query: 688 LSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDV 747
L L+K + D+SRIP + E
Sbjct: 386 L----------------YGLNLTLRKAK--APSGLDQSRIP-----FSE----------- 411
Query: 748 KTWEDNVPNRGPAIDYD-LNVVKSE---SHY-QNGPDTYLLQLRDVDFPVR---LREYIK 799
R L V + SH D L + ++ I
Sbjct: 412 ---------RKLKFSNRFLPV--ASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQ--IP 458
Query: 800 VASTR--PDLRLSTG------FNCLDTSENGHLDWKA 828
V T DLR+ +G +C+ + W+
Sbjct: 459 VYDTFDGSDLRVLSGSISERIVDCIIRL---PVKWET 492
Score = 46.6 bits (110), Expect = 7e-05
Identities = 55/359 (15%), Positives = 104/359 (28%), Gaps = 105/359 (29%)
Query: 980 ASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLA 1039
S R + + G+L H + P F L E+ F +
Sbjct: 4 YSTRPLTLSH------------GSLEHVLLVPTASFFIASQLQEQ--FNKI--------- 40
Query: 1040 YVLLSGASPFRGQSEPETRQN-----VNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWI 1094
L F EP T + +V E + + F++
Sbjct: 41 --LPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCY--- 95
Query: 1095 TLA-NNIDHEFWHVKDLKRET----------NYTFRLSAKNVIGWS-EKGIPSALFKTKE 1142
L N+I H + +T NY ++A+ + +K SALF+
Sbjct: 96 -LEGNDI-HALAAKLLQENDTTLVKTKELIKNY---ITARIMAKRPFDKKSNSALFRA-- 148
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETR----QNVNFVRYRFEYL 1198
E +A + + F GQ + +++ + Y L
Sbjct: 149 ------VGEG--------NAQL--VAI------FGGQGNTDDYFEELRDL-YQTYH--VL 183
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEE-CHENRWL-----VPS-EYMIKKRERAV---F 1248
+L + + L + + + + WL P +Y++ +
Sbjct: 184 VGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLL---SIPISCPL 240
Query: 1249 LGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDS 1307
+G + + + K FT L S K T + L++ + +DS
Sbjct: 241 IG--VIQLAHYVVTAKLLGFTPGELRSYLKGAT---GHSQGLVTAVAIA------ETDS 288
Score = 35.8 bits (82), Expect = 0.14
Identities = 53/321 (16%), Positives = 94/321 (29%), Gaps = 129/321 (40%)
Query: 1 MGDCIGRDEGLY--SVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITD 58
MG D LY S A+++ + + + TY P+
Sbjct: 1631 MG----MD--LYKTSKAAQDVW------------NRADNHFKDTYGFSILDIVINNPVNL 1672
Query: 59 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVT---VHVEDNENEYSY- 114
FG E G+ + NY+A M + + + + E NE+ SY
Sbjct: 1673 TIHFGGEKGKRIR------------ENYSA--MIFETIVDGKLKTEKIFKEINEHSTSYT 1718
Query: 115 ---------RT-----------YARGRQVKTRTKPITDAYDFGDELGRGVTGTISHSVTV 154
T A +K++ DA G HS+
Sbjct: 1719 FRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADAT---------FAG---HSL-- 1764
Query: 155 HVEDNENEYSYRTYAR----G--------RQVKTRTKPITDAYDFGDELGRGVTGIVYHA 202
EY+ A V R + A DELGR G++ A
Sbjct: 1765 ------GEYA----ALASLADVMSIESLVEVVFYRGMTMQVAVP-RDELGRSNYGMI--A 1811
Query: 203 V---------ERSSGRNYAAKV--MTGK----------GNQY------KSLFKNEL-DIM 234
+ + + + +V TG QY ++L + + +++
Sbjct: 1812 INPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRAL--DTVTNVL 1869
Query: 235 NQLCHRN--LVRLHDSYETKD 253
N + + ++ L S ++
Sbjct: 1870 NFIKLQKIDIIELQKSLSLEE 1890
Score = 32.7 bits (74), Expect = 1.2
Identities = 24/157 (15%), Positives = 49/157 (31%), Gaps = 42/157 (26%)
Query: 984 SVQVKLIDLGCTQRVTKLGTLIHPIN----TPN--P-----EFAAPEVLAEEPIFPQTDV 1032
++ + I + T T T P E AA E L + + P
Sbjct: 1700 KLKTEKIFKEINEHSTSY-TFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADAT 1758
Query: 1033 --------WSAGVLAYVLLSGASPF---------RGQS-------EPETRQNVNFVRYRF 1068
++A LA + + RG + + R N +
Sbjct: 1759 FAGHSLGEYAA--LASL--ADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINP 1814
Query: 1069 EYLFKELTQEATRFLMLIFKHEVDWI-TLAN-NIDHE 1103
+ +QEA ++++ W+ + N N++++
Sbjct: 1815 GRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQ 1851
Score = 32.3 bits (73), Expect = 1.4
Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 49/159 (30%)
Query: 1130 EKGIPSALFKTKEQAPEVLAE-EPIFPQTDVWSAGVLAYVL---LSGASPFRGQSEPETR 1185
E+G+ L+KT + A +V + F T +S +L V+ ++ F G+ R
Sbjct: 1628 EQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFS--ILDIVINNPVNLTIHFGGEKGKRIR 1685
Query: 1186 QNVNFVRY--------RFEYLFKELTQEATRFLMLIFKRAPGKR--------P---TVE- 1225
+N + + + + E +FKE+ + +T F R+ P +E
Sbjct: 1686 ENYSAMIFETIVDGKLKTEKIFKEINEHSTS---YTF-RSEKGLLSATQFTQPALTLMEK 1741
Query: 1226 ---ECHENRWLVPSEYMIKKRERAVF----LGNRLKEFS 1257
E +++ L+P++ A F LG E++
Sbjct: 1742 AAFEDLKSKGLIPAD--------ATFAGHSLG----EYA 1768
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 77.0 bits (189), Expect = 9e-15
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 24/226 (10%)
Query: 853 INKYGAADTYTLRRLRHEIG-TRPEAHVEADALIESRRDGHAPFFREKPITIPVVI---- 907
+ +++++ E+ R ++ + PF K +I
Sbjct: 111 PYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL 170
Query: 908 -GDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTS-VLDGLQYLHWR 965
+ + P+ G L + H +T V+ L LH
Sbjct: 171 DERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 230
Query: 966 GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQR-----VTKLGTLIHPINTPNPEFAAPEV 1020
GL H + P ++V+ + V L R V+ +G P PE A +
Sbjct: 231 GLVHTYLRPVDIVLD--QRGGVFLTGFEHLVRDGASAVSPIGRGFAP-----PETTAERM 283
Query: 1021 LAEEPIFPQ-----TDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
L P D W+ G+ Y + P + + +
Sbjct: 284 LPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI 329
Score = 72.8 bits (178), Expect = 2e-13
Identities = 27/183 (14%), Positives = 53/183 (28%), Gaps = 38/183 (20%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT---GKGNQYKSLFKNELDIMNQLC--- 238
G LG+ A ++ +G ++ V + K E+ + L
Sbjct: 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139
Query: 239 -------------------HRNLVRLHDSYETKDSFTIISE----------LAGGGELLH 269
++ + ++S L GE+L
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199
Query: 270 SLTRQSYYTEYDIAHYI-RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL 328
S + + + Q++ L +H + H L P D+++ G + LT F
Sbjct: 200 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG--GVFLTGFEH 257
Query: 329 SRR 331
R
Sbjct: 258 LVR 260
Score = 50.8 bits (121), Expect = 2e-06
Identities = 14/100 (14%), Positives = 25/100 (25%), Gaps = 17/100 (17%)
Query: 1144 APEVLAEE----------PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1193
PE AE + D W+ G+ Y + P + + + +
Sbjct: 275 PPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI----F 330
Query: 1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
R + Q L + R + E
Sbjct: 331 RSCK---NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 367
Score = 48.5 bits (115), Expect = 1e-05
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 462 GPGGELLHSLTRQSYYTEYDIAHYI-RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
GE+L S + + + Q++ L +H + H L P D+++ G
Sbjct: 192 QTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG--G 249
Query: 521 LLLTDFGLSRR 531
+ LT F R
Sbjct: 250 VFLTGFEHLVR 260
Score = 40.0 bits (93), Expect = 0.005
Identities = 6/33 (18%), Positives = 12/33 (36%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 92
G LG+ A ++ +G ++ V
Sbjct: 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPY 112
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 75.5 bits (186), Expect = 1e-14
Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 7/151 (4%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
G+ LG+G G R +G K + + + F E+ +M L H N+++
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
I+E GG L + + S Y + + + SG+ Y+H ++I H
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133
Query: 306 LTPGDLLVAHPGGRHLLL--TDFGLSRRITS 334
L + LV + + DFGL+R +
Sbjct: 134 LNSHNCLV----RENKNVVVADFGLARLMVD 160
Score = 36.9 bits (86), Expect = 0.033
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 15/107 (14%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-------CTQRVTKLGTLIHPINT 1010
G+ YLH + H ++ N ++ + V + D G + L +L P
Sbjct: 120 GMAYLHSMNIIHRDLNSHNCLVRE--NKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 1011 P------NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
NP + APE++ + DV+S G++ ++ +
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224
Score = 33.1 bits (76), Expect = 0.48
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 13/57 (22%)
Query: 480 YDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL--TDFGLSRRITS 534
DIA SG+ Y+H ++I H L + LV + + DFGL+R +
Sbjct: 115 KDIA-------SGMAYLHSMNIIHRDLNSHNCLV----RENKNVVVADFGLARLMVD 160
Score = 29.6 bits (67), Expect = 6.4
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1178
APE++ + DV+S G++ ++ +
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 75.3 bits (186), Expect = 1e-14
Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQ 236
+ + Y+ ++G G G+V+ R +G+ A K ++ + K E+ ++ Q
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF--LESEDDPVIKKIALREIRMLKQ 58
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYIRQLLS 291
L H NLV L + + K ++ E H++ Q E+ + Q L
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEY-----CDHTVLHELDRYQRGVPEHLVKSITWQTLQ 113
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+++ H+ + H + P ++L+ + L DFG +R +T
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHS--VIKLCDFGFARLLTG 154
Score = 47.2 bits (113), Expect = 2e-05
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
E+ + Q L +++ H+ + H + P ++L+ + L DFG +R +T
Sbjct: 100 PEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS--VIKLCDFGFARLLTG 154
Score = 36.8 bits (86), Expect = 0.040
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT---EFDNLRSLRH 652
+KY+ I +I G + VV K + +T +VA K F S D E L+ L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNR-DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYL-SSRHEYTEQNVATIISQ 705
+ +LLE ++ + LV E VL L + E V +I Q
Sbjct: 62 PNLVNLLEVFR---RKRRL-HLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQ 110
Score = 34.8 bits (81), Expect = 0.15
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 30/114 (26%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
L + + H H +++P+N+++ + +KL D G + P+
Sbjct: 111 TLQAVNFCHKHNCIHRDVKPENILIT--KHSVIKLCDFG----------FARLLTGPSDY 158
Query: 1015 FA---------APEVL--AEE---PIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
+ +PE+L + P+ DVW+ G + LLSG + G+S+
Sbjct: 159 YDDEVATRWYRSPELLVGDTQYGPPV----DVWAIGCVFAELLSGVPLWPGKSD 208
Score = 33.3 bits (77), Expect = 0.44
Identities = 25/119 (21%), Positives = 39/119 (32%), Gaps = 41/119 (34%)
Query: 1144 APEVL--AEE---PIFPQTDVWSAGVLAYVLLSGASPFRGQSE----------------- 1181
+PE+L + P+ DVW+ G + LLSG + G+S+
Sbjct: 170 SPELLVGDTQYGPPV----DVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPR 225
Query: 1182 --PETRQNVNFVRYRF---------EYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
N F + E F ++ A L L P +R T E+
Sbjct: 226 HQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMD--PTERLTCEQL 282
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 77.5 bits (191), Expect = 1e-14
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG+G G V R++G+ YA K + K NE I+ ++ R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEKVNSRFVVSLA 250
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+YETKD+ ++ L GG+L + Q+ + E Y ++ GL+ +HR I +
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
L P ++L+ G H+ ++D GL+ +
Sbjct: 311 DLKPENILLDDHG--HIRISDLGLAVHVP 337
Score = 67.1 bits (164), Expect = 2e-11
Identities = 28/137 (20%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRV------TKLGTLIHP 1007
+ GL+ LH + + +++P+N+++ +++ DLG ++GT
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIKGRVGT---- 348
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
+ APEV+ E D W+ G L Y +++G SPF+ + + R+ V +
Sbjct: 349 -----VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
Query: 1068 FEYLF-KELTQEATRFL 1083
+ + + +A
Sbjct: 404 VPEEYSERFSPQARSLC 420
Score = 57.1 bits (138), Expect = 3e-08
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KEL 1202
APEV+ E D W+ G L Y +++G SPF+ + + R+ V + + +
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF 412
Query: 1203 TQEATRFLMLIFKRAPGKR 1221
+ +A + + P +R
Sbjct: 413 SPQARSLCSQLLCKDPAER 431
Score = 44.8 bits (106), Expect = 2e-04
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 463 PGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
GG+L + Q+ + E Y ++ GL+ +HR I + L P ++L+ G H
Sbjct: 267 NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG--H 324
Query: 521 LLLTDFGLSRRIT 533
+ ++D GL+ +
Sbjct: 325 IRISDLGLAVHVP 337
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 77.1 bits (190), Expect = 2e-14
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LGRG G V+ +++G+ YA K + K Y+ E I+ ++ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA-MVEKKILAKVHSRFIVSLA 251
Query: 247 DSYETKDSFTIISELAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
++ETK ++ + GG++ + + + E Y Q++SGL+++H+ +I
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
+ L P ++L+ G ++ ++D GL+ + +
Sbjct: 312 YRDLKPENVLLDDDG--NVRISDLGLAVELKAGQT 344
Score = 62.9 bits (153), Expect = 4e-10
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI-NTPNP 1013
++ GL++LH R + + +++P+NV++ V++ DLG + T TP
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDD--DGNVRISDLGLAVELKAGQTKTKGYAGTP-- 353
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
F APE+L E D ++ GV Y +++ PFR + E + +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
Score = 51.7 bits (124), Expect = 1e-06
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF--KE 1201
APE+L E D ++ GV Y +++ PFR + E + + R + + +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL-KQRVLEQAVTYPDK 415
Query: 1202 LTQEATRFLMLIFKRAPGKR 1221
+ + F + ++ P KR
Sbjct: 416 FSPASKDFCEALLQKDPEKR 435
Score = 44.4 bits (105), Expect = 2e-04
Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 463 PGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
GG++ + + + E Y Q++SGL+++H+ +I + L P ++L+ G
Sbjct: 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG- 326
Query: 519 RHLLLTDFGLSRRITSFGK 537
++ ++D GL+ + +
Sbjct: 327 -NVRISDLGLAVELKAGQT 344
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 74.3 bits (183), Expect = 2e-14
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-------FKNELDIMNQLC 238
++ ++G+G G+V+ A K + ++ ++ F+ E+ IM+ L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDY 295
H N+V+L+ + ++ E G+L H L ++ + +R +L G++Y
Sbjct: 82 HPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEY 137
Query: 296 MHRLS--IAHLGLTPGDLLVAHPGGRHLL---LTDFGLSR 330
M + I H L ++ + + + DFGLS+
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
Score = 43.1 bits (102), Expect = 3e-04
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 958 GLQYLHWRG--LCHLNIEPDNVVMASV---RSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
G++Y+ + + H ++ N+ + S+ V K+ D G +Q+ + N
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG----LLGN 189
Query: 1013 PEFAAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRG 1051
++ APE + E + D +S ++ Y +L+G PF
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Score = 33.8 bits (78), Expect = 0.29
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDYMHRLS--IAHLGLTPGDLLVAHPG 517
P G+L H L ++ + +R +L G++YM + I H L ++ +
Sbjct: 104 PCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161
Query: 518 GRHLL---LTDFGLSR 530
+ + DFGLS+
Sbjct: 162 ENAPVCAKVADFGLSQ 177
Score = 32.3 bits (74), Expect = 0.92
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 1144 APEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRG 1178
APE + E + D +S ++ Y +L+G PF
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 75.9 bits (187), Expect = 2e-14
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 157 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 216
E N EY +VK D ++ +GRG G V +++ + +A K++
Sbjct: 49 EKNILEYLEWAKPFTSKVKQMRLHRED-FEILKVIGRGAFGEVAVVKLKNADKVFAMKIL 107
Query: 217 TGKGNQYK----SLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLT 272
K K + F+ E D++ + + LH +++ ++ ++ + GG+LL L+
Sbjct: 108 N-KWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLS 166
Query: 273 RQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
+ E Y+ +++ +D +H+L H + P ++L+ G H+ L DFG +
Sbjct: 167 KFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLADFGSCLK 224
Query: 332 ITSFG 336
+ G
Sbjct: 225 LMEDG 229
Score = 59.8 bits (145), Expect = 4e-09
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NPEF 1015
+ +H H +I+PDN++M + ++L D G ++ + GT+ + P++
Sbjct: 187 AIDSVHQLHYVHRDIKPDNILMD--MNGHIRLADFGSCLKLMEDGTVQS--SVAVGTPDY 242
Query: 1016 AAPEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
+PE+L D WS GV Y +L G +PF +S ET + + RF++
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302
Query: 1071 --LFKELTQEATRFL 1083
++++ A +
Sbjct: 303 PTQVTDVSENAKDLI 317
Score = 50.1 bits (120), Expect = 3e-06
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 463 PGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GG+LL L++ E Y+ +++ +D +H+L H + P ++L+ G H+
Sbjct: 157 VGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HI 214
Query: 522 LLTDFGLSRRITSFG 536
L DFG ++ G
Sbjct: 215 RLADFGSCLKLMEDG 229
Score = 46.7 bits (111), Expect = 4e-05
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 1144 APEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY- 1197
+PE+L D WS GV Y +L G +PF +S ET + + RF++
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP 303
Query: 1198 -LFKELTQEATRFLMLIFKRAPGKR 1221
++++ A + + R
Sbjct: 304 TQVTDVSENAKDLIRRLICSRE-HR 327
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 73.5 bits (181), Expect = 3e-14
Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 20/167 (11%)
Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL----FKNELDIMNQLCHRN 241
+ +G G G VY A G A K ++ S + E + L H N
Sbjct: 10 TLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHR- 298
++ L + + ++ E A GG L L+ + + A Q+ G++Y+H
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA---VQIARGMNYLHDE 124
Query: 299 --LSIAHLGLTPGDLLVAHPGGRHLL------LTDFGLSRRITSFGK 337
+ I H L ++L+ L +TDFGL+R K
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171
Score = 49.2 bits (118), Expect = 4e-06
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 24/125 (19%)
Query: 958 GLQYLHWRGLC---HLNIEPDNVVMASVRSVQ------VKLIDLG------CTQRVTKLG 1002
G+ YLH + H +++ N+++ +K+ D G T +++ G
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAG 176
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
+ APEV+ +DVWS GVL + LL+G PFRG V
Sbjct: 177 A---------YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227
Query: 1063 FVRYR 1067
+
Sbjct: 228 MNKLA 232
Score = 38.4 bits (90), Expect = 0.011
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEV+ +DVWS GVL + LL+G PFRG V +
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP--IPSTC 239
Query: 1204 QEATRFLMLI-FKRAPGKRPTVEE 1226
E LM + P RP+
Sbjct: 240 PEPFAKLMEDCWNPDPHSRPSFTN 263
Score = 32.6 bits (75), Expect = 0.67
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 14/86 (16%)
Query: 463 PGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHR---LSIAHLGLTPGDLLVAHPG 517
GG L L+ + + A Q+ G++Y+H + I H L ++L+
Sbjct: 89 RGGPLNRVLSGKRIPPDILVNWA---VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKV 145
Query: 518 GRHLL------LTDFGLSRRITSFGK 537
L +TDFGL+R K
Sbjct: 146 ENGDLSNKILKITDFGLAREWHRTTK 171
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 74.2 bits (183), Expect = 4e-14
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
+ Y+ +G G G+V + +GR A K + + K E+ ++ QL
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLR 82
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYIRQLLSGL 293
H NLV L + + K + ++ E + H++ + + Y+ Q+++G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEF-----VDHTILDDLELFPNGLDYQVVQKYLFQIINGI 137
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ H +I H + P ++LV+ G + L DFG +R + +
Sbjct: 138 GFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAA 176
Score = 47.2 bits (113), Expect = 2e-05
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
+ Y+ Q+++G+ + H +I H + P ++LV+ G + L DFG +R + +
Sbjct: 122 DYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAA 176
Score = 35.7 bits (83), Expect = 0.092
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 18/118 (15%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLR 648
+KY+ + + G + +V+K K +T +VA K F S D + ++ L+
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNK-DTGRIVAIKKFLESDDDKMVKKIAMREIKL----LK 79
Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE-YTEQNVATIISQ 705
LRHE + +LLE K LV E + +L L Q V + Q
Sbjct: 80 QLRHENLVNLLEVCK---KKKRW-YLVFEFVD-HTILDDLELFPNGLDYQVVQKYLFQ 132
Score = 34.1 bits (79), Expect = 0.29
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
++G+ + H + H +I+P+N++++ +S VKL D G + P +
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILVS--QSGVVKLCDFG----------FARTLAAPGEVY 181
Query: 1016 A---------APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
APE+L + + DVW+ G L + G F G S+
Sbjct: 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
Score = 33.7 bits (78), Expect = 0.35
Identities = 24/115 (20%), Positives = 35/115 (30%), Gaps = 33/115 (28%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE-------------------PE 1183
APE+L + + DVW+ G L + G F G S+
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL 251
Query: 1184 TRQNVNFVRYRF---------EYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+N F R E + +L++ L P KRP E
Sbjct: 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID--PDKRPFCAEL 304
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 73.9 bits (182), Expect = 4e-14
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLV 243
+ +++G G G V+ A G + A K++ + + + F E+ IM +L H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDYMHRLS 300
+ + +I++E G L L + + D + G++Y+H +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 301 --IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L +LLV + + DFGLSR
Sbjct: 158 PPIVHRNLKSPNLLVDK--KYTVKVCDFGLSR 187
Score = 45.4 bits (108), Expect = 7e-05
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 958 GLQYLHWRGLC--HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
G+ YLH R H N++ N+++ VK+ D G R+ L PE+
Sbjct: 149 GMNYLHNRNPPIVHRNLKSPNLLVDK--KYTVKVCDFG-LSRLKASTFLSSKSAAGTPEW 205
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
APEVL +EP ++DV+S GV+ + L + P+
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241
Score = 36.9 bits (86), Expect = 0.037
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1178
APEVL +EP ++DV+S GV+ + L + P+
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241
Score = 33.8 bits (78), Expect = 0.28
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDYMHRLS--IAHLGLTPGDLLVAHPG 517
G L L + + D + G++Y+H + I H L +LLV
Sbjct: 117 SRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK-- 174
Query: 518 GRHLLLTDFGLSR 530
+ + DFGLSR
Sbjct: 175 KYTVKVCDFGLSR 187
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 73.4 bits (181), Expect = 7e-14
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG-----NQYKSLFKNELDIMNQLCHRNLVRL 245
LG+G G V E+++GR YA K++ K ++ E ++ H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHT-VTESRVLQNTRHPFLTAL 70
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
+++T D + E A GGEL L+R+ +TE Y +++S L+Y+H + +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
+ +L++ G H+ +TDFGL
Sbjct: 131 IKLENLMLDKDG--HIKITDFGLC 152
Score = 63.8 bits (156), Expect = 1e-10
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
++ L+YLH R + + +I+ +N+++ +K+ D G C K G I T
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLC-----KEG--ISDGATMKT 164
Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
PE+ APEVL + D W GV+ Y ++ G PF Q + + RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 1069 EYLFKELTQEATRFL 1083
+ L+ EA L
Sbjct: 225 P---RTLSPEAKSLL 236
Score = 53.8 bits (130), Expect = 2e-07
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + RF + L+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLS 229
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L + K+ P +R
Sbjct: 230 PEAKSLLAGLLKKDPKQR 247
Score = 49.5 bits (119), Expect = 3e-06
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL L+R+ +TE Y +++S L+Y+H + + + +L++ G H+
Sbjct: 88 NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIK 145
Query: 523 LTDFGLS 529
+TDFGL
Sbjct: 146 ITDFGLC 152
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 72.7 bits (179), Expect = 1e-13
Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 15/162 (9%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLC-H 239
+ E+GRG G V V + SG+ A K + T + K L +LD++ +
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLM-DLDVVMRSSDC 80
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY------TEYDIAHYIRQLLSGL 293
+V+ + + + I EL + Y E + + L
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138
Query: 294 DYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+++ L I H + P ++L+ G ++ L DFG+S ++
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSG--NIKLCDFGISGQLVD 178
Score = 39.2 bits (92), Expect = 0.008
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 17/110 (15%)
Query: 949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP 1007
+ + L +L + H +I+P N+++ RS +KL D G ++ G L+
Sbjct: 128 GKITLATVKALNHLKENLKIIHRDIKPSNILLD--RSGNIKLCDFG----IS--GQLVDS 179
Query: 1008 INTPN----PEFAAPEVLAEEPIFP----QTDVWSAGVLAYVLLSGASPF 1049
I + APE + ++DVWS G+ Y L +G P+
Sbjct: 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
Score = 36.1 bits (84), Expect = 0.064
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 478 TEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
E + + L+++ L I H + P ++L+ G ++ L DFG+S ++
Sbjct: 123 PEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSG--NIKLCDFGISGQLVD 178
Score = 31.5 bits (72), Expect = 1.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
+ E+GRG G V V + SG+ A K +
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI 55
Score = 30.0 bits (68), Expect = 5.0
Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 14/137 (10%)
Query: 588 EWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKL--FEYSHDTLHQVNTEFD 645
E + + + + EI RG + V K K + ++A K Q+ + D
Sbjct: 14 EQHWDFTAEDLKDLGEIGRGAYGSVNKMVHK-PSGQIMAVKRIRSTVDEKEQKQLLMDLD 72
Query: 646 -NLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQG--ADVLSYLSSRHEYT--EQNVA 700
+RS I A + ME + Y+ S + E+ +
Sbjct: 73 VVMRSSDCPYIVQFYGALFREGDCW----ICMELMSTSFDKFYKYVYSVLDDVIPEEILG 128
Query: 701 TIISQAWE--HYLKKNR 715
I + ++LK+N
Sbjct: 129 KITLATVKALNHLKENL 145
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 73.0 bits (180), Expect = 1e-13
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
Y+ ++G+G G V+ A R +G+ A K K L +NE +
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---------KVLMENEKEGFPITALREI 67
Query: 233 -IMNQLCHRNLVRLHD--------SYETKDSFTIISE-----LAGGGELLHSLTRQSYYT 278
I+ L H N+V L + K S ++ + LAG LL ++ + +T
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG---LLSNVLVK--FT 122
Query: 279 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
+I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R +
Sbjct: 123 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNS 180
Query: 339 NPLEY 343
P Y
Sbjct: 181 QPNRY 185
Score = 50.3 bits (121), Expect = 2e-06
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 537
T +I ++ LL+GL Y+HR I H + ++L+ G L L DFGL+R +
Sbjct: 122 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKN 179
Query: 538 LNPLEY 543
P Y
Sbjct: 180 SQPNRY 185
Score = 36.4 bits (85), Expect = 0.051
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 22/113 (19%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH-PINTPNPE 1014
L+GL Y+H + H +++ NV++ R +KL D G L N+
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLIT--RDGVLKLADFG-------LARAFSLAKNSQPNR 184
Query: 1015 FA---------APEVLAEEPIF-PQTDVWSAG-VLAYVLLSGASPFRGQSEPE 1056
+ PE+L E + P D+W AG ++A + + + +G +E
Sbjct: 185 YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAE-MWTRSPIMQGNTEQH 236
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 72.0 bits (177), Expect = 2e-13
Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 10/159 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLC-H 239
D + ELGRG G+V SG+ A K + N K L +LDI +
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLM-DLDISMRTVDC 109
Query: 240 RNLVRLHDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
V + + + I EL + + E + ++ L+++
Sbjct: 110 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 297 H-RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
H +LS+ H + P ++L+ G + + DFG+S +
Sbjct: 170 HSKLSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVD 206
Score = 41.2 bits (97), Expect = 0.002
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 23/119 (19%)
Query: 949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLG-------CTQRVTK 1000
S++ L++LH + H +++P NV++ QVK+ D G +
Sbjct: 156 GKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN--ALGQVKMCDFGISGYLVDSVAKTID 213
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFP----QTDVWSAGVLAYVLLSGASPFRGQSEP 1055
G + APE + E ++D+WS G+ L P+ P
Sbjct: 214 AGC---------KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 263
Score = 36.2 bits (84), Expect = 0.057
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 479 EYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
E + ++ L+++H +LS+ H + P ++L+ G + + DFG+S +
Sbjct: 152 EDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVD 206
Score = 32.7 bits (75), Expect = 0.68
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
D + ELGRG G+V SG+ A K +
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI 84
Score = 31.2 bits (71), Expect = 2.4
Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 30/134 (22%)
Query: 1144 APEVLAEEPIFP----QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF 1199
APE + E ++D+WS G+ L P+ P F+ L
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------------FQQLK 268
Query: 1200 K------------ELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAV 1247
+ + + E F K+ +RPT E ++ + + K + A
Sbjct: 269 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT--LHESKGTDVAS 326
Query: 1248 FLGNRLKEFSDEYH 1261
F+ L + +H
Sbjct: 327 FVKLILGDHHHHHH 340
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 73.2 bits (180), Expect = 2e-13
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
LG+G G V E+++GR YA K++ ++ E ++ H L L
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHPFLTALK 214
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLG 305
S++T D + E A GGEL L+R+ ++E Y +++S LDY+H ++ +
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 274
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
L +L++ G H+ +TDFGL
Sbjct: 275 LKLENLMLDKDG--HIKITDFGLC 296
Score = 59.0 bits (143), Expect = 5e-09
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 23/138 (16%)
Query: 955 VLDGLQYLH-WRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRV-------TKLGTLI 1005
++ L YLH + + + +++ +N+++ +K+ D G C + + T GT
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGT-- 312
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
PE+ APEVL + D W GV+ Y ++ G PF Q + + +
Sbjct: 313 -------PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 365
Query: 1066 YRFEYLFKELTQEATRFL 1083
RF + L EA L
Sbjct: 366 IRFP---RTLGPEAKSLL 380
Score = 53.2 bits (128), Expect = 4e-07
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEVL + D W GV+ Y ++ G PF Q + + + RF + L
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLG 373
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L + K+ P +R
Sbjct: 374 PEAKSLLSGLLKKDPKQR 391
Score = 48.2 bits (115), Expect = 1e-05
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHL 521
GGEL L+R+ ++E Y +++S LDY+H ++ + L +L++ G H+
Sbjct: 231 NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HI 288
Query: 522 LLTDFGLS 529
+TDFGL
Sbjct: 289 KITDFGLC 296
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 71.1 bits (175), Expect = 3e-13
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 10/153 (6%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDI-MNQLCHRNLVRL 245
ELGRG G+V SG+ A K + N K L +LDI M + V
Sbjct: 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLM-DLDISMRTVDCPFTVTF 71
Query: 246 HDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSI 301
+ + + I EL + + E + ++ L+++H +LS+
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
H + P ++L+ G + + DFG+S +
Sbjct: 132 IHRDVKPSNVLINALG--QVKMCDFGISGYLVD 162
Score = 42.2 bits (100), Expect = 6e-04
Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 23/119 (19%)
Query: 949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCT-------QRVTK 1000
S++ L++LH + H +++P NV++ QVK+ D G + +
Sbjct: 112 GKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN--ALGQVKMCDFGISGYLVDDVAKDID 169
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFP----QTDVWSAGVLAYVLLSGASPFRGQSEP 1055
G + APE + E ++D+WS G+ L P+ P
Sbjct: 170 AGC---------KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 219
Score = 36.5 bits (85), Expect = 0.043
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 478 TEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
E + ++ L+++H +LS+ H + P ++L+ G + + DFG+S +
Sbjct: 107 PEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG--QVKMCDFGISGYLVD 162
Score = 31.8 bits (73), Expect = 1.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 64 DELGRGVTGIVYHAVERSSGRNYAAKVMT 92
ELGRG G+V SG+ A K +
Sbjct: 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIR 41
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 71.8 bits (177), Expect = 3e-13
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 191 LGRGVTGIVY---HAVERSSGRNYAAKVM-----TGKGNQYKSLFKNELDIMNQLCHRNL 242
LG+G G V+ ++G+ +A KV+ K E +I+ ++ H +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT-KAERNILEEVKHPFI 83
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
V L +++T +I E GGEL L R+ + E Y+ ++ L ++H+ I
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ L P ++++ H G H+ LTDFGL
Sbjct: 144 YRDLKPENIMLNHQG--HVKLTDFGLC 168
Score = 57.6 bits (140), Expect = 9e-09
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK-------LGTLIHPIN 1009
L +LH +G+ + +++P+N+++ VKL D G C + + GT
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNH--QGHVKLTDFGLCKESIHDGTVTHTFCGT------ 184
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
E+ APE+L D WS G L Y +L+GA PF G++ +T + +
Sbjct: 185 ---IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241
Query: 1070 YLFKELTQEATRFL 1083
LTQEA L
Sbjct: 242 ---PYLTQEARDLL 252
Score = 54.1 bits (131), Expect = 1e-07
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+L D WS G L Y +L+GA PF G++ +T + + LT
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---PYLT 245
Query: 1204 QEATRFLMLIFKRAPGKR 1221
QEA L + KR R
Sbjct: 246 QEARDLLKKLLKRNAASR 263
Score = 50.2 bits (121), Expect = 2e-06
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL L R+ + E Y+ ++ L ++H+ I + L P ++++ H G H+
Sbjct: 104 SGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG--HVK 161
Query: 523 LTDFGLS 529
LTDFGL
Sbjct: 162 LTDFGLC 168
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 71.8 bits (177), Expect = 3e-13
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKN----ELDIMNQL 237
Y+ D LG G VY A ++++ + A K + G ++ K E+ ++ +L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYIRQLLSG 292
H N++ L D++ K + +++ + + L T I Y+ L G
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDF-----METDLEVIIKDNSLVLTPSHIKAYMLMTLQG 124
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
L+Y+H+ I H L P +LL+ G L L DFGL++ SFG
Sbjct: 125 LEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAK---SFG 163
Score = 48.3 bits (116), Expect = 1e-05
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 472 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 531
T I Y+ L GL+Y+H+ I H L P +LL+ G L L DFGL++
Sbjct: 104 DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAK- 160
Query: 532 ITSFG 536
SFG
Sbjct: 161 --SFG 163
Score = 30.6 bits (70), Expect = 3.7
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAK--LFEYSHDTLHQVNT----EFDNLRS 649
+Y+ + + G+F+ V KA +K NT +VA K + + +N E L+
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 650 LRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE-YTEQNVATIISQAWE 708
L H I LL+A+ SNI LV + ++ D+ + T ++ + +
Sbjct: 69 LSHPNIIGLLDAF---GHKSNI-SLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 709 --HYLKKNR 715
YL ++
Sbjct: 124 GLEYLHQHW 132
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 71.4 bits (176), Expect = 3e-13
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
+ LG G G V+ R +GR YA KV+ + Q + +E +++ +
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLMLSIVT 64
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
H ++R+ +++ +I + GGEL L + + Y ++ L+Y+H
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
I + L P ++L+ G H+ +TDFG ++ +
Sbjct: 125 KDIIYRDLKPENILLDKNG--HIKITDFGFAKYV 156
Score = 48.7 bits (117), Expect = 6e-06
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL L + + Y ++ L+Y+H I + L P ++L+ G H+
Sbjct: 89 EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG--HIK 146
Query: 523 LTDFGLSRRI 532
+TDFG ++ +
Sbjct: 147 ITDFGFAKYV 156
Score = 45.6 bits (109), Expect = 7e-05
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 20/121 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ--VKLIDLGCTQRVTKL-----GTLIHP 1007
V L+YLH + + + +++P+N+++ +K+ D G + V + GT
Sbjct: 115 VCLALEYLHSKDIIYRDLKPENILLDK----NGHIKITDFGFAKYVPDVTYTLCGT---- 166
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
P++ APEV++ +P D WS G+L Y +L+G +PF + +T + + R
Sbjct: 167 -----PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR 221
Query: 1068 F 1068
F
Sbjct: 222 F 222
Score = 42.5 bits (101), Expect = 7e-04
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEV++ +P D WS G+L Y +L+G +PF + +T + + RF
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP---PFFN 227
Query: 1204 QEATRFLMLIFKRAPGKR 1221
++ L + R +R
Sbjct: 228 EDVKDLLSRLITRDLSQR 245
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 70.2 bits (173), Expect = 5e-13
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 34/170 (20%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
+ + +++G G G+VY A + +G A K K E +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---------KIRLDTETEGVPSTAIREI 53
Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYI 286
++ +L H N+V+L D T++ ++ E L + + + I Y+
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDAS-ALTGIPLPLIKSYL 109
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADFGLAR---AFG 154
Score = 47.5 bits (114), Expect = 2e-05
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
I Y+ QLL GL + H + H L P +LL+ G + L DFGL+R +FG
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADFGLAR---AFG 154
Score = 31.0 bits (71), Expect = 2.3
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 31/113 (27%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE-------------------PE 1183
APE+L + D+WS G + +++ + F G SE P
Sbjct: 171 APEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 1184 TRQ----NVNFVRY---RFEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+F ++ F + L ++ L ML + P KR + +
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD--PNKRISAKAA 281
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 71.6 bits (175), Expect = 9e-13
Identities = 30/149 (20%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
LG+G G V + + + YA K++ K + + D+ + +
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILK------KDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
L +LH ++T D + E GG+L++ + + + E Y ++ GL ++
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
I + L ++++ G H+ + DFG+
Sbjct: 463 IIYRDLKLDNVMLDSEG--HIKIADFGMC 489
Score = 67.4 bits (164), Expect = 2e-11
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
+ GL +L +G+ + +++ DNV++ S +K+ D G C K I T
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMC-----KEN--IWDGVTTKT 501
Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
P++ APE++A +P D W+ GVL Y +L+G +PF G+ E E Q++ +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 1069 EYLFKELTQEATRFL 1083
K +++EA
Sbjct: 562 P---KSMSKEAVAIC 573
Score = 55.4 bits (133), Expect = 1e-07
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE++A +P D W+ GVL Y +L+G +PF G+ E E Q++ + K ++
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP---KSMS 566
Query: 1204 QEATRFLMLIFKRAPGKR 1221
+EA + + PGKR
Sbjct: 567 KEAVAICKGLMTKHPGKR 584
Score = 48.1 bits (114), Expect = 2e-05
Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG+L++ + + + E Y ++ GL ++ I + L ++++ G H+
Sbjct: 425 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG--HIK 482
Query: 523 LTDFGLS 529
+ DFG+
Sbjct: 483 IADFGMC 489
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 69.5 bits (171), Expect = 1e-12
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----------ELD 232
+ ++LG G VY + +++G A K + + E+
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALK---------EVKLDSEEGTPSTAIREIS 55
Query: 233 IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYIR 287
+M +L H N+VRL+D T++ T++ E L + + ++
Sbjct: 56 LMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW 115
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
QLL GL + H I H L P +LL+ G L L DFGL+R
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLINKRG--QLKLGDFGLAR 156
Score = 46.4 bits (111), Expect = 3e-05
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
D+K + D+ L + ++ QLL GL + H I H L P
Sbjct: 88 DLKKYMDSRTVGNTPRGL----------ELNLVKYFQWQLLQGLAFCHENKILHRDLKPQ 137
Query: 510 DLLVAHPGGRHLLLTDFGLSR 530
+LL+ G L L DFGL+R
Sbjct: 138 NLLINKRG--QLKLGDFGLAR 156
Score = 33.7 bits (78), Expect = 0.36
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L GL + H + H +++P N+++ + Q+KL D G L P F
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLIN--KRGQLKLGDFG----------LARAFGIPVNTF 165
Query: 1016 A---------APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
+ AP+VL + D+WS G + +++G F G ++ E
Sbjct: 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 68.7 bits (169), Expect = 1e-12
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
Y+ +++G G G V+ A R + A K + ++ +
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALK---------RVRLDDDDEGVPSSALREI 52
Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYI 286
++ +L H+N+VRLHD + T++ E L S + ++
Sbjct: 53 CLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKK---YFDS--CNGDLDPEIVKSFL 107
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
QLL GL + H ++ H L P +LL+ G L L +FGL+R
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANFGLAR 149
Score = 46.7 bits (112), Expect = 2e-05
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
+ ++ QLL GL + H ++ H L P +LL+ G L L +FGL+R
Sbjct: 99 DPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANFGLAR 149
Score = 29.4 bits (67), Expect = 6.6
Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 32/114 (28%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASP-FRGQSE-------------------P 1182
P+VL ++ D+WSAG + L + P F G P
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228
Query: 1183 ETRQNVNFVRY-------RFEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+ ++ Y + +L L +L P +R + EE
Sbjct: 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCN--PVQRISAEEA 280
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 69.6 bits (171), Expect = 1e-12
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
+GRG V + + R YA KV+ K L ++ DI ++
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVK------KELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
LV LH ++T+ + E GG+L+ + RQ E Y ++ L+Y+H
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
I + L ++L+ G H+ LTD+G+
Sbjct: 131 IIYRDLKLDNVLLDSEG--HIKLTDYGMC 157
Score = 60.7 bits (148), Expect = 1e-09
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN---- 1012
L YLH RG+ + +++ DNV++ S +KL D G C K G + P +T +
Sbjct: 122 ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMC-----KEG--LRPGDTTSTFCG 172
Query: 1013 -PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
P + APE+L E D W+ GVL + +++G SPF +
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 223
Score = 48.4 bits (116), Expect = 8e-06
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG+L+ + RQ E Y ++ L+Y+H I + L ++L+ G H+
Sbjct: 93 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIK 150
Query: 523 LTDFGLS 529
LTD+G+
Sbjct: 151 LTDYGMC 157
Score = 48.0 bits (115), Expect = 1e-05
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF---- 1199
APE+L E D W+ GVL + +++G SPF + +YLF
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT-----EDYLFQVIL 232
Query: 1200 -------KELTQEATRFLMLIFKRAPGKR 1221
+ L+ +A L + P +R
Sbjct: 233 EKQIRIPRSLSVKAASVLKSFLNKDPKER 261
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 69.2 bits (170), Expect = 2e-12
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 31/163 (19%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----------ELD 232
+ Y D+LG G VY + + A K + ++ E+
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALK---------EIRLEHEEGAPCTAIREVS 52
