Query psy5280
Match_columns 202
No_of_seqs 274 out of 1449
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 22:32:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5280.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5280hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.9 1.2E-20 4.1E-25 134.0 12.9 96 101-198 11-106 (107)
2 3knb_A Titin; IG-like, titin, 99.8 1.1E-19 3.9E-24 127.2 13.0 95 101-197 3-99 (100)
3 3rbs_A Myomesin-1; immunoglobu 99.8 7E-20 2.4E-24 144.0 11.8 135 58-197 23-207 (207)
4 1g1c_A Immunoglobulin-like dom 99.8 1.3E-18 4.3E-23 120.2 14.4 95 102-197 4-98 (99)
5 3b43_A Titin; I-SET IG fold, e 99.8 2.7E-19 9.3E-24 159.6 13.4 189 8-198 224-477 (570)
6 3qp3_A Titin; I-SET IG-like, s 99.8 3.2E-18 1.1E-22 119.1 14.8 98 99-198 4-101 (103)
7 2a38_A Titin; Z1Z2, structural 99.8 2.1E-18 7.2E-23 131.8 14.2 138 57-196 25-194 (194)
8 2j8h_A Titin, connectin; cardi 99.8 2.2E-18 7.7E-23 132.1 13.8 149 46-196 3-196 (197)
9 3b43_A Titin; I-SET IG fold, e 99.8 7E-19 2.4E-23 156.9 12.2 187 8-196 318-569 (570)
10 2r15_A Myomesin-1; sarcomeric 99.8 1.5E-17 5.2E-22 128.7 17.9 142 57-198 22-211 (212)
11 2kdg_A Myotilin; immonoglobuli 99.8 7E-18 2.4E-22 116.7 11.6 96 102-198 4-99 (100)
12 1u2h_A APEG-1, aortic preferen 99.8 1.5E-17 5.3E-22 114.7 13.0 95 102-197 4-98 (99)
13 3puc_A Titin; I-SET IG-like do 99.8 2.5E-17 8.5E-22 113.5 14.1 94 102-197 5-98 (99)
14 2cqv_A MLCK, myosin light chai 99.8 1.3E-17 4.5E-22 118.4 12.3 95 102-198 6-100 (114)
15 2kkq_A Myotilin; unknown funct 99.8 1.6E-17 5.4E-22 118.9 12.8 100 98-198 10-110 (116)
16 1wit_A Twitchin 18TH IGSF modu 99.8 7E-18 2.4E-22 115.6 10.3 91 102-196 1-93 (93)
17 2y23_A Myomesin; structural pr 99.8 2.8E-18 9.7E-23 140.1 9.7 135 57-196 127-311 (312)
18 3kld_A Contactin 4, axcam, BIG 99.7 5.1E-18 1.7E-22 144.0 10.9 136 57-198 225-384 (384)
19 2yd1_A Tyrosine-protein phosph 99.7 2.5E-17 8.5E-22 128.3 13.9 150 44-199 3-202 (212)
20 2rik_A Titin; I-SET IG fold, p 99.7 1.1E-16 3.9E-21 129.2 17.6 141 57-198 25-192 (284)
21 2c5d_C AXL oncogene, tyrosine- 99.7 3.1E-17 1.1E-21 125.8 13.3 130 57-195 22-191 (195)
22 2rik_A Titin; I-SET IG fold, p 99.7 3.9E-17 1.3E-21 132.0 14.2 139 57-197 119-284 (284)
23 2yr3_A Myosin light chain kina 99.7 2.4E-17 8.1E-22 114.0 11.1 92 100-196 8-99 (99)
24 3irg_B Obscurin-like protein 1 99.7 5.3E-17 1.8E-21 113.5 12.9 96 101-198 11-106 (107)
25 2wv3_A Neuroplastin; igcam, me 99.7 1.1E-16 3.7E-21 122.4 15.6 138 57-196 23-189 (190)
26 2dm2_A Palladin; beta-sandwich 99.7 1.6E-17 5.6E-22 117.1 9.9 98 101-199 6-104 (110)
27 2yd6_A PTPRD protein; hydrolas 99.7 1E-16 3.4E-21 125.0 15.3 139 57-197 26-204 (212)
28 1waa_A Titin; metal binding pr 99.7 6.8E-17 2.3E-21 111.6 12.6 90 101-197 3-92 (93)
29 1fhg_A Telokin; immunoglobulin 99.7 8.7E-17 3E-21 120.4 13.8 97 101-198 39-135 (154)
30 2iep_A Muscle-specific kinase 99.7 1.2E-17 4.1E-22 127.3 8.7 137 57-198 27-191 (192)
31 3irg_A Titin; IG-like, titin, 99.7 1.1E-16 3.8E-21 110.1 12.8 94 102-197 4-99 (100)
32 2edj_A Roundabout homolog 2; K 99.7 3.2E-17 1.1E-21 113.5 10.0 93 101-198 6-99 (100)
33 2v5t_A NCAM2, N-CAM 2, neural 99.7 6.3E-17 2.2E-21 122.8 12.2 139 57-198 22-189 (189)
34 2y25_A Myomesin; structural pr 99.7 1.5E-16 5.1E-21 130.1 14.6 96 103-198 221-316 (317)
35 2bk8_A Connectin, M1, titin he 99.7 3.4E-16 1.2E-20 107.8 14.0 91 107-199 5-96 (97)
36 2dm3_A KIAA0992 protein, palla 99.7 1.9E-17 6.4E-22 116.5 7.4 98 101-199 7-104 (110)
37 2nzi_A Titin; IG-domain, FNIII 99.7 2.6E-16 9.1E-21 128.3 15.4 151 45-197 2-197 (305)
38 2yuz_A Myosin-binding protein 99.7 5.2E-17 1.8E-21 113.5 9.2 91 102-198 6-96 (100)
39 3lcy_A Titin; A-BAND, IG tande 99.7 1.8E-16 6.2E-21 120.9 12.7 140 57-197 27-196 (197)
40 1nct_A Titin; cell adhesion, g 99.7 2.8E-17 9.6E-22 115.8 7.5 95 100-196 11-105 (106)
41 2vr9_A Roundabout 1, ROBO; imm 99.7 9.8E-17 3.3E-21 124.8 11.1 150 44-198 6-207 (217)
42 2e7c_A Myosin-binding protein 99.7 4.2E-16 1.4E-20 111.3 13.1 95 102-198 20-116 (118)
43 2ckn_A Basic fibroblast growth 99.7 9.2E-17 3.2E-21 110.6 9.2 88 101-195 7-94 (95)
44 3laf_A Deleted in colorectal c 99.7 7.1E-17 2.4E-21 136.4 10.1 137 57-198 241-402 (403)
45 1cs6_A Axonin-1; neural cell a 99.7 1.2E-16 4.2E-21 134.4 11.4 135 57-197 227-382 (382)
46 3caf_A Fibroblast growth facto 99.7 5.5E-17 1.9E-21 112.2 7.5 95 102-196 3-100 (100)
47 1bih_A Hemolin; insect immunit 99.7 3.4E-16 1.2E-20 131.9 13.8 133 57-195 232-394 (395)
48 1wwb_X Protein (brain derived 99.7 3.5E-16 1.2E-20 109.7 11.5 82 117-198 14-99 (103)
49 3s97_C Contactin-1; carbonic a 99.7 1.5E-16 5E-21 121.7 10.4 135 57-197 28-201 (201)
50 3cx2_A Myosin-binding protein 99.7 4.4E-16 1.5E-20 109.7 12.0 94 103-197 4-108 (108)
51 1rhf_A Tyrosine-protein kinase 99.7 4.9E-16 1.7E-20 117.7 13.0 129 57-196 22-182 (182)
52 3b5h_A Cervical EMMPRIN, HAB18 99.7 1.4E-15 4.8E-20 115.4 15.3 137 57-197 18-183 (184)
53 3kvq_A Vascular endothelial gr 99.7 1.1E-16 3.6E-21 112.1 7.6 93 102-198 9-101 (108)
54 1epf_A NCAM, protein (neural c 99.7 6.1E-16 2.1E-20 117.8 12.4 134 57-195 22-189 (191)
55 2lu7_A Obscurin-like protein 1 99.7 2.3E-16 7.8E-21 107.1 8.9 82 110-198 3-84 (84)
56 2va4_A NCAM2, N-CAM 2, neural 99.7 2.4E-15 8.3E-20 114.2 15.5 137 57-196 24-192 (192)
57 3p3y_A Neurofascin; IG domains 99.7 4.1E-16 1.4E-20 131.6 12.3 135 57-197 242-403 (404)
58 2yd9_A Receptor-type tyrosine- 99.7 6.6E-16 2.3E-20 126.3 12.6 135 57-199 128-293 (304)
59 1qz1_A Neural cell adhesion mo 99.7 7.6E-16 2.6E-20 124.6 12.7 137 58-197 121-290 (291)
60 1he7_A High affinity nerve gro 99.7 7E-16 2.4E-20 112.6 10.9 81 118-198 14-100 (126)
61 2wim_A N-CAM 2, NCAM2, neural 99.7 3.9E-16 1.3E-20 126.3 9.8 139 58-199 119-286 (291)
62 1gxe_A Myosin binding protein 99.6 3.8E-16 1.3E-20 115.9 8.5 81 115-196 29-138 (139)
63 2eo9_A Roundabout homolog 1; b 99.6 1.4E-16 4.8E-21 113.7 5.8 93 101-198 6-99 (118)
64 2v44_A NCAM2, neural cell adhe 99.6 1.4E-15 4.8E-20 115.8 11.4 133 57-195 22-185 (189)
65 2ifg_A High affinity nerve gro 99.6 1.8E-15 6.1E-20 126.9 13.0 137 57-198 178-346 (347)
66 3grw_A Fibroblast growth facto 99.6 1.5E-15 5.1E-20 119.8 11.8 142 57-198 35-219 (241)
67 2v9r_A Roundabout homolog 1; p 99.6 4.3E-16 1.5E-20 120.2 8.4 136 57-198 29-203 (212)
68 3k0w_A Mucosa-associated lymph 99.6 2.1E-15 7.3E-20 118.1 12.1 130 57-197 38-202 (218)
69 2lvc_A Obscurin-like protein 1 99.6 7.7E-16 2.6E-20 106.0 8.4 87 103-195 4-91 (91)
70 3ojm_B Fibroblast growth facto 99.6 1.2E-15 4.2E-20 119.0 10.5 142 57-198 39-222 (231)
71 1itb_B Type 1 interleukin-1 re 99.6 1.9E-15 6.6E-20 123.8 12.2 136 62-197 134-314 (315)
72 2yd9_A Receptor-type tyrosine- 99.6 5.2E-15 1.8E-19 120.9 14.5 146 45-195 4-199 (304)
73 4fa8_A Secreted protein BARF1; 99.6 1.4E-16 4.9E-21 125.0 4.9 132 57-190 13-195 (203)
74 2dav_A SLOW MYBP-C, myosin-bin 99.6 2.3E-15 8E-20 109.9 10.9 94 103-197 7-111 (126)
75 2jll_A NCAM2, neural cell adhe 99.6 3.9E-15 1.3E-19 125.3 14.0 138 57-196 20-193 (389)
76 2edn_A Myosin-binding protein 99.6 1.2E-15 4E-20 110.3 9.1 96 102-198 11-117 (118)
77 2yuv_A Myosin-binding protein 99.6 5.8E-15 2E-19 102.3 11.7 91 102-198 6-96 (100)
78 3m45_A Cell adhesion molecule 99.6 3.8E-15 1.3E-19 103.7 10.8 95 102-198 5-107 (108)
79 1x44_A Myosin-binding protein 99.6 3.8E-15 1.3E-19 103.8 10.4 89 103-198 7-97 (103)
80 2edf_A Obscurin; beta-sandwich 99.6 3.3E-15 1.1E-19 103.9 10.0 91 101-198 6-96 (103)
81 2dlt_A Myosin binding protein 99.6 1.4E-15 5E-20 106.5 7.7 91 101-196 6-96 (106)
82 2k1m_A Myosin-binding protein 99.6 6.6E-15 2.3E-19 101.2 10.6 87 103-196 8-94 (95)
83 2eny_A Obscurin; beta-sandwich 99.6 2.1E-15 7.1E-20 105.9 7.8 91 102-198 7-98 (104)
84 4fqp_A Poliovirus receptor; im 99.6 3.5E-15 1.2E-19 122.6 9.7 129 62-197 143-304 (313)
85 3sgj_C Human FCG3A receptor; r 99.6 3.8E-15 1.3E-19 116.3 9.0 131 57-198 27-175 (204)
86 2cr6_A KIAA1556 protein, obscu 99.6 1.6E-15 5.4E-20 108.0 6.2 91 103-198 13-103 (115)
87 2e6p_A Obscurin-like protein 1 99.6 6.2E-15 2.1E-19 102.7 8.9 90 102-197 6-97 (104)
88 3dmk_A DOWN syndrome cell adhe 99.6 4.2E-14 1.4E-18 130.3 17.1 141 57-198 363-527 (816)
89 1pd6_A Cardiac MYBP-C;, myosin 99.6 1.1E-14 3.8E-19 102.3 10.2 91 100-196 12-103 (104)
90 1wwc_A Protein (NT-3 growth fa 99.6 2.2E-14 7.7E-19 102.2 12.0 78 120-197 21-101 (118)
91 3bfo_A Mucosa-associated lymph 99.6 1.4E-14 4.7E-19 98.7 10.1 84 103-197 3-87 (91)
92 4fom_A Poliovirus receptor-rel 99.6 1.4E-15 4.9E-20 124.4 6.2 132 62-199 140-302 (308)
93 2edk_A Myosin-binding protein 99.6 1.9E-15 6.7E-20 104.9 5.5 90 101-197 6-99 (101)
94 1gl4_B Basement membrane-speci 99.6 1.6E-14 5.4E-19 99.5 10.0 84 107-197 14-98 (98)
95 2yd1_A Tyrosine-protein phosph 99.6 7.3E-14 2.5E-18 108.5 15.0 96 102-198 5-103 (212)
96 4hwu_A Fibroblast growth facto 99.6 7E-15 2.4E-19 100.8 8.0 84 108-199 6-89 (95)
97 2e6q_A Obscurin-like protein 1 99.6 3.5E-14 1.2E-18 101.5 11.9 90 102-198 7-106 (112)
98 1fnl_A Low affinity immunoglob 99.6 7.3E-15 2.5E-19 111.3 8.7 130 57-197 27-174 (175)
99 2v5m_A Dscam; neurobiology SPL 99.6 4.8E-15 1.6E-19 124.7 8.3 127 57-195 232-387 (388)
100 2o26_X MAST/stem cell growth f 99.6 2.4E-14 8.1E-19 116.1 12.1 140 57-198 111-289 (290)
101 2cr3_A Basic fibroblast growth 99.6 4.8E-15 1.7E-19 102.7 6.9 78 115-198 14-91 (99)
102 2cry_A KIN of IRRE-like protei 99.6 2.3E-15 8E-20 108.0 5.3 96 101-198 12-114 (122)
103 3so5_A LIG-3, leucine-rich rep 99.6 2.8E-14 9.5E-19 99.4 10.8 93 102-195 9-111 (112)
104 2e7b_A Obscurin; IG-like domai 99.6 7.9E-15 2.7E-19 101.9 7.9 92 100-198 5-96 (103)
105 3qs9_E FL cytokine receptor; i 99.6 7.1E-15 2.4E-19 130.6 9.4 137 57-198 247-415 (527)
106 2yd6_A PTPRD protein; hydrolas 99.6 7.2E-14 2.5E-18 108.6 14.1 95 102-197 5-100 (212)
107 2edh_A Obscurin; structural ge 99.6 6.1E-14 2.1E-18 99.1 12.5 89 102-198 18-106 (113)
108 2j8h_A Titin, connectin; cardi 99.6 6.6E-14 2.3E-18 106.9 13.6 95 102-197 3-98 (197)
109 1f2q_A High affinity immunoglo 99.6 1.2E-14 4E-19 110.1 9.0 132 57-199 24-173 (176)
110 2v9t_A Roundabout homolog 1; s 99.6 2.3E-14 7.7E-19 101.9 9.9 91 102-197 8-109 (117)
111 3qr2_A Basigin; CD147, EMMPRIN 99.6 2.2E-14 7.5E-19 104.9 10.0 87 100-187 18-116 (137)
112 1ry7_B FGFR-3, fibroblast grow 99.6 1.1E-14 3.6E-19 120.3 9.2 141 57-198 143-328 (334)
113 2dku_A KIAA1556 protein; beta- 99.6 3.4E-14 1.2E-18 98.7 10.3 91 101-198 6-96 (103)
114 3mtr_A N-CAM-1, NCAM-1, neural 99.5 8.1E-14 2.8E-18 108.6 13.3 94 102-198 18-113 (215)
115 3ry4_A Low affinity immunoglob 99.5 1.4E-14 4.6E-19 108.6 8.4 128 57-195 24-169 (170)
116 3v2a_R Vascular endothelial gr 99.5 4.5E-16 1.6E-20 141.9 0.0 138 57-198 569-757 (772)
117 3laf_A Deleted in colorectal c 99.5 6E-14 2.1E-18 118.3 12.5 134 59-197 143-311 (403)
118 3uto_A Twitchin; kinase, muscl 99.5 9E-14 3.1E-18 124.9 14.1 93 102-196 481-573 (573)
119 3rbg_A Cytotoxic and regulator 99.5 4.2E-14 1.5E-18 101.9 9.5 90 109-200 7-104 (124)
120 3lcy_A Titin; A-BAND, IG tande 99.5 1.8E-13 6.3E-18 104.0 13.6 94 102-197 6-99 (197)
121 3ejj_X Macrophage colony-stimu 99.5 2.1E-13 7.3E-18 109.9 14.6 140 57-197 109-281 (289)
122 2ec8_A MAST/stem cell growth f 99.5 3E-14 1E-18 125.0 10.1 140 57-197 231-411 (524)
123 1f97_A Junction adhesion molec 99.5 1E-14 3.4E-19 112.3 6.2 138 57-198 21-208 (212)
124 2dm7_A KIAA1556 protein; beta- 99.5 7.7E-14 2.6E-18 97.7 10.1 89 101-197 6-94 (108)
125 3p2t_A Leukocyte immunoglobuli 99.5 1.1E-13 3.7E-18 106.5 11.8 136 57-196 24-195 (196)
126 1e07_A Carcinoembryonic antige 99.5 9.9E-14 3.4E-18 124.6 13.3 178 7-198 407-641 (642)
127 2nzi_A Titin; IG-domain, FNIII 99.5 2E-13 6.8E-18 111.1 13.9 95 102-197 3-98 (305)
128 1qz1_A Neural cell adhesion mo 99.5 1.2E-13 4E-18 111.6 12.3 126 57-187 22-181 (291)
129 2x1w_L Vascular endothelial gr 99.5 1.5E-13 5.3E-18 107.2 12.5 141 57-198 29-208 (213)
130 2a38_A Titin; Z1Z2, structural 99.5 1.8E-13 6.2E-18 104.1 12.6 94 102-197 4-99 (194)
131 2cpc_A KIAA0657 protein; immun 99.5 1.6E-13 5.6E-18 96.7 11.4 91 102-198 9-101 (113)
132 3rjd_A High affinity immunoglo 99.5 5.8E-14 2E-18 111.6 9.8 131 57-197 21-167 (262)
133 3qs7_E FL cytokine receptor; i 99.5 2E-14 6.7E-19 124.3 7.6 137 57-198 247-415 (423)
134 4frw_A Poliovirus receptor-rel 99.5 1.3E-14 4.5E-19 111.4 5.6 82 115-196 129-210 (218)
135 3jz7_A MCAR, CAR, coxsackievir 99.5 1.9E-14 6.4E-19 110.8 5.7 79 115-198 132-213 (214)
136 1ugn_A LIR1, leukocyte immunog 99.5 1.7E-13 5.7E-18 105.6 10.8 136 57-196 24-197 (198)
137 3kld_A Contactin 4, axcam, BIG 99.5 1.2E-13 4E-18 117.1 10.7 78 115-197 216-294 (384)
138 3qs7_E FL cytokine receptor; i 99.5 2.7E-13 9.4E-18 117.2 13.0 135 57-197 159-323 (423)
139 2ny1_B T-cell surface glycopro 99.5 6.2E-14 2.1E-18 106.5 7.9 132 57-200 15-182 (184)
140 2ens_A Advanced glycosylation 99.5 2E-14 6.7E-19 98.9 4.5 84 102-196 9-94 (96)
141 2y25_A Myomesin; structural pr 99.5 1.6E-14 5.6E-19 117.9 4.7 137 57-195 26-198 (317)
142 2c5d_C AXL oncogene, tyrosine- 99.5 7.3E-13 2.5E-17 101.2 13.6 94 103-197 2-105 (195)
143 3s35_X Vascular endothelial gr 99.5 1.8E-13 6E-18 97.8 9.4 85 114-198 18-111 (122)
144 2d3v_A Leukocyte immunoglobuli 99.5 1E-13 3.4E-18 106.8 8.5 126 57-186 24-181 (196)
145 1ry7_B FGFR-3, fibroblast grow 99.5 1.3E-14 4.6E-19 119.7 3.7 141 57-197 28-216 (334)
146 3r4d_A CEA-related cell adhesi 99.5 3.1E-13 1.1E-17 104.0 11.1 79 116-198 122-201 (208)
147 3dmk_A DOWN syndrome cell adhe 99.5 7.8E-14 2.7E-18 128.5 8.8 134 57-196 639-808 (816)
148 2fbo_J V1V2;, variable region- 99.5 6.2E-14 2.1E-18 110.8 7.0 81 115-195 147-250 (250)
149 1wio_A CD4, T-cell surface gly 99.5 8E-14 2.7E-18 116.9 8.0 140 57-196 116-292 (363)
150 1e07_A Carcinoembryonic antige 99.5 2.3E-13 8E-18 122.1 11.4 133 57-196 401-556 (642)
151 3oq3_B IFN-alpha/beta binding 99.5 3E-13 1E-17 112.2 11.0 138 57-196 148-329 (329)
152 2jll_A NCAM2, neural cell adhe 99.5 9.5E-13 3.3E-17 110.6 14.3 92 103-197 1-99 (389)
153 2y23_A Myomesin; structural pr 99.5 4.4E-13 1.5E-17 109.1 11.8 136 57-192 21-197 (312)
154 2eo1_A OBSCN protein, cDNA FLJ 99.5 4E-13 1.4E-17 93.0 9.8 80 115-200 22-101 (102)
155 1sy6_A T-cell surface glycopro 99.5 5E-14 1.7E-18 110.0 5.8 74 117-195 126-202 (204)
156 3o4o_C Interleukin-1 receptor 99.5 1.2E-13 4.2E-18 114.3 8.4 148 47-197 18-220 (339)
157 1jbj_A CD3 epsilon and gamma e 99.5 1.5E-13 5.3E-18 105.4 8.3 60 117-187 120-179 (186)
158 3ojm_B Fibroblast growth facto 99.5 1.7E-13 5.9E-18 106.7 8.5 95 102-197 14-112 (231)
159 2gi7_A GPVI protein; IG-like d 99.5 9.3E-14 3.2E-18 106.2 6.8 120 57-185 27-168 (184)
160 3u83_A Poliovirus receptor-rel 99.5 9.9E-14 3.4E-18 114.2 7.5 136 57-199 155-322 (331)
161 1nbq_A JAM, junctional adhesio 99.5 7E-15 2.4E-19 113.0 0.3 131 57-191 24-201 (209)
162 2wim_A N-CAM 2, NCAM2, neural 99.4 4E-13 1.4E-17 108.4 10.4 134 57-196 24-190 (291)
163 2ec8_A MAST/stem cell growth f 99.4 1.7E-12 6E-17 113.7 14.6 140 57-198 134-310 (524)
164 3p3y_A Neurofascin; IG domains 99.4 1.1E-12 3.6E-17 110.5 12.5 79 115-197 233-311 (404)
165 1epf_A NCAM, protein (neural c 99.4 3.8E-12 1.3E-16 96.6 13.5 94 103-197 2-99 (191)
166 3mjg_X Beta-type platelet-deri 99.4 1.2E-12 3.9E-17 105.9 10.9 96 103-199 181-280 (289)
167 4f80_A Butyrophilin subfamily 99.4 2.6E-13 8.9E-18 106.5 6.8 84 115-198 129-214 (226)
168 1uct_A Immunoglobulin alpha FC 99.4 5.1E-13 1.7E-17 105.3 8.4 133 57-197 28-198 (218)
169 2va4_A NCAM2, N-CAM 2, neural 99.4 1.4E-12 4.9E-17 98.7 10.6 91 103-196 2-93 (192)
170 1z9m_A GAPA225; nectin-like, I 99.4 2.3E-12 8E-17 95.1 11.3 91 106-199 41-140 (145)
171 4dep_C Interleukin-1 receptor 99.4 1.1E-13 3.8E-18 115.0 4.6 136 62-197 150-333 (349)
172 2ocw_A Polymeric-immunoglobuli 99.4 2.2E-12 7.6E-17 114.3 13.0 88 110-198 449-547 (585)
173 3vh8_G Killer cell immunoglobu 99.4 8.5E-13 2.9E-17 108.5 9.6 149 34-186 11-199 (316)
174 3rbs_A Myomesin-1; immunoglobu 99.4 1.1E-12 3.7E-17 102.7 9.4 87 103-193 3-91 (207)
175 3oq3_B IFN-alpha/beta binding 99.4 1.9E-13 6.5E-18 113.3 5.3 128 65-198 66-225 (329)
176 3grw_A Fibroblast growth facto 99.4 9.3E-13 3.2E-17 103.6 8.8 96 102-197 10-108 (241)
177 2oz4_A Intercellular adhesion 99.4 4.3E-13 1.5E-17 107.7 6.6 121 59-198 120-265 (265)
178 2id5_A Lingo-1, leucine rich r 99.4 6.5E-13 2.2E-17 115.6 8.3 89 103-196 384-476 (477)
179 4i0k_A CD276 antigen; immunogl 99.4 4.5E-12 1.6E-16 98.5 12.3 84 115-198 121-207 (222)
180 2iep_A Muscle-specific kinase 99.4 1.8E-12 6E-17 98.4 9.6 91 102-196 6-98 (192)
181 2v5y_A Receptor-type tyrosine- 99.4 4.2E-12 1.4E-16 116.2 13.8 139 57-198 96-261 (731)
182 2rcj_C Light chain; immunoglob 99.4 4.1E-12 1.4E-16 111.3 13.2 136 57-195 134-314 (523)
183 1rhf_A Tyrosine-protein kinase 99.4 2.1E-12 7.1E-17 97.4 9.3 94 103-197 2-97 (182)
184 3o4o_C Interleukin-1 receptor 99.4 6E-14 2E-18 116.2 0.6 134 61-197 149-335 (339)
185 4dkd_C Macrophage colony-stimu 99.4 3E-12 1E-16 103.3 10.7 95 103-198 186-282 (292)
186 1bih_A Hemolin; insect immunit 99.4 1.5E-12 5.2E-17 109.4 8.7 84 111-196 220-306 (395)
187 1vca_A VCAM-D1,2, human vascul 99.4 1E-11 3.4E-16 96.6 12.3 86 108-198 5-91 (202)
188 1oll_A NK receptor; immune sys 99.4 3.7E-12 1.3E-16 97.5 9.7 131 57-196 23-187 (188)
189 3bp6_B Programmed cell death 1 99.3 1.3E-12 4.5E-17 100.4 7.0 81 115-198 114-194 (202)
190 2wng_A Tyrosine-protein phosph 99.3 1.5E-12 5E-17 107.5 7.8 73 116-188 232-310 (327)
191 3mj8_L Stimulatory hamster ant 99.3 3.7E-12 1.2E-16 98.6 9.5 77 116-192 126-208 (213)
192 3sbw_C Programmed cell death 1 99.3 5.3E-12 1.8E-16 98.0 10.5 83 115-197 127-211 (222)
193 2v44_A NCAM2, neural cell adhe 99.3 1.6E-11 5.5E-16 93.1 12.9 89 106-197 5-95 (189)
194 2v5t_A NCAM2, N-CAM 2, neural 99.3 5.5E-12 1.9E-16 95.2 10.2 80 103-187 2-83 (189)
195 3qs9_E FL cytokine receptor; i 99.3 4.5E-12 1.5E-16 112.6 11.2 135 57-197 159-323 (527)
196 3rjd_A High affinity immunoglo 99.3 2.2E-12 7.5E-17 102.4 7.9 120 57-187 102-249 (262)
197 3zyj_A Leucine-rich repeat-con 99.3 2.7E-12 9.4E-17 110.9 9.1 92 102-199 340-435 (440)
198 1qgc_4 Protein (immunoglobulin 99.3 3.5E-12 1.2E-16 108.9 9.6 128 57-185 136-321 (438)
199 1itb_B Type 1 interleukin-1 re 99.3 3.7E-12 1.2E-16 104.2 9.1 126 57-187 25-189 (315)
200 2pet_A Lutheran blood group gl 99.3 2.5E-12 8.4E-17 100.4 7.7 91 104-195 119-229 (231)
201 1z7z_I Intercellular adhesion 99.3 1.8E-12 6E-17 111.4 7.3 123 57-186 19-167 (450)
202 1hng_A CD2; T lymphocyte adhes 99.3 9.9E-13 3.4E-17 100.2 4.9 68 117-196 108-175 (176)
203 4fa8_A Secreted protein BARF1; 99.3 2.3E-12 7.9E-17 100.8 6.9 83 115-198 4-106 (203)
204 2wv3_A Neuroplastin; igcam, me 99.3 1.1E-11 3.6E-16 94.4 10.4 87 103-198 3-92 (190)
205 1cs6_A Axonin-1; neural cell a 99.3 4.1E-12 1.4E-16 106.6 8.6 88 103-197 206-293 (382)
206 3bp6_B Programmed cell death 1 99.3 1.7E-11 5.8E-16 94.1 11.1 89 110-198 8-104 (202)
207 3d9a_L Light chain of hyhel10 99.3 5.6E-12 1.9E-16 97.5 8.4 77 117-193 125-209 (213)
208 4dep_C Interleukin-1 receptor 99.3 3.3E-12 1.1E-16 106.0 7.4 78 115-197 131-217 (349)
209 2ocw_A Polymeric-immunoglobuli 99.3 1.5E-11 5.2E-16 108.9 11.9 96 102-198 111-222 (585)
210 2vr9_A Roundabout 1, ROBO; imm 99.3 9.5E-12 3.3E-16 96.3 8.3 91 101-196 7-105 (217)
211 2rcj_C Light chain; immunoglob 99.3 1.8E-11 6.1E-16 107.2 11.0 137 57-194 239-417 (523)
212 1vca_A VCAM-D1,2, human vascul 99.3 1.2E-11 4.2E-16 96.1 8.2 141 56-198 20-198 (202)
213 3zyi_A Leucine-rich repeat-con 99.3 3.1E-12 1.1E-16 111.0 5.2 91 102-199 351-445 (452)
214 2v5m_A Dscam; neurobiology SPL 99.3 1E-11 3.5E-16 104.2 8.1 92 102-196 2-101 (388)
215 2o26_X MAST/stem cell growth f 99.3 3.4E-12 1.2E-16 103.3 5.0 130 57-196 32-182 (290)
216 1f97_A Junction adhesion molec 99.3 1.7E-11 5.9E-16 94.0 8.7 88 105-198 3-104 (212)
217 3k0w_A Mucosa-associated lymph 99.2 1.8E-11 6.1E-16 95.6 8.5 86 101-197 16-102 (218)
218 2wng_A Tyrosine-protein phosph 99.2 1E-10 3.5E-15 96.4 13.3 72 115-186 128-205 (327)
219 2v9r_A Roundabout homolog 1; p 99.2 4.5E-11 1.5E-15 91.8 9.7 91 101-196 7-108 (212)
220 2xot_A Amphoterin-induced prot 99.2 1.7E-11 5.7E-16 103.6 7.8 81 111-198 254-338 (361)
221 1z7z_I Intercellular adhesion 99.2 9.9E-11 3.4E-15 100.4 12.4 136 57-197 106-282 (450)
222 1pko_A Myelin oligodendrocyte 99.2 2.1E-10 7.2E-15 83.7 12.4 90 109-198 11-122 (139)
223 1lk3_L 9D7 light chain; antige 99.2 4.9E-11 1.7E-15 92.2 9.3 72 117-188 124-203 (210)
224 1nkr_A P58-CL42 KIR; inhibitor 99.2 4.9E-11 1.7E-15 92.0 9.1 67 115-184 118-184 (201)
225 3p2t_A Leukocyte immunoglobuli 99.2 2E-11 6.9E-16 93.6 6.8 89 103-196 5-95 (196)
226 1eaj_A Coxsackie virus and ade 99.2 7.6E-11 2.6E-15 83.3 9.3 84 115-198 16-126 (126)
227 4dkd_C Macrophage colony-stimu 99.2 3.8E-11 1.3E-15 96.8 8.5 131 57-197 24-181 (292)
228 3nl4_L Antigen binding fragmen 99.2 5.8E-11 2E-15 91.7 9.1 90 104-195 2-108 (213)
229 1hng_A CD2; T lymphocyte adhes 99.2 2.1E-11 7.3E-16 92.7 6.5 80 115-198 7-100 (176)
230 1jhl_L IGG1-kappa D11.15 FV (l 99.2 1.4E-10 4.9E-15 81.1 10.2 89 106-196 4-107 (108)
231 3ejj_X Macrophage colony-stimu 99.2 8.3E-11 2.8E-15 94.6 10.2 131 57-196 24-180 (289)
232 3udw_C Poliovirus receptor; PV 99.2 9.5E-11 3.3E-15 82.2 9.3 89 109-198 6-117 (118)
233 1gsm_A Madcam-1, mucosal addre 99.2 1.8E-10 6.2E-15 90.9 11.7 88 104-198 7-96 (210)
234 2r15_A Myomesin-1; sarcomeric 99.2 1E-10 3.4E-15 89.9 9.9 79 117-196 15-94 (212)
235 3mj6_A Junctional adhesion mol 99.2 8.9E-12 3E-16 99.6 4.0 82 115-196 129-236 (268)
236 3mj8_L Stimulatory hamster ant 99.2 7.6E-11 2.6E-15 91.1 9.0 83 112-196 9-108 (213)
237 3q0h_A T cell immunoreceptor w 99.2 1.5E-10 5E-15 82.7 9.7 86 108-198 8-109 (117)
238 3s96_B 3B5H10 FAB light chain; 99.2 3.9E-11 1.3E-15 92.9 7.1 75 117-191 134-214 (218)
239 1p6f_A NKP46, natural cytotoxi 99.2 1.2E-10 4.2E-15 93.3 10.2 132 57-197 26-191 (242)
240 3tv3_L PGT128 light chain, IG 99.2 6.8E-11 2.3E-15 91.3 8.2 89 103-192 111-206 (211)
241 2c1o_A IGK-C protein; FAB frag 99.2 1.1E-10 3.7E-15 92.9 9.4 71 117-187 167-245 (254)
242 1wio_A CD4, T-cell surface gly 99.2 2.3E-11 7.8E-16 101.8 5.7 129 57-197 14-178 (363)
243 3pv7_A B7-H6, IG-like domain-c 99.2 8.8E-11 3E-15 93.0 8.7 82 115-196 129-225 (248)
244 1q0x_L FAB 9B1, light chain; a 99.2 1.7E-10 5.8E-15 89.1 10.1 75 117-191 128-209 (212)
245 3khq_A B-cell antigen receptor 99.2 1.1E-10 3.6E-15 85.5 8.3 89 105-197 19-117 (133)
246 3sgj_C Human FCG3A receptor; r 99.2 6.7E-11 2.3E-15 92.0 7.5 80 103-196 7-87 (204)
247 3s96_B 3B5H10 FAB light chain; 99.1 2.2E-10 7.5E-15 88.6 10.1 89 105-196 3-115 (218)
248 4fmk_A Poliovirus receptor-rel 99.1 8E-11 2.7E-15 90.4 7.4 80 115-196 132-216 (225)
249 4dzb_B Vbeta2 (MAIT T cell rec 99.1 2.7E-10 9.3E-15 90.1 10.6 79 106-185 4-101 (246)
250 3d9a_L Light chain of hyhel10 99.1 2E-10 7E-15 88.6 9.6 88 107-196 5-107 (213)
251 2d3v_A Leukocyte immunoglobuli 99.1 6E-11 2E-15 91.1 6.3 91 102-197 4-96 (196)
252 3sob_L Antibody light chain; b 99.1 1.9E-10 6.4E-15 90.0 9.2 77 117-193 148-232 (237)
253 3r06_A Anti-mouse CD3epsilon a 99.1 2.8E-10 9.7E-15 87.8 9.9 73 116-188 124-204 (213)
254 3esu_F Antibody 14B7* light ch 99.1 6.8E-11 2.3E-15 93.8 6.4 76 106-182 134-231 (250)
255 3nl4_L Antigen binding fragmen 99.1 1.9E-10 6.5E-15 88.8 8.7 60 116-181 126-198 (213)
256 1nfd_E H57 FAB; complex (immun 99.1 1.1E-11 3.7E-16 96.0 1.4 72 117-188 126-203 (212)
257 3r06_A Anti-mouse CD3epsilon a 99.1 2.7E-10 9.4E-15 87.9 9.3 90 104-195 2-106 (213)
258 1nbq_A JAM, junctional adhesio 99.1 5E-11 1.7E-15 91.2 5.0 89 103-197 4-106 (209)
259 3jz7_A MCAR, CAR, coxsackievir 99.1 2.5E-10 8.7E-15 87.3 8.5 85 114-198 10-121 (214)
260 3r08_E T-cell surface glycopro 99.1 1.8E-11 6.3E-16 82.4 1.8 60 110-182 6-66 (82)
261 2gi7_A GPVI protein; IG-like d 99.1 1.2E-10 3.9E-15 88.8 6.5 81 102-196 7-89 (184)
262 1fnl_A Low affinity immunoglob 99.1 2.1E-10 7.2E-15 86.4 7.8 81 102-196 6-87 (175)
263 3auv_A SC-DSFV derived from th 99.1 5.4E-10 1.8E-14 90.4 10.7 77 106-183 137-235 (276)
264 3u83_A Poliovirus receptor-rel 99.1 4.9E-10 1.7E-14 91.9 10.3 76 115-196 143-229 (331)
265 1jbj_A CD3 epsilon and gamma e 99.1 8.5E-11 2.9E-15 89.9 5.4 69 115-195 10-79 (186)
266 1qgc_4 Protein (immunoglobulin 99.1 2E-10 7E-15 97.9 8.1 74 117-190 129-210 (438)
267 2qsq_A Carcinoembryonic antige 99.1 3E-10 1E-14 80.7 7.6 79 115-197 11-109 (111)
268 2ghw_B Anti-SARS SCFV antibody 99.1 5.8E-10 2E-14 88.2 10.0 89 106-196 138-241 (247)
269 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.1 6.2E-10 2.1E-14 89.0 10.1 92 104-197 138-248 (256)
270 1lk3_L 9D7 light chain; antige 99.1 4.9E-10 1.7E-14 86.5 9.1 85 110-196 7-106 (210)
271 2if7_A SLAM family member 6; N 99.1 2.4E-10 8.4E-15 87.9 7.3 80 115-198 9-107 (193)
272 1b6u_A KIR2DL3, P58 killer cel 99.1 1.6E-10 5.3E-15 93.6 6.4 80 115-197 117-201 (257)
273 4f80_A Butyrophilin subfamily 99.1 1.9E-09 6.5E-14 84.2 12.4 90 109-198 9-120 (226)
274 2if7_A SLAM family member 6; N 99.1 8.2E-10 2.8E-14 84.9 9.9 62 118-191 122-186 (193)
275 2ifg_A High affinity nerve gro 99.1 5.9E-11 2E-15 99.2 3.7 91 102-196 157-248 (347)
276 1ugn_A LIR1, leukocyte immunog 99.1 7.9E-11 2.7E-15 90.4 4.0 91 102-197 4-97 (198)
277 3eow_R Poliovirus receptor; im 99.1 4.3E-10 1.5E-14 87.5 8.3 92 103-196 116-211 (221)
278 1xau_A B- and T-lymphocyte att 99.1 1.5E-09 5.1E-14 76.4 10.0 87 111-197 21-116 (122)
279 4dzb_B Vbeta2 (MAIT T cell rec 99.1 3.2E-10 1.1E-14 89.6 7.7 72 116-187 137-221 (246)
280 3nfj_J T cell receptor beta ch 99.1 1.4E-09 4.9E-14 85.9 11.3 77 107-184 5-97 (245)
281 1moe_A Anti-CEA MAB T84.66; an 99.0 3.8E-10 1.3E-14 88.8 7.6 90 106-197 4-112 (240)
282 3tv3_L PGT128 light chain, IG 99.0 5E-10 1.7E-14 86.4 8.2 79 115-196 11-105 (211)
283 1f3r_B FV antibody fragment; I 99.0 1.1E-09 3.7E-14 87.6 10.4 77 108-185 5-102 (257)
284 1uct_A Immunoglobulin alpha FC 99.0 1.9E-10 6.4E-15 90.5 5.7 89 103-196 9-101 (218)
285 3sob_L Antibody light chain; b 99.0 1.2E-09 4.1E-14 85.3 10.3 90 104-195 25-129 (237)
286 2wqr_A IG epsilon chain C regi 99.0 6.4E-11 2.2E-15 97.7 3.1 130 56-187 28-204 (323)
287 1dr9_A B7-1 (CD80), T lymphocy 99.0 7.7E-10 2.6E-14 84.7 9.0 76 117-193 119-197 (201)
288 2ywz_A NEW antigen receptor va 99.0 1.7E-09 5.9E-14 76.1 10.1 77 106-183 3-88 (111)
289 3ux9_B SCFV antibody; five hel 99.0 1E-09 3.5E-14 87.4 9.9 74 110-184 141-236 (256)
290 3r4d_A CEA-related cell adhesi 99.0 8.3E-10 2.8E-14 84.6 9.0 80 115-198 10-109 (208)
291 3s97_C Contactin-1; carbonic a 99.0 1.3E-10 4.5E-15 88.2 4.4 83 104-189 8-94 (201)
292 2fbo_J V1V2;, variable region- 99.0 6.6E-10 2.2E-14 87.4 8.5 87 110-198 8-132 (250)
293 3vh8_G Killer cell immunoglobu 99.0 1E-10 3.5E-15 96.0 4.0 80 115-197 229-313 (316)
294 2q20_A VK1 O18/O8 germline lig 99.0 1.4E-09 4.8E-14 76.2 9.3 77 105-183 5-95 (109)
295 1nkr_A P58-CL42 KIR; inhibitor 99.0 3.4E-10 1.1E-14 87.3 6.5 91 103-196 8-103 (201)
296 1f2q_A High affinity immunoglo 99.0 2E-10 7E-15 86.4 5.1 76 103-190 4-80 (176)
297 2znx_A SCFV; fluorotryptohpan, 99.0 1.1E-09 3.9E-14 86.7 9.7 77 106-183 125-222 (242)
298 3sbw_C Programmed cell death 1 99.0 1.7E-09 5.6E-14 83.7 10.3 85 114-199 11-117 (222)
299 2c1o_A IGK-C protein; FAB frag 99.0 1.1E-09 3.6E-14 87.0 9.4 92 103-196 38-149 (254)
300 3pv7_A B7-H6, IG-like domain-c 99.0 1.8E-10 6.1E-15 91.3 4.8 91 107-198 7-119 (248)
301 1mqk_L Antibody 7E2 FV fragmen 99.0 1.9E-09 6.4E-14 77.2 9.7 89 107-197 5-109 (120)
302 2pet_A Lutheran blood group gl 99.0 1.4E-10 4.7E-15 90.3 4.0 85 109-198 6-115 (231)
303 1xt5_A Variable region-contain 99.0 1E-09 3.5E-14 79.2 8.3 83 114-198 14-134 (135)
304 1q0x_L FAB 9B1, light chain; a 99.0 1.3E-09 4.4E-14 84.1 9.3 84 110-195 7-108 (212)
305 1moe_A Anti-CEA MAB T84.66; an 99.0 1.5E-09 5.2E-14 85.3 9.8 77 106-183 122-220 (240)
306 2p1y_A Bispecific alpha/beta T 99.0 4.5E-10 1.5E-14 88.2 6.8 77 107-184 131-222 (238)
307 1f3r_B FV antibody fragment; I 99.0 1.8E-10 6.1E-15 92.3 4.2 82 115-197 150-245 (257)
308 4fom_A Poliovirus receptor-rel 99.0 1.1E-10 3.7E-15 95.2 3.0 77 115-191 125-202 (308)
309 1h5b_A Murine T cell receptor 99.0 1.3E-09 4.3E-14 76.9 8.1 77 107-185 5-95 (113)
310 2znx_A SCFV; fluorotryptohpan, 99.0 1.8E-09 6.1E-14 85.6 9.9 90 106-197 4-108 (242)
311 2ghw_B Anti-SARS SCFV antibody 99.0 1.6E-09 5.4E-14 85.7 9.5 89 108-197 7-119 (247)
312 3esu_F Antibody 14B7* light ch 99.0 1.6E-09 5.6E-14 85.7 9.6 90 105-196 6-110 (250)
313 1c1e_H Catalytic antibody 1E9 99.0 1.6E-09 5.6E-14 84.0 9.4 89 108-197 5-119 (219)
314 3v2a_R Vascular endothelial gr 99.0 4.4E-09 1.5E-13 95.6 13.6 84 115-198 235-327 (772)
315 2x1w_L Vascular endothelial gr 99.0 2.7E-10 9.2E-15 88.6 4.8 76 115-195 18-99 (213)
316 3umt_A SCFV heavy chain and li 99.0 1.4E-09 4.7E-14 86.8 9.1 94 103-198 138-246 (256)
317 3bkj_L WO2 IGG2A FAB fragment 99.0 8.2E-10 2.8E-14 87.9 7.7 71 117-187 163-241 (252)
318 2rgs_A I, IG gamma-2B heavy ch 99.0 7.2E-10 2.5E-14 86.7 7.1 69 118-186 131-205 (218)
319 3auv_A SC-DSFV derived from th 99.0 1.2E-09 4.1E-14 88.3 8.6 92 103-196 12-118 (276)
320 1q9r_B S25-2 FAB (IGG1K) heavy 99.0 7.4E-10 2.5E-14 86.3 7.0 76 116-194 139-220 (222)
321 3r0n_A Poliovirus receptor-rel 99.0 1.8E-09 6.2E-14 77.4 8.5 87 108-195 7-128 (128)
322 4hwn_A FC receptor-like A; FCR 99.0 1.1E-09 3.8E-14 77.0 7.2 86 102-198 7-100 (108)
323 1ccz_A Protein (CD58); LFA-3, 99.0 5.5E-10 1.9E-14 84.6 6.0 78 115-198 6-95 (171)
324 1igt_B IGG2A intact antibody - 99.0 3.1E-10 1E-14 97.5 5.1 73 116-188 252-332 (444)
325 2p1y_A Bispecific alpha/beta T 99.0 1.1E-09 3.6E-14 86.1 7.8 78 106-185 3-97 (238)
326 1oll_A NK receptor; immune sys 99.0 1.4E-09 4.7E-14 83.0 8.2 88 103-196 4-94 (188)
327 1hnf_A CD2; T lymphocyte adhes 99.0 5E-10 1.7E-14 86.1 5.7 80 114-197 9-104 (182)
328 4fqp_A Poliovirus receptor; im 99.0 1.2E-09 4.2E-14 89.3 8.4 86 102-190 116-206 (313)
329 4gos_A V-SET domain-containing 99.0 3E-09 1E-13 76.7 9.4 83 115-197 16-120 (125)
330 4ei6_B Vbeta16 XV19 type II na 99.0 2.4E-09 8.3E-14 84.5 9.7 91 104-196 3-115 (245)
331 2e27_L Anti-ciguatoxin antibod 99.0 3.5E-09 1.2E-13 75.7 9.6 76 106-183 6-95 (119)
332 3bqu_C 3H6 FAB light chain; be 99.0 4.3E-10 1.5E-14 88.1 5.1 70 117-186 147-224 (233)
333 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 1.6E-09 5.3E-14 86.7 8.5 93 104-197 4-116 (256)
334 2vol_A Murine IGG FC; FC, zinc 99.0 2.7E-09 9.2E-14 82.7 9.5 69 118-186 123-197 (207)
335 3bkj_L WO2 IGG2A FAB fragment 99.0 2.9E-09 9.8E-14 84.7 9.8 92 103-196 34-145 (252)
336 1nqb_A Single-chain antibody f 99.0 2.9E-09 1E-13 85.3 9.8 92 104-197 122-233 (256)
337 1i8k_A Epidermal growth factor 99.0 2.9E-09 1E-13 74.3 8.6 76 107-184 5-94 (107)
338 3juy_B 3B3 single chain varian 99.0 2.6E-09 8.8E-14 85.2 9.4 91 103-195 149-255 (256)
339 2wqr_A IG epsilon chain C regi 99.0 1.8E-09 6.1E-14 89.0 8.6 69 118-186 233-309 (323)
340 1qfw_M FV, antibody (anti beta 99.0 1.9E-09 6.4E-14 75.4 7.5 76 107-184 5-94 (108)
341 2j6e_L IGM, FAB light chain; a 99.0 3.2E-10 1.1E-14 88.8 3.8 75 117-191 148-229 (234)
342 1qok_A MFE-23 recombinant anti 99.0 2.5E-09 8.5E-14 86.8 9.2 86 109-197 168-268 (282)
343 2coq_A NEW antigen receptor va 99.0 2.7E-09 9.2E-14 74.7 8.1 75 107-182 4-87 (108)
344 1svz_A Immunoglobulin;, single 98.9 2.6E-09 8.8E-14 84.5 8.9 90 106-197 4-113 (247)
345 1c1e_H Catalytic antibody 1E9 98.9 9.3E-10 3.2E-14 85.4 6.2 72 116-194 136-217 (219)
346 3gkz_A Anti-methamphetamine si 98.9 7.3E-09 2.5E-13 82.5 11.4 94 103-197 8-126 (257)
347 1zox_A CLM-1; IG-superfamily, 98.9 1.3E-08 4.3E-13 71.5 11.3 89 109-198 7-111 (113)
348 3ry4_A Low affinity immunoglob 98.9 1.6E-09 5.5E-14 80.6 7.0 80 103-196 4-84 (170)
349 1hnf_A CD2; T lymphocyte adhes 98.9 1E-09 3.4E-14 84.4 5.9 66 118-195 114-179 (182)
350 1dr9_A B7-1 (CD80), T lymphocy 98.9 6.5E-10 2.2E-14 85.1 4.7 82 115-198 5-107 (201)
351 4gjt_B Poliovirus receptor-rel 98.9 2.2E-09 7.7E-14 76.9 7.2 89 110-199 7-119 (123)
352 3omz_A Human vdelta1 gamma del 98.9 1.6E-09 5.4E-14 86.6 6.9 94 103-197 2-118 (259)
353 1nqb_A Single-chain antibody f 98.9 4.3E-09 1.5E-13 84.3 9.5 77 108-185 5-103 (256)
354 2vol_A Murine IGG FC; FC, zinc 98.9 6.1E-10 2.1E-14 86.4 4.3 84 104-187 3-94 (207)
355 1za6_B IGG heavy chain; immuno 98.9 1.9E-09 6.3E-14 89.8 7.3 68 116-190 132-210 (344)
356 3juy_B 3B3 single chain varian 98.9 5.1E-09 1.7E-13 83.4 9.6 94 103-197 6-133 (256)
357 1hzh_H IGG, immunoglobulin hea 98.9 2.7E-09 9.1E-14 92.0 8.4 70 118-187 369-444 (457)
358 3b5h_A Cervical EMMPRIN, HAB18 98.9 2.3E-09 8E-14 80.7 7.0 72 115-197 9-82 (184)
359 1za6_B IGG heavy chain; immuno 98.9 3.5E-09 1.2E-13 88.1 8.7 88 108-196 5-114 (344)
360 3mjg_X Beta-type platelet-deri 98.9 7.6E-10 2.6E-14 89.2 4.5 74 115-196 11-89 (289)
361 1qok_A MFE-23 recombinant anti 98.9 1E-08 3.4E-13 83.2 11.1 79 106-185 29-129 (282)
362 2gjj_A A21 single-chain antibo 98.9 4.1E-09 1.4E-13 84.9 8.7 93 103-197 5-118 (264)
363 1nfd_E H57 FAB; complex (immun 98.9 1.7E-09 5.8E-14 83.4 6.2 72 110-183 6-91 (212)
364 2vsd_A CHIR AB1; immune system 98.9 7.8E-10 2.7E-14 77.3 3.8 88 103-197 5-96 (105)
365 2ny1_B T-cell surface glycopro 98.9 3.5E-10 1.2E-14 85.5 2.2 75 114-188 5-95 (184)
366 2xzc_L FAB A.17 light chain; i 98.9 3.2E-09 1.1E-13 82.2 7.6 77 117-193 127-211 (216)
367 3q5y_A TCR N15 beta; IG, T cel 98.9 7.6E-09 2.6E-13 81.4 9.9 75 106-182 5-96 (240)
368 1op3_H FAB 2G12, heavy chain; 98.9 6.9E-09 2.4E-13 81.3 9.6 77 108-185 5-103 (225)
369 2or8_A Hepatitis A virus cellu 98.9 1.2E-09 4.2E-14 76.8 4.7 85 115-199 8-113 (116)
370 4ffy_L DENV1-E111 single chain 98.9 6.6E-09 2.2E-13 74.8 8.6 91 106-198 4-113 (126)
371 2oz4_A Intercellular adhesion 98.9 7.8E-09 2.7E-13 82.6 9.9 76 115-197 14-97 (265)
372 2w59_A IGY FCU3-4; immunoglobu 98.9 7.2E-09 2.4E-13 81.8 9.5 69 119-187 133-218 (231)
373 3d9a_H Heavy chain of hyhel10 98.9 3.9E-09 1.3E-13 81.5 7.7 76 108-184 5-101 (210)
374 2oyp_A Hepatitis A virus cellu 98.9 2.7E-09 9.3E-14 73.9 6.2 82 115-196 5-107 (109)
375 1pz5_B Heavy chain of FAB (SYA 98.9 2.8E-09 9.5E-14 82.9 6.8 70 116-192 137-216 (220)
376 1ncn_A T lymphocyte activation 98.9 7.1E-09 2.4E-13 72.4 8.2 80 115-197 5-110 (110)
377 3uzq_A Anti-dengue MAB 4E11; d 98.9 2.9E-09 9.8E-14 84.7 6.9 92 104-197 134-244 (253)
378 3moq_A NEW antigen receptor va 98.9 2E-08 6.9E-13 72.7 10.8 78 107-185 4-90 (126)
379 3pl6_D MBP peptide / T-cell re 98.9 4.7E-09 1.6E-13 84.1 8.1 91 104-196 27-137 (268)
380 2wbj_D OB TCR; transmembrane, 98.9 6E-09 2.1E-13 84.3 8.8 80 103-183 24-122 (279)
381 4fmk_A Poliovirus receptor-rel 98.9 2.9E-09 9.8E-14 81.6 6.4 80 110-190 8-112 (225)
382 1i3g_L Antibody FV fragment; a 98.9 8.9E-09 3.1E-13 72.3 8.4 77 106-184 7-97 (111)
383 2xzc_L FAB A.17 light chain; i 98.9 4.2E-09 1.4E-13 81.5 7.3 85 110-196 7-109 (216)
384 1igy_B IGG1 intact antibody MA 98.9 4.3E-09 1.5E-13 90.1 8.0 70 117-186 349-424 (434)
385 1l6x_A Immunoglobulin gamma-1 98.9 1.1E-08 3.9E-13 79.0 9.5 69 118-186 123-197 (207)
386 3uzq_A Anti-dengue MAB 4E11; d 98.9 7.1E-09 2.4E-13 82.4 8.6 91 106-197 4-117 (253)
387 4frw_A Poliovirus receptor-rel 98.9 3.4E-09 1.2E-13 80.8 6.4 81 109-190 5-108 (218)
388 3d9a_H Heavy chain of hyhel10 98.9 3.7E-09 1.3E-13 81.6 6.7 76 115-191 129-208 (210)
389 1neu_A Myelin P0 protein; stru 98.9 7.8E-09 2.7E-13 73.3 7.8 88 110-198 6-120 (124)
390 2zg1_A Sialic acid-binding IG- 98.9 2E-09 7E-14 82.9 5.1 72 116-194 135-210 (214)
391 3ux9_B SCFV antibody; five hel 98.9 7E-09 2.4E-13 82.4 8.3 87 109-197 8-113 (256)
392 1sq2_N Novel antigen receptor; 98.8 1.4E-08 4.8E-13 71.7 8.8 75 108-183 5-88 (113)
393 1hxm_B Gamma-delta T-cell rece 98.8 2.3E-08 7.9E-13 79.2 10.9 80 104-184 2-103 (242)
394 3mj6_A Junctional adhesion mol 98.8 2.7E-09 9.3E-14 85.0 5.5 90 106-196 8-121 (268)
395 2d9c_A Signal-regulatory prote 98.8 3.9E-08 1.3E-12 71.4 11.2 93 106-199 11-123 (136)
396 1dee_B IGM RF 2A2; FAB-IBP com 98.8 2.3E-08 8E-13 78.2 10.6 70 116-191 138-221 (223)
397 2zg1_A Sialic acid-binding IG- 98.8 1.3E-08 4.5E-13 78.2 9.0 90 107-197 4-122 (214)
398 2ptt_A CD48 antigen; CD244, CD 98.8 4.7E-09 1.6E-13 73.4 5.8 81 114-198 13-109 (110)
399 3bae_H WO2 IGG2A FAB fragment 98.8 9.6E-09 3.3E-13 80.6 8.3 76 109-185 6-104 (228)
400 1q9r_B S25-2 FAB (IGG1K) heavy 98.8 9.2E-09 3.1E-13 80.0 8.0 77 108-185 5-105 (222)
401 2rgs_A I, IG gamma-2B heavy ch 98.8 3E-09 1E-13 83.1 5.3 85 103-187 9-102 (218)
402 1x9q_A SCFV, 4M5.3 anti-fluore 98.8 5.1E-09 1.7E-13 84.2 6.7 81 103-185 15-114 (268)
403 2j6e_L IGM, FAB light chain; a 98.8 3.5E-09 1.2E-13 82.8 5.5 84 110-195 26-128 (234)
404 2d9q_B Granulocyte colony-stim 98.8 3.7E-09 1.3E-13 87.0 5.9 83 111-197 8-97 (313)
405 3rrq_A Protein PD-1, programme 98.8 7.2E-09 2.5E-13 75.1 6.6 89 108-197 6-115 (129)
406 2dru_A Chimera of CD48 antigen 98.8 1.2E-08 4E-13 77.9 8.1 64 117-193 113-177 (180)
407 1dn0_B IGM-kappa cold agglutin 98.8 3.2E-08 1.1E-12 78.0 10.9 75 116-196 137-226 (232)
408 1j05_L T84.66 antibody, anti-C 98.8 1.1E-08 3.6E-13 71.8 7.3 74 108-183 6-97 (111)
409 1igy_B IGG1 intact antibody MA 98.8 8.9E-09 3.1E-13 88.1 8.2 71 116-193 131-211 (434)
410 1pz5_B Heavy chain of FAB (SYA 98.8 2E-08 6.9E-13 77.9 9.5 88 108-196 5-119 (220)
411 1mju_H Immunoglobulin MS6-12; 98.8 1.8E-08 6.2E-13 79.1 9.3 88 108-196 5-115 (227)
412 3bqu_C 3H6 FAB light chain; be 98.8 1.7E-09 5.7E-14 84.7 3.2 82 103-186 23-118 (233)
413 3nl4_H Antigen binding fragmen 98.8 3.3E-08 1.1E-12 76.5 10.6 87 108-196 4-114 (215)
414 3gkz_A Anti-methamphetamine si 98.8 2E-08 6.9E-13 79.9 9.4 91 104-196 142-248 (257)
415 2fbj_H IGA-kappa J539 FAB (hea 98.8 3.5E-08 1.2E-12 77.0 10.6 88 108-196 5-117 (220)
416 2gki_A Nuclease; anti-DNA anti 98.8 2E-08 6.9E-13 81.9 9.5 82 115-197 170-272 (291)
417 3umt_A SCFV heavy chain and li 98.8 2.2E-08 7.6E-13 79.7 9.5 89 108-197 7-121 (256)
418 1u3h_A T-cell receptor alpha-c 98.3 5.4E-10 1.9E-14 78.6 0.0 73 110-183 6-93 (110)
419 1pew_A JTO2, A lambda-6 type i 98.8 1.2E-08 4E-13 71.4 6.9 74 110-184 7-95 (109)
420 1svz_A Immunoglobulin;, single 98.8 2E-08 6.8E-13 79.4 9.0 77 106-183 130-228 (247)
421 2yc1_B Single chain antibody f 98.8 3.2E-08 1.1E-12 73.5 9.5 91 104-196 17-122 (146)
422 2fbj_H IGA-kappa J539 FAB (hea 98.8 1.2E-08 4.1E-13 79.7 7.5 67 116-188 134-212 (220)
423 2q87_A CMRF35-H antigen; all-b 98.8 1.6E-08 5.6E-13 70.6 7.4 82 115-196 7-107 (110)
424 2dru_A Chimera of CD48 antigen 98.8 1.2E-08 4.1E-13 77.8 7.2 80 115-198 10-105 (180)
425 1dee_B IGM RF 2A2; FAB-IBP com 98.8 4.3E-08 1.5E-12 76.6 10.6 77 108-185 5-103 (223)
426 1i1r_A GP130, interleukin-6 re 98.8 5.6E-08 1.9E-12 79.4 11.7 70 109-183 10-86 (303)
427 3pl6_D MBP peptide / T-cell re 98.8 5.8E-09 2E-13 83.6 5.6 64 117-186 159-241 (268)
428 4ei6_B Vbeta16 XV19 type II na 98.8 1.1E-08 3.7E-13 80.7 7.1 70 117-186 137-219 (245)
429 1mju_H Immunoglobulin MS6-12; 98.8 1.2E-08 4.1E-13 80.2 7.2 82 115-198 132-218 (227)
430 3o3u_N Maltose-binding peripla 98.8 3E-09 1E-13 94.3 4.2 80 114-197 376-469 (581)
431 2jju_A Signal regulatory prote 98.8 2.8E-08 9.6E-13 71.5 8.6 74 110-184 10-97 (127)
432 2w59_A IGY FCU3-4; immunoglobu 98.8 1.8E-09 6.2E-14 85.3 2.4 82 104-187 14-103 (231)
433 2aw2_A B and T lymphocyte atte 98.8 6.2E-08 2.1E-12 67.4 9.8 87 111-197 18-110 (120)
434 1eeq_A Kappa-4 immunoglobulin 98.8 2.7E-08 9.3E-13 70.1 8.3 75 108-184 6-100 (114)
435 2xqy_G A13-D6.3 monoclonal ant 98.8 2.7E-08 9.3E-13 80.2 9.3 90 107-197 10-124 (261)
436 3qib_D 2B4 beta chain; IG doma 98.8 2.1E-08 7.1E-13 80.5 8.5 93 103-197 27-141 (270)
437 1b6u_A KIR2DL3, P58 killer cel 98.8 6.6E-09 2.3E-13 84.0 5.3 92 103-197 7-103 (257)
438 3u6r_L Antibody 1:7 (light cha 98.7 6E-08 2E-12 71.8 9.8 87 108-196 5-105 (143)
439 1c5d_H Monoclonal antibody aga 98.7 2.3E-08 7.8E-13 77.7 7.8 88 108-196 5-116 (215)
440 1i1c_A IGG2A, IG gamma-2A chai 98.7 3.3E-08 1.1E-12 78.7 8.7 70 117-186 136-211 (239)
441 1p6f_A NKP46, natural cytotoxi 98.7 2.6E-08 8.8E-13 79.6 8.0 89 102-196 6-97 (242)
442 1bec_A 14.3.D T cell antigen r 98.7 5.8E-08 2E-12 76.6 9.9 76 107-184 3-95 (238)
443 1i1c_A IGG2A, IG gamma-2A chai 98.7 6.2E-09 2.1E-13 83.0 4.2 78 103-187 16-108 (239)
444 1iga_A IGA1; immunoglobulin; N 98.7 1.1E-07 3.8E-12 82.4 12.4 72 115-186 361-443 (475)
445 1nko_A Sialic acid binding IG- 98.7 4E-08 1.4E-12 70.9 8.0 92 107-199 10-129 (132)
446 1tvd_A T cell receptor, ES204 98.7 1.1E-07 3.9E-12 67.0 10.2 75 108-183 5-98 (116)
447 3eow_R Poliovirus receptor; im 98.7 2.3E-09 7.8E-14 83.3 1.4 83 115-197 10-115 (221)
448 3liz_H 4C3 monoclonal antibody 98.7 2.9E-08 1E-12 79.2 7.7 75 115-196 135-219 (253)
449 3m8o_H Immunoglobulin A1 heavy 98.7 5.2E-08 1.8E-12 75.7 8.9 66 117-188 136-214 (221)
450 3bn9_D E2 FAB heavy chain; ant 98.7 6.2E-08 2.1E-12 78.1 9.4 77 108-185 5-103 (257)
451 3bae_H WO2 IGG2A FAB fragment 98.7 3.3E-08 1.1E-12 77.5 7.5 77 115-193 141-222 (228)
452 3t0v_A Immunoglobulin variable 98.7 1.3E-07 4.3E-12 68.1 9.8 90 110-201 7-115 (123)
453 3o3u_N Maltose-binding peripla 98.7 3.4E-08 1.2E-12 87.5 8.1 71 116-186 483-566 (581)
454 2yz1_A Tyrosine-protein phosph 98.7 6.9E-08 2.3E-12 68.4 8.0 78 106-184 10-101 (120)
455 1op3_H FAB 2G12, heavy chain; 98.7 2.1E-08 7.1E-13 78.5 5.7 67 116-189 140-217 (225)
456 1dlf_L Anti-dansyl immunoglobu 98.7 5.6E-08 1.9E-12 68.3 7.4 74 109-184 7-99 (113)
457 2gjj_A A21 single-chain antibo 98.7 1.3E-07 4.3E-12 76.1 10.3 84 115-198 149-259 (264)
458 1l6x_A Immunoglobulin gamma-1 98.7 2.4E-08 8E-13 77.2 5.6 82 105-187 4-94 (207)
459 1oaq_L Light chain; antibody, 98.7 6.4E-08 2.2E-12 68.8 7.3 84 114-198 10-111 (120)
460 3kg5_A B-cell antigen receptor 98.7 1.5E-07 5.3E-12 68.8 9.5 89 106-197 21-119 (134)
461 3bp6_A Programmed cell death p 98.7 2.1E-07 7.2E-12 65.9 10.0 88 109-197 5-113 (117)
462 1fo0_A Protein (BM3.3 T cell r 98.7 8.7E-08 3E-12 67.7 7.8 68 115-182 11-95 (116)
463 1igt_B IGG2A intact antibody - 98.6 9.6E-08 3.3E-12 81.8 9.4 88 108-196 5-117 (444)
464 1gsm_A Madcam-1, mucosal addre 98.6 4.7E-07 1.6E-11 71.2 12.5 142 57-202 27-210 (210)
465 3m8o_H Immunoglobulin A1 heavy 98.6 1.5E-07 5.2E-12 73.1 9.6 76 108-184 5-104 (221)
466 1sy6_A T-cell surface glycopro 98.6 1.2E-08 4E-13 79.3 3.2 57 116-183 15-71 (204)
467 2i24_N NEW antigen receptor PB 98.6 1.3E-07 4.5E-12 67.8 8.5 74 108-182 5-87 (121)
468 2gki_A Nuclease; anti-DNA anti 98.6 7E-08 2.4E-12 78.7 7.7 77 107-184 26-124 (291)
469 1dn0_B IGM-kappa cold agglutin 98.6 2.2E-07 7.5E-12 73.2 10.2 74 108-182 5-99 (232)
470 3nfj_J T cell receptor beta ch 98.6 9.8E-08 3.4E-12 75.2 8.2 69 118-186 138-219 (245)
471 1x9q_A SCFV, 4M5.3 anti-fluore 98.6 1.2E-07 4.1E-12 76.1 8.7 75 108-183 156-254 (268)
472 2z35_A T-cell receptor alpha-c 98.6 1.2E-07 4E-12 66.5 7.6 71 110-181 7-92 (112)
473 2or7_A T-cell immunoglobulin a 98.6 1.1E-07 3.7E-12 66.9 7.2 84 115-198 8-111 (115)
474 1ypz_E T cell receptor delta, 98.6 2.3E-07 7.9E-12 72.0 9.7 75 108-184 6-94 (207)
475 2otu_A FV light chain variable 98.6 3.4E-07 1.2E-11 64.5 9.7 73 110-184 8-99 (115)
476 1ccz_A Protein (CD58); LFA-3, 98.6 3.8E-08 1.3E-12 74.4 5.0 62 122-195 108-169 (171)
477 1fo0_B Protein (BM3.3 T cell r 98.6 2.1E-07 7E-12 65.4 8.5 71 110-183 8-96 (112)
478 3bj9_1 Immunoglobulin IOTA cha 98.6 3.3E-07 1.1E-11 64.5 9.5 83 115-197 9-114 (116)
479 2aty_A Complement receptor chi 98.6 3.5E-07 1.2E-11 77.5 11.3 83 103-186 274-362 (376)
480 3to4_D NKT vbeta2 (mouse varia 98.6 5.6E-08 1.9E-12 77.3 6.0 73 110-185 8-98 (253)
481 3fku_X Neutralizing antibody F 98.6 1.1E-07 3.9E-12 77.0 7.9 73 110-183 7-101 (280)
482 4i0k_A CD276 antigen; immunogl 98.6 3.7E-09 1.3E-13 81.8 -0.9 81 115-196 6-106 (222)
483 3noi_A Natural cytotoxicity tr 98.6 3.6E-08 1.2E-12 70.1 4.4 77 106-183 10-103 (120)
484 3fku_X Neutralizing antibody F 98.6 9.9E-08 3.4E-12 77.4 7.4 70 114-184 149-234 (280)
485 4acp_A IG gamma-1 chain C regi 98.6 2.4E-07 8.1E-12 74.1 9.5 68 118-185 144-217 (240)
486 2qhl_A Novel immune-type recep 98.6 1.2E-07 4.1E-12 66.5 6.9 69 115-184 10-99 (111)
487 1oga_E TRBC1, T-cell receptor 98.6 1.5E-07 5.1E-12 74.9 8.3 76 106-183 6-98 (252)
488 1hzh_H IGG, immunoglobulin hea 98.6 8.1E-08 2.8E-12 82.7 7.1 78 115-194 143-226 (457)
489 1n26_A IL-6 receptor alpha cha 98.6 1.9E-08 6.5E-13 83.4 2.9 79 112-198 14-94 (325)
490 1zvo_C Myeloma immunoglobulin 98.6 7.8E-07 2.7E-11 78.2 13.2 80 118-197 414-505 (512)
491 3liz_H 4C3 monoclonal antibody 98.6 2.4E-07 8.2E-12 73.8 9.0 88 108-196 5-118 (253)
492 3nl4_H Antigen binding fragmen 98.6 3.3E-08 1.1E-12 76.5 3.7 77 115-195 131-212 (215)
493 2edo_A CD48 antigen; beta-sand 98.5 2.8E-08 9.5E-13 71.1 2.7 81 115-198 15-111 (121)
494 1iga_A IGA1; immunoglobulin; N 98.5 3.4E-07 1.2E-11 79.3 10.1 88 108-196 6-121 (475)
495 2h32_A Immunoglobulin IOTA cha 98.5 9.7E-08 3.3E-12 68.8 5.5 86 109-195 6-113 (126)
496 3to4_D NKT vbeta2 (mouse varia 98.5 9.5E-08 3.3E-12 76.0 5.9 68 118-185 138-218 (253)
497 1p4b_L Antibody variable light 98.5 4.3E-07 1.5E-11 66.3 8.8 88 109-198 11-116 (135)
498 3qhz_H Human monoclonal antibo 98.5 1.8E-07 6.2E-12 73.3 7.1 75 115-196 143-228 (232)
499 3qib_D 2B4 beta chain; IG doma 98.5 7E-08 2.4E-12 77.3 4.8 64 117-186 162-244 (270)
500 1ypz_F T-cell receptor gamma c 98.5 3.9E-07 1.3E-11 71.6 8.9 74 109-183 7-101 (230)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.85 E-value=1.2e-20 Score=134.00 Aligned_cols=96 Identities=20% Similarity=0.255 Sum_probs=86.6
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..||.|+..+.+. .+.+|+++.|.|.+.|.|.|.|+|+|||..|..+.++.+.. ....+.|.|.++..+|+|.|+|.|
T Consensus 11 ~~pP~f~~~p~~~-~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a 88 (107)
T 3knb_B 11 GSPPCFLRFPRPV-RVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPA-DGAEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp CEEEEEEECCCCE-EEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCE-ETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEeCCCcE-EEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEee-cCceEEEEEecCChhhCEEEEEEE
Confidence 4589999999888 99999999999999999999999999999999888887733 345678999999999999999999
Q ss_pred EeCCceEEEEEEEEeecC
Q psy5280 181 SNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~ 198 (202)
.|..|..++++.|.|..+
T Consensus 89 ~N~~G~~~~~~~l~V~~p 106 (107)
T 3knb_B 89 RNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EETTEEEEEEEEEEEEC-
T ss_pred EECCCEEEEEEEEEEEcC
Confidence 999999999999999764
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.83 E-value=1.1e-19 Score=127.24 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=82.6
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC--cEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG--RYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~--r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
+.||.|...+.+. .+.+|+++.|.|.+.|.|.|.|+|+|++..|.... ++.+.. ....++|.|.++..+|+|.|+|
T Consensus 3 ~~PP~i~~~p~~~-~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C 80 (100)
T 3knb_A 3 GIPPKIEALPSDI-SIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN-TDDLTTLIIMDVQKQDGGLYTL 80 (100)
T ss_dssp CEEEEECCCCSEE-EEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE-CSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCCEEEeCCCcE-EEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeec-ccceEEEEEcCCCccCCEEEEE
Confidence 3578888888877 89999999999999999999999999999997643 565532 3446789999999999999999
Q ss_pred EEEeCCceEEEEEEEEeec
Q psy5280 179 LASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 179 ~a~N~~G~~~~~~~L~V~~ 197 (202)
.|.|..|..++++.|.|.+
T Consensus 81 ~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 81 SLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEECCCEEEEEEEEEEEE
Confidence 9999999999999999875
No 3
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.82 E-value=7e-20 Score=144.04 Aligned_cols=135 Identities=18% Similarity=0.226 Sum_probs=103.6
Q ss_pred eeeecC-CCCCeeeecCCCeecCCCCce------------eeeccccccCCCCC-C-----CC-----------------
Q psy5280 58 QEKLNP-ERPKFEPYLPPGVPFHPDKSF------------YFPRDFDLERPPRE-G-----YA----------------- 101 (202)
Q Consensus 58 ~~~~~~-~~~~~~~w~~~g~~~~p~~~~------------~~~~~~~ie~~~~~-~-----~~----------------- 101 (202)
.|.+.. .|.+.+.|++||.++.++..+ +.+..+..++.|.| | .+
T Consensus 23 ~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~~~~~~~~~~~~~ 102 (207)
T 3rbs_A 23 WMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQ 102 (207)
T ss_dssp EEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEEEEECTHHHHHHH
T ss_pred EEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEEEEEEccchhhhc
Confidence 366654 688899999999998654322 22344445555554 3 10
Q ss_pred -------------CCCeEEeccCCeeEEecCCeEEEEEEEEee-cCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEcc
Q psy5280 102 -------------QAPRFLNQEHDTQYGIKNENSSLFWFVYGY-PKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINK 167 (202)
Q Consensus 102 -------------~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~-P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~ 167 (202)
.+|.|+..+ +. .+.+|+++.|.|.+.|. |.|.|+|+|++..|..+.++.. ..+..+|.|.+
T Consensus 103 ~~~~~~~~~~~~~~~P~~~~~~-~~-~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~---~~~~~~L~I~~ 177 (207)
T 3rbs_A 103 KEAEFQRQEWIRKQGPHFVEYL-SW-EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF---KDGICTLLITE 177 (207)
T ss_dssp HHHHHHHHHHHHHTSSEEEEEE-EE-EEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCC---SSEEEEEEETT
T ss_pred ccccccccccccCCCCceEecC-Cc-EEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEc---CCCEEEEEECC
Confidence 268887766 34 88999999999999999 9999999999999987666533 13345799999
Q ss_pred CCCCCCEEEEEEEEeCCceEEEEEEEEeec
Q psy5280 168 MLDRDVGMYEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
+..+|+|.|+|.|.|.+|.+++++.|++.|
T Consensus 178 v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~~ 207 (207)
T 3rbs_A 178 FSKKDAGIYEVILKDDRGKDKSRLKLVDEA 207 (207)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEECCC-
T ss_pred CCcccCEEEEEEEEcCCCEEEEEEEEecCC
Confidence 999999999999999999999999988754
No 4
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.81 E-value=1.3e-18 Score=120.23 Aligned_cols=95 Identities=19% Similarity=0.195 Sum_probs=85.6
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+....++.+.........|.|.++..+|+|.|+|.|.
T Consensus 4 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 4 EAPKIFERIQSQ-TVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp EEEEEEECCCCE-EEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCceEecCcce-EEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 478888888887 8999999999999999999999999999999887777665555667899999999999999999999
Q ss_pred eCCceEEEEEEEEeec
Q psy5280 182 NEHGTARQRVSSGNPA 197 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~ 197 (202)
|..|...+.+.|.|.+
T Consensus 83 N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 83 NIAGETSSHAFLLVQA 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCcEEEEEEEEEec
Confidence 9999999999999875
No 5
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.80 E-value=2.7e-19 Score=159.58 Aligned_cols=189 Identities=16% Similarity=0.193 Sum_probs=138.4
Q ss_pred CCCcccccCCCCCCCCCCCCCCCCCC-----CcccC----------------------CCCCCCccCCeeeeccc-----
Q psy5280 8 ERPKFEPYLPPGVPFHPDKSFYFPRD-----FDLER----------------------PPREGYAQAPRFLNQEH----- 55 (202)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~r----------------------~~~~~~~~~p~f~~~~~----- 55 (202)
.|++.+.|.++|..+.++.++.+-.+ +.+.+ ........+|.|+....
T Consensus 224 ~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v 303 (570)
T 3b43_A 224 TAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIV 303 (570)
T ss_dssp SSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCE
T ss_pred CCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEE
Confidence 57789999999999988776432110 11111 11112223577664321
Q ss_pred ------eeeeeecCCCCCeeeecCCCeecCCCCce----------eeeccccccCCCCC-C----------------CCC
Q psy5280 56 ------DTQEKLNPERPKFEPYLPPGVPFHPDKSF----------YFPRDFDLERPPRE-G----------------YAQ 102 (202)
Q Consensus 56 ------~~~~~~~~~~~~~~~w~~~g~~~~p~~~~----------~~~~~~~ie~~~~~-~----------------~~~ 102 (202)
...|.+.+.+.+.+.|+|+|.++.....+ +.+..+..++.|.| | ...
T Consensus 304 ~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 383 (570)
T 3b43_A 304 KQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE 383 (570)
T ss_dssp ESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEEC
T ss_pred cCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecC
Confidence 14488889999999999999987664322 22234444555554 2 125
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
+|.|...+.+. .+.+|+++.|.|.+.|.|.|.++|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|.|
T Consensus 384 ~P~~~~~~~~~-~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~A~N 461 (570)
T 3b43_A 384 PPVFRKKPHPV-ETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMS-ENFLTSIHILNVDSADIGEYQCKASN 461 (570)
T ss_dssp CCEECSCCCCE-EECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCeeecCCCce-eecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEE-cCCEEEEEECCCChhhCEEEEEEEEE
Confidence 78888777776 88899999999999999999999999999998888877633 34457899999999999999999999
Q ss_pred CCceEEEEEEEEeecC
Q psy5280 183 EHGTARQRVSSGNPAQ 198 (202)
Q Consensus 183 ~~G~~~~~~~L~V~~~ 198 (202)
..|...+.+.|.|..+
T Consensus 462 ~~G~~~~~~~l~v~~~ 477 (570)
T 3b43_A 462 DVGSDTCVGSITLKAP 477 (570)
T ss_dssp SSCEEEEEEEEEECCC
T ss_pred CCCeEEEEEEEEeccC
Confidence 9999999999888754
No 6
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.79 E-value=3.2e-18 Score=119.11 Aligned_cols=98 Identities=20% Similarity=0.249 Sum_probs=86.5
Q ss_pred CCCCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 99 GYAQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 99 ~~~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
....+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+..+.++.+. .......|.|.++..+|+|.|+|
T Consensus 4 ~~~~~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C 81 (103)
T 3qp3_A 4 TLDHAPRITLRMRSH-RVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYT-NTSGVLTLEILDCHTDDSGTYRA 81 (103)
T ss_dssp TTCEEEEEEECCCCE-EEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEE-EETTEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCCEEEeCCcce-EEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEE-ECCCEEEEEEcCCCcccCEEEEE
Confidence 345688999888877 8999999999999999999999999999999888887763 33456789999999999999999
Q ss_pred EEEeCCceEEEEEEEEeecC
Q psy5280 179 LASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 179 ~a~N~~G~~~~~~~L~V~~~ 198 (202)
.|.|..|..++.+.|.|.+.
T Consensus 82 ~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 82 VCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EEEETTEEEEEEEEEEEECC
T ss_pred EEEeCCCcEEEEEEEEEECC
Confidence 99999999999999999754
No 7
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.79 E-value=2.1e-18 Score=131.77 Aligned_cols=138 Identities=17% Similarity=0.148 Sum_probs=106.3
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCC------------ceeeeccccccCCCCC-CC-------------------CCCC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDK------------SFYFPRDFDLERPPRE-GY-------------------AQAP 104 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~------------~~~~~~~~~ie~~~~~-~~-------------------~~~P 104 (202)
..|.+.+.+.+.+.|+++|..+.... ..+....+..++.|.| |. ..+|
T Consensus 25 l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p 104 (194)
T 2a38_A 25 FEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPP 104 (194)
T ss_dssp EEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEE
T ss_pred EEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCCCCC
Confidence 44777777888899999998876532 1122344445555544 21 1356
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
.+...+... .+.+|+.+.|.|.+.|.|.|.+.|++++..+..+.++.+.. ......|.|.++..+|+|.|+|.|.|..
T Consensus 105 ~~~~~~~~~-~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 182 (194)
T 2a38_A 105 NFVQRLQSM-TVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQ-EGDLYSLLIAEAYPEDSGTYSVNATNSV 182 (194)
T ss_dssp EEEECCCCE-EECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEE-ETTEEEEEEEEECGGGCEEEEEEEEETT
T ss_pred EEEeCCccE-EEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEE-cCCEEEEEECCCChhcCeEEEEEEEeCC
Confidence 666666555 78899999999999999999999999999998887777633 3445689999999999999999999999
Q ss_pred ceEEEEEEEEee
Q psy5280 185 GTARQRVSSGNP 196 (202)
Q Consensus 185 G~~~~~~~L~V~ 196 (202)
|....++.|.|.
T Consensus 183 g~~~~~~~l~V~ 194 (194)
T 2a38_A 183 GRATSTAELLVQ 194 (194)
T ss_dssp EEEEEEEEEEEC
T ss_pred CceEEEEEEEEC
Confidence 999999998874
No 8
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.79 E-value=2.2e-18 Score=132.10 Aligned_cols=149 Identities=17% Similarity=0.219 Sum_probs=108.8
Q ss_pred cCCeeeeccce----------eeeeecCCCCCeeeecCCCeecCCCCc------------eeeeccccccCCCCC-CCC-
Q psy5280 46 QAPRFLNQEHD----------TQEKLNPERPKFEPYLPPGVPFHPDKS------------FYFPRDFDLERPPRE-GYA- 101 (202)
Q Consensus 46 ~~p~f~~~~~~----------~~~~~~~~~~~~~~w~~~g~~~~p~~~------------~~~~~~~~ie~~~~~-~~~- 101 (202)
.+|.|+..+.+ ..|.+.+.+.+.+.|+++|..+..... .+....+..++.|.| |.+
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 45666654433 447778888889999999988765422 222344455555554 211
Q ss_pred ---------------CCCeE-----EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeE
Q psy5280 102 ---------------QAPRF-----LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQA 161 (202)
Q Consensus 102 ---------------~~P~f-----i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~ 161 (202)
.+|.+ +..+... .+.+|+.+.|.|.+.|.|.|.+.|++++..+..+.++.+... ....
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~-~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~-~~~~ 160 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAV-HALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVT-RSFT 160 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEECCSSCBTTBEEE-EEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEEC-SSEE
T ss_pred ECCCceeEEEEEEEcCCCcCCCCccccccCeE-EEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEc-CCce
Confidence 11221 2112233 678899999999999999999999999999988777776332 3467
Q ss_pred EEEEcc-CCCCCCEEEEEEEEeCCceEEEEEEEEee
Q psy5280 162 TLFINK-MLDRDVGMYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 162 ~L~I~~-~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
.|.|.+ +...|+|.|+|.|.|..|..+.++.|.|.
T Consensus 161 ~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 161 SLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 899999 99999999999999999999999999885
No 9
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.78 E-value=7e-19 Score=156.91 Aligned_cols=187 Identities=15% Similarity=0.138 Sum_probs=134.8
Q ss_pred CCCcccccCCCCCCCCCCCCCCCCCC-----CcccC----------------------CCCCCCccCCeeeeccce----
Q psy5280 8 ERPKFEPYLPPGVPFHPDKSFYFPRD-----FDLER----------------------PPREGYAQAPRFLNQEHD---- 56 (202)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~r----------------------~~~~~~~~~p~f~~~~~~---- 56 (202)
.|++.+.|.++|..+..+.+..+-.. +.+.. ........+|.|...+.+
T Consensus 318 ~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~ 397 (570)
T 3b43_A 318 SPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETL 397 (570)
T ss_dssp SSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEEC
T ss_pred CCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeec
Confidence 57889999999999987765432110 11111 111111235666644332
Q ss_pred ------eeeeecCCCCCeeeecCCCeecCCCCce----------eeeccccccCCCCC-C----------------CCCC
Q psy5280 57 ------TQEKLNPERPKFEPYLPPGVPFHPDKSF----------YFPRDFDLERPPRE-G----------------YAQA 103 (202)
Q Consensus 57 ------~~~~~~~~~~~~~~w~~~g~~~~p~~~~----------~~~~~~~ie~~~~~-~----------------~~~~ 103 (202)
..|.+.+.|.+.+.|+|+|.++.....+ +....+..++.|.| | ...+
T Consensus 398 ~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~ 477 (570)
T 3b43_A 398 KGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAP 477 (570)
T ss_dssp TTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCC
T ss_pred CCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccC
Confidence 4488899999999999999987664322 11234444555554 2 1258
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEc-ccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELI-EMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l-~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
|.|+..+.+. .+.+|+.+.|.|.+.|.|.|.+.|+|++..+ ..+.++.+.. ....+.|.|.++..+|+|.|+|.|.|
T Consensus 478 P~~~~~~~~~-~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N 555 (570)
T 3b43_A 478 PRFVKKLSDI-STVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISY-SENIATLQFSRAEPANAGKYTCQIKN 555 (570)
T ss_dssp CEEEECCCCB-CCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECC-CSSEEEEEESSCCTTCCEEEEEEEEC
T ss_pred CcccccCCCc-eecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEE-CCCEEEEEECcCCHHHCEEEEEEEEE
Confidence 9999888877 8889999999999999999999999998655 4456666522 23467999999999999999999999
Q ss_pred CCceEEEEEEEEee
Q psy5280 183 EHGTARQRVSSGNP 196 (202)
Q Consensus 183 ~~G~~~~~~~L~V~ 196 (202)
.+|..++++.|.|.
T Consensus 556 ~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 556 EAGTQECFATLSVL 569 (570)
T ss_dssp SSCEEEEEEEECCB
T ss_pred CCcEEEEEEEEEEe
Confidence 99999999999886
No 10
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.78 E-value=1.5e-17 Score=128.68 Aligned_cols=142 Identities=14% Similarity=0.098 Sum_probs=109.2
Q ss_pred eeeeecCC-CCCeeeecCCCeecCCCCce----------eeeccccccCCCCC-CCC---C-------------------
Q psy5280 57 TQEKLNPE-RPKFEPYLPPGVPFHPDKSF----------YFPRDFDLERPPRE-GYA---Q------------------- 102 (202)
Q Consensus 57 ~~~~~~~~-~~~~~~w~~~g~~~~p~~~~----------~~~~~~~ie~~~~~-~~~---~------------------- 102 (202)
..|.+.+. +.+.+.|+++|.++.+...+ +.+..+..++.|.| |.+ .
T Consensus 22 l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~ 101 (212)
T 2r15_A 22 LYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYA 101 (212)
T ss_dssp EEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHH
T ss_pred EEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhh
Confidence 55777774 47789999999998764322 22344555555544 211 0
Q ss_pred --------------CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccC
Q psy5280 103 --------------APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKM 168 (202)
Q Consensus 103 --------------~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~ 168 (202)
.|.++........+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+.++.+.........|.|.++
T Consensus 102 ~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 181 (212)
T 2r15_A 102 EFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGV 181 (212)
T ss_dssp HHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSC
T ss_pred hccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCc
Confidence 344444444444889999999999999999999999999999998888887554455679999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 169 LDRDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
..+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 182 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 182 STADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred chHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 999999999999999999999999998765
No 11
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.76 E-value=7e-18 Score=116.65 Aligned_cols=96 Identities=23% Similarity=0.335 Sum_probs=81.9
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+....+..+.....+...|.|.++...|+|.|+|.|.
T Consensus 4 ~~P~~~~~p~~~-~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (100)
T 2kdg_A 4 GPPRFIQVPENM-SIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAK 82 (100)
T ss_dssp EEEECCCCCCCE-EEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEeCCCCE-EecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEE
Confidence 367777777776 8899999999999999999999999999998876544443334445689999999999999999999
Q ss_pred eCCceEEEEEEEEeecC
Q psy5280 182 NEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~~ 198 (202)
|..|..+.++.|.|.+.
T Consensus 83 n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 83 NRAGEATFTVQLDVLAK 99 (100)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred cCCCeEEEEEEEEEEec
Confidence 99999999999998764
No 12
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.76 E-value=1.5e-17 Score=114.68 Aligned_cols=95 Identities=23% Similarity=0.209 Sum_probs=80.5
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+.................|.|.++..+|+|.|+|.|.
T Consensus 4 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (99)
T 1u2h_A 4 APPTFKVSLMDQ-SVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAV 82 (99)
T ss_dssp EEEEEEECCCCE-EEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEEcCCce-EecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEE
Confidence 478888888777 8999999999999999999999999999998765443332223334589999999999999999999
Q ss_pred eCCceEEEEEEEEeec
Q psy5280 182 NEHGTARQRVSSGNPA 197 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~ 197 (202)
|..|...+.+.|.|..