Query: 233 IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYIR 287
++ L H N+V LHD T+ S T++ E L L + +++ ++
Sbjct: 53 LLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQ---YLDD--CGNIINMHNVKLFLF 107
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
QLL GL Y HR + H L P +LL+ G L L DFGL+R
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERG--ELKLADFGLAR 148
Score = 46.4 bits (111), Expect = 3e-05
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 472 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
+ +++ ++ QLL GL Y HR + H L P +LL+ G L L DFGL+R
Sbjct: 92 DCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG--ELKLADFGLAR 148
Score = 33.7 bits (78), Expect = 0.41
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L GL Y H + + H +++P N+++ ++KL D G L + P +
Sbjct: 110 LRGLAYCHRQKVLHRDLKPQNLLIN--ERGELKLADFG----------LARAKSIPTKTY 157
Query: 1016 A---------APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
P++L + Q D+W G + Y + +G F G + E
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
Score = 30.3 bits (69), Expect = 4.2
Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 32/114 (28%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE-------------------PE 1183
P++L + Q D+W G + Y + +G F G + P
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 227
Query: 1184 TRQNVNFVRYRF--------EYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
N F Y + L + L +L F+ R + E+
Sbjct: 228 ILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFE--GRNRISAEDA 279
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 69.2 bits (170), Expect = 2e-12
Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT---GKGNQYKSLFKNELDIMNQLCHRN 241
Y +GRG G VY A + R A K+M+ +++ + E +L +
Sbjct: 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPH 95
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+V +HD E + L G +L L RQ +RQ+ S LD H
Sbjct: 96 VVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGA 155
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
H + P ++LV+ L DFG++ T
Sbjct: 156 THRDVKPENILVSADD--FAYLVDFGIASATTDEK 188
Score = 61.5 bits (150), Expect = 5e-10
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 20/111 (18%)
Query: 952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---------CTQRVTKLG 1002
V + L H G H +++P+N++++ L+D G TQ +G
Sbjct: 140 VRQIGSALDAAHAAGATHRDVKPENILVS--ADDFAYLVDFGIASATTDEKLTQLGNTVG 197
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
T + APE +E + D+++ + Y L+G+ P++G
Sbjct: 198 T---------LYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
Score = 40.7 bits (96), Expect = 0.002
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 483 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
+RQ+ S LD H H + P ++LV+ L DFG++ T
Sbjct: 137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADD--FAYLVDFGIASATTDEK 188
Score = 39.9 bits (94), Expect = 0.004
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1180
APE +E + D+++ + Y L+G+ P++G
Sbjct: 203 APERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 69.6 bits (171), Expect = 2e-12
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
LG+G G V A + +G YA KV+ K + + D+ + +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLK------KDVILQDDDVECTMTEKRILSLARNHP 84
Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
L +L ++T D + E GG+L+ + + + E Y +++S L ++H
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG 144
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
I + L ++L+ H G H L DFG+
Sbjct: 145 IIYRDLKLDNVLLDHEG--HCKLADFGMC 171
Score = 63.4 bits (155), Expect = 1e-10
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
++ L +LH +G+ + +++ DNV++ KL D G C K G I T
Sbjct: 133 IISALMFLHDKGIIYRDLKLDNVLLDH--EGHCKLADFGMC-----KEG--ICNGVTTAT 183
Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
P++ APE+L E P D W+ GVL Y +L G +PF ++E + + + +
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY 243
Query: 1069 EYLFKELTQEATRFL 1083
L ++AT L
Sbjct: 244 P---TWLHEDATGIL 255
Score = 52.6 bits (127), Expect = 4e-07
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE+L E P D W+ GVL Y +L G +PF ++E + + + + L
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP---TWLH 248
Query: 1204 QEATRFLMLIFKRAPGKR 1221
++AT L + P R
Sbjct: 249 EDATGILKSFMTKNPTMR 266
Score = 48.8 bits (117), Expect = 6e-06
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG+L+ + + + E Y +++S L ++H I + L ++L+ H G H
Sbjct: 107 NGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG--HCK 164
Query: 523 LTDFGLS 529
L DFG+
Sbjct: 165 LADFGMC 171
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 69.7 bits (171), Expect = 2e-12
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
+GRG V + + R YA +V+ K L ++ DI ++
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVK------KELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
LV LH ++T+ + E GG+L+ + RQ E Y ++ L+Y+H
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
I + L ++L+ G H+ LTD+G+
Sbjct: 174 IIYRDLKLDNVLLDSEG--HIKLTDYGMC 200
Score = 60.1 bits (146), Expect = 2e-09
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN---- 1012
L YLH RG+ + +++ DNV++ S +KL D G C K G + P +T +
Sbjct: 165 ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMC-----KEG--LRPGDTTSTFCG 215
Query: 1013 -PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
P + APE+L E D W+ GVL + +++G SPF +
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 266
Score = 48.5 bits (116), Expect = 1e-05
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG+L+ + RQ E Y ++ L+Y+H I + L ++L+ G H+
Sbjct: 136 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIK 193
Query: 523 LTDFGLS 529
LTD+G+
Sbjct: 194 LTDYGMC 200
Score = 47.7 bits (114), Expect = 2e-05
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF---- 1199
APE+L E D W+ GVL + +++G SPF + +YLF
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT-----EDYLFQVIL 275
Query: 1200 -------KELTQEATRFLMLIFKRAPGKR 1221
+ L+ +A L + P +R
Sbjct: 276 EKQIRIPRSLSVKAASVLKSFLNKDPKER 304
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 69.7 bits (171), Expect = 2e-12
Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 26/197 (13%)
Query: 164 SYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY 223
S T + +P +Y +G G G+VY A SG A K K Q
Sbjct: 35 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQD 90
Query: 224 KSLFKN-ELDIMNQLCHRNLVRLHDS-YETKDSFT-----IISELAGGGELLHSLTRQSY 276
K FKN EL IM +L H N+VRL Y + + ++ + E ++ + R
Sbjct: 91 KR-FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYS 147
Query: 277 Y-----TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
+ Y+ QL L Y+H I H + P +LL+ P L L DFG ++
Sbjct: 148 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAK- 205
Query: 332 ITSFGKLNPLEYDVRYV 348
+L E +V Y+
Sbjct: 206 -----QLVRGEPNVSYI 217
Score = 40.8 bits (96), Expect = 0.002
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
Y+ QL L Y+H I H + P +LL+ P L L DFG ++++
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR 209
Score = 37.8 bits (88), Expect = 0.023
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-LFEYSHDTLHQVNTEFDNLRSLR 651
P Y I G F VV +A + E LVA K + + N E +R L
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGE-LVAIKKVLQDKRFK----NRELQIMRKLD 105
Query: 652 HERIASLLEAYKPSTTASNIAVL--VME 677
H I L + S + L V++
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLD 133
Score = 37.0 bits (86), Expect = 0.038
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L Y+H G+CH +I+P N+++ + +KL D G +++ + PN +
Sbjct: 166 FRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVR--------GEPNVSY 216
Query: 1016 A------APEVL--AEE---PIFPQTDVWSAG-VLAYVLLSGASPFRGQSE 1054
APE++ A + I DVWSAG VLA LL G F G S
Sbjct: 217 ICSRYYRAPELIFGATDYTSSI----DVWSAGCVLAE-LLLGQPIFPGDSG 262
Score = 33.1 bits (76), Expect = 0.66
Identities = 32/118 (27%), Positives = 41/118 (34%), Gaps = 41/118 (34%)
Query: 1144 APEVL--AEE---PIFPQTDVWSAG-VLAYVLLSGASPFRGQSE-------------PET 1184
APE++ A + I DVWSAG VLA LL G F G S P
Sbjct: 224 APELIFGATDYTSSI----DVWSAGCVLAE-LLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278
Query: 1185 RQ----NVNFVRYRF---------EYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
Q N N+ ++F + EA +L + P R T E
Sbjct: 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY--TPTARLTPLEA 334
Score = 29.7 bits (67), Expect = 6.9
Identities = 14/51 (27%), Positives = 19/51 (37%)
Query: 39 SYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK 89
S T + +P +Y +G G G+VY A SG A K
Sbjct: 35 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 85
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 68.8 bits (169), Expect = 3e-12
Identities = 30/149 (20%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
LG+G G V + + + YA K++ K + + D+ + +
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILK------KDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
L +LH ++T D + E GG+L++ + + + E Y ++ GL ++
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
I + L ++++ G H+ + DFG+
Sbjct: 142 IIYRDLKLDNVMLDSEG--HIKIADFGMC 168
Score = 64.2 bits (157), Expect = 9e-11
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
+ GL +L +G+ + +++ DNV++ S +K+ D G C K I T
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMC-----KEN--IWDGVTTKT 180
Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
P++ APE++A +P D W+ GVL Y +L+G +PF G+ E E Q++ +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 1069 EYLFKELTQEATRFL 1083
K +++EA
Sbjct: 241 P---KSMSKEAVAIC 252
Score = 53.8 bits (130), Expect = 2e-07
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APE++A +P D W+ GVL Y +L+G +PF G+ E E Q++ + K ++
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP---KSMS 245
Query: 1204 QEATRFLMLIFKRAPGKR 1221
+EA + + PGKR
Sbjct: 246 KEAVAICKGLMTKHPGKR 263
Score = 47.6 bits (114), Expect = 2e-05
Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG+L++ + + + E Y ++ GL ++ I + L ++++ G H+
Sbjct: 104 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG--HIK 161
Query: 523 LTDFGLS 529
+ DFG+
Sbjct: 162 IADFGMC 168
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 68.4 bits (168), Expect = 3e-12
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 31/163 (19%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
LG G G VY + G A K + + +E +M + + +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
+ RL + +I++L G LL + + + ++ Q+ G++Y+
Sbjct: 79 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
HR DL LV P +H+ +TDFGL++ +
Sbjct: 138 LVHR-----------DLAARNVLVKTP--QHVKITDFGLAKLL 167
Score = 33.0 bits (76), Expect = 0.68
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
A E + I+ Q+DVWS GV + L++ G+ P+ G E +
Sbjct: 187 ALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
Score = 33.0 bits (76), Expect = 0.68
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A E + I+ Q+DVWS GV + L++ G+ P+ G E +
Sbjct: 187 ALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
Score = 31.1 bits (71), Expect = 2.2
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 25/82 (30%)
Query: 463 PGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRLSIAHLGLTPGDL---- 511
P G LL + + + ++ Q+ G++Y+ HR DL
Sbjct: 99 PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR-----------DLAARN 147
Query: 512 -LVAHPGGRHLLLTDFGLSRRI 532
LV P +H+ +TDFGL++ +
Sbjct: 148 VLVKTP--QHVKITDFGLAKLL 167
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 68.4 bits (168), Expect = 3e-12
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-H 239
D Y +LGRG V+ A+ ++ K++ K K E+ I+ L
Sbjct: 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK---PVKKKKIKREIKILENLRGG 90
Query: 240 RNLVRLHDSYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
N++ L D + S T + + L + T+YDI Y+ ++L LDY
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNN--TDFKQLYQT--LTDYDIRFYMYEILKALDYC 146
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
H + I H + P ++++ H R L L D+GL+
Sbjct: 147 HSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 179
Score = 49.6 bits (119), Expect = 4e-06
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
T+YDI Y+ ++L LDY H + I H + P ++++ H R L L D+GL+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 179
Score = 41.9 bits (99), Expect = 0.001
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L L Y H G+ H +++P N VM +++LID G L HP N
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQEYNVR 190
Query: 1015 FA-----APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASP-FRGQSEPETRQNVNFVRY- 1066
A PE+L + ++ + D+WS G + ++ P F G + Q V +
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVRIAKVL 248
Query: 1067 ----RFEYLFKELTQEATRFLMLIFKHE-VDWITLANN 1099
++Y+ K + RF ++ +H W ++
Sbjct: 249 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 286
Score = 37.6 bits (88), Expect = 0.021
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 576 PPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD 635
P + E +EW D YQ + ++ RGK+S V +A N E +V L
Sbjct: 19 PREYWDYESHVVEWGN---QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK 75
Query: 636 TLHQVNTEFDNLRSLR-HERIASLLEAYKPSTTASNIAVLVMEKLQGAD 683
++ E L +LR I +L + K S LV E + D
Sbjct: 76 ---KIKREIKILENLRGGPNIITLADIVKDPV--SRTPALVFEHVNNTD 119
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 68.9 bits (169), Expect = 3e-12
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 30/202 (14%)
Query: 164 SYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY 223
S + R++ D + G+G G V E+S+G + A K K Q
Sbjct: 4 SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK----KVIQD 59
Query: 224 KSLFKNELDIMNQLC---HRNLVRLHDSYETKDS-------FTIISELAGGGELLHSLTR 273
EL IM L H N+V+L + T ++ E + LH R
Sbjct: 60 PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV--PDTLHRCCR 117
Query: 274 QSYYTEYDI--AH---YIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDF 326
Y + ++ QL+ + +H S + H + P ++LV + L L DF
Sbjct: 118 NYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-NEADGTLKLCDF 176
Query: 327 GLSRRITSFGKLNPLEYDVRYV 348
G ++ KL+P E +V Y+
Sbjct: 177 GSAK------KLSPSEPNVAYI 192
Score = 38.0 bits (89), Expect = 0.018
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 485 YIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
++ QL+ + +H S + H + P ++LV + L L DFG +++++
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-NEADGTLKLCDFGSAKKLSP 184
Score = 33.0 bits (76), Expect = 0.55
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 28/113 (24%)
Query: 956 LDGLQYLHWR--GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
+ + LH +CH +I+P NV + + +KL D G ++++ + I
Sbjct: 139 IRSIGCLHLPSVNVCHRDIKPHNV-LVNEADGTLKLCDFGSAKKLSPSEPNVAYI----- 192
Query: 1014 EFA-----APEVLAEEPIF------PQTDVWSAG-VLAYVLLSGASPFRGQSE 1054
APE+ IF D+WS G + A ++ G FRG +
Sbjct: 193 --CSRYYRAPEL-----IFGNQHYTTAVDIWSVGCIFAE-MMLGEPIFRGDNS 237
Score = 32.6 bits (75), Expect = 0.82
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 12/94 (12%)
Query: 591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-LFE---YSHDTLHQVNTEFDN 646
+ D++Q +G F V EK +T VA K + + + + L +
Sbjct: 18 SRKEMDRFQVERMAGQGTFGTVQLGKEK-STGMSVAIKKVIQDPRFRNRELQ----IMQD 72
Query: 647 LRSLRHERIASLLEAYKPSTTASNIAV---LVME 677
L L H I L + + +VME
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106
Score = 32.3 bits (74), Expect = 0.96
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 39 SYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK 89
S + R++ D + G+G G V E+S+G + A K
Sbjct: 4 SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK 54
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 67.7 bits (166), Expect = 4e-12
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLVR 244
G +G G G VY + A K++ + L FKNE+ ++ + H N++
Sbjct: 28 VGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 245 LHDSYETKDSFTIISELAGGG---ELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
Y T I+++ G LH+ + DIA RQ G+DY+H S
Sbjct: 85 FM-GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA---RQTARGMDYLHAKS 140
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
I H L ++ + + + DFGL+
Sbjct: 141 IIHRDLKSNNIFLHE--DNTVKIGDFGLAT 168
Score = 48.8 bits (117), Expect = 5e-06
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN--PEF 1015
G+ YLH + + H +++ +N+ + VK+ D G + H + +
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHE--DNTVKIGDFG-LATEKSRWSGSHQFEQLSGSILW 188
Query: 1016 AAPEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPE 1056
APEV+ + P + DV++ G++ Y L++G P+ + +
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
Score = 38.0 bits (89), Expect = 0.013
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 1144 APEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPE 1183
APEV+ + P + DV++ G++ Y L++G P+ + +
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
Score = 36.1 bits (84), Expect = 0.063
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 463 PGG---ELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
G LH+ + DIA RQ G+DY+H SI H L ++ +
Sbjct: 102 EGSSLYHHLHASETKFEMKKLIDIA---RQTARGMDYLHAKSIIHRDLKSNNIFLHE--D 156
Query: 519 RHLLLTDFGLSRRITSFGKLNPLEYGNGQYK 549
+ + DFGL+ + + + E +G
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Score = 32.7 bits (75), Expect = 0.78
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 14/112 (12%)
Query: 584 DSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQV 640
D+ +W E P + I G F V K K + + VA K+ + L
Sbjct: 14 DAADDW--EIPDGQITVGQRIGSGSFGTVYKG--KWHGD--VAVKMLNVTAPTPQQLQAF 67
Query: 641 NTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRH 692
E LR RH I + +TA +A+ V + +G+ + +L +
Sbjct: 68 KNEVGVLRKTRHVNILLFMGY----STAPQLAI-VTQWCEGSSLYHHLHASE 114
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 67.8 bits (166), Expect = 4e-12
Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 23/155 (14%)
Query: 186 DFGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGKGNQYKSL--FKNELDIMNQLCH 239
+ G+ +G+G G VYH + A +++ + + L FK E+ Q H
Sbjct: 36 EIGELIGKGRFGQVYHGR-------WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDY 295
N+V + + II+ L G L + IA ++++ G+ Y
Sbjct: 89 ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIA---QEIVKGMGY 145
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
+H I H L ++ + +++TDFGL
Sbjct: 146 LHAKGILHKDLKSKNVFYDN---GKVVITDFGLFS 177
Score = 44.7 bits (106), Expect = 1e-04
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 20/111 (18%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVTKLGTLIHPINTP 1011
G+ YLH +G+ H +++ NV + + V + D G Q + L
Sbjct: 142 GMGYLHAKGILHKDLKSKNVFYDNGK---VVITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 1012 NPEFAAPEVLAEEPIFPQT---------DVWSAGVLAYVLLSGASPFRGQS 1053
APE++ + + DV++ G + Y L + PF+ Q
Sbjct: 199 --CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247
Score = 34.3 bits (79), Expect = 0.27
Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 10/72 (13%)
Query: 463 PGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
G L + IA ++++ G+ Y+H I H L ++ +
Sbjct: 112 KGRTLYSVVRDAKIVLDVNKTRQIA---QEIVKGMGYLHAKGILHKDLKSKNVFYDN--- 165
Query: 519 RHLLLTDFGLSR 530
+++TDFGL
Sbjct: 166 GKVVITDFGLFS 177
Score = 32.7 bits (75), Expect = 0.67
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 9/46 (19%)
Query: 1144 APEVLAEEPIFPQT---------DVWSAGVLAYVLLSGASPFRGQS 1180
APE++ + + DV++ G + Y L + PF+ Q
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 66.8 bits (164), Expect = 1e-11
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 19/150 (12%)
Query: 191 LGRGVTGIVY---HAVERSSGRNYAAKVMTGKGNQYKSLF--------KNELDIMNQLCH 239
LG+G G V+ + + YA KV+ K+ K E DI+ ++ H
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLK------KATLKVRDRVRTKMERDILVEVNH 85
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
+V+LH +++T+ +I + GG+L L+++ +TE D+ Y+ +L LD++H L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
I + L P ++L+ G H+ LTDFGLS
Sbjct: 146 GIIYRDLKPENILLDEEG--HIKLTDFGLS 173
Score = 57.6 bits (140), Expect = 9e-09
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 26/136 (19%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQ--VKLIDLG-CTQRVTK-------LGTLIHP 1007
L +LH G+ + +++P+N+++ + +KL D G + + GT
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDE----EGHIKLTDFGLSKESIDHEKKAYSFCGT---- 189
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
E+ APEV+ D WS GVL + +L+G PF+G+ ET + +
Sbjct: 190 -----VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 1068 FEYLFKELTQEATRFL 1083
+ L+ EA L
Sbjct: 245 MP---QFLSPEAQSLL 257
Score = 54.1 bits (131), Expect = 1e-07
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
APEV+ D WS GVL + +L+G PF+G+ ET + + + L+
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP---QFLS 250
Query: 1204 QEATRFLMLIFKRAPGKR 1221
EA L ++FKR P R
Sbjct: 251 PEAQSLLRMLFKRNPANR 268
Score = 51.0 bits (123), Expect = 1e-06
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG+L L+++ +TE D+ Y+ +L LD++H L I + L P ++L+ G H+
Sbjct: 109 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIK 166
Query: 523 LTDFGLS 529
LTDFGLS
Sbjct: 167 LTDFGLS 173
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 66.9 bits (164), Expect = 1e-11
Identities = 29/149 (19%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
LG+G G V+ A + + + +A K + K + + D+ + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALK------KDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
L + +++TK++ + E GG+L++ + + Y +++ GL ++H
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
I + L ++L+ G H+ + DFG+
Sbjct: 139 IVYRDLKLDNILLDKDG--HIKIADFGMC 165
Score = 63.8 bits (156), Expect = 1e-10
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 22/137 (16%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
++ GLQ+LH +G+ + +++ DN+++ +K+ D G C K + N
Sbjct: 127 IILGLQFLHSKGIVYRDLKLDNILLDK--DGHIKIADFGMC-----KEN--MLGDAKTNT 177
Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRY 1066
P++ APE+L + D WS GVL Y +L G SPF GQ E E ++ Y
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY 237
Query: 1067 RFEYLFKELTQEATRFL 1083
+ L +EA L
Sbjct: 238 P-----RWLEKEAKDLL 249
Score = 53.4 bits (129), Expect = 2e-07
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYRFEYLFKE 1201
APE+L + D WS GVL Y +L G SPF GQ E E ++ Y +
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP-----RW 240
Query: 1202 LTQEATRFLMLIFKRAPGKR 1221
L +EA L+ +F R P KR
Sbjct: 241 LEKEAKDLLVKLFVREPEKR 260
Score = 46.8 bits (112), Expect = 3e-05
Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GG+L++ + + Y +++ GL ++H I + L ++L+ G H+
Sbjct: 101 NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--HIK 158
Query: 523 LTDFGLS 529
+ DFG+
Sbjct: 159 IADFGMC 165
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 66.2 bits (162), Expect = 1e-11
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 27/185 (14%)
Query: 164 SYRTYARGRQVKTRTKPIT-----DAYD-------FGDELGRGVTGIVYHAVERSSGRNY 211
S+ + G Q K + +P ++ +G G G VY +
Sbjct: 5 SHHHHHHGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG---DV 61
Query: 212 AAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG---E 266
A K++ + F+NE+ ++ + H N++ Y TKD+ I+++ G +
Sbjct: 62 AVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM-GYMTKDNLAIVTQWCEGSSLYK 120
Query: 267 LLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD 325
LH + + DIA RQ G+DY+H +I H + ++ + G + + D
Sbjct: 121 HLHVQETKFQMFQLIDIA---RQTAQGMDYLHAKNIIHRDMKSNNIFLHE--GLTVKIGD 175
Query: 326 FGLSR 330
FGL+
Sbjct: 176 FGLAT 180
Score = 46.6 bits (111), Expect = 3e-05
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN--PEF 1015
G+ YLH + + H +++ +N+ + + VK+ D G V + + P +
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLHE--GLTVKIGDFG-LATVKSRWSGSQQVEQPTGSVLW 200
Query: 1016 AAPEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPE 1056
APEV+ + P + DV+S G++ Y L++G P+ + +
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
Score = 38.1 bits (89), Expect = 0.015
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 1144 APEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPE 1183
APEV+ + P + DV+S G++ Y L++G P+ + +
Sbjct: 202 APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
Score = 35.0 bits (81), Expect = 0.13
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 463 PGG---ELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
G + LH + + DIA RQ G+DY+H +I H + ++ + G
Sbjct: 114 EGSSLYKHLHVQETKFQMFQLIDIA---RQTAQGMDYLHAKNIIHRDMKSNNIFLHE--G 168
Query: 519 RHLLLTDFGLSRRITSFGKLNPLEYGNGQYK 549
+ + DFGL+ + + +E G
Sbjct: 169 LTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Score = 30.8 bits (70), Expect = 2.7
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 14/112 (12%)
Query: 583 EDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQ 639
DS W E + + I G F V K K + + VA K+ + + +
Sbjct: 25 RDSSYYW--EIEASEVMLSTRIGSGSFGTVYKG--KWHGD--VAVKILKVVDPTPEQFQA 78
Query: 640 VNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR 691
E LR RH I + T N+A +V + +G+ + +L +
Sbjct: 79 FRNEVAVLRKTRHVNILLFMGY----MTKDNLA-IVTQWCEGSSLYKHLHVQ 125
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 67.0 bits (164), Expect = 1e-11
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
+ + Y +G G G V A + +G A K ++ F++ EL
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRTYREL 79
Query: 232 DIMNQLCHRNLVRLHD---SYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHY 285
++ + H N++ L D + + F +++ L G L+++ + T+ +
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFL 137
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
I Q+L GL Y+H I H L P +L V L + DFGL+R
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTADE 185
Score = 45.0 bits (107), Expect = 1e-04
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+++ + T+ + I Q+L GL Y+H I H L P +L V L + DFG
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDFG 177
Query: 528 LSRRITSF 535
L+R
Sbjct: 178 LARHTADE 185
Score = 33.5 bits (77), Expect = 0.45
Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 33/115 (28%)
Query: 1144 APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS---------------EPETRQN 1187
APE++ + QT D+WS G + LL+G + F G E +
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256
Query: 1188 V------NFVRYR-------FEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+ N+++ F +F A L ML+ KR T +
Sbjct: 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVL--DSDKRITAAQA 309
Score = 30.0 bits (68), Expect = 5.2
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L GL+Y+H + H +++P N+ + ++K++D G L T
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFG-------LARHTADEMTGYVA 191
Query: 1015 ---FAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
+ APE++ + QT D+WS G + LL+G + F G
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 65.6 bits (161), Expect = 2e-11
Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 33/164 (20%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
+ Y +++G G G+VY A G +A K K + E +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALK---------KIRLEKEDEGIPSTTIREI 51
Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYI 286
I+ +L H N+V+L+D TK ++ E L L + ++
Sbjct: 52 SILKELKHSNIVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
QLL+G+ Y H + H L P +LL+ G L + DFGL+R
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR 148
Score = 47.9 bits (115), Expect = 9e-06
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
++ QLL+G+ Y H + H L P +LL+ G L + DFGL+R
Sbjct: 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR 148
Score = 34.0 bits (79), Expect = 0.24
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L+G+ Y H R + H +++P N+++ R ++K+ D G L P ++
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLIN--REGELKIADFG----------LARAFGIPVRKY 157
Query: 1016 A---------APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
AP+VL + D+WS G + +++G F G SE +
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
Score = 30.6 bits (70), Expect = 3.2
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 31/113 (27%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE-------------------PE 1183
AP+VL + D+WS G + +++G F G SE P
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 1184 TRQ----NVNFVRY---RFEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+ + NF Y +E K L + L ML P +R T ++
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLD--PNQRITAKQA 278
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 66.1 bits (162), Expect = 2e-11
Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 34/167 (20%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
D Y +LG G G VY A++ + A K + ++E +
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIK---------RIRLEHEEEGVPGTAIREV 84
Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYI 286
++ +L HRN++ L +I E L + + I ++
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKK---YMDKNPD---VSMRVIKSFL 138
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH---LLLTDFGLSR 330
QL++G+++ H H L P +LL++ L + DFGL+R
Sbjct: 139 YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
Score = 44.9 bits (107), Expect = 1e-04
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH---LLLTDFGLSR 530
+ I ++ QL++G+++ H H L P +LL++ L + DFGL+R
Sbjct: 130 SMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 66.8 bits (163), Expect = 2e-11
Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 26/200 (13%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD-------- 232
I D Y+ +G G G V A ++ R A K + +F++ +D
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL-------RVFEDLIDCKRILREI 103
Query: 233 -IMNQLCHRNLVRLHD-----SYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHY 285
I+N+L H ++V++ D E D ++ E+A L R Y TE I
Sbjct: 104 AILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTL 161
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDV 345
+ LL G+ Y+H I H L P + LV + + DFGL+R + N
Sbjct: 162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDC--SVKVCDFGLARTVDYPENGNSQLPIS 219
Query: 346 RYVRQALRHPWLNFADRKPT 365
+ + + K
Sbjct: 220 PREDDMNLVTFPHTKNLKRQ 239
Score = 42.1 bits (99), Expect = 0.001
Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 29/167 (17%)
Query: 553 TPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVV 612
+H + ++ S+ +W D+Y+ I G + V
Sbjct: 13 NSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQI---PDRYEIRHLIGTGSYGHV 69
Query: 613 VKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDN-------------LRSLRHERIASLL 659
+A +K + +VA K ++ F++ L L H+ + +L
Sbjct: 70 CEAYDK-LEKRVVAIK----------KILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 660 EAYKPSTTASNIAV-LVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ P + +V+E + +D + TE ++ T++
Sbjct: 119 DIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYN 164
Score = 39.4 bits (92), Expect = 0.008
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 468 LHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
L R Y TE I + LL G+ Y+H I H L P + LV + + DF
Sbjct: 143 FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC--SVKVCDF 200
Query: 527 GLSRRITS 534
GL+R +
Sbjct: 201 GLARTVDY 208
Score = 30.2 bits (68), Expect = 4.6
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK 89
I D Y+ +G G G V A ++ R A K
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK 84
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 65.8 bits (161), Expect = 2e-11
Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 191 LGRGVTGIVY---HAVERSSGRNYAAKVM-----TGKGNQYKSLFKNELDIMNQLCHRN- 241
LG G G V+ +G+ YA KV+ K + + E ++ +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT-RTERQVLEHIRQSPF 120
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
LV LH +++T+ +I + GGEL L+++ +TE+++ Y+ +++ L+++H+L I
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI 180
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
+ + ++L+ G H++LTDFGLS
Sbjct: 181 IYRDIKLENILLDSNG--HVVLTDFGLS 206
Score = 50.0 bits (120), Expect = 3e-06
Identities = 22/67 (32%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL L+++ +TE+++ Y+ +++ L+++H+L I + + ++L+ G H++
Sbjct: 142 NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVV 199
Query: 523 LTDFGLS 529
LTDFGLS
Sbjct: 200 LTDFGLS 206
Score = 49.2 bits (118), Expect = 5e-06
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQ--VKLIDLG-CTQRVTKLGTLIHPINTPN-- 1012
L++LH G+ + +I+ +N+++ S V L D G K +
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDS----NGHVVLTDFGLS-----KEFVADETERAYDFC 221
Query: 1013 --PEFAAPEVLAEEPIFPQTDV--WSAGVLAYVLLSGASPFRGQSEPETRQ 1059
E+ AP+++ V WS GVL Y LL+GASPF E ++
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272
Score = 45.4 bits (108), Expect = 9e-05
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 19/89 (21%)
Query: 1144 APEVLAEEPIFPQTDV--WSAGVLAYVLLSGASPFRGQSEPETR---------QNVNFVR 1192
AP+++ V WS GVL Y LL+GASPF E ++ + +
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287
Query: 1193 YRFEYLFKELTQEATRFLMLIFKRAPGKR 1221
++ A + + + P KR
Sbjct: 288 E--------MSALAKDLIQRLLMKDPKKR 308
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 66.1 bits (162), Expect = 2e-11
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMNQLC-HRNLVRL 245
+G+G G V A ++ YA KV+ K + K + +E +++ + H LV L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI-MSERNVLLKNVKHPFLVGL 104
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
H S++T D + + GGEL + L R+ + E Y ++ S L Y+H L+I +
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRD 164
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
L P ++L+ G H++LTDFGL
Sbjct: 165 LKPENILLDSQG--HIVLTDFGLC 186
Score = 59.2 bits (144), Expect = 3e-09
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 958 GLQYLHWRGLCHLNIEPDNVVMASVRSVQ--VKLIDLG-CTQRVTKLGTLIHPINTPN-- 1012
L YLH + + +++P+N+++ S Q + L D G C K I +T +
Sbjct: 151 ALGYLHSLNIVYRDLKPENILLDS----QGHIVLTDFGLC-----KEN--IEHNSTTSTF 199
Query: 1013 ---PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYR 1067
PE+ APEVL ++P D W G + Y +L G PF ++ E N+ ++ +
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 259
Query: 1068 FEYLFKELTQEATRFL 1083
+T A L
Sbjct: 260 -----PNITNSARHLL 270
Score = 53.4 bits (129), Expect = 2e-07
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYRFEYLFKE 1201
APEVL ++P D W G + Y +L G PF ++ E N+ ++ +
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK-----PN 261
Query: 1202 LTQEATRFLMLIFKRAPGKR 1221
+T A L + ++ KR
Sbjct: 262 ITNSARHLLEGLLQKDRTKR 281
Score = 47.6 bits (114), Expect = 1e-05
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
GGEL + L R+ + E Y ++ S L Y+H L+I + L P ++L+ G H++
Sbjct: 122 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIV 179
Query: 523 LTDFGLS 529
LTDFGL
Sbjct: 180 LTDFGLC 186
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 64.9 bits (159), Expect = 4e-11
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 33/164 (20%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
+ Y +++G G G+VY A + GR A K + E +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALK---------RIRLDAEDEGIPSTAIREI 70
Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYI 286
++ +L H N+V L D ++ T++ E L +L ++ + I Y+
Sbjct: 71 SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKK---VLDE--NKTGLQDSQIKIYL 125
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
QLL G+ + H+ I H L P +LL+ G L L DFGL+R
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDG--ALKLADFGLAR 167
Score = 47.5 bits (114), Expect = 1e-05
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
+ I Y+ QLL G+ + H+ I H L P +LL+ G L L DFGL+R
Sbjct: 117 QDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG--ALKLADFGLAR 167
Score = 34.1 bits (79), Expect = 0.29
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L G+ + H + H +++P N+++ +KL D G L P +
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLIN--SDGALKLADFG----------LARAFGIPVRSY 176
Query: 1016 A---------APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
AP+VL + D+WS G + +++G F G ++ +
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 64.7 bits (158), Expect = 4e-11
Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 19/157 (12%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
LG GV G V+ V G + KV+ G Q + + + L H +
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
+VRL S ++++ G LL + + + ++ Q+ G+ Y+
Sbjct: 77 IVRLL-GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 301 IAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
+ H +L L+ P + + DFG++ +
Sbjct: 136 MVHR-----NLAARNVLLKSP--SQVQVADFGVADLL 165
Score = 31.5 bits (72), Expect = 1.8
Identities = 20/82 (24%), Positives = 28/82 (34%), Gaps = 15/82 (18%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAY 1167
L + AK I W A E + Q+DVWS GV +
Sbjct: 163 DLLPPDDKQLLYSEAKTPIKWM--------------ALESIHFGKYTHQSDVWSYGVTVW 208
Query: 1168 VLLS-GASPFRGQSEPETRQNV 1188
L++ GA P+ G E +
Sbjct: 209 ELMTFGAEPYAGLRLAEVPDLL 230
Score = 31.1 bits (71), Expect = 2.5
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
A E + Q+DVWS GV + L++ GA P+ G E +
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL 230
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 65.0 bits (159), Expect = 5e-11
Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 26/170 (15%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
+ Y +G G G V AV+ +G A K + F++ EL
Sbjct: 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR-------PFQSELFAKRAYREL 75
Query: 232 DIMNQLCHRNLVRLHD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY 285
++ + H N++ L D + + F ++ G L L + E I
Sbjct: 76 RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD--LGKLMKHEKLGEDRIQFL 133
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
+ Q+L GL Y+H I H L PG+L V L + DFGL+R+ S
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQADSE 181
Score = 43.1 bits (102), Expect = 4e-04
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L L + E I + Q+L GL Y+H I H L PG+L V L + DFG
Sbjct: 116 LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFG 173
Query: 528 LSRRITSF 535
L+R+ S
Sbjct: 174 LARQADSE 181
Score = 35.4 bits (82), Expect = 0.12
Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 6/115 (5%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT--EFDNLRSLRH 652
Y+ + + G + V A + + KL+ L E L+ +RH
Sbjct: 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH 83
Query: 653 ERIASLLEAYKPSTTASNIA--VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
E + LL+ + P T + LVM G D L L + E + ++ Q
Sbjct: 84 ENVIGLLDVFTPDETLDDFTDFYLVMP-FMGTD-LGKLMKHEKLGEDRIQFLVYQ 136
Score = 33.1 bits (76), Expect = 0.56
Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 33/115 (28%)
Query: 1144 APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS---------------EPETRQN 1187
APEV+ + QT D+WS G + +++G + F+G E Q
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252
Query: 1188 V------NFVRYR-------FEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+ N+++ F + + A L ML+ +R T E
Sbjct: 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVL--DAEQRVTAGEA 305
Score = 30.0 bits (68), Expect = 5.5
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L GL+Y+H G+ H +++P N+ + ++K++D G L ++
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNE--DCELKILDFG----------LARQADSEMTG 184
Query: 1015 FA------APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
+ APEV+ + QT D+WS G + +++G + F+G
Sbjct: 185 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 64.7 bits (158), Expect = 5e-11
Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 20/158 (12%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKNELDIMNQLCHRN 241
+LG G G V + V G Q++S +K E+DI+ L H +
Sbjct: 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEH 94
Query: 242 LVRLHD--SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
+++ S ++ E G L L + + + +Q+ G+ Y+H
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
H DL L+ + R + + DFGL++ +
Sbjct: 154 HYIHR-----DLAARNVLLDN--DRLVKIGDFGLAKAV 184
Score = 31.9 bits (73), Expect = 1.2
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPG 517
P G L L + + + +Q+ G+ Y+H H DL L+ +
Sbjct: 118 PLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR-----DLAARNVLLDN-- 169
Query: 518 GRHLLLTDFGLSRRI 532
R + + DFGL++ +
Sbjct: 170 DRLVKIGDFGLAKAV 184
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 64.3 bits (157), Expect = 7e-11
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 31/163 (19%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
LG G G VY + G A K + + +E +M + + +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
+ RL + +I++L G LL + + + ++ Q+ G++Y+
Sbjct: 79 VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
HR DL LV P +H+ +TDFGL++ +
Sbjct: 138 LVHR-----------DLAARNVLVKTP--QHVKITDFGLAKLL 167
Score = 32.3 bits (74), Expect = 1.0
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
A E + Q+DVWS GV + L++ G+ P+ G E +
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
Score = 32.3 bits (74), Expect = 1.0
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
A E + Q+DVWS GV + L++ G+ P+ G E +
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
Score = 29.6 bits (67), Expect = 6.5
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 25/82 (30%)
Query: 463 PGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRLSIAHLGLTPGDL---- 511
P G LL + + + ++ Q+ G++Y+ HR DL
Sbjct: 99 PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR-----------DLAARN 147
Query: 512 -LVAHPGGRHLLLTDFGLSRRI 532
LV P +H+ +TDFGL++ +
Sbjct: 148 VLVKTP--QHVKITDFGLAKLL 167
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 64.8 bits (158), Expect = 8e-11
Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 23/181 (12%)
Query: 168 YARGRQVKTRTKPITDAYDF-GDELGRGVTGIVYHAVERS--SGRNYAAKVMTGKGNQYK 224
Y ++ + + + D +++ G ++GRG G VY A + ++YA K + G G
Sbjct: 5 YDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMS 64
Query: 225 SLFKNELDIMNQLCHRNLVRLHD--SYETKDSFTIISE-----LAGGGELLHSL------ 271
+ E+ ++ +L H N++ L ++ + L ++
Sbjct: 65 AC--REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWH---IIKFHRASKAN 119
Query: 272 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH--LLLTDFGLS 329
+ + + Q+L G+ Y+H + H L P ++LV G + + D G +
Sbjct: 120 KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179
Query: 330 R 330
R
Sbjct: 180 R 180
Score = 44.4 bits (105), Expect = 2e-04
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH--LLLTDFGLSRRITSF 535
+ + Q+L G+ Y+H + H L P ++LV G + + D G +R F
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR---LF 182
Query: 536 GKLNPLE-YGNGQYKVAVT 553
+PL+ + V VT
Sbjct: 183 N--SPLKPLADLDPVV-VT 198
Score = 34.8 bits (80), Expect = 0.19
Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 13/135 (9%)
Query: 577 PLNYSVEDSPIEWSTEPPTDKYQFISE-IHRGKFSVVVKAAEK-ANTENLVAAKLFEY-- 632
++Y + E D +++ + RG + V KA K + A K E
Sbjct: 2 KMDY-DFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG 60
Query: 633 -SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR 691
S ++ LR L+H + SL + + L+ + + D+ +
Sbjct: 61 ISMSACREIAL----LRELKHPNVISLQKVFLSHADRK--VWLLFDYAE-HDLWHIIKFH 113
Query: 692 HEYTEQNVATIISQA 706
+ +
Sbjct: 114 RASKANKKPVQLPRG 128
Score = 34.4 bits (79), Expect = 0.27
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 25/120 (20%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSV--QVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
LDG+ YLH + H +++P N+++ +VK+ D+G N+P
Sbjct: 138 LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG----------FARLFNSPLK 187
Query: 1014 EFA------------APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
A APE+L + D+W+ G + LL+ F + E N
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 247
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 64.7 bits (158), Expect = 8e-11
Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 35/205 (17%)
Query: 158 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAA--KV 215
D+ N+ + G+ + AY +G G G+V+ A S A KV
Sbjct: 19 DDPNKVIKVLASDGKT----GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE--VAIKKV 72
Query: 216 MTGKGNQYKSLFKN-ELDIMNQLCHRNLVRLHDSYETKDSFT------IISELAGGGELL 268
+ K FKN EL IM + H N+V L + + ++ E E +
Sbjct: 73 LQDK------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETV 124
Query: 269 HSLTRQS-----YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 323
+ +R I Y+ QLL L Y+H + I H + P +LL+ P L L
Sbjct: 125 YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL-DPPSGVLKL 183
Query: 324 TDFGLSRRITSFGKLNPLEYDVRYV 348
DFG ++ L E +V Y+
Sbjct: 184 IDFGSAK------ILIAGEPNVSYI 202
Score = 39.6 bits (93), Expect = 0.006
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
Y+ QLL L Y+H + I H + P +LL+ P L L DFG ++ + +
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLL-DPPSGVLKLIDFGSAKILIA 194
Score = 37.7 bits (88), Expect = 0.021
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
L L Y+H G+CH +I+P N ++ S +KLID G + + + I + +
Sbjct: 151 LRSLAYIHSIGICHRDIKPQN-LLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRY--Y 207
Query: 1016 AAPEVL--AEE---PIFPQTDVWSAG-VLAYVLLSGASPFRGQSE 1054
APE++ A I D+WS G V+A L+ G F G+S
Sbjct: 208 RAPELIFGATNYTTNI----DIWSTGCVMAE-LMQGQPLFPGESG 247
Score = 36.9 bits (86), Expect = 0.041
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-LFEYSHDTLHQVNTEFDNLR 648
+ E Y I G F VV +A + E VA K + + N E +R
Sbjct: 34 TGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE--VAIKKVLQDKRFK----NRELQIMR 87
Query: 649 SLRHERIASLLEAYKPSTTASNIAV--LVME 677
++H + L + + + LV+E
Sbjct: 88 IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE 118
Score = 30.0 bits (68), Expect = 5.1
Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 41/118 (34%)
Query: 1144 APEVL--AEE---PIFPQTDVWSAG-VLAYVLLSGASPFRGQSE-------------PET 1184
APE++ A I D+WS G V+A L+ G F G+S P
Sbjct: 209 APELIFGATNYTTNI----DIWSTGCVMAE-LMQGQPLFPGESGIDQLVEIIKVLGTPSR 263
Query: 1185 RQ----NVNFVRYRF---------EYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
Q N N++ ++F + +A + +L + P R T E
Sbjct: 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY--TPSARLTAIEA 319
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 63.8 bits (156), Expect = 8e-11
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT---GKGNQYKSLFKNELDIMNQLCHRN 241
Y D+LG G VY A + A K + + + F+ E+ +QL H+N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+V + D E D + ++ E G L + + ++ Q+L G+ + H + I
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI 132
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
H + P ++L+ L + DFG+++ ++
Sbjct: 133 VHRDIKPQNILIDSNK--TLKIFDFGIAKALSE 163
Score = 54.2 bits (131), Expect = 9e-08
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---------CTQRVTKLGTLI 1005
+LDG+++ H + H +I+P N+++ + +K+ D G TQ LGT
Sbjct: 120 ILDGIKHAHDMRIVHRDIKPQNILID--SNKTLKIFDFGIAKALSETSLTQTNHVLGT-- 175
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
++ +PE E TD++S G++ Y +L G PF G++
Sbjct: 176 -------VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216
Score = 37.2 bits (87), Expect = 0.024
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1180
+PE E TD++S G++ Y +L G PF G++
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216
Score = 36.1 bits (84), Expect = 0.064
Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
G L + + ++ Q+L G+ + H + I H + P ++L+ L
Sbjct: 94 EGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK--TLK 151
Query: 523 LTDFGLSRRITS 534
+ DFG+++ ++
Sbjct: 152 IFDFGIAKALSE 163
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 63.5 bits (155), Expect = 9e-11
Identities = 36/159 (22%), Positives = 58/159 (36%), Gaps = 20/159 (12%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKNELDIMNQLCHRN 241
+LG G G V G N +V G + + K E++I+ L H N
Sbjct: 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN 84
Query: 242 LVRLHD--SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHR 298
+V+ + + + +I E G L L ++ Y Q+ G+DY+
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 299 LSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
H DL LV + + DFGL++ I
Sbjct: 145 RQYVHR-----DLAARNVLVESE--HQVKIGDFGLTKAI 176
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 62.6 bits (153), Expect = 1e-10
Identities = 24/163 (14%), Positives = 56/163 (34%), Gaps = 18/163 (11%)
Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLV 243
+F +L +G ++ + G + KV+ + + F E + H N++
Sbjct: 13 NFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 244 RL----HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDYM 296
+ T+I+ G L + L + + D + ++ L G+ ++
Sbjct: 71 PVLGACQSPPAPH--PTLITHWMPYGSLYNVLHEGTNFV-VDQSQAVKFALDMARGMAFL 127
Query: 297 HRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
H L I L +++ ++ + S G+
Sbjct: 128 HTLEPLIPRHALNSRSVMID--EDMTARISMADVKFSFQSPGR 168
Score = 47.6 bits (114), Expect = 1e-05
Identities = 20/102 (19%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 958 GLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT-KLGTLIHPINTPNPE 1014
G+ +LH + + +V++ + ++ + D+ + + ++ P
Sbjct: 123 GMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYA---------PA 173
Query: 1015 FAAPEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQS 1053
+ APE L ++P D+WS VL + L++ PF S
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS 215
Score = 36.1 bits (84), Expect = 0.060
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Query: 1144 APEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200
APE L ++P D+WS VL + L++ PF S E V R
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT--IP 233
Query: 1201 ELTQEATRFLMLI-FKRAPGKRPTVEE 1226
LM I P KRP +
Sbjct: 234 PGISPHVSKLMKICMNEDPAKRPKFDM 260
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 63.4 bits (155), Expect = 1e-10
Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 29/179 (16%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKN----ELDIMNQL 237
Y+ E+G G G VY A + SG A K V G E+ ++ +L
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 238 ---CHRNLVRLHD-----SYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAH 284
H N+VRL D + + T++ E L L I
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT---YLDKA-PPPGLPAETIKD 124
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEY 343
+RQ L GLD++H I H L P ++LV G + L DFGL+R + +
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--TVKLADFGLAR---IYSY--QMAL 176
Score = 47.2 bits (113), Expect = 2e-05
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
I +RQ L GLD++H I H L P ++LV G + L DFGL+R
Sbjct: 113 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--TVKLADFGLAR-- 168
Query: 533 TSFGKLNPLEY 543
+ +
Sbjct: 169 -IYSY--QMAL 176
Score = 34.1 bits (79), Expect = 0.27
Identities = 23/110 (20%), Positives = 33/110 (30%), Gaps = 28/110 (25%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE-------------------PET 1184
APEVL + D+WS G + + F G SE P
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246
Query: 1185 RQ--NVNFVRY---RFEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
F + + E+ + + L ML F P KR +
Sbjct: 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFN--PHKRISAFRA 294
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 63.5 bits (155), Expect = 1e-10
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 27/170 (15%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
+ Y +G G G V A+++ SG A K ++ F++ EL
Sbjct: 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEIFAKRAYREL 74
Query: 232 DIMNQLCHRNLVRLHD---SYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHY 285
++ + H N++ L D + +F ++ L + + +E I +
Sbjct: 75 LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKF-SEEKIQYL 131
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
+ Q+L GL Y+H + H L PG+L V L + DFGL+R +
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC--ELKILDFGLARHADAE 179
Score = 40.7 bits (96), Expect = 0.002
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L + + +E I + + Q+L GL Y+H + H L PG+L V L + DFG
Sbjct: 115 LQKIMGLKF-SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC--ELKILDFG 171
Query: 528 LSRRITSF 535
L+R +
Sbjct: 172 LARHADAE 179
Score = 36.1 bits (84), Expect = 0.072
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT--EFDNLRSLRH 652
Y + + G + V A +K + E + KL + E L+ ++H
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH 82
Query: 653 ERIASLLEAYKPSTTASN 670
E + LL+ + P+++ N
Sbjct: 83 ENVIGLLDVFTPASSLRN 100
Score = 33.8 bits (78), Expect = 0.40
Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 33/115 (28%)
Query: 1144 APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS---------------EPETRQN 1187
APEV+ + QT D+WS G + +L+G + F+G+ E Q
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250
Query: 1188 V------NFVRYR-------FEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+ ++++ F LF + +A L ML KR T +
Sbjct: 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLEL--DVDKRLTAAQA 303
Score = 31.1 bits (71), Expect = 2.7
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L GL+Y+H G+ H +++P N+ + ++K++D G L +
Sbjct: 135 MLKGLKYIHSAGVVHRDLKPGNLAVNE--DCELKILDFG----------LARHADAEMTG 182
Query: 1015 FA------APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
+ APEV+ + QT D+WS G + +L+G + F+G+
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 62.7 bits (153), Expect = 2e-10
Identities = 42/195 (21%), Positives = 73/195 (37%), Gaps = 38/195 (19%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
+ Y LG G G+V+ AV+ + A K K + + E+
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---------KIVLTDPQSVKHALREI 59
Query: 232 DIMNQLCHRNLVRLHD-----------SYETKDSFT---IISELAGGGELLHSLTRQSYY 277
I+ +L H N+V++ + + I+ E L ++ Q
Sbjct: 60 KIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPL 117
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
E ++ QLL GL Y+H ++ H L P +L + + L + DFGL+R +
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI-NTEDLVLKIGDFGLARIMDPHYS 176
Query: 338 LNPL--EYDV-RYVR 349
E V ++ R
Sbjct: 177 HKGHLSEGLVTKWYR 191
Score = 40.3 bits (95), Expect = 0.003
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L ++ Q E ++ QLL GL Y+H ++ H L P +L + + L + DFG
Sbjct: 108 LANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI-NTEDLVLKIGDFG 166
Query: 528 LSRRITS 534
L+R +
Sbjct: 167 LARIMDP 173
Score = 38.4 bits (90), Expect = 0.013
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK--LFEYSHDTLHQVNTEFDNLRSLRH 652
+Y + + G +V A + + + VA K + H + E +R L H
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDN-DCDKRVAIKKIVLTDPQSVKHALR-EIKIIRRLDH 67
Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ I + E PS + V + +L V Y+ EY E ++A ++ Q
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELN--SV--YIVQ--EYMETDLANVLEQ 114
Score = 34.2 bits (79), Expect = 0.26
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 32/114 (28%)
Query: 1144 APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS---------------EPETRQN 1187
+P +L + + D+W+AG + +L+G + F G E RQ
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQE 251
Query: 1188 V-----NFV-------RYRFEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+ ++ L +++EA FL +L F +P R T EE
Sbjct: 252 LLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTF--SPMDRLTAEEA 303
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 62.3 bits (152), Expect = 2e-10
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 29/160 (18%)
Query: 190 ELGRGVTGIVYHAVERSSGRNY--AAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
ELG G G V + A K++ K E ++M QL + +VR+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
+S+ ++ E+A G L L + + + +I + Q+ G+ Y+ HR
Sbjct: 84 I-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR- 141
Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
DL L+ + ++DFGLS+ + +
Sbjct: 142 ----------DLAARNVLLVTQH--YAKISDFGLSKALRA 169
Score = 32.2 bits (74), Expect = 1.1
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 24/83 (28%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM------HRLSIAHLGLTPGDL----- 511
G L L + + + +I + Q+ G+ Y+ HR DL
Sbjct: 100 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR-----------DLAARNV 148
Query: 512 LVAHPGGRHLLLTDFGLSRRITS 534
L+ + ++DFGLS+ + +
Sbjct: 149 LLVTQH--YAKISDFGLSKALRA 169
Score = 31.8 bits (73), Expect = 1.4
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
APE + ++DVWS GVL + S G P+RG E +
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
Score = 31.8 bits (73), Expect = 1.4
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
APE + ++DVWS GVL + S G P+RG E +
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 62.4 bits (152), Expect = 2e-10
Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 19/158 (12%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
+ +LG+G G V G N A K + G + F+ E+ I+ L +
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 243 VRLHD--SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
V+ + S ++ E G L L ++ + Y Q+ G++Y+
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
H DL LV H+ + DFGL++ +
Sbjct: 147 RCVHR-----DLAARNILVESE--AHVKIADFGLAKLL 177
Score = 31.5 bits (72), Expect = 1.6
Identities = 33/152 (21%), Positives = 51/152 (33%), Gaps = 34/152 (22%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APE L++ Q+DVWS GV+ Y L + +E L + L
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257
Query: 1203 TQEATRFLMLIFKRAPGKR-PTVEECHENRWLVPSE-YMIKKR-------ERAVF--LGN 1251
+ G+R P C P+E + + K +R F LG
Sbjct: 258 EE--------------GQRLPAPPAC-------PAEVHELMKLCWAPSPQDRPSFSALGP 296
Query: 1252 RLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRS 1283
+L + FT+ H +L+ S
Sbjct: 297 QLDMLWSGSRGCETHAFTA-HPEGKHHSLSFS 327
Score = 31.2 bits (71), Expect = 2.1
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSE 1054
APE L++ Q+DVWS GV+ Y L + +E
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 63.7 bits (155), Expect = 3e-10
Identities = 40/151 (26%), Positives = 60/151 (39%), Gaps = 8/151 (5%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
G +G G G V+ + S A K + + F E M Q H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
V+L T++ II EL GEL L R+ + Y QL + L Y+
Sbjct: 454 VKLI-GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
H + ++LV+ + L DFGLSR +
Sbjct: 513 VHRDIAARNVLVSSN--DCVKLGDFGLSRYM 541
Score = 33.3 bits (76), Expect = 0.58
Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APE + +DVW GV + +L G PF+G + + R
Sbjct: 560 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMP--PN 616
Query: 1203 TQEATRFLMLI-FKRAPGKRPTVEECHE 1229
LM + P +RP E
Sbjct: 617 CPPTLYSLMTKCWAYDPSRRPRFTELKA 644
Score = 33.3 bits (76), Expect = 0.69
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE + +DVW GV + +L G PF+G + +
Sbjct: 560 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Score = 31.0 bits (70), Expect = 3.4
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 463 PGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
GEL L R+ + Y QL + L Y+ H + ++LV+ +
Sbjct: 473 TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN--DCV 530
Query: 522 LLTDFGLSRRI 532
L DFGLSR +
Sbjct: 531 KLGDFGLSRYM 541
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 62.7 bits (153), Expect = 3e-10
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 14/153 (9%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
G+++GRG G V+ R+ A K K+ F E I+ Q H N+VRL
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
K I+ EL GG+ L L T + + + +G++Y+ H
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 305 GLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
DL LV L ++DFG+SR
Sbjct: 238 -----DLAARNCLVTE--KNVLKISDFGMSREE 263
Score = 40.3 bits (95), Expect = 0.003
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKE 1201
APE L + ++DVWS G+L + S GASP+ S +TR+ V R E
Sbjct: 283 APEALNYG-RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE-KGGRLP--CPE 338
Query: 1202 LTQEATRFLML-IFKRAPGKRPTVEECHE 1229
L +A LM + PG+RP+ ++
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367
Score = 38.8 bits (91), Expect = 0.011
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 957 DGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV------TKLGTLIHPINT 1010
G++YL + H ++ N ++ +K+ D G ++ G P+
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKN--VLKISDFGMSREEADGVYAASGGLRQVPV-- 279
Query: 1011 PNPEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ APE L + ++DVWS G+L + S GASP+ S +TR+ V
Sbjct: 280 ---KWTAPEALNYG-RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 61.5 bits (150), Expect = 4e-10
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-------AAKVMTGKGNQYKSLFKNELDIMNQLCH 239
F + LG+G ++ V R G KV+ Y F +M++L H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHR 298
++LV + D ++ E G L L ++ +QL + + ++
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE 131
Query: 299 LSIAHLGLTPGDL-----LVAHPGGRHLL------LTDFGLSRRITS 334
++ H G++ L+ R L+D G+S +
Sbjct: 132 NTLIH-----GNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Score = 36.1 bits (84), Expect = 0.066
Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 13/113 (11%)
Query: 957 DGLQYLHWRGLCHLNIEPDNVVMASVRSVQ------VKLIDLGCTQRVTKLGTLIHPINT 1010
+ +L L H N+ N+++ + +KL D G + V L I
Sbjct: 124 AAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI-- 181
Query: 1011 PNPEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
+ PE + TD WS G + + S G P Q
Sbjct: 182 ---PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231
Score = 35.3 bits (82), Expect = 0.11
Identities = 17/94 (18%), Positives = 24/94 (25%), Gaps = 18/94 (19%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEY---- 1197
PE + TD WS G + + S G P Q R++
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQLPAPKAA 243
Query: 1198 -LFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
L L+ P RP+
Sbjct: 244 ELAN---------LINNCMDYEPDHRPSFRAIIR 268
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 62.6 bits (152), Expect = 4e-10
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
+ Y +G G GIV A + RN A K ++ F+N EL
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-------PFQNQTHAKRAYREL 112
Query: 232 DIMNQLCHRNLVRLHD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY 285
+M + H+N++ L + + E ++ EL L + + +++
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMEL-DHERMSYL 169
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ Q+L G+ ++H I H L P +++V L + DFGL+R +
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGT 216
Score = 39.8 bits (93), Expect = 0.005
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L + + +++ + Q+L G+ ++H I H L P +++V L + DFG
Sbjct: 153 LCQVIQMEL-DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFG 209
Query: 528 LSRRITS 534
L+R +
Sbjct: 210 LARTAGT 216
Score = 36.7 bits (85), Expect = 0.052
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK----LFEYSHDTLHQVNTEFDNLRSL 650
+YQ + I G +V A + N VA K F+ E ++ +
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCV 118
Query: 651 RHERIASLLEAYKPSTTASNIA--VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
H+ I SLL + P T LVME L A++ + + E + ++ ++ Q
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVI--QMELDHERMSYLLYQ 172
Score = 33.7 bits (77), Expect = 0.44
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
Y + +L G+++LH G+ H +++P N+V+ S +K++D G + + +
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVV 225
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
T + APEV+ D+WS G + ++ F G+
Sbjct: 226 T--RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 61.9 bits (151), Expect = 4e-10
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 26/178 (14%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
I+ + LG G G+V A + +G A K + F E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--------EPFDKPLFALRTLREI 60
Query: 232 DIMNQLCHRNLVRLHDSY--ETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHYI 286
I+ H N++ + + ++ ++F II EL LH + ++ I ++I
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYD 344
Q L + +H ++ H L P +LL+ L + DFGL+R I N
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNC--DLKVCDFGLARIIDESAADNSEPTG 174
Score = 40.7 bits (96), Expect = 0.002
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
LH + ++ I ++I Q L + +H ++ H L P +LL+ L + DFG
Sbjct: 100 LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC--DLKVCDFG 157
Query: 528 LSRRITSFGKLNPLEYGNGQY 548
L+R I N G
Sbjct: 158 LARIIDESAADNSEPTGQQSG 178
Score = 38.8 bits (91), Expect = 0.010
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDNLRSLR 651
+ +Q S + G + VV A K T +VA K F+ L + E L+ +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHK-PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFK 67
Query: 652 HERIASLLEAYKPSTTASNIAV-LVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
HE I ++ +P + + V ++ E L D L + S ++ ++ I Q
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQE-LMQTD-LHRVISTQMLSDDHIQYFIYQ 120
Score = 33.4 bits (77), Expect = 0.45
Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 36/117 (30%)
Query: 1144 APEVLAEEPIFPQT-DVWSAG-VLAYVLLSGASPFRGQS-------------EPETRQNV 1188
APEV+ + + DVWS G +LA L F G+ P + ++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAE-LFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 1189 NFV----------------RYRFEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+ E +F + + L ML+F P KR T +E
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVF--DPAKRITAKEA 303
Score = 29.1 bits (66), Expect = 9.9
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 16/111 (14%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
L ++ LH + H +++P N+++ S + +K+ D G R+ + T
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINS--NCDLKVCDFGLA-RIIDESAADNSEPTGQQS 177
Query: 1015 FA----------APEVLAEEPIFPQT-DVWSAG-VLAYVLLSGASPFRGQS 1053
APEV+ + + DVWS G +LA L F G+
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE-LFLRRPIFPGRD 227
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 61.1 bits (149), Expect = 5e-10
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 29/160 (18%)
Query: 190 ELGRGVTGIVYHAVERSSGRNY--AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
ELG G G V V R + A KV+ G E IM+QL + +VRL
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
++ ++ E+AGGG L L ++ ++A + Q+ G+ Y+ HR
Sbjct: 77 -GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR- 134
Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
DL L+ + + ++DFGLS+ + +
Sbjct: 135 ----------DLAARNVLLVNR--HYAKISDFGLSKALGA 162
Score = 31.8 bits (73), Expect = 1.3
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
APE + ++DVWS GV + LS G P++ PE +
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 227
Score = 31.8 bits (73), Expect = 1.3
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
APE + ++DVWS GV + LS G P++ PE +
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 227
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 61.1 bits (149), Expect = 5e-10
Identities = 42/162 (25%), Positives = 60/162 (37%), Gaps = 30/162 (18%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
G +G G G V+ + S A K + + F E M Q H ++
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM----- 296
V+L T++ II EL GEL L R+ + Y QL + L Y+
Sbjct: 79 VKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137
Query: 297 -HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
HR D+ LV+ + L DFGLSR +
Sbjct: 138 VHR-----------DIAARNVLVSSN--DCVKLGDFGLSRYM 166
Score = 32.2 bits (74), Expect = 1.0
Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 19/95 (20%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFE------ 1196
APE + +DVW GV + +L G PF+G + + R
Sbjct: 185 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCP 243
Query: 1197 -YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
L+ LM + P +RP E
Sbjct: 244 PTLYS---------LMTKCWAYDPSRRPRFTELKA 269
Score = 31.8 bits (73), Expect = 1.2
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
APE + +DVW GV + +L G PF+G + +
Sbjct: 185 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 231
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 61.4 bits (149), Expect = 6e-10
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN--QLCHRNLV 243
+ +GRG G VY R A KV + + F NE +I + H N+
Sbjct: 16 KLLELIGRGRYGAVYKGSLD--ERPVAVKVFS---FANRQNFINEKNIYRVPLMEHDNIA 70
Query: 244 RL-----HDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYM 296
R + + + + ++ E G L L+ + + +AH + GL Y+
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAH---SVTRGLAYL 127
Query: 297 H---------RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYD 344
H + +I+H L ++LV + G +++DFGLS R+T + P E D
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDG--TCVISDFGLSMRLTGNRLVRPGEED 182
Score = 31.0 bits (70), Expect = 2.4
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
Query: 463 PGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMH---------RLSIAHLGLTPGDL 511
P G L L+ + + +AH + GL Y+H + +I+H L ++
Sbjct: 95 PNGSLXKYLSLHTSDWVSSCRLAH---SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV 151
Query: 512 LVAHPGGRHLLLTDFGLSRRITS 534
LV + G +++DFGLS R+T
Sbjct: 152 LVKNDG--TCVISDFGLSMRLTG 172
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 61.5 bits (150), Expect = 6e-10
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
+G G +G V + R G+ A K + G + + F +E IM Q H N+
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+RL I++E G L L T +T + +R + +G+ Y+ L
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 302 AHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
H L ++LV +L+ ++DFGLSR +
Sbjct: 173 VHRDLAARNVLV----DSNLVCKVSDFGLSRVL 201
Score = 32.7 bits (75), Expect = 0.68
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
APE +A F +DVWS GV+ + +L+ G P+ + + +V
Sbjct: 222 APEAIAFR-TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE 268
Score = 32.7 bits (75), Expect = 0.68
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
APE +A F +DVWS GV+ + +L+ G P+ + + +V
Sbjct: 222 APEAIAFR-TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE 268
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 60.7 bits (148), Expect = 6e-10
Identities = 45/162 (27%), Positives = 60/162 (37%), Gaps = 30/162 (18%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
LG G G VY V + A K K F +E IM L H ++
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM----- 296
V+L ++ II EL GEL H L ++ + Y Q+ + Y+
Sbjct: 76 VKLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 134
Query: 297 -HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
HR D+ LVA P + L DFGLSR I
Sbjct: 135 VHR-----------DIAVRNILVASP--ECVKLGDFGLSRYI 163
Score = 30.6 bits (70), Expect = 2.7
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
+PE + F +DVW V + +LS G PF + +
Sbjct: 182 SPESINFR-RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 228
Score = 30.6 bits (70), Expect = 2.7
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
+PE + F +DVW V + +LS G PF + +
Sbjct: 182 SPESINFR-RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 228
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 61.3 bits (149), Expect = 6e-10
Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI--MNQLCHRNLVR 244
+ +G+G G V+ R G A K+ + ++ + + E +I L H N++
Sbjct: 46 LQESIGKGRFGEVWRGKWR--GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG 100
Query: 245 LHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--- 297
+ + ++S+ G L L R + T + SGL ++H
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEI 159
Query: 298 -----RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
+ +IAH L ++LV G + D GL+ R S
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSA 200
Score = 37.8 bits (88), Expect = 0.017
Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 5/105 (4%)
Query: 587 IEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDN 646
+ T I +G+F V + + VA K+F + E
Sbjct: 35 LVQRTIA--RTIVLQESIGKGRFGEVWRGKWRGEE---VAVKIFSSREERSWFREAEIYQ 89
Query: 647 LRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR 691
LRHE I + A LV + + + YL+
Sbjct: 90 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY 134
Score = 32.4 bits (74), Expect = 0.87
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--------RLSIAHLGLTPGDLLVA 514
G L L R + T + SGL ++H + +IAH L ++LV
Sbjct: 123 EHGSLFDYLNRYTV-TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181
Query: 515 HPGGRHLLLTDFGLSRRITSF 535
G + D GL+ R S
Sbjct: 182 KNG--TCCIADLGLAVRHDSA 200
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 60.7 bits (148), Expect = 7e-10
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 32/164 (19%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM---TGKGNQYKSLFKNELDIMNQLCHR 240
++LG G G+V + A K + + F E++ M+ L HR
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM--- 296
NL+RL+ +++ELA G LL L Q ++ ++ Y Q+ G+ Y+
Sbjct: 82 NLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 297 ---HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
HR DL L+A + + DFGL R +
Sbjct: 141 RFIHR-----------DLAARNLLLATR--DLVKIGDFGLMRAL 171
Score = 35.7 bits (83), Expect = 0.075
Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 13/118 (11%)
Query: 957 DGLQYLHWRGLCHLNIEPDNVVMASVRSVQV------KLIDLGCTQRVTKLGTLIHPINT 1010
+G+ YL + H ++ N+++A+ V++ + + V + + P
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PF-- 188
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1067
+ APE L +D W GV + + + G P+ G + + ++ R
Sbjct: 189 ---AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 243
Score = 35.3 bits (82), Expect = 0.12
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYR 1194
APE L +D W GV + + + G P+ G + + ++ R
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER 243
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 61.1 bits (149), Expect = 7e-10
Identities = 42/186 (22%), Positives = 68/186 (36%), Gaps = 45/186 (24%)
Query: 183 DAYDFGDELGRGVTGIVYHAVE-RSSGRNYAAKVMTGKGNQYKSLFKNE----------- 230
Y+ E+G G G V+ A + ++ GR A K + +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---------RVRVQTGEEGMPLSTIRE 61
Query: 231 ---LDIMNQLCHRNLVRLHD-----SYETKDSFTIISE-----LAGGGELLHSLTRQSYY 277
L + H N+VRL D + + T++ E L L + +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKV-PEPGV 117
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
I + QLL GLD++H + H L P ++LV G + L DFGL+R +
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLAR---IYS- 171
Query: 338 LNPLEY 343
+
Sbjct: 172 -FQMAL 176
Score = 48.4 bits (116), Expect = 9e-06
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
+ I + QLL GLD++H + H L P ++LV G + L DFGL+R
Sbjct: 113 PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLAR-- 168
Query: 533 TSFGKLNPLEY 543
+ +
Sbjct: 169 -IYS--FQMAL 176
Score = 34.1 bits (79), Expect = 0.24
Identities = 22/110 (20%), Positives = 31/110 (28%), Gaps = 28/110 (25%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE-------------------PET 1184
APEVL + D+WS G + + FRG S+ P
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 1185 RQ--NVNFVRY---RFEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
F E ++ + L L F P KR +
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN--PAKRISAYSA 294
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 61.7 bits (150), Expect = 7e-10
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 26/169 (15%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
+ D Y +GRG G VY A ++++ +N A K + +F++ E+
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN-------RMFEDLIDCKRILREI 76
Query: 232 DIMNQLCHRNLVRLHDSY--ETKDSFT---IISELAGGGELLHSLTRQSYY-TEYDIAHY 285
I+N+L ++RL+D + F I+ E+A L L + + TE I
Sbjct: 77 TILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSD--LKKLFKTPIFLTEEHIKTI 134
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ LL G +++H I H L P + L+ + + DFGL+R I S
Sbjct: 135 LYNLLLGENFIHESGIIHRDLKPANCLLNQDC--SVKVCDFGLARTINS 181
Score = 39.7 bits (93), Expect = 0.006
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK----LFEYSHDTLHQVNTEFDNLRSL 650
D Y I RG + V A +K NTE VA K +FE D + E L L
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDK-NTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRL 82
Query: 651 RHERIASLLEAYKPSTTASNIAV-LVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
+ + I L + P + +V+E + +D+ + TE+++ TI+
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYN 137
Score = 37.4 bits (87), Expect = 0.032
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQ 547
LL G +++H I H L P + L+ + + DFGL+R I S N +
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLNQDC--SVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 548 YKVAVTPAMKHLQAITE 564
+ + +T
Sbjct: 195 EEPG-PHNKNLKKQLTS 210
Score = 29.7 bits (67), Expect = 7.9
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1195 FEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+ + ++ + L ML F P KR T+++
Sbjct: 327 LKQKYPSISDDGINLLESMLKF--NPNKRITIDQA 359
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 60.8 bits (148), Expect = 8e-10
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 19/158 (12%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
F +LG+G G V N A K + ++ F+ E++I+ L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 243 VRLHD--SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
V+ + + +I E G L L + + Y Q+ G++Y+
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
H DL LV + + + DFGL++ +
Sbjct: 134 RYIHR-----DLATRNILVENE--NRVKIGDFGLTKVL 164
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 61.2 bits (149), Expect = 8e-10
Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 23/172 (13%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKSLFKN--------- 229
+ Y + G G V V+ G A K T + ++ +
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 230 ELDIMNQLCHRNLVRLHDSY--ETKDSFT---IISELAGGGELLHSL--TRQSYYTEYDI 282
E+ ++N H N++ L D + + + +++EL L + ++ + I
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQHI 136
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+++ +L GL +H + H L PG++L+A + + DF L+R T+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN--DITICDFNLAREDTA 186
Score = 40.8 bits (96), Expect = 0.002
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 468 LHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD 525
L + ++ + I +++ +L GL +H + H L PG++L+A + + D
Sbjct: 120 LAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN--DITICD 177
Query: 526 FGLSRRITS 534
F L+R T+
Sbjct: 178 FNLAREDTA 186
Score = 38.8 bits (91), Expect = 0.009
Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 19/126 (15%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDN-------- 646
Y I G + V + VA K + VN +
Sbjct: 21 QSPYTVQRFISSGSYGAVCAGVDSEGIP--VAIKRVFNTVSDGRTVNI-LSDSFLCKRVL 77
Query: 647 -----LRSLRHERIASLLEAYKPSTTASNIAV-LVMEKLQGADVLSYLSSRHEY-TEQNV 699
L H I L + + + + LV E L D+ + + + Q++
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQHI 136
Query: 700 ATIISQ 705
+
Sbjct: 137 QYFMYH 142
Score = 33.0 bits (76), Expect = 0.66
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 36/117 (30%)
Query: 1144 APEVLAEEPIFPQT-DVWSAG-VLAYVLLSGASPFRGQS---------------EPETRQ 1186
APE++ + F + D+WSAG V+A + + + FRG + + E
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAE-MFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 1187 NV------NFVRYR--------FEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+++R + + A + ML F P +R + E+
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF--NPQRRISTEQA 314
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 61.1 bits (149), Expect = 8e-10
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
+ Y +G G G+V A + + A K + S F++ E+
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--------SPFEHQTYCQRTLREI 76
Query: 232 DIMNQLCHRNLVRLHDSY--ETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHYI 286
I+ + H N++ ++D T + I+ +L L+ L + + + I +++
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFL 134
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL--EYD 344
Q+L GL Y+H ++ H L P +LL+ L + DFGL+R EY
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 345 V-RYVR 349
R+ R
Sbjct: 193 ATRWYR 198
Score = 40.3 bits (95), Expect = 0.004
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L+ L + + + I +++ Q+L GL Y+H ++ H L P +LL+ L + DFG
Sbjct: 116 LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFG 173
Query: 528 LSRRITSFGKLNPL--EY 543
L+R EY
Sbjct: 174 LARVADPDHDHTGFLTEY 191
Score = 35.7 bits (83), Expect = 0.099
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDNLRSLR 651
+Y +S I G + +V A + + VA K FE+ + E L R
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDN-LNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFR 83
Query: 652 HERIASLLEAYKPSTTASNIAV-LVMEKLQGAD 683
HE I + + + T V +V + L D
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQD-LMETD 115
Score = 33.0 bits (76), Expect = 0.58
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 35/116 (30%)
Query: 1144 APEVLAEEPIFPQT-DVWSAG-VLAYVLLSGASPFRGQS---------------EPETRQ 1186
APE++ + ++ D+WS G +LA +LS F G+ E
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAE-MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
Query: 1187 NV------NFVRYR-------FEYLFKELTQEATRFL--MLIFKRAPGKRPTVEEC 1227
+ N++ + LF +A L ML F P KR VE+
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF--NPHKRIEVEQA 311
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 60.1 bits (146), Expect = 1e-09
Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 7/152 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCHRN 241
Y G + A++ + R A + + + ++++
Sbjct: 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPG 92
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+ R+ D T+ +++E GG L + ++ L + D HR +
Sbjct: 93 VARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSP--SPVGAIRAMQSLAAAADAAHRAGV 150
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
A P + V+ G ++L
Sbjct: 151 ALSIDHPSRVRVSIDG--DVVLAYPATMPDAN 180
Score = 50.9 bits (122), Expect = 1e-06
Identities = 16/115 (13%), Positives = 23/115 (20%), Gaps = 30/115 (26%)
Query: 943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG 1002
P+ + S+ H G+ P V ++ V L
Sbjct: 126 PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI--DGDVVLAYPATMPDAN--- 180
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
PQ D+ G Y LL P
Sbjct: 181 -------------------------PQDDIRGIGASLYALLVNRWPLPEAGVRSG 210
Score = 38.6 bits (90), Expect = 0.008
Identities = 8/30 (26%), Positives = 9/30 (30%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1184
PQ D+ G Y LL P
Sbjct: 181 PQDDIRGIGASLYALLVNRWPLPEAGVRSG 210
Score = 35.9 bits (83), Expect = 0.065
Identities = 9/51 (17%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 483 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 533
++ L + D HR +A P + V+ G ++L
Sbjct: 132 IRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDG--DVVLAYPATMPDAN 180
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 60.5 bits (147), Expect = 1e-09
Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 19/158 (12%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
F +LG+G G V N A K + ++ F+ E++I+ L H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 243 VRLHD--SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
V+ + + +I E G L L + + Y Q+ G++Y+
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 164
Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
H DL LV + + + DFGL++ +
Sbjct: 165 RYIHR-----DLATRNILVENE--NRVKIGDFGLTKVL 195
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 61.5 bits (149), Expect = 1e-09
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 29/160 (18%)
Query: 190 ELGRGVTGIVYHAVERSSGRNY--AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
ELG G G V V R + A KV+ G E IM+QL + +VRL
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
++ ++ E+AGGG L L ++ ++A + Q+ G+ Y+ HR
Sbjct: 403 -GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR- 460
Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
+L L+ + + ++DFGLS+ + +
Sbjct: 461 ----------NLAARNVLLVNR--HYAKISDFGLSKALGA 488
Score = 33.0 bits (75), Expect = 0.79
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 15/78 (19%)
Query: 1113 ETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS- 1171
++ YT R + K + W APE + ++DVWS GV + LS
Sbjct: 490 DSYYTARSAGKWPLKWY--------------APECINFRKFSSRSDVWSYGVTMWEALSY 535
Query: 1172 GASPFRGQSEPETRQNVN 1189
G P++ PE +
Sbjct: 536 GQKPYKKMKGPEVMAFIE 553
Score = 33.0 bits (75), Expect = 0.84
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
APE + ++DVWS GV + LS G P++ PE +
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 553
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 60.1 bits (146), Expect = 1e-09
Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI--MNQLCHRNLV 243
+ +G+G G V+ R G A K+ + ++ + + E +I L H N++
Sbjct: 6 VLQESIGKGRFGEVWRGKWR--GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL 60
Query: 244 RL----HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-- 297
+ T ++S+ G L L R + T + SGL ++H
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV-TVEGMIKLALSTASGLAHLHME 119
Query: 298 ------RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ +IAH L ++LV G + D GL+ R S
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDS 160
Score = 36.2 bits (84), Expect = 0.059
Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 3/93 (3%)
Query: 599 QFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASL 658
I +G+F V + + VA K+F + E LRHE I
Sbjct: 6 VLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 62
Query: 659 LEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR 691
+ A LV + + + YL+
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY 95
Score = 31.2 bits (71), Expect = 2.0
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--------RLSIAHLGLTPGDLLVA 514
G L L R + T + SGL ++H + +IAH L ++LV
Sbjct: 84 EHGSLFDYLNRYTV-TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 142
Query: 515 HPGGRHLLLTDFGLSRRITS 534
G + D GL+ R S
Sbjct: 143 KNG--TCCIADLGLAVRHDS 160
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 60.1 bits (146), Expect = 2e-09
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 11/155 (7%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
+G G G V + + A K + G + + F E IM Q H N+
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
+RL I++E G L L + +T + +R + SG+ Y+ +
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168
Query: 302 AHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRITS 334
H L ++L+ +L+ ++DFGL R +
Sbjct: 169 VHRDLAARNILI----NSNLVCKVSDFGLGRVLED 199
Score = 33.5 bits (77), Expect = 0.49
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
+PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
Score = 33.5 bits (77), Expect = 0.49
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
+PE +A +DVWS G++ + ++S G P+ S + + V+
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 60.6 bits (147), Expect = 2e-09
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+LG G G VY V + A K + + F E +M ++ H NLV+L
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 247 DSYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ F II+E G LL L + + + + Q+ S ++Y+ + + H
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
L + LV G + L + DFGLSR +
Sbjct: 343 NLAARNCLV----GENHLVKVADFGLSRLM 368
Score = 38.6 bits (90), Expect = 0.015
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TKLGTLIHPIN 1009
+ ++YL + H N+ N ++ + VK+ D G ++ + T PI
Sbjct: 327 ISSAMEYLEKKNFIHRNLAARNCLVGE--NHLVKVADFGLSRLMTGDTYTAHAGAKFPI- 383
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
++ APE LA ++DVW+ GVL + + + G SP+ G + + +
Sbjct: 384 ----KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 432
Score = 37.8 bits (88), Expect = 0.021
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
APE LA ++DVW+ GVL + + + G SP+ G + + + YR E E
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRME--RPEG 443
Query: 1203 TQEATRFLMLI-FKRAPGKRPTVEECHE 1229
E LM ++ P RP+ E H+
Sbjct: 444 CPEKVYELMRACWQWNPSDRPSFAEIHQ 471
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 59.7 bits (145), Expect = 2e-09
Identities = 50/211 (23%), Positives = 71/211 (33%), Gaps = 54/211 (25%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN-ELDIMNQLC 238
+ Y G LG G GIV + SG+ +A K K Q +KN ELDIM L
Sbjct: 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALK----KVLQDPR-YKNRELDIMKVLD 58
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD----------------- 281
H N+++L D + T +
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118
Query: 282 ---------IAHYIR---------------QLLSGLDYMHRLSIAHLGLTPGDLLVAHPG 317
+ +IR QL + ++H L I H + P +LLV +
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV-NSK 177
Query: 318 GRHLLLTDFGLSRRITSFGKLNPLEYDVRYV 348
L L DFG ++ KL P E V Y+
Sbjct: 178 DNTLKLCDFGSAK------KLIPSEPSVAYI 202
Score = 40.1 bits (94), Expect = 0.004
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
YI QL + ++H L I H + P +LLV + L L DFG ++++
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLV-NSKDNTLKLCDFGSAKKLIP 194
Score = 36.6 bits (85), Expect = 0.043
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
+ ++H G+CH +I+P N+++ S + +KL D G +++ + I + +
Sbjct: 151 FRAVGFIHSLGICHRDIKPQNLLVNS-KDNTLKLCDFGSAKKLIPSEPSVAYICSRF--Y 207
Query: 1016 AAPEVL--AEEPIFPQTDVWSAG-VLAYVLLSGASPFRGQSE 1054
APE++ A E P D+WS G V L+ G F G++
Sbjct: 208 RAPELMLGATEYT-PSIDLWSIGCVFGE-LILGKPLFSGETS 247
Score = 35.5 bits (82), Expect = 0.12
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 6/76 (7%)
Query: 592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-LFEYSHDTLHQVNTEFDNLRSL 650
E + KY + G F +V + + + A K + + N E D ++ L
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDI-ESGKRFALKKVLQDPRYK----NRELDIMKVL 57
Query: 651 RHERIASLLEAYKPST 666
H I L++ + +
Sbjct: 58 DHVNIIKLVDYFYTTG 73
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 58.4 bits (142), Expect = 3e-09
Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 31/162 (19%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
F E+G G G+V+ + + A K + +G + F E ++M +L H LV+L+
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
+ +++E G L L T++ + + + G+ Y+ HR
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR- 128
Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLL--LTDFGLSRRITS 334
DL LV G + + ++DFG++R +