T Consensus 83 N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 83 NEYGARQCEARLEVRG 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCceeEEEEEEEEC
Confidence 9999999999998864
No 13
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.76 E-value=2.5e-17 Score=113.49 Aligned_cols=94 Identities=22% Similarity=0.277 Sum_probs=83.9
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|.
T Consensus 5 ~~P~i~~~~~~~-~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~ 82 (99)
T 3puc_A 5 SKPVIVTGLQDT-TVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSE-DKGGFFLEIHKTDTSDSGLYTCTVK 82 (99)
T ss_dssp EEEEEEECCCCE-EEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCEEEecCccE-EEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEE-eCCEEEEEECCCCcccCEEEEEEEE
Confidence 468888888777 99999999999999999999999999999998888887743 3446689999999999999999999
Q ss_pred eCCceEEEEEEEEeec
Q psy5280 182 NEHGTARQRVSSGNPA 197 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~ 197 (202)
|..|..+..+.|.|.+
T Consensus 83 n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 83 NSAGSVSSSCKLTIKA 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEeEEEEEEEEe
Confidence 9999999999999875
No 14
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.75 E-value=1.3e-17 Score=118.45 Aligned_cols=95 Identities=17% Similarity=0.175 Sum_probs=84.2
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|.
T Consensus 6 ~pp~i~~~~~~~-~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (114)
T 2cqv_A 6 SGPQIIQFPEDQ-KVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVEN-SENGSKLTILAARQEHCGCYTLLVE 83 (114)
T ss_dssp CCCEESCCCCSE-EEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEE-CSSEEEEEETTCCTTTCEEEEEEEE
T ss_pred CCCEEEeCCCCe-EEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEE-cCCEEEEEECCCChhcCEEEEEEEE
Confidence 478898888777 89999999999999999999999999999998877887743 2346789999999999999999999
Q ss_pred eCCceEEEEEEEEeecC
Q psy5280 182 NEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~~ 198 (202)
|..|..++.+.|.|...
T Consensus 84 N~~g~~~~~~~l~V~~~ 100 (114)
T 2cqv_A 84 NKLGSRQAQVNLTVVDK 100 (114)
T ss_dssp CSSCEEECCEEEEEECS
T ss_pred ECCCcEEEEEEEEEECC
Confidence 99999999999998753
No 15
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.75 E-value=1.6e-17 Score=118.95 Aligned_cols=100 Identities=22% Similarity=0.342 Sum_probs=86.9
Q ss_pred CCCCCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc-CCcEEEEEeeCCeEEEEEccCCCCCCEEE
Q psy5280 98 EGYAQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM-GGRYDSSYTRNGQATLFINKMLDRDVGMY 176 (202)
Q Consensus 98 ~~~~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~-~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y 176 (202)
+....+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+.. ..++.+.....+..+|.|.++..+|+|.|
T Consensus 10 ~~~~~~p~f~~~p~~~-~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (116)
T 2kkq_A 10 HEHKRAPMFIYKPQSK-KVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWY 88 (116)
T ss_dssp CCCCBCCCBSSCCCCE-EEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEE
T ss_pred cCCCCCCeEEeCCCcE-EEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEE
Confidence 4456789999999988 999999999999999999999999999999875 56776644333445899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEeecC
Q psy5280 177 EALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 177 ~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
+|.|.|..|..+..+.|.|...
T Consensus 89 ~C~a~N~~G~~~~~~~l~V~~~ 110 (116)
T 2kkq_A 89 TVSAVNEAGVTTCNTRLDVTAR 110 (116)
T ss_dssp EEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEcCCCeEEEEEEEEEeCC
Confidence 9999999999999999998865
No 16
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.75 E-value=7e-18 Score=115.60 Aligned_cols=91 Identities=16% Similarity=0.181 Sum_probs=77.5
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--EEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--ELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
++|.|...+.+. .+.+|+.+.|.|.+.|.|.|.++|+|++ ..+.....+.. ......|.|.++..+|+|.|+|.
T Consensus 1 ~~P~i~~~~~~~-~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~---~~~~~~L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 1 LKPKILTASRKI-KIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDA---KSSTTSIFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCCEECCCCCEE-EECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEE---ETTEEEEECTTBCGGGCEEEEEE
T ss_pred CCCeEEcCCCce-EEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEe---cCCEEEEEECCCChhcCEEEEEE
Confidence 368887766655 8999999999999999999999999999 88766543332 24568899999999999999999
Q ss_pred EEeCCceEEEEEEEEee
Q psy5280 180 ASNEHGTARQRVSSGNP 196 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~ 196 (202)
|.|..|..++.+.|.|+
T Consensus 77 a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 77 VKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EEETTEEEEEEEEEEEC
T ss_pred EEcCCCeEEEEEEEEEC
Confidence 99999999999988874
No 17
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.75 E-value=2.8e-18 Score=140.07 Aligned_cols=135 Identities=18% Similarity=0.206 Sum_probs=101.2
Q ss_pred eeeeec-CCCCCeeeecCCCeecCCCCce------------eeeccccccCCCCC-C-----CC----------------
Q psy5280 57 TQEKLN-PERPKFEPYLPPGVPFHPDKSF------------YFPRDFDLERPPRE-G-----YA---------------- 101 (202)
Q Consensus 57 ~~~~~~-~~~~~~~~w~~~g~~~~p~~~~------------~~~~~~~ie~~~~~-~-----~~---------------- 101 (202)
..|.+. +.+.+.+.|+++|.++.....+ +....+..++.|.| | .+
T Consensus 127 l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~ 206 (312)
T 2y23_A 127 FWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKL 206 (312)
T ss_dssp EEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHH
T ss_pred EEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhh
Confidence 347777 7788899999999987764322 22234444455544 3 11
Q ss_pred --------------CCCeEEeccCCeeEEecCCeEEEEEEEEeecCC-ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEc
Q psy5280 102 --------------QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKP-KVSFYFNDELIEMGGRYDSSYTRNGQATLFIN 166 (202)
Q Consensus 102 --------------~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~ 166 (202)
.+|.|+.... . .+.+|+++.|.|.+.|.|.| .+.|+|++..+..+.++.+. .+...|.|.
T Consensus 207 ~~~~~~~~~~~~~~~~p~~~~~~~-~-~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~---~~~~~L~I~ 281 (312)
T 2y23_A 207 QKEAEFQRQEWIRKQGPHFVEYLS-W-EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK---DGICTLLIT 281 (312)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEEE-E-EEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC-------CEEEEEEC
T ss_pred cccccccccchhhccCCceeecce-E-EEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE---CCEEEEEEC
Confidence 1266654333 3 78899999999999999998 99999999999877776652 345799999
Q ss_pred cCCCCCCEEEEEEEEeCCceEEEEEEEEee
Q psy5280 167 KMLDRDVGMYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
++..+|+|.|+|.|.|..|...+++.|.+.
T Consensus 282 ~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 282 EFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp SCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred cCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 999999999999999999999999998875
No 18
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.75 E-value=5.1e-18 Score=144.04 Aligned_cols=136 Identities=19% Similarity=0.150 Sum_probs=106.8
Q ss_pred eeeeecCCCCCeeeecC-CCeecCCC------CceeeeccccccCCCCC-CC----------------CCCCeEEeccCC
Q psy5280 57 TQEKLNPERPKFEPYLP-PGVPFHPD------KSFYFPRDFDLERPPRE-GY----------------AQAPRFLNQEHD 112 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~-~g~~~~p~------~~~~~~~~~~ie~~~~~-~~----------------~~~P~fi~~~~~ 112 (202)
..|.+.+.+.+.+.|++ +|.++... ...+.+..+..++.|.| |. ..+|.|+..+.+
T Consensus 225 l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~ 304 (384)
T 3kld_A 225 LECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIIND 304 (384)
T ss_dssp EEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCC
T ss_pred EEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCc
Confidence 44778888999999998 55444322 12233455555666654 31 136778777777
Q ss_pred eeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy5280 113 TQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVS 192 (202)
Q Consensus 113 ~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 192 (202)
. .+.+|+++.|.|.+.|.|.|.++|+|+|..+..+.++.+ . .+.|.|.++..+|+|.|+|.|.|.+|...+++.
T Consensus 305 ~-~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~----~-~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~ 378 (384)
T 3kld_A 305 I-HVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQI----E-QGTLNITIVNLSDAGMYQCVAENKHGVIFSSAE 378 (384)
T ss_dssp E-EECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEE----E-TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred e-EecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEE----e-CCEEEEeecChhhCEEEEEEEEeCCceEEeceE
Confidence 7 889999999999999999999999999999988888776 2 358999999999999999999999999999999
Q ss_pred EEeecC
Q psy5280 193 SGNPAQ 198 (202)
Q Consensus 193 L~V~~~ 198 (202)
|.|.+.
T Consensus 379 L~V~~e 384 (384)
T 3kld_A 379 LSVIAE 384 (384)
T ss_dssp EEEC--
T ss_pred EEEecC
Confidence 999763
No 19
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.75 E-value=2.5e-17 Score=128.28 Aligned_cols=150 Identities=16% Similarity=0.159 Sum_probs=109.2
Q ss_pred CccCCeeeeccce----------eeeeecCCCCCeeeecCCCeecCCCC------------ceeeeccccc-cCCCCC-C
Q psy5280 44 YAQAPRFLNQEHD----------TQEKLNPERPKFEPYLPPGVPFHPDK------------SFYFPRDFDL-ERPPRE-G 99 (202)
Q Consensus 44 ~~~~p~f~~~~~~----------~~~~~~~~~~~~~~w~~~g~~~~p~~------------~~~~~~~~~i-e~~~~~-~ 99 (202)
++.+|.|...+.+ ..|.+.+.+.+.+.|+++|..+.... ..+.+..+.. ++.|.| |
T Consensus 3 g~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 3 GAHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp --CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 3456777765443 34777888888999999999875221 1222344444 555544 2
Q ss_pred C------------------------CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc-CCcEEEE
Q psy5280 100 Y------------------------AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM-GGRYDSS 154 (202)
Q Consensus 100 ~------------------------~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~-~~r~~i~ 154 (202)
. ...|.+...+... .+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~-~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~- 160 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTR-VIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSL- 160 (212)
T ss_dssp EEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCE-EEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEE-
T ss_pred EEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCce-EeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEc-
Confidence 1 0126777666665 788999999999999999999999999999876 445544
Q ss_pred EeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEE-EEEEeecCC
Q psy5280 155 YTRNGQATLFINKMLDRDVGMYEALASNEHGTARQR-VSSGNPAQG 199 (202)
Q Consensus 155 ~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~-~~L~V~~~~ 199 (202)
. .+.|.|.++..+|+|.|+|.|.|..|...+. +.|.|....
T Consensus 161 ---~-~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 161 ---K-DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp ---E-TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ---c-CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 1 3489999999999999999999999999765 789888654
No 20
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.74 E-value=1.1e-16 Score=129.17 Aligned_cols=141 Identities=16% Similarity=0.206 Sum_probs=110.3
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCce----------eeeccccccCCCCC-C----------------CCCCCeEEec
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKSF----------YFPRDFDLERPPRE-G----------------YAQAPRFLNQ 109 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~~----------~~~~~~~ie~~~~~-~----------------~~~~P~fi~~ 109 (202)
..|.+.+.+.+.+.|+++|..+.+...+ +....+..++.|.| | ...+|.++..
T Consensus 25 l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~ 104 (284)
T 2rik_A 25 FKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKK 104 (284)
T ss_dssp EEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCccccc
Confidence 4477788888899999999987654321 22244445555544 2 1247777766
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
+.....+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+... .....|.|.++...|+|.|+|.|.|..|....
T Consensus 105 ~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 183 (284)
T 2rik_A 105 LEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFV-ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS 183 (284)
T ss_dssp CCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEc-CCEEEEEECCCCcccCEEEEEEEEcCCCceeE
Confidence 66554788999999999999999999999999999988777766333 45788999999999999999999999999999
Q ss_pred EEEEEeecC
Q psy5280 190 RVSSGNPAQ 198 (202)
Q Consensus 190 ~~~L~V~~~ 198 (202)
.+.|.|..+
T Consensus 184 ~~~l~V~~~ 192 (284)
T 2rik_A 184 STSLKVKEP 192 (284)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 999988754
No 21
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.74 E-value=3.1e-17 Score=125.81 Aligned_cols=130 Identities=15% Similarity=0.152 Sum_probs=100.6
Q ss_pred eeeeec-CCCCCeeeecCCCeecCCCC-------------------ceeeeccccccCCCCC-C----------------
Q psy5280 57 TQEKLN-PERPKFEPYLPPGVPFHPDK-------------------SFYFPRDFDLERPPRE-G---------------- 99 (202)
Q Consensus 57 ~~~~~~-~~~~~~~~w~~~g~~~~p~~-------------------~~~~~~~~~ie~~~~~-~---------------- 99 (202)
..|.+. +.+.+.+.|+++|..+.... ..+.+..+..++.|.| |
T Consensus 22 l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l 101 (195)
T 2c5d_C 22 LRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYV 101 (195)
T ss_dssp EEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEE
T ss_pred EecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCceecccEEE
Confidence 447777 77888899999999876541 1223344455555544 2
Q ss_pred -CCCCCeEEeccCCeeEEecCCeEEEEEEEEeecCC-ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEE
Q psy5280 100 -YAQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKP-KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 100 -~~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
...+|.|...+.+. .+.+|+.+.|.|.+.|.|.| .+.|++++..+...... .....|.|.++. |+|.|+
T Consensus 102 ~V~~~p~~~~~~~~~-~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~------~~~~~L~i~~~~--d~G~Y~ 172 (195)
T 2c5d_C 102 GLEGLPYFLEEPEDR-TVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH------GPQRSLHVPGLN--KTSSFS 172 (195)
T ss_dssp EECCSCEEEECCCCE-EECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS------SCCEEEEECCCS--SCEEEE
T ss_pred EEecCCeEEcCCCcE-EEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc------CCCCeEEEcccc--cCceEE
Confidence 12567787777776 88899999999999999999 99999999988765432 246789999887 899999
Q ss_pred EEEEeCCceEE-EEEEEEe
Q psy5280 178 ALASNEHGTAR-QRVSSGN 195 (202)
Q Consensus 178 C~a~N~~G~~~-~~~~L~V 195 (202)
|.|.|..|... ..+.|.|
T Consensus 173 C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 173 CEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEETTEEEECCCEEEEE
T ss_pred EEEEcCCCceEEEEEEEEE
Confidence 99999999986 6888888
No 22
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.74 E-value=3.9e-17 Score=131.96 Aligned_cols=139 Identities=18% Similarity=0.160 Sum_probs=108.9
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCce----------eeeccccccCCCCC-CC----------------CCCCeEEec
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKSF----------YFPRDFDLERPPRE-GY----------------AQAPRFLNQ 109 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~~----------~~~~~~~ie~~~~~-~~----------------~~~P~fi~~ 109 (202)
..|.+.+.+.+.+.|+++|..+...... +....+..++.|.| |. ..+|.+...
T Consensus 119 l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~ 198 (284)
T 2rik_A 119 YECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKK 198 (284)
T ss_dssp EEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSC
T ss_pred EEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeC
Confidence 4477788888899999999987654321 22334444555544 21 146776666
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
+... .+.+|+++.|.|.+.|.|.|.+.|++++..+..+.++.+.. ......|.|.++..+|+|.|+|.|.|..|...+
T Consensus 199 ~~~~-~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 276 (284)
T 2rik_A 199 PHPV-ETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMS-ENFLTSIHILNVDSADIGEYQCKASNDVGSYTC 276 (284)
T ss_dssp CCCE-EECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEE-ETTEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCcc-eecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEE-cCCEEEEEEcCCCcccCEEEEEEEEeCCCceeE
Confidence 6665 78899999999999999999999999999999888877633 344678999999999999999999999999999
Q ss_pred EEEEEeec
Q psy5280 190 RVSSGNPA 197 (202)
Q Consensus 190 ~~~L~V~~ 197 (202)
++.|.|.+
T Consensus 277 ~~~l~V~~ 284 (284)
T 2rik_A 277 VGSITLKA 284 (284)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99998864
No 23
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=2.4e-17 Score=113.99 Aligned_cols=92 Identities=26% Similarity=0.320 Sum_probs=79.9
Q ss_pred CCCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 100 YAQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 100 ~~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
...+|.|...+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+........ .....|.|.++..+|+|.|+|.
T Consensus 8 ~~~~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~ 82 (99)
T 2yr3_A 8 MEVAPSFSSVLKDC-AVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCE----AGVAELHIQDALPEDHGTYTCL 82 (99)
T ss_dssp CCEEEEEEECCCCE-EECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEE----TTEEEEEECSCCTTCCBCEEEE
T ss_pred cccCCceeecCCCC-EEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEee----CCeEEEEECCCChhhCEEEEEE
Confidence 34578888888777 899999999999999999999999999988876554333 5578999999999999999999
Q ss_pred EEeCCceEEEEEEEEee
Q psy5280 180 ASNEHGTARQRVSSGNP 196 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~ 196 (202)
|.|..|..+.++.|.|.
T Consensus 83 a~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 83 AENALGQVSCSAWVTVH 99 (99)
T ss_dssp EECSSCEEEEECCEEEC
T ss_pred EEECCCeEEEEEEEEEC
Confidence 99999999988888773
No 24
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.73 E-value=5.3e-17 Score=113.51 Aligned_cols=96 Identities=20% Similarity=0.255 Sum_probs=83.7
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|
T Consensus 11 ~~~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a 88 (107)
T 3irg_B 11 GSPPCFLRFPRPV-RVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPA-DGAEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp CEEEEEEECCCCE-EEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCE-ETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeeEcCCccE-EEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEe-CCCEEEEEEccCCHHhCEEEEEEE
Confidence 3478898888777 89999999999999999999999999999998888877632 234558999999999999999999
Q ss_pred EeCCceEEEEEEEEeecC
Q psy5280 181 SNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~ 198 (202)
.|..|..+..+.|.|..+
T Consensus 89 ~n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 89 RNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EETTEEEEEEEEEEEEC-
T ss_pred EcCCCcEEEEEEEEEEcC
Confidence 999999999999998754
No 25
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.73 E-value=1.1e-16 Score=122.41 Aligned_cols=138 Identities=19% Similarity=0.224 Sum_probs=105.5
Q ss_pred eeeeecCCCC--CeeeecCCCeecCCCCc-----eeeeccccccCCCCC-CC---------------CCCCeEEeccCCe
Q psy5280 57 TQEKLNPERP--KFEPYLPPGVPFHPDKS-----FYFPRDFDLERPPRE-GY---------------AQAPRFLNQEHDT 113 (202)
Q Consensus 57 ~~~~~~~~~~--~~~~w~~~g~~~~p~~~-----~~~~~~~~ie~~~~~-~~---------------~~~P~fi~~~~~~ 113 (202)
..|.+.+.+. +.+.|+++|..+..... .+.+..+..++.|.| |. ..+|.+...+...
T Consensus 23 l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~l~V~~~p~~~~~~~~~ 102 (190)
T 2wv3_A 23 LQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSE 102 (190)
T ss_dssp EEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCEEEEECSEE
T ss_pred EEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeCCcccccEEEEEecCCcccccCCcc
Confidence 5577777765 78999999998765422 233355555555554 21 2467777666666
Q ss_pred eEEecCCeEEEEEEEEeecCCceEEEe--CCEEcc---cCCcEEEEEeeCCeEEEEEccCC-CCCCEEEEEEEEeCCceE
Q psy5280 114 QYGIKNENSSLFWFVYGYPKPKVSFYF--NDELIE---MGGRYDSSYTRNGQATLFINKML-DRDVGMYEALASNEHGTA 187 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P~P~i~W~k--~g~~l~---~~~r~~i~~~~~~~~~L~I~~~~-~~D~G~Y~C~a~N~~G~~ 187 (202)
.+.+|+.+.|.|.+.|.|.|.+.|++ ++..+. ...++.+.. ....+.|.|.++. .+|+|.|+|.|.|..|..
T Consensus 103 -~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~ 180 (190)
T 2wv3_A 103 -NKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIIN-KENYTELNIVNLQITEDPGEYECNATNSIGSA 180 (190)
T ss_dssp -EEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEE-CSSEEEEEECSCCTTTSCEEEEEEEECSSCEE
T ss_pred -eeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEec-CCCeeEEEEEeccccCCCEEEEEEEEecCCcc
Confidence 78999999999999999999999999 888775 456666532 2345689999999 799999999999999999
Q ss_pred EEEEEEEee
Q psy5280 188 RQRVSSGNP 196 (202)
Q Consensus 188 ~~~~~L~V~ 196 (202)
..++.|.|.
T Consensus 181 ~~~~~l~V~ 189 (190)
T 2wv3_A 181 SVSTVLRVR 189 (190)
T ss_dssp EEEEEEEEE
T ss_pred eeEEEEEEE
Confidence 999999886
No 26
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1.6e-17 Score=117.08 Aligned_cols=98 Identities=20% Similarity=0.210 Sum_probs=84.2
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc-CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM-GGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~-~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
..+|.|+..+.+. .+.+|+.+.|.|.+.|.|.|.+.|+|++..+.. ..++.+.....+...|.|.++..+|+|.|+|.
T Consensus 6 ~~~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm2_A 6 SGAPFFEMKLKHY-KIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIM 84 (110)
T ss_dssp SCCCCBSSCCCCE-EEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEE
T ss_pred CCCCEEEecCcCe-EEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEE
Confidence 4588888888777 899999999999999999999999999998875 56676644334455899999999999999999
Q ss_pred EEeCCceEEEEEEEEeecCC
Q psy5280 180 ASNEHGTARQRVSSGNPAQG 199 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~~~ 199 (202)
|.|..|..+..+.|.|....
T Consensus 85 a~N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 85 AANPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp EECTTCCEEECCCEEEECCS
T ss_pred EEECCCeEEEEEEEEEECCC
Confidence 99999999999999987653
No 27
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.73 E-value=1e-16 Score=124.97 Aligned_cols=139 Identities=13% Similarity=0.114 Sum_probs=100.5
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCC-----------ceeeeccc-cccCCCCC-CC-----------------------
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDK-----------SFYFPRDF-DLERPPRE-GY----------------------- 100 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~-----------~~~~~~~~-~ie~~~~~-~~----------------------- 100 (202)
..|.+.+.+.+.+.|+++|..+.... ..+.+..+ ..++.|.| |.
T Consensus 26 L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~ 105 (212)
T 2yd6_A 26 FICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIP 105 (212)
T ss_dssp EEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGCC
T ss_pred EEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCccC
Confidence 44777878888999999999876532 11223444 35555554 21
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccC---CcEEEEEeeCCeEEEEEccCCCCCCEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMG---GRYDSSYTRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~---~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
...|.+...+... .+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+. .......|.|.++..+|+|.|+
T Consensus 106 ~~~p~~~~~~~~~-~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~ 183 (212)
T 2yd6_A 106 RGFPTIDMGPQLK-VVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQL-RSESIGALQIEQSEESDQGKYE 183 (212)
T ss_dssp TTCCEEEECCCCE-EEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEE-EETTEEEEEECSCCGGGCEEEE
T ss_pred CCcceeecCCcce-eEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEE-ecCCeEEEEEcCCCcccCEEEE
Confidence 0126676666666 7889999999999999999999999999998754 445442 2244689999999999999999
Q ss_pred EEEEeCCceEEE-EEEEEeec
Q psy5280 178 ALASNEHGTARQ-RVSSGNPA 197 (202)
Q Consensus 178 C~a~N~~G~~~~-~~~L~V~~ 197 (202)
|.|.|..|...+ .+.|.|..
T Consensus 184 C~a~N~~G~~~s~~a~l~~~~ 204 (212)
T 2yd6_A 184 CVATNSAGTRYSAPANLYVRG 204 (212)
T ss_dssp EEEEETTEEEECCCEEEEEEC
T ss_pred EEEECCCCccccccccEEEEe
Confidence 999999998754 46666654
No 28
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.73 E-value=6.8e-17 Score=111.62 Aligned_cols=90 Identities=7% Similarity=-0.050 Sum_probs=77.0
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.+ |.|.+.|+|||..|..+.++.+.. ....+.|.|.++..+|+|.|+|.|
T Consensus 3 ~~~~~~~~~~~~~-~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~-~g~~~~L~I~~v~~~D~G~Y~C~a 79 (93)
T 1waa_A 3 MALIEVEKPLYGV-EVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIE-DGKKHILILHNCQLGMTGEVSFQA 79 (93)
T ss_dssp CCCCCEEECCCCE-EEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEE-ETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCcEeeccCcce-EEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEE-ECCEEEEEECCCChhhCEEEEEEE
Confidence 3578899999888 9999999999999987 558999999999999888887743 345678999999999999999999
Q ss_pred EeCCceEEEEEEEEeec
Q psy5280 181 SNEHGTARQRVSSGNPA 197 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~ 197 (202)
.|. ..++.|.|.+
T Consensus 80 ~n~----~~sa~L~V~~ 92 (93)
T 1waa_A 80 ANT----KSAANLKVKE 92 (93)
T ss_dssp TTE----EEEEEEEEEC
T ss_pred CCC----cEEEEEEEEc
Confidence 884 4677888765
No 29
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.73 E-value=8.7e-17 Score=120.43 Aligned_cols=97 Identities=21% Similarity=0.301 Sum_probs=86.4
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+....++.+.........|.|.++...|+|.|+|.|
T Consensus 39 ~~~P~~~~~~~~~-~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 117 (154)
T 1fhg_A 39 HVKPYFTKTILDM-EVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKA 117 (154)
T ss_dssp CEEEEEEECCCCE-EEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEccCCcE-EEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEE
Confidence 3578898888887 899999999999999999999999999999988888877544445679999999999999999999
Q ss_pred EeCCceEEEEEEEEeecC
Q psy5280 181 SNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~ 198 (202)
.|..|...+.+.|.|...
T Consensus 118 ~N~~G~~~~~~~l~V~~~ 135 (154)
T 1fhg_A 118 VNSLGEATCTAELLVETM 135 (154)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EECCCeEEEEEEEEEeCc
Confidence 999999999999998765
No 30
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.72 E-value=1.2e-17 Score=127.35 Aligned_cols=137 Identities=16% Similarity=0.100 Sum_probs=102.6
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCC---------ceeeeccccccCCCCC-CC-----------------CCCCeEEec
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDK---------SFYFPRDFDLERPPRE-GY-----------------AQAPRFLNQ 109 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~---------~~~~~~~~~ie~~~~~-~~-----------------~~~P~fi~~ 109 (202)
..|.+.+.+.+.+.|+++|..+.... ..+....+..++.|.| |. ..+|.+...
T Consensus 27 l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~ 106 (192)
T 2iep_A 27 FMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRP 106 (192)
T ss_dssp EECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEEC
T ss_pred EEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccC
Confidence 44667777788999999998875421 1122344444555543 21 124555555
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEE-
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTAR- 188 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~- 188 (202)
+... .+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+ ...+.|.|.++..+|+|.|+|.|.|..|...
T Consensus 107 ~~~~-~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s 181 (192)
T 2iep_A 107 PINV-KIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAV----LESGSLRIHNVQKEDAGQYRCVAKNSLGTAYS 181 (192)
T ss_dssp CCCE-EEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEE----CTTSCEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred Ccce-EEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEE----ecCCcEEEecCChhhCEEEEEEEEcCCCcEEE
Confidence 5555 788999999999999999999999999999988777766 4456899999999999999999999999884
Q ss_pred EEEEEEeecC
Q psy5280 189 QRVSSGNPAQ 198 (202)
Q Consensus 189 ~~~~L~V~~~ 198 (202)
..+.|.|..+
T Consensus 182 ~~~~l~V~~p 191 (192)
T 2iep_A 182 KLVKLEVEVF 191 (192)
T ss_dssp CCEEEEEEC-
T ss_pred EEEEEEEEeC
Confidence 4577877654
No 31
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.72 E-value=1.1e-16 Score=110.12 Aligned_cols=94 Identities=20% Similarity=0.261 Sum_probs=80.1
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcc--cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIE--MGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~--~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.+|.|...+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+. ...++.+.. ......|.|.++..+|+|.|+|.
T Consensus 4 ~pP~i~~~~~~~-~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~ 81 (100)
T 3irg_A 4 IPPKIEALPSDI-SIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN-TDDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEEECCCCSEE-EEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE-CSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeeecCCCcE-EEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEe-cCCEEEEEEeecCcccCEEEEEE
Confidence 467777766666 89999999999999999999999999999986 355666632 23457899999999999999999
Q ss_pred EEeCCceEEEEEEEEeec
Q psy5280 180 ASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~ 197 (202)
|.|..|..+..+.|.|..
T Consensus 82 a~n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 82 LGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEeCCCcEEEEEEEEEEe
Confidence 999999999999998864
No 32
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=3.2e-17 Score=113.54 Aligned_cols=93 Identities=18% Similarity=0.162 Sum_probs=81.3
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc-CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM-GGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~-~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+.. ..++.+ ...+.|.|.++..+|+|.|+|.
T Consensus 6 ~~~P~i~~~p~~~-~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~ 80 (100)
T 2edj_A 6 SGPPIILQGPANQ-TLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATI----QEQGTLQIKNLRISDTGTYTCV 80 (100)
T ss_dssp CSSCEEEECCCCE-EEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEE----CTTCCEEEESCCTTTCCEEEEE
T ss_pred CCCCEEEeCcCCE-EEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEE----cCCCEEEEccCCcccCEEEEEE
Confidence 3588898888877 899999999999999999999999999988873 455555 4456899999999999999999
Q ss_pred EEeCCceEEEEEEEEeecC
Q psy5280 180 ASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|..|.....+.|.|..+
T Consensus 81 a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 81 ATSSSGETSWSAVLDVTES 99 (100)
T ss_dssp EECSSCCCBCCEEEEEESC
T ss_pred EEcCCCCEEEEEEEEEecC
Confidence 9999999999999998865
No 33
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.72 E-value=6.3e-17 Score=122.81 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=97.1
Q ss_pred eeeeecCCCCCeeeecCCCeecCCC--C-------ceeeeccccccCCCCC-CCC------------------CCCeEEe
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPD--K-------SFYFPRDFDLERPPRE-GYA------------------QAPRFLN 108 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~--~-------~~~~~~~~~ie~~~~~-~~~------------------~~P~fi~ 108 (202)
..|.+.+.+.+.+.|+++|..+... . ..+....+..++.|.| |.+ .+|.+..
T Consensus 22 l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~ 101 (189)
T 2v5t_A 22 VVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISM 101 (189)
T ss_dssp ECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEEC
T ss_pred EEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCccc
Confidence 4477788888889999999875431 1 1122344455555544 210 1233322
Q ss_pred ccCC-eeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 109 QEHD-TQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 109 ~~~~-~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
.... ...+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+ ......|.|.++..+|+|.|+|.|.|..|..
T Consensus 102 ~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 178 (189)
T 2v5t_A 102 PQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL---KGSNTELTVRNIINSDGGPYVCRATNKAGED 178 (189)
T ss_dssp SCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEE---ETTTTEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred ccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEE---ecCCCEEEEcCCChhhCeeEEEEEEeCCCce
Confidence 2221 22456799999999999999999999999999988777665 2445789999999999999999999999999
Q ss_pred EEEEEEEeecC
Q psy5280 188 RQRVSSGNPAQ 198 (202)
Q Consensus 188 ~~~~~L~V~~~ 198 (202)
..++.|.|..+
T Consensus 179 ~~~~~l~V~vq 189 (189)
T 2v5t_A 179 EKQAFLQVFVQ 189 (189)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEEEEeC
Confidence 99999988753
No 34
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.71 E-value=1.5e-16 Score=130.08 Aligned_cols=96 Identities=20% Similarity=0.246 Sum_probs=81.4
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
.|.++..+.....+.+|+.+.|.|.+.|.|.|.+.|++++..+..+.++.+.........|.|.++..+|+|.|+|.|.|
T Consensus 221 ~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 300 (317)
T 2y25_A 221 RARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKN 300 (317)
T ss_dssp SCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEE
T ss_pred CCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 35565554444488999999999999999999999999999998888877733323446899999999999999999999
Q ss_pred CCceEEEEEEEEeecC
Q psy5280 183 EHGTARQRVSSGNPAQ 198 (202)
Q Consensus 183 ~~G~~~~~~~L~V~~~ 198 (202)
..|..+..+.|.|..+
T Consensus 301 ~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 301 KYGSETSDFTVSVFIP 316 (317)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEcC
Confidence 9999999999999865
No 35
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.71 E-value=3.4e-16 Score=107.79 Aligned_cols=91 Identities=19% Similarity=0.312 Sum_probs=79.1
Q ss_pred EeccCCeeEEecCCeEEEEEEEEee-cCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGY-PKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~-P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
...+.+. .+.+|+++.|.|.+.|. |.|.+.|+|++..+..+.++.+.. ..+...|.|.++..+|+|.|+|.|.|..|
T Consensus 5 ~~~~~~~-~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 5 SGQIMHA-VGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITY-EDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp ECCCCCE-EECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eccCcCE-EEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEE-cCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 3445565 89999999999999997 999999999999998888887633 34567899999999999999999999999
Q ss_pred eEEEEEEEEeecCC
Q psy5280 186 TARQRVSSGNPAQG 199 (202)
Q Consensus 186 ~~~~~~~L~V~~~~ 199 (202)
...+.+.|.|...+
T Consensus 83 ~~~~~~~l~V~~~~ 96 (97)
T 2bk8_A 83 EDSSYAELFVKGVR 96 (97)
T ss_dssp EEEEEEEEEETTTC
T ss_pred eEeEEEEEEEEecC
Confidence 99999999987653
No 36
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.9e-17 Score=116.53 Aligned_cols=98 Identities=21% Similarity=0.310 Sum_probs=84.6
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+....+..+.........|.|.++..+|+|.|+|.|
T Consensus 7 ~~~P~i~~~~~~~-~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm3_A 7 GFRPHFLQAPGDL-TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIA 85 (110)
T ss_dssp CCCCEEEECCCEE-EEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEE
T ss_pred CCCCcEEeCCCcE-EEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEE
Confidence 3589998888777 999999999999999999999999999998887665554333344578999999999999999999
Q ss_pred EeCCceEEEEEEEEeecCC
Q psy5280 181 SNEHGTARQRVSSGNPAQG 199 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~~ 199 (202)
.|..|..+..+.|.|..+.
T Consensus 86 ~n~~g~~~~~~~l~V~~~p 104 (110)
T 2dm3_A 86 TNRAGQNSFSLELVVAAKE 104 (110)
T ss_dssp ECSSCEEEECCEEEEECCC
T ss_pred ECCCCEEEEEEEEEEeCCC
Confidence 9999999999999998664
No 37
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.71 E-value=2.6e-16 Score=128.27 Aligned_cols=151 Identities=17% Similarity=0.214 Sum_probs=110.0
Q ss_pred ccCCeeeeccce----------eeeeecCCCCCeeeecCCCeecCCCCc------------eeeeccccccCCCCC-CCC
Q psy5280 45 AQAPRFLNQEHD----------TQEKLNPERPKFEPYLPPGVPFHPDKS------------FYFPRDFDLERPPRE-GYA 101 (202)
Q Consensus 45 ~~~p~f~~~~~~----------~~~~~~~~~~~~~~w~~~g~~~~p~~~------------~~~~~~~~ie~~~~~-~~~ 101 (202)
+.+|.|+..+.+ ..|.+.+.+.+.+.|+++|..+..+.. .+.+..+..++.|.| |.+
T Consensus 2 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 346777655443 447778888889999999998765422 122344555555554 211
Q ss_pred ----------------CCCeE-----EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCe
Q psy5280 102 ----------------QAPRF-----LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQ 160 (202)
Q Consensus 102 ----------------~~P~f-----i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~ 160 (202)
.+|.+ +..+.+. .+.+|+.+.|.|.+.|.|.|.+.|++++..+..+.++.+.. ....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~-~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~-~~~~ 159 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAV-HALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIV-TRSF 159 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEECCCHHHHSSCCE-EEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEE-CSSE
T ss_pred EcCCCCccceEEEEEecCCccCCCccccccccE-EecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEE-cCCc
Confidence 12222 1112334 77889999999999999999999999999988777776632 2346
Q ss_pred EEEEEcc-CCCCCCEEEEEEEEeCCceEEEEEEEEeec
Q psy5280 161 ATLFINK-MLDRDVGMYEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 161 ~~L~I~~-~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
..|.|.+ +...|+|.|+|.|.|..|....++.|.|..
T Consensus 160 ~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 197 (305)
T 2nzi_A 160 TSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (305)
T ss_dssp EEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred eEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEec
Confidence 7899999 999999999999999999999998888764
No 38
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=5.2e-17 Score=113.54 Aligned_cols=91 Identities=12% Similarity=0.006 Sum_probs=78.6
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+. .+.+|+++.|.|.+ .|.|.++|+|||..|..+.++.+.. ....+.|.|.++..+|+|.|+|.|.
T Consensus 6 ~p~~~~~~~~~~-~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~-~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (100)
T 2yuz_A 6 SGLKILTPLTDQ-TVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQ-KGRIHKLVIANALTEDEGDYVFAPD 81 (100)
T ss_dssp CCCCCSBCCCCE-EEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEE-CSSEEEEEESSCCGGGCSEEEEEES
T ss_pred CCCEEeccCCce-EEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEE-eCCEEEEEECCCChhhCEEEEEEEc
Confidence 478888888888 99999999999999 8999999999999999888888743 3445789999999999999999999
Q ss_pred eCCceEEEEEEEEeecC
Q psy5280 182 NEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~~ 198 (202)
|. ..++++.|.|..+
T Consensus 82 N~--~~~~~a~L~V~~~ 96 (100)
T 2yuz_A 82 AY--NVTLPAKVHVISG 96 (100)
T ss_dssp SS--CCCEEEEEEEECC
T ss_pred CC--CeeEEEEEEEeCC
Confidence 98 5566777887754
No 39
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.70 E-value=1.8e-16 Score=120.85 Aligned_cols=140 Identities=14% Similarity=0.163 Sum_probs=102.1
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCce----------eeeccccccCCCCC-CCC----------------CCCeEEec
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKSF----------YFPRDFDLERPPRE-GYA----------------QAPRFLNQ 109 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~~----------~~~~~~~ie~~~~~-~~~----------------~~P~fi~~ 109 (202)
..|.+.+.+.+.+.|+++|..+...... +....+..++.|.| |.+ .+|.+...
T Consensus 27 l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~ 106 (197)
T 3lcy_A 27 LSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPG 106 (197)
T ss_dssp EEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECTT
T ss_pred EEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCCCCCCC
Confidence 3477777788889999999887654322 22234444455544 211 12222211
Q ss_pred --cCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCC-CCCEEEEEEEEeCCce
Q psy5280 110 --EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLD-RDVGMYEALASNEHGT 186 (202)
Q Consensus 110 --~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~N~~G~ 186 (202)
......+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+.. ......|.|.++.. +|+|.|+|.|.|..|.
T Consensus 107 ~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~ 185 (197)
T 3lcy_A 107 YPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIEN-TEHYTHLVMKNVQRKTHAGKYKVQLSNVFGT 185 (197)
T ss_dssp SCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE-CSSEEEEEESSCCHHHHCEEEEEEEECSSCE
T ss_pred ccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEE-cCCEEEEEEccccchhhCceEEEEEEcCcCc
Confidence 1233367889999999999999999999999999998888777632 23357899999995 8999999999999999
Q ss_pred EEEEEEEEeec
Q psy5280 187 ARQRVSSGNPA 197 (202)
Q Consensus 187 ~~~~~~L~V~~ 197 (202)
....+.|.|..
T Consensus 186 ~~~~~~l~V~~ 196 (197)
T 3lcy_A 186 VDAILDVEIQD 196 (197)
T ss_dssp EEEEEEEEEEC
T ss_pred eEEEEEEEEec
Confidence 99999998864
No 40
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.70 E-value=2.8e-17 Score=115.82 Aligned_cols=95 Identities=17% Similarity=0.228 Sum_probs=84.2
Q ss_pred CCCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 100 YAQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 100 ~~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
...+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.
T Consensus 11 ~~~~~~i~~~p~~~-~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~ 88 (106)
T 1nct_A 11 TTLAARILTKPRSM-TVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTT-TKYKSTFEISSVQASDEGNYSVV 88 (106)
T ss_dssp SSCCCEEEECCCCE-EESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEE-CSSEEEEEECCCCSSCCSEEEEC
T ss_pred CCCCCEEEECCCCE-EEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEE-CCCEEEEEECcCCchhCEEEEEE
Confidence 34578999888888 99999999999999999999999999999988888887743 23467999999999999999999
Q ss_pred EEeCCceEEEEEEEEee
Q psy5280 180 ASNEHGTARQRVSSGNP 196 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~ 196 (202)
|.|..|..+.++.|.|.
T Consensus 89 a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 89 VENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CBCSSCBCCEEEEEEEC
T ss_pred EEeCCCeEEEEEEEEEE
Confidence 99999999999998885
No 41
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.70 E-value=9.8e-17 Score=124.84 Aligned_cols=150 Identities=17% Similarity=0.176 Sum_probs=104.7
Q ss_pred CccCCeeeeccce----------eeeeecCCCCCeeeecCCCeecCCCC-----------cee---eeccccccCCCCC-
Q psy5280 44 YAQAPRFLNQEHD----------TQEKLNPERPKFEPYLPPGVPFHPDK-----------SFY---FPRDFDLERPPRE- 98 (202)
Q Consensus 44 ~~~~p~f~~~~~~----------~~~~~~~~~~~~~~w~~~g~~~~p~~-----------~~~---~~~~~~ie~~~~~- 98 (202)
...+|.|+..+.+ ..|.+.+.+.+.+.|+++|..+.... ..+ ....+..++.|.|
T Consensus 6 ~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 6 QYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEE
T ss_pred ccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEE
Confidence 3446666655443 34777888888899999999875431 111 1233344555544
Q ss_pred CC------------------CCCCeEEeccCCeeEEecCCeEEEEEEE-EeecCCceEEEeCCEEccc--------CCcE
Q psy5280 99 GY------------------AQAPRFLNQEHDTQYGIKNENSSLFWFV-YGYPKPKVSFYFNDELIEM--------GGRY 151 (202)
Q Consensus 99 ~~------------------~~~P~fi~~~~~~~~v~~G~~v~L~C~v-~G~P~P~i~W~k~g~~l~~--------~~r~ 151 (202)
|. ..+|.+...+... .+.+|+.+.|.|.+ .|.|.|.+.|++++..+.. ..++
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 164 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDT-RVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRV 164 (217)
T ss_dssp EEEEETTEEEECCCEEEEECEECCSCSBCCCCE-EECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSE
T ss_pred EEEecCCCccccccceEEEEEeCCCcEECCCcc-EEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcE
Confidence 21 0134444445555 78899999999999 9999999999999998873 3344
Q ss_pred EEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 152 DSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 152 ~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
.+ ...+.|.|.++..+|+|.|+|.|.|..|...++..+.+...
T Consensus 165 ~~----~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 165 RI----VDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp EE----ETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred Ee----cCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 43 23458999999999999999999999999887766555533
No 42
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=4.2e-16 Score=111.32 Aligned_cols=95 Identities=17% Similarity=0.199 Sum_probs=78.0
Q ss_pred CCCeEEec--cCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 102 QAPRFLNQ--EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 102 ~~P~fi~~--~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.+|.|... ......+.+|+++.|.|.+.|.|.|.+.|+|++..+. ..++.+. .......|.|.++..+|+|.|+|.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~ 97 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVR-TSDFDTVFFVRQAARSDSGEYELS 97 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEE-ECSSEEEEEESSCCTTTCEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEE-ECCCeEEEEECCCChhcCEEEEEE
Confidence 36777432 2233488999999999999999999999999999987 4555553 234467799999999999999999
Q ss_pred EEeCCceEEEEEEEEeecC
Q psy5280 180 ASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|..|..++.+.|.|...
T Consensus 98 a~N~~G~~~~~~~l~V~~~ 116 (118)
T 2e7c_A 98 VQIENMKDTATIRIRVVEK 116 (118)
T ss_dssp EECSSCEECCEEEEEEECC
T ss_pred EEeCCCeEEEEEEEEEEcC
Confidence 9999999999999998764
No 43
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.69 E-value=9.2e-17 Score=110.58 Aligned_cols=88 Identities=11% Similarity=0.059 Sum_probs=77.9
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+|.|...+.+. .+.+|+++.|.|.+.|.| |.+.|+|++..+..+.++.+ . ...|.|.++..+|+|.|+|.|
T Consensus 7 ~~pp~~~~~~~~~-~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~----~-~~~L~i~~~~~~D~G~Y~C~a 79 (95)
T 2ckn_A 7 AQPWGVPVEVESL-LVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRI----T-GEEVEVRDSIPADSGLYACVT 79 (95)
T ss_dssp SCSCCBTTBBCCE-EECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEE----C-SSEEEESSCCGGGSEEEEEEE
T ss_pred CCCCEEEcCcceE-EEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEE----e-CCEEEECCCChHHCEEEEEEe
Confidence 3467777777776 899999999999999998 89999999999988778776 2 568999999999999999999
Q ss_pred EeCCceEEEEEEEEe
Q psy5280 181 SNEHGTARQRVSSGN 195 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V 195 (202)
.|..|.....+.|.|
T Consensus 80 ~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 80 SSPSGSDTTYFSVNV 94 (95)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred ccCCCcEEEEEEEEE
Confidence 999999998888877
No 44
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.69 E-value=7.1e-17 Score=136.39 Aligned_cols=137 Identities=18% Similarity=0.220 Sum_probs=109.4
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCce--------eeeccccccCCCCC-CC----------------CCCCeEEeccC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKSF--------YFPRDFDLERPPRE-GY----------------AQAPRFLNQEH 111 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~~--------~~~~~~~ie~~~~~-~~----------------~~~P~fi~~~~ 111 (202)
..|.+.+.+.+.+.|+++|..+...... +....+..++.|.| |. ..+|.++..+.