Sbjct: 129 ----------DLAARNCLV----GENQVIKVSDFGMTRFVLD 156
Score = 35.3 bits (82), Expect = 0.11
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFK-E 1201
+PEV + ++DVWS GVL + + S G P+ +S E ++++ +R L+K
Sbjct: 173 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFR---LYKPR 228
Query: 1202 LTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
L +M ++ P RP
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLR 257
Score = 33.7 bits (78), Expect = 0.31
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
+PEV + ++DVWS GVL + + S G P+ +S E ++++
Sbjct: 173 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 219
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 59.3 bits (144), Expect = 3e-09
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 27/169 (15%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
+ Y +G G GIV A + RN A K ++ F+N EL
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-------PFQNQTHAKRAYREL 75
Query: 232 DIMNQLCHRNLVRLHD---SYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHY 285
+M + H+N++ L + ++ + F I+ EL L + + +++
Sbjct: 76 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMEL-DHERMSYL 132
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ Q+L G+ ++H I H L P +++V L + DFGL+R +
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGT 179
Score = 38.5 bits (90), Expect = 0.012
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
L + + +++ + Q+L G+ ++H I H L P +++V L + DFG
Sbjct: 116 LCQVIQMEL-DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFG 172
Query: 528 LSRRITS 534
L+R +
Sbjct: 173 LARTAGT 179
Score = 35.4 bits (82), Expect = 0.11
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT--EFDNLRSLRH 652
+YQ + I G +V A + N+ KL + H E ++ + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 653 ERIASLLEAYKPSTTASNIA--VLVMEKLQGAD 683
+ I LL + P + +VME L A+
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVME-LMDAN 115
Score = 35.4 bits (82), Expect = 0.11
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
+L G+++LH G+ H +++P N+V+ S +K++D G + + + T
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVT--RY 191
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
+ APEV+ D+WS G + ++ G F G
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 58.8 bits (143), Expect = 4e-09
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 9/157 (5%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCHRN 241
Y+ G+ LG G V+ A + R+ A KV+ + + F+ E L H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 242 LVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
+V ++D+ E + I+ E G L + + T I L++ H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ I H + P +++++ + + DFG++R I
Sbjct: 134 QNGIIHRDVKPANIMISATN--AVKVMDFGIARAIAD 168
Score = 52.6 bits (127), Expect = 4e-07
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-----------CTQRVTKLGT 1003
L + H G+ H +++P N++++ + VK++D G TQ +GT
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 1004 LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
++ +PE + + ++DV+S G + Y +L+G PF G S
Sbjct: 183 ---------AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 37.2 bits (87), Expect = 0.028
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1180
+PE + + ++DV+S G + Y +L+G PF G S
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 34.5 bits (80), Expect = 0.17
Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 481 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
I L++ H+ I H + P +++++ + + DFG++R I
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN--AVKVMDFGIARAIAD 168
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 59.0 bits (143), Expect = 4e-09
Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 22/162 (13%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI--MNQLCHRNLVR 244
++G+G G V+ R G A KV ++ + E +I + H N++
Sbjct: 41 MVKQIGKGRYGEVWMGKWR--GEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILG 95
Query: 245 L----HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--- 297
+ +I++ G L L + + +SGL ++H
Sbjct: 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 298 -----RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ +IAH L ++LV G + D GL+ + S
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVKFIS 194
Score = 38.2 bits (89), Expect = 0.015
Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 14/138 (10%)
Query: 554 PAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVV 613
P + L+ + E + P L I Q + +I +G++ V
Sbjct: 6 PPGESLRDLIEQSQSSGSGSGLPLLVQRTIAKQI-----------QMVKQIGKGRYGEVW 54
Query: 614 KAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAV 673
+ + VA K+F + + TE +RHE I + A T +
Sbjct: 55 MGKWR-GEK--VAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111
Query: 674 LVMEKLQGADVLSYLSSR 691
L+ + + + YL S
Sbjct: 112 LITDYHENGSLYDYLKST 129
Score = 37.4 bits (87), Expect = 0.027
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 19/118 (16%)
Query: 954 SVLDGLQYLHWRGLC--------HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
S + GL +LH H +++ N+++ + + DLG + +
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK--NGTCCIADLGLAVKFISDTNEV 199
Query: 1006 HPINTPN---PEFAAPEVLAE------EPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
+ PEVL E + D++S G++ + + E
Sbjct: 200 DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257
Score = 30.1 bits (68), Expect = 4.7
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--------RLSIAHLGLTPGDLLVA 514
G L L + + +SGL ++H + +IAH L ++LV
Sbjct: 118 ENGSLYDYLKSTTL-DAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176
Query: 515 HPGGRHLLLTDFGLSRRITS 534
G + D GL+ + S
Sbjct: 177 KNG--TCCIADLGLAVKFIS 194
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 58.9 bits (143), Expect = 4e-09
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 17/178 (9%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
+G G G VY + ++S A K + G + + F E IM Q H N
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
++RL II+E G L L + ++ + +R + +G+ Y+ ++
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHP--W 356
H L ++LV ++DFGLSR + + + Y + P W
Sbjct: 168 YVHRDLAARNILVNSN--LVCKVSDFGLSRVLED-------DPEATYTTSGGKIPIRW 216
Score = 33.1 bits (76), Expect = 0.57
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
APE ++ +DVWS G++ + +++ G P+ S E + +N
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN 264
Score = 33.1 bits (76), Expect = 0.57
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
APE ++ +DVWS G++ + +++ G P+ S E + +N
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN 264
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 58.1 bits (141), Expect = 5e-09
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 26/174 (14%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI- 233
+T + IT + +G+G G V+ + G N A K+ + ++ + + E ++
Sbjct: 4 RTVARDIT----LLECVGKGRYGEVWRGSWQ--GENVAVKIFS---SRDEKSWFRETELY 54
Query: 234 -MNQLCHRNLVRL----HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
L H N++ S + +I+ G L L + +
Sbjct: 55 NTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTL-DTVSCLRIVLS 113
Query: 289 LLSGLDYMH--------RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
+ SGL ++H + +IAH L ++LV G + D GL+ +
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQ 165
Score = 40.4 bits (95), Expect = 0.003
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 19/118 (16%)
Query: 954 SVLDGLQYLHWRGLC--------HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
S+ GL +LH H +++ N+++ ++ Q + DLG ++ +
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV--KKNGQCCIADLGLAVMHSQSTNQL 170
Query: 1006 HPINTPN---PEFAAPEVLAEEPIFP------QTDVWSAGVLAYVLLSGASPFRGQSE 1054
N P + APEVL E + D+W+ G++ + + +
Sbjct: 171 DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228
Score = 36.2 bits (84), Expect = 0.055
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Query: 599 QFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASL 658
+ + +G++ V + + + VA K+F + TE N LRHE I
Sbjct: 11 TLLECVGKGRYGEVWRGSWQGEN---VAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 659 LEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR 691
+ + S +S L+ + + YL
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT 100
Score = 29.2 bits (66), Expect = 8.0
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 11/80 (13%)
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--------RLSIAHLGLTPGDLLVA 514
G L L + + + SGL ++H + +IAH L ++LV
Sbjct: 89 EMGSLYDYLQLTTL-DTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK 147
Query: 515 HPGGRHLLLTDFGLSRRITS 534
G + D GL+ +
Sbjct: 148 KNG--QCCIADLGLAVMHSQ 165
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 58.0 bits (141), Expect = 5e-09
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 31/162 (19%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+LG G G VY V + A K + + F E +M ++ H NLV+L
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 247 DSYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYM------HR 298
+ F II+E G LL L + + + + Q+ S ++Y+ HR
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 299 LSIAHLGLTPGDL-----LVAHPGGRHLL--LTDFGLSRRIT 333
DL LV G + L + DFGLSR +T
Sbjct: 136 -----------DLAARNCLV----GENHLVKVADFGLSRLMT 162
Score = 33.4 bits (77), Expect = 0.45
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFK- 1200
APE LA F ++DVW+ GVL + + + G SP+ G + + + YR + +
Sbjct: 180 APESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYR---MERP 234
Query: 1201 ELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
E E LM ++ P RP+ E H+
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Score = 33.4 bits (77), Expect = 0.47
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE LA F ++DVW+ GVL + + + G SP+ G + + +
Sbjct: 180 APESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 58.2 bits (141), Expect = 5e-09
Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 22/168 (13%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
+ + RG G V+ A A K+ + Q + E+ + + H N
Sbjct: 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSW-QNEYEVYSLPGMKHEN 79
Query: 242 LVRLHDSYETKDSFT-----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
+++ E + + +I+ G L L + ++ H + GL Y+
Sbjct: 80 ILQFI-GAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-VSWNELCHIAETMARGLAYL 137
Query: 297 H----------RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
H + +I+H + ++L+ + + DFGL+ + +
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNL--TACIADFGLALKFEA 183
Score = 38.5 bits (90), Expect = 0.011
Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 5/111 (4%)
Query: 581 SVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQV 640
V+ + Q + RG+F V KA VA K+F Q
Sbjct: 11 GVDLGTENL--YFQSMPLQLLEVKARGRFGCVWKAQLLNEY---VAVKIFPIQDKQSWQN 65
Query: 641 NTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR 691
E +L ++HE I + A K T+ L+ + + +L +
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN 116
Score = 35.5 bits (82), Expect = 0.095
Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 20/119 (16%)
Query: 954 SVLDGLQYLH-----WRGLC-----HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
++ GL YLH + H +I+ NV++ ++ + D G + G
Sbjct: 129 TMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK--NNLTACIADFGLA-LKFEAGK 185
Query: 1004 LIHPINTP--NPEFAAPEVL-----AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
+ + APEVL + F + D+++ G++ + L S + G +
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244
Score = 31.2 bits (71), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 1144 APEVL-----AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1182
APEVL + F + D+++ G++ + L S + G +
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 57.6 bits (140), Expect = 6e-09
Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 35/160 (21%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+G+G G V R G A K + K + F E +M QL H NLV+L
Sbjct: 25 LLQTIGKGEFGDVMLGDYR--GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 247 DS-YETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYM------H 297
E K I++E G L+ L +S + + + ++Y+ H
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140
Query: 298 RLSIAHLGLTPGDL-----LVAHPGGRHLL--LTDFGLSR 330
R DL LV + ++DFGL++
Sbjct: 141 R-----------DLAARNVLV----SEDNVAKVSDFGLTK 165
Score = 34.1 bits (79), Expect = 0.22
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE L E+ F ++DVWS G+L + + S G P+ + V
Sbjct: 182 APEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 227
Score = 34.1 bits (79), Expect = 0.22
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
APE L E+ F ++DVWS G+L + + S G P+ + V
Sbjct: 182 APEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 227
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 57.3 bits (139), Expect = 1e-08
Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 41/174 (23%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVMTGKGNQYKSL--FKNELDIMNQLCHRN 241
G LG+G G V A + ++ A K++ + F E M + H +
Sbjct: 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86
Query: 242 LVRL------HDSYETKDSFTIISELAGGGELLHSL------TRQSYYTEYDIAHYIRQL 289
+ +L + +I G+L L + ++ +
Sbjct: 87 VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146
Query: 290 LSGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
G++Y+ HR DL ++A + + DFGLSR+I
Sbjct: 147 ACGMEYLSSRNFIHR-----------DLAARNCMLAE--DMTVCVADFGLSRKI 187
Score = 32.3 bits (74), Expect = 0.97
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 25/98 (25%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR--YRFE--- 1196
A E LA+ ++ +DVW+ GV + +++ G +P+ G E N++ R +
Sbjct: 207 ALESLADN-LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI---YNYLIGGNRLKQPP 262
Query: 1197 ----YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
++ LM + P +RP+
Sbjct: 263 ECMEEVYD---------LMYQCWSADPKQRPSFTCLRM 291
Score = 32.3 bits (74), Expect = 1.0
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
A E LA+ ++ +DVW+ GV + +++ G +P+ G E +
Sbjct: 207 ALESLADN-LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL 252
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 56.4 bits (137), Expect = 1e-08
Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 9/149 (6%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
ELG G G+V + + A K++ +G+ + F E M +L H LV+ +
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQ-YDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFY 69
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
+ I++E G LL+ L + + + G+ ++ H
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRD 129
Query: 306 LTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
L + LV R L ++DFG++R +
Sbjct: 130 LAARNCLV----DRDLCVKVSDFGMTRYV 154
Score = 34.5 bits (80), Expect = 0.17
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFK-E 1201
APEV ++DVW+ G+L + + S G P+ + E V+ +R L++
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHR---LYRPH 228
Query: 1202 LTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
L + +M + P KRPT ++
Sbjct: 229 LASDTIYQIMYSCWHELPEKRPTFQQLLS 257
Score = 33.3 bits (77), Expect = 0.39
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
APEV ++DVW+ G+L + + S G P+ + E V+
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS 219
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 56.5 bits (137), Expect = 2e-08
Identities = 36/163 (22%), Positives = 61/163 (37%), Gaps = 30/163 (18%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
+G+G G+VYH +N A K + Q F E +M L H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 243 VRLHD-SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
+ L + ++ G+LL + + Q T D+ + Q+ G++Y+
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
HR DL ++ + + DFGL+R I
Sbjct: 145 FVHR-----------DLAARNCMLDE--SFTVKVADFGLARDI 174
Score = 32.6 bits (75), Expect = 0.69
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 13/92 (14%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFE---YL 1198
A E L F ++DVWS GVL + LL+ GA P+R + + R Y
Sbjct: 196 ALESLQTY-RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPEYC 253
Query: 1199 FKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
L Q +M ++ P RPT
Sbjct: 254 PDSLYQ-----VMQQCWEADPAVRPTFRVLVG 280
Score = 32.2 bits (74), Expect = 0.97
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
A E L F ++DVWS GVL + LL+ GA P+R + +
Sbjct: 196 ALESLQTY-RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL 241
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 56.5 bits (137), Expect = 2e-08
Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 30/163 (18%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
F + +GRG G VYH + A K + S F E IM H N+
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 243 VRLHD-SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
+ L ++ S ++ G+L + + T D+ + Q+ G+ Y+
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
HR DL ++ + + DFGL+R +
Sbjct: 149 FVHR-----------DLAARNCMLDE--KFTVKVADFGLARDM 178
Score = 30.7 bits (70), Expect = 3.3
Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 22/144 (15%)
Query: 574 DPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKA--AEKANTENLVAAKLFE 631
D LN + + P + F I RG F V + + A K
Sbjct: 3 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVK--- 59
Query: 632 YSHDTLHQVNTEFDN---------LRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGA 682
+L+++ + ++ H + SLL + ++V+ ++
Sbjct: 60 ----SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI---CLRSEGSPLVVLPYMKHG 112
Query: 683 DVLSYL-SSRHEYTEQNVATIISQ 705
D+ +++ + H T +++ Q
Sbjct: 113 DLRNFIRNETHNPTVKDLIGFGLQ 136
Score = 30.3 bits (69), Expect = 3.8
Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 21/96 (21%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFE----- 1196
A E L + F ++DVWS GVL + L++ GA P+ + + + R
Sbjct: 200 ALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYC 257
Query: 1197 --YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
L++ +ML + RP+ E
Sbjct: 258 PDPLYE---------VMLKCWHPKAEMRPSFSELVS 284
Score = 29.9 bits (68), Expect = 4.7
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
A E L + F ++DVWS GVL + L++ GA P+ + + +
Sbjct: 200 ALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 245
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 56.5 bits (137), Expect = 2e-08
Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 40/173 (23%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVMTGKGNQYKSL--FKNELDIMNQLCHRN 241
G LG G G V + A K M + + + F +E M H N
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 242 LVRL-----HDSYETKDSFTIISELAGGGELLHSL------TRQSYYTEYDIAHYIRQLL 290
++RL S + +I G+L L T + + ++ +
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 291 SGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
G++Y+ HR DL ++ + + DFGLS++I
Sbjct: 158 LGMEYLSNRNFLHR-----------DLAARNCMLRD--DMTVCVADFGLSKKI 197
Score = 33.4 bits (77), Expect = 0.41
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 21/96 (21%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFE----- 1196
A E LA+ ++ ++DVW+ GV + + + G +P+ G E + +R +
Sbjct: 217 AIESLADR-VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL-HGHRLKQPEDC 274
Query: 1197 --YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
L++ +M ++ P RPT
Sbjct: 275 LDELYE---------IMYSCWRTDPLDRPTFSVLRL 301
Score = 33.0 bits (76), Expect = 0.52
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
A E LA+ ++ ++DVW+ GV + + + G +P+ G E +
Sbjct: 217 AIESLADR-VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL 262
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 57.0 bits (138), Expect = 2e-08
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
+ Y+ +LG+G GIV+ +++R +G A K + F+N E+
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-------DAFQNSTDAQRTFREI 59
Query: 232 DIMNQLC-HRNLVRLHDSYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHYIR 287
I+ +L H N+V L + D+ ++ + LH++ R + + +
Sbjct: 60 MILTELSGHENIVNLLNVL-RADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVY 116
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
QL+ + Y+H + H + P ++L+ H+ + DFGLSR +
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAEC--HVKVADFGLSRSFVN 161
Score = 39.3 bits (92), Expect = 0.008
Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
LH++ R + + + QL+ + Y+H + H + P ++L+ H+ + DFG
Sbjct: 97 LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAEC--HVKVADFG 154
Query: 528 LSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITE 564
LSR + +T+
Sbjct: 155 LSRSFVN--IRRVTNNIPLSINENTENFDDDQPILTD 189
Score = 31.2 bits (71), Expect = 2.7
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK----LFEYSHDTLHQVNT--EFDNLR 648
KY+ + ++ +G + +V K+ ++ T +VA K F+ S D T E L
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDR-RTGEVVAVKKIFDAFQNSTDAQR---TFREIMILT 63
Query: 649 SLR-HERIASLLEAYKP 664
L HE I +LL +
Sbjct: 64 ELSGHENIVNLLNVLRA 80
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 56.1 bits (136), Expect = 2e-08
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+ LG G G V+ + A K + +G+ F E ++M QL H+ LVRL+
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 247 DSYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
T++ II+E G L+ L T + Q+ G+ ++ + H
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
L ++LV L + DFGL+R I
Sbjct: 134 DLRAANILV----SDTLSCKIADFGLARLI 159
Score = 35.6 bits (83), Expect = 0.083
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 19/119 (15%)
Query: 1113 ETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS- 1171
+ YT R AK I W+ APE + ++DVWS G+L +++
Sbjct: 161 DNEYTAREGAKFPIKWT--------------APEAINYGTFTIKSDVWSFGILLTEIVTH 206
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
G P+ G + PE QN+ YR + E LM + +K P RPT +
Sbjct: 207 GRIPYPGMTNPEVIQNLE-RGYRMVR--PDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262
Score = 34.5 bits (80), Expect = 0.20
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE + ++DVWS G+L +++ G P+ G + PE QN+
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes
(CDON)binding...; fibronectin type III, FN3; NMR {Mus
musculus} SCOP: b.1.2.1
Length = 121
Score = 52.8 bits (127), Expect = 2e-08
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 1092 DWITLANNI--DHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
DWI + I + L++ +Y FR+ A N++G SE PS + P
Sbjct: 63 DWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGSGPS 119
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 57.0 bits (138), Expect = 3e-08
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+LG G G V+ A + A K M G+ F E ++M L H LV+LH
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTK-VAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 247 DSYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ TK+ II+E G LL L S + + Q+ G+ ++ + + H
Sbjct: 250 -AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 308
Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
L ++LV L+ + DFGL+R I
Sbjct: 309 DLRAANILV----SASLVCKIADFGLARVI 334
Score = 35.1 bits (81), Expect = 0.14
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE + ++DVWS G+L +++ G P+ G S PE + +
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
Score = 35.1 bits (81), Expect = 0.14
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1188
APE + ++DVWS G+L +++ G P+ G S PE + +
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 56.3 bits (136), Expect = 3e-08
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 30/163 (18%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
F + +GRG G VYH + A K + S F E IM H N+
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 243 VRLHD-SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
+ L ++ S ++ G+L + + T D+ + Q+ G+ ++
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
HR DL ++ + + DFGL+R +
Sbjct: 213 FVHR-----------DLAARNCMLDE--KFTVKVADFGLARDM 242
Score = 30.9 bits (70), Expect = 3.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
A E L + F ++DVWS GVL + L++ GA P+ + + +
Sbjct: 264 ALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 310
Score = 30.9 bits (70), Expect = 3.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1189
A E L + F ++DVWS GVL + L++ GA P+ + + +
Sbjct: 264 ALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 310
Score = 30.9 bits (70), Expect = 3.3
Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 8/143 (5%)
Query: 568 TPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKA--AEKANTENLV 625
T+ D LN + + P + F I RG F V + +
Sbjct: 61 ANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHC 120
Query: 626 AAKLF--EYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGAD 683
A K + Q TE ++ H + SLL + ++V+ ++ D
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI---CLRSEGSPLVVLPYMKHGD 177
Query: 684 VLSYL-SSRHEYTEQNVATIISQ 705
+ +++ + H T +++ Q
Sbjct: 178 LRNFIRNETHNPTVKDLIGFGLQ 200
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet,
STRU genomics, berkeley structural genomics center,
BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Length = 137
Score = 53.1 bits (127), Expect = 3e-08
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 871 IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKL 930
+G+ H + L+ R H F + P++ +G +E+ C AVG P P IQW+
Sbjct: 1 MGSSHHHHHHSSGLVP--RGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFE 58
Query: 931 GTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIE 973
G P I + D + V Y H ++I+
Sbjct: 59 GQG-----PNDICSQLWDGARLDRVHIHATY-HQHAASTISID 95
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 55.3 bits (134), Expect = 4e-08
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 31/162 (19%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
F ELG G G+V + R + A K++ +G+ + F E +M L H LV+L+
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQ-YDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
+ II+E G LL+ L + + + + + ++Y+ HR
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR- 144
Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLL--LTDFGLSRRITS 334
DL LV + ++DFGLSR +
Sbjct: 145 ----------DLAARNCLV----NDQGVVKVSDFGLSRYVLD 172
Score = 36.4 bits (85), Expect = 0.048
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 21/120 (17%)
Query: 1113 ETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS- 1171
+ YT + +K + WS PEVL ++D+W+ GVL + + S
Sbjct: 172 DDEYTSSVGSKFPVRWS--------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
Query: 1172 GASPFRGQSEPETRQNVNFVRYRFEYLFK-ELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
G P+ + ET +++ R L++ L E +M + +RPT +
Sbjct: 218 GKMPYERFTNSETAEHIA-QGLR---LYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273
Score = 33.7 bits (78), Expect = 0.34
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVN 1062
PEVL ++D+W+ GVL + + S G P+ + ET +++
Sbjct: 189 PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 55.7 bits (134), Expect = 5e-08
Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 5/109 (4%)
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHY 285
++ M+ +N V K I +L L + R+ + + H
Sbjct: 110 VKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHI 169
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
Q+ ++++H + H L P ++ + + DFGL +
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQ 216
Score = 51.8 bits (124), Expect = 8e-07
Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 21/147 (14%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG--------CTQRVTKLGTLIHP 1007
+ +++LH +GL H +++P N+ VK+ D G ++ +
Sbjct: 174 AEAVEFLHSKGLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 1008 INTPN---PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV--N 1062
+T + +PE + + D++S G++ + LL F Q E R + +
Sbjct: 232 THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQME---RVRIITD 285
Query: 1063 FVRYRFEYLFKELTQEATRFLMLIFKH 1089
+F LF + + + +
Sbjct: 286 VRNLKFPLLFTQKYPQEHMMVQDMLSP 312
Score = 46.4 bits (110), Expect = 3e-05
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRNLV 243
++ +GRG G+V+ A + NYA K + + E+ + +L H +V
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 244 RLHDSYETKDSFT 256
R +++
Sbjct: 68 RYFNAWLETPPEK 80
Score = 44.9 bits (106), Expect = 1e-04
Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 463 PGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
L + R+ + + H Q+ ++++H + H L P ++
Sbjct: 144 RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-- 201
Query: 520 HLLLTDFGLSRRITS 534
+ + DFGL +
Sbjct: 202 VVKVGDFGLVTAMDQ 216
Score = 44.1 bits (104), Expect = 2e-04
Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV--NFVRYRFEYLFKE 1201
+PE + + D++S G++ + LL F Q E R + + +F LF +
Sbjct: 244 SPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQME---RVRIITDVRNLKFPLLFTQ 297
Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEE 1226
+ + + +P +RP +
Sbjct: 298 KYPQEHMMVQDMLSPSPTERPEATD 322
Score = 34.9 bits (80), Expect = 0.18
Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 1/115 (0%)
Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKL-FEYSHDTLHQVNTEFDNLRSLRHER 654
++ I + RG F VV +A K + N ++ +V E L L H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 655 IASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEH 709
I A+ + + L+ LSS +V +
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFST 120
Score = 32.9 bits (75), Expect = 0.57
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
++ +GRG G+V+ A + NYA K +
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRI 39
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 55.9 bits (135), Expect = 5e-08
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+LG+G G V+ + R A K + G F E +M +L H LV+L+
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGTTR-VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 247 DSYETKDSFTIISELAGGGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ +++ I++E G LL L Y + Q+ SG+ Y+ R++ H
Sbjct: 246 -AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRITS 334
L ++LV G +L+ + DFGL+R I
Sbjct: 305 DLRAANILV----GENLVCKVADFGLARLIED 332
Score = 38.6 bits (90), Expect = 0.011
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFK-E 1201
APE ++DVWS G+L L + G P+ G E V YR +
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYR---MPCPP 404
Query: 1202 LTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
E+ LM +++ P +RPT E
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPTFEYLQA 433
Score = 37.0 bits (86), Expect = 0.044
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE ++DVWS G+L L + G P+ G E V
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 55.5 bits (134), Expect = 7e-08
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 954 SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-INTPN 1012
S+L L LH + H +++P+N+++ +K+ID G + ++ I +
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTYIQS-- 262
Query: 1013 PEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
F APEV+ D+WS G + LL+G G+ E +
Sbjct: 263 -RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306
Score = 54.7 bits (132), Expect = 1e-07
Identities = 30/157 (19%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
+ Y+ +G+G G V A + ++ A K++ + ++ E+ I+ L +
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQ 153
Query: 241 ------NLVRLHDSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSG 292
N++ + +++ ++ + EL EL+ + ++ + + +L
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK-NKFQGFSLPLVRKFAHSILQC 212
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
LD +H+ I H L P ++L+ G + + DFG S
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 39.7 bits (93), Expect = 0.005
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
+ + +L LD +H+ I H L P ++L+ G + + DFG S
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 33.5 bits (77), Expect = 0.43
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1183
APEV+ D+WS G + LL+G G+ E +
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin
type III, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 117
Score = 51.2 bits (123), Expect = 8e-08
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
W T+AN++ + V+ L+ T Y F + A N G S+ S +T++ P
Sbjct: 59 SNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPS 115
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 55.3 bits (133), Expect = 9e-08
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+LG+G G V+ + R A K + G F E +M +L H LV+L+
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGTTR-VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLY 328
Query: 247 DSYETKDSFTIISELAGGGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
+ +++ I++E G LL L Y + Q+ SG+ Y+ R++ H
Sbjct: 329 -AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 387
Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRITS 334
L ++LV G +L+ + DFGL+R I
Sbjct: 388 DLRAANILV----GENLVCKVADFGLARLIED 415
Score = 39.1 bits (91), Expect = 0.010
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFK-E 1201
APE ++DVWS G+L L + G P+ G E V YR +
Sbjct: 432 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYR---MPCPP 487
Query: 1202 LTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
E+ LM +++ P +RPT E
Sbjct: 488 ECPESLHDLMCQCWRKEPEERPTFEYLQA 516
Score = 37.2 bits (86), Expect = 0.036
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE ++DVWS G+L L + G P+ G E V
Sbjct: 432 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
Score = 32.5 bits (74), Expect = 0.95
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 7/117 (5%)
Query: 575 PPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH 634
P + + + E P + + ++ +G F V N VA K +
Sbjct: 246 VCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRVAIKTLKPGT 303
Query: 635 DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR 691
+ E ++ LRHE++ L + I + V E + +L +L
Sbjct: 304 MSPEAFLQEAQVMKKLRHEKLVQLYAV----VSEEPIYI-VTEYMSKGSLLDFLKGE 355
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain,
structural genomics., NPPSFA; NMR {Homo sapiens}
Length = 120
Score = 50.8 bits (122), Expect = 1e-07
Identities = 10/56 (17%), Positives = 23/56 (41%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
+W T+ + + +L Y FR+ ++N+ G SE + + ++
Sbjct: 63 EWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDGKI 118
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 54.3 bits (131), Expect = 1e-07
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 955 VLDGLQYLHWR-GLCHLNIEPDNVVMA----SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
+L GL Y+H R G+ H +I+P+NV+M +Q+K+ DLG + + I
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQ 197
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
T E+ +PEVL P D+WS L + L++G F ++ +
Sbjct: 198 TR--EYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248
Score = 52.8 bits (127), Expect = 4e-07
Identities = 33/163 (20%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------- 237
+LG G V+ A + + + A K++ G Y ++E+ ++ ++
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSM 83
Query: 238 CHRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLS 291
++++L D + K ++ E+ G LL + + + + +QLL
Sbjct: 84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGE-NLLALIKKYEHRGIPLIYVKQISKQLLL 142
Query: 292 GLDYMHR-LSIAHLGLTPGDLLVAHP----GGRHLLLTDFGLS 329
GLDYMHR I H + P ++L+ + + D G +
Sbjct: 143 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
Score = 38.1 bits (89), Expect = 0.018
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 482 IAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHP----GGRHLLLTDFGLS 529
+ +QLL GLDYMHR I H + P ++L+ + + D G +
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
Score = 36.6 bits (85), Expect = 0.051
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1189
+PEVL P D+WS L + L++G F ++ +
Sbjct: 203 SPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 124
Score = 50.4 bits (121), Expect = 2e-07
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 1093 WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
L+N D V DL T Y+FR+ N++G S PS +T + P
Sbjct: 69 IHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPS 122
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 53.9 bits (130), Expect = 2e-07
Identities = 31/157 (19%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
D Y+ +G+G G V A +R A K++ K + + + E+ ++ +
Sbjct: 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKH 110
Query: 241 ------NLVRLHDSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSG 292
+V L + ++ ++ E+ +LL + T + + +Q+ +
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN-TNFRGVSLNLTRKFAQQMCTA 169
Query: 293 LDYMH--RLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
L ++ LSI H L P ++L+ +P + + DFG
Sbjct: 170 LLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206
Score = 49.7 bits (119), Expect = 4e-06
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 954 SVLDGLQYLHWR--GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-INT 1010
+ L +L + H +++P+N+++ + + +K++D G + +LG I+ I +
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS---CQLGQRIYQYIQS 221
Query: 1011 PNPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
F +PEVL P D+WS G + + +G F G +E +
Sbjct: 222 ---RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265
Score = 35.1 bits (81), Expect = 0.16
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 482 IAHYIRQLLSGLDYMH--RLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
+ +Q+ + L ++ LSI H L P ++L+ +P + + DFG
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206
Score = 32.0 bits (73), Expect = 1.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1183
+PEVL P D+WS G + + +G F G +E +
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265
Score = 29.3 bits (66), Expect = 9.6
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLR 651
D+Y+ S I +G F VVKA ++ + VA K+ + L+Q E L +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRV-EQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 121
Score = 50.0 bits (120), Expect = 2e-07
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 1088 KHEVDWITLANNIDHEF--WHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
++ W L ++D + VK L +Y FRL A N +G + + E P
Sbjct: 59 ENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPESGP 118
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin,
actin-associated scaffold, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 110
Score = 49.3 bits (118), Expect = 3e-07
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 887 SRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
S G P F + P + V G M C G P P + W
Sbjct: 3 SGSSGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQL 45
Score = 36.2 bits (84), Expect = 0.010
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNEN 36
D G+Y+ IA N A S S+ + V E+
Sbjct: 77 DAGIYTCIATNRAGQNSFSLELVVAAKES 105
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 52.7 bits (127), Expect = 3e-07
Identities = 27/154 (17%), Positives = 60/154 (38%), Gaps = 12/154 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLV 243
Y G +G G G+++ + + A K ++E L +
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFE--PRRSDAPQLRDEYRTYKLLAGCTGIP 69
Query: 244 RLHDSYETKDSFTIISELAGG--GELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
++ + ++ +L G +LL R+ S T A +Q+L+ + +H S
Sbjct: 70 NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAA---KQMLARVQSIHEKS 126
Query: 301 IAHLGLTPGDLLVAHPGGRH---LLLTDFGLSRR 331
+ + + P + L+ P ++ + + DFG+ +
Sbjct: 127 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160
Score = 36.9 bits (86), Expect = 0.035
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVM---ASVRSVQVKLIDLGCTQRVTKLGTLIH 1006
L +Q +H + L + +I+PDN ++ S + + ++D G + T H
Sbjct: 116 LARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH 169
Score = 34.6 bits (80), Expect = 0.16
Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH---LLLTDFGLSRR 531
Q+L+ + +H S+ + + P + L+ P ++ + + DFG+ +
Sbjct: 114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing,
ATP-binding, calcium, calmodulin-binding,
cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A
2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Length = 100
Score = 48.8 bits (117), Expect = 3e-07
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
G P P I + G L + C GEP P + W
Sbjct: 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSC 41
Score = 37.3 bits (87), Expect = 0.004
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D GLY++ N + S +V +H+
Sbjct: 74 DGGLYTLSLGNEFGSDSATVNIHIRS 99
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM
related cell adhesion molecule, fibronectin type III
domain, structural genomics; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 127
Score = 49.3 bits (118), Expect = 4e-07
Identities = 15/55 (27%), Positives = 21/55 (38%)
Query: 1093 WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
W + +L NY+FR+ A N IG S S + TK P+
Sbjct: 64 WHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDK 118
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL
structural protein; 3.30A {Oryctolagus cuniculus}
Length = 570
Score = 53.3 bits (128), Expect = 4e-07
Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 7/97 (7%)
Query: 842 DEEIDDERRNRINKYGAADTYTLRRLRHE-------IGTRPEAHVEADALIESRRDGHAP 894
E + D+ + + T + + + P + A + P
Sbjct: 139 GELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPP 198
Query: 895 FFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
FF KP+++ + +G+ KC G I W K
Sbjct: 199 FFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDN 235
Score = 49.0 bits (117), Expect = 8e-06
Identities = 12/97 (12%), Positives = 30/97 (30%), Gaps = 7/97 (7%)
Query: 842 DEEIDDERRNRINKYGAADTYTLRRLRHE-------IGTRPEAHVEADALIESRRDGHAP 894
++ ++ + + ++ H V + A++ + P
Sbjct: 43 HTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPP 102
Query: 895 FFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
F K + +G + +C G + W+K G
Sbjct: 103 SFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDG 139
Score = 46.3 bits (110), Expect = 6e-05
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
P+F E + IG+ + ++C G P+ I W+K T
Sbjct: 5 PPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHT 44
Score = 45.6 bits (108), Expect = 1e-04
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P FR+KP + + G + ++C G P + W K
Sbjct: 384 PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK 420
Score = 42.5 bits (100), Expect = 8e-04
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P F +K I V+G++++++ G + WFK
Sbjct: 477 PPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDK 515
Score = 42.5 bits (100), Expect = 0.001
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 893 APFFREKP-ITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P F +K + V + +C G P+ + W+K
Sbjct: 290 PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK 327
Score = 34.4 bits (79), Expect = 0.28
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVE 32
D G Y+ A N+A S S + V+
Sbjct: 263 GDAGQYTCYASNVAGKDSCSAQLGVQ 288
Score = 33.6 bits (77), Expect = 0.46
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNE 35
G Y+ A N T S S + + ++E
Sbjct: 168 HVGQYNCSASNPLGTASSSAKLTLSEHE 195
Score = 32.5 bits (74), Expect = 1.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y+ A N A + S S ++ V+
Sbjct: 358 DSGDYTCEAHNAAGSASSSTSLKVK 382
Score = 31.7 bits (72), Expect = 1.8
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNE 35
D G Y+ A N ++ S + +++ +
Sbjct: 72 DVGEYTCKAENSVGAVASSAVLVIKERK 99
Score = 31.3 bits (71), Expect = 2.5
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y A N + + ++ ++
Sbjct: 451 DIGEYQCKASNDVGSDTCVGSITLKA 476
Score = 30.5 bits (69), Expect = 4.1
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
+ G Y+ +N A T T+ V +
Sbjct: 544 ANAGKYTCQIKNEAGTQECFATLSVLE 570
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer,
immunoglobul domain, muscle protein, thick filament,
contractIle protein; 2.24A {Homo sapiens}
Length = 212
Score = 51.4 bits (123), Expect = 4e-07
Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 2/76 (2%)
Query: 854 NKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEM 913
+ L + A + A P + + G L +
Sbjct: 80 DGKTGHQKTV--DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNL 137
Query: 914 KCLAVGEPKPVIQWFK 929
C G+P P + W K
Sbjct: 138 TCNVWGDPPPEVSWLK 153
Score = 32.5 bits (74), Expect = 0.60
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y ++ +N + + TV V
Sbjct: 185 DSGKYGLVVKNKYGSETSDFTVSVF 209
Score = 30.6 bits (69), Expect = 2.9
Identities = 5/48 (10%), Positives = 18/48 (37%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKP 55
D+G Y + + + +V + + + Y+ + + + +
Sbjct: 70 DKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRA 117
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 53.1 bits (128), Expect = 4e-07
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 13/149 (8%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+G+G G V R G A K + K + F E +M QL H NLV+L
Sbjct: 197 LLQTIGKGEFGDVMLGDYR--GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 247 D-SYETKDSFTIISELAGGGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