T Consensus 241 l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~ 320 (403)
T 3laf_A 241 LECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPS 320 (403)
T ss_dssp ECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCC
T ss_pred EEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCc
Confidence 3477778888899999999887643221 23344555555544 21 14677777777
Q ss_pred CeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy5280 112 DTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRV 191 (202)
Q Consensus 112 ~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~ 191 (202)
+. .+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+.++.+ .....|.|.++..+|+|.|+|.|.|..|..++++
T Consensus 321 ~~-~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 395 (403)
T 3laf_A 321 NL-YAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQI----VGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSA 395 (403)
T ss_dssp CE-ECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEE----ETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ce-EEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEE----ecCccEEEeccccccCEEEEEEEEcCCceEEEEE
Confidence 66 788999999999999999999999999999988887776 3456899999999999999999999999999999
Q ss_pred EEEeecC
Q psy5280 192 SSGNPAQ 198 (202)
Q Consensus 192 ~L~V~~~ 198 (202)
.|.|..+
T Consensus 396 ~l~V~~P 402 (403)
T 3laf_A 396 QLIVPKP 402 (403)
T ss_dssp EEECCCC
T ss_pred EEEEeCC
Confidence 9999865
No 45
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.69 E-value=1.2e-16 Score=134.38 Aligned_cols=135 Identities=17% Similarity=0.172 Sum_probs=106.6
Q ss_pred eeeeecCCCCCeeeecCCCeecCC----CCceeeeccccccCCCCC-CC----------------CCCCeEEeccCCeeE
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHP----DKSFYFPRDFDLERPPRE-GY----------------AQAPRFLNQEHDTQY 115 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p----~~~~~~~~~~~ie~~~~~-~~----------------~~~P~fi~~~~~~~~ 115 (202)
..|.+.+.+.+.+.|++++..+.. ....+....+..++.|.| |. ..+|.|+..+.+. .
T Consensus 227 l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~-~ 305 (382)
T 1cs6_A 227 LECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDT-E 305 (382)
T ss_dssp EECEEEEESCCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCE-E
T ss_pred EEEEEccCCCCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCcc-E
Confidence 347777788889999998876532 122233345555555554 21 1367777777776 8
Q ss_pred EecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEe
Q psy5280 116 GIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSGN 195 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V 195 (202)
+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+ . .+.|.|.++..+|+|.|+|.|.|..|...+++.|.|
T Consensus 306 ~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~----~-~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 380 (382)
T 1cs6_A 306 ADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEV----S-GGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTV 380 (382)
T ss_dssp EETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEE----E-TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEE----E-CCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEE
Confidence 89999999999999999999999999999988888776 2 358999999999999999999999999999999998
Q ss_pred ec
Q psy5280 196 PA 197 (202)
Q Consensus 196 ~~ 197 (202)
.+
T Consensus 381 ~a 382 (382)
T 1cs6_A 381 QA 382 (382)
T ss_dssp EC
T ss_pred eC
Confidence 74
No 46
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.69 E-value=5.5e-17 Score=112.21 Aligned_cols=95 Identities=19% Similarity=0.233 Sum_probs=75.4
Q ss_pred CCCeEEeccC---CeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 102 QAPRFLNQEH---DTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 102 ~~P~fi~~~~---~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
.+|.|+..+. ....+.+|+++.|.|.+.|.|.|.+.|+|++..+....++...........|.|.++..+|+|.|+|
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 82 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 82 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEE
Confidence 4677775442 3347889999999999999999999999999998765432110112335689999999999999999
Q ss_pred EEEeCCceEEEEEEEEee
Q psy5280 179 LASNEHGTARQRVSSGNP 196 (202)
Q Consensus 179 ~a~N~~G~~~~~~~L~V~ 196 (202)
.|.|..|...+.+.|.|.
T Consensus 83 ~a~N~~g~~~~~~~l~Vv 100 (100)
T 3caf_A 83 VVENEYGSINHTYHLDVV 100 (100)
T ss_dssp EEEETTEEEEEEEEEEEC
T ss_pred EEEeCCCEEEEEEEEEEC
Confidence 999999999999888873
No 47
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.69 E-value=3.4e-16 Score=131.86 Aligned_cols=133 Identities=17% Similarity=0.191 Sum_probs=103.0
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc------------eeeeccccccCCCCC-CC-----------------CCCCeE
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS------------FYFPRDFDLERPPRE-GY-----------------AQAPRF 106 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~------------~~~~~~~~ie~~~~~-~~-----------------~~~P~f 106 (202)
..|.+.+.+.+.+.|+++|..+..... .+....+..++.|.| |. ..+|.|
T Consensus 232 l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~ 311 (395)
T 1bih_A 232 IYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKY 311 (395)
T ss_dssp EEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEE
T ss_pred EEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCcc
Confidence 448888888889999999988754211 233344444555544 21 135667
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
...+.+...+.+|+++.|.|.+.|.|.|.+.|++++..+..+ ++.+ . ...|.|.++..+|+|.|+|.|.|..|.
T Consensus 312 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~----~-~~~L~i~~~~~~d~G~Y~C~a~N~~G~ 385 (395)
T 1bih_A 312 EQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATV----T-DSGLVIKGVKNGDKGYYGCRATNEHGD 385 (395)
T ss_dssp EECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEE----E-TTEEEESSCCSTTCEEEEEEEEETTEE
T ss_pred ccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEE----E-CCEEEEeeCCcccCEEEEEEEEccCCC
Confidence 666666348899999999999999999999999999998764 5555 2 238999999999999999999999999
Q ss_pred EEEEEEEEe
Q psy5280 187 ARQRVSSGN 195 (202)
Q Consensus 187 ~~~~~~L~V 195 (202)
..+++.|.|
T Consensus 386 ~~~~~~l~V 394 (395)
T 1bih_A 386 KYFETLVQV 394 (395)
T ss_dssp EEEEEEEEE
T ss_pred ceEEEEEEE
Confidence 999999887
No 48
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.68 E-value=3.5e-16 Score=109.69 Aligned_cols=82 Identities=17% Similarity=0.300 Sum_probs=68.7
Q ss_pred ecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy5280 117 IKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTARQRVS 192 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 192 (202)
..++.+.|.|.+.|.|.|.++|+|+|..+..+.++.+...... .+.|.|.++..+|+|.|+|.|.|..|..++++.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 3578899999999999999999999999988766433221111 345999999999999999999999999999999
Q ss_pred EEeecC
Q psy5280 193 SGNPAQ 198 (202)
Q Consensus 193 L~V~~~ 198 (202)
|.|...
T Consensus 94 l~V~~~ 99 (103)
T 1wwb_X 94 AHFMGW 99 (103)
T ss_dssp ECCSCC
T ss_pred EEECCC
Confidence 998764
No 49
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.68 E-value=1.5e-16 Score=121.72 Aligned_cols=135 Identities=18% Similarity=0.167 Sum_probs=99.1
Q ss_pred eeee-ecCCCC-CeeeecCCCeecCC--C--------CceeeeccccccCCCCC-CC-----------------------
Q psy5280 57 TQEK-LNPERP-KFEPYLPPGVPFHP--D--------KSFYFPRDFDLERPPRE-GY----------------------- 100 (202)
Q Consensus 57 ~~~~-~~~~~~-~~~~w~~~g~~~~p--~--------~~~~~~~~~~ie~~~~~-~~----------------------- 100 (202)
..|. ..+.+. +.+.|+++|.++.. + ...+.+..+..++.|.| |.
T Consensus 28 L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~ 107 (201)
T 3s97_C 28 LLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPER 107 (201)
T ss_dssp ECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCS
T ss_pred EeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeecccc
Confidence 4466 557777 78999999977531 1 11122244444555543 20
Q ss_pred ---CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEE
Q psy5280 101 ---AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 101 ---~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
..+|.+.....+. .+.+|+.+.|.|.+.|.|.|.+.|++++..+....++. .....|.|.++..+|+|.|+
T Consensus 108 ~~~~~~p~~~~~~~~~-~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~ 181 (201)
T 3s97_C 108 TTKPYPADIVVQFKDV-YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEIS-----TSGAVLKIFNIQLEDEGIYE 181 (201)
T ss_dssp SCCCEEEEEEEECCCE-EEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEE-----TTTTEEEECSCCGGGCEEEE
T ss_pred ccCCCCCceEecCCce-EEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeec-----CCCCEEEEccCChhhCEEEE
Confidence 1234455445444 78899999999999999999999999999777554332 34568999999999999999
Q ss_pred EEEEeCCceEEEEEEEEeec
Q psy5280 178 ALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 178 C~a~N~~G~~~~~~~L~V~~ 197 (202)
|.|.|..|....++.|.|.+
T Consensus 182 C~a~n~~g~~~~~~~l~V~a 201 (201)
T 3s97_C 182 CEAENIRGKDKHQARIYVQA 201 (201)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEecCCceeeeEEEEEeC
Confidence 99999999999999999874
No 50
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.68 E-value=4.4e-16 Score=109.73 Aligned_cols=94 Identities=13% Similarity=-0.004 Sum_probs=75.1
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecC---CceEEEeCCEEccc---CCcEEEEEee-----CCeEEEEEccCCCC
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPK---PKVSFYFNDELIEM---GGRYDSSYTR-----NGQATLFINKMLDR 171 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~---P~i~W~k~g~~l~~---~~r~~i~~~~-----~~~~~L~I~~~~~~ 171 (202)
.|.|+..+.+. .+.+|+++.|.|.+.|.|. |.|.|+|++..... ..++.+.... .....|.|.++..+
T Consensus 4 ~p~f~~~p~~~-~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 4 IGLFVMRPQDG-EVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCSCSBCCCCE-EEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred ccEEEeCCCcE-EEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 57888888887 8999999999999999999 99999998732221 2345442110 02468999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEeec
Q psy5280 172 DVGMYEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
|+|.|.|.|.|..|..++.+.|.|.+
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~~ 108 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVHE 108 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cCEEEEEEEecCCCceEEEEEEEEeC
Confidence 99999999999999999999999864
No 51
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.68 E-value=4.9e-16 Score=117.67 Aligned_cols=129 Identities=14% Similarity=0.101 Sum_probs=96.9
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc------------eeeeccccccCCCCC-C-----------------CCCCCeE
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS------------FYFPRDFDLERPPRE-G-----------------YAQAPRF 106 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~------------~~~~~~~~ie~~~~~-~-----------------~~~~P~f 106 (202)
..|.+.+.+.+.+.|+++|..+..... .+....+..++.|.| | ...+|.+
T Consensus 22 l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~ 101 (182)
T 1rhf_A 22 LNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFF 101 (182)
T ss_dssp EEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSCEE
T ss_pred EEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCCeE
Confidence 457788888888999999998765422 122234444444443 1 1146777
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCC-ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKP-KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
...+.+. .+.+|+.+.|.|.+.|.|.| .+.|++++..+..... ....|.|.++ +|+|.|+|.|.|..|
T Consensus 102 ~~~~~~~-~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~--------~~~~L~i~~~--~d~G~Y~C~a~N~~g 170 (182)
T 1rhf_A 102 TVEPKDL-AVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP--------SPSVLNVTGV--TQSTMFSCEAHNLKG 170 (182)
T ss_dssp EECCCCE-EECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE--------SSEEEEECCC--SSCEEEEEEEEETTE
T ss_pred EecCcce-EecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC--------CceEEEEecc--ccCeEEEEEEECCCC
Confidence 7767666 88999999999999999999 9999999998865321 3678999988 589999999999999
Q ss_pred eEEE-EEEEEee
Q psy5280 186 TARQ-RVSSGNP 196 (202)
Q Consensus 186 ~~~~-~~~L~V~ 196 (202)
...+ ++.|.|.
T Consensus 171 ~~~s~~~~l~Vk 182 (182)
T 1rhf_A 171 LASSRTATVHLQ 182 (182)
T ss_dssp EEECCCEEEEEC
T ss_pred CcccceEEEEeC
Confidence 8864 7777763
No 52
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=1.4e-15 Score=115.45 Aligned_cols=137 Identities=16% Similarity=0.169 Sum_probs=100.7
Q ss_pred eeeeecCCCCC--eeeecCCCeecCCCCc-----eeeeccccccCCCCC-C-------------CCCCCeEEeccCCeeE
Q psy5280 57 TQEKLNPERPK--FEPYLPPGVPFHPDKS-----FYFPRDFDLERPPRE-G-------------YAQAPRFLNQEHDTQY 115 (202)
Q Consensus 57 ~~~~~~~~~~~--~~~w~~~g~~~~p~~~-----~~~~~~~~ie~~~~~-~-------------~~~~P~fi~~~~~~~~ 115 (202)
..|.+.+.+.+ .+.|+++|..+..... .+... ..++.|.| | ...+|.+...+... .
T Consensus 18 l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~~~~~~~l~V~~~P~~~~~~~~~-~ 94 (184)
T 3b5h_A 18 LTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSE-H 94 (184)
T ss_dssp EEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEESTTSCEEEEEECCSCCCEESCSEE-E
T ss_pred EEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEe--chhhCeEEEEEEECCcCcEEEEEEecCCceeecCCCc-E
Confidence 55777776655 8999999998765321 22222 24455543 2 12467776666555 7
Q ss_pred EecCCeEEEEEEEEeec-CCceEEEe----CCEEccc--CCcEEEEEeeCCeEEEEEccCC-CCCCEEEEEEEEeCCceE
Q psy5280 116 GIKNENSSLFWFVYGYP-KPKVSFYF----NDELIEM--GGRYDSSYTRNGQATLFINKML-DRDVGMYEALASNEHGTA 187 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~P-~P~i~W~k----~g~~l~~--~~r~~i~~~~~~~~~L~I~~~~-~~D~G~Y~C~a~N~~G~~ 187 (202)
+.+|+.+.|.|.+.|.| .|.+.|++ +...+.. ..++.+.. ......|.|.++. ..|+|.|+|.|.|..|..
T Consensus 95 ~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~ 173 (184)
T 3b5h_A 95 INEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSS-SQGRSELHIENLNMEADPGQYRCNGTSSKGSD 173 (184)
T ss_dssp ECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEE-ETTEEEEEECSCCTTTSSEEEEEEEEETTEEE
T ss_pred EcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEe-cCCeeEEEEeeccccccCceEEEEEEeCCCcc
Confidence 88999999999999999 79999999 4444433 25676632 3446789999999 899999999999999999
Q ss_pred EEEEEEEeec
Q psy5280 188 RQRVSSGNPA 197 (202)
Q Consensus 188 ~~~~~L~V~~ 197 (202)
.+.+.|.|.+
T Consensus 174 ~~~~~l~V~~ 183 (184)
T 3b5h_A 174 QAIITLRVRS 183 (184)
T ss_dssp EEEEEEEEC-
T ss_pred eEEEEEEEec
Confidence 9999998874
No 53
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.67 E-value=1.1e-16 Score=112.14 Aligned_cols=93 Identities=17% Similarity=0.230 Sum_probs=72.0
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+....++.+ ......|.|.++..+|+|.|+|.|.
T Consensus 9 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~a~ 84 (108)
T 3kvq_A 9 VAPTITGNLENQ-TTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVL---KDGNRNLTIRRVRKEDEGLYTCQAC 84 (108)
T ss_dssp --CCCBSCCCCE-EEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEE---ETTTTEEEECSCCGGGCEEEEEEEC
T ss_pred CCCceecCCCCe-EEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEE---eCCCcEEEEeecCcccCEEEEEEEE
Confidence 467887777777 899999999999999999999999999998877666654 2446789999999999999999999
Q ss_pred eCCceEEEEEEEEeecC
Q psy5280 182 NEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~~ 198 (202)
|..|.....+.|.|...
T Consensus 85 n~~g~~~~~~~l~V~~~ 101 (108)
T 3kvq_A 85 SVLGCAKVEAFFIIEGA 101 (108)
T ss_dssp ----CEEEEEEEEEEC-
T ss_pred eCCCceEEEEEEEEeCC
Confidence 99999999999998764
No 54
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.67 E-value=6.1e-16 Score=117.84 Aligned_cols=134 Identities=12% Similarity=0.031 Sum_probs=99.2
Q ss_pred eeeeecCCC-CCeeeecC-CCeecCCCC------------ceeeeccccccCCCCC-CC-----------------CCCC
Q psy5280 57 TQEKLNPER-PKFEPYLP-PGVPFHPDK------------SFYFPRDFDLERPPRE-GY-----------------AQAP 104 (202)
Q Consensus 57 ~~~~~~~~~-~~~~~w~~-~g~~~~p~~------------~~~~~~~~~ie~~~~~-~~-----------------~~~P 104 (202)
..|.+.+.+ .+.+.|++ +|..+.... ..+....+..++.|.| |. ..+|
T Consensus 22 l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p 101 (191)
T 1epf_A 22 FLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKL 101 (191)
T ss_dssp EEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEECCS
T ss_pred EEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEeecCc
Confidence 558778876 67899999 998876321 1222344445555544 21 1456
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc--CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM--GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~--~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
.+...+... .+.+|+++.|.|.+.|.|.|.+.|++++..+.. ..++.+ ..++.|.|.++..+|+|.|+|.|.|
T Consensus 102 ~~~~~~~~~-~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n 176 (191)
T 1epf_A 102 MFKNAPTPQ-EFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIV----LSNNYLQIRGIKKTDEGTYRCEGRI 176 (191)
T ss_dssp EEEECCSSE-ECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEE----CTTSCEEETTCCGGGCEEEEEEEEE
T ss_pred eEecCCCcE-eecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEE----ecCCeEEECCCChhhCEEEEEEEEE
Confidence 776666666 788999999999999999999999999999864 335555 3455899999999999999999999
Q ss_pred CCceEEEEEEEEe
Q psy5280 183 EHGTARQRVSSGN 195 (202)
Q Consensus 183 ~~G~~~~~~~L~V 195 (202)
..|.......+.|
T Consensus 177 ~~~~~~~~~~i~v 189 (191)
T 1epf_A 177 LARGEINFKDIQV 189 (191)
T ss_dssp GGGTEEEEEEEEE
T ss_pred ecceeEEEEEEEE
Confidence 9976665555554
No 55
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.67 E-value=2.3e-16 Score=107.12 Aligned_cols=82 Identities=16% Similarity=0.161 Sum_probs=68.6
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
+.+. .+.+|+++.|.|.+.| |.|.|+|+|||..|..+.++.+.. ....+.|.|.++..+|+|.|+|.|.| .+.
T Consensus 3 lt~v-~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~ 75 (84)
T 2lu7_A 3 MTRV-RSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQ-AGARQVLRVQGARSGDAGEYLCDAPQ----DSR 75 (84)
T ss_dssp CCCE-EECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEE-CSSCEEEEESSCSSTTCEEEEEECTT----TCE
T ss_pred CeEE-EEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEee-cCCeEEEEecCCCCcccEEEEEEECC----EEE
Confidence 3455 8889999999999976 999999999999999988888744 34567899999999999999998855 456
Q ss_pred EEEEEeecC
Q psy5280 190 RVSSGNPAQ 198 (202)
Q Consensus 190 ~~~L~V~~~ 198 (202)
++.|.|..|
T Consensus 76 ~a~l~V~eP 84 (84)
T 2lu7_A 76 IFLVSVEEP 84 (84)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEECC
Confidence 677888754
No 56
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.67 E-value=2.4e-15 Score=114.25 Aligned_cols=137 Identities=14% Similarity=0.143 Sum_probs=99.9
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc--------eeeeccccccCCCCC-CCC----------------CCCeEEeccC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS--------FYFPRDFDLERPPRE-GYA----------------QAPRFLNQEH 111 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~--------~~~~~~~~ie~~~~~-~~~----------------~~P~fi~~~~ 111 (202)
..|.+.+.+.+.+.|+++|..+..... .+....+..++.|.| |.+ .+|.+.. ..
T Consensus 24 l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~-~~ 102 (192)
T 2va4_A 24 FSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQ-LK 102 (192)
T ss_dssp EECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEE-EC
T ss_pred EEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEccCcccc-cC
Confidence 558888888889999999988765322 122344445555544 211 2344332 23
Q ss_pred CeeEEecCCeEEEEEEEEeecCCceEEEeC--CEEccc-----CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 112 DTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DELIEM-----GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 112 ~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~l~~-----~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
.. .+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. ..++.+. .......|.|.++..+|+|.|+|.|.|..
T Consensus 103 ~~-~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 180 (192)
T 2va4_A 103 NE-TTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVK-GQHGSSSLHIKDVKLSDSGRYDCEAASRI 180 (192)
T ss_dssp CE-EECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEE-EETTEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred cc-eEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEe-eccCceEEEEecCCcccCEEEEEEEEecC
Confidence 34 677899999999999999999999998 666653 3445542 22446789999999999999999999999
Q ss_pred ceEEEEEEEEee
Q psy5280 185 GTARQRVSSGNP 196 (202)
Q Consensus 185 G~~~~~~~L~V~ 196 (202)
|....++.|.|.
T Consensus 181 g~~~~~~~l~V~ 192 (192)
T 2va4_A 181 GGHQKSMYLDIE 192 (192)
T ss_dssp CEEEEEEEEEEC
T ss_pred CceEEEEEEEeC
Confidence 999999988874
No 57
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.67 E-value=4.1e-16 Score=131.56 Aligned_cols=135 Identities=17% Similarity=0.159 Sum_probs=104.1
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc-------eeeeccccccCCCCC-CC----------------CCCCeEEeccCC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS-------FYFPRDFDLERPPRE-GY----------------AQAPRFLNQEHD 112 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~-------~~~~~~~~ie~~~~~-~~----------------~~~P~fi~~~~~ 112 (202)
..|.+.+.+.+.+.|+++|..+..... .+....+..++.|.| |. ..+|.|+..+.+
T Consensus 242 l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~ 321 (404)
T 3p3y_A 242 LECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKN 321 (404)
T ss_dssp EECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCC
T ss_pred EEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCc
Confidence 447778888889999999988755432 122344444555544 21 136777777777
Q ss_pred eeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC---cEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 113 TQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG---RYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 113 ~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~---r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
. .+.+|+.+.|.|.+.|.|.|.+.|+++|..+.... +... ....|.|.++..+|+|.|+|.|.|..|...+
T Consensus 322 ~-~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 395 (404)
T 3p3y_A 322 L-ILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREV-----AGDTIIFRDTQISSRAVYQCNTSNEHGYLLA 395 (404)
T ss_dssp E-EECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEE-----ETTEEEESSCCSSCCCEEEEEEEETTEEEEE
T ss_pred c-eeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEe-----cCCEEEEeecCHHHCEEEEEEEEeCCCcEEE
Confidence 6 88899999999999999999999999999997643 2222 2358999999999999999999999999999
Q ss_pred EEEEEeec
Q psy5280 190 RVSSGNPA 197 (202)
Q Consensus 190 ~~~L~V~~ 197 (202)
.+.|.|.+
T Consensus 396 ~~~l~V~d 403 (404)
T 3p3y_A 396 NAFVSVLD 403 (404)
T ss_dssp EEEEEEC-
T ss_pred EEEEEEEe
Confidence 99998864
No 58
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.66 E-value=6.6e-16 Score=126.32 Aligned_cols=135 Identities=14% Similarity=0.099 Sum_probs=96.2
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc----------eeeeccccccCCCCC-CC--------------------CCCCe
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS----------FYFPRDFDLERPPRE-GY--------------------AQAPR 105 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~----------~~~~~~~~ie~~~~~-~~--------------------~~~P~ 105 (202)
..|.+.+.+.+.+.|+++|..+..... .+....+..++.|.| |. ..+|.
T Consensus 128 l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~ 207 (304)
T 2yd9_A 128 MLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPR 207 (304)
T ss_dssp ECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEE
T ss_pred EEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCc
Confidence 337778888889999999988654211 122234444444443 10 13566
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
|...+.+. .+.+|+.+.|.|.+.|.|.|.+.|++++..+....++. .+...|.|.++ +|+|.|+|.|.|..|
T Consensus 208 ~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~-----~~~~~L~i~~~--~d~G~Y~C~a~N~~G 279 (304)
T 2yd9_A 208 FSILPMSH-EIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP-----VGRNVLELTDV--KDSANYTCVAMSSLG 279 (304)
T ss_dssp EEECCCCB-CCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC-----BSEEEEEECSC--CSCEEEEEEEEETTE
T ss_pred EEecCCce-EEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc-----CCcEEEEEccc--ccCEEEEEEEEeCCC
Confidence 66556655 78899999999999999999999999999997765432 23456777766 699999999999999
Q ss_pred eEEEEEEEEeecCC
Q psy5280 186 TARQRVSSGNPAQG 199 (202)
Q Consensus 186 ~~~~~~~L~V~~~~ 199 (202)
...+++.|.|....
T Consensus 280 ~~~~~~~l~V~~~~ 293 (304)
T 2yd9_A 280 VIEAVAQITVKSLP 293 (304)
T ss_dssp EEEEEEEEC-----
T ss_pred cEEEEEEEEEecCc
Confidence 99999999988653
No 59
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.66 E-value=7.6e-16 Score=124.56 Aligned_cols=137 Identities=15% Similarity=0.123 Sum_probs=98.8
Q ss_pred eeeecCCCCCeeeecCCCeecCCCC---------ceeeeccccccCCCCC-CCC------------------CCCeEEec
Q psy5280 58 QEKLNPERPKFEPYLPPGVPFHPDK---------SFYFPRDFDLERPPRE-GYA------------------QAPRFLNQ 109 (202)
Q Consensus 58 ~~~~~~~~~~~~~w~~~g~~~~p~~---------~~~~~~~~~ie~~~~~-~~~------------------~~P~fi~~ 109 (202)
.|.+.+.+.+.+.|+++|..+.... ..+....+..++.|.| |.+ .+|.+...
T Consensus 121 ~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~ 200 (291)
T 1qz1_A 121 VCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQAR 200 (291)
T ss_dssp CCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEES
T ss_pred EEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCccccc
Confidence 3777888888999999998764321 1122244444555543 211 23433322
Q ss_pred cC-CeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC----cEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 110 EH-DTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG----RYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 110 ~~-~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~----r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
.. ....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.+ ......|.|.++..+|+|.|+|.|.|..
T Consensus 201 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~---~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 277 (291)
T 1qz1_A 201 QSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIF---SDDSSELTIRNVDKNDEAEYVCIAENKA 277 (291)
T ss_dssp CSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEE---CTTSCEEEECSCCGGGCEEEEEEEEETT
T ss_pred ccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEE---cCCCcEEEEEecChhcCEEEEEEEEeCC
Confidence 21 12256679999999999999999999999999987654 4444 2345689999999999999999999999
Q ss_pred ceEEEEEEEEeec
Q psy5280 185 GTARQRVSSGNPA 197 (202)
Q Consensus 185 G~~~~~~~L~V~~ 197 (202)
|..+..+.|.|.+
T Consensus 278 G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 278 GEQDASIHLKVFA 290 (291)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CceEEEEEEEEEc
Confidence 9999999999875
No 60
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.66 E-value=7e-16 Score=112.64 Aligned_cols=81 Identities=19% Similarity=0.265 Sum_probs=69.4
Q ss_pred cCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEee------CCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy5280 118 KNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTR------NGQATLFINKMLDRDVGMYEALASNEHGTARQRV 191 (202)
Q Consensus 118 ~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~------~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~ 191 (202)
.+..+.|.|.+.|.|.|.|+|+|||..|..+.++.+.... ...++|.|.++...|+|.|+|.|.|..|.+++++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 5778999999999999999999999999988776553322 1246899999999999999999999999999999
Q ss_pred EEEeecC
Q psy5280 192 SSGNPAQ 198 (202)
Q Consensus 192 ~L~V~~~ 198 (202)
.|.|...
T Consensus 94 ~l~v~~~ 100 (126)
T 1he7_A 94 MAAFMDN 100 (126)
T ss_dssp EECCCSC
T ss_pred EEEEEcC
Confidence 9887643
No 61
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.65 E-value=3.9e-16 Score=126.30 Aligned_cols=139 Identities=14% Similarity=0.156 Sum_probs=95.6
Q ss_pred eeeecCCCCCeeeecCCCeecCCC--C-------ceeeeccccccCCCCC-CC------------------CCCCeEEec
Q psy5280 58 QEKLNPERPKFEPYLPPGVPFHPD--K-------SFYFPRDFDLERPPRE-GY------------------AQAPRFLNQ 109 (202)
Q Consensus 58 ~~~~~~~~~~~~~w~~~g~~~~p~--~-------~~~~~~~~~ie~~~~~-~~------------------~~~P~fi~~ 109 (202)
.|.+.+.+.+.+.|+++|..+... . ..+....+..++.|.| |. ..+|.+...
T Consensus 119 ~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~ 198 (291)
T 2wim_A 119 VCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMP 198 (291)
T ss_dssp CCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCS
T ss_pred EEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccC
Confidence 366677788889999999876531 1 1122233444444443 21 123333322
Q ss_pred cCC-eeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 110 EHD-TQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 110 ~~~-~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
... ...+.+|+.+.|.|.+.|.|.|.+.|++++..+..+.++.+ ......|.|.++..+|+|.|+|.|.|..|...
T Consensus 199 ~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 275 (291)
T 2wim_A 199 QKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL---KGSNTELTVRNIINSDGGPYVCRATNKAGEDE 275 (291)
T ss_dssp CSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEE---CSTTCEEEEESCCSTTCEEEEEEEEETTEEEE
T ss_pred cccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEE---cCCccEEEEeeCCcccCEEEEEEEEECCCcee
Confidence 221 12456799999999999999999999999999988877765 23457899999999999999999999999999
Q ss_pred EEEEEEeecCC
Q psy5280 189 QRVSSGNPAQG 199 (202)
Q Consensus 189 ~~~~L~V~~~~ 199 (202)
+++.|.|..+.
T Consensus 276 ~~~~l~v~~~~ 286 (291)
T 2wim_A 276 KQAFLQVFVQH 286 (291)
T ss_dssp EEEEEEC----
T ss_pred eeEEEEEEEec
Confidence 99999988654
No 62
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=3.8e-16 Score=115.91 Aligned_cols=81 Identities=17% Similarity=0.205 Sum_probs=69.6
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCC----------------------------EEc-ccCCcEEEEEeeCCeEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFND----------------------------ELI-EMGGRYDSSYTRNGQATLFI 165 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g----------------------------~~l-~~~~r~~i~~~~~~~~~L~I 165 (202)
.+.+|+++.|.|.+.|.|.|.|+|+|++ ..+ ....++.+.. ......|.|
T Consensus 29 ~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~-~~~~s~L~I 107 (139)
T 1gxe_A 29 VVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVET-TKDRSIFTV 107 (139)
T ss_dssp EESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEE-ETTEEEEEC
T ss_pred EEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEe-CCCEEEEEE
Confidence 8899999999999999999999999998 555 2445665532 234578999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEEEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
.++..+|+|.|+|.|.|.+|..++++.|.|.
T Consensus 108 ~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 108 EGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp SCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999999885
No 63
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=1.4e-16 Score=113.72 Aligned_cols=93 Identities=17% Similarity=0.138 Sum_probs=79.7
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc-CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM-GGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~-~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
..+|.|...+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+.. ..++.+ ...+.|.|.++..+|+|.|+|.
T Consensus 6 ~~pP~i~~~p~~~-~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~ 80 (118)
T 2eo9_A 6 SGPPVIRQGPVNQ-TVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQ----LENGVLQIRYAKLGDTGRYTCI 80 (118)
T ss_dssp CCSCCCSBCCCCE-EEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEE----EETTEEEEESCCGGGCCCEEEE
T ss_pred CCCCEEEcCCCCE-EEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEE----ccCCEEEEccCCcCCCEEEEEE
Confidence 3478888777777 899999999999999999999999999988864 455655 1235899999999999999999
Q ss_pred EEeCCceEEEEEEEEeecC
Q psy5280 180 ASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|..|.....+.|.|...
T Consensus 81 a~n~~g~~~~~~~l~V~~~ 99 (118)
T 2eo9_A 81 ASTPSGEATWSAYIEVQEF 99 (118)
T ss_dssp EECSSCEEEEECCEEEECC
T ss_pred EEcCCCcEEEEEEEEEEeC
Confidence 9999999999998888754
No 64
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.64 E-value=1.4e-15 Score=115.77 Aligned_cols=133 Identities=14% Similarity=0.063 Sum_probs=95.4
Q ss_pred eeeeecCCCCCeeeecC-CCeecCCCCc----------eeeeccccccCCCCC-CC-----------------CCCCeEE
Q psy5280 57 TQEKLNPERPKFEPYLP-PGVPFHPDKS----------FYFPRDFDLERPPRE-GY-----------------AQAPRFL 107 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~-~g~~~~p~~~----------~~~~~~~~ie~~~~~-~~-----------------~~~P~fi 107 (202)
..|.+.+.+. .+.|++ +|..+..... .+....+..++.|.| |. ..+|.+.
T Consensus 22 L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 100 (189)
T 2v44_A 22 FTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFR 100 (189)
T ss_dssp EEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred EEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEecCCcee
Confidence 5577777766 889999 7877654332 122344444555544 21 1356666
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc--CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM--GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~--~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
..+... .+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+ ...+.|.|.++..+|+|.|+|.|.|..|
T Consensus 101 ~~~~~~-~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 175 (189)
T 2v44_A 101 EVVSPQ-EFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAM----LANNNLQILNINKSDEGIYRCEGRVEAR 175 (189)
T ss_dssp SCCCSE-EEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEE----CTTSCEEETTCCGGGCEEEEEEEEETTT
T ss_pred ecCCcE-EEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEE----ecCCcEEEEEcCcccCeEEEEEEEcccc
Confidence 555565 788999999999999999999999999988763 556665 4456899999999999999999999998
Q ss_pred eEEEEEEEEe
Q psy5280 186 TARQRVSSGN 195 (202)
Q Consensus 186 ~~~~~~~L~V 195 (202)
.......+.|
T Consensus 176 ~~~~~~~~~v 185 (189)
T 2v44_A 176 GEIDFRDIIV 185 (189)
T ss_dssp TEEEEEEEEE
T ss_pred CceeeeeEEE
Confidence 7665544443
No 65
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.64 E-value=1.8e-15 Score=126.88 Aligned_cols=137 Identities=12% Similarity=0.123 Sum_probs=99.8
Q ss_pred eeeeecCCCCCeeeecCCCeecCC--------CCceeeeccccccCCC-CC-CCC----------------CCCeEEecc
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHP--------DKSFYFPRDFDLERPP-RE-GYA----------------QAPRFLNQE 110 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p--------~~~~~~~~~~~ie~~~-~~-~~~----------------~~P~fi~~~ 110 (202)
..|.+.+.+.+.+.|+++|..+.. ....+....+..++.| .| |.+ .+|.+
T Consensus 178 L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i---- 253 (347)
T 2ifg_A 178 LRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASV---- 253 (347)
T ss_dssp EEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEE----
T ss_pred EEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee----
Confidence 447788888889999999965321 1122233555666666 44 322 23332
Q ss_pred CCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEee------CCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 111 HDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTR------NGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 111 ~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~------~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
....+.+|+.+.|.|.+.|.|.|.|+|+|+|..+..+......... ...++|.|.++..+|+|.|+|.|.|..
T Consensus 254 -~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~ 332 (347)
T 2ifg_A 254 -QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPF 332 (347)
T ss_dssp -EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred -eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCC
Confidence 1113457999999999999999999999999999876655442222 125679999999999999999999999
Q ss_pred ceEEEEEEEEeecC
Q psy5280 185 GTARQRVSSGNPAQ 198 (202)
Q Consensus 185 G~~~~~~~L~V~~~ 198 (202)
|..++++.|.|..+
T Consensus 333 G~~~~~~~l~V~~~ 346 (347)
T 2ifg_A 333 GQASASIMAAFMDN 346 (347)
T ss_dssp EEEEEEEEECSCCC
T ss_pred CceeeEEEEEecCC
Confidence 99999999988754
No 66
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.64 E-value=1.5e-15 Score=119.76 Aligned_cols=142 Identities=13% Similarity=0.097 Sum_probs=98.4
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc-----------eeeeccccccCCCCC-CC--------------------CCCC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS-----------FYFPRDFDLERPPRE-GY--------------------AQAP 104 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~-----------~~~~~~~~ie~~~~~-~~--------------------~~~P 104 (202)
..|.+.+.+.+.+.|+++|..+..... .+.+..+..++.|.| |. ..+|
T Consensus 35 L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~ 114 (241)
T 3grw_A 35 FRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRP 114 (241)
T ss_dssp EECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCC
T ss_pred EEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccCCCCc
Confidence 447778888889999999988654221 122344455555544 21 1234
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEe----CCEEcccCCcEEEEEe-------eCCeEEEEEccCCCCCC
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYF----NDELIEMGGRYDSSYT-------RNGQATLFINKMLDRDV 173 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k----~g~~l~~~~r~~i~~~-------~~~~~~L~I~~~~~~D~ 173 (202)
.++........+.+|+.+.|.|.+.|.|.|.+.|++ ++..+........... ......|.|.++..+|+
T Consensus 115 ~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 194 (241)
T 3grw_A 115 ILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDG 194 (241)
T ss_dssp EEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGC
T ss_pred eeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccC
Confidence 444333333378889999999999999999999999 8877765433211000 01246799999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 174 GMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 174 G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|+|.|.|..|..+.++.|.|..+
T Consensus 195 G~Y~C~a~N~~g~~~~~~~l~V~~~ 219 (241)
T 3grw_A 195 GEYLCRATNFIGVAEKAFWLSVHGP 219 (241)
T ss_dssp EEEEEEEECSSCEEEEEEEEEC---
T ss_pred cEEEEEEecCcceEEEEEEEEecCC
Confidence 9999999999999999999998755
No 67
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.64 E-value=4.3e-16 Score=120.22 Aligned_cols=136 Identities=16% Similarity=0.135 Sum_probs=95.7
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCC-------------ceeee----ccccccCCCCC-CCC-----------------
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDK-------------SFYFP----RDFDLERPPRE-GYA----------------- 101 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~-------------~~~~~----~~~~ie~~~~~-~~~----------------- 101 (202)
..|.+.+.+.+.+.|+++|..+.... ..++. ..+..++.|.| |.+
T Consensus 29 l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~ 108 (212)
T 2v9r_A 29 LNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVA 108 (212)
T ss_dssp ECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCceeecceEEEEE
Confidence 33777777888999999998865321 11110 12233444444 210
Q ss_pred -CCCeEEeccCCeeEEecCCeEEEEEEE-EeecCCceEEEeCCEEcccCC-cEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 102 -QAPRFLNQEHDTQYGIKNENSSLFWFV-YGYPKPKVSFYFNDELIEMGG-RYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 102 -~~P~fi~~~~~~~~v~~G~~v~L~C~v-~G~P~P~i~W~k~g~~l~~~~-r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
.++.+...+.+. .+.+|+.+.|.|.+ .|.|.|.+.|++++..+.... ++.+ ....|.|.++..+|+|.|+|
T Consensus 109 ~~~~~~~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C 182 (212)
T 2v9r_A 109 ILRDDFRQNPSDV-MVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITI-----RGGKLMITYTRKSDAGKYVC 182 (212)
T ss_dssp EECSSCSBCCCCE-EEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEE-----ETTEEEESSCCGGGCEEEEE
T ss_pred eccccceeCCCce-EecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEc-----cCCeEEEeeCCHhhCeeEEE
Confidence 123333344455 78899999999999 999999999999999987643 3433 23589999999999999999
Q ss_pred EEEeCCceEEEE-EEEEeecC
Q psy5280 179 LASNEHGTARQR-VSSGNPAQ 198 (202)
Q Consensus 179 ~a~N~~G~~~~~-~~L~V~~~ 198 (202)
.|.|..|...+. +.|.|...
T Consensus 183 ~a~N~~g~~~s~~~~l~V~~~ 203 (212)
T 2v9r_A 183 VGTNMVGERESEVAELTVLER 203 (212)
T ss_dssp EEEETTEEEECCCEEEEEEC-
T ss_pred EEecccCceecceEEEEEEeC
Confidence 999999987654 78887654
No 68
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.64 E-value=2.1e-15 Score=118.14 Aligned_cols=130 Identities=8% Similarity=-0.017 Sum_probs=97.1
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCC-ceeeeccccccCCCCC-CC--------------------------------CC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDK-SFYFPRDFDLERPPRE-GY--------------------------------AQ 102 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~-~~~~~~~~~ie~~~~~-~~--------------------------------~~ 102 (202)
..|.+.+.+.+.+.|+++|..+.... ..+.+..+..++.|.| |. ..
T Consensus 38 L~C~~~~~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~ 117 (218)
T 3k0w_A 38 LCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSES 117 (218)
T ss_dssp EECEETTTTSSEEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCS
T ss_pred EEeeecCCCCCEEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCC
Confidence 44778888888999999999875432 2233344445544443 10 01
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
+|.+...+... .+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ...|.|.++..+|+|.|+|.|.|
T Consensus 118 ~p~~~~~~~~~-~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~n 186 (218)
T 3k0w_A 118 KLQICVEPTSQ-KLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET----------KKLYMVPYVDLEHQGTYWCHVYN 186 (218)
T ss_dssp SCEEEECCCCE-EECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC----------SSEEEESSCCGGGCEEEEEEEEC
T ss_pred CceEEECCCce-eecCCCcEEEEEEecccCCCeEEEEECCEECCCCC----------CCEEEEeecChhcCEEEEEEEEc
Confidence 15666566666 88899999999999999999999999999886532 35799999999999999999999
Q ss_pred CCce-EEEEEEEEeec
Q psy5280 183 EHGT-ARQRVSSGNPA 197 (202)
Q Consensus 183 ~~G~-~~~~~~L~V~~ 197 (202)
..|. .+..+.|.|..
T Consensus 187 ~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 187 DRDSQDSKKVEIIIDE 202 (218)
T ss_dssp SSCEEECCCEEEEECC
T ss_pred CCCCceeeeEEEEEeC
Confidence 9998 45567777764
No 69
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.63 E-value=7.7e-16 Score=106.03 Aligned_cols=87 Identities=14% Similarity=0.109 Sum_probs=68.2
Q ss_pred CCeEEeccCCe-eEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 103 APRFLNQEHDT-QYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 103 ~P~fi~~~~~~-~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
|+.|+.+..+. ..+.+|+++.|.|.+.| |.|.++|+|||..|..+.++.+.. .+..+.|.|.++..+|+|.|+|.|.
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~-~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLEN-EGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEE-ETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEe-cCCeEEEEeCCCChhhcEEEEEEEc
Confidence 44555544444 13457999999999966 999999999999999888888743 3556789999999999999999987
Q ss_pred eCCceEEEEEEEEe
Q psy5280 182 NEHGTARQRVSSGN 195 (202)
Q Consensus 182 N~~G~~~~~~~L~V 195 (202)
|. ++++.|+|
T Consensus 82 n~----~~~~~ltV 91 (91)
T 2lvc_A 82 DE----CAYFTVTI 91 (91)
T ss_dssp SC----EEEEEEEC
T ss_pred ce----EEEEEEEC
Confidence 64 55566654
No 70
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.63 E-value=1.2e-15 Score=118.99 Aligned_cols=142 Identities=13% Similarity=0.065 Sum_probs=99.4
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc-----------eeeeccccccCCCCC-CC--------------------CCCC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS-----------FYFPRDFDLERPPRE-GY--------------------AQAP 104 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~-----------~~~~~~~~ie~~~~~-~~--------------------~~~P 104 (202)
..|.+.+.+.+.+.|+++|..+..... .+.+..+..++.|.| |. ..+|
T Consensus 39 L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p 118 (231)
T 3ojm_B 39 FRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRP 118 (231)
T ss_dssp EECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCC
T ss_pred EEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcCCCCCC
Confidence 447777788888999999998754321 122344455555544 21 1234
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEe----CCEEcccCCcE--EEEEe----eCCeEEEEEccCCCCCCE
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYF----NDELIEMGGRY--DSSYT----RNGQATLFINKMLDRDVG 174 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k----~g~~l~~~~r~--~i~~~----~~~~~~L~I~~~~~~D~G 174 (202)
.++........+.+|+.+.|.|.+.|.|.|.+.|++ ++..+...... ..... ......|.|.++..+|+|
T Consensus 119 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 198 (231)
T 3ojm_B 119 ILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAG 198 (231)
T ss_dssp EECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCE
T ss_pred ceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCe
Confidence 443332233388899999999999999999999999 78777543321 11111 112357999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEeecC
Q psy5280 175 MYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 175 ~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
.|+|.|.|..|..+.++.|.|...
T Consensus 199 ~Y~C~a~n~~g~~~~~~~l~V~~~ 222 (231)
T 3ojm_B 199 EYICKVSNYIGQANQSAWLTVLPK 222 (231)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEEeccceEeeEEEEEEecC
Confidence 999999999999999999998754
No 71
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.63 E-value=1.9e-15 Score=123.81 Aligned_cols=136 Identities=13% Similarity=0.062 Sum_probs=98.7
Q ss_pred cCCCCCeeeecCCCeecCCCCce-------eeeccccccCCCCC-CC-------------------------CCCCeEEe
Q psy5280 62 NPERPKFEPYLPPGVPFHPDKSF-------YFPRDFDLERPPRE-GY-------------------------AQAPRFLN 108 (202)
Q Consensus 62 ~~~~~~~~~w~~~g~~~~p~~~~-------~~~~~~~ie~~~~~-~~-------------------------~~~P~fi~ 108 (202)
.+.+.+.+.|+++|.++.++... +....+..++.|.| |. ..+|.|+.
T Consensus 134 ~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~ 213 (315)
T 1itb_B 134 ENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 213 (315)
T ss_dssp TTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECS
T ss_pred CCCCCCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEec
Confidence 67788899999999997543211 22233333444432 10 24677765
Q ss_pred ccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEE----Eee-------CCeEEEEEccCCCCC-CEEE
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSS----YTR-------NGQATLFINKMLDRD-VGMY 176 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~----~~~-------~~~~~L~I~~~~~~D-~G~Y 176 (202)
.+.+...+.+|+.+.|.|.+.|.|.|.+.|+++|..+..+...... ... ...+.|.|.++..+| +|.|
T Consensus 214 ~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y 293 (315)
T 1itb_B 214 PANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPF 293 (315)
T ss_dssp CCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCE
T ss_pred CCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCce
Confidence 5554447789999999999999999999999999999875432210 000 013489999999999 9999
Q ss_pred EEEEEeCCceEEEEEEEEeec
Q psy5280 177 EALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 177 ~C~a~N~~G~~~~~~~L~V~~ 197 (202)
+|.|.|..|...+++.|.|.+
T Consensus 294 ~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 294 TCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp EEEEECTTCCEEEEEEEECCC
T ss_pred EEEEecCCCceeEEEEEEecC
Confidence 999999999999999998864
No 72
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.63 E-value=5.2e-15 Score=120.94 Aligned_cols=146 Identities=14% Similarity=0.174 Sum_probs=98.6
Q ss_pred ccCCeeeeccce----------eeeeecCCCCCeeeecCCCeecCCCC-----------ceeeeccccc-cCCCCC-CCC
Q psy5280 45 AQAPRFLNQEHD----------TQEKLNPERPKFEPYLPPGVPFHPDK-----------SFYFPRDFDL-ERPPRE-GYA 101 (202)
Q Consensus 45 ~~~p~f~~~~~~----------~~~~~~~~~~~~~~w~~~g~~~~p~~-----------~~~~~~~~~i-e~~~~~-~~~ 101 (202)
..+|.|+..+.+ ..|.+.+.+.+.+.|+++|..+.... ..+.+..+.. ++.|.| |.+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 83 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVA 83 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEE
Confidence 346777655443 44778888888999999998764321 1222344444 555554 210
Q ss_pred -----------------------CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC---cEEEEE
Q psy5280 102 -----------------------QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG---RYDSSY 155 (202)
Q Consensus 102 -----------------------~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~---r~~i~~ 155 (202)
..|.+...+... .+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+. ++..
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~-~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~-- 160 (304)
T 2yd9_A 84 QNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLK-VVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ-- 160 (304)
T ss_dssp ECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCE-EEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE--
T ss_pred ECCCCeEEEEEEEEEeccccCCCCCCeeecCCccE-EEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe--
Confidence 116666666666 88899999999999999999999999999987542 3333
Q ss_pred eeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEE-EEEEe
Q psy5280 156 TRNGQATLFINKMLDRDVGMYEALASNEHGTARQR-VSSGN 195 (202)
Q Consensus 156 ~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~-~~L~V 195 (202)
...+.|.|.++...|+|.|+|.|.|..|..... +.|.|
T Consensus 161 --~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v 199 (304)
T 2yd9_A 161 --LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYV 199 (304)
T ss_dssp --CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEE
Confidence 345689999999999999999999999987633 44444
No 73
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.63 E-value=1.4e-16 Score=124.96 Aligned_cols=132 Identities=7% Similarity=-0.007 Sum_probs=84.7
Q ss_pred eee---eecCCCCCeeeecCCCeecCC---------------------------CCceeeeccccccCCCCC-CC-----
Q psy5280 57 TQE---KLNPERPKFEPYLPPGVPFHP---------------------------DKSFYFPRDFDLERPPRE-GY----- 100 (202)
Q Consensus 57 ~~~---~~~~~~~~~~~w~~~g~~~~p---------------------------~~~~~~~~~~~ie~~~~~-~~----- 100 (202)
..| .+.+.+.+.+.|+|+|..... +...+.+..+..++.|.| |.
T Consensus 13 L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 92 (203)
T 4fa8_A 13 LTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGE 92 (203)
T ss_dssp EEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred EEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeEEEEEEEcCC
Confidence 456 457788889999998854211 001122344555566654 21
Q ss_pred -----------CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcc----cCCcEEEEEeeCCeEEEEE
Q psy5280 101 -----------AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIE----MGGRYDSSYTRNGQATLFI 165 (202)
Q Consensus 101 -----------~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~----~~~r~~i~~~~~~~~~L~I 165 (202)
..||.+...+.+. .+.+|+++.|.|.+.|.|.|.|+|++++..+. .+.++.+. .+.....|.|
T Consensus 93 g~~~~~~~l~V~~p~~~~~~~~~~-~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~-~~g~l~il~i 170 (203)
T 4fa8_A 93 TEVTKQEHLSVVKPLTLSVHSERS-QFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKE-KDGSLSVAVD 170 (203)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEEEC-CSSCSCCEEEEEEEEEESCCEEEECCC------------CCEEC-TTSCEEEEEE
T ss_pred CcEEEEEEEEecCCceeeecceeE-EEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEe-CCCCEEEEEE
Confidence 1345555555555 77889999999999999999999998765443 23445441 1111234566
Q ss_pred ccCCCCCCEEEEEEEEeCCceEEEE
Q psy5280 166 NKMLDRDVGMYEALASNEHGTARQR 190 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~~~~ 190 (202)
.++..+|+|.|+|+|.|.+|.++..
T Consensus 171 ~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 171 LSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp EEECSSCCCCEEEEEESSSCEEEEE
T ss_pred CCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 7899999999999999999998754
No 74
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.63 E-value=2.3e-15 Score=109.87 Aligned_cols=94 Identities=13% Similarity=0.078 Sum_probs=75.9
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEee---cCCceEEEeCCEE-cc--cCCcEEEEEe-eC----CeEEEEEccCCCC
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGY---PKPKVSFYFNDEL-IE--MGGRYDSSYT-RN----GQATLFINKMLDR 171 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~---P~P~i~W~k~g~~-l~--~~~r~~i~~~-~~----~~~~L~I~~~~~~ 171 (202)
.|.|+.++.+. .+.+|+++.|.|.+.|. |.|.|.|+|+... +. ...++.+... .. ....|.|.++...
T Consensus 7 ~~~F~~~P~~v-~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 85 (126)
T 2dav_A 7 GILFIEKPQGG-TVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN 85 (126)
T ss_dssp SCSCCSCCCCC-EEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTT
T ss_pred ccEEEEcCCCe-EEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcc
Confidence 46799999888 99999999999999885 8999999997421 11 1345554211 11 1478999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEeec
Q psy5280 172 DVGMYEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
|+|.|+|.|.|..|..++.+.|.|..
T Consensus 86 DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 86 FAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp SCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999999999987
No 75
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.63 E-value=3.9e-15 Score=125.28 Aligned_cols=138 Identities=17% Similarity=0.164 Sum_probs=103.1
Q ss_pred eeeeecCCCCCeeeecCC--CeecCCC-----C----------ceeeeccccccCCCCC-CC----------------CC
Q psy5280 57 TQEKLNPERPKFEPYLPP--GVPFHPD-----K----------SFYFPRDFDLERPPRE-GY----------------AQ 102 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~--g~~~~p~-----~----------~~~~~~~~~ie~~~~~-~~----------------~~ 102 (202)
..|.+.+.+.+.+.|+++ |..+... . ..+.+..+..++.|.| |. ..
T Consensus 20 l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 99 (389)
T 2jll_A 20 LVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEY 99 (389)
T ss_dssp EEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEE
T ss_pred EEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEe
Confidence 558889999999999999 8876541 1 1222344555555554 21 13
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC--cEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG--RYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~--r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
+|.|...+... .+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... ++.+. .......|.|.++...|+|.|+|.|
T Consensus 100 ~P~~~~~~~~~-~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a 177 (389)
T 2jll_A 100 APKFISNQTIY-YSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTY-STGRKMILEIAPTSDNDFGRYNCTA 177 (389)
T ss_dssp EEEECCSCCEE-EECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEE-ECSSCEEEEECCCSTTSSEEEEEEE
T ss_pred CCEEecCcceE-EeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEe-ccCCEEEEEECCCChhhCEEEEEEE
Confidence 56665544333 67899999999999999999999999999987653 55552 2334678999999999999999999
Q ss_pred EeCCceEEEEEEEEee
Q psy5280 181 SNEHGTARQRVSSGNP 196 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~ 196 (202)
.|..|.....+.|.+.
T Consensus 178 ~N~~G~~~~~~~l~v~ 193 (389)
T 2jll_A 178 TNHIGTRFQEYILALA 193 (389)
T ss_dssp EETTEEEEEEEEEEEC
T ss_pred EcCCCcEEEEEEEEec
Confidence 9999999888877764
No 76
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.2e-15 Score=110.26 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=76.9
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEee---cCCceEEEeCCE-Eccc--CCcEEEEEeeC-----CeEEEEEccCCC
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGY---PKPKVSFYFNDE-LIEM--GGRYDSSYTRN-----GQATLFINKMLD 170 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~---P~P~i~W~k~g~-~l~~--~~r~~i~~~~~-----~~~~L~I~~~~~ 170 (202)
..+.|+.++.+. .+.+|+++.|.|.+.|. |.|.|.|+|+.. .+.. ..++.+..... ..+.|.|.++..
T Consensus 11 ~~~~f~~~P~~v-~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 89 (118)
T 2edn_A 11 PTGVFLKKPDSV-SVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL 89 (118)
T ss_dssp CSSSCSBCCCCC-EEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred CcceEEECCCCe-EEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh
Confidence 356788899888 99999999999999985 799999999742 2222 23444421111 147899999999
Q ss_pred CCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 171 RDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 171 ~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
.|+|.|.|.|.|..|..++.+.|.|.++
T Consensus 90 ~D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 90 GDRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp TTCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred hhCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999999999999875
No 77
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.62 E-value=5.8e-15 Score=102.31 Aligned_cols=91 Identities=20% Similarity=0.131 Sum_probs=78.5
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+...+.+|+++.|.|.+. .|.|.+.|+|++..+..+.++.+. .......|.|.++..+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~-~~~~~~~L~I~~~~~~D~G~Y~C~a- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFE-HKGCQRILFINNCQMTDDSEYYVTA- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEE-EETTEEEEEEEEECTTTCCEEEEEE-
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEE-ecCCEEEEEEcCCCcCcCEEEEEEE-
Confidence 4789998888754788999999999998 799999999999999888888774 3344678999999999999999999
Q ss_pred eCCceEEEEEEEEeecC
Q psy5280 182 NEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~~ 198 (202)
|...+++.|.|..+
T Consensus 83 ---g~~~~~~~l~V~~~ 96 (100)
T 2yuv_A 83 ---GDEKCSTELFVRSG 96 (100)
T ss_dssp ---TTEEEEEEEEECCS
T ss_pred ---CCceEEEEEEEecC
Confidence 77888889988765
No 78
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.62 E-value=3.8e-15 Score=103.75 Aligned_cols=95 Identities=6% Similarity=-0.028 Sum_probs=77.1
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCE-Ecc-------cCCcEEEEEeeCCeEEEEEccCCCCCC
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDE-LIE-------MGGRYDSSYTRNGQATLFINKMLDRDV 173 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~-~l~-------~~~r~~i~~~~~~~~~L~I~~~~~~D~ 173 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|++++. .+. ...++.+.........|.|.++..+|+
T Consensus 5 ~~p~~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 83 (108)
T 3m45_A 5 GSQGQFPLTQNV-TVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDE 83 (108)
T ss_dssp ---CCCEECCCE-EEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGC
T ss_pred cCCCccccCCee-EEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHC
Confidence 467788888888 99999999999999999999999999875 221 234676644444578999999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 174 GMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 174 G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|+|.|.| .|..+..+.|.|..+
T Consensus 84 G~Y~C~~~n-~~~~~~~~~L~V~~~ 107 (108)
T 3m45_A 84 GQYTCSLFT-MPVKTSKAYLTVLGV 107 (108)
T ss_dssp EEEEEEECS-SSCEEEEEEEEEECC
T ss_pred eEEEEEEEc-CCCcEEEEEEEEEcC
Confidence 999999999 899999999998764
No 79
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.62 E-value=3.8e-15 Score=103.79 Aligned_cols=89 Identities=19% Similarity=0.180 Sum_probs=73.1
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC--cEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG--RYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~--r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
++.|+..+.+. .+.+|+++.|.|.+.| |.|.+.|+|++..+..+. ++.+. .......|.|.++..+|+|.|+|.|
T Consensus 7 p~~~~~~~~~~-~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~~~L~I~~~~~~D~G~Y~C~a 83 (103)
T 1x44_A 7 GIMVTKQLEDT-TAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIR-VEGKKHILIIEGATKADAAEYSVMT 83 (103)
T ss_dssp SCCCSBCCCCE-EEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEE-EETTEEEEEEEEECTTTCSEEEEEE
T ss_pred CceeeccCCCE-EEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEE-EcCCEEEEEECCCCcccCEEEEEEE
Confidence 34477777777 8999999999999988 779999999999998777 66763 2344678999999999999999999
Q ss_pred EeCCceEEEEEEEEeecC
Q psy5280 181 SNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~ 198 (202)
.| .+.++.|.|...
T Consensus 84 ~n----~~~~~~l~V~~~ 97 (103)
T 1x44_A 84 TG----GQSSAKLSVDLK 97 (103)
T ss_dssp TT----EEEEEEEEEECC
T ss_pred CC----CcEEEEEEEeCC
Confidence 88 466677777654
No 80
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=3.3e-15 Score=103.91 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=77.1
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.| |.|.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|
T Consensus 6 ~~pp~~~~~~~~~-~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a 82 (103)
T 2edf_A 6 SGPAAIIKPLEDQ-WVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVC-EGTMAMLVIRGASLKDAGEYTCEV 82 (103)
T ss_dssp CCCCCEEECCCCE-EECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEE-ETTEEEEEESSCCTTTCSEEEEEC
T ss_pred CCCcEEEecCCcc-EEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEE-CCCEEEEEECCCCcccCEEEEEEE
Confidence 4578888888887 9999999999999998 889999999999998888887743 344678999999999999999999
Q ss_pred EeCCceEEEEEEEEeecC
Q psy5280 181 SNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~ 198 (202)
.| ...++.|.|..+
T Consensus 83 ~n----~~~~~~l~V~~~ 96 (103)
T 2edf_A 83 EA----SKSTASLHVEEK 96 (103)
T ss_dssp SS----CEEEEEEEECCC
T ss_pred cc----CCcEEEEEEeCC
Confidence 99 366777777654
No 81
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=1.4e-15 Score=106.48 Aligned_cols=91 Identities=14% Similarity=-0.000 Sum_probs=75.8
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.|.|.| +.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|
T Consensus 6 ~~~p~~~~~~~~~-~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a 82 (106)
T 2dlt_A 6 SGQLEVLQDIADL-TVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISH-VGRFHKLVIDDVRPEDEGDYTFVP 82 (106)
T ss_dssp CCCCCEEECCCCE-EEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEE-ETTEEEEEESSCCTTTCSCEEEEE
T ss_pred CCCCEEecCCCCe-EEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEE-eCCEEEEEECCCCcCCCEEEEEEE
Confidence 3578898888888 99999999999999999988 99999999998888887743 344678999999999999999999
Q ss_pred EeCCceEEEEEEEEee
Q psy5280 181 SNEHGTARQRVSSGNP 196 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~ 196 (202)
.|..+ +.++.|.|.
T Consensus 83 ~n~~~--~~~~~l~V~ 96 (106)
T 2dlt_A 83 DGYAL--SLSAKLNFL 96 (106)
T ss_dssp ETSCC--CCCBCEEEE
T ss_pred ccCCc--eEEEEEEEE
Confidence 99833 344455544
No 82
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.60 E-value=6.6e-15 Score=101.15 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=74.3
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
.+.|+..+.+. .+.+|+++.|.|.+ +.|.|.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|
T Consensus 8 ~~~~~~~~~~~-~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a-- 82 (95)
T 2k1m_A 8 VSAFSKKPRSV-EVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLAT-EGTRHTLTVREVGPADQGSYAVIA-- 82 (95)
T ss_dssp CCCCSBCCCCE-EEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEE-ETTEEEEEESSCCTTCCSEEEEEE--
T ss_pred CCeeEeCCCcE-EEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEE-cCCEEEEEEcCCCcccCEEEEEEE--
Confidence 46777777777 89999999999999 89999999999999998888877733 344678999999999999999999
Q ss_pred CCceEEEEEEEEee
Q psy5280 183 EHGTARQRVSSGNP 196 (202)
Q Consensus 183 ~~G~~~~~~~L~V~ 196 (202)
|....++.|.|.
T Consensus 83 --g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 --GSSKVKFDLKVI 94 (95)
T ss_dssp --TTEEEEEEEEEE
T ss_pred --CCceEEEEEEEe
Confidence 667777888875
No 83
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=2.1e-15 Score=105.93 Aligned_cols=91 Identities=8% Similarity=0.039 Sum_probs=76.5
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCC-ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKP-KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.++.|+..+.+. .+.+|+++.|.|.+.|.|.+ .+.|+|+|..+..+.++.+.. ....+.|.|.++..+|+|.|+|.|
T Consensus 7 ~p~~~~~~~~~~-~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a 84 (104)
T 2eny_A 7 GHVGITKRLKTM-EVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATR-QGRKYILVVREAAPSDAGEVVFSV 84 (104)
T ss_dssp CCCCCSBCCCCE-EEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEE-ETTEEEEEECSCCTTTCSCEEEEE
T ss_pred CCCEEEecCCCc-EEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEE-cCCEEEEEECCCCHHHCEEEEEEE
Confidence 466788888887 99999999999999998864 899999999998888887743 345678999999999999999988
Q ss_pred EeCCceEEEEEEEEeecC
Q psy5280 181 SNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~ 198 (202)
.| ..+++.|.|..+
T Consensus 85 ~~----~~~~a~L~V~~~ 98 (104)
T 2eny_A 85 RG----LTSKASLIVRER 98 (104)
T ss_dssp TT----EEEEECEEEECC
T ss_pred CC----eeEEEEEEEeCC
Confidence 55 567788888764
No 84
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.59 E-value=3.5e-15 Score=122.58 Aligned_cols=129 Identities=9% Similarity=-0.017 Sum_probs=92.4
Q ss_pred cCCCCCeeeecCCCeecCCC--------Cc-----eeeeccccccCCCCC-C------------------CCCCCeEEec
Q psy5280 62 NPERPKFEPYLPPGVPFHPD--------KS-----FYFPRDFDLERPPRE-G------------------YAQAPRFLNQ 109 (202)
Q Consensus 62 ~~~~~~~~~w~~~g~~~~p~--------~~-----~~~~~~~~ie~~~~~-~------------------~~~~P~fi~~ 109 (202)
.+.+.+.+.|+++|..+... .. .+.......+++|.| | ...+|.+...
T Consensus 143 ~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~ 222 (313)
T 4fqp_A 143 GGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSIS 222 (313)
T ss_dssp EEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEE
T ss_pred CccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccc
Confidence 46778899999999764321 11 122233334455543 2 1135666433
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCC-ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKP-KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
+.+...+.+|+.+.|.|.+.|.|.| .++|+|++..+.... .. .+..|.|.++...|+|.|+|.|.|..|..+
T Consensus 223 ~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~--~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 295 (313)
T 4fqp_A 223 GYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA--VA-----QGAQLLIRPVDKPINTTLICNVTNALGARQ 295 (313)
T ss_dssp CCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--EE-----ETTEEEECCCSSCCEEEEEEEEECSSCEEE
T ss_pred cccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce--EE-----eCCEEEECcCChhhCEEEEEEEEeCCCcEE
Confidence 3333367788999999999999999 599999998876542 11 135799999999999999999999999999
Q ss_pred EEEEEEeec
Q psy5280 189 QRVSSGNPA 197 (202)
Q Consensus 189 ~~~~L~V~~ 197 (202)
+++.|.|..
T Consensus 296 ~~~~l~V~~ 304 (313)
T 4fqp_A 296 AELTVQVKE 304 (313)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEe
Confidence 999999863
No 85
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.59 E-value=3.8e-15 Score=116.34 Aligned_cols=131 Identities=11% Similarity=0.006 Sum_probs=94.0
Q ss_pred eeeeecCCCCCe-eeecCCCeecCCCCceeeeccccccCCCCC-CC--------------CCCCeEEeccCCeeEEecCC
Q psy5280 57 TQEKLNPERPKF-EPYLPPGVPFHPDKSFYFPRDFDLERPPRE-GY--------------AQAPRFLNQEHDTQYGIKNE 120 (202)
Q Consensus 57 ~~~~~~~~~~~~-~~w~~~g~~~~p~~~~~~~~~~~ie~~~~~-~~--------------~~~P~fi~~~~~~~~v~~G~ 120 (202)
..|.+.+.+.+. +.|+++|..+......+.+..+..++.|.| |. ..+|.++..+ .. .+.+|+
T Consensus 27 L~C~~~~~p~~~~v~W~k~g~~l~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~l~V~~~p~~~~~~-~~-~v~~G~ 104 (204)
T 3sgj_C 27 LKCQGAYSPEDQSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTQLSTLSDPVQLEVHIGWLLLQAP-RW-VFKEED 104 (204)
T ss_dssp EEEECCSSSSCCCEEEEETTEEESCCSSEEEESSCCGGGCEEEEEEETTSBCCCCEEEEEECSSEEEECS-CS-EEETTC
T ss_pred EEEcCCCCCCCcEEEEEECCEEcccCccEEEEecccccCCEEEEEEeCCCcccccEEEEEecCceEecCC-ce-eEeCCC
Confidence 447777776664 899999999877655555566666666654 21 1244444333 34 778999
Q ss_pred eEEEEEEEEee-cCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC-CceEEEEEEEEeecC
Q psy5280 121 NSSLFWFVYGY-PKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNE-HGTARQRVSSGNPAQ 198 (202)
Q Consensus 121 ~v~L~C~v~G~-P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~-~G~~~~~~~L~V~~~ 198 (202)
++.|.|.+.+. |.|.+.|+|++..+... .....|.|.++..+|+|.|+|.|.|. .+..+..+.|.|..+
T Consensus 105 ~v~L~C~~~~~~p~~~v~W~k~g~~~~~~---------~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (204)
T 3sgj_C 105 PIHLRCHSWKNTALHKVTYLQNGKGRKYF---------HHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQG 175 (204)
T ss_dssp CEEEEEEEGGGCCCEEEEEEETTEEEEEE---------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred cEEEEEEecCCCCCceEEEEECCcEeecc---------cCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCc
Confidence 99999999665 66889999999876421 12457999999999999999999994 445566677877654
No 86
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.6e-15 Score=108.02 Aligned_cols=91 Identities=9% Similarity=0.083 Sum_probs=76.2
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
++.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+..+.++.+.......+.|.|.++..+|+|.|+|.
T Consensus 13 p~~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 88 (115)
T 2cr6_A 13 RVHIIEDLEDV-DVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE--- 88 (115)
T ss_dssp CCEEEECCCEE-EEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE---
T ss_pred CCeEeccCccE-EEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE---
Confidence 45788888777 89999999999999999999999999999998887776632224456899999999999999999
Q ss_pred CCceEEEEEEEEeecC
Q psy5280 183 EHGTARQRVSSGNPAQ 198 (202)
Q Consensus 183 ~~G~~~~~~~L~V~~~ 198 (202)
+|.....+.|.|...
T Consensus 89 -~g~~~~~~~L~V~~~ 103 (115)
T 2cr6_A 89 -AGDQRASAALRVTEK 103 (115)
T ss_dssp -ETTEECCEEEEEECC
T ss_pred -ECCeeEEEEEEEECC
Confidence 566777788888754
No 87
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=6.2e-15 Score=102.67 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=73.3
Q ss_pred CCCeEEeccCCe--eEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 102 QAPRFLNQEHDT--QYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 102 ~~P~fi~~~~~~--~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.+|.++..+.+. ..+.+|+++.|.|.+.|.|.| +.|+|++..+....++.+.. ......|.|.++..+|+|.|+|.
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~ 83 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKM-DGRKHRLILPEAKVQDSGEFECR 83 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEE-ETTEEEEEESSCCTTTCEEEEEE
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEe-CCCEEEEEECCCChhhCEEEEEE
Confidence 467777777662 388999999999999999999 99999999998877777643 34567899999999999999999
Q ss_pred EEeCCceEEEEEEEEeec
Q psy5280 180 ASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~ 197 (202)
|.|..+. +.|.|..
T Consensus 84 a~n~~~~----~~l~V~~ 97 (104)
T 2e6p_A 84 TEGVSAF----FGVTVQD 97 (104)
T ss_dssp CSSCCCC----EEEEEEC
T ss_pred ECCceEE----EEEEEcC
Confidence 9998663 4455443
No 88
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.58 E-value=4.2e-14 Score=130.27 Aligned_cols=141 Identities=15% Similarity=0.124 Sum_probs=111.6
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCceeeeccccccCCCCCC--------------------CCCCCeEEeccCCeeEE
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKSFYFPRDFDLERPPREG--------------------YAQAPRFLNQEHDTQYG 116 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~~~~~~~~~ie~~~~~~--------------------~~~~P~fi~~~~~~~~v 116 (202)
..|.+.+.+.+.+.|+++|..+......+....+..++.|.|. ...+|.+...+.+. .+
T Consensus 363 l~C~~~g~p~~~v~W~k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~-~v 441 (816)
T 3dmk_A 363 FTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEE-TM 441 (816)
T ss_dssp EEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCE-EE
T ss_pred EEEEEeccCCCEEEEEECCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcce-EE
Confidence 3477788888899999999998776555555666666666542 02467777666666 88
Q ss_pred ecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEee----CCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy5280 117 IKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTR----NGQATLFINKMLDRDVGMYEALASNEHGTARQRVS 192 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~----~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 192 (202)
.+|+.+.|.|.+.|.|.|.++|++++..+..+.++.+.... .....|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 442 ~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 521 (816)
T 3dmk_A 442 EPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAK 521 (816)
T ss_dssp CSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEE
T ss_pred cCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEE
Confidence 89999999999999999999999999999887776653211 11246999999999999999999999999999999
Q ss_pred EEeecC
Q psy5280 193 SGNPAQ 198 (202)
Q Consensus 193 L~V~~~ 198 (202)
|.|...
T Consensus 522 l~V~~~ 527 (816)
T 3dmk_A 522 LNVYGL 527 (816)
T ss_dssp EEECSS
T ss_pred EEEecC
Confidence 988643
No 89
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=1.1e-14 Score=102.30 Aligned_cols=91 Identities=15% Similarity=0.096 Sum_probs=75.2
Q ss_pred CCCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccC-CcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 100 YAQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMG-GRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 100 ~~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~-~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
...+|.|+..+.+...+.+|+++.|.|.+ +.|.|.+.|+|+|..+..+ .++.+.. ......|.|.++..+|+|.|+|
T Consensus 12 ~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C 89 (104)
T 1pd6_A 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFES-IGAKRTLTISQCSLADDAAYQC 89 (104)
T ss_dssp CSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEE-ETTEEEEEECSCSSSSCEEEEE
T ss_pred ccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEe-cCCEEEEEECCCCcccCEEEEE
Confidence 34578999888885589999999999999 7999999999999999876 6777632 3446699999999999999999
Q ss_pred EEEeCCceEEEEEEEEee
Q psy5280 179 LASNEHGTARQRVSSGNP 196 (202)
Q Consensus 179 ~a~N~~G~~~~~~~L~V~ 196 (202)
.| |....++.|.|.
T Consensus 90 ~a----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 90 VV----GGEKCSTELFVK 103 (104)
T ss_dssp EE----TTEEECCEEEEE
T ss_pred EE----CCCcEEEEEEEe
Confidence 99 445566777765
No 90
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=2.2e-14 Score=102.23 Aligned_cols=78 Identities=22% Similarity=0.326 Sum_probs=66.8
Q ss_pred CeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeC---CeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEee
Q psy5280 120 ENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRN---GQATLFINKMLDRDVGMYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 120 ~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
+...|.|.+.|.|.|.++|+|+|..+..+.++.+..... ..+.|.|.++...|+|.|+|.|.|..|...+++.|.|.
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 100 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFL 100 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCS
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEEc
Confidence 667899999999999999999999998877666533322 35689999999999999999999999999999988765
Q ss_pred c
Q psy5280 197 A 197 (202)
Q Consensus 197 ~ 197 (202)
.
T Consensus 101 ~ 101 (118)
T 1wwc_A 101 K 101 (118)
T ss_dssp C
T ss_pred c
Confidence 4
No 91
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.58 E-value=1.4e-14 Score=98.69 Aligned_cols=84 Identities=11% Similarity=0.086 Sum_probs=70.6
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
++.|...+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+.... ...|.|.++..+|+|.|+|.|.|
T Consensus 3 ~~~i~~~p~~~-~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~n 71 (91)
T 3bfo_A 3 KLQICVEPTSQ-KLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET----------KKLYMVPYVDLEHQGTYWCHVYN 71 (91)
T ss_dssp CCEEEECCCCE-EECTTSCEEEECEEECSSCCEEEEEETTEECTTCC----------SSEEEESSCCGGGCEEEEEEEEC
T ss_pred ceEEEECCCcc-EecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC----------CCeEEECCCCHHhCEEEEEEEEc
Confidence 46677777777 89999999999999999999999999998876532 35799999999999999999999
Q ss_pred CCceEE-EEEEEEeec
Q psy5280 183 EHGTAR-QRVSSGNPA 197 (202)
Q Consensus 183 ~~G~~~-~~~~L~V~~ 197 (202)
..|... ..+.|.|..
T Consensus 72 ~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 72 DRDSQDSKKVEIIIDE 87 (91)
T ss_dssp SSCEEECCCEEEEEC-
T ss_pred CCCCEEeeeEEEEEeh
Confidence 999765 446776653
No 92
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.58 E-value=1.4e-15 Score=124.37 Aligned_cols=132 Identities=13% Similarity=0.027 Sum_probs=95.4
Q ss_pred cCCCCCeeeecCCCeecCCCCc-----------eeeeccccccCCCCC-C------------------CCCCCeEEeccC
Q psy5280 62 NPERPKFEPYLPPGVPFHPDKS-----------FYFPRDFDLERPPRE-G------------------YAQAPRFLNQEH 111 (202)
Q Consensus 62 ~~~~~~~~~w~~~g~~~~p~~~-----------~~~~~~~~ie~~~~~-~------------------~~~~P~fi~~~~ 111 (202)
.+.|.+.+.|+++|.++..... .+.......+++|.| | ...+|.+...+.
T Consensus 140 ~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~ 219 (308)
T 4fom_A 140 TGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGY 219 (308)
T ss_dssp EEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCC
T ss_pred CCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEccc
Confidence 5678889999999988653211 122233444455543 1 113455544444
Q ss_pred CeeEEecCCeEEEEEEEEeecCC-ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEE
Q psy5280 112 DTQYGIKNENSSLFWFVYGYPKP-KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQR 190 (202)
Q Consensus 112 ~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~ 190 (202)
+...+.+|+.+.|.|.+.|.|.| .+.|+|++..+..... . .+...|.|.++..+|+|.|+|.|.|.+|..+++
T Consensus 220 ~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~--~----~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~ 293 (308)
T 4fom_A 220 DGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL--A----SDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQ 293 (308)
T ss_dssp CSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB--C----STTEEECCSCCCSCCCSEEEEEEEETTEEEEEE
T ss_pred ceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE--E----cCCeEEEECCCChhhCEEEEEEEEeCCCcEEEE
Confidence 44367788999999999999999 6999999987765422 1 345667789999999999999999999999999
Q ss_pred EEEEeecCC
Q psy5280 191 VSSGNPAQG 199 (202)
Q Consensus 191 ~~L~V~~~~ 199 (202)
+.|.|..+-
T Consensus 294 ~~l~V~~~P 302 (308)
T 4fom_A 294 KVIYISDPP 302 (308)
T ss_dssp EECCEECCC
T ss_pred EEEEEEcCC
Confidence 999988653
No 93
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.9e-15 Score=104.91 Aligned_cols=90 Identities=11% Similarity=0.099 Sum_probs=73.9
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC----cEEEEEeeCCeEEEEEccCCCCCCEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG----RYDSSYTRNGQATLFINKMLDRDVGMY 176 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~----r~~i~~~~~~~~~L~I~~~~~~D~G~Y 176 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.|.| |.+.|+|++..+..+. ++.+. .......|.|.++..+|+|.|
T Consensus 6 ~~p~~~~~~~~~~-~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~-~~~~~~~L~I~~~~~~D~G~Y 82 (101)
T 2edk_A 6 SGPVLIVTPLEDQ-QVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFK-KDGKRHILIFSDVVQEDRGRY 82 (101)
T ss_dssp CCCCCEEECCCCE-EEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEE-ECSSEEEEECSSCCGGGCSBE
T ss_pred cCCCEEEecCCce-EEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEE-ECCCEEEEEECCCChhhCEEE
Confidence 3578888888887 999999999999999999 9999999999988765 55663 234457899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEeec
Q psy5280 177 EALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 177 ~C~a~N~~G~~~~~~~L~V~~ 197 (202)
+|.|.| ...++.|.|..
T Consensus 83 ~C~a~n----~~~~~~l~V~~ 99 (101)
T 2edk_A 83 QVITNG----GQCEAELIVEE 99 (101)
T ss_dssp EEECSS----CEECCBEEEEC
T ss_pred EEEEcC----CcEEEEEEEeC
Confidence 999988 34556677664
No 94
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.57 E-value=1.6e-14 Score=99.51 Aligned_cols=84 Identities=11% Similarity=0.042 Sum_probs=67.0
Q ss_pred EeccCCeeEEecCCeEEEEEEEE-eecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVY-GYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~-G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
+..+.+. .+.+|+++.|.|.+. |.|.|.+.|+|++........+.. .+.|.|.++..+|+|.|.|.|.|..|
T Consensus 14 ~~~~~~~-~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~------~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (98)
T 1gl4_B 14 VEEQRSQ-SVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDF------NGILTIRNVQPSDAGTYVCTGSNMFA 86 (98)
T ss_dssp ECSCCEE-EECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTEEEE------TTEEEECSCCGGGCEEEEEEEECSSC
T ss_pred EeCCCCe-EEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCceeecC------CCEEEEeCCChhhCEEEEEEecCCCC
Confidence 3344444 889999999999998 689999999998544433322221 35799999999999999999999999
Q ss_pred eEEEEEEEEeec
Q psy5280 186 TARQRVSSGNPA 197 (202)
Q Consensus 186 ~~~~~~~L~V~~ 197 (202)
..+..+.|.|.+
T Consensus 87 ~~~~~~~l~V~~ 98 (98)
T 1gl4_B 87 MDQGTATLHVQV 98 (98)
T ss_dssp EEEEEEEEEEC-
T ss_pred ccccEEEEEEeC
Confidence 999999998863
No 95
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.57 E-value=7.3e-14 Score=108.45 Aligned_cols=96 Identities=19% Similarity=0.240 Sum_probs=83.2
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcc-cCCcEEEEEeeCCeEEEEEccCCC-CCCEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIE-MGGRYDSSYTRNGQATLFINKMLD-RDVGMYEAL 179 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~-~~~r~~i~~~~~~~~~L~I~~~~~-~D~G~Y~C~ 179 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+. ...++.+.....+...|.|.++.. .|+|.|+|.
T Consensus 5 ~pP~~~~~p~~~-~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 5 HPPEIIRKPQNQ-GVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp CCCEEEECCCCE-EEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCEEEcCCCce-EEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 589999988887 89999999999999999999999999999987 566776644444457999999999 999999999
Q ss_pred EEeCCce-EEEEEEEEeecC
Q psy5280 180 ASNEHGT-ARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~-~~~~~~L~V~~~ 198 (202)
|.|..|. .+..+.|.|...
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~ 103 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEG 103 (212)
T ss_dssp EECSSSCEEEEEEEEEEECT
T ss_pred EEeCCCCeEEeeEEEEEecc
Confidence 9999998 778888888643
No 96
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.57 E-value=7e-15 Score=100.84 Aligned_cols=84 Identities=14% Similarity=0.060 Sum_probs=71.3
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
..+.+. .+.+|+++.|.|.+.| .|.+.|+|++..+....++.+ . ...|.|.++..+|+|.|+|.|.|..|..
T Consensus 6 ~~p~~~-~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~----~-~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 77 (95)
T 4hwu_A 6 SQPEAY-VVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVL----I-GEYLQIKGATPRDSGLYACTAARTVDSE 77 (95)
T ss_dssp --CEEE-EECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEE----E-TTEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred cCCCcE-EECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEE----e-CCEEEECcCCcccCEEEEEEEccCCCcE
Confidence 344445 7889999999999987 579999999999988777776 2 3589999999999999999999999999
Q ss_pred EEEEEEEeecCC
Q psy5280 188 RQRVSSGNPAQG 199 (202)
Q Consensus 188 ~~~~~L~V~~~~ 199 (202)
+..+.|.|..+.
T Consensus 78 ~~~~~l~V~~~~ 89 (95)
T 4hwu_A 78 TWIFMVNVTDAA 89 (95)
T ss_dssp EEEEEEEECCC-
T ss_pred EEEEEEEEeCCc
Confidence 999999998663
No 97
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=3.5e-14 Score=101.52 Aligned_cols=90 Identities=12% Similarity=0.158 Sum_probs=74.9
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC----------cEEEEEeeCCeEEEEEccCCCC
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG----------RYDSSYTRNGQATLFINKMLDR 171 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~----------r~~i~~~~~~~~~L~I~~~~~~ 171 (202)
.+|.|+..+.+. .+.+|+++.|.|.+++ .|.+.|+|||+.|..+. ++.+.. +...+.|.|.++..+
T Consensus 7 p~~~~~~~l~d~-~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~-~g~~~~L~I~~v~~~ 82 (112)
T 2e6q_A 7 GTARLVAGLEDV-QVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQ-KGLQHRLILHAVKHQ 82 (112)
T ss_dssp SCCCEEECCCCE-EEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECC-BTTEEEEEEESCCST
T ss_pred CCcEEecCCCCe-EEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEe-CCcEEEEEECCCCHH
Confidence 357899999998 9999999999999998 78999999999999887 887732 234578999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 172 DVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|+|.|+|...+ ...+++.|.|.+.
T Consensus 83 D~G~Y~~~~~~---~~~ssA~L~V~~~ 106 (112)
T 2e6q_A 83 DSGALVGFSCP---GVQDSAALTIQES 106 (112)
T ss_dssp TCSEEEEEEET---TEEEEEEEEEECS
T ss_pred HCccEEEEEEC---CeeEEEEEEEeCC
Confidence 99999775443 4567889998864
No 98
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.57 E-value=7.3e-15 Score=111.27 Aligned_cols=130 Identities=11% Similarity=-0.009 Sum_probs=93.1
Q ss_pred eeeeecCCCCCe-eeecCCCeecCCCCceeeeccccccCCCCC-CCC--------------CCCeEEeccCCeeEEecCC
Q psy5280 57 TQEKLNPERPKF-EPYLPPGVPFHPDKSFYFPRDFDLERPPRE-GYA--------------QAPRFLNQEHDTQYGIKNE 120 (202)
Q Consensus 57 ~~~~~~~~~~~~-~~w~~~g~~~~p~~~~~~~~~~~ie~~~~~-~~~--------------~~P~fi~~~~~~~~v~~G~ 120 (202)
..|.+.+.+.+. +.|+++|..+......+....+..++.|.| |.+ .++.++. .... .+.+|+
T Consensus 27 L~C~~~~~p~~~~~~W~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~~l~V~~~~~~~~-~~~~-~~~~g~ 104 (175)
T 1fnl_A 27 LKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQ-APRW-VFKEED 104 (175)
T ss_dssp EEEECCCBTTBCCCEEEETTEEEESSCSEEEESSCCGGGCEEEEEECSSSCCCCCEEEEEECSSEEEE-CSCS-EEETTC
T ss_pred EEeeCCCCCCCcceEEEECCEEccCCceEEEEeCCCcccCEEEEEEeeCCcccccEEEEEeCCCceee-CCCc-eecCCC
Confidence 457777776554 789999998766555555566666666654 211 1233333 2334 678999
Q ss_pred eEEEEEEEEeecCC-ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce-EEEEEEEEeec
Q psy5280 121 NSSLFWFVYGYPKP-KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGT-ARQRVSSGNPA 197 (202)
Q Consensus 121 ~v~L~C~v~G~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~L~V~~ 197 (202)
.+.|.|.+.|.|.+ .+.|+|++..+... .....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|.+
T Consensus 105 ~~~l~C~~~~~~~~~~~~W~k~g~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 105 PIHLRCHSWKNTALHKVTYLQNGKDRKYF---------HHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp CEEEEEEECTTCCCEEEEEEETTEEEEEE---------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CEEEEEEcCCCCCceEEEEEECCeEccCC---------CCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 99999999988765 99999999887421 12467999999999999999999997764 45567777765
No 99
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.57 E-value=4.8e-15 Score=124.68 Aligned_cols=127 Identities=12% Similarity=-0.002 Sum_probs=94.3
Q ss_pred eeeeecCCCCCeeeecCCCeecC------CC------CceeeeccccccCCCCC-CC----------------CCCCeEE
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFH------PD------KSFYFPRDFDLERPPRE-GY----------------AQAPRFL 107 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~------p~------~~~~~~~~~~ie~~~~~-~~----------------~~~P~fi 107 (202)
..|.+.+.+.+.+.|+++|..+. .. ...+....+..++.|.| |. ..+|.+.
T Consensus 232 l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 311 (388)
T 2v5m_A 232 LLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAK 311 (388)
T ss_dssp ECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccc
Confidence 34666777888899999854321 11 11122344455555544 21 1345555
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
..+.+. .+.+|+++.|.|.+.|.|.|.++|+|+|..+..+ ...|.|.++..+|+|.|+|.|.|..|..
T Consensus 312 ~~~~~~-~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~-----------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 379 (388)
T 2v5m_A 312 IDPPTQ-TVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS-----------ESVLRIESVKKEDKGMYQCFVRNDRESA 379 (388)
T ss_dssp EESSEE-EECTTSCEEEEEEEEEECCCEEEEEETTEECSCC-----------SSEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred cCCCcE-EecCCCCEEEEEEeccccCCeEEEEECCEECccC-----------CCEEEEecCChhhCEEEEEEEEcCCCcE
Confidence 555555 7889999999999999999999999999987542 3579999999999999999999999999
Q ss_pred EEEEEEEe
Q psy5280 188 RQRVSSGN 195 (202)
Q Consensus 188 ~~~~~L~V 195 (202)
.+++.|.|
T Consensus 380 ~~~~~l~V 387 (388)
T 2v5m_A 380 EASAELKL 387 (388)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999876
No 100
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.57 E-value=2.4e-14 Score=116.10 Aligned_cols=140 Identities=11% Similarity=-0.006 Sum_probs=97.6
Q ss_pred eeeeecCCCC-Ceeee-cCCCeecCCCCc-------eeeeccccccCCC-CC-C---------------------CCCCC
Q psy5280 57 TQEKLNPERP-KFEPY-LPPGVPFHPDKS-------FYFPRDFDLERPP-RE-G---------------------YAQAP 104 (202)
Q Consensus 57 ~~~~~~~~~~-~~~~w-~~~g~~~~p~~~-------~~~~~~~~ie~~~-~~-~---------------------~~~~P 104 (202)
..|.+.+ +. +.+.| .++|..+..... .+....+..++.| .| | ...+|
T Consensus 111 l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P 189 (290)
T 2o26_X 111 VRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIP 189 (290)
T ss_dssp ECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCC
T ss_pred EeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCC
Confidence 4466664 55 78999 789988654221 1223445555566 43 2 11467
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCc-eEEEeCCEEc----ccCCcEEEEE--eeCCeEEEEEccCCCCCCEEEE
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPK-VSFYFNDELI----EMGGRYDSSY--TRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~-i~W~k~g~~l----~~~~r~~i~~--~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
.|...+.+. .+.+|+++.|.|.+.|.|.|. +.|++++..+ .......+.. .....+.|.|.++..+|+|.|+
T Consensus 190 ~i~~~~~~~-~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~ 268 (290)
T 2o26_X 190 VVSVPETSH-LLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFM 268 (290)
T ss_dssp EEECSCSBC-CCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEE
T ss_pred ccccCCCcc-eEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEE
Confidence 776666666 788999999999999999997 9999998763 3222221110 0123568999999999999999
Q ss_pred EEEEeCCceEEEEEEEEeecC
Q psy5280 178 ALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 178 C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|.|..|..+..+.|.|..+
T Consensus 269 C~a~N~~g~~~~~~~l~V~~~ 289 (290)
T 2o26_X 269 CYANNTFGSANVTTTLKVVEK 289 (290)
T ss_dssp EEEECSSCEEEEEEEECC---
T ss_pred EEEeCCCCcEEEEEEEEEEeC
Confidence 999999999999999988754
No 101
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=4.8e-15 Score=102.70 Aligned_cols=78 Identities=10% Similarity=0.095 Sum_probs=69.7
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSG 194 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~ 194 (202)
.+.+|+.+.|.|.+.|.| |.+.|+|++..+....++.+ . ...|.|.++..+|+|.|+|.|.|..|.....+.|.
T Consensus 14 ~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~----~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 87 (99)
T 2cr3_A 14 LVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRI----T-GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVN 87 (99)
T ss_dssp CBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEE----C-SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEE----E-CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEE
Confidence 678999999999999987 89999999998887777776 2 56899999999999999999999999998888888
Q ss_pred eecC
Q psy5280 195 NPAQ 198 (202)
Q Consensus 195 V~~~ 198 (202)
|...