E K I++E G L+ L +S + + + ++Y+ + H
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312
Query: 304 LGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
L ++LV + ++DFGL++
Sbjct: 313 RDLAARNVLV----SEDNVAKVSDFGLTK 337
Score = 35.4 bits (82), Expect = 0.13
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFK-E 1201
APE L E+ ++DVWS G+L + + S G P+ + V Y+ + +
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYK---MDAPD 409
Query: 1202 LTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
A +M + RPT + E
Sbjct: 410 GCPPAVYDVMKNCWHLDAATRPTFLQLRE 438
Score = 35.4 bits (82), Expect = 0.14
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE L E+ ++DVWS G+L + + S G P+ + V
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 399
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET,
muscle protein; NMR {Caenorhabditis elegans} SCOP:
b.1.1.4 PDB: 1wiu_A
Length = 93
Score = 48.1 bits (115), Expect = 5e-07
Identities = 7/37 (18%), Positives = 11/37 (29%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P I + G ++ +G P P W
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTV 38
Score = 33.1 bits (76), Expect = 0.085
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y + +N V V+
Sbjct: 69 DSGNYKLKVKNELGEDEAIFEVIVQ 93
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain,
immunoglobulin fold, alternative splicing, signal,
muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB:
1ncu_A 1tnm_A 1tnn_A
Length = 106
Score = 48.1 bits (115), Expect = 6e-07
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 886 ESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
S + A KP ++ V G+ C GEP P + W +
Sbjct: 7 HSSKTTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLR 50
Score = 33.9 bits (78), Expect = 0.056
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
DEG YSV+ N T+ ++
Sbjct: 81 DEGNYSVVVENSEGKQEAEFTLTIQ 105
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in
U twenty twenty, neurogenesis, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 48.2 bits (115), Expect = 8e-07
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P R+ P+ V + + C+A G P P I W K
Sbjct: 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRK 44
Score = 32.0 bits (73), Expect = 0.36
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y+ IA + + S + V++
Sbjct: 73 DTGRYTCIASTPSGEATWSAYIEVQE 98
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein,
serine/threonine-protein KI LIMB-girdle muscular
dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB:
2j8o_A 2ill_A
Length = 197
Score = 50.1 bits (120), Expect = 9e-07
Identities = 19/87 (21%), Positives = 28/87 (32%), Gaps = 13/87 (14%)
Query: 876 EAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK------ 929
A +E H P E + + G+ + +K G+P PVI W K
Sbjct: 87 SVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLID 146
Query: 930 -------LGTSTLCYLPIVIPTTHKDA 949
+ T + L KDA
Sbjct: 147 NNGHYQVIVTRSFTSLVFPNGVERKDA 173
Score = 48.6 bits (116), Expect = 3e-06
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP F+E+ + V + C G PKP+++W++
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYR 40
Score = 32.8 bits (75), Expect = 0.45
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y V A+N +V + V D
Sbjct: 172 DAGFYVVCAKNRFGIDQKTVELDVAD 197
Score = 31.6 bits (72), Expect = 0.98
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D +Y V A N ++S + ++ VE
Sbjct: 73 DATVYQVRATNQGGSVSGTASLEVE 97
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A
2f8v_A
Length = 194
Score = 49.7 bits (119), Expect = 9e-07
Identities = 9/52 (17%), Positives = 26/52 (50%)
Query: 878 HVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ A + + + P F ++ ++ V G ++ ++ G P PV+++++
Sbjct: 88 QATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYR 139
Score = 47.8 bits (114), Expect = 4e-06
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP F + ++ V+ G + G P P + WF+
Sbjct: 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFR 41
Score = 33.2 bits (76), Expect = 0.36
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNE 35
+ G YS+ A N + + + + V+
Sbjct: 74 NSGRYSLKATNGSGQATSTAELLVKAET 101
Score = 31.6 bits (72), Expect = 1.2
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G YSV A N + + + V+
Sbjct: 170 DSGTYSVNATNSVGRATSTAELLVQ 194
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling
protein,transferase; 2.21A {Rattus norvegicus}
Length = 192
Score = 49.7 bits (119), Expect = 9e-07
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP T+ ++ + C P+P I W +
Sbjct: 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTR 43
Score = 45.1 bits (107), Expect = 3e-05
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P PI + ++ G K + C +G PKP + W K
Sbjct: 100 KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGD 138
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 51.2 bits (123), Expect = 1e-06
Identities = 40/171 (23%), Positives = 61/171 (35%), Gaps = 36/171 (21%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVM-TGKGNQYKSLFKNELDIMNQLCHR 240
LG G G VY + A K + Q + F E I+++ H+
Sbjct: 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL-------TRQSYYTEYDIAHYIRQLLSGL 293
N+VR I+ EL GG+L L ++ S D+ H R + G
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 294 DYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLL-LTDFGLSRRI 332
Y+ HR D+ L+ PG + + DFG++R I
Sbjct: 154 QYLEENHFIHR-----------DIAARNCLLTCPGPGRVAKIGDFGMARDI 193
Score = 34.2 bits (79), Expect = 0.26
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 21/97 (21%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEY---- 1197
PE E IF +TD WS GVL + + S G P+ +S E + V R +
Sbjct: 213 PPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNC 270
Query: 1198 ---LFKELTQEATRFLMLI-FKRAPGKRPTVEECHEN 1230
+++ +M ++ P RP E
Sbjct: 271 PGPVYR---------IMTQCWQHQPEDRPNFAIILER 298
Score = 32.7 bits (75), Expect = 0.71
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
PE E IF +TD WS GVL + + S G P+ +S E + V
Sbjct: 213 PPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 258
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle
isozymes; IG fold, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: b.1.1.4
Length = 114
Score = 47.7 bits (114), Expect = 1e-06
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P + P V G+ +E+ G W K
Sbjct: 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMK 43
Score = 35.0 bits (81), Expect = 0.035
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
G Y+++ N + V + V D
Sbjct: 73 EHCGCYTLLVENKLGSRQAQVNLTVVD 99
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 100
Score = 47.4 bits (113), Expect = 1e-06
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P + P + + +KC A G+P PVI W K G
Sbjct: 8 PPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEG 46
Score = 32.0 bits (73), Expect = 0.23
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y+ +A + + S S + V +
Sbjct: 73 DTGTYTCVATSSSGETSWSAVLDVTE 98
>2ens_A Advanced glycosylation END product-specific receptor;
beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 96
Score = 47.0 bits (112), Expect = 1e-06
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTH 946
+P V G + + C +P P I W K G P+ +P +
Sbjct: 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGV------PLPLPPSP 57
Score = 29.7 bits (67), Expect = 1.4
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 8 DEGLYSVIARNIASTISHSVTVHV 31
D+G YS +A + + S V +
Sbjct: 68 DQGTYSCVATHSSHGPQESRAVSI 91
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila
melanogaster} PDB: 3pxj_A
Length = 212
Score = 49.8 bits (119), Expect = 1e-06
Identities = 15/62 (24%), Positives = 22/62 (35%)
Query: 870 EIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+G A + P + P T + +G + M C A+G P P I W K
Sbjct: 87 GVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIK 146
Query: 930 LG 931
Sbjct: 147 NQ 148
Score = 46.7 bits (111), Expect = 1e-05
Identities = 15/40 (37%), Positives = 17/40 (42%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
H P KP V +G C A G+P P I W K G
Sbjct: 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNG 44
>2y25_A Myomesin; structural protein, sarcomere, M-BAND,
immunoglobulin-like D; 3.50A {Homo sapiens}
Length = 317
Score = 50.7 bits (121), Expect = 1e-06
Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 2/76 (2%)
Query: 854 NKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEM 913
+ L + A + A P + + G L +
Sbjct: 185 DGKTGHQKTV--DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNL 242
Query: 914 KCLAVGEPKPVIQWFK 929
C G+P P + W K
Sbjct: 243 TCNVWGDPPPEVSWLK 258
Score = 37.6 bits (87), Expect = 0.022
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPK-PVIQWFK 929
P F E + V + +KC K I W+K
Sbjct: 7 GPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYK 43
Score = 33.0 bits (75), Expect = 0.54
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNE 35
D G Y ++ +N + + TV V E
Sbjct: 290 DSGKYGLVVKNKYGSETSDFTVSVFIPE 317
Score = 31.8 bits (72), Expect = 1.3
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G+Y VI ++ + + E
Sbjct: 72 DAGIYEVILKDDRGKDKSRLKLVDE 96
Score = 30.3 bits (68), Expect = 4.1
Identities = 5/48 (10%), Positives = 18/48 (37%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKP 55
D+G Y + + + +V + + + Y+ + + + +
Sbjct: 175 DKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRA 222
Score = 29.1 bits (65), Expect = 9.6
Identities = 2/36 (5%), Positives = 5/36 (13%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ I + + W
Sbjct: 109 IALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSH 144
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex,
alternative splicing, ATP-binding, calcium,
calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens}
PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Length = 107
Score = 47.4 bits (113), Expect = 1e-06
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 885 IESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
S G P F P + VV G + E+KC+ +GEP PV+ W K
Sbjct: 5 ASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEK 49
Score = 32.7 bits (75), Expect = 0.15
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G+Y ARN A + V V +
Sbjct: 80 DAGVYVCRARNAAGEAYAAAAVTVLE 105
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte
antigen related, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 106
Score = 47.3 bits (113), Expect = 1e-06
Identities = 9/59 (15%), Positives = 17/59 (28%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
+ + + + L + Y FR+ A N IG ++ P
Sbjct: 46 AGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQSGPS 104
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2,
angiogenesis, ATP-binding, developmental protein,
differentiation, glycoprotein; 2.70A {Homo sapiens}
Length = 108
Score = 47.3 bits (113), Expect = 1e-06
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP IG+ +E+ C A G P P I WFK
Sbjct: 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFK 46
Score = 31.5 bits (72), Expect = 0.44
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
DEGLY+ A ++ +E
Sbjct: 75 DEGLYTCQACSVLGCAKVEAFFIIE 99
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane,
cytoplasm, cytoskeleton, disease mutation,
immunoglobulin domain; NMR {Homo sapiens}
Length = 116
Score = 47.4 bits (113), Expect = 2e-06
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 887 SRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
S AP F KP + V+ GD ++++C P P + W +
Sbjct: 9 SHEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKR 51
Score = 31.2 bits (71), Expect = 0.69
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y+V A N A + + + V
Sbjct: 84 DAGWYTVSAVNEAGVTTCNTRLDVT 108
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 50.9 bits (122), Expect = 2e-06
Identities = 40/171 (23%), Positives = 61/171 (35%), Gaps = 36/171 (21%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVM-TGKGNQYKSLFKNELDIMNQLCHR 240
LG G G VY + A K + Q + F E I+++ H+
Sbjct: 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL-------TRQSYYTEYDIAHYIRQLLSGL 293
N+VR I+ EL GG+L L ++ S D+ H R + G
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 294 DYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLL-LTDFGLSRRI 332
Y+ HR D+ L+ PG + + DFG++R I
Sbjct: 195 QYLEENHFIHR-----------DIAARNCLLTCPGPGRVAKIGDFGMARDI 234
Score = 34.7 bits (80), Expect = 0.21
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 25/98 (25%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR--YRFEY-- 1197
PE E IF +TD WS GVL + + S G P+ +S E + FV R +
Sbjct: 254 PPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV---LEFVTSGGRMDPPK 309
Query: 1198 -----LFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
+++ +M ++ P RP E
Sbjct: 310 NCPGPVYR---------IMTQCWQHQPEDRPNFAIILE 338
Score = 33.5 bits (77), Expect = 0.50
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
PE E IF +TD WS GVL + + S G P+ +S E + V
Sbjct: 254 PPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 299
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 50.5 bits (121), Expect = 2e-06
Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 12/154 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLV 243
+ G ++G G G + + A K+ K E QL +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIP 68
Query: 244 RLHDSYETKDSFTIISELAGG--GELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
+++ ++ EL G +L R S T IA QL+S ++Y+H +
Sbjct: 69 QVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIA---IQLISRMEYVHSKN 125
Query: 301 IAHLGLTPGDLLV---AHPGGRHLLLTDFGLSRR 331
+ + + P + L+ + + + + DF L++
Sbjct: 126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159
Score = 36.2 bits (84), Expect = 0.069
Identities = 9/54 (16%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVM---ASVRSVQVKLIDLGCTQRVTKLGTLIH 1006
+ ++Y+H + L + +++P+N ++ + + +ID + T H
Sbjct: 115 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH 168
Score = 33.5 bits (77), Expect = 0.47
Identities = 10/47 (21%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLV---AHPGGRHLLLTDFGLSRR 531
QL+S ++Y+H ++ + + P + L+ + + + + DF L++
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 50.4 bits (121), Expect = 2e-06
Identities = 36/173 (20%), Positives = 62/173 (35%), Gaps = 40/173 (23%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVM-TGKGNQYKSLFKNELDIMNQLCHR 240
ELG+G G+VY V + ++ A K + + + F NE +M +
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL----------TRQSYYTEYDIAHYIRQLL 290
++VRL +I EL G+L L + + + ++
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 291 SGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
G+ Y+ HR DL +VA + + DFG++R I
Sbjct: 149 DGMAYLNANKFVHR-----------DLAARNCMVAE--DFTVKIGDFGMTRDI 188
Score = 33.0 bits (76), Expect = 0.53
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 25/98 (25%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR--YRFE--- 1196
+PE L + +F +DVWS GV+ + + + P++G S + + FV +
Sbjct: 208 SPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV---LRFVMEGGLLDKPD 263
Query: 1197 ----YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
LF+ LM + ++ P RP+ E
Sbjct: 264 NCPDMLFE---------LMRMCWQYNPKMRPSFLEIIS 292
Score = 30.7 bits (70), Expect = 2.8
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
+PE L + +F +DVWS GV+ + + + P++G S + + V
Sbjct: 208 SPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI
cardiomyopathy, disease mutation, disulfide bond,
immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Length = 197
Score = 48.9 bits (117), Expect = 2e-06
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 890 DGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
G AP R++ + +G+ ++ C VG P P I+W++
Sbjct: 4 SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYR 43
Score = 43.5 bits (103), Expect = 1e-04
Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 17/100 (17%)
Query: 842 DEEIDDERRNRINKYGAADTYTLRRLRHE------------IGTRPEAHVEADALIESRR 889
+E+ R+ +++ G T T+ E +G E + L+++
Sbjct: 45 GKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVG---EVETSSKLLLQATP 101
Query: 890 DGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
H + ++ +G L + + +G P P + WF
Sbjct: 102 QFHPGYPLKEKYY--GAVGSTLRLHVMYIGRPVPAMTWFH 139
Score = 33.1 bits (76), Expect = 0.33
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
DEG+Y+ IA N + S + ++
Sbjct: 74 DEGVYTCIATNEVGEVETSSKLLLQ 98
Score = 32.4 bits (74), Expect = 0.64
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
G Y V N+ T+ + V ++D
Sbjct: 171 HAGKYKVQLSNVFGTVDAILDVEIQD 196
>2crz_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 110
Score = 46.6 bits (111), Expect = 2e-06
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ + + E V L Y+FRL A N +G+ + P
Sbjct: 55 EPREVYQGSEVEC-TVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGSGP 107
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 50.1 bits (120), Expect = 2e-06
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLV 243
Y G ++G G G +Y + ++G A K+ K ++ L E I + +
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-TKHPQL-HIESKIYKMMQGGVGIP 68
Query: 244 RLHDSYETKDSFTIISELAGG--GELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
+ D ++ EL G +L + +R+ S T +A Q++S ++Y+H +
Sbjct: 69 TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLA---DQMISRIEYIHSKN 125
Query: 301 IAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRR 331
H + P + L+ G + + DFGL+++
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157
Score = 36.2 bits (84), Expect = 0.061
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVM-ASVRSVQVKLIDLGCTQRVTKLGTLIH 1006
++ ++Y+H + H +++PDN +M + V +ID G ++ T H
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166
Score = 33.9 bits (78), Expect = 0.33
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRR 531
Q++S ++Y+H + H + P + L+ G + + DFGL+++
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 49.9 bits (120), Expect = 2e-06
Identities = 40/176 (22%), Positives = 62/176 (35%), Gaps = 37/176 (21%)
Query: 187 FGDELGRGVTGIVYHA-VERSSGRNYAAKV---MTGKGNQYKSL--FKNELDIMNQL-CH 239
FG LG G G V A + A V M +EL +++ L H
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSL------------------TRQSYYTEYD 281
N+V L + +I+E G+LL+ L + D
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
+ + Q+ G+ ++ + H DL L+ H GR + DFGL+R I
Sbjct: 147 LLSFSYQVAKGMAFLASKNCIH-----RDLAARNILLTH--GRITKICDFGLARDI 195
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 99
Score = 46.2 bits (110), Expect = 3e-06
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP F V+ G ++C G P P I W
Sbjct: 11 APSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLL 47
Score = 30.4 bits (69), Expect = 0.95
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 8 DEGLYSVIARNIASTISHSVTVHV 31
D G Y+ +A N +S S V V
Sbjct: 75 DHGTYTCLAENALGQVSCSAWVTV 98
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1,
isoform 2; hydrolase, immunoglobulin domain, nucleus,
protease; 2.80A {Homo sapiens}
Length = 218
Score = 49.1 bits (117), Expect = 3e-06
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 871 IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKL 930
+G+ H + L+ P + V+ G +++ C A G P QWFK+
Sbjct: 1 MGSSHHHHHHSSGLV-----PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKM 55
Query: 931 GTS 933
Sbjct: 56 NKE 58
Score = 45.6 bits (108), Expect = 3e-05
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+P + ++ G L ++C+AVG P P QWFK
Sbjct: 118 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFK 154
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW-
type protein, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 110
Score = 46.6 bits (111), Expect = 3e-06
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 1092 DWITL-ANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
DWI + ID + + L + R+ A N G SE S KE P
Sbjct: 53 DWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKESGP 107
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 110
Score = 46.2 bits (110), Expect = 3e-06
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 887 SRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
S APFF K + G + C G PKP I WFK
Sbjct: 2 SSGSSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFK 44
Score = 31.9 bits (73), Expect = 0.33
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNENE 37
D+G Y+++A N IS + + V+ +
Sbjct: 77 DDGNYTIMAANPQGRISCTGRLMVQAVNSG 106
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold,
glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4
b.1.1.4 PDB: 2ncm_A 3ncm_A
Length = 191
Score = 48.3 bits (115), Expect = 3e-06
Identities = 9/40 (22%), Positives = 12/40 (30%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
F+ P G+ + C V P I W G
Sbjct: 100 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGR 139
Score = 38.7 bits (90), Expect = 0.005
Identities = 9/43 (20%), Positives = 13/43 (30%), Gaps = 1/43 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPK-PVIQWFKLGTSTL 935
P + +G+ C G+ K I WF L
Sbjct: 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKL 45
Score = 30.9 bits (70), Expect = 1.6
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
DEG Y R +A + + V
Sbjct: 166 DEGTYRCEGRILARGEINFKDIQVI 190
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein
binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP:
b.1.2.1
Length = 115
Score = 46.4 bits (110), Expect = 3e-06
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 12/70 (17%)
Query: 1088 KHEVDWITLANNIDHEFWH------------VKDLKRETNYTFRLSAKNVIGWSEKGIPS 1135
+W T +NI + V DLK + Y FR+ A +++ S
Sbjct: 44 GKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTS 103
Query: 1136 ALFKTKEQAP 1145
A F + A
Sbjct: 104 AKFYLQPGAA 113
>1x5x_A Fibronectin type-III domain containing protein 3A; structural
genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 109
Score = 46.2 bits (110), Expect = 4e-06
Identities = 12/54 (22%), Positives = 20/54 (37%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ + + VK+L+R T Y F++ A N G S + P
Sbjct: 53 YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGP 106
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK
protein, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: b.1.2.1
Length = 120
Score = 46.5 bits (110), Expect = 4e-06
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ + V+ L+ T Y FRL + G E ++ T+E P
Sbjct: 65 SYGVIYTGYATRH-VVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESGP 117
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type
III domain containing protein, cytoskeleton, muscle
contraction; NMR {Mus musculus} SCOP: b.1.2.1
Length = 111
Score = 45.8 bits (109), Expect = 4e-06
Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 1092 DWITLAN-NIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+W+ ++ + VKDL FR+ N+ G SE +E P
Sbjct: 54 EWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRESGP 108
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 49.2 bits (118), Expect = 4e-06
Identities = 37/176 (21%), Positives = 60/176 (34%), Gaps = 37/176 (21%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMT--------GKGNQYKSLFKNELDIMNQL- 237
G LG G G V A ++ + +T + S +E+++M +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL----------------TRQSYYTEYD 281
H+N++ L + +I E A G L L + T D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
+ QL G++Y+ H DL LV + + DFGL+R I
Sbjct: 159 LVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTE--NNVMKIADFGLARDI 207
Score = 31.1 bits (71), Expect = 2.2
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFK- 1200
APE L + ++ Q+DVWS GVL + + + G SP+ G E + + +R + K
Sbjct: 227 APEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK-EGHRMD---KP 281
Query: 1201 ELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
+M + P +RPT ++ E
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Score = 30.7 bits (70), Expect = 2.8
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE L + ++ Q+DVWS GVL + + + G SP+ G E + +
Sbjct: 227 APEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1,
NCAM-120, CD56 antigen, membra protein, glycoprotein,
structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo
sapiens}
Length = 122
Score = 46.3 bits (110), Expect = 4e-06
Identities = 14/55 (25%), Positives = 17/55 (30%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
W + LK ET Y RL+A N G E S + P
Sbjct: 56 KWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPS 110
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation,
immunoglobulin domain, membrane, glycoprote adhesion,
transmembrane; HET: NAG; 2.00A {Homo sapiens}
Length = 189
Score = 47.9 bits (114), Expect = 5e-06
Identities = 9/39 (23%), Positives = 12/39 (30%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
FRE G+ E+ C P P + W
Sbjct: 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHN 40
Score = 42.1 bits (99), Expect = 4e-04
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
A +K G+++ C A G P+P I WF+
Sbjct: 98 AISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR 134
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A
{Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Length = 205
Score = 47.8 bits (114), Expect = 5e-06
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 1092 DWITLANNI-DHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
W + + + V + NYTFR+ A N IG S S T+ P
Sbjct: 50 SWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPF 105
Score = 32.8 bits (75), Expect = 0.55
Identities = 8/52 (15%), Positives = 14/52 (26%), Gaps = 1/52 (1%)
Query: 1092 DWITLA-NNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKE 1142
W + + D Y ++ A N G S + + E
Sbjct: 152 AWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE 203
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein;
1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Length = 284
Score = 48.6 bits (116), Expect = 5e-06
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
PFF KP+++ + +G+ KC G I W K
Sbjct: 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAK 41
Score = 46.3 bits (110), Expect = 3e-05
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P FR+KP + + G + ++C G P + W K
Sbjct: 192 PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK 228
Score = 41.6 bits (98), Expect = 0.001
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 893 APFFREKP-ITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P F +K + V + +C G P+ + W+K
Sbjct: 98 PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK 135
Score = 33.2 bits (76), Expect = 0.51
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y+ A N+A S S + V+
Sbjct: 72 DAGQYTCYASNVAGKDSCSAQLGVQ 96
Score = 31.6 bits (72), Expect = 1.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y+ A N A + S S ++ V++
Sbjct: 166 DSGDYTCEAHNAAGSASSSTSLKVKE 191
Score = 30.5 bits (69), Expect = 3.3
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y A N + + ++ ++
Sbjct: 259 DIGEYQCKASNDVGSYTCVGSITLK 283
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte
antigen related, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 107
Score = 45.5 bits (108), Expect = 6e-06
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPS-ALFKTKEQAP 1145
E T+ D + + V L + T Y FRL+AKN G E +T E
Sbjct: 47 ADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGE---EFEKEIRTPEDLS 102
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation,
immunoglobulin domain, IG, membrane, homphilic,
glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB:
2xy2_A* 2vaj_A
Length = 189
Score = 47.5 bits (113), Expect = 6e-06
Identities = 9/40 (22%), Positives = 12/40 (30%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
FRE G+ E+ C P P + W
Sbjct: 96 KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNE 135
Score = 46.3 bits (110), Expect = 1e-05
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ + +G+ C A+GEP+ + + G
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQG 40
Score = 29.8 bits (67), Expect = 4.9
Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 4/28 (14%)
Query: 8 DEGLYSVIARNIASTISHS----VTVHV 31
DEG+Y R A V V+V
Sbjct: 162 DEGIYRCEGRVEARGEIDFRDIIVIVNV 189
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane,
transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo
sapiens}
Length = 291
Score = 48.7 bits (116), Expect = 6e-06
Identities = 9/39 (23%), Positives = 12/39 (30%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
FRE G+ E+ C P P + W
Sbjct: 98 KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHN 136
Score = 41.3 bits (97), Expect = 0.001
Identities = 6/37 (16%), Positives = 14/37 (37%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ + +G+ C A+GEP+ + +
Sbjct: 4 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNP 40
Score = 41.0 bits (96), Expect = 0.002
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 893 APFFR--EKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P +K G+++ C A G P+P I WF+
Sbjct: 192 PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR 230
Score = 29.8 bits (67), Expect = 6.6
Identities = 7/26 (26%), Positives = 8/26 (30%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y A N A + V
Sbjct: 259 DGGPYVCRATNKAGEDEKQAFLQVFV 284
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Length = 305
Score = 48.6 bits (116), Expect = 6e-06
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
W+ + + + V +L +T+Y FR+ A+N G S+ PS TKE
Sbjct: 244 RWLRVGQARETRY-TVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKTRA 298
Score = 45.5 bits (108), Expect = 6e-05
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
AP F+E+ + V + C G PKP+++W++ G +
Sbjct: 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEII 46
Score = 45.5 bits (108), Expect = 7e-05
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 876 EAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
A +E H P E + + G+ + +K G+P PVI W K
Sbjct: 87 SVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK 140
Score = 31.7 bits (72), Expect = 1.7
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTVHVED 33
D +Y V A N ++S + ++ VE
Sbjct: 68 SVTDDDATVYQVRATNQGGSVSGTASLEVEV 98
Score = 30.1 bits (68), Expect = 4.5
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y V A+N +V + V D
Sbjct: 172 DAGFYVVCAKNRFGIDQKTVELDVAD 197
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo
sapiens}
Length = 103
Score = 45.4 bits (108), Expect = 6e-06
Identities = 7/38 (18%), Positives = 13/38 (34%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
HAP + + V G +P ++W+
Sbjct: 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYH 44
Score = 31.5 bits (72), Expect = 0.36
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTVHVEDNE 35
DC D G Y + N S T+ V +
Sbjct: 70 DCHTDDSGTYRAVCTNYKGEASDYATLDVTGGD 102
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein,
cell membrane, cytoplasm, cytoskeleton, disease
mutation, immunoglobulin domain; NMR {Homo sapiens}
Length = 100
Score = 45.0 bits (107), Expect = 6e-06
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P F + P + + G M G P P + W+
Sbjct: 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYL 41
Score = 33.8 bits (78), Expect = 0.052
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNE 35
D G Y+ +A+N A + +V + V E
Sbjct: 73 DAGAYACVAKNRAGEATFTVQLDVLAKE 100
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo
sapiens}
Length = 99
Score = 45.0 bits (107), Expect = 7e-06
Identities = 9/37 (24%), Positives = 11/37 (29%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P V + A GEP+P W K
Sbjct: 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTK 42
Score = 31.5 bits (72), Expect = 0.39
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTVHVE 32
D GLY+ +N A ++S S + ++
Sbjct: 68 KTDTSDSGLYTCTVKNSAGSVSSSCKLTIK 97
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular
adhesion, ligand-independent DIME mutational analysis,
transferase; HET: EPE; 1.96A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.4
Length = 182
Score = 47.1 bits (112), Expect = 7e-06
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P+ + V G +++ C G +P IQW K G
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDG 40
Score = 43.6 bits (103), Expect = 1e-04
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGT 932
PFF +P + V ++ C AVG P+PV I W++ T
Sbjct: 98 VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTT 138
Score = 31.7 bits (72), Expect = 0.96
Identities = 7/27 (25%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 7 RDEGLYSVIARNIA-STISHSVTVHVE 32
++S A N+ S + TVH++
Sbjct: 156 TQSTMFSCEAHNLKGLASSRTATVHLQ 182
Score = 29.8 bits (67), Expect = 4.5
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 7 RDEGLYSVIARNIA-STISHSVTVHVE 32
D G Y + + IS V + VE
Sbjct: 70 SDAGRYWCQVEDGGETEISQPVWLTVE 96
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 48.4 bits (116), Expect = 7e-06
Identities = 49/183 (26%), Positives = 69/183 (37%), Gaps = 39/183 (21%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL-CHRNL 242
F D +G G G V A + G A + K F EL+++ +L H N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI----------RQLL-- 290
+ L + E + + E A G LL L R+S E D A I +QLL
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 291 -----SGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSR-----RITSF 335
G+DY+ + H DL LV + DFGLSR +
Sbjct: 148 AADVARGMDYLSQKQFIH-----RDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKTM 200
Query: 336 GKL 338
G+L
Sbjct: 201 GRL 203
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1
(isoform 2); hydrolase, immunoglobulin domain, nucleus,
protease; 1.15A {Homo sapiens}
Length = 91
Score = 44.6 bits (106), Expect = 8e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
G +P + ++ G L ++C+AVG P P QWFK
Sbjct: 1 GSKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNEL 42
Score = 29.6 bits (67), Expect = 1.6
Identities = 6/30 (20%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 8 DEGLYSVIARNIASTI-SHSVTVHVEDNEN 36
+G Y N + S V + +++ N
Sbjct: 61 HQGTYWCHVYNDRDSQDSKKVEIIIDELNN 90
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 48.5 bits (116), Expect = 9e-06
Identities = 39/184 (21%), Positives = 59/184 (32%), Gaps = 53/184 (28%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY-----KSL-----------FKNE 230
G LG G G V A A + K + K L +E
Sbjct: 85 LGKPLGEGCFGQVVMA--------EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 231 LDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL----------------TR 273
+++M + H+N++ L + +I E A G L L
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 274 QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGL 328
+ T D+ QL G++Y+ H DL LV + + DFGL
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTE--NNVMKIADFGL 249
Query: 329 SRRI 332
+R I
Sbjct: 250 ARDI 253
Score = 33.1 bits (76), Expect = 0.63
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 21/96 (21%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFE----- 1196
APE L + ++ Q+DVWS GVL + + + G SP+ G E + + +R +
Sbjct: 273 APEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK-EGHRMDKPANC 330
Query: 1197 --YLFKELTQEATRFLML-IFKRAPGKRPTVEECHE 1229
L+ +M + P +RPT ++ E
Sbjct: 331 TNELYM---------MMRDCWHAVPSQRPTFKQLVE 357
Score = 30.8 bits (70), Expect = 3.0
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE L + ++ Q+DVWS GVL + + + G SP+ G E + +
Sbjct: 273 APEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 318
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein;
2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Length = 154
Score = 46.0 bits (109), Expect = 9e-06
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Query: 858 AADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLA 917
A+ + + +A +E A + P+F + + + VV G C
Sbjct: 9 ASGSSPTSPINANKVENEDAFLEEVAEEKPHV---KPYFTKTILDMEVVEGSAARFDCKV 65
Query: 918 VGEPKPVIQWFK 929
G P P + WFK
Sbjct: 66 EGYPDPEVMWFK 77
Score = 30.2 bits (68), Expect = 2.7
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTVHVE 32
+ G D+ Y+ A N + + + VE
Sbjct: 104 EVCGDDDAKYTCKAVNSLGEATCTAELLVE 133
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG
B3P; 2.60A {Homo sapiens}
Length = 304
Score = 47.9 bits (114), Expect = 1e-05
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS 933
P F ++P V G C A G+PKP + W K G
Sbjct: 6 PPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKK 46
Score = 47.9 bits (114), Expect = 1e-05
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 881 ADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ A + R AP F P++ ++ G + + C+AVG P P ++W +
Sbjct: 193 SPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQ 241
Score = 47.1 bits (112), Expect = 2e-05
Identities = 15/48 (31%), Positives = 16/48 (33%)
Query: 884 LIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
L E + P P V M C A G P P I WFK
Sbjct: 99 LREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDF 146
Score = 32.9 bits (75), Expect = 0.72
Identities = 5/27 (18%), Positives = 11/27 (40%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
+D Y+ +A + I + V+
Sbjct: 265 KDSANYTCVAMSSLGVIEAVAQITVKS 291
Score = 31.3 bits (71), Expect = 1.9
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
RDE +Y +A+N I+ + V
Sbjct: 74 RDENVYECVAQNSVGEITVHAKLTVLR 100
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural
genomics, IG-fold I-SET, RGD motif, homophilic adhesion,
arterial smooth muscle cells; 0.96A {Homo sapiens}
Length = 99
Score = 44.6 bits (106), Expect = 1e-05
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P F+ + V G + M GEPKPV+ W +
Sbjct: 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLR 41
Score = 30.7 bits (70), Expect = 0.69
Identities = 6/25 (24%), Positives = 8/25 (32%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y+ A N + V
Sbjct: 73 DAGFYTCKAVNEYGARQCEARLEVR 97
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB:
2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Length = 212
Score = 47.1 bits (112), Expect = 1e-05
Identities = 14/44 (31%), Positives = 15/44 (34%)
Query: 886 ESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
E + P P V M C A G P P I WFK
Sbjct: 101 EDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFK 144
Score = 45.6 bits (108), Expect = 4e-05
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P F P+ V G C A G+P+P I W K
Sbjct: 6 PPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNK 42
Score = 33.6 bits (77), Expect = 0.25
Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 8 DEGLYSVIARNIA-STISHSVTVHVEDNENEYSY 40
D+G Y +A N A + S ++V ++ + +
Sbjct: 178 DQGKYECVATNSAGTRYSAPANLYVRGTKHHHHH 211
Score = 32.9 bits (75), Expect = 0.42
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVEDNE 35
RDE +Y +A N IS S + V +
Sbjct: 74 RDEAIYECVASNNVGEISVSTRLTVLRED 102
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain,
beta-sandwhich, I-SET, structural protein; 2.10A {Homo
sapiens} SCOP: b.1.1.4
Length = 99
Score = 44.6 bits (106), Expect = 1e-05
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP E+ + V G + VG+P P +W+K
Sbjct: 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYK 41
Score = 31.9 bits (73), Expect = 0.27
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTVHVE 32
D G D V A NIA S + V+
Sbjct: 68 DVTGEDSASIMVKAINIAGETSSHAFLLVQ 97
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 47.7 bits (114), Expect = 1e-05
Identities = 35/177 (19%), Positives = 57/177 (32%), Gaps = 44/177 (24%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
ELG G G V+ A + A K + + F+ E +++ L H++
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL---------------TRQSYYTEYDIAHYI 286
+VR ++ E G+L L +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 287 RQLLSGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
Q+ +G+ Y+ HR DL LV G + + DFG+SR I
Sbjct: 165 SQVAAGMVYLAGLHFVHR-----------DLATRNCLVGQ--GLVVKIGDFGMSRDI 208
Score = 35.7 bits (83), Expect = 0.088
Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 24/109 (22%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFE----- 1196
PE + F ++DVWS GV+ + + + G P+ S E + E
Sbjct: 228 PPESILYR-KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT-QGRELERPRAC 285
Query: 1197 --YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE--NRWL-VPSEYM 1239
++ +M ++R P +R ++++ H P Y+
Sbjct: 286 PPEVYA---------IMRGCWQREPQQRHSIKDVHARLQALAQAPPVYL 325
Score = 32.7 bits (75), Expect = 0.71
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
PE + F ++DVWS GV+ + + + G P+ S E +
Sbjct: 228 PPESILYR-KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 273
>1x3d_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 118
Score = 44.7 bits (106), Expect = 2e-05
Identities = 10/58 (17%), Positives = 16/58 (27%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ + + L FRLSA+N G S + + P
Sbjct: 58 GKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGP 115
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion
comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Length = 201
Score = 46.0 bits (109), Expect = 2e-05
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ + + ++G + ++C A+G P P I+W K+
Sbjct: 112 YPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVL 151
Score = 36.0 bits (83), Expect = 0.042
Identities = 7/38 (18%), Positives = 12/38 (31%), Gaps = 2/38 (5%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKP--VIQWFK 929
PF E+ + V G + + C +W
Sbjct: 9 PFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLL 46
Score = 33.3 bits (76), Expect = 0.37
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
DEG+Y A NI H ++V+
Sbjct: 176 DEGIYECEAENIRGKDKHQARIYVQ 200
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell
adhesion, transmembrane, disulfide bond, alternative
splicing; HET: NAG; 1.95A {Rattus norvegicus}
Length = 190
Score = 46.0 bits (109), Expect = 2e-05
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
AP + G M C +VG P P W K
Sbjct: 92 APDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKE 130
Score = 39.4 bits (92), Expect = 0.002
Identities = 6/41 (14%), Positives = 11/41 (26%), Gaps = 2/41 (4%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQ--WFKLG 931
P I + ++C ++ W K G
Sbjct: 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNG 43
Score = 31.4 bits (71), Expect = 1.4
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 8 DEGLYSVIARNIASTISHSVTVHV 31
D G Y A N + S S + V
Sbjct: 165 DPGEYECNATNSIGSASVSTVLRV 188
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation,
phosphorylation, disease MU neuronal development,
immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens}
PDB: 2v9q_A
Length = 212
Score = 46.0 bits (109), Expect = 2e-05
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 888 RRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
R++ P E P + V G+ + C A G P P I+W+K
Sbjct: 4 RQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYK 45
Score = 42.5 bits (100), Expect = 3e-04
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFK 929
FR+ P + V +G+ M+C G P+P I W K
Sbjct: 111 RDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKK 148
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 47.2 bits (112), Expect = 2e-05
Identities = 39/216 (18%), Positives = 68/216 (31%), Gaps = 33/216 (15%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL--- 237
Y +LG G V+ + + + A KV+ Y +E+ ++ +
Sbjct: 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS-AEHYTETALDEIRLLKSVRNS 93
Query: 238 -----CHRNLVRLHDSYETKDSFTIIS----------ELAGGGELLHSLTRQSYY---TE 279
+V+L D F I E+ G L +S Y
Sbjct: 94 DPNDPNREMVVQLLDD------FKISGVNGTHICMVFEVLG--HHLLKWIIKSNYQGLPL 145
Query: 280 YDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
+ I+Q+L GLDY+H I H + P ++L++ + + G
Sbjct: 146 PCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN--EQYIRRLAAEATEWQRSGAP 203
Query: 339 NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTD 374
P V + +N + K E D
Sbjct: 204 PPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIAD 239
Score = 43.4 bits (102), Expect = 4e-04
Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 52/150 (34%)
Query: 955 VLDGLQYLHWR-GLCHLNIEPDNVVMAS-------------------------------- 981
VL GL YLH + + H +I+P+N++++
Sbjct: 155 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 214
Query: 982 ---------------VRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026
++VK+ DLG V K T I T ++ + EVL
Sbjct: 215 ATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT--EDIQTR--QYRSLEVLIGSGY 270
Query: 1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
D+WS +A+ L +G F S E
Sbjct: 271 NTPADIWSTACMAFELATGDYLFEPHSGEE 300
Score = 38.7 bits (90), Expect = 0.012
Identities = 26/135 (19%), Positives = 42/135 (31%), Gaps = 45/135 (33%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN---------------- 1187
+ EVL D+WS +A+ L +G F S E ++
Sbjct: 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPR 320
Query: 1188 -------------------VNFVRYRFEYLFKELTQ----------EATRFLMLIFKRAP 1218
+ + + LF+ L + T FL+ + + P