T Consensus 88 V~~~ 91 (99)
T 2cr3_A 88 VSDA 91 (99)
T ss_dssp BCSC
T ss_pred EecC
Confidence 8754
No 102
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.56 E-value=2.3e-15 Score=108.03 Aligned_cols=96 Identities=18% Similarity=0.373 Sum_probs=79.5
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCc-eEEEeCCEEccc--CCcEEEEEe-eCC--eEEEEEccCCCCCC-
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPK-VSFYFNDELIEM--GGRYDSSYT-RNG--QATLFINKMLDRDV- 173 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~-i~W~k~g~~l~~--~~r~~i~~~-~~~--~~~L~I~~~~~~D~- 173 (202)
..+|.|.. +... .+.+|+.+.|.|.+.|.|.|. +.|++++..+.. ..++.+... ... ...|.|.++..+|.
T Consensus 12 ~~~P~i~~-~~~~-~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~ 89 (122)
T 2cry_A 12 NGPPIISS-TQTQ-HALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQ 89 (122)
T ss_dssp CSSCCEEE-ECCC-CCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHH
T ss_pred ecCCCccC-CCeE-EEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCC
Confidence 45788776 6666 888999999999999999998 999999998875 456665322 122 45899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 174 GMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 174 G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|+|.|.|..|.....+.|.|...
T Consensus 90 G~Y~C~a~N~~G~~~~~~~l~V~~~ 114 (122)
T 2cry_A 90 TIYNCTAWNSFGSDTEIIRLKEQGS 114 (122)
T ss_dssp SCEEEEEECSSCEEEEEECCCCSCS
T ss_pred ceEEEEEECCCCeEEEEEEEEECCC
Confidence 9999999999999999999988755
No 103
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.56 E-value=2.8e-14 Score=99.36 Aligned_cols=93 Identities=13% Similarity=0.106 Sum_probs=72.9
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCCEEcccCCcEEEEEeeC-------CeEEEEEccCCCCC
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFNDELIEMGGRYDSSYTRN-------GQATLFINKMLDRD 172 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g~~l~~~~r~~i~~~~~-------~~~~L~I~~~~~~D 172 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.| .|.+.|+|++..+............. ....|.|.++..+|
T Consensus 9 ~~P~i~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 9 PXPQITVQPETQ-SAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CSCEEEECCCCE-EECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCeEEeCCCCc-EEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 478888888877 899999999999999764 57899999999887543211101111 13689999999999
Q ss_pred CEEEEEEEEeCCce-EEEEEEEEe
Q psy5280 173 VGMYEALASNEHGT-ARQRVSSGN 195 (202)
Q Consensus 173 ~G~Y~C~a~N~~G~-~~~~~~L~V 195 (202)
+|.|+|.|.|..|. .+..+.|.|
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEEEe
Confidence 99999999999998 457778776
No 104
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.56 E-value=7.9e-15 Score=101.94 Aligned_cols=92 Identities=15% Similarity=0.268 Sum_probs=77.2
Q ss_pred CCCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 100 YAQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 100 ~~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.+.+|.|+..+.+. .+.+|+++.|.|.+.|.|.| +.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.
T Consensus 5 ~~~pp~~~~~~~~~-~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2e7b_A 5 SSGPVRFQEALKDL-EVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQ-EGAMLELVVRNLRPQDSGRYSCS 81 (103)
T ss_dssp CCCCCCCTBCCCCE-EEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEE-CSSEEEEEECSCCTTTCCCEEEE
T ss_pred CCCCCEEEecCccE-EEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEE-cCCEEEEEEccCCcccCEEEEEE
Confidence 34578888878877 99999999999999999999 99999999998888887743 34456899999999999999998
Q ss_pred EEeCCceEEEEEEEEeecC
Q psy5280 180 ASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~~ 198 (202)
+|.....+.|.|..+
T Consensus 82 ----~g~~~~~~~l~V~~~ 96 (103)
T 2e7b_A 82 ----FGDQTTSATLTVTAL 96 (103)
T ss_dssp ----CSSCBCCBCEEEECC
T ss_pred ----ECCcEEEEEEEEEec
Confidence 666667777877754
No 105
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.56 E-value=7.1e-15 Score=130.64 Aligned_cols=137 Identities=8% Similarity=-0.047 Sum_probs=98.1
Q ss_pred eeeeec-CCCCCeeeecCCCeecCCCCc----------------eeeeccccccCCCCC-CCC-------------CCCe
Q psy5280 57 TQEKLN-PERPKFEPYLPPGVPFHPDKS----------------FYFPRDFDLERPPRE-GYA-------------QAPR 105 (202)
Q Consensus 57 ~~~~~~-~~~~~~~~w~~~g~~~~p~~~----------------~~~~~~~~ie~~~~~-~~~-------------~~P~ 105 (202)
..|.+. +.+.+.+.|+++|..+..... .+.+..+..++.|.| |.+ .+|.
T Consensus 247 L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~~~p~ 326 (527)
T 3qs9_E 247 IRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGF 326 (527)
T ss_dssp EEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC--CE
T ss_pred EEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeCCCceEEEEEEccCc
Confidence 447775 888889999999987654211 022344455555554 221 2344
Q ss_pred EEecc-CCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 106 FLNQE-HDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 106 fi~~~-~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
+...+ .....+.+|+.+.|.|.+.|.|.|.|+|+|+|..|..+.++. ...+.|.|.++..+|+|.|+|.|.|..
T Consensus 327 i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~-----~~~~~L~I~~v~~~D~G~YtC~A~N~~ 401 (527)
T 3qs9_E 327 INATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL-----DNGYSISKFCNHKHQPGEYIFHAENDD 401 (527)
T ss_dssp EECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC-----SSSSEEEEECCCTTCCSCEEEEEEETT
T ss_pred cccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc-----cCCcEEEEecCCcccCEEEEEEEEeCC
Confidence 33222 122367789999999999999999999999999997655432 245689999999999999999999999
Q ss_pred ceEEEEEEEEeecC
Q psy5280 185 GTARQRVSSGNPAQ 198 (202)
Q Consensus 185 G~~~~~~~L~V~~~ 198 (202)
|....++.|.|..+
T Consensus 402 g~~~~~~~L~V~~~ 415 (527)
T 3qs9_E 402 AQFTKMFTLNIRRK 415 (527)
T ss_dssp EEEEEEEEEC--CC
T ss_pred CcEEEEEEEEEecC
Confidence 99999998888643
No 106
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.56 E-value=7.2e-14 Score=108.63 Aligned_cols=95 Identities=21% Similarity=0.282 Sum_probs=80.5
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccC-CCCCCEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKM-LDRDVGMYEALA 180 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~-~~~D~G~Y~C~a 180 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+.......+.........|.|.++ ...|+|.|+|.|
T Consensus 5 ~~P~~~~~p~~~-~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 5 TPPRFTRTPVDQ-TGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp EEEEEEECCCCE-EEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCeEEeCccee-EEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 478999888887 899999999999999999999999999999876544333333334678999999 599999999999
Q ss_pred EeCCceEEEEEEEEeec
Q psy5280 181 SNEHGTARQRVSSGNPA 197 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~ 197 (202)
.|..|.....+.|.|..
T Consensus 84 ~n~~g~~~~~~~l~V~~ 100 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLR 100 (212)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EcCCCcEEEEEEEEEec
Confidence 99999998888888864
No 107
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.56 E-value=6.1e-14 Score=99.09 Aligned_cols=89 Identities=16% Similarity=0.189 Sum_probs=76.0
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|...+.+. .+.+|+++.|.|.+.|. |.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|
T Consensus 18 ~pp~~~~~~~~~-~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a- 92 (113)
T 2edh_A 18 LPIKFTEGLRNE-EATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQ-DGARCELQIRGLVAEDAGEYLCMC- 92 (113)
T ss_dssp SCCCEEECCCCC-EECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEE-ETTEEEEEECSCCSTTCEEEEEEE-
T ss_pred CCCcccccCCce-EEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEE-CCCEEEEEECCCChhhCEEEEEEe-
Confidence 457888888887 99999999999999875 7899999999998888888743 344668999999999999999999
Q ss_pred eCCceEEEEEEEEeecC
Q psy5280 182 NEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~~ 198 (202)
|.....+.|.|...
T Consensus 93 ---~~~~~~~~l~V~~~ 106 (113)
T 2edh_A 93 ---GKERTSAMLTVRAM 106 (113)
T ss_dssp ---TTEEEEEEEEECCC
T ss_pred ---CCCCEEEEEEEeCC
Confidence 77888888888764
No 108
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.56 E-value=6.6e-14 Score=106.93 Aligned_cols=95 Identities=25% Similarity=0.324 Sum_probs=82.1
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccC-CcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMG-GRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~-~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+... .++.+.....+...|.|.++..+|+|.|+|.|
T Consensus 3 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 3 MAPHFKEELRNL-NVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp CCCEEEECCCCE-EEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCCEEEEcCCcc-EEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 589999888887 8999999999999999999999999999998753 46666444455569999999999999999999
Q ss_pred EeCCceEEEEEEEEeec
Q psy5280 181 SNEHGTARQRVSSGNPA 197 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~ 197 (202)
.|..|..+..+.|.|..
T Consensus 82 ~n~~g~~~~~~~l~V~~ 98 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEV 98 (197)
T ss_dssp EETTEEEEEEEEEEEEE
T ss_pred EECCCceeEEEEEEEcC
Confidence 99999988888888753
No 109
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.56 E-value=1.2e-14 Score=110.06 Aligned_cols=132 Identities=11% Similarity=-0.040 Sum_probs=93.3
Q ss_pred eeeeecCCCCC-eeeecCCCeecCCCCceeeeccccccCCCCC-CCC--------------CCCeEEeccCCeeEEecCC
Q psy5280 57 TQEKLNPERPK-FEPYLPPGVPFHPDKSFYFPRDFDLERPPRE-GYA--------------QAPRFLNQEHDTQYGIKNE 120 (202)
Q Consensus 57 ~~~~~~~~~~~-~~~w~~~g~~~~p~~~~~~~~~~~ie~~~~~-~~~--------------~~P~fi~~~~~~~~v~~G~ 120 (202)
..|.+.+.+.+ .+.|+++|..+......+....+..++.|.| |.+ .++..+ ..... .+.+|+
T Consensus 24 L~C~~~~~~~~~~i~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l~V~~~~~~~-~~~~~-~~~~g~ 101 (176)
T 1f2q_A 24 LTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLL-QASAE-VVMEGQ 101 (176)
T ss_dssp EECCTTCC----CCEEEETTEECSCCSSEEEECSCCGGGCEEEEEECTTSSCCCCEEEEEECSSEEE-EESCS-EEETTS
T ss_pred EEEeCCCCCCcceEEEEECCeECCCCceEEEEeccceecCEEEEEEcCCccccccEEEEEeCcceee-cCCcc-eeeCCC
Confidence 44666676664 6899999999876655555566666666654 211 122222 23334 678999
Q ss_pred eEEEEEEE-EeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce-EEEEEEEEeecC
Q psy5280 121 NSSLFWFV-YGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGT-ARQRVSSGNPAQ 198 (202)
Q Consensus 121 ~v~L~C~v-~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~L~V~~~ 198 (202)
++.|.|.+ .|.|.|.+.|+|+|..+... .....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|..+
T Consensus 102 ~~~l~C~~~~~~p~~~~~W~~~g~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 172 (176)
T 1f2q_A 102 PLFLRCHGWRNWDVYKVIYYKDGEALKYW---------YENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKA 172 (176)
T ss_dssp CEEEEEEEGGGCCEEEEEEEETTEECCSC---------CCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECS
T ss_pred CEEEEEEecCCCCceEEEEEECCEEEeee---------cCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecC
Confidence 99999999 56777899999999987532 23568999999999999999999997554 445578888765
Q ss_pred C
Q psy5280 199 G 199 (202)
Q Consensus 199 ~ 199 (202)
.
T Consensus 173 p 173 (176)
T 1f2q_A 173 P 173 (176)
T ss_dssp C
T ss_pred C
Confidence 3
No 110
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.56 E-value=2.3e-14 Score=101.86 Aligned_cols=91 Identities=25% Similarity=0.294 Sum_probs=69.4
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC-----cEEEEEeeCCeEEEEEc-----cCCCC
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG-----RYDSSYTRNGQATLFIN-----KMLDR 171 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~-----r~~i~~~~~~~~~L~I~-----~~~~~ 171 (202)
.+|.|...+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+.... +... ...+.+.+. ++..+
T Consensus 8 ~pP~i~~~p~~~-~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~v~~~ 82 (117)
T 2v9t_A 8 FPPRIVEHPSDL-IVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML----LPSGSLFFLRIVHGRKSRP 82 (117)
T ss_dssp EEEEEEECCCCE-EECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEE----CTTSCEEESSCCCBTTBCS
T ss_pred CCCeeEcCCCCE-EEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEE----ecCCcEEEEEEEeCCCCcC
Confidence 478888888777 89999999999999999999999999999887542 2222 122333333 55789
Q ss_pred CCEEEEEEEEeCCceEEEE-EEEEeec
Q psy5280 172 DVGMYEALASNEHGTARQR-VSSGNPA 197 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~~~~-~~L~V~~ 197 (202)
|+|.|+|.|.|..|...+. +.|.+..
T Consensus 83 D~G~Y~C~a~N~~G~~~s~~~~l~~~~ 109 (117)
T 2v9t_A 83 DEGVYVCVARNYLGEAVSHDASLEVAA 109 (117)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred cCEEEEEEEEeCccceEeeeEEEEhhh
Confidence 9999999999999988654 5666543
No 111
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.55 E-value=2.2e-14 Score=104.93 Aligned_cols=87 Identities=18% Similarity=0.279 Sum_probs=68.8
Q ss_pred CCCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccC----------CcEEEEE--eeCCeEEEEEcc
Q psy5280 100 YAQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMG----------GRYDSSY--TRNGQATLFINK 167 (202)
Q Consensus 100 ~~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~----------~r~~i~~--~~~~~~~L~I~~ 167 (202)
...+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+... .++.+.. .....+.|.|.+
T Consensus 18 ~~~pP~~~~~p~~~-~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 96 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQ-QRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDT 96 (137)
T ss_dssp ---CCEEEECCCCE-EEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECS
T ss_pred CCCCCeEEcCCCCE-EEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECC
Confidence 34689999999888 8999999999999999999999999987665321 2333311 112356899999
Q ss_pred CCCCCCEEEEEEEEeCCceE
Q psy5280 168 MLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~G~~ 187 (202)
+..+|+|.|+|.|.|..|..
T Consensus 97 v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 97 LVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CCGGGCEEEEEEEECCTTSS
T ss_pred CCcccCEEEEEEEEecCCcc
Confidence 99999999999999999974
No 112
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.55 E-value=1.1e-14 Score=120.34 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=98.9
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc-----------eeeeccccccCCCCC-CCC--------------------CCC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS-----------FYFPRDFDLERPPRE-GYA--------------------QAP 104 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~-----------~~~~~~~~ie~~~~~-~~~--------------------~~P 104 (202)
..|.+.+.+.+.+.|+++|..+..... .+....+..++.|.| |.+ .+|
T Consensus 143 l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p 222 (334)
T 1ry7_B 143 FRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRP 222 (334)
T ss_dssp EECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSC
T ss_pred EEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCC
Confidence 447777888889999999988654321 122344555555554 210 134
Q ss_pred eEEec-cCCeeEEecCCeEEEEEEEEeecCCceEEEe----CCEEcccCCc--EEEEEe------eCCeEEEEEccCCCC
Q psy5280 105 RFLNQ-EHDTQYGIKNENSSLFWFVYGYPKPKVSFYF----NDELIEMGGR--YDSSYT------RNGQATLFINKMLDR 171 (202)
Q Consensus 105 ~fi~~-~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k----~g~~l~~~~r--~~i~~~------~~~~~~L~I~~~~~~ 171 (202)
.+... +.+. .+.+|+.+.|.|.+.|.|.|.+.|+| +|..+..... +.+... ......|.|.++..+
T Consensus 223 ~~~~~~~~~~-~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 301 (334)
T 1ry7_B 223 ILQAGLPANQ-TAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFE 301 (334)
T ss_dssp BCCTTCSCCE-EEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTT
T ss_pred ceEecCCCce-EEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHH
Confidence 44332 3444 78899999999999999999999999 6766654332 111000 011247999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 172 DVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|+|.|+|.|.|..|...+++.|.|...
T Consensus 302 d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 328 (334)
T 1ry7_B 302 DAGEYTCLAGNSIGFSHHSAWLVVLPA 328 (334)
T ss_dssp SCSEEEEEEEESSCCEEEEEEEEEECS
T ss_pred HCEEEEEEEeCCCCeEEEEEEEEEEEC
Confidence 999999999999999999999998754
No 113
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=3.4e-14 Score=98.70 Aligned_cols=91 Identities=14% Similarity=0.078 Sum_probs=77.2
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+|.|+..+.+. .+.+|+++.|.|. .|.|.|.+.|+|++..+..+.++.+. .......|.|.++..+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~-~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~- 81 (103)
T 2dku_A 6 SGANCFTEELTNL-QVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPS-QEGLTLRLTISALEKADSDTYTCD- 81 (103)
T ss_dssp CCCCCCSSCCCCE-EEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEE-EETTEEEEEEESCCTTTCSEEEEE-
T ss_pred CCCCEeEecCCcE-EEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEE-eCCCEEEEEECCCCcccCEEEEEE-
Confidence 3478888888777 8999999999999 59999999999999999888888774 334466899999999999999998
Q ss_pred EeCCceEEEEEEEEeecC
Q psy5280 181 SNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~ 198 (202)
.|.....+.|.|...
T Consensus 82 ---~g~~~~~~~l~V~~~ 96 (103)
T 2dku_A 82 ---IGQAQSRAQLLVQGR 96 (103)
T ss_dssp ---CSSCBCCEEEEEECS
T ss_pred ---eCCceEEEEEEEeCc
Confidence 777777888888754
No 114
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.55 E-value=8.1e-14 Score=108.57 Aligned_cols=94 Identities=16% Similarity=0.266 Sum_probs=79.1
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccC--CcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMG--GRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~--~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.+|.| ..+.+. .+.+|+.+.|.|.+.|.|.|.|.|+|++..+... .++.+. .......|.|.++...|+|.|+|.
T Consensus 18 ~~P~~-~~p~~~-~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (215)
T 3mtr_A 18 YAPKL-QGPVAV-YTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIY-NTPSASYLEVTPDSENDFGNYNCT 94 (215)
T ss_dssp EEEEE-ECCSEE-EECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEE-EETTEEEEEECCCSGGGCEEEEEE
T ss_pred cCCcc-cCCceE-EEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEe-cCCCeeEEEEecCChhhCeEEEEE
Confidence 36777 455565 8899999999999999999999999999999865 455552 234578999999999999999999
Q ss_pred EEeCCceEEEEEEEEeecC
Q psy5280 180 ASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|..|..+..+.|.|...
T Consensus 95 a~n~~g~~~~~~~l~v~~~ 113 (215)
T 3mtr_A 95 AVNRIGQESLEFILVQADT 113 (215)
T ss_dssp EECSSCEEEEEEEEEECCC
T ss_pred EEECCCceEEEEEEEECCC
Confidence 9999999999988888643
No 115
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.55 E-value=1.4e-14 Score=108.58 Aligned_cols=128 Identities=11% Similarity=-0.025 Sum_probs=89.8
Q ss_pred eeeeecCCC-CCeeeecCCCeecCCCCceeeeccccccCCCCC-CC--------------CCCCeEEeccCCeeEEecCC
Q psy5280 57 TQEKLNPER-PKFEPYLPPGVPFHPDKSFYFPRDFDLERPPRE-GY--------------AQAPRFLNQEHDTQYGIKNE 120 (202)
Q Consensus 57 ~~~~~~~~~-~~~~~w~~~g~~~~p~~~~~~~~~~~ie~~~~~-~~--------------~~~P~fi~~~~~~~~v~~G~ 120 (202)
..|.+.+.+ ...+.|+++|..+.......+...+..++.|.| |. ..++.++. .... .+.+|+
T Consensus 24 l~C~~~~~p~~~~~~W~~~g~~~~~~~~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~~~~~-~~~~-~~~~g~ 101 (170)
T 3ry4_A 24 LTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQ-TPHL-EFQEGE 101 (170)
T ss_dssp EEEESCCCSSSSCEEEEETTEECTTCCSSEEEEECCGGGCEEEEEEETTSBCCCCEEEEEECCSEEEE-CSCS-EECTTC
T ss_pred EEEEecCCCCcceEEEEECCeEcccCccceEEEecccccCeEEEEEEeCCCceEeEEEEEECCceEec-CCCc-eeecCC
Confidence 457777775 568899999999876544433344444555543 21 12233332 3334 678899
Q ss_pred eEEEEEEE-EeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce-EEEEEEEEe
Q psy5280 121 NSSLFWFV-YGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGT-ARQRVSSGN 195 (202)
Q Consensus 121 ~v~L~C~v-~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~~~~L~V 195 (202)
++.|.|.+ .|.|.|.+.|++++..+... .....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 102 ~~~l~C~~~~~~p~~~~~W~~~g~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 102 TIMLRCHSWKDKPLVKVTFFQNGKSQKFS---------HLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp CEEEEEEEGGGCCEEEEEEEETTEEEEEE---------SSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEEEECCCCCCCceEEEEECCeEcccc---------CCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 99999999 55677899999999876421 23567999999999999999999999997 444566655
No 116
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.54 E-value=4.5e-16 Score=141.87 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=0.0
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc------------------------------eeeeccccccCCCCC-CC-----
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS------------------------------FYFPRDFDLERPPRE-GY----- 100 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~------------------------------~~~~~~~~ie~~~~~-~~----- 100 (202)
..|.+.+.+.+.+.|+++|..+.+... .+.+..+..++.|.| |.
T Consensus 569 l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 648 (772)
T 3v2a_R 569 LWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRK 648 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCC
Confidence 347778888888999999866432110 022344444555544 21
Q ss_pred ---------------CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEE
Q psy5280 101 ---------------AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFI 165 (202)
Q Consensus 101 ---------------~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I 165 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.|+|+|+|..+..+.++.+. ...+.|.|
T Consensus 649 ~~~~~s~~~~l~v~~~~~P~~~~~~~~~-~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~---~~~~~L~I 724 (772)
T 3v2a_R 649 TKKRHCVVRQLTVLERVAPTITGNLENQ-TTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK---DGNRNLTI 724 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEEEEEEeecccccCCCEeecCCCce-EEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEc---CCCcEEEE
Confidence 1467777666665 8889999999999999999999999999999877666551 23578999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 166 NKMLDRDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
.++..+|+|.|+|.|.|.+|...+++.|.|...
T Consensus 725 ~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 757 (772)
T 3v2a_R 725 RRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGA 757 (772)
T ss_dssp ---------------------------------
T ss_pred CcCCHHHCEEEEEEEEeCCcceeEEEEEEEECC
Confidence 999999999999999999999999999998764
No 117
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.54 E-value=6e-14 Score=118.33 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=97.2
Q ss_pred eeecCCCCCeeeecCCCeecCCC----------CceeeeccccccCCCCC-CCC-----------------CC------C
Q psy5280 59 EKLNPERPKFEPYLPPGVPFHPD----------KSFYFPRDFDLERPPRE-GYA-----------------QA------P 104 (202)
Q Consensus 59 ~~~~~~~~~~~~w~~~g~~~~p~----------~~~~~~~~~~ie~~~~~-~~~-----------------~~------P 104 (202)
|.+.+.+.+.+.|+++|..+.+. ...+....+..++.|.| |.+ .. +
T Consensus 143 C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~ 222 (403)
T 3laf_A 143 CEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQL 222 (403)
T ss_dssp CCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEE
T ss_pred EEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCc
Confidence 66678888899999999886431 11122233444444443 200 11 1
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccC-CcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMG-GRYDSSYTRNGQATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~-~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.++..+.+. .+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+ .....|.|.++..+|+|.|+|.|.|.
T Consensus 223 ~~~~~~~~~-~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~ 297 (403)
T 3laf_A 223 YFLQRPSNV-IAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSL----LGGSNLLISNVTDDDSGTYTCVVTYK 297 (403)
T ss_dssp EEEECCCCE-EEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEE----ETTTEEEECSCCGGGCEEEEEEEEET
T ss_pred eEecCCCce-EecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEE----CCccEEEEeCCCHHHCEEEEEEEEcC
Confidence 334445555 7889999999999999999999999999988754 34444 33568999999999999999999999
Q ss_pred CceEEEEEEEEeec
Q psy5280 184 HGTARQRVSSGNPA 197 (202)
Q Consensus 184 ~G~~~~~~~L~V~~ 197 (202)
.|..+..+.|.|..
T Consensus 298 ~g~~~~~~~l~V~~ 311 (403)
T 3laf_A 298 NENISASAELTVLV 311 (403)
T ss_dssp TEEEEEEEEEEEEE
T ss_pred CCceEEEEEEEEEC
Confidence 99998888888753
No 118
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.53 E-value=9e-14 Score=124.88 Aligned_cols=93 Identities=23% Similarity=0.296 Sum_probs=86.0
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.|+|+|++..|..+.++.+.+ ....++|.|.++...|+|.|+|.|.
T Consensus 481 ~~P~~~~~~~~~-~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~-~~~~~~L~I~~~~~~D~G~Yt~~A~ 558 (573)
T 3uto_A 481 AQPRFIVKPYGT-EVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRY-NGNDYGLTINRVKGDDKGEYTVRAK 558 (573)
T ss_dssp GSCEEEECCCCE-EECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cCCccccCCCCc-EEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEE-cCCEEEEEEcCCCcccCcEEEEEEE
Confidence 478999888888 89999999999999999999999999999999999998855 4568899999999999999999999
Q ss_pred eCCceEEEEEEEEee
Q psy5280 182 NEHGTARQRVSSGNP 196 (202)
Q Consensus 182 N~~G~~~~~~~L~V~ 196 (202)
|..|+.++.+.|.|.
T Consensus 559 N~~G~~~~~v~l~Vt 573 (573)
T 3uto_A 559 NSYGTKEEIVFLNVT 573 (573)
T ss_dssp ETTEEEEEEEEEEEC
T ss_pred eCCCcEEEEEEEEEC
Confidence 999999999999884
No 119
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.53 E-value=4.2e-14 Score=101.92 Aligned_cols=90 Identities=10% Similarity=0.073 Sum_probs=72.2
Q ss_pred ccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcc--------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIE--------MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~--------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+. ...++.+........+|.|.++..+|+|.|.|.|
T Consensus 7 ~~~~~-~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 85 (124)
T 3rbg_A 7 HTETI-TVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLH 85 (124)
T ss_dssp SEEEE-EEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCccE-EEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEE
Confidence 34444 88999999999999999999999998654321 3456666433445689999999999999999999
Q ss_pred EeCCceEEEEEEEEeecCCC
Q psy5280 181 SNEHGTARQRVSSGNPAQGS 200 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~~~ 200 (202)
.|. |.....+.|.|..+..
T Consensus 86 ~n~-g~~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 86 YSD-SVSTKEVKVIVLATMK 104 (124)
T ss_dssp ESS-SEEEEEEEEEEECC--
T ss_pred EcC-CCCcEEEEEEEEeCCC
Confidence 999 9999999999987644
No 120
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.53 E-value=1.8e-13 Score=103.98 Aligned_cols=94 Identities=22% Similarity=0.272 Sum_probs=81.9
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|+..+.+. .+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.+.
T Consensus 6 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (197)
T 3lcy_A 6 EAPGIRKEMKDV-TTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSS-DGRTHTLTVMTEEQEDEGVYTCIAT 83 (197)
T ss_dssp EEEEEEECCCCE-EEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEE-SSSEEEEEEECCSGGGCEEEEEEEE
T ss_pred CCCcccccCCce-EEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEe-CCCEEEEEEecCCccCCEEEEEEEE
Confidence 478888888877 89999999999999999999999999999998888777632 2345689999999999999999999
Q ss_pred eCCceEEEEEEEEeec
Q psy5280 182 NEHGTARQRVSSGNPA 197 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~ 197 (202)
|..|.....+.|.|..
T Consensus 84 n~~~~~~~~~~l~v~~ 99 (197)
T 3lcy_A 84 NEVGEVETSSKLLLQA 99 (197)
T ss_dssp CSSCEEEEEEEEEEEE
T ss_pred CCCCceeEEEEEEEEc
Confidence 9999988888877753
No 121
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.53 E-value=2.1e-13 Score=109.95 Aligned_cols=140 Identities=14% Similarity=0.090 Sum_probs=96.8
Q ss_pred eeeeecCCCCCe-eeec-CCCeecCCCCce-------eeeccccccCCCCC-CC---------------------CCCCe
Q psy5280 57 TQEKLNPERPKF-EPYL-PPGVPFHPDKSF-------YFPRDFDLERPPRE-GY---------------------AQAPR 105 (202)
Q Consensus 57 ~~~~~~~~~~~~-~~w~-~~g~~~~p~~~~-------~~~~~~~ie~~~~~-~~---------------------~~~P~ 105 (202)
..|.+.+.+.+. +.|+ ++|..+.....+ +....+..++.|.| |. ..+|.
T Consensus 109 L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~ 188 (289)
T 3ejj_X 109 LPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQ 188 (289)
T ss_dssp ECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCE
T ss_pred eEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCe
Confidence 347777766654 8997 477665432211 22233444444433 10 14677
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEe-ecCCceEEEeCCEEcccCCcEEEE-EeeCCeEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYG-YPKPKVSFYFNDELIEMGGRYDSS-YTRNGQATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G-~P~P~i~W~k~g~~l~~~~r~~i~-~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
+...+... .+.+|+++.|.|.+.| .|.|.+.|++++..+......... ........|.|.++..+|+|.|+|.|.|.
T Consensus 189 i~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 267 (289)
T 3ejj_X 189 IKLEPSKL-VRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASND 267 (289)
T ss_dssp EEEESSSE-ECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECS
T ss_pred EEecCCce-EEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcC
Confidence 76666665 6678999999999999 799999999999988654322110 00012568999999999999999999999
Q ss_pred CceEEEEEEEEeec
Q psy5280 184 HGTARQRVSSGNPA 197 (202)
Q Consensus 184 ~G~~~~~~~L~V~~ 197 (202)
.|..++++.|.+..
T Consensus 268 ~G~~~~s~~L~~~~ 281 (289)
T 3ejj_X 268 VGTRTATMNFQVVE 281 (289)
T ss_dssp SCEEEEEEEEECC-
T ss_pred CCCccccEEEEEEe
Confidence 99999999998764
No 122
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.52 E-value=3e-14 Score=124.99 Aligned_cols=140 Identities=12% Similarity=0.080 Sum_probs=99.8
Q ss_pred eeeeecCCCCCe-eeecCCCeec--CCC-------------CceeeeccccccCCCCC-CC----------------CCC
Q psy5280 57 TQEKLNPERPKF-EPYLPPGVPF--HPD-------------KSFYFPRDFDLERPPRE-GY----------------AQA 103 (202)
Q Consensus 57 ~~~~~~~~~~~~-~~w~~~g~~~--~p~-------------~~~~~~~~~~ie~~~~~-~~----------------~~~ 103 (202)
..|.+.+.+.+. +.|+++|..+ ... ...+.+..+..++.|.| |. ..+
T Consensus 231 L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 310 (524)
T 2ec8_A 231 VTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDK 310 (524)
T ss_dssp EEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESS
T ss_pred EEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEecc
Confidence 347777777776 9999999873 211 11122344555555554 21 135
Q ss_pred CeEEeccC--CeeEEecCCeEEEEEEEEeecCCc-eEEEeCCEEcccCC-cEEEEEeeC----CeEEEEEccCCCCCCEE
Q psy5280 104 PRFLNQEH--DTQYGIKNENSSLFWFVYGYPKPK-VSFYFNDELIEMGG-RYDSSYTRN----GQATLFINKMLDRDVGM 175 (202)
Q Consensus 104 P~fi~~~~--~~~~v~~G~~v~L~C~v~G~P~P~-i~W~k~g~~l~~~~-r~~i~~~~~----~~~~L~I~~~~~~D~G~ 175 (202)
|.+...+. ....+.+|+.+.|.|.+.|.|.|. +.|+|++..+.... ++... ... ....|.|.++..+|+|.
T Consensus 311 p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~ 389 (524)
T 2ec8_A 311 GFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKS-ENESNIRYVSELHLTRLKGTEGGT 389 (524)
T ss_dssp CEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESC-CSSSCCEEEEEEEECSCCGGGCEE
T ss_pred CceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEE-ccCCCceeEEEEEEeecCcccCeE
Confidence 55544333 233888999999999999999999 99999999887654 33321 111 24689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEeec
Q psy5280 176 YEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 176 Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
|+|.|.|..|..+.++.|.|..
T Consensus 390 Y~C~a~N~~g~~~~~~~l~V~~ 411 (524)
T 2ec8_A 390 YTFLVSNSDVNAAIAFNVYVNT 411 (524)
T ss_dssp EEEEEECSSCEEEEEEEEEECE
T ss_pred EEEEEEecCceEEEEEEEEEec
Confidence 9999999999999999888764
No 123
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.52 E-value=1e-14 Score=112.31 Aligned_cols=138 Identities=11% Similarity=-0.009 Sum_probs=94.2
Q ss_pred eeeeecCCCCCeeeecCCCeecC------------CCC------ceeeeccccccCCCCC-CC-----------------
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFH------------PDK------SFYFPRDFDLERPPRE-GY----------------- 100 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~------------p~~------~~~~~~~~~ie~~~~~-~~----------------- 100 (202)
..|.+.+.+.+.+.|++++..+. ... ..+....+..++.|.| |.
T Consensus 21 L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~ 100 (212)
T 1f97_A 21 LTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLT 100 (212)
T ss_dssp EECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEE
T ss_pred EEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEE
Confidence 55888888888999999886521 000 1122244444554443 21
Q ss_pred -CCCCeEEeccCCeeEEecCCeEEEEEE-EEeecCCceEEEeCCE-EcccCCc---------EEEEEeeCCeEEEEEccC
Q psy5280 101 -AQAPRFLNQEHDTQYGIKNENSSLFWF-VYGYPKPKVSFYFNDE-LIEMGGR---------YDSSYTRNGQATLFINKM 168 (202)
Q Consensus 101 -~~~P~fi~~~~~~~~v~~G~~v~L~C~-v~G~P~P~i~W~k~g~-~l~~~~r---------~~i~~~~~~~~~L~I~~~ 168 (202)
..+|.+...+... .+.+|+.+.|.|. +.|.|.|.+.|++++. .+..... +.+ ......|.|.++
T Consensus 101 V~~~p~~~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~L~i~~~ 176 (212)
T 1f97_A 101 VLVPPSKPTISVPS-SVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTI---DPKSGDLIFDPV 176 (212)
T ss_dssp EEBCCCCCEEECCS-EEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEE---CTTTCCEEESSC
T ss_pred EEcCCCCcccCCcc-ccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEe---cCCCceEEEEec
Confidence 1234443333344 6789999999999 7999999999999999 7765332 222 234578999999
Q ss_pred CCCCCEEEEEEEEeCCceE--EEEEEEEeecC
Q psy5280 169 LDRDVGMYEALASNEHGTA--RQRVSSGNPAQ 198 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G~~--~~~~~L~V~~~ 198 (202)
..+|+|.|+|.|.|..|.. +..+.|.|...
T Consensus 177 ~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 208 (212)
T 1f97_A 177 TAFDSGEYYCQAQNGYGTAMRSEAAHMDAVEL 208 (212)
T ss_dssp CGGGCEEEEEEEECSSSCCEECCCEEEEEESS
T ss_pred ChhhCcEEEEEEccccCCccccceEEEEEEEe
Confidence 9999999999999999988 55677777654
No 124
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.52 E-value=7.7e-14 Score=97.69 Aligned_cols=89 Identities=18% Similarity=0.232 Sum_probs=73.5
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
+.+|.|+..+.+. .+.+|+++.|.|.+.|. |.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|
T Consensus 6 ~~pp~~~~~~~~~-~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a 81 (108)
T 2dm7_A 6 SGPARFTQDLKTK-EASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQ-DGTRCELQIHDLSVADAGEYSCMC 81 (108)
T ss_dssp CCCCCBCSCCBCC-EEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEE-ETTEEEEEESSCCTTTCSEEEEEE
T ss_pred CCCCeeeecCCcE-EEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEe-cCCEEEEEECCCCcccCEEEEEEE
Confidence 4688888877777 89999999999999875 7899999999998888887743 344678999999999999999999
Q ss_pred EeCCceEEEEEEEEeec
Q psy5280 181 SNEHGTARQRVSSGNPA 197 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~ 197 (202)
.| ....+.|.|..
T Consensus 82 ~n----~~~~~~l~V~~ 94 (108)
T 2dm7_A 82 GQ----ERTSATLTVRA 94 (108)
T ss_dssp TT----EEEEEECEEEC
T ss_pred cC----CEEEEEEEEec
Confidence 54 56667777765
No 125
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.52 E-value=1.1e-13 Score=106.48 Aligned_cols=136 Identities=9% Similarity=-0.034 Sum_probs=87.9
Q ss_pred eeeeecCCCCCeeeecCCCeecCCC---------CceeeeccccccCCCCC-CC---------------------CCCCe
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPD---------KSFYFPRDFDLERPPRE-GY---------------------AQAPR 105 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~---------~~~~~~~~~~ie~~~~~-~~---------------------~~~P~ 105 (202)
..|.+.+ +.+.+.|+|+|..+... ...+.+..+..++.|.| |. ..+|.
T Consensus 24 L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~ 102 (196)
T 3p2t_A 24 IWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPT 102 (196)
T ss_dssp EEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCE
T ss_pred EEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCE
Confidence 4476666 56678899999876431 12233344455555543 21 01344
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
+...+ .. .+.+|+++.|.|.+.+. .+.+.|+|++..+.................|.|.++..+|+|.|+|.|.|..+
T Consensus 103 ~~~~~-~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 103 LSALP-SP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEES-CS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred EEeCC-cc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 43333 23 57899999999999985 46899999998775433221111112357899999999999999999999987
Q ss_pred -----eEEEEEEEEee
Q psy5280 186 -----TARQRVSSGNP 196 (202)
Q Consensus 186 -----~~~~~~~L~V~ 196 (202)
..+..+.|.|.
T Consensus 180 ~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 180 HYLLSHPSDPLELIVS 195 (196)
T ss_dssp TTEECCCCCCEEEEEC
T ss_pred CcccCCCCCCEEEEeC
Confidence 23344566654
No 126
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.52 E-value=9.9e-14 Score=124.56 Aligned_cols=178 Identities=12% Similarity=0.090 Sum_probs=118.2
Q ss_pred CCCCcccccCCCCCCCCCCCCCCCCC----CC------------cccCCCCCCC-----ccCCeeeec------c-c--e
Q psy5280 7 PERPKFEPYLPPGVPFHPDKSFYFPR----DF------------DLERPPREGY-----AQAPRFLNQ------E-H--D 56 (202)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------------~~~r~~~~~~-----~~~p~f~~~------~-~--~ 56 (202)
-.|++.+.|.++|..+..+..+.+.. |- ..++...... ..+|.+... + + .
T Consensus 407 g~p~~~i~W~~~g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~ 486 (642)
T 1e07_A 407 SNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVA 486 (642)
T ss_pred ccCCCeEEEEECCEEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEE
Confidence 45788999999999987766655432 10 0111100000 012333211 1 1 1
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCc--------eeeeccccccCCCCC-CC------------------CCCCeEEec
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKS--------FYFPRDFDLERPPRE-GY------------------AQAPRFLNQ 109 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~--------~~~~~~~~ie~~~~~-~~------------------~~~P~fi~~ 109 (202)
..|.+. .+.+.+.|+++|.++..... .+....+..++.|.| |. ..++.++..
T Consensus 487 l~C~~~-~~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~ 565 (642)
T 1e07_A 487 FTCEPE-AQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIIS 565 (642)
T ss_pred EEEECC-CCCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceec
Confidence 346666 36678899999998765322 222344444555544 21 012334444
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
+.+. .+.+|+.+.|.|.+.|.|.|.++|+|+|..+.. ...|.|.++..+|+|.|+|.|.|.+|...+
T Consensus 566 ~~~~-~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~------------~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 632 (642)
T 1e07_A 566 PPDS-SYLSGANLNLSCHSASNPSPQYSWRINGIPQQH------------TQVLFIAKITPNNNGTYACFVSNLATGRNN 632 (642)
T ss_pred CCce-eEEcCCcEEEEEEeccCCCCeEEEEECCEECcc------------CceEEECcccccCCeEEEEEEEecccCcce
Confidence 5555 888999999999999999999999999987653 246899999999999999999999999999
Q ss_pred EEEEEeecC
Q psy5280 190 RVSSGNPAQ 198 (202)
Q Consensus 190 ~~~L~V~~~ 198 (202)
++.|.|...
T Consensus 633 s~~l~V~v~ 641 (642)
T 1e07_A 633 SIVKSITVS 641 (642)
T ss_pred eEEEEEEEc
Confidence 998888654
No 127
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.52 E-value=2e-13 Score=111.12 Aligned_cols=95 Identities=25% Similarity=0.324 Sum_probs=82.4
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccC-CcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMG-GRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~-~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+... .++.+.....+...|.|.++..+|+|.|+|.|
T Consensus 3 ~~P~~~~~p~~~-~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 3 MAPHFKEELRNL-NVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCEEEECCCCE-EECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCeeeecccce-EEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 489999888887 9999999999999999999999999999998754 45665444455679999999999999999999
Q ss_pred EeCCceEEEEEEEEeec
Q psy5280 181 SNEHGTARQRVSSGNPA 197 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~ 197 (202)
.|..|..+..+.|.|..
T Consensus 82 ~n~~g~~~~~~~l~V~~ 98 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEV 98 (305)
T ss_dssp EETTEEEEEEEEEEECE
T ss_pred EcCCCCccceEEEEEec
Confidence 99999988888888753
No 128
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.52 E-value=1.2e-13 Score=111.61 Aligned_cols=126 Identities=12% Similarity=0.057 Sum_probs=92.3
Q ss_pred eeeeecCCC-CCeeeecC-CCeecCCCCc------------eeeeccccccCCCCC-CC-----------------CCCC
Q psy5280 57 TQEKLNPER-PKFEPYLP-PGVPFHPDKS------------FYFPRDFDLERPPRE-GY-----------------AQAP 104 (202)
Q Consensus 57 ~~~~~~~~~-~~~~~w~~-~g~~~~p~~~------------~~~~~~~~ie~~~~~-~~-----------------~~~P 104 (202)
..|.+.+.+ .+.+.|++ +|..+.+... .+.+..+..++.|.| |. ..+|
T Consensus 22 l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~ 101 (291)
T 1qz1_A 22 FLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKL 101 (291)
T ss_dssp EEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCS
T ss_pred EEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccc
Confidence 558888876 57899999 8887654321 122344444555544 21 1356
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc--CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM--GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~--~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
.|...+... .+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.. ...+.|.|.++...|+|.|+|.|.|
T Consensus 102 ~~~~~~~~~-~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n 176 (291)
T 1qz1_A 102 MFKNAPTPQ-EFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIV----LSNNYLQIRGIKKTDEGTYRCEGRI 176 (291)
T ss_dssp EEEECCSSE-EEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEE----CTTSCEEETTCCGGGCEEEEEEEEE
T ss_pred cccCCCCcc-cccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEE----ccCCcEEEccCccccCeEEEEEEEe
Confidence 666666666 889999999999999999999999999988754 334444 3456899999999999999999999
Q ss_pred CCceE
Q psy5280 183 EHGTA 187 (202)
Q Consensus 183 ~~G~~ 187 (202)
..+..
T Consensus 177 ~~~~~ 181 (291)
T 1qz1_A 177 LARGE 181 (291)
T ss_dssp GGGTE
T ss_pred cCCCc
Confidence 87543
No 129
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.52 E-value=1.5e-13 Score=107.18 Aligned_cols=141 Identities=9% Similarity=-0.106 Sum_probs=90.9
Q ss_pred eeeeecCCCCCeeeecC---CCeecCCCCc-------eeeeccccccCCCCC-CCC-------------------CCCeE
Q psy5280 57 TQEKLNPERPKFEPYLP---PGVPFHPDKS-------FYFPRDFDLERPPRE-GYA-------------------QAPRF 106 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~---~g~~~~p~~~-------~~~~~~~~ie~~~~~-~~~-------------------~~P~f 106 (202)
..|.+.+ +.+.+.|.+ +|..+..... .+.+..+..++.|.| |.+ .+|.+
T Consensus 29 L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~ 107 (213)
T 2x1w_L 29 IPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDV 107 (213)
T ss_dssp ECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEE
T ss_pred EeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccce
Confidence 4576665 556788977 4665432211 122344555666654 211 12333
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecC--CceEEEeCCEEcccCCc-EEEEEe------eCCeEEEEEccCCCCCCEEEE
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPK--PKVSFYFNDELIEMGGR-YDSSYT------RNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~--P~i~W~k~g~~l~~~~r-~~i~~~------~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
...+.....+.+|+++.|.|.+.|.|. +.+.|++++..+..... ...... ......|.|.++..+|+|.|+
T Consensus 108 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 187 (213)
T 2x1w_L 108 VLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYT 187 (213)
T ss_dssp EEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEE
T ss_pred EEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEE
Confidence 333333337889999999999999764 47999999876432211 100000 011457999999999999999
Q ss_pred EEEEeCCceEEEEEEEEeecC
Q psy5280 178 ALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 178 C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|.|..|..++++.|.|...
T Consensus 188 C~a~N~~g~~~~~~~l~V~~~ 208 (213)
T 2x1w_L 188 CAASSGLMTKKNSTFVRVHED 208 (213)
T ss_dssp EEEECSSCEEEEEEEEEEEC-
T ss_pred EEEecCCCcEEEEEEEEEecc
Confidence 999999999999999999864
No 130
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.52 E-value=1.8e-13 Score=104.07 Aligned_cols=94 Identities=23% Similarity=0.370 Sum_probs=80.1
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC--cEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG--RYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~--r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+.... ++.+.. ......|.|.++...|+|.|+|.
T Consensus 4 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~ 81 (194)
T 2a38_A 4 QAPTFTQPLQSV-VVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISF-SDGRAKLTIPAVTKANSGRYSLK 81 (194)
T ss_dssp EEEEEEECCCCE-EEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEE-ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEccCCce-EEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEe-CCCEEEEEECCCCcccCEEEEEE
Confidence 478888888877 89999999999999999999999999998887643 444422 34567999999999999999999
Q ss_pred EEeCCceEEEEEEEEeec
Q psy5280 180 ASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~ 197 (202)
+.|..|.....+.|.|..
T Consensus 82 ~~n~~~~~~~~~~l~v~~ 99 (194)
T 2a38_A 82 ATNGSGQATSTAELLVKA 99 (194)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEcCCceEeEEEEEEEcc
Confidence 999999988888888763
No 131
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=1.6e-13 Score=96.67 Aligned_cols=91 Identities=10% Similarity=0.045 Sum_probs=71.6
Q ss_pred CCCeEEeccCCe--eEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 102 QAPRFLNQEHDT--QYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 102 ~~P~fi~~~~~~--~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.+|.++..+.+. ..+.+|+++.|.|.+. .|.|.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.
T Consensus 9 ~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~ 86 (113)
T 2cpc_A 9 DVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQK-EDTVRRLVLPAVQLEDSGEYLCE 86 (113)
T ss_dssp SCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEE-CSSEEEEEESSCCTTTCEEEEEE
T ss_pred cCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEE-CCCEEEEEECCCCcccCEEEEEE
Confidence 466666655541 2678999999999995 8999999999999998877777632 23357899999999999999999
Q ss_pred EEeCCceEEEEEEEEeecC
Q psy5280 180 ASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~~ 198 (202)
|.| .+..+.|.|..+
T Consensus 87 a~n----~~~~~~l~V~~~ 101 (113)
T 2cpc_A 87 IDD----ESASFTVTVTEP 101 (113)
T ss_dssp SSS----CEEEEEEEEECC
T ss_pred Eec----CcEEEEEEEecC
Confidence 999 455667776643
No 132
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.51 E-value=5.8e-14 Score=111.60 Aligned_cols=131 Identities=12% Similarity=0.009 Sum_probs=99.0
Q ss_pred eeeeecCCCCC-eeeecCCCeecCCCCceeeeccccccCCCCC-CCC-------------CCCeEEeccCCeeEEecCCe
Q psy5280 57 TQEKLNPERPK-FEPYLPPGVPFHPDKSFYFPRDFDLERPPRE-GYA-------------QAPRFLNQEHDTQYGIKNEN 121 (202)
Q Consensus 57 ~~~~~~~~~~~-~~~w~~~g~~~~p~~~~~~~~~~~ie~~~~~-~~~-------------~~P~fi~~~~~~~~v~~G~~ 121 (202)
..|.+.+.+.+ .+.|+++|..+......+....+..++.|.| |.+ ..+.++..+... .+.+|+.
T Consensus 21 l~C~~~~~~~~~~~~W~~~g~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~~~~~~~~~-~~~~g~~ 99 (262)
T 3rjd_A 21 LHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSR-VFTEGEP 99 (262)
T ss_dssp EEEECSSCCCTTCEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEEECSSEEEEESCS-EEETTSC
T ss_pred EEEECCCCCCCceEEEEECCEEeeccCCeEEEecCCcccCeEEEEEEecCCccccEEEEEeccceEecCCCe-EEecCCe
Confidence 55777777776 8999999999876655555566666666654 210 112233344445 6789999
Q ss_pred EEEEEEE-EeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEeec
Q psy5280 122 SSLFWFV-YGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 122 v~L~C~v-~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
+.|.|.+ .|.|.+.+.|++++..+... .....|.|.++...|+|.|+|.|.|..|..+..+.|.|..
T Consensus 100 v~l~C~~~~~~p~~~v~W~~~g~~~~~~---------~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~ 167 (262)
T 3rjd_A 100 LALRCHAWKDKLVYNVLYYRNGKAFKFF---------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKE 167 (262)
T ss_dssp EEEEEEEGGGCCCEEEEEEETTEEEEEE---------EECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEEC
T ss_pred EEEEEEccCCCCCceEEEEECCcccccc---------CCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEecc
Confidence 9999999 78888999999999887431 1245799999999999999999999999888888888874
No 133
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.51 E-value=2e-14 Score=124.35 Aligned_cols=137 Identities=8% Similarity=-0.047 Sum_probs=90.9
Q ss_pred eeeeecC-CCCCeeeecCCCeecCCCC----------------ceeeeccccccCCCCC-CCC-------------CCCe
Q psy5280 57 TQEKLNP-ERPKFEPYLPPGVPFHPDK----------------SFYFPRDFDLERPPRE-GYA-------------QAPR 105 (202)
Q Consensus 57 ~~~~~~~-~~~~~~~w~~~g~~~~p~~----------------~~~~~~~~~ie~~~~~-~~~-------------~~P~ 105 (202)
..|.+.+ .+.+.+.|+++|..+.... ..+.+..+..++.|.| |.+ .+|.
T Consensus 247 L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V~~~p~ 326 (423)
T 3qs7_E 247 IRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGF 326 (423)
T ss_dssp EEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEEESSCE
T ss_pred EEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEEEeCCc
Confidence 4577787 5668899999998764421 1123344555566654 211 2444
Q ss_pred EEecc-CCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 106 FLNQE-HDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 106 fi~~~-~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
+...+ .....+.+|+++.|.|.+.|.|.|.++|+|+|..|..+.... .....+.+.....+|+|.|+|.|.|..
T Consensus 327 i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~-----~~~~~~~~~~~~~~D~G~YtC~A~N~~ 401 (423)
T 3qs7_E 327 INATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL-----DNGYSISKFCNHKHQPGEYIFHAENDD 401 (423)
T ss_dssp EEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC-----SSSSEEEEECCCTTCCSCEEEEEEETT
T ss_pred ceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccc-----cCCcEEEEEecccccCEEEEEEEEcCC
Confidence 43322 123367789999999999999999999999999986543110 112222235566789999999999999
Q ss_pred ceEEEEEEEEeecC
Q psy5280 185 GTARQRVSSGNPAQ 198 (202)
Q Consensus 185 G~~~~~~~L~V~~~ 198 (202)
|.++.++.|.|...
T Consensus 402 G~~~~s~~L~v~~~ 415 (423)
T 3qs7_E 402 AQFTKMFTLNIRSG 415 (423)
T ss_dssp EEEEEEEEEC----
T ss_pred ceEEEEEEEEEecC
Confidence 99999999988754
No 134
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.51 E-value=1.3e-14 Score=111.40 Aligned_cols=82 Identities=10% Similarity=-0.025 Sum_probs=62.8
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSG 194 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~ 194 (202)
.+..|+.+.+.|.+.|.|.|.|+|++++..+...............+.|.|..+...|.|.|+|.|.|.+|.....+.|.
T Consensus 129 ~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~ 208 (218)
T 4frw_A 129 EEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHI 208 (218)
T ss_dssp ETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred eeeeccccceeeeccCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEE
Confidence 56679999999999999999999999988776543332200001135799999999999999999999999876666555
Q ss_pred ee
Q psy5280 195 NP 196 (202)
Q Consensus 195 V~ 196 (202)
|.
T Consensus 209 v~ 210 (218)
T 4frw_A 209 LH 210 (218)
T ss_dssp CC
T ss_pred EE
Confidence 43
No 135
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.50 E-value=1.9e-14 Score=110.76 Aligned_cols=79 Identities=8% Similarity=-0.043 Sum_probs=64.8
Q ss_pred EEecCCeEEEEEEE-EeecCCceEEEeC--CEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy5280 115 YGIKNENSSLFWFV-YGYPKPKVSFYFN--DELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRV 191 (202)
Q Consensus 115 ~v~~G~~v~L~C~v-~G~P~P~i~W~k~--g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~ 191 (202)
.+.+|+.+.|.|.+ .|.|.|.++|+++ +..+....... .....|.|.++..+|+|.|+|.|.|..|..++++
T Consensus 132 ~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~ 206 (214)
T 3jz7_A 132 SEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAE-----MTSPVISVKNASSEYSGTYSCTVQNRVGSDQCML 206 (214)
T ss_dssp CCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGGG-----TTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred ceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccceec-----cCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEE
Confidence 46789999999999 8999999999995 34443322221 2356899999999999999999999999999999
Q ss_pred EEEeecC
Q psy5280 192 SSGNPAQ 198 (202)
Q Consensus 192 ~L~V~~~ 198 (202)
.|.|..+
T Consensus 207 ~l~V~~P 213 (214)
T 3jz7_A 207 RLDVVPP 213 (214)
T ss_dssp EECCBCC
T ss_pred EEEEeCC
Confidence 9998754
No 136
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.49 E-value=1.7e-13 Score=105.60 Aligned_cols=136 Identities=10% Similarity=-0.103 Sum_probs=82.0
Q ss_pred eeeeecCCCCCeeeecCCCeecCC---------CCceeeeccccccCCCCC-CC--------------------C--CCC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHP---------DKSFYFPRDFDLERPPRE-GY--------------------A--QAP 104 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p---------~~~~~~~~~~~ie~~~~~-~~--------------------~--~~P 104 (202)
..|.+.+.+. .+.|+|+|..+.. ....+.+..+..++.|.| |. . .+|
T Consensus 24 L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p 102 (198)
T 1ugn_A 24 LRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKP 102 (198)
T ss_dssp EEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCC
T ss_pred EEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCC
Confidence 4577777665 5899999987521 112233334444444432 10 0 123
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCc-EEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGR-YDSSYTRNGQATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r-~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.+... .+. .+.+|+++.|.|.+.|. .|.+.|+|++..+..... +.+.........|.|.++..+|+|.|+|.|.|.
T Consensus 103 ~i~~~-~~~-~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 179 (198)
T 1ugn_A 103 TLSAQ-PSP-VVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDS 179 (198)
T ss_dssp EEEEE-SCS-EEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECT
T ss_pred ccccC-Ccc-ccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeC
Confidence 33322 234 78899999999999998 789999999988754321 111111123578999999999999999999999
Q ss_pred CceE-----EEEEEEEee
Q psy5280 184 HGTA-----RQRVSSGNP 196 (202)
Q Consensus 184 ~G~~-----~~~~~L~V~ 196 (202)
.+.. +..+.|.|.
T Consensus 180 ~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 180 NSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp TSTTEECCCCCCEEEEEE
T ss_pred CCCccccCcCceEEEEec
Confidence 7632 445666664
No 137
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.49 E-value=1.2e-13 Score=117.07 Aligned_cols=78 Identities=23% Similarity=0.259 Sum_probs=64.9
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeC-CEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFN-DELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSS 193 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~-g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L 193 (202)
.+.+|+++.|.|.+.|.|.|.+.|+|+ +..+....+. . ...+.|.|.++..+|+|.|+|.|.|..|.....+.|
T Consensus 216 ~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~-~----~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 290 (384)
T 3kld_A 216 PAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARR-H----KSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 290 (384)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEE-C----TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EecCCCcEEEEEEEeecCCCcEEEEeCCCcccccccee-c----CCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEE
Confidence 678899999999999999999999995 4455433222 1 346789999999999999999999999999888888
Q ss_pred Eeec
Q psy5280 194 GNPA 197 (202)
Q Consensus 194 ~V~~ 197 (202)
.|..
T Consensus 291 ~v~~ 294 (384)
T 3kld_A 291 TFYA 294 (384)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7753
No 138
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.49 E-value=2.7e-13 Score=117.15 Aligned_cols=135 Identities=10% Similarity=-0.037 Sum_probs=86.5
Q ss_pred eeeeecCCCCCeeeecCCCeecCCC-----Ccee-eeccccccCCCCC-CCC-----------------CCCeEEeccCC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPD-----KSFY-FPRDFDLERPPRE-GYA-----------------QAPRFLNQEHD 112 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~-----~~~~-~~~~~~ie~~~~~-~~~-----------------~~P~fi~~~~~ 112 (202)
..|.+.|.|.+.+.|+++|..+... .... ....+..++.|.| |.+ .+|.+ .+.+
T Consensus 159 L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~~~~ 236 (423)
T 3qs7_E 159 LVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQ 236 (423)
T ss_dssp EEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS--STTE
T ss_pred EEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc--CCCc
Confidence 5688899999999999998753210 0000 0111223344433 211 12222 2233
Q ss_pred eeEEecCCeEEEEEEEEe-ecCCceEEEeCCEEcccCCcEEEEEee-----CCeEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 113 TQYGIKNENSSLFWFVYG-YPKPKVSFYFNDELIEMGGRYDSSYTR-----NGQATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 113 ~~~v~~G~~v~L~C~v~G-~P~P~i~W~k~g~~l~~~~r~~i~~~~-----~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
. .+.+|+.+.|.|.+.| .|.|.|+|+|++..+.....+...... .....|.|.++..+|+|.|+|.|.|.
T Consensus 237 ~-~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~--- 312 (423)
T 3qs7_E 237 L-FLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH--- 312 (423)
T ss_dssp E-EEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---
T ss_pred e-EEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---
Confidence 4 7889999999999999 677999999999887655433221111 12357999999999999999999998
Q ss_pred EEEEEEEEeec
Q psy5280 187 ARQRVSSGNPA 197 (202)
Q Consensus 187 ~~~~~~L~V~~ 197 (202)
.+..+.|.|..
T Consensus 313 ~~~~~~L~V~~ 323 (423)
T 3qs7_E 313 PSQSALVTIVE 323 (423)
T ss_dssp EEEEEEEEEES
T ss_pred CCceEEEEEEe
Confidence 66677777754
No 139
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.49 E-value=6.2e-14 Score=106.55 Aligned_cols=132 Identities=10% Similarity=-0.013 Sum_probs=93.0
Q ss_pred eeeeecCCCCCeeeecCCCee--cC------------------CC-------CceeeeccccccCCCCC-CCCCCC----
Q psy5280 57 TQEKLNPERPKFEPYLPPGVP--FH------------------PD-------KSFYFPRDFDLERPPRE-GYAQAP---- 104 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~--~~------------------p~-------~~~~~~~~~~ie~~~~~-~~~~~P---- 104 (202)
..|.+.+.+.+.+.|++++.. +. .. ...+.+..+..++.|.| |.+.-.
T Consensus 15 L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 94 (184)
T 2ny1_B 15 LTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEV 94 (184)
T ss_dssp ECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEEETTEEEEE
T ss_pred EEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEEEEcCCCcE
Confidence 457777778888999999852 10 00 11122344555555554 221110
Q ss_pred ----eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 105 ----RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 105 ----~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+..+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+ . .....|.|.++..+|+|.|+|.|
T Consensus 95 ~l~V~~~~~~~~~-~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~------~-----~~~~~L~i~~v~~~d~G~Y~C~a 162 (184)
T 2ny1_B 95 QLLVFGLTANSDT-HLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------I-----QGGKTLSVSQLELQDSGTWTCTV 162 (184)
T ss_dssp EEEEEEEEESSCS-EEETTCCEEEEEECCTTCCCEEEEECTTSCE------E-----EESSEEEESSCCGGGCEEEEEEE
T ss_pred EEEEEEecCCCCc-eeecCCCEEEEEEcCCCCCCEEEEEeCCCcc------c-----cCceEEEEecCCcCCCeEEEEEE
Confidence 112234444 7889999999999999999999999987543 1 12468999999999999999999
Q ss_pred EeCCceEEEEEEEEeecCCC
Q psy5280 181 SNEHGTARQRVSSGNPAQGS 200 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~~~ 200 (202)
.|..|..+..+.|.|.+..+
T Consensus 163 ~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 163 LQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp EETTEEEEEEEEEEEECCCC
T ss_pred EECCceEEEEEEEEEEecCC
Confidence 99999999999999987543
No 140
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=2e-14 Score=98.85 Aligned_cols=84 Identities=13% Similarity=0.178 Sum_probs=68.7
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|...+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+... ....|.|.++...|+|.|+|.|.
T Consensus 9 ~~~~i~~~p~~~-~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~----------~~~~L~i~~v~~~d~G~Y~C~a~ 77 (96)
T 2ens_A 9 EEVQLVVEPEGG-AVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP----------PSPVLILPEIGPQDQGTYSCVAT 77 (96)
T ss_dssp CSCCCEEESTTS-EECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC----------CCSEEEEESCCTTTCEEEECEEC
T ss_pred CCCEEEECCCCC-EEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC----------CCCEEEECCCCcccCEEEEEEEE
Confidence 356777777777 8899999999999999999999999999877543 24579999999999999999999
Q ss_pred eCCceEEE--EEEEEee
Q psy5280 182 NEHGTARQ--RVSSGNP 196 (202)
Q Consensus 182 N~~G~~~~--~~~L~V~ 196 (202)
|..|.... .+.|.|.
T Consensus 78 n~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 78 HSSHGPQESRAVSISII 94 (96)
T ss_dssp CSSCCCEECCCEEEEEC
T ss_pred eCCCCcEEEEEEEEEEe
Confidence 97765444 4455554
No 141
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.48 E-value=1.6e-14 Score=117.86 Aligned_cols=137 Identities=12% Similarity=0.076 Sum_probs=95.9
Q ss_pred eeeeecCC-CCCeeeecCCCeecCCCCc--------eeeeccccccCCCCC-CCCC----------------CCeEEecc
Q psy5280 57 TQEKLNPE-RPKFEPYLPPGVPFHPDKS--------FYFPRDFDLERPPRE-GYAQ----------------APRFLNQE 110 (202)
Q Consensus 57 ~~~~~~~~-~~~~~~w~~~g~~~~p~~~--------~~~~~~~~ie~~~~~-~~~~----------------~P~fi~~~ 110 (202)
..|.+.+. +.+.+.|+++|..+..... .+....+..++.|.| |.+. +|.++..+
T Consensus 26 l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~ 105 (317)
T 2y25_A 26 LKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEV 105 (317)
T ss_dssp EEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHHHHHHHHH
T ss_pred EEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecCccccccC
Confidence 44777777 6678999999988765322 233355666666665 2110 01111111
Q ss_pred CCeeEEecCCeEEEEEEEEe----------ecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 111 HDTQYGIKNENSSLFWFVYG----------YPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 111 ~~~~~v~~G~~v~L~C~v~G----------~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.+. .+..|+.+.|.|.+.| .|.|.+.|++++..+..+.++.+.. ......|.|.++...|+|.|+|.|
T Consensus 106 ~~~-~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a 183 (317)
T 2y25_A 106 CKK-IALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGV-TGEQIWLQINEPTPNDKGKYVMEL 183 (317)
T ss_dssp HHH-HHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEE-CSSEEEEEEESCCGGGCEEEEEEE
T ss_pred Cce-ecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEec-cCCEEEEEECcCCcccCeeEEEEE
Confidence 112 3346777777777776 7899999999999998877777632 234567999999999999999999
Q ss_pred EeCCceEEEEEEEEe
Q psy5280 181 SNEHGTARQRVSSGN 195 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V 195 (202)
.|..|....++.|.|
T Consensus 184 ~n~~g~~~~~~~l~v 198 (317)
T 2y25_A 184 FDGKTGHQKTVDLSG 198 (317)
T ss_dssp ECSSCEEEEEEEECH
T ss_pred EeCCceEEEEEEEee
Confidence 999999988887765
No 142
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.48 E-value=7.3e-13 Score=101.19 Aligned_cols=94 Identities=16% Similarity=0.210 Sum_probs=76.0
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEE-eecCCceEEEeCCEEcccCC--cEEEEEeeCC------eEEEEEccCCCCCC
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVY-GYPKPKVSFYFNDELIEMGG--RYDSSYTRNG------QATLFINKMLDRDV 173 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~-G~P~P~i~W~k~g~~l~~~~--r~~i~~~~~~------~~~L~I~~~~~~D~ 173 (202)
+|.|+..+.+. .+.+|+++.|.|.+. |.|.|.+.|+|++..+.... ++.+...... .+.|.|.++...|+
T Consensus 2 ~~~~~~~p~~~-~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 2 ESPFVGNPGNI-TGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCSEEECCCCE-EECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCeeccChhhe-EEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 68899888888 999999999999999 99999999999999988763 3433211110 46899999999999
Q ss_pred EEEEEEEEeCCceEEEE-EEEEeec
Q psy5280 174 GMYEALASNEHGTARQR-VSSGNPA 197 (202)
Q Consensus 174 G~Y~C~a~N~~G~~~~~-~~L~V~~ 197 (202)
|.|+|.|.|..|..... +.|.|..
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~ 105 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEG 105 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECC
T ss_pred cEEEEEEEeCCCceecccEEEEEec
Confidence 99999999998876544 6666653
No 143
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.48 E-value=1.8e-13 Score=97.79 Aligned_cols=85 Identities=14% Similarity=-0.005 Sum_probs=64.3
Q ss_pred eEEecCCeEEEEEEEEeec--CCceEEEeCCEEccc-----CCcEEEEEe--eCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 114 QYGIKNENSSLFWFVYGYP--KPKVSFYFNDELIEM-----GGRYDSSYT--RNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g~~l~~-----~~r~~i~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
..+.+|+++.|.|.+.|.| .+.+.|++++..+.. ..+...... ....+.|.|.++..+|+|.|+|.|.|..
T Consensus 18 v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 97 (122)
T 3s35_X 18 IELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL 97 (122)
T ss_dssp EEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSS
T ss_pred EEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCC
Confidence 3788999999999999955 467899999874421 111111000 0124689999999999999999999999
Q ss_pred ceEEEEEEEEeecC
Q psy5280 185 GTARQRVSSGNPAQ 198 (202)
Q Consensus 185 G~~~~~~~L~V~~~ 198 (202)
|...+.+.|.|..+
T Consensus 98 g~~~~~~~l~V~~~ 111 (122)
T 3s35_X 98 MTKKNSTFVRVHEK 111 (122)
T ss_dssp CEEEEEEEEEEEEE
T ss_pred CceEEEEEEEEecc
Confidence 99999999988754
No 144
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.48 E-value=1e-13 Score=106.78 Aligned_cols=126 Identities=13% Similarity=-0.061 Sum_probs=72.5
Q ss_pred eeeeecCCCCCeeeecCCCeecCCC---------CceeeeccccccCCCCC-CCC---------------------CCCe
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPD---------KSFYFPRDFDLERPPRE-GYA---------------------QAPR 105 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~---------~~~~~~~~~~ie~~~~~-~~~---------------------~~P~ 105 (202)
..|.+.+.+. .+.|+|+|..+... ...+.+..+..++.|.| |.+ .+|.
T Consensus 24 L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~ 102 (196)
T 2d3v_A 24 IRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPT 102 (196)
T ss_dssp EEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCE
T ss_pred EEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCe
Confidence 4476666655 88999999876321 12233344444454443 210 1344
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcE-EEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRY-DSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~-~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
+...+ .. .+.+|+++.|.|.+.|.| |.+.|+|++..+...... ...........|.|.++..+|+|.|+|.|.|..
T Consensus 103 i~~~~-~~-~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 179 (196)
T 2d3v_A 103 LSALP-SP-VVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRH 179 (196)
T ss_dssp EEC-------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETT
T ss_pred EEccC-Cc-cccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccC
Confidence 43322 23 678999999999999999 999999999887532211 110000123789999999999999999999987
Q ss_pred ce
Q psy5280 185 GT 186 (202)
Q Consensus 185 G~ 186 (202)
+.
T Consensus 180 ~~ 181 (196)
T 2d3v_A 180 IL 181 (196)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 145
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.47 E-value=1.3e-14 Score=119.70 Aligned_cols=141 Identities=16% Similarity=0.117 Sum_probs=72.7
Q ss_pred eeeeecCC-CCCeeeecCCCeecCCCCce------eeeccccccCCCCC-CCC---------------------------
Q psy5280 57 TQEKLNPE-RPKFEPYLPPGVPFHPDKSF------YFPRDFDLERPPRE-GYA--------------------------- 101 (202)
Q Consensus 57 ~~~~~~~~-~~~~~~w~~~g~~~~p~~~~------~~~~~~~ie~~~~~-~~~--------------------------- 101 (202)
..|.+.+. +.+.+.|+++|..+.....+ +.+..+..++.|.| |.+
T Consensus 28 l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~~~l~V~~~~~~~~~~~~~ 107 (334)
T 1ry7_B 28 LSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGE 107 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeCCeEEEEEEEEEeccCccccccccc
Confidence 45777766 45689999999887553221 22234444555544 211
Q ss_pred ----------CCCeEEeccC---CeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccC
Q psy5280 102 ----------QAPRFLNQEH---DTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKM 168 (202)
Q Consensus 102 ----------~~P~fi~~~~---~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~ 168 (202)
.+|.|+.... ....+.+|+.+.|.|.+.|.|.|.+.|+|++..+....++...........|.|.++
T Consensus 108 ~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 187 (334)
T 1ry7_B 108 DEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESV 187 (334)
T ss_dssp -----------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSC
T ss_pred cccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCC
Confidence 1344432211 123678899999999999999999999999998876543311111234568999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEeec
Q psy5280 169 LDRDVGMYEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
...|+|.|+|.|.|..|.....+.|.|..
T Consensus 188 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 216 (334)
T 1ry7_B 188 VPSDRGNYTCVVENKFGSIRQTYTLDVLE 216 (334)
T ss_dssp CGGGCCCEEEEEEETTEEEEEEEEEEEEC
T ss_pred CcccCEEEEEEEEeCCCCEEEEEEEEEec
Confidence 99999999999999999999888888865
No 146
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.47 E-value=3.1e-13 Score=104.00 Aligned_cols=79 Identities=16% Similarity=0.219 Sum_probs=65.6
Q ss_pred EecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE-EEEEE
Q psy5280 116 GIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ-RVSSG 194 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~-~~~L~ 194 (202)
+.+|+.+.|.|.+.|.| |.+.|++++..+..+.++.+. ..+..|.|.++..+|+|.|+|.|.|.+|...+ .+.|.
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~ 197 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLS---QNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLD 197 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEE---TTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEEC
T ss_pred EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEc---CCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeee
Confidence 67899999999999976 899999999999887777662 34478999999999999999999999998754 35666
Q ss_pred eecC
Q psy5280 195 NPAQ 198 (202)
Q Consensus 195 V~~~ 198 (202)
|.++
T Consensus 198 v~~~ 201 (208)
T 3r4d_A 198 IIFD 201 (208)
T ss_dssp CC--
T ss_pred EEeC
Confidence 6544
No 147
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.47 E-value=7.8e-14 Score=128.47 Aligned_cols=134 Identities=14% Similarity=0.102 Sum_probs=97.0
Q ss_pred eeeeecCCCC-CeeeecCCCeecCCCC-----------ceeeeccccccCCCCC-C----------------CCCCCeEE
Q psy5280 57 TQEKLNPERP-KFEPYLPPGVPFHPDK-----------SFYFPRDFDLERPPRE-G----------------YAQAPRFL 107 (202)
Q Consensus 57 ~~~~~~~~~~-~~~~w~~~g~~~~p~~-----------~~~~~~~~~ie~~~~~-~----------------~~~~P~fi 107 (202)
..|.+.+.++ ..+.|+++|.++..+. +.+....+..++.|.| | ...+|.|+
T Consensus 639 L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~ 718 (816)
T 3dmk_A 639 LHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWI 718 (816)
T ss_dssp EEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEE
T ss_pred EEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCcee
Confidence 3466665554 4899999998864321 1222344444555544 2 12478888
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcc-------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIE-------MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~-------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+.+. .+.+|+++.|.|.+.|.|.|.|+|+|++..+. .+.++.+ ..+.|.|.++..+|+|.|+|.|
T Consensus 719 ~~~~~~-~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a 792 (816)
T 3dmk_A 719 LEPTDK-AFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV-----EEGTLHVDNIQKTNEGYYLCEA 792 (816)
T ss_dssp ECCCCE-EEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEE-----ETTEEEECSCCGGGCEEEEEEE
T ss_pred eecccc-eecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEe-----cCCEEEECcCChhhCeEEEEEE
Confidence 777777 88999999999999999999999999875432 2233333 2357999999999999999999
Q ss_pred EeCCceEEEEEEEEee
Q psy5280 181 SNEHGTARQRVSSGNP 196 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~ 196 (202)
.|.+|++.+++.+...
T Consensus 793 ~N~~G~~~~~v~~~~~ 808 (816)
T 3dmk_A 793 INGIGSGLSAVIMISV 808 (816)
T ss_dssp ECSSSSCEEEEEEEEE
T ss_pred EeCCCCCcEEEEEEEe
Confidence 9999999888766544
No 148
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.47 E-value=6.2e-14 Score=110.82 Aligned_cols=81 Identities=12% Similarity=0.028 Sum_probs=61.1
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcE--EEE------------------EeeCCeEEEEEccCCCCCCE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRY--DSS------------------YTRNGQATLFINKMLDRDVG 174 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~--~i~------------------~~~~~~~~L~I~~~~~~D~G 174 (202)
.+.+|+++.|.|.+.|.|.|.++|+|++..+...... ... ........|.|.++..+|+|
T Consensus 147 ~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 226 (250)
T 2fbo_J 147 QVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAG 226 (250)
T ss_dssp ECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCE
T ss_pred EecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCE
Confidence 6667999999999999999999999999877542211 000 00012368999999999999
Q ss_pred EEEEEEEe---CCceEEEEEEEEe
Q psy5280 175 MYEALASN---EHGTARQRVSSGN 195 (202)
Q Consensus 175 ~Y~C~a~N---~~G~~~~~~~L~V 195 (202)
.|+|.|.| ..|....++.|.|
T Consensus 227 ~Y~C~a~N~~g~~g~~~~~~~l~V 250 (250)
T 2fbo_J 227 RVWCELATGQGELDADRSSTILKV 250 (250)
T ss_dssp EEEEEEESSSSGGGEEEEEEEEEC
T ss_pred EEEEEecCCccccCccceeEEEeC
Confidence 99999999 5556666666654
No 149
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.47 E-value=8e-14 Score=116.85 Aligned_cols=140 Identities=9% Similarity=-0.058 Sum_probs=98.3
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCceeeeccccccCCCCC-CCC---------CCCeEEe-cc--CCeeEEecCCeEE
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKSFYFPRDFDLERPPRE-GYA---------QAPRFLN-QE--HDTQYGIKNENSS 123 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~~~~~~~~~ie~~~~~-~~~---------~~P~fi~-~~--~~~~~v~~G~~v~ 123 (202)
..|.+.+.+.+.+.|+++|..+......+.+..+..++.|.| |.+ .....+. .+ .....+.+|+.+.
T Consensus 116 l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~~~~~~~G~~v~ 195 (363)
T 1wio_A 116 LTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVE 195 (363)
T ss_dssp EEEECCTTCCCCEEEECSSSCEEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSEEEEEEETBCCEE
T ss_pred EEEEcCCCCCCeEEEEcCCCcccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCCCceEEecCCEEE
Confidence 447777888889999999976544344444466666666655 211 0000010 01 0223678899999
Q ss_pred EEEEEEe-----ecCCceEEEeCCEEccc--------CCcEEEEEe---------eCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 124 LFWFVYG-----YPKPKVSFYFNDELIEM--------GGRYDSSYT---------RNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 124 L~C~v~G-----~P~P~i~W~k~g~~l~~--------~~r~~i~~~---------~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
|.|.+.| .|.|.++|+++|..+.. +.++.+... ......|.|.++..+|+|.|+|.|.
T Consensus 196 l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 275 (363)
T 1wio_A 196 FSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLA 275 (363)
T ss_dssp EECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEEC
T ss_pred EEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEE
Confidence 9998888 88999999999988765 444544221 1224589999999999999999999
Q ss_pred eC--CceEEEEEEEEee
Q psy5280 182 NE--HGTARQRVSSGNP 196 (202)
Q Consensus 182 N~--~G~~~~~~~L~V~ 196 (202)
|. .|..+..+.|.|.
T Consensus 276 n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 276 LEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp BTTTTCCEEEEEEEEEE
T ss_pred EhhhcCeEEEEEeEEEE
Confidence 99 9999999888876
No 150
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.47 E-value=2.3e-13 Score=122.11 Aligned_cols=133 Identities=13% Similarity=0.116 Sum_probs=99.5
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCceeeeccccccCCCCC-CCC---------------------CCCeEEeccCCee
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKSFYFPRDFDLERPPRE-GYA---------------------QAPRFLNQEHDTQ 114 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~~~~~~~~~ie~~~~~-~~~---------------------~~P~fi~~~~~~~ 114 (202)
..|.+.+.+.+.+.|+++|.++.....+.+ ..+..++.|.| |.+ .+|.+ ....+.
T Consensus 401 l~C~~~g~p~~~i~W~~~g~~~~~~~~L~i-~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i-~~~~~~- 477 (642)
T 1e07_A 401 LSCHAASNPPAQYSWLIDGNIQQHTQELFI-SNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSI-SSNNSK- 477 (642)
T ss_pred EEEEcCccCCCeEEEEECCEEcCCCceEEE-ccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceE-ecCCce-
Confidence 457788888899999999998766544443 55555555544 110 12332 223333
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE-EEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ-RVSS 193 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~-~~~L 193 (202)
.+.+|+.+.|.|.+.+ |.|.+.|+|++..+..+.++.+. .+++.|.|.++...|+|.|+|.|.|..|...+ .+.|
T Consensus 478 ~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l 553 (642)
T 1e07_A 478 PVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLS---NGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTL 553 (642)
T ss_pred eecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEc---CCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEE
Confidence 6779999999999995 88999999999999888877762 23578999999999999999999999997644 5777
Q ss_pred Eee
Q psy5280 194 GNP 196 (202)
Q Consensus 194 ~V~ 196 (202)
.|.
T Consensus 554 ~V~ 556 (642)
T 1e07_A 554 DVL 556 (642)
T ss_pred EEE
Confidence 775
No 151
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.46 E-value=3e-13 Score=112.16 Aligned_cols=138 Identities=10% Similarity=0.034 Sum_probs=94.4
Q ss_pred eeeeecCCC-CCeeeecCCCeecCCCCce-------eeeccccccCCCCC-CCC----------------------CCC-
Q psy5280 57 TQEKLNPER-PKFEPYLPPGVPFHPDKSF-------YFPRDFDLERPPRE-GYA----------------------QAP- 104 (202)
Q Consensus 57 ~~~~~~~~~-~~~~~w~~~g~~~~p~~~~-------~~~~~~~ie~~~~~-~~~----------------------~~P- 104 (202)
..|.+.+.+ .+.+.|+++|..+...... +.+..+..++.|.| |.+ .+|
T Consensus 148 L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~ 227 (329)
T 3oq3_B 148 LYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQD 227 (329)
T ss_dssp EECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCC
T ss_pred EEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCC
Confidence 347677888 7899999999987432211 22233333444433 110 122
Q ss_pred ---eEEeccCCeeEEecCCeEEEEEEEEeec---CC-ceEEEeCCEEc-ccCCcEEEEE-eeC--CeEEEEEccCCCCCC
Q psy5280 105 ---RFLNQEHDTQYGIKNENSSLFWFVYGYP---KP-KVSFYFNDELI-EMGGRYDSSY-TRN--GQATLFINKMLDRDV 173 (202)
Q Consensus 105 ---~fi~~~~~~~~v~~G~~v~L~C~v~G~P---~P-~i~W~k~g~~l-~~~~r~~i~~-~~~--~~~~L~I~~~~~~D~ 173 (202)
..+ .+... .+.+|+++.|.|.+.|.| .| .+.|++++..+ ..+.+..... ... ....|.|.++..+|+
T Consensus 228 ~~~~~~-~~~~~-~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 305 (329)
T 3oq3_B 228 HRFKLI-LDPKI-NVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYI 305 (329)
T ss_dssp CCEEEE-CCSEE-EECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGT
T ss_pred CCCcee-cCCee-EEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHC
Confidence 222 33444 788999999999999998 77 78999999875 3333322210 111 357899999999999
Q ss_pred E-EEEEEEEeCCceEEEEEEEEee
Q psy5280 174 G-MYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 174 G-~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
| .|+|.|.|..|....++.|.|.
T Consensus 306 G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 306 GNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp TCEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCcEEEEEEecCCceEEEEEEEeC
Confidence 9 9999999999999999988773
No 152
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.46 E-value=9.5e-13 Score=110.58 Aligned_cols=92 Identities=17% Similarity=0.251 Sum_probs=77.2
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CEEccc-----CCcEEEEEeeCCeEEEEEccCCCCCCEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DELIEM-----GGRYDSSYTRNGQATLFINKMLDRDVGM 175 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~l~~-----~~r~~i~~~~~~~~~L~I~~~~~~D~G~ 175 (202)
+|.|+. +.+. .+.+|+++.|.|.+.|.|.|.|+|+|+ |..+.. ..++.+.. ....+.|.|.++..+|+|.
T Consensus 1 ~P~i~~-~~~~-~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~ 77 (389)
T 2jll_A 1 QPHIIQ-LKNE-TTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG-QHGSSSLHIKDVKLSDSGR 77 (389)
T ss_dssp CCEEEE-CCCE-EEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEE-CSSEEEEEEESCCGGGCEE
T ss_pred CCeEEe-cCce-EEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEec-cCCcceEEEcccChhhCEE
Confidence 366665 5566 788999999999999999999999999 888865 45666632 2346799999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEeec
Q psy5280 176 YEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 176 Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
|+|.|.|..|..+..+.|.|..
T Consensus 78 Y~C~a~n~~g~~~~~~~l~V~~ 99 (389)
T 2jll_A 78 YDCEAASRIGGHQKSMYLDIEY 99 (389)
T ss_dssp EEEEEECSSCEEEEEEEEEEEE
T ss_pred EEEEEEeCCCCcceEEEEEEEe
Confidence 9999999999999888888763
No 153
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.46 E-value=4.4e-13 Score=109.10 Aligned_cols=136 Identities=15% Similarity=0.139 Sum_probs=96.4
Q ss_pred eeeeec-CCCCCeeeecCCCeecCCCCce----------eeeccccccCCCCC-CCC---------------C-------
Q psy5280 57 TQEKLN-PERPKFEPYLPPGVPFHPDKSF----------YFPRDFDLERPPRE-GYA---------------Q------- 102 (202)
Q Consensus 57 ~~~~~~-~~~~~~~~w~~~g~~~~p~~~~----------~~~~~~~ie~~~~~-~~~---------------~------- 102 (202)
+.|.+. +.+.+.+.|+|+|.++.....+ +.+..+..++.|.| |.+ .
T Consensus 21 l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~v~~~~~~~~~ 100 (312)
T 2y23_A 21 LNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLAL 100 (312)
T ss_dssp EEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEECHHHHHHHHHH
T ss_pred EEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEEEEeeeeeeecc
Confidence 445554 5677889999999987654222 22344445555554 211 0
Q ss_pred -----CCeEEeccCCeeEEecCCeEEEEEEEE-eecCCceEEEeCCEEcccCCcEEEEEee-CCeEEEEEccCCCCCCEE
Q psy5280 103 -----APRFLNQEHDTQYGIKNENSSLFWFVY-GYPKPKVSFYFNDELIEMGGRYDSSYTR-NGQATLFINKMLDRDVGM 175 (202)
Q Consensus 103 -----~P~fi~~~~~~~~v~~G~~v~L~C~v~-G~P~P~i~W~k~g~~l~~~~r~~i~~~~-~~~~~L~I~~~~~~D~G~ 175 (202)
+|.+.........+.+|+.+.|.|.+. |.|.|.++|++++..+..+.++.+.... .....|.|.++..+|+|.
T Consensus 101 ~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 180 (312)
T 2y23_A 101 SHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGT 180 (312)
T ss_dssp HHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEE
T ss_pred cccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEe
Confidence 455443332133788999999999999 8999999999999999988877764332 345679999999999999
Q ss_pred EEEEEEeCCceEEEEEE
Q psy5280 176 YEALASNEHGTARQRVS 192 (202)
Q Consensus 176 Y~C~a~N~~G~~~~~~~ 192 (202)
|+|.|.|..+.......
T Consensus 181 Y~C~~~~~~~~~~~~~~ 197 (312)
T 2y23_A 181 YTFQLQDGKATNHSTVV 197 (312)
T ss_dssp EEEEEESSSCEEEEEEE
T ss_pred EEEEEEeCCceEEEEEE
Confidence 99999987666555444
No 154
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=4e-13 Score=93.00 Aligned_cols=80 Identities=11% Similarity=0.098 Sum_probs=66.9
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSG 194 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~ 194 (202)
.+.+|+++.|.|.+. .|.|.+.|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|.| ...++.|.
T Consensus 22 ~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~a~~----~~~~~~l~ 95 (102)
T 2eo1_A 22 QAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEA-VGCTRRLVVQQAGQAEAGEYSCEAGG----QQLSFRLQ 95 (102)
T ss_dssp EEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEE-ETTEEEEEETTCCTTTCSCEEEEETT----EECCEEEE
T ss_pred EEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEE-cCCEEEEEECCCCcccCEEEEEEcCC----CcEEEEEE
Confidence 788999999999998 8999999999999998877877632 34457899999999999999999954 45567888
Q ss_pred eecCCC
Q psy5280 195 NPAQGS 200 (202)
Q Consensus 195 V~~~~~ 200 (202)
|..+.-
T Consensus 96 V~~p~~ 101 (102)
T 2eo1_A 96 VAGQCF 101 (102)
T ss_dssp EESCCC
T ss_pred EeCCCC
Confidence 876643
No 155
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.46 E-value=5e-14 Score=110.02 Aligned_cols=74 Identities=14% Similarity=0.131 Sum_probs=57.7
Q ss_pred ecCCeEEEEEEEEeecCCceEEEeCCEEcccCC-cEEEEEeeCCeEEEEEccC-CCCCCEEEEEEEEeCCceE-EEEEEE
Q psy5280 117 IKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG-RYDSSYTRNGQATLFINKM-LDRDVGMYEALASNEHGTA-RQRVSS 193 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~-r~~i~~~~~~~~~L~I~~~-~~~D~G~Y~C~a~N~~G~~-~~~~~L 193 (202)
.+|+++.|.|. |.|.|.++|+|++..+.... ...+. ...+.|.|.++ ..+|+|.|+|.|.|..|.. +....|
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~---~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l 200 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIG---SDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYL 200 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEE---EETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEE
T ss_pred ecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEe---cCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEE
Confidence 38999999998 89999999999999886532 11121 12568999999 9999999999999999963 444555
Q ss_pred Ee
Q psy5280 194 GN 195 (202)
Q Consensus 194 ~V 195 (202)
.+
T Consensus 201 ~~ 202 (204)
T 1sy6_A 201 RA 202 (204)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 156
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.46 E-value=1.2e-13 Score=114.29 Aligned_cols=148 Identities=9% Similarity=-0.008 Sum_probs=100.0
Q ss_pred CCeeeeccce----------eeeeec-------CCCCCeeeecCCCeec--CCC--------CceeeeccccccCCCCC-
Q psy5280 47 APRFLNQEHD----------TQEKLN-------PERPKFEPYLPPGVPF--HPD--------KSFYFPRDFDLERPPRE- 98 (202)
Q Consensus 47 ~p~f~~~~~~----------~~~~~~-------~~~~~~~~w~~~g~~~--~p~--------~~~~~~~~~~ie~~~~~- 98 (202)
.|.|...+.+ ..|.+. +.+.+.+.|+++|..+ ... ...+.+..+..++.|.|
T Consensus 18 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 97 (339)
T 3o4o_C 18 CRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYV 97 (339)
T ss_dssp CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEE
T ss_pred hHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEE
Confidence 5666655443 336666 7778889999999873 221 11122345555666654
Q ss_pred CCCC----------------CCeEE-eccCCeeEEecCCeEEEEEE-----EEeecCCceEEEeCCEEcccC-CcEEEEE
Q psy5280 99 GYAQ----------------APRFL-NQEHDTQYGIKNENSSLFWF-----VYGYPKPKVSFYFNDELIEMG-GRYDSSY 155 (202)
Q Consensus 99 ~~~~----------------~P~fi-~~~~~~~~v~~G~~v~L~C~-----v~G~P~P~i~W~k~g~~l~~~-~r~~i~~ 155 (202)
|.+. ++... ........+.+|+.+.|.|. +.|.|.|.+.|+|++..+... .++.+
T Consensus 98 C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~-- 175 (339)
T 3o4o_C 98 CTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLS-- 175 (339)
T ss_dssp CCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEE--
T ss_pred EEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEE--
Confidence 3210 11100 00111226788999999999 899999999999999988764 45554
Q ss_pred eeCCeEEEEEccCCCCCCEEEEEEEEeCCc----eEEEEEEEEeec
Q psy5280 156 TRNGQATLFINKMLDRDVGMYEALASNEHG----TARQRVSSGNPA 197 (202)
Q Consensus 156 ~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G----~~~~~~~L~V~~ 197 (202)
..+.+.|.|.++...|+|.|+|.|.|..| ..+..+.|.|..