Sbjct: 321 KLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIP 380
Query: 1219 GKRPTVEECHENRWL 1233
KR T EC + WL
Sbjct: 381 EKRATAAECLRHPWL 395
Score = 35.7 bits (82), Expect = 0.095
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 463 PGGELLHSLTRQSYY---TEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHP 516
G L +S Y + I+Q+L GLDY+H I H + P ++L++
Sbjct: 126 VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell
adhesion, immunoglobulin domain; 3.2A {Drosophila
melanogaster} PDB: 2vra_A*
Length = 217
Score = 46.0 bits (109), Expect = 2e-05
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+P E P + V + + C G+P+P I+WFK G
Sbjct: 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDG 47
Score = 42.5 bits (100), Expect = 3e-04
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFK 929
FR +P V G+ ++C G P+P + W K
Sbjct: 108 RDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIK 145
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 47.0 bits (112), Expect = 3e-05
Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 25/183 (13%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
+ G ++G G G++Y A + A V+ + + LF +EL ++ ++ ++
Sbjct: 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLF-SELKFYQRVAKKDCIK 97
Query: 245 LHDSYETKDSFTI-------ISELAGGG------ELL-HSLT-------RQSYYTEYDIA 283
+ D I ++E G E L L T +
Sbjct: 98 KWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLG 157
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEY 343
++L L+Y+H H + +LL+ + + L D+GLS R G +
Sbjct: 158 ---IRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQE 214
Query: 344 DVR 346
+ R
Sbjct: 215 NPR 217
Score = 42.8 bits (101), Expect = 6e-04
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH 1006
LD L+Y+H H +I+ N+++ QV L D G + R G
Sbjct: 161 LDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQ 211
Score = 37.8 bits (88), Expect = 0.022
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNG 546
++L L+Y+H H + +LL+ + + L D+GLS R G +
Sbjct: 159 RMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPR 217
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 46.9 bits (112), Expect = 3e-05
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 19/148 (12%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCH 239
+ +A+ ++G G G V + + YA KV+ + + Y K E DI+ ++ +
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV--RNIKKYTRSAKIEADILKKIQN 90
Query: 240 R-----NLVRLHDSYETKDSFTIISELAGGGELLHSL------TRQSYYTEYDIAHYIRQ 288
N+V+ H + D +I E L SL + + DI Y +
Sbjct: 91 DDINNNNIVKYHGKFMYYDHMCLIFEP-----LGPSLYEIITRNNYNGFHIEDIKLYCIE 145
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHP 316
+L L+Y+ ++S+ H L P ++L+ P
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDP 173
Score = 34.6 bits (80), Expect = 0.21
Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 37/130 (28%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMAS-----------------------VRSVQVKLID 991
+L L YL L H +++P+N+++ +S +KLID
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLID 205
Query: 992 LGCT----QRVTKLGTLIHPINTPNPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA 1046
GC + INT APEV+ +D+WS G + L +G+
Sbjct: 206 FGCATFKSDYHGSI------INT---RQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256
Query: 1047 SPFRGQSEPE 1056
FR E
Sbjct: 257 LLFRTHEHME 266
Score = 32.3 bits (74), Expect = 1.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 516
I Y ++L L+Y+ ++S+ H L P ++L+ P
Sbjct: 139 IKLYCIEILKALNYLRKMSLTHTDLKPENILLDDP 173
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 46.5 bits (111), Expect = 3e-05
Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 33/172 (19%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGN---QYKSLFKNELDIMNQL-CH 239
FG LG G G V A G+ A V K K +EL IM+ L H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSL--------------TRQSYYTEYDIAHY 285
N+V L + +I+E G+LL+ L S + D+ H+
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
Q+ G+ ++ + H D+ L+ + G + DFGL+R I
Sbjct: 170 SSQVAQGMAFLASKNCIH-----RDVAARNVLLTN--GHVAKIGDFGLARDI 214
Score = 30.3 bits (69), Expect = 3.7
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 16/94 (17%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR--YRFE--- 1196
APE + + ++ Q+DVWS G+L + + S G +P+ G + V+ Y+
Sbjct: 234 APESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPYPGI--LVNSKFYKLVKDGYQMAQPA 290
Query: 1197 YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
+ K + +M + P RPT ++
Sbjct: 291 FAPKNIYS-----IMQACWALEPTHRPTFQQICS 319
Score = 29.9 bits (68), Expect = 5.5
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRG 1051
APE + + ++ Q+DVWS G+L + + S G +P+ G
Sbjct: 234 APESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30,
N-terminal eight IG domains...; immunoglobulin domain;
HET: NAG NDG; 4.19A {Drosophila melanogaster}
Length = 816
Score = 47.2 bits (112), Expect = 3e-05
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 879 VEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
EA A ++ P R+ + G + +KC+A G P P I W G
Sbjct: 415 AEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGK 468
Score = 45.3 bits (107), Expect = 1e-04
Identities = 10/39 (25%), Positives = 12/39 (30%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ P T V G C G P + W K G
Sbjct: 343 PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDG 381
Score = 42.6 bits (100), Expect = 0.001
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 890 DGHAPFFREKPI-TIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS 933
D P F ++P I E++C A G P P I W + +
Sbjct: 35 DQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGT 79
Score = 42.2 bits (99), Expect = 0.001
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTST 934
P + +P G +++C A G PKP + W K T
Sbjct: 713 VPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDT 755
Score = 41.1 bits (96), Expect = 0.003
Identities = 19/133 (14%), Positives = 34/133 (25%), Gaps = 18/133 (13%)
Query: 813 FNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYG-----------AADT 861
CL S V+ + + + + + G +
Sbjct: 158 IKCLIPSFVADF---VEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKS 214
Query: 862 YTLRRLRHEIGTRPEAHVEADALIESR-RDGHAP--FFREKPITIPVVIGDKLEMKCLAV 918
Y R +H + L+ + P K + + C A
Sbjct: 215 YQCR-TKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQ 273
Query: 919 GEPKPVIQWFKLG 931
G P PV +W+K
Sbjct: 274 GYPVPVFRWYKFI 286
Score = 39.5 bits (92), Expect = 0.009
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P+ R + +V G+ L + C G P I W +
Sbjct: 526 GLPYIR-QMEKKAIVAGETLIVTCPVAGYPIDSIVWER 562
Score = 38.8 bits (90), Expect = 0.014
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 9/59 (15%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLA---VGEPKPVIQWFKLGTSTLCYLPIVIPTTHKD 948
A ++ V+ G+ +KCL V + V+ W P D
Sbjct: 138 AQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEE------ENYFPGAEYD 190
Score = 35.3 bits (81), Expect = 0.17
Identities = 9/39 (23%), Positives = 12/39 (30%), Gaps = 1/39 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLG 931
P +G L + C G P+ I W G
Sbjct: 620 RIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDG 658
Score = 33.0 bits (75), Expect = 0.86
Identities = 6/25 (24%), Positives = 8/25 (32%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y + N S + V
Sbjct: 317 DSGKYLCVVNNSVGGESVETVLTVT 341
Score = 32.2 bits (73), Expect = 1.2
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D GLY IA++ HS ++V
Sbjct: 501 DGGLYKCIAKSKVGVAEHSAKLNVYG 526
Score = 32.2 bits (73), Expect = 1.2
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
G ++ ARN+A + ++V
Sbjct: 687 SHAGNFTCHARNLAGHQQFTTPLNVYV 713
Score = 31.8 bits (72), Expect = 1.9
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNE 35
D+G+Y RN + S + +
Sbjct: 400 DKGMYQCFVRNDRESAEASAELKLGGRF 427
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III
repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 43.1 bits (102), Expect = 3e-05
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTK 1141
W + LK ET Y RL+A N G E S FKT+
Sbjct: 55 KWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASE-FKTQ 103
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 46.6 bits (111), Expect = 3e-05
Identities = 35/176 (19%), Positives = 59/176 (33%), Gaps = 37/176 (21%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMT--------GKGNQYKSLFKNELDIMNQL- 237
G LG G G V A ++ +V + S +E+++M +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL----------------TRQSYYTEYD 281
H+N++ L + +I E A G L L + + D
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
+ Q+ G++Y+ H DL LV + + DFGL+R I
Sbjct: 193 LVSCAYQVARGMEYLASKKCIH-----RDLAARNVLVTE--DNVMKIADFGLARDI 241
Score = 31.2 bits (71), Expect = 2.1
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 25/98 (25%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR--YRFE--- 1196
APE L + I+ Q+DVWS GVL + + + G SP+ G E ++ +R +
Sbjct: 261 APEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL---FKLLKEGHRMDKPS 316
Query: 1197 ----YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
L+ +M + P +RPT ++ E
Sbjct: 317 NCTNELYM---------MMRDCWHAVPSQRPTFKQLVE 345
Score = 30.8 bits (70), Expect = 3.5
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE L + I+ Q+DVWS GVL + + + G SP+ G E + +
Sbjct: 261 APEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 306
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein
complex, receptor tyrosine kinas binding, immunoglobulin
domain, kinase, membrane, nucleotid binding; HET: NAG;
2.10A {Homo sapiens}
Length = 241
Score = 45.7 bits (108), Expect = 3e-05
Identities = 11/45 (24%), Positives = 16/45 (35%)
Query: 885 IESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ R P V+G +E C + +P IQW K
Sbjct: 106 VLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLK 150
Score = 41.5 bits (97), Expect = 0.001
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Query: 886 ESRRDGHAPFFREKPITIP----VVIGDKLEMKCLAVGEPKPVIQWFKLG 931
++ D AP++ V + + +C A G P P I W K G
Sbjct: 4 DTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNG 53
Score = 32.2 bits (73), Expect = 0.79
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNENE 37
D G Y+ + N +I + T+ V +
Sbjct: 83 DRGNYTCVVENKFGSIRQTYTLDVLERSPH 112
Score = 30.3 bits (68), Expect = 3.3
Identities = 6/26 (23%), Positives = 8/26 (30%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y A N + + V
Sbjct: 193 DGGEYLCRATNFIGVAEKAFWLSVHG 218
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain,
immunoglobulin superfamily, transmembrane,
phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A
{Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Length = 389
Score = 46.7 bits (111), Expect = 3e-05
Identities = 9/54 (16%), Positives = 19/54 (35%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
W + ++ + +L+ T Y R++A N G + + P
Sbjct: 241 IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREP 294
Score = 43.6 bits (103), Expect = 3e-04
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP F G+ + + C P I W +
Sbjct: 100 APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRR 136
Score = 38.2 bits (89), Expect = 0.017
Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 1093 WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
W+ + + ++ L+ Y +++A N +G+SE P+ + P
Sbjct: 339 WLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSE---PTVYEFSMPPKP 388
Score = 37.5 bits (87), Expect = 0.030
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 899 KPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ ++ + C A GEP P I W +
Sbjct: 6 QLKNETTYENGQVTLVCDAEGEPIPEITWKRAV 38
Score = 31.3 bits (71), Expect = 2.0
Identities = 7/31 (22%), Positives = 11/31 (35%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTVHVED 33
D D G Y A + S+ + +E
Sbjct: 69 DVKLSDSGRYDCEAASRIGGHQKSMYLDIEY 99
Score = 30.9 bits (70), Expect = 2.7
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
D G Y+ A N T + + D
Sbjct: 168 NDFGRYNCTATNHIGTRFQEYILALAD 194
>2v9t_A Roundabout homolog 1; structural protein-receptor complex,
developmental protein, domain, roundabout, chemotaxis,
LRR domain; 1.70A {Homo sapiens}
Length = 117
Score = 43.6 bits (103), Expect = 3e-05
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 888 RRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
R++ P E P + V G+ + C A G P P I+W+K G
Sbjct: 4 RQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGE 48
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III
module, beta-sheet sandwich, cell membrane, glycoprotein,
immunoglobulin domain; NMR {Homo sapiens}
Length = 114
Score = 43.3 bits (102), Expect = 3e-05
Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLA 1149
E W+ + + ++ L+ Y +++A N +G+SE P+ + P ++
Sbjct: 51 EDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSE---PTVYEFSMPPKPNIIK 107
Query: 1150 E 1150
+
Sbjct: 108 D 108
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.1.4
Length = 126
Score = 43.8 bits (103), Expect = 3e-05
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEP---KPVIQWFK 929
F EKP V +G+ + E KP I+WFK
Sbjct: 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFK 46
Score = 32.7 bits (74), Expect = 0.25
Identities = 5/31 (16%), Positives = 7/31 (22%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTVHVED 33
G Y S S + V +
Sbjct: 81 KAKDNFAGNYRCEVTYKDKFDSCSFDLEVHE 111
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 46.9 bits (111), Expect = 4e-05
Identities = 29/152 (19%), Positives = 61/152 (40%), Gaps = 10/152 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLV- 243
+ G ++G G G +Y + A K+ K E I L +
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIP 66
Query: 244 RLHDSYETKDSFTIISELAGG--GELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
+ D ++ +L G +L + +R+ S T +A Q+++ ++++H S
Sbjct: 67 NVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLA---DQMINRVEFVHSKS 123
Query: 301 IAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRR 331
H + P + L+ + + + DFGL+++
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155
Score = 37.7 bits (87), Expect = 0.028
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVM-ASVRSVQVKLIDLGCTQRVTKLGTLIH 1006
++ ++++H + H +I+PDN +M R+ QV +ID G ++ T H
Sbjct: 113 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH 164
Score = 32.3 bits (73), Expect = 1.1
Identities = 10/45 (22%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRR 531
Q+++ ++++H S H + P + L+ + + + DFGL+++
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo
sapiens} PDB: 3p40_A*
Length = 404
Score = 46.8 bits (111), Expect = 4e-05
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP++ ++P + + G+ + C A G PKP +QW
Sbjct: 312 APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMV 348
Score = 41.8 bits (98), Expect = 0.001
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
++ V D + ++C A G P P W +
Sbjct: 18 TITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSR 56
Score = 39.9 bits (93), Expect = 0.005
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ + + V+ G L ++C+A G P P I W+K G
Sbjct: 223 MYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKG 260
Score = 37.2 bits (86), Expect = 0.032
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFK 929
+ +E + V G L ++C G P PVI W
Sbjct: 117 LWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMS 153
Score = 32.1 bits (73), Expect = 1.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVE 32
D G Y +A N +I H+++V V+
Sbjct: 285 EDSGEYFCLASNKMGSIRHTISVRVK 310
Score = 30.2 bits (68), Expect = 5.3
Identities = 5/26 (19%), Positives = 8/26 (30%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
+Y N + + V V D
Sbjct: 378 SRAVYQCNTSNEHGYLLANAFVSVLD 403
Score = 29.8 bits (67), Expect = 7.0
Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 8 DEGLYSVIARNIASTI-SHSVTVHV 31
EG Y ARN T S+ + + V
Sbjct: 88 YEGEYQCFARNKFGTALSNRIRLQV 112
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus
gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB:
2om5_A
Length = 382
Score = 46.4 bits (110), Expect = 4e-05
Identities = 13/65 (20%), Positives = 22/65 (33%)
Query: 867 LRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQ 926
+ + + E R + P + G + ++C A G P P I+
Sbjct: 181 IDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIK 240
Query: 927 WFKLG 931
W KL
Sbjct: 241 WRKLD 245
Score = 45.6 bits (108), Expect = 9e-05
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P + + IG L C+A G+P+P ++W + G
Sbjct: 294 QPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDG 332
Score = 42.5 bits (100), Expect = 6e-04
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 892 HAPFFREKP---ITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
+ P F E+P + +K+ + C A P +W GT
Sbjct: 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGT 46
Score = 37.9 bits (88), Expect = 0.018
Identities = 6/37 (16%), Positives = 11/37 (29%), Gaps = 1/37 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFK 929
F E+ + + G + C P +W
Sbjct: 102 EFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLL 138
Score = 32.1 bits (73), Expect = 1.3
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
DEG Y A NI ++ + +
Sbjct: 268 DEGTYECEAENIKGRDTYQGRIIIH 292
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain,
vegfr-2, growth factor receptor, VEGF LI
hormone-signaling protein complex, angiogenesis; 3.20A
{Homo sapiens} PDB: 3v6b_R
Length = 772
Score = 47.1 bits (111), Expect = 4e-05
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 889 RDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ AP IG+ +E+ C A G P P I WFK
Sbjct: 662 LERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDN 704
Score = 45.5 bits (107), Expect = 1e-04
Identities = 9/55 (16%), Positives = 20/55 (36%)
Query: 878 HVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
+ + F + +G+++ + +G P P I+W+K G
Sbjct: 315 TKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGI 369
Score = 42.1 bits (98), Expect = 0.002
Identities = 10/83 (12%), Positives = 24/83 (28%), Gaps = 1/83 (1%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYC 951
+ + + + C A + W+KLG L +PT
Sbjct: 548 TRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLD 607
Query: 952 VTSVLDGLQYLHW-RGLCHLNIE 973
L+ + + + + ++
Sbjct: 608 TLWKLNATMFSNSTNDILIMELK 630
Score = 36.7 bits (84), Expect = 0.066
Identities = 8/38 (21%), Positives = 13/38 (34%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
I + +G+KL + C A E I +
Sbjct: 225 DVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEY 262
Score = 35.5 bits (81), Expect = 0.15
Identities = 12/66 (18%), Positives = 16/66 (24%), Gaps = 4/66 (6%)
Query: 892 HAPFFREKPITIP---VVIGDKLEMKCLAVGEPKP-VIQWFKLGTSTLCYLPIVIPTTHK 947
P EK + P G + C P P I W+ P +
Sbjct: 419 VPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTN 478
Query: 948 DAYCVT 953
C
Sbjct: 479 PYPCEE 484
Score = 34.3 bits (78), Expect = 0.31
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
D+GLY+ A + T +S V V +
Sbjct: 300 SDQGLYTCAASSGLMTKKNSTFVRVHE 326
Score = 33.6 bits (76), Expect = 0.56
Identities = 6/27 (22%), Positives = 8/27 (29%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
LY A N ++ HV
Sbjct: 523 NVSALYKCEAVNKVGRGERVISFHVTR 549
Score = 32.0 bits (72), Expect = 1.4
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNE 35
D G Y+VI N S S V +
Sbjct: 392 DTGNYTVILTNPISKEKQSHVVSLVVYV 419
Score = 31.3 bits (70), Expect = 2.7
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
DEGLY+ A ++ +E
Sbjct: 730 EDEGLYTCQACSVLGCAKVEAFFIIEG 756
Score = 30.9 bits (69), Expect = 3.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNENE 37
D+G Y +A++ + H V + E
Sbjct: 636 DQGDYVCLAQDRKTKKRHCVVRQLTVLERV 665
Score = 30.1 bits (67), Expect = 5.4
Identities = 5/38 (13%), Positives = 11/38 (28%), Gaps = 2/38 (5%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P + + + L++ C G+ W
Sbjct: 30 DLPRLSIQKDILTIKANTTLQITC--RGQRDLDWLWPN 65
Score = 29.3 bits (65), Expect = 9.6
Identities = 4/42 (9%), Positives = 9/42 (21%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
+ + I + + CL V +
Sbjct: 129 VSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRF 170
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY
acidic protein fold, fibronectin type III fold, hormone-
growth factor complex; NMR {Homo sapiens}
Length = 680
Score = 46.5 bits (109), Expect = 5e-05
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 9/94 (9%)
Query: 1054 EPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
+ ++ V Y + + + W T+A D + D++
Sbjct: 182 SSKFNISIEPVIYVVQRRWNYGIHPSE-------DDATHWQTVAQTTDERV-QLTDIRPS 233
Query: 1114 TNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
Y FR++A NV G PS F++ + P
Sbjct: 234 RWYQFRVAAVNVHGTRGFTAPSKHFRS-SKDPSA 266
Score = 34.6 bits (78), Expect = 0.29
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 1101 DHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
DH V +L+ T Y + G I + F+T E P
Sbjct: 592 DHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATIKT--FRTPELPP 634
Score = 31.5 bits (70), Expect = 2.3
Identities = 6/53 (11%), Positives = 15/53 (28%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDV 1159
++ L+ + +Y L A G + E+ + +
Sbjct: 338 LEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGG 390
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding,
disease MU ectodermal dysplasia, glycoprotein,
heparin-binding, immuno domain, kinase; 1.96A {Homo
sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Length = 100
Score = 42.4 bits (100), Expect = 5e-05
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 890 DGHAPFF----REKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ AP++ + + V + ++ +C A G P P ++W K G
Sbjct: 1 NKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNG 46
Score = 32.8 bits (75), Expect = 0.16
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 8 DEGLYSVIARNIASTISHSVTVHV 31
D+G Y+ + N +I+H+ + V
Sbjct: 76 DKGNYTCVVENEYGSINHTYHLDV 99
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM;
2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4
PDB: 1ie5_A
Length = 291
Score = 45.6 bits (108), Expect = 6e-05
Identities = 9/39 (23%), Positives = 12/39 (30%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
F+ P G+ + C V P I W G
Sbjct: 100 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKG 138
Score = 41.0 bits (96), Expect = 0.002
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 893 APFF--REKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
P R+ + +G + + C A G P+P + W K G
Sbjct: 194 PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGE 235
Score = 36.8 bits (85), Expect = 0.037
Identities = 9/43 (20%), Positives = 13/43 (30%), Gaps = 1/43 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPK-PVIQWFKLGTSTL 935
P + +G+ C G+ K I WF L
Sbjct: 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKL 45
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 112
Score = 42.7 bits (101), Expect = 6e-05
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 1092 DWITL-ANNIDHEFWHVKDLKRETNYTFRLSAKNVIGW-SEKGIPSALFKTKE 1142
W+ +NI + V L + Y FR+ AKN G S PS ++
Sbjct: 56 RWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRD 108
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta
trefoil, IG domain, growth factor/growth factor receptor
complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 334
Score = 45.4 bits (107), Expect = 7e-05
Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 854 NKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFF----REKPITIPVVIGD 909
+++R + + + D ++ D AP++ R + V +
Sbjct: 82 LTQRVLCHFSVRV--TDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAAN 139
Query: 910 KLEMKCLAVGEPKPVIQWFKLG 931
+ +C A G P P I W K G
Sbjct: 140 TVRFRCPAAGNPTPSISWLKNG 161
Score = 44.6 bits (105), Expect = 1e-04
Identities = 18/77 (23%), Positives = 25/77 (32%), Gaps = 20/77 (25%)
Query: 854 NKYGAAD-TYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLE 912
NK+G+ TYTL + R P V+G +E
Sbjct: 201 NKFGSIRQTYTLD-------------------VLERSPHRPILQAGLPANQTAVLGSDVE 241
Query: 913 MKCLAVGEPKPVIQWFK 929
C + +P IQW K
Sbjct: 242 FHCKVYSDAQPHIQWLK 258
Score = 40.4 bits (94), Expect = 0.003
Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 889 RDGHAP-FFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFK 929
R P + + GD +E+ C G P W K
Sbjct: 3 RAAEVPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVK 45
Score = 33.1 bits (75), Expect = 0.56
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y+ + N +I + T+ V +
Sbjct: 191 DRGNYTCVVENKFGSIRQTYTLDVLE 216
Score = 29.6 bits (66), Expect = 7.3
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNENE 37
D G Y+ +A N HS + V E E
Sbjct: 302 DAGEYTCLAGNSIGFSHHSAWLVVLPAEEE 331
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 45.4 bits (108), Expect = 8e-05
Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 22/187 (11%)
Query: 156 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAA-K 214
VED++ + + + Y+ LG G G V ++ + G++ A K
Sbjct: 1 VEDDKEGH-LVCRIG--------DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALK 51
Query: 215 VMTGKGNQ-YKSLFKNELDIMNQLCHR------NLVRLHDSYETKDSFTIISELAGGG-- 265
++ + Y+ + E++++ ++ + V + D + I EL G
Sbjct: 52 II--RNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTF 109
Query: 266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD 325
E L Q Y + + H QL L ++H + H L P ++L + L
Sbjct: 110 EFLKENNFQPYPLPH-VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH 168
Query: 326 FGLSRRI 332
+
Sbjct: 169 KSCEEKS 175
Score = 37.7 bits (88), Expect = 0.022
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 25/121 (20%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMAS-----------------VRSVQVKLIDLGCTQR 997
+ L++LH L H +++P+N++ + V++ +++ D G
Sbjct: 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-- 189
Query: 998 VTKLGTLIHP-INTPNPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
T + T PEV+ E DVWS G + + G + F+
Sbjct: 190 -TFDHEHHTTIVAT---RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245
Query: 1056 E 1056
E
Sbjct: 246 E 246
Score = 32.7 bits (75), Expect = 0.78
Identities = 10/51 (19%), Positives = 18/51 (35%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
+ H QL L ++H + H L P ++L + L +
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175
Score = 30.0 bits (68), Expect = 5.4
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1183
PEV+ E DVWS G + + G + F+ E
Sbjct: 207 PPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor
protein tyrosine phosphatase; HET: NAG; 2.00A {Mus
musculus} PDB: 3jxa_A*
Length = 384
Score = 45.6 bits (108), Expect = 9e-05
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P + + I V + + + +C A G PKP +W K
Sbjct: 295 QPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLK 331
Score = 44.8 bits (106), Expect = 2e-04
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 887 SRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ + P T+P G ++++C A+G P P I W +
Sbjct: 199 VMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRAD 243
Score = 42.5 bits (100), Expect = 7e-04
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 891 GHAPFFREKPITIPVVI---GDKLEMKCLAVGEPKPVIQWFKLGT 932
G P F ++P + + K+++ C G PKP I+W GT
Sbjct: 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGT 47
Score = 38.3 bits (89), Expect = 0.014
Identities = 6/37 (16%), Positives = 10/37 (27%), Gaps = 1/37 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFK 929
F T+ V G + + C + W
Sbjct: 103 NFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIF 139
Score = 31.3 bits (71), Expect = 2.2
Identities = 5/25 (20%), Positives = 7/25 (28%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y +A N +
Sbjct: 269 DAGSYECVAENSRGKNVAKGQLTFY 293
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 45.3 bits (108), Expect = 9e-05
Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 36/175 (20%)
Query: 187 FGDELGRGVTGIVYHA-----VERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQL-CH 239
G LGRG G V A + ++ R A K++ G + +EL I+ + H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 240 RNLVRLHDSYETKDS-FTIISELAGGGELLHSL----------------TRQSYYTEYDI 282
N+V L + +I E G L L + + T +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
Y Q+ G++++ H DL L++ + + DFGL+R I
Sbjct: 151 ICYSFQVAKGMEFLASRKCIH-----RDLAARNILLSE--KNVVKICDFGLARDI 198
Score = 30.7 bits (70), Expect = 2.9
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR--YRFEYLF 1199
APE + + ++ Q+DVWS GVL + + S GASP+ G E + ++ R
Sbjct: 218 APETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGTRMR--- 271
Query: 1200 K-ELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
+ T ML + P +RPT E E
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
Score = 29.9 bits (68), Expect = 5.7
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPE 1056
APE + + ++ Q+DVWS GVL + + S GASP+ G E
Sbjct: 218 APETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane,
phosphorylation, immunoglobulin domain, membrane,
glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Length = 192
Score = 44.0 bits (104), Expect = 9e-05
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P + ++ + C A GEP P I W +
Sbjct: 95 QPHIIQLKNET-TYENGQVTLVCDAEGEPIPEITWKRAV 132
Score = 42.1 bits (99), Expect = 3e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 893 APFFR--EKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P +K G+++ C A G P+P I WF+ G
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNG 42
Score = 30.9 bits (70), Expect = 1.6
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y A + S+ + +E
Sbjct: 168 DSGRYDCEAASRIGGHQKSMYLDIE 192
Score = 30.2 bits (68), Expect = 3.7
Identities = 7/24 (29%), Positives = 8/24 (33%)
Query: 8 DEGLYSVIARNIASTISHSVTVHV 31
D G Y A N A + V
Sbjct: 69 DGGPYVCRATNKAGEDEKQAFLQV 92
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 44.9 bits (107), Expect = 9e-05
Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 45/180 (25%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
ELG G G V+ A + A K + + F+ E +++ L H +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL----------------TRQSYYTEYDIAHY 285
+V+ + D ++ E G+L L + + H
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 286 IRQLLSGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
Q+ SG+ Y+ HR DL LV + + DFG+SR + S
Sbjct: 139 ASQIASGMVYLASQHFVHR-----------DLATRNCLVGA--NLLVKIGDFGMSRDVYS 185
Score = 35.3 bits (82), Expect = 0.11
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 21/96 (21%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFE----- 1196
PE + F ++DVWS GV+ + + + G P+ S E + + E
Sbjct: 203 PPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT-QGRVLERPRVC 260
Query: 1197 --YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
++ +ML ++R P +R ++E ++
Sbjct: 261 PKEVYD---------VMLGCWQREPQQRLNIKEIYK 287
Score = 32.2 bits (74), Expect = 0.95
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
PE + F ++DVWS GV+ + + + G P+ S E + +
Sbjct: 203 PPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 248
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A
{Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4
b.1.1.4
Length = 395
Score = 45.3 bits (107), Expect = 1e-04
Identities = 8/40 (20%), Positives = 13/40 (32%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P + + GD + C+ P +FK G
Sbjct: 211 GEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNG 250
Score = 44.5 bits (105), Expect = 2e-04
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 893 APFFREKPI-TIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
AP + +KP I V G + + C G P P + W
Sbjct: 308 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH 345
Score = 41.0 bits (96), Expect = 0.002
Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGT 932
P +++P + + ++C+ G + V W K G
Sbjct: 6 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGK 46
Score = 37.2 bits (86), Expect = 0.034
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKC-LAVGEPKPVIQWFKLGTS 933
K + G ++ C L PKP+I W K +
Sbjct: 101 IASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSG 141
Score = 29.1 bits (65), Expect = 9.4
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 8 DEGLYSVIARNIA-STISHSVTVHVE 32
DEG+Y+ N HS+ + V
Sbjct: 281 DEGVYTCEVDNGVGKPQKHSLKLTVV 306
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion,
membrane, development protein; HET: NAG; 1.95A
{Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Length = 388
Score = 45.3 bits (107), Expect = 1e-04
Identities = 9/37 (24%), Positives = 11/37 (29%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ P T V G C G P + W K
Sbjct: 307 PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMK 343
Score = 41.1 bits (96), Expect = 0.002
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 893 APFFREKPI-TIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P F ++P I E++C A G P P I W +
Sbjct: 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSD 42
Score = 40.7 bits (95), Expect = 0.002
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P +KP+ +++ + + C A G P P +W+K
Sbjct: 213 RTPALVQKPLE--LMVAHTISLLCPAQGFPAPSFRWYKFI 250
Score = 36.8 bits (85), Expect = 0.044
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLA---VGEPKPVIQWFKLG 931
A ++ V+ G+ +KCL V + V+ W
Sbjct: 103 AQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDE 144
Score = 31.1 bits (70), Expect = 2.5
Identities = 6/25 (24%), Positives = 8/25 (32%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y + N S + V
Sbjct: 281 DSGKYLCVVNNSVGGESVETVLTVT 305
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma,
epidermolysis bullosa, alternative splicing, disease
mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo
sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Length = 234
Score = 44.4 bits (105), Expect = 1e-04
Identities = 15/78 (19%), Positives = 29/78 (37%)
Query: 1093 WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEP 1152
L +N + +++L+ Y + + A+N GW + T+ + P + P
Sbjct: 150 KKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIP 209
Query: 1153 IFPQTDVWSAGVLAYVLL 1170
P D S L+
Sbjct: 210 DIPIVDAQSGEDYDSFLM 227
Score = 32.1 bits (73), Expect = 0.96
Identities = 6/40 (15%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
+ +L +Y ++ A G +T ++ P
Sbjct: 62 LTNLYPYCDYEMKVCAYGAQGEGPYS-SLVSCRTHQEVPS 100
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding;
2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
PDB: 2ibb_A
Length = 214
Score = 44.0 bits (104), Expect = 1e-04
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWS 1161
V DLK + Y FR+ A +++ SA F + A P + + +S
Sbjct: 74 VTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYS 128
Score = 32.5 bits (74), Expect = 0.57
Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 1092 DWITLAN-NIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
++ + + L+ T Y F+L + + SE SAL + + Q P
Sbjct: 162 EYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASE---FSALKQGRTQRP 213
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 45.0 bits (107), Expect = 1e-04
Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 13/162 (8%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAA-KVMTGKGNQ-YKSLFKNELDIMNQLC 238
++ Y+ D LG G G V ++ +G + A K++ K Y ++E+ ++ L
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV--KNVDRYCEAARSEIQVLEHLN 69
Query: 239 HR------NLVRLHDSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLL 290
V++ + +E I+ EL G + + + I Q+
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKE-NGFLPFRLDHIRKMAYQIC 128
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
++++H + H L P ++L R
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Score = 34.9 bits (81), Expect = 0.15
Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 43/130 (33%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMAS-----------------VRSVQVKLIDLGCT-- 995
+ + +LH L H +++P+N++ + + +K++D G
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY 186
Query: 996 --QRVTKLGTLI---HPINTPNPEFAAPEVLAE----EPIFPQTDVWSAGVLAYVLLSGA 1046
+ + TL+ H + APEV+ +P DVWS G + G
Sbjct: 187 DDEHHS---TLVSTRH--------YRAPEVILALGWSQPC----DVWSIGCILIEYYLGF 231
Query: 1047 SPFRGQSEPE 1056
+ F E
Sbjct: 232 TVFPTHDSKE 241
Score = 33.0 bits (76), Expect = 0.54
Identities = 8/51 (15%), Positives = 16/51 (31%)
Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
I Q+ ++++H + H L P ++L R
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer
suppressor, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 116
Score = 42.0 bits (99), Expect = 1e-04
Identities = 10/55 (18%), Positives = 21/55 (38%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
T+ + ++ ++ L+ ++Y L A N G SA ++ P
Sbjct: 60 YAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITSGPS 114
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif,
immunoglobulin-like domain, growth facto factor
receptor, extracellular; 2.10A {Homo sapiens} PDB:
1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E
1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Length = 231
Score = 44.1 bits (104), Expect = 1e-04
Identities = 13/79 (16%), Positives = 19/79 (24%)
Query: 885 IESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPT 944
+ R P V+G +E C + +P IQW K
Sbjct: 110 VVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLP 169
Query: 945 THKDAYCVTSVLDGLQYLH 963
K + L
Sbjct: 170 YLKVLKHSGINSSNAEVLA 188
Score = 43.7 bits (103), Expect = 1e-04
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 886 ESRRDGHAPFF----REKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
E+ + AP++ + + V + ++ +C A G P P ++W K G
Sbjct: 8 ENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNG 57
Score = 31.4 bits (71), Expect = 1.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D+G Y+ + N +I+H+ + V +
Sbjct: 87 DKGNYTCVVENEYGSINHTYHLDVVE 112
Score = 29.5 bits (66), Expect = 7.0
Identities = 6/26 (23%), Positives = 8/26 (30%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y N + S + V
Sbjct: 196 DAGEYICKVSNYIGQANQSAWLTVLP 221
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 44.5 bits (106), Expect = 1e-04
Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 46/179 (25%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVM-TGKGNQYKSLFKNELDIMNQLCHR 240
F +ELG G VY A K + + F++E + +L H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL----------------TRQSYYTEYDIAH 284
N+V L ++I G+L L T +S D H
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 285 YIRQLLSGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
+ Q+ +G++Y+ H+ DL LV ++ ++D GL R +
Sbjct: 133 LVAQIAAGMEYLSSHHVVHK-----------DLATRNVLVYD--KLNVKISDLGLFREV 178
Score = 32.6 bits (75), Expect = 0.79
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 21/96 (21%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFE----- 1196
APE + F +D+WS GV+ + + S G P+ G S + + + R
Sbjct: 198 APEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR-NRQVLPCPDDC 255
Query: 1197 --YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
+++ LM+ + P +RP ++ H
Sbjct: 256 PAWVYA---------LMIECWNEFPSRRPRFKDIHS 282
Score = 29.1 bits (66), Expect = 9.9
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
APE + F +D+WS GV+ + + S G P+ G S + + +
Sbjct: 198 APEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 44.5 bits (106), Expect = 1e-04
Identities = 40/181 (22%), Positives = 65/181 (35%), Gaps = 42/181 (23%)
Query: 187 FGDELGRGVTGIVYHA-VERSSGRNYAAKV---MTGKG--NQYKSLFKNELDIMNQLCHR 240
G LG G G V A GR V M + +E +++ Q+ H
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL------------------------TRQSY 276
++++L+ + +I E A G L L +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 277 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRR 331
T D+ + Q+ G+ Y+ + + H DL LVA GR + ++DFGLSR
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVH-----RDLAARNILVAE--GRKMKISDFGLSRD 199
Query: 332 I 332
+
Sbjct: 200 V 200
Score = 30.7 bits (70), Expect = 3.1
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 25/98 (25%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR--YRFE--- 1196
A E L + I+ Q+DVWS GVL + +++ G +P+ G N ++ +R E
Sbjct: 220 AIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL---FNLLKTGHRMERPD 275
Query: 1197 ----YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
+++ LML +K+ P KRP + +
Sbjct: 276 NCSEEMYR---------LMLQCWKQEPDKRPVFADISK 304
Score = 30.3 bits (69), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
A E L + I+ Q+DVWS GVL + +++ G +P+ G +
Sbjct: 220 AIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL 265
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin
superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus
norvegicus}
Length = 403
Score = 44.8 bits (106), Expect = 1e-04
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P+F P + +E +C G+P P + W K
Sbjct: 312 PPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMK 348
Score = 44.4 bits (105), Expect = 2e-04
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+F ++P + + G ++C G P P W +
Sbjct: 221 QLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGE 259
Score = 44.1 bits (104), Expect = 2e-04
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
F + +I +GD + +KC +G+P P I W K
Sbjct: 121 PLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQK 157
Score = 41.7 bits (98), Expect = 0.001
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGE-PKPVIQWFKLGT 932
+ F +P + G + + C A + PVI+W K G
Sbjct: 21 SLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGL 61
Score = 29.8 bits (67), Expect = 6.2
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 8 DEGLYSVIARNIASTISHSVTVHV 31
D G Y+ + IS S + V
Sbjct: 286 DSGTYTCVVTYKNENISASAELTV 309
Score = 29.4 bits (66), Expect = 8.5
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
DEG Y +A N A S + V
Sbjct: 376 DEGFYQCVAENEAGNAQSSAQLIVPK 401
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 44.5 bits (105), Expect = 2e-04
Identities = 25/119 (21%), Positives = 37/119 (31%), Gaps = 9/119 (7%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK------GNQYKSLFKNELDIMNQL-CH 239
G LGRG G V A + + + K + +EL I+ + H
Sbjct: 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 240 RNLVRLH-DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
N+V L + +I E G L L R + G DY+
Sbjct: 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKTKGARFRQGKDYVG 143
Score = 34.9 bits (80), Expect = 0.16
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
V G+++L R H ++ N++++ V K+ D G + + K + + P
Sbjct: 202 VAKGMEFLASRKCIHRDLAARNILLSEKNVV--KICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 1014 EFAAPEVLAEEPIFP-QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRY 1066
++ APE + + ++ Q+DVWS GVL + + S GASP+ P + + F R
Sbjct: 260 KWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPY-----PGVKIDEEFCRR 308
Score = 33.0 bits (75), Expect = 0.68
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Query: 1144 APEVLAEEPIFP-QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR--YRFE--- 1196
APE + + ++ Q+DVWS GVL + + S GASP+ G E + ++ R
Sbjct: 263 APETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGTRMRAPD 319
Query: 1197 YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
Y E+ Q ML + P +RPT E E
Sbjct: 320 YTTPEMYQ-----TMLDCWHGEPSQRPTFSELVE 348
Score = 29.9 bits (67), Expect = 5.6
Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 5/130 (3%)
Query: 405 YTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVP--NRGPDVKTWEDNVPNRG 462
Y R + P K V D+K D++ E+ +
Sbjct: 117 YLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV 176
Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
E L + T + Y Q+ G++++ H L ++L++ +
Sbjct: 177 EEEEAPEDLYKDFL-TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVK 233
Query: 523 LTDFGLSRRI 532
+ DFGL+R I
Sbjct: 234 ICDFGLARDI 243
Score = 29.1 bits (65), Expect = 9.2
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
T + Y Q+ G++++ H L ++L++ + + DFGL+R I
Sbjct: 191 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDI 243
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 44.2 bits (105), Expect = 2e-04
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 42/181 (23%)
Query: 187 FGDELGRGVTGIVYHA-----VERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQL-CH 239
FG LG G G V +A + A K++ + + +EL +M QL H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSL-----------------------TRQSY 276
N+V L + +I E G+LL+ L +
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 277 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRR 331
T D+ + Q+ G++++ S H DL LV H G+ + + DFGL+R
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVH-----RDLAARNVLVTH--GKVVKICDFGLARD 221
Query: 332 I 332
I
Sbjct: 222 I 222
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-
like; 2.50A {Homo sapiens}
Length = 312
Score = 43.8 bits (103), Expect = 2e-04
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
G PF +E + + L +C PK W K
Sbjct: 1 GIDPFTKEVVVNVDDDGVISLNFEC-DKMTPKSEFSWSK 38
Score = 36.5 bits (84), Expect = 0.048
Identities = 16/114 (14%), Positives = 34/114 (29%), Gaps = 27/114 (23%)
Query: 842 DEEIDDERRNRINKYGAADTYTLR--------------RLRHEIGT-----------RPE 876
++EI + + +++ + +L+ T +
Sbjct: 146 EKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKK 205
Query: 877 AHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFK 929
EA+ + P F E ++ V + +KC K I W+K
Sbjct: 206 LQKEAEFQRQEWIRKQGPHFVE-YLSWEVTGECNVLLKCKVANIKKETHIVWYK 258
Score = 31.5 bits (71), Expect = 2.0
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G+Y VI ++ + + E
Sbjct: 287 DAGIYEVILKDDRGKDKSRLKLVDE 311
Score = 31.1 bits (70), Expect = 2.0
Identities = 2/44 (4%), Positives = 9/44 (20%), Gaps = 1/44 (2%)
Query: 887 SRRDGHAPFFREKPITIPVVI-GDKLEMKCLAVGEPKPVIQWFK 929
S + + + ++ G + +
Sbjct: 101 SHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIF 144
Score = 31.1 bits (70), Expect = 2.5
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
DEG Y+ ++ +T +V + +
Sbjct: 177 DEGTYTFQLQDGKATNHSTVVLVGDV 202
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 99
Score = 40.8 bits (96), Expect = 2e-04
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
G + + + V GD L+++C + I W +
Sbjct: 1 GSSGSSGVEVESFLVHPGDLLQLRCRLRDDV-QSINWLR 38
Score = 33.5 bits (77), Expect = 0.067
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D GLY+ + + + + + +V+V D
Sbjct: 65 DSGLYACVTSSPSGSDTTYFSVNVSD 90
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical
bundle cytokine, CY receptor complex, extracellular
complex; HET: NAG; 4.30A {Homo sapiens}
Length = 423
Score = 43.9 bits (103), Expect = 3e-04
Identities = 6/83 (7%), Positives = 21/83 (25%), Gaps = 11/83 (13%)
Query: 851 NRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDK 910
++ N + + + E+ + + + + V +
Sbjct: 17 HKNNDSSVGKSSSYPMV-----------SESPEDLGCALRPQSSGTVYEAAAVEVDVSAS 65
Query: 911 LEMKCLAVGEPKPVIQWFKLGTS 933
+ ++ L W +S
Sbjct: 66 ITLQVLVDAPGNISCLWVFKHSS 88
Score = 40.0 bits (93), Expect = 0.004
Identities = 6/41 (14%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLGT 932
+ + + +G+ L ++C AV + W
Sbjct: 227 NQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENK 267
Score = 37.3 bits (86), Expect = 0.031
Identities = 3/42 (7%), Positives = 7/42 (16%), Gaps = 2/42 (4%)
Query: 892 HAPFFR--EKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
F + ++ P+ W
Sbjct: 323 EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSR 364
Score = 36.2 bits (83), Expect = 0.079
Identities = 4/39 (10%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ + + ++ + C++ P+P+++W
Sbjct: 140 TLLYTLRRPYF-RKMENQDALVCISESVPEPIVEWVLCD 177
Score = 32.0 bits (72), Expect = 1.5
Identities = 5/26 (19%), Positives = 10/26 (38%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
G Y A N + + T+++
Sbjct: 389 QPGEYIFHAENDDAQFTKMFTLNIRS 414
Score = 30.8 bits (69), Expect = 3.4
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
G Y + ++ A+ + TV + +
Sbjct: 113 TQAGEYLLFIQSEATNYTILFTVSIRN 139
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI,
thick filament, immunoglobulin domain; NMR {Homo
sapiens} SCOP: b.1.1.4
Length = 139
Score = 41.7 bits (97), Expect = 3e-04
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS 933
H P TI VV G+KL + G+P P + W K T
Sbjct: 17 HLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQ 58
Score = 34.0 bits (77), Expect = 0.11
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
DEG+Y+V +N ++TV V D
Sbjct: 114 DEGVYTVTVKNPVGEDQVNLTVKVID 139
>1f97_A Junction adhesion molecule; immunoglobulin superfamily,
beta-sandwich fold, cell adhesion; 2.50A {Mus musculus}
SCOP: b.1.1.1 b.1.1.4
Length = 212
Score = 42.6 bits (100), Expect = 3e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLGT 932
P + V IG++ + C G P WFK G
Sbjct: 104 PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGI 144
Score = 41.1 bits (96), Expect = 0.001
Identities = 5/38 (13%), Positives = 13/38 (34%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ V + +++ C G P ++W +
Sbjct: 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQ 39
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states,
actin-binding, cardiomyopathy, cell adhesion, disease
mutation, immunoglobulin domain; 1.30A {Homo sapiens}
PDB: 2v6h_A 2avg_A
Length = 108
Score = 40.4 bits (94), Expect = 3e-04
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEP---KPVIQWFK 929
F +P V +G + G PV++WFK
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFK 43
Score = 29.2 bits (65), Expect = 2.6
Identities = 3/26 (11%), Positives = 6/26 (23%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
G Y + + V +
Sbjct: 83 FTGSYRCEVSTKDKFDCSNFNLTVHE 108
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor,
tight junction formation, immunoglobulin superfamily,
immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1
b.1.1.4 PDB: 3eoy_G
Length = 209
Score = 42.6 bits (100), Expect = 3e-04
Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLG 931
P I IG++ + C G P WFK G
Sbjct: 107 PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDG 146
Score = 39.6 bits (92), Expect = 0.003
Identities = 4/39 (10%), Positives = 13/39 (33%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ + + + +++ C G P ++W
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQ 42
Score = 30.7 bits (69), Expect = 2.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNE 35
D G YS ARN T S V +E E
Sbjct: 182 DTGEYSCEARNGYGTPMTSNAVRMEAVE 209
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 43.3 bits (103), Expect = 3e-04
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC 238
+ T+ +D +G GV G VY V G A K T + +Q F+ E++ ++
Sbjct: 35 EEATNNFDHKFLIGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 239 HRNLVRL 245
H +LV L
Sbjct: 94 HPHLVSL 100
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling
protein/receptor, growth regulation/complex, vitamin
K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Length = 195
Score = 42.2 bits (99), Expect = 3e-04
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFK 929
P+F E+P V + C A G P+PV + W +
Sbjct: 106 LPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQ 143
Score = 39.1 bits (91), Expect = 0.004
Identities = 13/81 (16%), Positives = 19/81 (23%), Gaps = 11/81 (13%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLA-VGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCV 952
F P I G ++C V P + W + G ++ V
Sbjct: 3 SPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQ--------ILELADSTQTQV 54
Query: 953 TSVLDGLQYLHWRGLCHLNIE 973
D L I
Sbjct: 55 PLGEDEQDDWIVVS--QLRIT 73
Score = 29.5 bits (66), Expect = 4.8
Identities = 7/26 (26%), Positives = 10/26 (38%), Gaps = 1/26 (3%)
Query: 8 DEGLYSVIARNIA-STISHSVTVHVE 32
+S A N T S + T+ V
Sbjct: 167 KTSSFSCEAHNAKGVTTSRTATITVL 192
Score = 28.7 bits (64), Expect = 9.9
Identities = 6/26 (23%), Positives = 10/26 (38%), Gaps = 1/26 (3%)
Query: 8 DEGLYSVIARNIA-STISHSVTVHVE 32
D G Y + + +S V +E
Sbjct: 79 DTGQYQCLVFLGHQTFVSQPGYVGLE 104
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein
complex, growth factor-receptor complex, TRA hormone
complex; HET: NDG NAG; 2.30A {Homo sapiens}
Length = 289
Score = 43.2 bits (101), Expect = 4e-04
Identities = 13/79 (16%), Positives = 27/79 (34%)
Query: 878 HVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCY 937
V++DA R + + V G+ + + C+ +G +W +
Sbjct: 166 EVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRL 225
Query: 938 LPIVIPTTHKDAYCVTSVL 956
+ V Y + S+L
Sbjct: 226 VEPVTDFLLDMPYHIRSIL 244
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical
bundle cytokine, hematopoietic cytokine-receptor
complex, cell surface, EXTR complex; 7.80A {Homo
sapiens}
Length = 527
Score = 43.5 bits (102), Expect = 4e-04
Identities = 5/55 (9%), Positives = 15/55 (27%)
Query: 879 VEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS 933
E+ + + + + V + + ++ L W +S
Sbjct: 34 SESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSS 88
Score = 39.7 bits (92), Expect = 0.006
Identities = 3/40 (7%), Positives = 7/40 (17%), Gaps = 2/40 (5%)
Query: 894 PFFREKPI--TIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
F + ++ P+ W
Sbjct: 325 GFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSR 364
Score = 35.4 bits (81), Expect = 0.13
Identities = 4/39 (10%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
+ + + ++ + C++ P+P+++W
Sbjct: 140 TLLYTLRRPYF-RKMENQDALVCISESVPEPIVEWVLCD 177
Score = 33.5 bits (76), Expect = 0.50
Identities = 9/39 (23%), Positives = 12/39 (30%), Gaps = 1/39 (2%)
Query: 905 VVIGDKLEMKCLAVGEPKPVIQWFKL-GTSTLCYLPIVI 942
+ + C + G P P W K S C I
Sbjct: 419 LAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITE 457
Score = 32.0 bits (72), Expect = 1.6
Identities = 6/40 (15%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVG-EPKPVIQWFKLGT 932
+ + + +G+ L ++C AV + W
Sbjct: 228 QTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENK 267
Score = 31.2 bits (70), Expect = 2.8
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 8 DEGLYSVIARNIASTISHSVTVHV 31
G Y A N + + T+++
Sbjct: 389 QPGEYIFHAENDDAQFTKMFTLNI 412
Score = 29.7 bits (66), Expect = 8.0
Identities = 4/26 (15%), Positives = 8/26 (30%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVE 32
L A N T ++ ++
Sbjct: 484 IKGFLVKCCAYNSLGTSCETILLNSP 509
Score = 29.7 bits (66), Expect = 8.2
Identities = 5/26 (19%), Positives = 12/26 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
G Y + ++ A+ + TV + +
Sbjct: 114 QAGEYLLFIQSEATNYTILFTVSIRN 139
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane,
glycoprotein, signal, complex (immunoglobulin/receptor);
2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB:
1ira_Y* 4dep_B* 1g0y_R
Length = 315
Score = 42.8 bits (100), Expect = 5e-04
Identities = 14/104 (13%), Positives = 29/104 (27%), Gaps = 8/104 (7%)
Query: 872 GTRPEAHVEADALIESRRDGHAP-FFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKL 930
G + + + P T+ V +G ++++ C G+ + W
Sbjct: 187 GKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 246
Query: 931 GTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEP 974
G+ + SV + + LNI
Sbjct: 247 GSV-------IDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 283
Score = 33.2 bits (75), Expect = 0.47
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPIT 57
D G Y + RN + + ++ +NE Y A +Q
Sbjct: 73 DSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGG 122
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 42.2 bits (100), Expect = 7e-04
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHR 240
+D + + LGRG G VY + G A K + + Q + F+ E+++++ HR
Sbjct: 29 SDNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 87
Query: 241 NLVRLH 246
NL+RL
Sbjct: 88 NLLRLR 93
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3,
immunoglobulin-like beta- sandwich fold, KIAA0970,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 106
Score = 39.6 bits (93), Expect = 7e-04
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+K L T Y R+ A +V+G T +
Sbjct: 65 IKGLSPATTYYCRVQALSVVGAGPFS-EVVACVTPPSSG 102
>2ch8_A BARF1, P33, 33 kDa early protein; viral protein, immunoglobulin
domain, oncogene; HET: NAG MAN; 2.3A {Epstein-barr
virus}
Length = 201
Score = 41.2 bits (96), Expect = 8e-04
Identities = 14/94 (14%), Positives = 26/94 (27%), Gaps = 12/94 (12%)
Query: 845 IDDERRNRINKYGAADTYTLR----RLRHE-----IGTRPEAHVEADALIESRRDGHAPF 895
I+ R + + +A+T+ L + H+ E V + +
Sbjct: 50 IEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVK---PLT 106
Query: 896 FREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
L + C P P +QW
Sbjct: 107 LSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLM 140
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 41.9 bits (99), Expect = 0.001
Identities = 35/195 (17%), Positives = 59/195 (30%), Gaps = 70/195 (35%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY---KSL-----------FKNELD 232
+ ++G G G V+ A A ++ + K L F+ E
Sbjct: 51 YVRDIGEGAFGRVFQAR--------APGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 233 IMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL--------------------- 271
+M + + N+V+L ++ E G+L L
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 272 ---TRQSYYTEYDIAHYIRQLLSGLDYM------HRLSIAHLGLTPGDL-----LVAHPG 317
+ + RQ+ +G+ Y+ HR DL LV
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR-----------DLATRNCLVGE-- 209
Query: 318 GRHLLLTDFGLSRRI 332
+ + DFGLSR I
Sbjct: 210 NMVVKIADFGLSRNI 224
Score = 32.3 bits (74), Expect = 0.96
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 25/98 (25%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR--YRFE--- 1196
PE + + ++DVW+ GV+ + + S G P+ G + E + +VR
Sbjct: 244 PPESIFYN-RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV---IYYVRDGNILACPE 299
Query: 1197 ----YLFKELTQEATRFLMLI-FKRAPGKRPTVEECHE 1229
L+ LM + + + P RP+ H
Sbjct: 300 NCPLELYN---------LMRLCWSKLPADRPSFCSIHR 328
Score = 31.1 bits (71), Expect = 2.7
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 1017 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
PE + + ++DVW+ GV+ + + S G P+ G + E V
Sbjct: 244 PPESIFYN-RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV 289
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 126
Score = 39.7 bits (93), Expect = 0.001
Identities = 10/54 (18%), Positives = 22/54 (40%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
T+ + ++ +++L ++Y L A N +G SA+ + P
Sbjct: 70 HAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTSGP 123
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 42.1 bits (99), Expect = 0.001
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH 1006
LD L+Y+H H +I+ N+++ QV L+D G R G
Sbjct: 162 LDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKA 212
Score = 37.8 bits (88), Expect = 0.020
Identities = 36/186 (19%), Positives = 57/186 (30%), Gaps = 32/186 (17%)
Query: 185 YDFGDELGRGVTGIVYHAVERSS-----GRNYAAKVMTGKGNQ-------YKSLFKNELD 232
+ G +G+G G +Y A SS KV Y+ K E
Sbjct: 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQI 96
Query: 233 IMNQLCHRNLVR---------LHDSYETKDSFTIISELAGGGELLHSLTRQ-----SYYT 278
+ LHD F I+ G L + S T
Sbjct: 97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF---GSDLQKIYEANAKRFSRKT 153
Query: 279 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
++ ++L L+Y+H H + +LL+ + + L D+GL+ R G
Sbjct: 154 VLQLS---LRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH 210
Query: 339 NPLEYD 344
D
Sbjct: 211 KAYAAD 216
Score = 37.1 bits (86), Expect = 0.036
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNG 546
++L L+Y+H H + +LL+ + + L D+GL+ R G
Sbjct: 160 RILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPK 218
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core
protein; immunoglobulin-like domain, extracellular
matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Length = 98
Score = 38.6 bits (90), Expect = 0.001
Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLGTSTL 935
E+ + V G + C A P + W +L L
Sbjct: 10 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKL 53
Score = 32.5 bits (74), Expect = 0.19
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
D G Y N+ + + T+HV+
Sbjct: 73 DAGTYVCTGSNMFAMDQGTATLHVQ 97
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural
protein; 1.65A {Homo sapiens}
Length = 197
Score = 40.8 bits (96), Expect = 0.001
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
+ T+A N W V L+ +Y FR+ A+N G P+ + P
Sbjct: 51 AYSTVATNCHKTSWKVDQLQEGCSYYFRVLAENEYGIGL---PAETAESVKASERP 103
Score = 38.9 bits (91), Expect = 0.005
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKE 1142
W T + + L + Y+FR+SA+N G S+ S K+
Sbjct: 148 KWAT-CATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIAKD 197
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9,
KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 110
Score = 38.6 bits (90), Expect = 0.001
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
V L + Y R+ A N G S S + +T E +
Sbjct: 69 VDGLHFNSTYNARVKAFNKTGVSP---YSKTLVLQTSEGSG 106
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 120
Score = 38.9 bits (91), Expect = 0.001
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
+++L T Y FR+ A+N G E SA +T+ ++
Sbjct: 79 IQNLMPATVYIFRVMAQNKHGSGE---SSAPLRVETQPESG 116
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3;
immunoglobulin, VCBP, V-type, V SET, immune system;
1.85A {Branchiostoma floridae}
Length = 250
Score = 41.1 bits (95), Expect = 0.001
Identities = 10/74 (13%), Positives = 20/74 (27%)
Query: 861 TYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGE 920
Y + + I T ++ L + + V G+ + M C
Sbjct: 104 RYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDC 163
Query: 921 PKPVIQWFKLGTST 934
+ W+ T
Sbjct: 164 ANANVTWYTGPTFF 177
Score = 29.5 bits (65), Expect = 7.0
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 5/37 (13%)
Query: 898 EKPITIPVVIGDKLEMKC---LAVGEPKPVIQWFKLG 931
+ V G +E+ C LA PVI W K
Sbjct: 9 HTEVE--VHAGGTVELPCSYQLANDTQPPVISWLKGA 43
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 118
Score = 38.9 bits (91), Expect = 0.002
Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 1092 DWITL-ANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ L N V+DL +Y FR+ A++ GW + +++ P
Sbjct: 61 ELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVSGP 115
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1,
midin-2, ring finger protein 60, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 127
Score = 38.7 bits (90), Expect = 0.002
Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSAL-FKTKEQAPE 1146
VD + NI + V L+ T Y F + A N G KT Q +
Sbjct: 67 SVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRN---SEPTRLKTNSQPFK 121
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C,
C-protein, skeletal muscle fast-isoform, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 38.5 bits (90), Expect = 0.002
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 902 TIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
T +G++L + G+P+P + W K G
Sbjct: 33 TYIRKVGEQLNLVVPFQGKPRPQVVWTKGG 62
Score = 33.1 bits (76), Expect = 0.16
Identities = 4/26 (15%), Positives = 11/26 (42%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G Y + + + ++ + V +
Sbjct: 90 DSGEYELSVQIENMKDTATIRIRVVE 115
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor;
2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A
1lwr_A
Length = 209
Score = 40.2 bits (94), Expect = 0.002
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ LK ET Y RL+A N G E S FKT+
Sbjct: 72 IVGLKPETTYAVRLAALNGKGLGEISAASE-FKTQPVRE 109
Score = 37.5 bits (87), Expect = 0.017
Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 1092 DWITLANN-IDHEFWHVKDLKRETNYTFRLSAKNVIGWSE 1130
+W + +K L Y + A+N G S+
Sbjct: 153 EWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSK 192
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 40.9 bits (96), Expect = 0.002
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 956 LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH 1006
LD L++LH H N+ +N+ + QV L G R G +
Sbjct: 169 LDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVA 219
Score = 37.0 bits (86), Expect = 0.033
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
+LL L+++H H +T ++ V + L +G + R
Sbjct: 167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFR 210
Score = 37.0 bits (86), Expect = 0.033
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 531
+LL L+++H H +T ++ V + L +G + R
Sbjct: 167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFR 210
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker,
immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Length = 642
Score = 41.1 bits (96), Expect = 0.003
Identities = 10/39 (25%), Positives = 13/39 (33%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
P+ G+ L + C A P WF GT
Sbjct: 204 DAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGT 242
Score = 38.8 bits (90), Expect = 0.014
Identities = 7/36 (19%), Positives = 8/36 (22%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P G L + C A P W
Sbjct: 382 DDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLI 417
Score = 38.4 bits (89), Expect = 0.016
Identities = 7/36 (19%), Positives = 10/36 (27%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P + G L + C + P P W
Sbjct: 560 DTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRI 595
Score = 37.2 bits (86), Expect = 0.040
Identities = 5/36 (13%), Positives = 9/36 (25%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ PV D + C + + W
Sbjct: 468 KPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVN 503
Score = 34.9 bits (80), Expect = 0.20
Identities = 6/40 (15%), Positives = 10/40 (25%), Gaps = 1/40 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS 933
+ PV D + C + W+ S
Sbjct: 112 KPSISSNNSKPVEDKDAVAFTCEPETQD-ATYLWWVNNQS 150
Score = 31.8 bits (72), Expect = 1.7
Identities = 4/34 (11%), Positives = 11/34 (32%)
Query: 896 FREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ V G ++ + + + W+K
Sbjct: 2 LTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYK 35
Score = 31.5 bits (71), Expect = 2.4
Identities = 6/37 (16%), Positives = 11/37 (29%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
F + PV D + + C + + W
Sbjct: 289 PKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVN 325
Score = 30.3 bits (68), Expect = 5.4
Identities = 5/25 (20%), Positives = 13/25 (52%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHV 31
+ G Y+ N+A+ ++S+ +
Sbjct: 614 NNNGTYACFVSNLATGRNNSIVKSI 638
Score = 29.5 bits (66), Expect = 8.5
Identities = 4/25 (16%), Positives = 11/25 (44%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
+ G Y+ A N + ++ + +
Sbjct: 259 NSGSYTCQAHNSDTGLNRTTVTTIT 283
Score = 29.5 bits (66), Expect = 9.8
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
+ GLY+ A N AS S + +
Sbjct: 437 NSGLYTCQANNSASGHSRTTVKTIT 461
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone
receptor/immune system complex; 3.80A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1
PDB: 3loh_E
Length = 897
Score = 41.1 bits (95), Expect = 0.003
Identities = 27/198 (13%), Positives = 54/198 (27%), Gaps = 26/198 (13%)
Query: 955 VLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
+ G + H+ LC I V + + I L + +
Sbjct: 421 ITQGKLFFHYNPKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIRT 480
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
F + E P +L ++L +P++ +E + + + +
Sbjct: 481 SFDKILLRWEPYWPPD----FRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDP 536
Query: 1074 ELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEK-- 1131
L + +H W ++ LK T Y + +
Sbjct: 537 PL-----------------RSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTY 579
Query: 1132 GIPSAL--FKTKEQAPEV 1147
G S + +T P V
Sbjct: 580 GAKSDIIYVQTDATNPSV 597
Score = 34.5 bits (78), Expect = 0.28
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 1089 HEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
+ + ++ E + L+ T Y L A N E+ +A +T +A
Sbjct: 733 NNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAK 791
Score = 31.0 bits (69), Expect = 3.5
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIG---WSEK 1131
T + ++ L NY+ R+ A ++ G W+E
Sbjct: 838 LHLCDTRKHFALERGCRLRGLS-PGNYSVRIRATSLAGNGSWTEP 881
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex,
beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo
sapiens}
Length = 339
Score = 40.4 bits (94), Expect = 0.003
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Query: 872 GTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKC---LAVGEPKPVIQWF 928
G + + I+ +++ P TI +G +L + C L G P + W+
Sbjct: 205 GQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWW 264
Query: 929 KLG 931
Sbjct: 265 TAN 267
Score = 36.2 bits (83), Expect = 0.056
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 7/49 (14%)
Query: 893 APFFREKPITIPVVIGDKLEMKC-------LAVGEPKPVIQWFKLGTST 934
F + G+ + ++C A P+ + W K ++
Sbjct: 18 CRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSAR 66
Score = 32.7 bits (74), Expect = 0.84
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNE 35
D G Y RN + S+ + V +N
Sbjct: 92 DSGTYVCTTRNASYCDKMSIELRVFENT 119
Score = 32.0 bits (72), Expect = 1.3
Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 4/57 (7%)
Query: 876 EAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLE---MKCLAVGEPKPVIQWFK 929
+ + + D PF P + + L + + IQW+K
Sbjct: 106 CDKMSIELRVFENTDAFLPFIS-YPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYK 161
>2crm_A Fibronectin type-III domain containing protein 3A; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 120
Score = 37.8 bits (88), Expect = 0.003
Identities = 10/55 (18%), Positives = 16/55 (29%), Gaps = 6/55 (10%)
Query: 1093 WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
W + + E L Y R+ + G S S L +T +
Sbjct: 66 WEMIYSGATREH-LCDRLNPGCFYRLRVYCISDGGQSA---VSESLLVQTPAVSG 116
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell
adhesion molecule, immunoglobuline superfamily,
alternative splicing, cell adhesion; 2.19A {Mus
musculus} PDB: 3mj7_B* 2npl_X
Length = 214
Score = 39.7 bits (92), Expect = 0.003
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLGTSTL 935
P + IG+ ++KC G +W KL S
Sbjct: 121 KPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQT 164
Score = 29.7 bits (66), Expect = 5.8
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 8 DEGLYSVIARNIASTISHSVTVHV 31
G YS +N + + + V
Sbjct: 187 YSGTYSCTVQNRVGSDQCMLRLDV 210
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human
coxsackievirus A21, cryo-electron
microscopy,virus-receptor complex, icosahedral virus;
HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3
b.1.1.4 b.1.1.4 b.1.1.4
Length = 450
Score = 40.2 bits (93), Expect = 0.004
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 897 REKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
R+ P + C A G P P ++ K GT L
Sbjct: 374 RDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPL 412
Score = 29.5 bits (65), Expect = 9.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
EG Y AR+ ++ VTV+V
Sbjct: 424 LEGTYLCRARSTQGEVTREVTVNVL 448
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine,
ligand-receptor complex, signaling protein-cytokin; HET:
NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Length = 313
Score = 39.9 bits (92), Expect = 0.004
Identities = 32/252 (12%), Positives = 65/252 (25%), Gaps = 41/252 (16%)
Query: 901 ITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQ 960
+ + CL +I ++ G T + + C T L
Sbjct: 93 LRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILD 152
Query: 961 YLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEV 1020
+ G H +I ++++ + V+ + T +L + P P +
Sbjct: 153 CVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEP----PML 208
Query: 1021 LAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEAT 1080
+P + + EP + + +
Sbjct: 209 RTMDPSPEAAPPQAGCLQLSW------------EPWQPGLHINQKCELRHKPQ------- 249
Query: 1081 RFLMLIFKHEVDWITLANNIDHEFWH-VKDLKRETNYTFRLSAKNVIG------WSEKGI 1133
+ E W + + + L T YT ++ WS
Sbjct: 250 -------RGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWS---- 298
Query: 1134 PSALFKTKEQAP 1145
PS +T E+A
Sbjct: 299 PSLELRTTERAA 310
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 115
Score = 37.4 bits (87), Expect = 0.005
Identities = 7/39 (17%), Positives = 10/39 (25%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
G E + V G +C + WF
Sbjct: 11 GRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFL 49
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain,
cytokine decoy RE virus/viral protein, type-1
interferon, soluble A/B-IFNR; HET: EPE; 2.10A
{Ectromelia virus}
Length = 329
Score = 39.8 bits (92), Expect = 0.005
Identities = 12/67 (17%), Positives = 17/67 (25%), Gaps = 4/67 (5%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKP----VIQWFKLGTSTLCYLPIVIPTTHKDA 949
F I V IG+ + C AV +I W + V
Sbjct: 229 RFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSG 288
Query: 950 YCVTSVL 956
+ L
Sbjct: 289 GITEATL 295
Score = 32.5 bits (73), Expect = 1.00
Identities = 5/40 (12%), Positives = 13/40 (32%), Gaps = 1/40 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLG 931
P + + +++ C + + I W+K
Sbjct: 128 PPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNN 167
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like
protein 3, nephrin- like 2, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: b.1.1.1
Length = 122
Score = 37.6 bits (87), Expect = 0.005
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKP-VIQWFK 929
P T + G+K ++KC P P I W
Sbjct: 14 PPIIS-STQTQHALHGEKGQIKCFIRSTPPPDRIAWSW 50
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural
plasticity, cell-surface dimerizatio adhesion; HET: NAG
FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4
PDB: 1p53_A*
Length = 265
Score = 39.3 bits (91), Expect = 0.005
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 897 REKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
R+ P + C A G P P ++ K GT L
Sbjct: 189 RDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPL 227
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer
suppressor, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 119
Score = 37.0 bits (86), Expect = 0.006
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
V +LK E YTFR+ A N G E P + E P
Sbjct: 78 VGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPESGP 116
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 39.1 bits (92), Expect = 0.007
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
+G G G+VY + A K + + K F E+ +M + H NLV L
Sbjct: 39 MGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase,
heparin-binding, nucleotide-binding, immunoglobulin
domain, alternatice splicing; NMR {Mus musculus}
Length = 95
Score = 36.3 bits (84), Expect = 0.007
Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS 933
+ ++ V GD L+++C + + I W + G
Sbjct: 10 WGVPVEVESLLVHPGDLLQLRC-RLRDDVQSINWLRDGVQ 48
Score = 30.5 bits (69), Expect = 0.84
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHV 31
D GLY+ + + + + + +V+V
Sbjct: 70 ADSGLYACVTSSPSGSDTTYFSVNV 94
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer
suppressor, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 114
Score = 36.6 bits (85), Expect = 0.008
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
DWI + D + DL +T Y FR+ A+N G G S LF+T + +
Sbjct: 58 DWIMETISGDRLTHQIMDLNLDTMYYFRIQARNSKGV---GPLSDPILFRTLKVSG 110
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 103
Score = 36.2 bits (84), Expect = 0.009
Identities = 8/37 (21%), Positives = 11/37 (29%), Gaps = 1/37 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
A F E+ + V C P + W K
Sbjct: 8 ANCFTEELTNLQVEEKGTAVFTC-KTEHPAATVTWRK 43
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type
III domain containing protein, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 115
Score = 36.5 bits (85), Expect = 0.010
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
++ LK + Y FRL+A++ G +T + +
Sbjct: 74 LQGLKPNSLYYFRLAARSPQGLGAS-TAEISARTMQSSG 111
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding
protein C, immunoglobulin domain, structural genomics,
NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Length = 100
Score = 35.8 bits (83), Expect = 0.012
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
A F + V G ++ + +PK ++W+K
Sbjct: 8 AAFAKILDPAYQVDKGGRVRFVV-ELADPKLEVKWYK 43
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane,
disulfide bond, glycoprotein, immunoglobulin domain,
membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A
{Homo sapiens}
Length = 589
Score = 38.8 bits (90), Expect = 0.012
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPS--ALFKTKEQAPEV 1147
V+DLK T Y FR+ G S A T E P
Sbjct: 263 VQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSK 305
Score = 33.8 bits (77), Expect = 0.43
Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKE 1142
+ + + H + + L +T Y R++A G + P F T +
Sbjct: 541 NETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDG--PEFTFTTPK 589
Score = 30.0 bits (67), Expect = 7.0
Identities = 8/57 (14%), Positives = 14/57 (24%), Gaps = 3/57 (5%)
Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
DW + + +L Y ++ G S K+ P
Sbjct: 444 ITDWQQEDGTVHRTY-LRGNLAESKCYLITVTPVYADGPGS--PESIKAYLKQAPPS 497
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral
protein-immune system compl; HET: NAG SUC; 1.99A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B*
2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C*
3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A
3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Length = 184
Score = 37.3 bits (86), Expect = 0.016
Identities = 4/33 (12%), Positives = 10/33 (30%)
Query: 903 IPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
++ G L + + P +Q +
Sbjct: 107 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI 139
Score = 31.9 bits (72), Expect = 0.80
Identities = 7/49 (14%), Positives = 12/49 (24%)
Query: 902 TIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAY 950
+ GD +E+ C A + W + T
Sbjct: 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKL 52
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related
receptor containing LDLR class A repeats, sorla; NMR
{Homo sapiens}
Length = 108
Score = 35.5 bits (82), Expect = 0.016
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 9/57 (15%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIG---WSEKGIPSALFKTKEQAP 1145
W + F +K+L T YT R++A G WS+ S T + +
Sbjct: 54 MWASQ--RAASNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSD----SKSITTIKGSG 104
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA,
receptor-ligand complex transferase; HET: NAG NDG MAN
BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Length = 347
Score = 38.2 bits (88), Expect = 0.016
Identities = 7/38 (18%), Positives = 13/38 (34%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P + + V +GD + ++C G W
Sbjct: 157 GVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWIL 194
Score = 33.6 bits (76), Expect = 0.37
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDN 34
+ G Y+++A N S S+ DN
Sbjct: 320 NNGNYTLLAANPFGQASASIMAAFMDN 346
Score = 30.1 bits (67), Expect = 5.3
Identities = 7/39 (17%), Positives = 12/39 (30%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
F V + G+P P ++W G+
Sbjct: 247 VSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGS 285
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth
factor-receptor complex, receptor tyrosine kinase, CY
4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus
musculus}
Length = 289
Score = 37.6 bits (87), Expect = 0.020
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
P + +P + + G+ ++ C A K G + L
Sbjct: 186 PPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKL 228
Score = 36.5 bits (84), Expect = 0.040
Identities = 8/44 (18%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVG-EPKPVIQWFKLGTSTL 935
A + + VV G + + CL K + + G +
Sbjct: 89 AHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQV 132
Score = 32.2 bits (73), Expect = 0.89
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
++ G Y S ++ ++V+D
Sbjct: 61 KNTGTYRCTELEDPMAGSTTIHLYVKD 87
Score = 30.3 bits (68), Expect = 4.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G+YS +A N T + ++ V +
Sbjct: 256 DAGIYSCVASNDVGTRTATMNFQVVE 281
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor
tyrosine kinase, growth factor cytoki dimerization,
transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Length = 524
Score = 38.1 bits (88), Expect = 0.020
Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Query: 893 APFFREKPI---TIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGTSTLCYLPIVIPTTHKD 948
F P+ T+ V G+ +++ PKP QW + + + ++
Sbjct: 310 KGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENES 369
Query: 949 AYCVTSVL 956
S L
Sbjct: 370 NIRYVSEL 377
Score = 37.3 bits (86), Expect = 0.038
Identities = 8/65 (12%), Positives = 16/65 (24%), Gaps = 1/65 (1%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGTSTLCYLPIVIPTTHKDAYC 951
P + + G++ + C V W + + T Y
Sbjct: 211 VPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYE 270
Query: 952 VTSVL 956
+ L
Sbjct: 271 RQATL 275
Score = 37.0 bits (85), Expect = 0.050
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 897 REKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
KP + ++C+A G P+P I W+
Sbjct: 410 NTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYF 442
Score = 33.5 bits (76), Expect = 0.50
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D G++ A N + + + T+ V D
Sbjct: 284 DSGVFMCYANNTFGSANVTTTLEVVD 309
Score = 29.6 bits (66), Expect = 7.0
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVE 32
+ G Y+ + N + + V+V
Sbjct: 386 EGGTYTFLVSNSDVNAAIAFNVYVN 410
Score = 29.6 bits (66), Expect = 8.8
Identities = 5/28 (17%), Positives = 7/28 (25%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVEDN 34
+ G A N S + N
Sbjct: 484 KHNGTVECKAYNDVGKTSAYFNFAFKGN 511
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 116
Score = 35.4 bits (82), Expect = 0.020
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 1085 LIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQA 1144
L + + ++ + + LK+ T Y+FR+ A N G P +T +
Sbjct: 53 LYYMEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVST-PDVAVRTLSDS 111
Query: 1145 P 1145
Sbjct: 112 G 112
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} PDB: 2yz8_A
Length = 103
Score = 35.0 bits (81), Expect = 0.022
Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
F+E + V+ G ++C+ PV +W
Sbjct: 8 PVRFQEALKDLEVLEGGAATLRCVLSSVAAPV-KWCY 43
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 130
Score = 35.8 bits (83), Expect = 0.023
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 1105 WHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ LK E+ Y FR++A+ GW E + + T++++
Sbjct: 87 YTATGLKPESVYLFRITAQTRKGWGEA-AEALVVTTEKRSG 126
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C,
C-protein, skeletal muscle fast- isoform, MYBPCF,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 101
Score = 35.0 bits (81), Expect = 0.023
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
V +GD++EM V E + W K
Sbjct: 9 VLIVTPLEDQQVFVGDRVEMAV-EVSEEGAQVMWMK 43
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase,
glycoprotein, receptor protei tyrosine phosphatase, cell
adhesion; HET: NAG; 3.10A {Homo sapiens}
Length = 731
Score = 37.8 bits (87), Expect = 0.024
Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
L T Y+F + A G+ F TK AP
Sbjct: 530 FFGLYPGTTYSFTIRASTAKGFGPPATNQ--FTTKISAPS 567
Score = 37.8 bits (87), Expect = 0.026
Identities = 18/119 (15%), Positives = 30/119 (25%), Gaps = 2/119 (1%)
Query: 1040 YVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANN 1099
+++ P R + E + + T+ +N
Sbjct: 602 QIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDN 661
Query: 1100 IDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTD 1158
+ + L +Y A + K I TK A EP QTD
Sbjct: 662 KTYNGYWNTPLLPYKSYRIYFQAASRANGETK-IDCVQVATKGAATPKPVPEP-EKQTD 718
Score = 34.8 bits (79), Expect = 0.24
Identities = 10/52 (19%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Query: 1098 NNIDHEFWHVKDLKRETNYTFRLSAKNV--IGWSEKGIPSALFKTKEQAPEV 1147
+D + + L +T Y + G G P+ +TK P
Sbjct: 311 QPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPG-PALRTRTKCADPMR 361
Score = 33.2 bits (75), Expect = 0.65
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 12/91 (13%)
Query: 1055 PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRET 1114
+ Y ++ QE + EV W T ++ H + +L T
Sbjct: 384 GYNVTRCHSYNLTVHYCYQVGGQEQV-------REEVSWDTENSHPQH---TITNLSPYT 433
Query: 1115 NYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
N + +L N G E + +T E P
Sbjct: 434 NVSVKLILMNPEGRKES--QELIVQTDEDLP 462
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 103
Score = 35.0 bits (81), Expect = 0.025
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ V G+ +E++C PV W K
Sbjct: 9 AAIIKPLEDQWVAPGEDVELRCELSRAGTPV-HWLK 43
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast
MYBP-C, C-protein, skeletal muscle fast isoform,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 35.6 bits (81), Expect = 0.026
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEP---KPVIQWFK 929
F +KP ++ V G + G+ KP I+WFK
Sbjct: 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFK 51
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural
genomics, riken structural genomics/proteomics
initiative, cell adhesion; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 108
Score = 34.9 bits (80), Expect = 0.026
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 9/59 (15%)
Query: 1092 DWITLANNI---DHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPS--ALFKTKEQAP 1145
W L + + E V L ++ Y FRL A S+ PS A T +
Sbjct: 50 GWEVLDPAVAGTETEL-LVPGLIKDVLYEFRLVAFAGSFVSD---PSNTANVSTSGLSG 104
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold,
transmembrane, MHC lipoprotein, polymorphism; 3.90A
{Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3
PDB: 1wip_A 1wiq_A 3t0e_E
Length = 363
Score = 37.1 bits (85), Expect = 0.030
Identities = 4/27 (14%), Positives = 9/27 (33%)
Query: 903 IPVVIGDKLEMKCLAVGEPKPVIQWFK 929
++ G L + + P +Q
Sbjct: 106 THLLQGQSLTLTLESPPGSSPSVQCRS 132
Score = 31.3 bits (70), Expect = 2.4
Identities = 7/43 (16%), Positives = 14/43 (32%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVK 50
D G ++ + + + V + S G QV+
Sbjct: 153 DSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVE 195
Score = 30.9 bits (69), Expect = 3.2
Identities = 6/34 (17%), Positives = 11/34 (32%)
Query: 902 TIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
+ GD +E+ C A + W +
Sbjct: 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKI 36
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498;
beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 102
Score = 34.7 bits (80), Expect = 0.031
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 886 ESRRDGHAPFFREKPI--TIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
S G F +E+P + G + C V + + + W+K
Sbjct: 2 SSGSSGKVVFAKEQPAHREVQAEAGASATLSC-EVAQAQTEVTWYK 46
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A
{Homo sapiens}
Length = 207
Score = 36.5 bits (84), Expect = 0.035
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 875 PEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKP-VIQWFK 929
+ EA+ + P F E ++ V + +KC K I W+K
Sbjct: 99 KKLQKEAEFQRQEWIRKQGPHFVE-YLSWEVTGECNVLLKCKVANIKKETHIVWYK 153
Score = 30.3 bits (68), Expect = 3.4
Identities = 2/35 (5%), Positives = 11/35 (31%), Gaps = 1/35 (2%)
Query: 896 FREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFK 929
F + + + ++ ++ A + +
Sbjct: 5 FTKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIF 39
Score = 29.9 bits (67), Expect = 4.6
Identities = 6/33 (18%), Positives = 14/33 (42%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTVHVEDNE 35
DEG Y+ ++ +T +V + + +
Sbjct: 67 KLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFK 99
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain,
fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB:
1x5k_A
Length = 211
Score = 36.3 bits (84), Expect = 0.038
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
DW+ + +++L +T Y F++ A+N G + F+T +
Sbjct: 151 AEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMS-EAVQFRTPKAHH 207
Score = 32.9 bits (75), Expect = 0.44
Identities = 12/59 (20%), Positives = 16/59 (27%), Gaps = 1/59 (1%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
+ N + V LK T Y F + S +A T E P
Sbjct: 49 NIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWS-MTAHGTTFELVPT 106
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK
receptor, receptor tyrosine kinase, 3D-domain swapping,
transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB:
1hcf_X
Length = 103
Score = 34.3 bits (79), Expect = 0.039
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
+ G Y++IA+N ++ H
Sbjct: 73 NNGDYTLIAKNEYGKDEKQISAHFMG 98
Score = 34.3 bits (79), Expect = 0.045
Identities = 7/25 (28%), Positives = 9/25 (36%)
Query: 905 VVIGDKLEMKCLAVGEPKPVIQWFK 929
+ G PKP +QWF
Sbjct: 13 PTSDHHWCIPFTVKGNPKPALQWFY 37
>1he7_A High affinity nerve growth factor receptor; transferase,
TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP:
b.1.1.4 PDB: 1wwa_X 1www_X
Length = 126
Score = 34.9 bits (80), Expect = 0.040
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVEDNENEYS 39
+ G Y+++A N S S+ DN E++
Sbjct: 73 VNNGNYTLLAANPFGQASASIMAAFMDNPFEFN 105
Score = 29.9 bits (67), Expect = 2.1
Identities = 7/35 (20%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 900 PITIPVVIGDKLEMKCLAV---GEPKPVIQWFKLG 931
P ++ + ++ C+ G+P P ++W G
Sbjct: 4 PASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNG 38
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 119
Score = 34.3 bits (79), Expect = 0.054
Identities = 8/42 (19%), Positives = 13/42 (30%)
Query: 1105 WHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
+ V L T YT ++A G + + P
Sbjct: 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPSGPS 117
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer
suppressor, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 123
Score = 34.5 bits (79), Expect = 0.065
Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 7/42 (16%)
Query: 1107 VKDLKRETNYTFRLSAKNVIG---WSEKGIPSALFKTKEQAP 1145
LK T Y F + WS +A T E +
Sbjct: 82 ATGLKPNTMYEFSVMVTKNRRSSTWSM----TAHATTYEASG 119
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 137
Score = 34.6 bits (79), Expect = 0.066
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAG 1163
+ DLK +Y ++ A+ + +F T P++ P P+ S+G
Sbjct: 86 LNDLKPAMDYHAKVQAEYNSIKGTP-SEAEIFTTLSCEPDI----PNPPRISGPSSG 137
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor
tyrosine kinase, 3D-domain swapping, transferase; 1.90A
{Homo sapiens} SCOP: b.1.1.4
Length = 118
Score = 34.0 bits (78), Expect = 0.067
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
+ G Y++IA+N T + ++ H
Sbjct: 76 NNGNYTLIAKNPLGTANQTINGHFLK 101
Score = 32.1 bits (73), Expect = 0.39
Identities = 7/40 (17%), Positives = 12/40 (30%), Gaps = 3/40 (7%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
P + + +E + G P P + W G
Sbjct: 8 PPRVVSLEEPE-LRLEHCIE--FVVRGNPPPTLHWLHNGQ 44
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2,
NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: b.1.2.1
Length = 108
Score = 34.0 bits (78), Expect = 0.069
Identities = 8/59 (13%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
K ++ + + L+ Y ++ A+ V G+ + F+T +
Sbjct: 48 KEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFS-GKMCFQTLTDSGP 105
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion;
2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 184
Score = 35.0 bits (80), Expect = 0.069
Identities = 7/41 (17%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGTS 933
P + + + G+ + C + P W+K+ S
Sbjct: 84 PRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDS 124
Score = 31.5 bits (71), Expect = 1.0
Identities = 8/34 (23%), Positives = 11/34 (32%), Gaps = 2/34 (5%)
Query: 901 ITIPVVIGDKLEMKCLAVGEPKPVIQ--WFKLGT 932
T +G K+ + C V W K G
Sbjct: 6 FTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGV 39
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase
receptor HTK, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 109
Score = 34.0 bits (78), Expect = 0.073
Identities = 8/41 (19%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 1105 WHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
++ LKR +Y ++ A++ G+ G +T+ +
Sbjct: 66 AELRGLKRGASYLVQVRARSEAGYGPFG-QEHHSQTQLDSG 105
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac
muscle, hypertrophic cardiomyopathy, actin-binding, cell
adhesion, disease mutation; NMR {Homo sapiens}
Length = 95
Score = 33.5 bits (77), Expect = 0.077
Identities = 6/36 (16%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
F +KP ++ V G + ++W +
Sbjct: 9 SAFSKKPRSVEVAAGSPAVFEA-ETERAGVKVRWQR 43
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix
bundle cytokine, receptor tyrosine kinase glycosylation;
HET: NAG BMA; 3.00A {Homo sapiens}
Length = 292
Score = 35.7 bits (82), Expect = 0.077
Identities = 5/36 (13%), Positives = 12/36 (33%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
P P + + G+ ++ C A + +
Sbjct: 187 PALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQ 222
Score = 32.2 bits (73), Expect = 0.90
Identities = 5/44 (11%), Positives = 12/44 (27%), Gaps = 1/44 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVG-EPKPVIQWFKLGTSTL 935
A + + V + CL + + ++ L
Sbjct: 89 ARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPL 132
Score = 32.2 bits (73), Expect = 0.98
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
++ G Y S ++ ++V+D
Sbjct: 61 QNTGTYRCTEPGDPLGGSAAIHLYVKD 87
Score = 31.5 bits (71), Expect = 1.9
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
+ G YS +A N+ S S+ V +
Sbjct: 255 QHAGNYSCVASNVQGKHSTSMFFRVVE 281
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 113
Score = 34.0 bits (78), Expect = 0.077
Identities = 5/34 (14%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 896 FREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ + + V +++ + C + P ++W K
Sbjct: 16 YPSGKVYVAAVRLERVVLTC-ELCRPWAEVRWTK 48
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor
tyrosine kinase, class III, recep ligand complex,
cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A
{Mus musculus}
Length = 290
Score = 35.5 bits (81), Expect = 0.082
Identities = 10/66 (15%), Positives = 16/66 (24%), Gaps = 3/66 (4%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGTSTLCYLPIVIPTTH--KDAY 950
P + + GD + C V W K+ + + H Y
Sbjct: 189 PVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNY 248
Query: 951 CVTSVL 956
L
Sbjct: 249 ERQETL 254
Score = 34.3 bits (78), Expect = 0.25
Identities = 4/42 (9%), Positives = 9/42 (21%), Gaps = 2/42 (4%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
F P+ ++C + +L
Sbjct: 94 LFLVGLPLF--GKEDSDALVRCPLTDPQVSQYSLIECDGKSL 133
Score = 32.4 bits (73), Expect = 0.89
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
D G++ A N + + + T+ V +
Sbjct: 262 DDSGVFMCYANNTFGSANVTTTLKVVE 288
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3;
structural genomics, joint center for struct genomics,
JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Length = 112
Score = 33.9 bits (77), Expect = 0.087
Identities = 6/34 (17%), Positives = 11/34 (32%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQW 927
P +P T + G + C A + +
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTF 44
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed
death-1 ligand 1, complex, costimulatory, immune system;
2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Length = 222
Score = 35.0 bits (80), Expect = 0.099
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDA-Y 950
+ I + + + E+ C A G PK + W L + ++ +
Sbjct: 115 APYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLF 174
Query: 951 CVTSVL 956
VTS L
Sbjct: 175 NVTSTL 180
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer
suppressor, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 106
Score = 33.4 bits (77), Expect = 0.11
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 1085 LIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKE 1142
L +D + ++ LK+ T Y+ R A N G G+ + T
Sbjct: 43 LFCTEVSTGKEQNIEVDGLSYKLEGLKKFTEYSLRFLAYNRYG---PGVSTDDITVVTLS 99
Query: 1143 QAP 1145
+
Sbjct: 100 DSG 102
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural
genomics, PSI-biology, NEW YORK struc genomics research
consortium, nysgrc; 2.30A {Homo sapiens}
Length = 124
Score = 33.8 bits (77), Expect = 0.11
Identities = 10/42 (23%), Positives = 14/42 (33%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
TI V G L +KC+ +QW T+
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTI 43
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6
R beta subunit, signaling protein; 2.00A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Length = 215
Score = 35.0 bits (80), Expect = 0.11
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 12/57 (21%)
Query: 1107 VKDLKRETNYTFRLSAKNVIG---WSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVW 1160
V+DLK T Y FR+ G WS+ A T E P +EP W
Sbjct: 168 VQDLKPFTEYVFRIRCMKEDGKGYWSDWS-EEASGITYEDRPS---KEP-----SFW 215
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin
type III, NG-CAM related cell adhesion molecule,
structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 125
Score = 33.5 bits (77), Expect = 0.12
Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 12/93 (12%)
Query: 1055 PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRET 1114
P + YR Y + + + R ++ L + L+ +
Sbjct: 39 PLKSIRGHLQGYRIYYWKTQSSSKRNR-------RHIEKKILTFQGSKTHGMLPGLEPFS 91
Query: 1115 NYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
+YT + N G G S +F T E +
Sbjct: 92 HYTLNVRVVNGKGE---GPASPDRVFNTPEGSG 121
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes
(CDON)binding...; fibronectin type III, FN3; NMR {Mus
musculus} SCOP: b.1.2.1
Length = 114
Score = 33.2 bits (76), Expect = 0.13
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
D+ D + + L+ ET+Y ++ N G SE + +TK ++
Sbjct: 58 DYKKDMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFS-NVMICETKARSG 110
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin
superfamily, integrin-binding, cell adhesion protein;
1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A
1vsc_A
Length = 202
Score = 34.4 bits (78), Expect = 0.16
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 905 VVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
IGD + + C G P W S L
Sbjct: 13 AQIGDSVSLTCSTTGCESPFFSWRTQIDSPL 43
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 113
Score = 32.9 bits (75), Expect = 0.16
Identities = 11/43 (25%), Positives = 14/43 (32%), Gaps = 7/43 (16%)
Query: 1107 VKDLKRETNYTFRLSAKNVIG---WSEKGIPSALFKTKEQAPE 1146
V LK T Y F + WS +A T E +
Sbjct: 72 VTGLKPNTLYEFSVMVTKGRRSSTWSM----TAHGTTFELSGP 110
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW-
type/skeletal muscle SLOW-isoform, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Length = 103
Score = 32.7 bits (75), Expect = 0.17
Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
++ G+++E++C V E ++WFK
Sbjct: 7 GIMVTKQLEDTTAYCGERVELEC-EVSEDDANVKWFK 42
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF
receptor, cancer, immune system-transfer complex; HET:
NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Length = 122
Score = 33.2 bits (75), Expect = 0.17
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 900 PITIPVVIGDKLEMKCLAVGEPKPVIQW 927
I + +G+KL + C A E I +
Sbjct: 15 SHGIELSVGEKLVLNCTARTELNVGIDF 42
Score = 32.8 bits (74), Expect = 0.20
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVED 33
D+GLY+ A + T +S V V +
Sbjct: 85 DQGLYTCAASSGLMTKKNSTFVRVHE 110
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2,
structural genomics, NPPSFA; NMR {Mus musculus}
Length = 106
Score = 32.7 bits (75), Expect = 0.17
Identities = 7/37 (18%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ + V ++ KC V + K +W+K
Sbjct: 8 QLEVLQDIADLTVKAAEQAVFKC-EVSDEKVTGKWYK 43
Score = 28.5 bits (64), Expect = 4.6
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTV 29
D DEG Y+ + A ++S +
Sbjct: 69 DVRPEDEGDYTFVPDGYALSLSAKLNF 95
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system;
HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Length = 262
Score = 34.5 bits (79), Expect = 0.18
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKP-VIQWFKLGTS 933
+P + V + + + C + P QWF GT+
Sbjct: 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTA 42
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative
splicing, cell adhesion, coiled coil, EGF-like domain,
extracellular matrix; 2.40A {Homo sapiens}
Length = 100
Score = 32.4 bits (74), Expect = 0.19
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+ +L+ T Y R+ A+N +S
Sbjct: 59 LTNLEPNTTYEIRIVARNGQQYSP 82
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera
phosphorylation, transmembrane, tyrosine-protein kinase,
glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A*
2x11_A 3mx0_A* 3mbw_A*
Length = 536
Score = 34.8 bits (79), Expect = 0.20
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ V + + + V DL+ NYTF + A+N + S +
Sbjct: 385 EASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLV-TSRSFRTASVSINQ 441
Score = 34.4 bits (78), Expect = 0.29
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+ DL +T Y ++ A G
Sbjct: 499 LDDLAPDTTYLVQVQALTQEGQGA 522
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND,
structural protein, muscle, antibo; 1.69A {Homo sapiens}
Length = 97
Score = 31.9 bits (73), Expect = 0.23
Identities = 3/38 (7%), Positives = 10/38 (26%), Gaps = 1/38 (2%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFK 929
+ + G ++ C + + W+
Sbjct: 1 GAMVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYF 38
Score = 30.4 bits (69), Expect = 1.0
Identities = 7/30 (23%), Positives = 10/30 (33%)
Query: 3 DCIGRDEGLYSVIARNIASTISHSVTVHVE 32
D D+G Y N S + V+
Sbjct: 64 DITKLDDGTYRCKVVNDYGEDSSYAELFVK 93
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 104
Score = 32.4 bits (74), Expect = 0.24
Identities = 6/37 (16%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKC-LAVGEPKPVIQWFK 929
++ T+ V+ G+ +C L+ W
Sbjct: 9 VGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTV 45
>1nn8_R CD155 antigen, poliovirus receptor; icosahedral virus,
picornavirus, virus/receptor complex; 15.00A {Homo
sapiens} SCOP: i.6.1.1 PDB: 1dgi_R
Length = 302
Score = 34.3 bits (78), Expect = 0.24
Identities = 5/41 (12%), Positives = 10/41 (24%), Gaps = 1/41 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGTS 933
+ ++ + C A P+P W
Sbjct: 218 EVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGP 258
Score = 32.8 bits (74), Expect = 0.61
Identities = 6/39 (15%), Positives = 12/39 (30%), Gaps = 1/39 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLG 931
P + + + +C++ G P I W
Sbjct: 118 PQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDL 156
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 111
Score = 32.3 bits (74), Expect = 0.29
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 1105 WHVKDLKRETNYTFRLSAKNVIGWSE 1130
V LK T Y F++ A+ G
Sbjct: 68 ATVSGLKPGTRYVFQVRARTSAGCGR 93
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell
adhesion, coiled coil, EGF-like domain, extracellular
matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A
1ten_A
Length = 104
Score = 32.0 bits (73), Expect = 0.30
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ +LK +T Y L ++ S F T A
Sbjct: 60 IGNLKPDTEYEVSLISRRGDMSSNPA--KETFTTGLAAA 96
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin
type III domain, alternative cell membrane, disulfide
bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Length = 290
Score = 33.6 bits (77), Expect = 0.34
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKE 1142
+ L +T Y R++A G + P F T +
Sbjct: 257 LSSLTSDTLYMVRMAAYTDEGGKDG--PEFTFTTPK 290
Score = 32.1 bits (73), Expect = 1.2
Identities = 8/58 (13%), Positives = 14/58 (24%), Gaps = 3/58 (5%)
Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
DW + + +L Y ++ G S K+ P
Sbjct: 145 ITDWQQEDGTVHRTY-LRGNLAESKCYLITVTPVYADGPGSP--ESIKAYLKQAPPSK 199
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics,
riken structural genomics/proteomics initiative, RSGI,
unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 120
Score = 32.2 bits (73), Expect = 0.35
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Query: 1092 DWITLANNIDHEFWHV-KDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
W L + E V +LK+ Y ++ G+ S +T E++
Sbjct: 63 SWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQ---GMDSESKTVRTTEESG 116
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2;
IG domain, structural protein; NMR {Homo sapiens} SCOP:
b.1.1.4
Length = 104
Score = 31.6 bits (72), Expect = 0.37
Identities = 6/35 (17%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 895 FFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
F ++ V G K+ + + + ++W K
Sbjct: 18 FQKKLEPAYQVSKGHKIRLTV-ELADHDAEVKWLK 51
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites,
calcium, cell adhesion molecules, cell cycle cell LINE,
conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C
3n1q_C 3n1m_C 3n1g_C 3n1p_C
Length = 102
Score = 31.6 bits (72), Expect = 0.41
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTK 1141
D+ ++ + L+ ET+Y ++ N G SE + +TK
Sbjct: 54 DYKRDVVEGSKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNV-MICETK 102
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 115
Score = 31.6 bits (72), Expect = 0.42
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVL 1148
+ DL TNYT + + S F T +AP L
Sbjct: 63 LHDLVLHTNYTATVRGLRGPNLTSP--ASITFTTGLEAPRDL 102
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein,
leukocyte antigen related, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 134
Score = 32.0 bits (73), Expect = 0.50
Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
+ + + +H W + L++ T Y + A +G G S+ L +T E P
Sbjct: 64 EDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGP---GPESSPVLVRTDEDVP 120
Query: 1146 E 1146
Sbjct: 121 S 121
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural
genomics, BSGC structure funded by NIH, protein
structure initiative, PSI; HET: GDP; 2.80A {Thermotoga
maritima} SCOP: b.40.4.5 c.37.1.8
Length = 301
Score = 33.3 bits (77), Expect = 0.51
Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 11/77 (14%)
Query: 137 GDELGRGVTGTI--SHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGD----E 190
G + G + HS V VED E RG+ K GD
Sbjct: 4 GGGMNLRRRGIVVSFHSNMVTVEDEETGERILCKLRGKFRLQNLKIYV-----GDRVEYT 58
Query: 191 LGRGVTGIVYHAVERSS 207
+G++ + + R +
Sbjct: 59 PDETGSGVIENVLHRKN 75
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling
protein complex, angiogenesis, glycoprotein, HOST-virus
interaction, membrane; HET: NAG BMA; 2.70A {Homo
sapiens} PDB: 2x1x_R*
Length = 213
Score = 32.8 bits (74), Expect = 0.57
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 7 RDEGLYSVIARNIASTISHSVTVHVED 33
D+GLY+ A + T +S V V +
Sbjct: 181 SDQGLYTCAASSGLMTKKNSTFVRVHE 207
Score = 29.0 bits (64), Expect = 9.5
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQW 927
I + +G+KL + C A E I +
Sbjct: 106 DVVLSPSHGIELSVGEKLVLNCTARTELNVGIDF 139
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK,
fibronectin type III (FN3) domain, structural genomics,
NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Length = 107
Score = 30.9 bits (70), Expect = 0.69
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKT 1140
+ L+ +T Y R+ +G P F+T
Sbjct: 66 LTKLQPDTTYIVRVRTLTPLGPGPFS-PDHEFRT 98
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Length = 132
Score = 31.6 bits (72), Expect = 0.72
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAPE 1146
++ L R T Y FR++A + G G + +T E +
Sbjct: 81 IEGLDRGTEYNFRVAALTINGT---GPATDWLSAETFESDLD 119
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton,
immunoglobulin domain, muscle protein, phosphorylation,
repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A
1tiu_A 2rq8_A
Length = 93
Score = 30.3 bits (69), Expect = 0.78
Identities = 6/34 (17%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 896 FREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
+ + V +G+ + + EP QW
Sbjct: 8 VEKPLYGVEVFVGETAHFEI-ELSEPDVHGQWKL 40
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion;
2.40A {Homo sapiens}
Length = 145
Score = 31.3 bits (70), Expect = 0.86
Identities = 11/64 (17%), Positives = 19/64 (29%)
Query: 872 GTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
P+ + D + + + VV G + +KC +QW
Sbjct: 17 MDSPDLGTDDDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPA 76
Query: 932 TSTL 935
TL
Sbjct: 77 QQTL 80
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine
phosphatase delta, R-PTP-delta, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 121
Score = 30.8 bits (70), Expect = 0.97
Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
+ +L + Y+ ++ A IG G S+ T+ +
Sbjct: 80 IGNLVPQKTYSVKVLAFTSIGD---GPLSSDIQVITQTGSG 117
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor,
sugarbridge, fibronectine domain, signaling,
cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC;
2.80A {Homo sapiens}
Length = 219
Score = 32.0 bits (72), Expect = 0.99
Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 9/55 (16%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPS-----ALFKTKEQAPEVLAEEPIFPQ 1156
+ +++++Y ++ A + G S +G S +F+T+ + +E
Sbjct: 168 PLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEEL----KEHHHHH 218
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A
{Homo sapiens} PDB: 1fnh_A
Length = 290
Score = 32.1 bits (73), Expect = 1.1
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+ L+ T YT + A SE
Sbjct: 259 ITGLEPGTEYTIYVIALKNNQKSE 282
Score = 30.5 bits (69), Expect = 3.5
Identities = 8/39 (20%), Positives = 12/39 (30%)
Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSE 1130
I D + + L+ T+Y L N S
Sbjct: 154 TPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSS 192
Score = 30.2 bits (68), Expect = 4.5
Identities = 7/40 (17%), Positives = 8/40 (20%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
V L T Y + A S P
Sbjct: 78 VSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPR 117
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 30.4 bits (69), Expect = 1.2
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAP 1145
+++L +T Y + A N G G PS TK+ +
Sbjct: 78 LENLLPDTQYFIEVGACNSAGC---GPPSDMIEAFTKKASG 115
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding
homology region (CHR), cell MEMB disease mutation,
glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo
sapiens}
Length = 483
Score = 32.1 bits (72), Expect = 1.3
Identities = 15/95 (15%), Positives = 22/95 (23%), Gaps = 18/95 (18%)
Query: 1054 EPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
E QE + ++ + L L
Sbjct: 403 HLPGNFAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVAL-----------DKLNPY 451
Query: 1114 TNYTFRLSAK--NVIGWSEKGIPS--ALFKTKEQA 1144
T YTFR+ WS+ S T E +
Sbjct: 452 TLYTFRIRCSTETFWKWSK---WSNKKQHLTTEAS 483
Score = 29.8 bits (66), Expect = 7.3
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 1105 WHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
+ L + Y F L+A N +G S+ + L E+
Sbjct: 344 LLFQMLPNQEIYNFTLNAHNPLGRSQ---STILVNITEKVY 381
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III
domain, oncofetal splice VARI extra-domain B, EIIIB,
ED-B, angiogenesis, integrin; 2.40A {Homo sapiens}
Length = 375
Score = 32.1 bits (73), Expect = 1.4
Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
E D L+ + + +L T Y +S+ S KT +P
Sbjct: 228 EEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTP--LRGRQKTGLDSP 281
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region
plasiticity, cell adhesion; HET: PG6; 2.50A {Homo
sapiens} PDB: 3alp_A* 3u82_B 3sku_E* 2l7j_A
Length = 331
Score = 32.0 bits (72), Expect = 1.4
Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 2/44 (4%)
Query: 892 HAPFFREKPITIPVVI-GDKLEMKCLAVGEPKPV-IQWFKLGTS 933
+ P + + +++ C A P W L S
Sbjct: 230 YEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGS 273
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2edl_A
2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Length = 108
Score = 30.0 bits (68), Expect = 1.4
Identities = 6/37 (16%), Positives = 11/37 (29%), Gaps = 2/37 (5%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
F + T G ++C ++W K
Sbjct: 8 PARFTQDLKTKEASEGATATLQCEL--SKVAPVEWKK 42
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic
receptor, signal transduction cytokine; HET: NAG; 2.80A
{Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A
1gcf_A
Length = 215
Score = 31.3 bits (70), Expect = 1.5
Identities = 25/239 (10%), Positives = 63/239 (26%), Gaps = 43/239 (17%)
Query: 914 KCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIE 973
CL ++ ++ G T ++ + A C + + + +I
Sbjct: 12 SCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIP 71
Query: 974 PDNVVMASVRSVQVKLID-LGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDV 1032
N+++ ++ V+ + LG ++ + P++ E P + A +
Sbjct: 72 RKNLLLYQYMAIWVQAENMLGSSESPK---LCLDPMDVVKLE--PPMLQALDIGPDVVSH 126
Query: 1033 WSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVD 1092
+ +P Y + +
Sbjct: 127 QPGCLWLSW------------KPWKPSEYMEQECELRYQPQ--------------LKGAN 160
Query: 1093 WITLANNIDHEFWH-VKDLKRETNYTFRLSAKNVIG------WSEKGIPSALFKTKEQA 1144
W + + + + L + YT ++ WS P + +A
Sbjct: 161 WTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWS----PGLQLRPTMKA 215
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody,
immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S
3cm9_S 3chn_J 3cm9_J
Length = 585
Score = 31.9 bits (71), Expect = 1.5
Identities = 13/115 (11%), Positives = 31/115 (26%), Gaps = 11/115 (9%)
Query: 842 DEEIDDERRNRINKYGAADTYTLR--RLRHE--------IGTRPEAHVEADALIESRRDG 891
E R +N ++++ LR E + + +
Sbjct: 270 KRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVN 329
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQ-WFKLGTSTLCYLPIVIPTT 945
P + V G + + C + I+ W + P+++ +
Sbjct: 330 EESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSE 384
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain,
dscaml1 protein, structural genomics; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 122
Score = 30.4 bits (69), Expect = 1.5
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 1101 DHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKEQAPE 1146
D E + + +LK+ Y + A N G G S+ T E P
Sbjct: 76 DSEVYTLDNLKKFAQYGVVVQAFNRAGT---GPSSSEINATTLESGPS 120
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S
de novo protein; HET: DIO; 1.00A {Synthetic}
Length = 98
Score = 29.7 bits (67), Expect = 1.5
Identities = 4/24 (16%), Positives = 6/24 (25%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+ L Y + A S
Sbjct: 59 ITGLTPGVEYVVSVYALKDNQESP 82
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily,
immune system; HET: NAG; 3.00A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Length = 201
Score = 31.1 bits (70), Expect = 1.6
Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 905 VVIGDKLEMKCLAVG-EPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVL 956
+ + + C G P+P + W + G V + Y V+S L
Sbjct: 118 IPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKL 170
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor
tyrosine kinase mertk, FN3 domain, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 124
Score = 30.2 bits (68), Expect = 1.7
Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 19/94 (20%)
Query: 1055 PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRET 1114
P +Q+ V YR ++++ + + + A +
Sbjct: 44 PTKQQDGELVGYRISHVWQSAGISKE-----LLEEVGQNGSRA--------RISVQVHNA 90
Query: 1115 NYTFRLSAKNVIG---WSEKGIPSALFKTKEQAP 1145
T R++A G +S+ P +F P
Sbjct: 91 TCTVRIAAVTRGGVGPFSD---PVKIFIPAHSGP 121
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond,
glycoprotein, immunoglobulin membrane, transmembrane;
HET: NAG; 2.21A {Mus musculus}
Length = 108
Score = 29.8 bits (67), Expect = 1.9
Identities = 8/43 (18%), Positives = 12/43 (27%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
+ + VV G + C +QW TL
Sbjct: 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTL 48
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 31.4 bits (70), Expect = 2.1
Identities = 20/93 (21%), Positives = 28/93 (30%), Gaps = 5/93 (5%)
Query: 578 LNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTL 637
+ + P+ +S PT+K Q +I G F V + VA K+ L
Sbjct: 2 MGECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQT---IADHTPVAIKIIAIEGPDL 58
Query: 638 HQVNTEFDNLRSLRHERIASLLEAYKPSTTASN 670
VN I E S N
Sbjct: 59 --VNGSHQKTFEEILPEIIISKELSLLSGEVCN 89
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF,
protein-protein complex, IMM system; HET: NAG FUL; 2.80A
{Homo sapiens} SCOP: b.1.1.1
Length = 120
Score = 29.8 bits (66), Expect = 2.1
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 8 DEGLYSVIARNIASTI-SHSVTVHVEDNENEYS 39
D G Y A ++ I SHS T++V D ++ +
Sbjct: 84 DNGSYRCSANFQSNLIESHSTTLYVTDVKHHHH 116
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG
containing, ligand binding protein,membr protein; HET:
NAG MAN; 2.70A {Homo sapiens}
Length = 477
Score = 31.2 bits (71), Expect = 2.4
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
A K + V G ++ C A G+P P I W
Sbjct: 384 RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLS 421
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 104
Score = 29.3 bits (66), Expect = 2.6
Identities = 3/25 (12%), Positives = 9/25 (36%), Gaps = 1/25 (4%)
Query: 905 VVIGDKLEMKCLAVGEPKPVIQWFK 929
+++ + C + W+K
Sbjct: 22 FTTSERVVLTC-ELSRVDFPATWYK 45
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.5 bits (68), Expect = 2.6
Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 19/90 (21%)
Query: 1173 ASPFRGQSEPET-RQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENR 1231
A R EPE+ R+ R +EL + ++A + +EE ++ +
Sbjct: 75 AQADRLTQEPESIRK----WREEQRKRLQELDAASKVMEQEWREKA---KKDLEEWNQRQ 127
Query: 1232 WLVPSEYMIKKRERAVFLGNRL--KEFSDE 1259
SE + K + NR+ K F +
Sbjct: 128 ----SEQVEKNKIN-----NRIADKAFYQQ 148
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil,
immunoglobulin, immune system, extracellular; HET: NAG;
3.10A {Homo sapiens} PDB: 3o4o_B*
Length = 349
Score = 31.0 bits (69), Expect = 2.6
Identities = 6/50 (12%), Positives = 16/50 (32%)
Query: 8 DEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPIT 57
D G Y+ + RN + + V ++ ++ ++
Sbjct: 90 DTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQR 139
Score = 29.8 bits (66), Expect = 6.2
Identities = 5/38 (13%), Positives = 12/38 (31%), Gaps = 4/38 (10%)
Query: 900 PITIPVVIGDKLEMKCLAV----GEPKPVIQWFKLGTS 933
+ G++L + C + + + W G
Sbjct: 233 HVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKK 270
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain,
SLOW-type myosin-binding protein C, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 100
Score = 29.2 bits (66), Expect = 2.7
Identities = 6/37 (16%), Positives = 11/37 (29%), Gaps = 2/37 (5%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
V +G ++ +KC +W K
Sbjct: 7 GLKILTPLTDQTVNLGKEICLKCEISENIPG--KWTK 41
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex,
costimulation, glycoprotein, immunoglo domain, membrane,
transmembrane, receptor; 1.60A {Mus musculus} PDB:
3bp5_B 3rnq_B 3bov_A 3rnk_B
Length = 202
Score = 30.4 bits (68), Expect = 2.8
Identities = 8/44 (18%), Positives = 16/44 (36%)
Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTST 934
A + R + V ++++ C A G P + W +
Sbjct: 101 VKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPA 144
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich,
structural genomics, PSI, protein structure initiative;
1.80A {Mus musculus} SCOP: b.1.1.4
Length = 122
Score = 29.5 bits (65), Expect = 3.0
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 7 RDEGLYSVIARNIASTI-SHSVTVHVEDNENEYS 39
D G YS + I SHSVT+HV + S
Sbjct: 89 SDNGSYSCSTNFNSQVINSHSVTIHVRERSQNSS 122
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin
domain, cytokine-cytokine REC complex; HET: NAG; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Length = 214
Score = 30.1 bits (67), Expect = 3.3
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 11/47 (23%)
Query: 1107 VKDLKRETNYTFRLSAKNVIG-------WSEKGIPSALFKTKEQAPE 1146
++ L +T Y F++ K + G WS F+TK A
Sbjct: 169 LETLTPDTQYEFQVRVKPLQGEFTTWSPWS----QPLAFRTKPAALG 211
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A*
1qa9_A
Length = 182
Score = 29.9 bits (67), Expect = 3.4
Identities = 4/36 (11%), Positives = 12/36 (33%), Gaps = 2/36 (5%)
Query: 900 PITIPVVI--GDKLEMKCLAVGEPKPVIQWFKLGTS 933
++ P + + C + P + ++ G
Sbjct: 105 RVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKH 140
Score = 29.1 bits (65), Expect = 7.1
Identities = 5/38 (13%), Positives = 12/38 (31%), Gaps = 2/38 (5%)
Query: 900 PITIPVVIGD--KLEMKCLAVGEPKPVIQWFKLGTSTL 935
+ +G L++ + + I+W K
Sbjct: 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKK 43
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor,
CD32, immunoglobulin superfamily, low responder
polymorphism, cell membrane; HET: NAG; 1.50A {Homo
sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C*
2fcb_A
Length = 170
Score = 29.8 bits (67), Expect = 3.4
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGTS 933
+ +P I V+ D + + C P+ IQWF G
Sbjct: 5 AVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNL 45
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY
docking, cell adhesion, structural protein; NMR {Homo
sapiens}
Length = 201
Score = 30.0 bits (67), Expect = 3.7
Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Query: 1105 WHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGV 1164
+ +K LK Y +L + G E + T + + +T +S V
Sbjct: 58 YTIKGLKPGVVYEGQLISIQQYGHQE---VTRFDFTTTSTSTPVTSNTVTGETTPFSPLV 114
Query: 1165 LAYVLLSGASP 1175
++ +
Sbjct: 115 ATSESVTEITA 125
Score = 29.6 bits (66), Expect = 4.4
Identities = 4/24 (16%), Positives = 7/24 (29%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+ DL Y + + G
Sbjct: 169 IPDLLPGRKYIVNVYQISEDGEQS 192
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon,
OKT3 FAB, signaling protein/antibiotic complex; 2.10A
{Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Length = 204
Score = 30.2 bits (67), Expect = 3.8
Identities = 11/80 (13%), Positives = 21/80 (26%), Gaps = 6/80 (7%)
Query: 854 NKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDG---HAPFFREKPITIPVVI-GD 909
R + + A + ++++DG + V I G
Sbjct: 70 QNKSKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGT 129
Query: 910 KLEMKCLAVGEPKPVIQWFK 929
+ + C P I W
Sbjct: 130 TVILTCPQ--YPGSEILWQH 147
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin
type-III, beta-N-acetylglucosaminidase, cohesin,
hydrolase; 1.80A {Clostridium perfringens}
Length = 238
Score = 30.3 bits (67), Expect = 3.8
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTK 1141
K L R T Y F+++AK G S +T
Sbjct: 204 FKKLNRHTIYNFKIAAKYSNGEVSSK-ESLTLRTA 237
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular
matrix, adhesion, fusion protein, structural protein;
2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Length = 186
Score = 29.7 bits (67), Expect = 3.9
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 1105 WHVKDLKRETNYTFRLSAKNVIGWSE 1130
+ ++ L T YT L A+ S+
Sbjct: 60 FILRGLDAGTEYTISLVAEKGRHKSK 85
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer
suppressor, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 124
Score = 29.2 bits (66), Expect = 4.0
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSA--LFKTKE 1142
L++ + Y+F++SA V G G PS +T E
Sbjct: 89 FTGLEKGSQYSFQVSAMTVNGT---GPPSNWYTAETPE 123
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit;
immunoglobulin fold, glycoprotein, IGE-binding Pro
immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP:
b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A*
1j88_A* 1j89_A* 1j87_A*
Length = 176
Score = 29.9 bits (67), Expect = 4.0
Identities = 7/42 (16%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGT 932
P P + G+ + + C + +WF G+
Sbjct: 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGS 44
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine,
hormone-hormone recep complex; 2.00A {Homo sapiens} PDB:
3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B
3ew3_B 3npz_B 1f6f_B 2lfg_A
Length = 210
Score = 30.1 bits (67), Expect = 4.0
Identities = 10/62 (16%), Positives = 17/62 (27%), Gaps = 9/62 (14%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIG----WSEKGIPSALFKTKEQ 1143
+ +W EF + L Y ++ K G WS P+ +
Sbjct: 151 EKAAEWEIHFAGQQTEF-KILSLHPGQKYLVQVRCKPDHGYWSAWS----PATFIQIPSD 205
Query: 1144 AP 1145
Sbjct: 206 FT 207
>1rlf_A RLF, RLF-RBD; signal transduction protein; NMR {Mus musculus} SCOP:
d.15.1.5
Length = 90
Score = 28.2 bits (63), Expect = 4.2
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 220 GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELL 268
G+ YKS+ D + R L + + F ++ L G EL
Sbjct: 18 GSVYKSILVTSQDKAPSVISRVLKKNNRDSAVASEFELVQLLPGDRELT 66
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P
structural and functional analyses, riken structural
genomics/proteomics initiative; NMR {Homo sapiens}
Length = 113
Score = 28.5 bits (64), Expect = 4.8
Identities = 6/37 (16%), Positives = 11/37 (29%), Gaps = 2/37 (5%)
Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
F E G ++C ++W+K
Sbjct: 19 PIKFTEGLRNEEATEGATAVLRCELSKMAP--VEWWK 53
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex;
HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1
b.1.2.1
Length = 247
Score = 29.8 bits (66), Expect = 5.1
Identities = 12/81 (14%), Positives = 24/81 (29%), Gaps = 16/81 (19%)
Query: 1080 TRFLMLIFKHEV--------DWITLANNIDHEFWH-VKDLKRETNYTFRLSAKNVIGWSE 1130
RFL +H V W ++D+ + + + YTFR+ ++
Sbjct: 159 NRFLNHCLEHLVQYRTDWDHSWTEQ--SVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGS 216
Query: 1131 KGIPS-----ALFKTKEQAPE 1146
S + +
Sbjct: 217 AQHWSEWSHPIHWGSNTSKEN 237
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of
fibronectin-III domains, FOU fibronectin-III domains PER
chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP:
b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A*
1egj_A* 1c8p_A
Length = 419
Score = 30.3 bits (67), Expect = 5.1
Identities = 11/72 (15%), Positives = 18/72 (25%)
Query: 1089 HEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVL 1148
D L +N + L + Y R+ + G G PS +
Sbjct: 157 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 216
Query: 1149 AEEPIFPQTDVW 1160
E +
Sbjct: 217 DEAQPQNLECFF 228
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain,
cell adhesion, cell junction, glycoprotein,
immunoglobulin domain, membrane; HET: NAG FUC; 2.19A
{Mus musculus} PDB: 3mj7_A* 3mj9_A*
Length = 268
Score = 29.8 bits (66), Expect = 5.2
Identities = 6/52 (11%), Positives = 15/52 (28%), Gaps = 3/52 (5%)
Query: 894 PFFREKPITIPVVIGDKLEMKCL---AVGEPKPVIQWFKLGTSTLCYLPIVI 942
P + V +G+ + M C+ + + W ++
Sbjct: 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLF 57
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin
type 3 fold, membrane and SOL glycosylation, immune
system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB:
3di3_B* 3di2_B*
Length = 223
Score = 29.8 bits (66), Expect = 5.4
Identities = 12/65 (18%), Positives = 20/65 (30%), Gaps = 11/65 (16%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIG-------WSEKGIPSALFKT 1140
K E W + + + L+ Y ++ + WS PS F+T
Sbjct: 157 KDENKWTHVNLSSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWS----PSYYFRT 212
Query: 1141 KEQAP 1145
E
Sbjct: 213 PEINN 217
>1lfd_A Ralgds; RAL, effector interaction; HET: GNP; 2.10A {Rattus
norvegicus} SCOP: d.15.1.5 PDB: 2b3a_A
Length = 87
Score = 27.9 bits (62), Expect = 5.6
Identities = 7/49 (14%), Positives = 21/49 (42%)
Query: 220 GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELL 268
GN YKS+ D + + + + + + + + ++ ++ +L
Sbjct: 15 GNMYKSILVTSQDKAPTVIRKAMDKHNLDEDEPEDYELLQIISEDHKLK 63
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein,
neurite growth regulation; HET: NAG BMA; 2.00A {Mus
musculus}
Length = 361
Score = 29.8 bits (67), Expect = 6.2
Identities = 5/29 (17%), Positives = 10/29 (34%)
Query: 899 KPITIPVVIGDKLEMKCLAVGEPKPVIQW 927
K +GD L ++C + +
Sbjct: 252 KESAWEAHLGDTLTIRCDTKQQGMTKVWV 280
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex,
GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
PDB: 1p9m_A
Length = 303
Score = 29.8 bits (66), Expect = 6.3
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 1107 VKDLKRETNYTFRLSAKNVIG---WSEKGIPSALFKTKE 1142
V+DLK T Y FR+ G WS+ A T E
Sbjct: 264 VQDLKPFTEYVFRIRCMKEDGKGYWSDW-SEEASGITYE 301
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune
system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A
4f8q_A
Length = 226
Score = 29.3 bits (65), Expect = 6.5
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 7/69 (10%)
Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGE-PKPVIQWFKLGTSTLCYLPIVIPTTHKDA- 949
A + + + + ++C + G P+P IQW +P V D
Sbjct: 117 VAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGEN---IPTVEAPVVADGV 173
Query: 950 --YCVTSVL 956
Y V + +
Sbjct: 174 GLYAVAASV 182
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB:
1mfn_A 2mfn_A 2ck2_A
Length = 368
Score = 29.8 bits (67), Expect = 6.5
Identities = 3/24 (12%), Positives = 5/24 (20%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+L Y + S
Sbjct: 62 FDNLSPGLEYNVSVYTVKDDKESV 85
Score = 29.8 bits (67), Expect = 7.1
Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQT 1157
+ +L T Y +S+ S KT +P + I +
Sbjct: 153 LTNLLPGTEYVVSVSSVYEQHESTP--LRGRQKTGLDSPTGIDFSDITANS 201
Score = 29.4 bits (66), Expect = 8.3
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+ +L T Y + A N S
Sbjct: 243 LTNLTPGTEYVVSIVALNGREESP 266
Score = 29.4 bits (66), Expect = 9.3
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 1106 HVKDLKRETNYTFRLSAKNVIGWSE 1130
+ LK +YT + A G S
Sbjct: 332 TISGLKPGVDYTITVYAVTGRGDSP 356
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin
domain, cytokine-cytokine REC complex; HET: NAG; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C*
3qaz_C*
Length = 199
Score = 29.3 bits (65), Expect = 6.6
Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 11/65 (16%)
Query: 1080 TRFLMLIFKHEV--------DWITLANNIDHEFWH-VKDLKRETNYTFRLSAKNVIGWSE 1130
RFL +H V W ++D+ + + + YTFR+ ++
Sbjct: 121 NRFLNHCLEHLVQYRTDWDHSWTEQ--SVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGS 178
Query: 1131 KGIPS 1135
S
Sbjct: 179 AQHWS 183
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.2.1
Length = 105
Score = 28.2 bits (63), Expect = 7.1
Identities = 6/24 (25%), Positives = 8/24 (33%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+ L T+Y RL A
Sbjct: 63 LLGLFPSTSYNARLQAMWGQSLLP 86
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine
receptor,interleukin-4, cytokine/receptor complex; 2.30A
{Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B*
3bpo_B*
Length = 207
Score = 29.2 bits (65), Expect = 7.3
Identities = 14/89 (15%), Positives = 25/89 (28%), Gaps = 21/89 (23%)
Query: 1074 ELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV-----------KDLKRETNYTFRLSA 1122
+L + V+ + + D ++V LK +Y R+ A
Sbjct: 119 SNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRA 178
Query: 1123 KNVIG------WSEKGIPSALFKTKEQAP 1145
WS PS + + P
Sbjct: 179 WAQAYNTTWSEWS----PSTKWHNSYREP 203
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein,
immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG;
2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB:
1p9m_C 2arw_A
Length = 325
Score = 29.4 bits (65), Expect = 7.5
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 9/86 (10%)
Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIG---WSEKGIPSALFKTKEQA 1144
+ + T + D + +L A+ G WSE P A+ ++
Sbjct: 241 ERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSE-WSPEAMGTPWTES 299
Query: 1145 PEVLAEEPIF-----PQTDVWSAGVL 1165
AE + T+ +L
Sbjct: 300 RSPPAENEVSTPMQALTTNKDDDNIL 325
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization,
cell adhesion, protein binding, oncoprotein; 2.01A {Homo
sapiens} PDB: 2fnb_A
Length = 203
Score = 29.0 bits (65), Expect = 7.5
Identities = 5/24 (20%), Positives = 9/24 (37%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+ +L T Y +S+ S
Sbjct: 172 LTNLLPGTEYVVSVSSVYEQHEST 195
Score = 28.6 bits (64), Expect = 9.3
Identities = 5/24 (20%), Positives = 8/24 (33%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
V L+ +Y + G S
Sbjct: 81 VTGLEPGIDYDISVYTVKNGGEST 104
>1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine
hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1
c.40.1.1
Length = 349
Score = 29.4 bits (67), Expect = 7.9
Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI 332
+ PG +A PG +H+ L G + +I
Sbjct: 220 VLPGHAYIA-PGDKHMELARSGANYQI 245
Score = 29.4 bits (67), Expect = 7.9
Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 506 LTPGDLLVAHPGGRHLLLTDFGLSRRI 532
+ PG +A PG +H+ L G + +I
Sbjct: 220 VLPGHAYIA-PGDKHMELARSGANYQI 245
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 105
Score = 27.8 bits (62), Expect = 9.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
+ DL+ T Y +SA G SE
Sbjct: 65 LPDLQAATKYRVLVSAIYAAGRSE 88
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta
sandwich, immunoglobulin-like, immune system receptor;
1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A
1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Length = 175
Score = 28.7 bits (64), Expect = 9.7
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGTS 933
+P V+ D + +KC P+ QWF +
Sbjct: 8 AVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESL 48
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens}
SCOP: b.1.2.1
Length = 94
Score = 27.4 bits (61), Expect = 9.9
Identities = 5/24 (20%), Positives = 12/24 (50%)
Query: 1107 VKDLKRETNYTFRLSAKNVIGWSE 1130
++ L+ + YT + A + S+
Sbjct: 59 LQGLRPGSEYTVSVVALHDDMESQ 82
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.135 0.402
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 20,429,351
Number of extensions: 1288701
Number of successful extensions: 5617
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4588
Number of HSP's successfully gapped: 1671
Length of query: 1310
Length of database: 6,701,793
Length adjustment: 105
Effective length of query: 1205
Effective length of database: 3,770,088
Effective search space: 4542956040
Effective search space used: 4542956040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.2 bits)