T Consensus 176 -~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~ 220 (339)
T 3o4o_C 176 -VRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKK 220 (339)
T ss_dssp -CTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEEC
T ss_pred -cCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEc
Confidence 13345899999999999999999999998 567778888764
No 157
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.46 E-value=1.5e-13 Score=105.43 Aligned_cols=60 Identities=10% Similarity=0.099 Sum_probs=52.6
Q ss_pred ecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 117 IKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
.+|+++.|.|.+ |.|.|+|+|+|..+..... ....|.|.++..+|+|.|+|.|.|..|..
T Consensus 120 ~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~--------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 120 RGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA--------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSSCEEEEECSS---SCSCEEEEETTEECCCSSC--------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCCCeEEEEeeC---CCCeEEEEECCEECcccCC--------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 389999999988 8999999999999875432 35679999999999999999999999876
No 158
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.46 E-value=1.7e-13 Score=106.67 Aligned_cols=95 Identities=19% Similarity=0.219 Sum_probs=77.7
Q ss_pred CCCeEEecc----CCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEE
Q psy5280 102 QAPRFLNQE----HDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 102 ~~P~fi~~~----~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
.+|.|+..+ ... .+.+|+++.|.|.+.|.|.|.+.|++++..+....++...........|.|.++...|+|.|+
T Consensus 14 ~~P~~~~~~~~~~~~~-~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLH-AVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp EEEEESCGGGGCCSCE-EEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred cCCccccccccCceeE-EEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 478887665 455 889999999999999999999999999999876544321111234568999999999999999
Q ss_pred EEEEeCCceEEEEEEEEeec
Q psy5280 178 ALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 178 C~a~N~~G~~~~~~~L~V~~ 197 (202)
|.+.|..|.....+.|.|..
T Consensus 93 C~~~n~~~~~~~~~~l~V~~ 112 (231)
T 3ojm_B 93 CVVENEYGSINHTYHLDVVE 112 (231)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEecccCcccccEEEEEEc
Confidence 99999999998888888865
No 159
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.45 E-value=9.3e-14 Score=106.17 Aligned_cols=120 Identities=10% Similarity=-0.021 Sum_probs=80.4
Q ss_pred eeeeecCCCCCeeeecCCCeecCCCCceeeeccccccCCCCC-CC---------------------CCCCeEEeccCCee
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPDKSFYFPRDFDLERPPRE-GY---------------------AQAPRFLNQEHDTQ 114 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~~~~~~~~~~~ie~~~~~-~~---------------------~~~P~fi~~~~~~~ 114 (202)
..|...+ +.+.+.|+|+|.........+.+..+..++.|.| |. ..+|.+...+ +.
T Consensus 27 L~C~~~~-~~~~~~W~k~g~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~- 103 (184)
T 2gi7_A 27 LRCQGPP-GVDLYRLEKLSSSRYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQP-GP- 103 (184)
T ss_dssp EEEECST-TCSEEEEEETTTCCEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEEC-CC-
T ss_pred EEEeCCC-CCCEEEEEECCccccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCC-Cc-
Confidence 4466666 6678899999975222233333345555555543 20 1134444333 33
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
.+.+|+++.|.|.+.+.| +.+.|+|++..+....... .....|.|.++..+|+|.|+|.|.|..+
T Consensus 104 ~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 104 AVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPER-----WYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp SSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCE-----EEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred eecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCC-----CceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 567899999999987665 6999999998876532211 1246789999999999999999999865
No 160
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.45 E-value=9.9e-14 Score=114.17 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=94.0
Q ss_pred eeee-ecCCCCCeeeecCC--Ceec-----CCCCce-----eeeccccccCCCCC-CC----------------CCCCeE
Q psy5280 57 TQEK-LNPERPKFEPYLPP--GVPF-----HPDKSF-----YFPRDFDLERPPRE-GY----------------AQAPRF 106 (202)
Q Consensus 57 ~~~~-~~~~~~~~~~w~~~--g~~~-----~p~~~~-----~~~~~~~ie~~~~~-~~----------------~~~P~f 106 (202)
..|. ..+.+.+.+.|+++ +... ..+..+ +.......++.|.| |. ..+|.+
T Consensus 155 l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~ 234 (331)
T 3u83_A 155 ATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEV 234 (331)
T ss_dssp EEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEE
T ss_pred EEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeE
Confidence 4465 56778889999985 3221 112222 11222344555544 21 134555
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCc-eEEEeCCEEcccCCcEEEEEeeCCeEEEEEc-cCCCCCCEEEEEEEEeCC
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPK-VSFYFNDELIEMGGRYDSSYTRNGQATLFIN-KMLDRDVGMYEALASNEH 184 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~-i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~-~~~~~D~G~Y~C~a~N~~ 184 (202)
.........+.+|+++.|.|.+.|.|.|. +.|++++..+.... .+ ....|.|. ++..+|+|.|+|.|.|..
T Consensus 235 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~--~~-----~~~~L~i~~~v~~~d~G~Y~C~a~N~~ 307 (331)
T 3u83_A 235 TIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV--EA-----QNRTLFFKGPINYSLAGTYICEATNPI 307 (331)
T ss_dssp EEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--EE-----ETTEEEECSCCCGGGCEEEEEEEEETT
T ss_pred EEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc--ee-----cCcEEEEeCCCccccCeEEEEEEEecc
Confidence 43333332678899999999999999998 99999998876542 22 23579999 899999999999999999
Q ss_pred ceEEEEEEEEeecCC
Q psy5280 185 GTARQRVSSGNPAQG 199 (202)
Q Consensus 185 G~~~~~~~L~V~~~~ 199 (202)
|..+..+.|.|....
T Consensus 308 G~~~~~~~l~V~~~~ 322 (331)
T 3u83_A 308 GTRSGQVEVNITEAA 322 (331)
T ss_dssp EEEEEEEEECCBC--
T ss_pred ccceEEEEEEEeccc
Confidence 999999999988653
No 161
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.45 E-value=7e-15 Score=112.96 Aligned_cols=131 Identities=11% Similarity=0.027 Sum_probs=90.0
Q ss_pred eeeeecCCCCCeeeecCCCeec----------CC--CC------ceeeeccccccCCCCC-CC-----------------
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPF----------HP--DK------SFYFPRDFDLERPPRE-GY----------------- 100 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~----------~p--~~------~~~~~~~~~ie~~~~~-~~----------------- 100 (202)
..|.+.+.+.+.+.|++++..+ .. .. ..+....+..++.|.| |.
T Consensus 24 L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~ 103 (209)
T 1nbq_A 24 LSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLI 103 (209)
T ss_dssp EECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECC
T ss_pred EEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEE
Confidence 5587888888899999988652 00 00 1122244445555543 21
Q ss_pred -CCCCeEEeccCCeeEEecCCeEEEEEEE-EeecCCceEEEeCCEEcccCCc---------EEEEEeeCCeEEEEEccCC
Q psy5280 101 -AQAPRFLNQEHDTQYGIKNENSSLFWFV-YGYPKPKVSFYFNDELIEMGGR---------YDSSYTRNGQATLFINKML 169 (202)
Q Consensus 101 -~~~P~fi~~~~~~~~v~~G~~v~L~C~v-~G~P~P~i~W~k~g~~l~~~~r---------~~i~~~~~~~~~L~I~~~~ 169 (202)
..+|.+....... .+.+|+.+.|.|.+ .|.|.|.+.|++++..+..... +.+ ......|.|.++.
T Consensus 104 V~~~p~~~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~L~i~~~~ 179 (209)
T 1nbq_A 104 VLVPPSKPTVNIPS-SATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVL---NPTTGELVFDPLS 179 (209)
T ss_dssp EEBCCCCCCCCCBS-EEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCC---CTTTCCEEESSCC
T ss_pred EecCCcCCCccccc-ceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEE---cCCcceEEEEecc
Confidence 1234443333344 67899999999997 9999999999999988875432 222 1245689999999
Q ss_pred CCCCEEEEEEEEeCCceEEEEE
Q psy5280 170 DRDVGMYEALASNEHGTARQRV 191 (202)
Q Consensus 170 ~~D~G~Y~C~a~N~~G~~~~~~ 191 (202)
.+|+|.|+|.|.|..|....+.
T Consensus 180 ~~d~G~Y~C~a~n~~g~~~~s~ 201 (209)
T 1nbq_A 180 ASDTGEYSCEARNGYGTPMTSN 201 (209)
T ss_dssp GGGCCCEEEEEECSSSCCEECC
T ss_pred ccCCeEEEEEEeCCcCcccccc
Confidence 9999999999999999984443
No 162
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.45 E-value=4e-13 Score=108.41 Aligned_cols=134 Identities=14% Similarity=0.078 Sum_probs=90.2
Q ss_pred eeeeecCCCCCeeeecC-CCeecCCCCc----------eeeeccccccCCCCC-CC-----------------CCCCeEE
Q psy5280 57 TQEKLNPERPKFEPYLP-PGVPFHPDKS----------FYFPRDFDLERPPRE-GY-----------------AQAPRFL 107 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~-~g~~~~p~~~----------~~~~~~~~ie~~~~~-~~-----------------~~~P~fi 107 (202)
..|.+.+.+. .+.|++ +|..+..... .+.+..+..++.|.| |. ..+|.|.
T Consensus 24 l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~ 102 (291)
T 2wim_A 24 FTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFR 102 (291)
T ss_dssp EEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCC
T ss_pred EEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceE
Confidence 4477777665 789999 7876554321 122344444555544 21 1244554
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc--CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM--GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~--~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
..+... .+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+ .....|.|.++...|+|.|+|.|.|..+
T Consensus 103 ~~~~~~-~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~~~n~~~ 177 (291)
T 2wim_A 103 EVVSPQ-EFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAM----LANNNLQILNINKSDEGIYRCEGRVEAR 177 (291)
T ss_dssp SCCCSE-EEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEE----CTTSCEEETTCCGGGCEEEEEEEEETTT
T ss_pred eCCCCh-hhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEE----ccCCCEEEEecchhhCEEEEEEEEECCC
Confidence 445555 788999999999999999999999999988764 445555 4456799999999999999999999986
Q ss_pred eEE--EEEEEEee
Q psy5280 186 TAR--QRVSSGNP 196 (202)
Q Consensus 186 ~~~--~~~~L~V~ 196 (202)
... ..+.|.|.
T Consensus 178 ~~~~~~~~~~~v~ 190 (291)
T 2wim_A 178 GEIDFRDIIVIVN 190 (291)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CeeEEeeEEEEec
Confidence 533 33445544
No 163
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.44 E-value=1.7e-12 Score=113.74 Aligned_cols=140 Identities=12% Similarity=0.044 Sum_probs=100.7
Q ss_pred eeeeecCCCCCeeeecC-CCeecCCC--------CceeeeccccccCCC-CC-C---------------------CCCCC
Q psy5280 57 TQEKLNPERPKFEPYLP-PGVPFHPD--------KSFYFPRDFDLERPP-RE-G---------------------YAQAP 104 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~-~g~~~~p~--------~~~~~~~~~~ie~~~-~~-~---------------------~~~~P 104 (202)
..|.+.+.+.+.+.|++ +|..+... .++.+ ..+..++.| .| | ...+|
T Consensus 134 l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i-~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p 212 (524)
T 2ec8_A 134 VRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMI-KSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVP 212 (524)
T ss_dssp ECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEE-ESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCC
T ss_pred EECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEE-eccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCC
Confidence 44777776667899987 88876542 22222 444445555 33 1 02567
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCc-eEEEeCCEEc--ccCCcEEEEE--eeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPK-VSFYFNDELI--EMGGRYDSSY--TRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~-i~W~k~g~~l--~~~~r~~i~~--~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.|...+.+. .+.+|+++.|.|.+.|.|.|. +.|++++..+ ....+..+.. .....+.|.|.++..+|+|.|+|.
T Consensus 213 ~i~~~~~~~-~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 291 (524)
T 2ec8_A 213 VVSVSKASY-LLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCY 291 (524)
T ss_dssp EEECSCSEE-EEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEE
T ss_pred cEEecCCcc-eEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEE
Confidence 777777766 889999999999999999998 9999999873 3332222210 012257899999999999999999
Q ss_pred EEeCCceEEEEEEEEeecC
Q psy5280 180 ASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|..|.....+.|.|..+
T Consensus 292 a~n~~g~~~~~~~l~V~~~ 310 (524)
T 2ec8_A 292 ANNTFGSANVTTTLEVVDK 310 (524)
T ss_dssp EECSSCEEEEEEEEEEESS
T ss_pred EEecCCceEEEEEEEEecc
Confidence 9999999998988888643
No 164
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.43 E-value=1.1e-12 Score=110.53 Aligned_cols=79 Identities=24% Similarity=0.290 Sum_probs=68.5
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSG 194 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~ 194 (202)
.+.+|+.+.|.|.+.|.|.|.++|+|++..+........ .....|.|.++..+|+|.|+|.|.|..|..+..+.|.
T Consensus 233 ~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 308 (404)
T 3p3y_A 233 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFE----NFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVR 308 (404)
T ss_dssp EEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEE----GGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred eEecCCCEEEEEEECCCCCCcEEEEECCEECCCCccccc----ccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEE
Confidence 678999999999999999999999999998876554222 3457899999999999999999999999998888888
Q ss_pred eec
Q psy5280 195 NPA 197 (202)
Q Consensus 195 V~~ 197 (202)
|..
T Consensus 309 V~~ 311 (404)
T 3p3y_A 309 VKA 311 (404)
T ss_dssp EEE
T ss_pred EeC
Confidence 763
No 165
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.42 E-value=3.8e-12 Score=96.56 Aligned_cols=94 Identities=16% Similarity=0.142 Sum_probs=77.1
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeec-CCceEEEe-CCEEcc-cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYP-KPKVSFYF-NDELIE-MGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P-~P~i~W~k-~g~~l~-~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
++.|...+.+. .+.+|+++.|.|.+.|.| .+.+.|++ ++..+. ...++.+.........|.|.++...|+|.|+|.
T Consensus 2 p~~v~~~p~~~-~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (191)
T 1epf_A 2 VLQVDIVPSQG-EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (191)
T ss_dssp -CCEEEESSSE-EEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred ceEEEecCCCc-EEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEE
Confidence 45677777777 899999999999999987 88999999 888877 456666644446678999999999999999999
Q ss_pred EEeCC-ceEEEEEEEEeec
Q psy5280 180 ASNEH-GTARQRVSSGNPA 197 (202)
Q Consensus 180 a~N~~-G~~~~~~~L~V~~ 197 (202)
+.|.. +..+..+.|.|..
T Consensus 81 ~~~~~~~~~~~~~~l~v~~ 99 (191)
T 1epf_A 81 VTAEDGTQSEATVNVKIFQ 99 (191)
T ss_dssp EEETTTEEEEEEEEEEEEC
T ss_pred EEcCCCcceEEEEEEEeec
Confidence 99998 5666777777654
No 166
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.41 E-value=1.2e-12 Score=105.90 Aligned_cols=96 Identities=11% Similarity=0.036 Sum_probs=73.6
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEe----eCCeEEEEEccCCCCCCEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYT----RNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~----~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
+|.+...+.+. .+.+|+++.|.|.+.|.|.|.+.|+++++............. ......|.|.++..+|+|.|+|
T Consensus 181 ~p~i~~~~~~~-~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 259 (289)
T 3mjg_X 181 SINVSVNAVQT-VVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTC 259 (289)
T ss_dssp CCCCEEEESCS-EEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEE
T ss_pred CCCcEEeCCcc-eeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEE
Confidence 55555555565 789999999999999999999999987765433221111110 0124689999999999999999
Q ss_pred EEEeCCceEEEEEEEEeecCC
Q psy5280 179 LASNEHGTARQRVSSGNPAQG 199 (202)
Q Consensus 179 ~a~N~~G~~~~~~~L~V~~~~ 199 (202)
.|.|..|...+++.|.|....
T Consensus 260 ~a~N~~G~~~~~~~l~v~~~~ 280 (289)
T 3mjg_X 260 NVTESVNDHQDEKAINITVVE 280 (289)
T ss_dssp EEEETTTTEEEEEEEEEEEEC
T ss_pred EeecCCCCceeEEEEEEEEEe
Confidence 999999999999999987543
No 167
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.41 E-value=2.6e-13 Score=106.46 Aligned_cols=84 Identities=14% Similarity=-0.018 Sum_probs=58.1
Q ss_pred EEecCCeEEEEEEEEe-ecCCceEEEeCCEEcccCCcEEEEEeeCC-eEEEEEccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYG-YPKPKVSFYFNDELIEMGGRYDSSYTRNG-QATLFINKMLDRDVGMYEALASNEHGTARQRVS 192 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G-~P~P~i~W~k~g~~l~~~~r~~i~~~~~~-~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 192 (202)
.+.+|+.+.|.|.+.| .|.|.|+|+|++..+.......+.....+ ...+.+..+..+|+|.|+|.|.|.+|....++.
T Consensus 129 ~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~ 208 (226)
T 4f80_A 129 KGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTAS 208 (226)
T ss_dssp EEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEE
T ss_pred eeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEE
Confidence 6788999999999998 59999999997544433222212111121 123445567889999999999999999999999
Q ss_pred EEeecC
Q psy5280 193 SGNPAQ 198 (202)
Q Consensus 193 L~V~~~ 198 (202)
|.|.++
T Consensus 209 v~v~ep 214 (226)
T 4f80_A 209 ISIADP 214 (226)
T ss_dssp ECCCTT
T ss_pred EEECCC
Confidence 998765
No 168
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.41 E-value=5.1e-13 Score=105.35 Aligned_cols=133 Identities=11% Similarity=0.001 Sum_probs=87.5
Q ss_pred eeeeecCCCCCeeeecCCCeecCC---------CCc--eeeeccccccCCCCC-CC---------------------CCC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHP---------DKS--FYFPRDFDLERPPRE-GY---------------------AQA 103 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p---------~~~--~~~~~~~~ie~~~~~-~~---------------------~~~ 103 (202)
..|.+.+ +.+.+.|+|+|..+.. +.. .+.+..+..++.|.| |. ..+
T Consensus 28 L~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~ 106 (218)
T 1uct_A 28 IQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGK 106 (218)
T ss_dssp EEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCC
T ss_pred EEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccC
Confidence 4465555 5667899999976421 112 333344455555543 21 013
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
|.+...+ +. .+.+|+++.|.|.+.+.|.|.+.|+|+|..+... .. .......|.|.++..+|+|.|+|.|.|.
T Consensus 107 P~i~~~p-~~-~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~-~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 179 (218)
T 1uct_A 107 PFLSADR-GL-VLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ-HQ----SGEHPANFSLGPVDLNVSGIYRCYGWYN 179 (218)
T ss_dssp CEEEESS-CS-EECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS-EE----ECSSSEEEECCSCCGGGCEEEEEEEECT
T ss_pred CEEEeCC-CC-ccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc-cc----CCCccCEEEEccCCcccCEEEEEEEEcC
Confidence 4444333 44 7789999999998788888999999999876542 11 1245688999999999999999999986
Q ss_pred Cc-----eEEEEEEEEeec
Q psy5280 184 HG-----TARQRVSSGNPA 197 (202)
Q Consensus 184 ~G-----~~~~~~~L~V~~ 197 (202)
.. ..+..+.|.|..
T Consensus 180 ~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 180 RSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp TSTTEECCCCCCEEEEEC-
T ss_pred CCCCcCCCCCCcEEEEEec
Confidence 42 223446666654
No 169
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.41 E-value=1.4e-12 Score=98.73 Aligned_cols=91 Identities=20% Similarity=0.319 Sum_probs=75.6
Q ss_pred CCeEEeccCC-eeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 103 APRFLNQEHD-TQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 103 ~P~fi~~~~~-~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
+|.|...... ...+.+|+++.|.|.+.|.|.|.+.|++++..+....++.+ ......|.|.++...|+|.|+|.+.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~ 78 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL---KGSNTELTVRNIINSDGGPYVCRAT 78 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEE---ETTTTEEEECSCCGGGCEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEE---eCCeeEEEEecCChhcCcEEEEEEE
Confidence 5666544332 22677899999999999999999999999999988877765 2445689999999999999999999
Q ss_pred eCCceEEEEEEEEee
Q psy5280 182 NEHGTARQRVSSGNP 196 (202)
Q Consensus 182 N~~G~~~~~~~L~V~ 196 (202)
|..|.....+.|.|.
T Consensus 79 ~~~~~~~~~~~l~V~ 93 (192)
T 2va4_A 79 NKAGEDEKQAFLQVF 93 (192)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ccccccceEEEEEEE
Confidence 999998888777764
No 170
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.41 E-value=2.3e-12 Score=95.06 Aligned_cols=91 Identities=9% Similarity=-0.043 Sum_probs=73.3
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEE---------eCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFY---------FNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMY 176 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~---------k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y 176 (202)
|...+.+. .+.+|+++.|.|.+.+.|.+.+.|+ +++..+ ...++.+.........|.|.++..+|+|.|
T Consensus 41 ~~~~p~~~-~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~-~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y 118 (145)
T 1z9m_A 41 SQPWTSDE-TVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRAL-RDNRIQLVTSTPHELSISISNVALADEGEY 118 (145)
T ss_dssp TCCBCCCE-EEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECS-CCTTEEEEEECSSEEEEEECSCCGGGCEEE
T ss_pred eecCCceE-EEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceec-ccCCEEEecCCCCeEEEEECCCChhhCEEE
Confidence 34445555 8999999999999999999999999 444433 345666544444567899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEeecCC
Q psy5280 177 EALASNEHGTARQRVSSGNPAQG 199 (202)
Q Consensus 177 ~C~a~N~~G~~~~~~~L~V~~~~ 199 (202)
+|.+.|. |.....+.|.|..+.
T Consensus 119 ~C~~~n~-~~~~~~~~L~V~~~P 140 (145)
T 1z9m_A 119 TCSIFTM-PVRTAKSLVTVLGIP 140 (145)
T ss_dssp EEEECSS-SCEEEEEEEEEECCC
T ss_pred EEEEEcC-CCceEEEEEEEEeCC
Confidence 9999999 999999999987653
No 171
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.41 E-value=1.1e-13 Score=114.98 Aligned_cols=136 Identities=10% Similarity=-0.036 Sum_probs=65.4
Q ss_pred cCCCCCeeeecCCCeecCCCC------ceeeeccccccCCCCC-CC------C--------------------CCCeEEe
Q psy5280 62 NPERPKFEPYLPPGVPFHPDK------SFYFPRDFDLERPPRE-GY------A--------------------QAPRFLN 108 (202)
Q Consensus 62 ~~~~~~~~~w~~~g~~~~p~~------~~~~~~~~~ie~~~~~-~~------~--------------------~~P~fi~ 108 (202)
.+.+.+.+.|+|+|.++.... ..+.+..+..++.|.| |. + .+|.++.
T Consensus 150 ~g~p~~~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~ 229 (349)
T 4dep_C 150 PSSVKPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHS 229 (349)
T ss_dssp CTTSCCEEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC-
T ss_pred cCCCCceEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEec
Confidence 557888999999999875432 1122234444444443 20 0 1566655
Q ss_pred ccCCee-EEecCCeEEEEEEEE----eecCCceEEEeCCEEccc-CCcEEEEEe----e-C---CeEEEEEccCCCCCC-
Q psy5280 109 QEHDTQ-YGIKNENSSLFWFVY----GYPKPKVSFYFNDELIEM-GGRYDSSYT----R-N---GQATLFINKMLDRDV- 173 (202)
Q Consensus 109 ~~~~~~-~v~~G~~v~L~C~v~----G~P~P~i~W~k~g~~l~~-~~r~~i~~~----~-~---~~~~L~I~~~~~~D~- 173 (202)
...+.. .+.+|+++.|.|.+. |.|.|.+.|++++..+.. ..++.+... . . ....|.|.++..+|+
T Consensus 230 ~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~ 309 (349)
T 4dep_C 230 PNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLK 309 (349)
T ss_dssp ---------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-----------
T ss_pred CCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcC
Confidence 443322 677899999999999 568999999999988765 232222000 0 1 134599999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEeec
Q psy5280 174 GMYEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 174 G~Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
|.|+|.|.|..|...+.+.|.|..
T Consensus 310 G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 310 RSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp --CEEEEECSSCEEEEECC-----
T ss_pred CcEEEEEEcCCCcEEEEEEEeeec
Confidence 999999999999999999888865
No 172
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.40 E-value=2.2e-12 Score=114.27 Aligned_cols=88 Identities=11% Similarity=0.011 Sum_probs=67.5
Q ss_pred cCCeeEEecCCeEEEEEEEE----eecCCceEEEeCCEEcccCCc------EEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVY----GYPKPKVSFYFNDELIEMGGR------YDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~----G~P~P~i~W~k~g~~l~~~~r------~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
+.+. .+.+|+++.|.|.+. |.|.|.|.|+|+|..+..... +.........+.|.|.++..+|+|.|+|.
T Consensus 449 ~~~~-~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 527 (585)
T 2ocw_A 449 PGNV-TAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCG 527 (585)
T ss_pred CCce-eEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEE
Confidence 4455 788999999999997 788899999999988754321 11111112346899999999999999999
Q ss_pred EEeCCceEEEE-EEEEeecC
Q psy5280 180 ASNEHGTARQR-VSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~~~~~-~~L~V~~~ 198 (202)
|.|..|..... +.|.|..+
T Consensus 528 a~N~~G~~~~~~~~l~V~~~ 547 (585)
T 2ocw_A 528 VKQGHFYGETAAVYVAVEER 547 (585)
T ss_pred eEeCCCccEEEEEEEEEEee
Confidence 99999976544 78888764
No 173
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.40 E-value=8.5e-13 Score=108.53 Aligned_cols=149 Identities=10% Similarity=-0.043 Sum_probs=87.5
Q ss_pred CcccCCCCCCCccCCeeeeccce---------eeeeecCCCCCeeeecCCCeecCCC------CceeeeccccccCCCCC
Q psy5280 34 FDLERPPREGYAQAPRFLNQEHD---------TQEKLNPERPKFEPYLPPGVPFHPD------KSFYFPRDFDLERPPRE 98 (202)
Q Consensus 34 ~~~~r~~~~~~~~~p~f~~~~~~---------~~~~~~~~~~~~~~w~~~g~~~~p~------~~~~~~~~~~ie~~~~~ 98 (202)
++.+--.+.+...+|.|...+.. ..|.+.+. .+.+.|+|+|..+.+. ...+.+..+..++.|.|
T Consensus 11 ~~~~~~~~~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (316)
T 3vh8_G 11 DDDDKGSHMGGQDKPFLSAWPSAVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNY 89 (316)
T ss_dssp -------------CCEEEEESCSEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEE
T ss_pred CCcccccccCCCCCCEeeccCCCccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEE
Confidence 33444455555567777755442 33766666 5677899999876541 22233344445555543
Q ss_pred -CC------------------------CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEE
Q psy5280 99 -GY------------------------AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDS 153 (202)
Q Consensus 99 -~~------------------------~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i 153 (202)
|. ..+|.+...+. . .+.+|+++.|.|.+. .+.+.+.|+|++..+........
T Consensus 90 ~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~-~-~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~ 166 (316)
T 3vh8_G 90 TCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPG-P-LVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQ 166 (316)
T ss_dssp EEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESC-S-EEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECE
T ss_pred EEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCC-C-ccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeee
Confidence 21 01234433332 3 478999999999994 56678999999987753221111
Q ss_pred EEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 154 SYTRNGQATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 154 ~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
.........|.|.++..+|+|.|+|.|.|..|.
T Consensus 167 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 167 IHDGVSKANFSIGPMMLALAGTYRCYGSVTHTP 199 (316)
T ss_dssp EETTEEEEEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred ecCCCceEEEEECCCChhhCceEEEEEecCCCC
Confidence 111113568999999999999999999999884
No 174
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.40 E-value=1.1e-12 Score=102.71 Aligned_cols=87 Identities=21% Similarity=0.304 Sum_probs=67.4
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEE-eecCCceEEEeCCEEcccCCcEEEEEee-CCeEEEEEccCCCCCCEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVY-GYPKPKVSFYFNDELIEMGGRYDSSYTR-NGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~-G~P~P~i~W~k~g~~l~~~~r~~i~~~~-~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.|.|+... +. .+.+|+.+.|.|.+. +.|.|.|+|+|||..|..+.++.+.... .+...|.|.++..+|+|.|+|.|
T Consensus 3 ~p~~~~~~-~~-~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a 80 (207)
T 3rbs_A 3 DPFTKSEL-AV-EILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 80 (207)
T ss_dssp ---CCEEE-EE-EECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEE
T ss_pred CCeeecCC-ce-EEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEE
Confidence 56776655 44 889999999999996 4799999999999999888887774432 24568999999999999999999
Q ss_pred EeCCceEEEEEEE
Q psy5280 181 SNEHGTARQRVSS 193 (202)
Q Consensus 181 ~N~~G~~~~~~~L 193 (202)
.| |.+...+.+
T Consensus 81 ~N--g~a~~~~~~ 91 (207)
T 3rbs_A 81 QD--GKATNHSTV 91 (207)
T ss_dssp EE--TTEEEEEEE
T ss_pred EC--CCeEEEEEE
Confidence 99 444444443
No 175
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.39 E-value=1.9e-13 Score=113.31 Aligned_cols=128 Identities=11% Similarity=0.116 Sum_probs=87.0
Q ss_pred CCCeeeecCCCeecCCC-----CceeeeccccccCCC-CC-CCC-----------------CCCeEEeccCCeeEEecCC
Q psy5280 65 RPKFEPYLPPGVPFHPD-----KSFYFPRDFDLERPP-RE-GYA-----------------QAPRFLNQEHDTQYGIKNE 120 (202)
Q Consensus 65 ~~~~~~w~~~g~~~~p~-----~~~~~~~~~~ie~~~-~~-~~~-----------------~~P~fi~~~~~~~~v~~G~ 120 (202)
+.+.+.|+|+|..+... ...+.+..+..++.| .| |.+ .+|.++...... .+.+|+
T Consensus 66 p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~-~~~~G~ 144 (329)
T 3oq3_B 66 KDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYEL-GTHDKY 144 (329)
T ss_dssp TTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEET-TSSTTT
T ss_pred CCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccce-EEeCCC
Confidence 44689999999765332 122233555666666 44 311 233333222222 346699
Q ss_pred eEEEEEEEEeec-CCceEEEeCCEEccc-CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC--CceEEEE----EE
Q psy5280 121 NSSLFWFVYGYP-KPKVSFYFNDELIEM-GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNE--HGTARQR----VS 192 (202)
Q Consensus 121 ~v~L~C~v~G~P-~P~i~W~k~g~~l~~-~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~--~G~~~~~----~~ 192 (202)
.+.|.|.+.|.| .|.+.|+|++..+.. ..++.. . ...|.|.++..+|+|.|+|.|.|. .|..... +.
T Consensus 145 ~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~----~-~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~ 219 (329)
T 3oq3_B 145 GIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQ----S-GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKI 219 (329)
T ss_dssp CEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEE----E-TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEE
T ss_pred cEEEEeccCCCCCCceEEEEECCccCCCCCceEec----C-CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEE
Confidence 999999999999 999999999999863 445544 2 478999999999999999999997 6544333 66
Q ss_pred EEeecC
Q psy5280 193 SGNPAQ 198 (202)
Q Consensus 193 L~V~~~ 198 (202)
|.|..+
T Consensus 220 l~V~~~ 225 (329)
T 3oq3_B 220 LTVIPS 225 (329)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 777543
No 176
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.39 E-value=9.3e-13 Score=103.58 Aligned_cols=96 Identities=20% Similarity=0.223 Sum_probs=75.9
Q ss_pred CCCeEEeccC---CeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 102 QAPRFLNQEH---DTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 102 ~~P~fi~~~~---~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
.+|.|+..+. ....+.+|+++.|.|.+.|.|.|.+.|++++..+....++...........|.|.++...|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 3777775532 2348889999999999999999999999999998764432111112345689999999999999999
Q ss_pred EEEeCCceEEEEEEEEeec
Q psy5280 179 LASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 179 ~a~N~~G~~~~~~~L~V~~ 197 (202)
.+.|..|.....+.|.|..
T Consensus 90 ~~~~~~~~~~~~~~l~V~~ 108 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLE 108 (241)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEeecCCceEEEEEEEEec
Confidence 9999999998888888864
No 177
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.39 E-value=4.3e-13 Score=107.65 Aligned_cols=121 Identities=13% Similarity=0.099 Sum_probs=84.1
Q ss_pred eeecCCCCCeeeecCCCeecCCC--CceeeeccccccCCC-CCCCC--------------------CCCeEEec--cCCe
Q psy5280 59 EKLNPERPKFEPYLPPGVPFHPD--KSFYFPRDFDLERPP-REGYA--------------------QAPRFLNQ--EHDT 113 (202)
Q Consensus 59 ~~~~~~~~~~~~w~~~g~~~~p~--~~~~~~~~~~ie~~~-~~~~~--------------------~~P~fi~~--~~~~ 113 (202)
|.+. +.+.+.| +|.++... ...+..+....+++| +.|.+ .+|.+... +.+.
T Consensus 120 C~~~--p~~~i~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~ 195 (265)
T 2oz4_A 120 CEAH--PRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNW 195 (265)
T ss_dssp EECC--TTSEEEE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEE
T ss_pred EEcc--CCCEEEE--CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCcc
Confidence 4444 7788999 88887432 222334556666666 33321 12333221 2233
Q ss_pred eEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy5280 114 QYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSS 193 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L 193 (202)
.+.+|+.+.|.|.+.|.|.|.+.|+|++..+... +.+. .+..+|+|.|+|.|.|..|..+..+.|
T Consensus 196 -~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~------------g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l 260 (265)
T 2oz4_A 196 -TWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPI------------GESV--TVTRDLEGTYLCRARSTQGEVTREVTV 260 (265)
T ss_dssp -EEETTCEECCCCCCEEESCCEEEEEETTTEECCT------------TSCE--ECCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred -EEcCCCeEEEEeECccCCCCeEEEEECCcccCCC------------CcEE--EeehhhCeEEEEEEECCCCcEEEEEEE
Confidence 7889999999999999999999999998722211 1222 377799999999999999999999999
Q ss_pred EeecC
Q psy5280 194 GNPAQ 198 (202)
Q Consensus 194 ~V~~~ 198 (202)
.|..+
T Consensus 261 ~V~~p 265 (265)
T 2oz4_A 261 NVLSP 265 (265)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 99753
No 178
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.39 E-value=6.5e-13 Score=115.62 Aligned_cols=89 Identities=16% Similarity=0.192 Sum_probs=71.6
Q ss_pred CCeEEecc-CCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc---CCcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 103 APRFLNQE-HDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM---GGRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 103 ~P~fi~~~-~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~---~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
+|.++... .+. .+.+|+++.|.|.+.|.|.|.++|+|++..+.. ..++.+ ...++|.|.++..+|+|.|+|
T Consensus 384 ~P~i~~~~~~~~-~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C 458 (477)
T 2id5_A 384 RARIRDRKAQQV-FVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTV----FPDGTLEVRYAQVQDNGTYLC 458 (477)
T ss_dssp EEEESCCSCEEE-EEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEE----CTTSCEEESSCCSTTCEEEEE
T ss_pred cccccccccccE-EEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEe----CCCCEEEEeeCChHHCEEEEE
Confidence 34444333 444 889999999999999999999999999977753 334444 345679999999999999999
Q ss_pred EEEeCCceEEEEEEEEee
Q psy5280 179 LASNEHGTARQRVSSGNP 196 (202)
Q Consensus 179 ~a~N~~G~~~~~~~L~V~ 196 (202)
.|.|..|..++.+.|.|.
T Consensus 459 ~a~N~~g~~~~~~~l~V~ 476 (477)
T 2id5_A 459 IAANAGGNDSMPAHLHVR 476 (477)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCcEEEEEEEEEe
Confidence 999999999999999886
No 179
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.38 E-value=4.5e-12 Score=98.52 Aligned_cols=84 Identities=12% Similarity=-0.021 Sum_probs=62.2
Q ss_pred EEecCCeEEEEEEE-EeecCCceEEEe-CCEEcccCCcEEEEEeeC-CeEEEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy5280 115 YGIKNENSSLFWFV-YGYPKPKVSFYF-NDELIEMGGRYDSSYTRN-GQATLFINKMLDRDVGMYEALASNEHGTARQRV 191 (202)
Q Consensus 115 ~v~~G~~v~L~C~v-~G~P~P~i~W~k-~g~~l~~~~r~~i~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~ 191 (202)
.+.+|+.+.|.|.+ .|.|.|.+.|++ ++..+............. ....|.|.++..+|.|.|+|.|.|..|....++
T Consensus 121 ~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 200 (222)
T 4i0k_A 121 DLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHG 200 (222)
T ss_dssp ---CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEE
T ss_pred eecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEE
Confidence 56789999999999 899999999999 555554322222211111 123588999999999999999999999999999
Q ss_pred EEEeecC
Q psy5280 192 SSGNPAQ 198 (202)
Q Consensus 192 ~L~V~~~ 198 (202)
.|.|..+
T Consensus 201 ~l~V~~~ 207 (222)
T 4i0k_A 201 SVTITGQ 207 (222)
T ss_dssp EEECCC-
T ss_pred EEEEeCC
Confidence 9998754
No 180
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.38 E-value=1.8e-12 Score=98.37 Aligned_cols=91 Identities=24% Similarity=0.314 Sum_probs=73.3
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc-CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM-GGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~-~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+.. ..++.+. .....|.|.++...|+|.|+|.+
T Consensus 6 ~~P~i~~~~~~~-~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~ 81 (192)
T 2iep_A 6 KAPVITTPLETV-DALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIR---ENGQLLTILSVEDSDDGIYCCTA 81 (192)
T ss_dssp EEEEESSCCCEE-EEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEE---GGGTEEEESSCCGGGCEEEEEEE
T ss_pred CCceeecCccce-eeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEc---CCccEEEEcCCCcccCeEEEEEE
Confidence 367777666665 889999999999999999999999999998875 4566552 23457999999999999999999
Q ss_pred EeCCce-EEEEEEEEee
Q psy5280 181 SNEHGT-ARQRVSSGNP 196 (202)
Q Consensus 181 ~N~~G~-~~~~~~L~V~ 196 (202)
.|..|. ....+.|.|.
T Consensus 82 ~~~~~~~~~~~~~l~v~ 98 (192)
T 2iep_A 82 NNGVGGAVESCGALQVK 98 (192)
T ss_dssp ECSSSCCEEEEEEEEEE
T ss_pred EcCCCceeEeEEEEEEE
Confidence 999987 4445555544
No 181
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.38 E-value=4.2e-12 Score=116.25 Aligned_cols=139 Identities=12% Similarity=0.052 Sum_probs=95.0
Q ss_pred eeeeecCCCCCeeeecCCCeecCC------------CCce-eeeccccccCCCC----------CCCCCCCeEEeccCCe
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHP------------DKSF-YFPRDFDLERPPR----------EGYAQAPRFLNQEHDT 113 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p------------~~~~-~~~~~~~ie~~~~----------~~~~~~P~fi~~~~~~ 113 (202)
+.|+++|.+.+.+.|.++|..+.. ...+ +....+...+.|. +....+|.|+ .+.+.
T Consensus 96 v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~-~~~~~ 174 (731)
T 2v5y_A 96 VYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL-RIQNV 174 (731)
T ss_dssp EEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-CCCCE
T ss_pred EEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc-cccce
Confidence 447778889899999999976432 0111 1111122222231 1123578887 55666
Q ss_pred eEEecCCeEEEEEEEEeecCCceE-EE--eCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce-EEE
Q psy5280 114 QYGIKNENSSLFWFVYGYPKPKVS-FY--FNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGT-ARQ 189 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P~P~i~-W~--k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-~~~ 189 (202)
.+.+|+++.|.|.+.|.|.|.+. |+ ++|..+.......+ ......+.|.|.++...|+|.|+|.|.|..|. .+.
T Consensus 175 -~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~-~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~ 252 (731)
T 2v5y_A 175 -EVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVT-SSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISN 252 (731)
T ss_dssp -EEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEEC-CSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECC
T ss_pred -EEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEe-ccccceEEEEEcccccccCeEEEEEEECCCCCccee
Confidence 89999999999999999999998 88 78877654332222 00011468999999999999999999999998 666
Q ss_pred EEEEEeecC
Q psy5280 190 RVSSGNPAQ 198 (202)
Q Consensus 190 ~~~L~V~~~ 198 (202)
.+.|.|..+
T Consensus 253 ~~~l~V~~~ 261 (731)
T 2v5y_A 253 YAELVVKEP 261 (731)
T ss_dssp CEEEEEECC
T ss_pred eEEEEEecC
Confidence 677777643
No 182
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.38 E-value=4.1e-12 Score=111.33 Aligned_cols=136 Identities=10% Similarity=0.055 Sum_probs=88.4
Q ss_pred eeeeecCCCCC--eeeecCCCeecCCCCc----------------eeeeccccccCCCCC-CC-----------------
Q psy5280 57 TQEKLNPERPK--FEPYLPPGVPFHPDKS----------------FYFPRDFDLERPPRE-GY----------------- 100 (202)
Q Consensus 57 ~~~~~~~~~~~--~~~w~~~g~~~~p~~~----------------~~~~~~~~ie~~~~~-~~----------------- 100 (202)
..|.+.+.+++ .+.|+++|.++..... .+.+.....++.|.| |.
T Consensus 134 l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~ 213 (523)
T 2rcj_C 134 LVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC 213 (523)
T ss_pred EEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeec
Confidence 45777887654 8999999988654311 122233344455544 21
Q ss_pred ---CCCCeEEeccCCeeEEecCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCC
Q psy5280 101 ---AQAPRFLNQEHDTQYGIKNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDR 171 (202)
Q Consensus 101 ---~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~ 171 (202)
..+|.+....... .+.+|+.+.|.|.+.|. |.| .|+|+|++..+.......+. ...+ .+.|.|.++...
T Consensus 214 ~~~~~~P~v~~~~~~~-~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~-~~~g~~~~~s~L~i~~~~~~ 291 (523)
T 2rcj_C 214 SASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVL-QSSGLYSLSSVVTVPSSSLG 291 (523)
T ss_pred CCCCcCCEEEecCCCc-ccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEe-cCCCcEEEEEEEEechhhcC
Confidence 1234443222222 45789999999999997 888 89999999875431110110 0111 358999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEe
Q psy5280 172 DVGMYEALASNEHGTARQRVSSGN 195 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~~~~~~L~V 195 (202)
| |.|+|.|.|..|.....+.|.|
T Consensus 292 d-G~Y~C~a~n~~g~~~~~~~l~v 314 (523)
T 2rcj_C 292 T-QTYICNVNHKPSNTKVDKRVEP 314 (523)
T ss_pred C-ceEEEEEEeCCCCcceEEecCC
Confidence 9 9999999999998766666543
No 183
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.37 E-value=2.1e-12 Score=97.44 Aligned_cols=94 Identities=12% Similarity=0.074 Sum_probs=71.7
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeC-CeEEEEEccCCCCCCEEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRN-GQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+....+..+..... ....|.|.++...|+|.|+|.+.
T Consensus 2 ~~~~~~~p~~~-~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 2 GLKLMGAPVKL-TVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp -----CCCEEE-EEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred CCEEEeCCcce-EEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 46677777776 89999999999999999999999999999998776655422211 13689999999999999999999
Q ss_pred eCCceE-EEEEEEEeec
Q psy5280 182 NEHGTA-RQRVSSGNPA 197 (202)
Q Consensus 182 N~~G~~-~~~~~L~V~~ 197 (202)
|..|.. +..+.|.|..
T Consensus 81 ~~~~~~~~~~~~l~V~~ 97 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEG 97 (182)
T ss_dssp SCTTCEECCCEEEEEEC
T ss_pred cCCCcEEEEEEEEEEec
Confidence 998753 3556666653
No 184
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.37 E-value=6e-14 Score=116.16 Aligned_cols=134 Identities=14% Similarity=0.147 Sum_probs=92.7
Q ss_pred ecCCCCCeeeecCCCeecCCCCc---------eeeeccccccCCCCC-CC-------------------------CCCCe
Q psy5280 61 LNPERPKFEPYLPPGVPFHPDKS---------FYFPRDFDLERPPRE-GY-------------------------AQAPR 105 (202)
Q Consensus 61 ~~~~~~~~~~w~~~g~~~~p~~~---------~~~~~~~~ie~~~~~-~~-------------------------~~~P~ 105 (202)
..+.+.+.+.|+++|..+..... .+....+..++.|.| |. ..+|.
T Consensus 149 ~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~ 228 (339)
T 3o4o_C 149 TRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPV 228 (339)
T ss_dssp CCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCE
T ss_pred ccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCE
Confidence 56677888999999998765411 122233444444433 10 12567
Q ss_pred EEeccCCeeEEecCCeEEEEEEE---Eeec-CCceEEEeCCEEccc---------CCcEEEEEeeCC----eEEEEEccC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFV---YGYP-KPKVSFYFNDELIEM---------GGRYDSSYTRNG----QATLFINKM 168 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v---~G~P-~P~i~W~k~g~~l~~---------~~r~~i~~~~~~----~~~L~I~~~ 168 (202)
++..+... .+.+|+++.|.|.+ .|.| .|.+.|++++..+.. ..++.+ ...+ ...|.|.++
T Consensus 229 i~~~~~~~-~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~L~i~~v 305 (339)
T 3o4o_C 229 IISPLKTI-SASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEY--SENNENYIEVPLIFDPV 305 (339)
T ss_dssp ECCCSCCC-CCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEEC--CCSSSCEEEECCEECSS
T ss_pred EecCCcee-EeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEe--cccCceEEEEEEEEEEe
Confidence 76665555 77889999999999 8999 889999999987642 222222 0011 127999999
Q ss_pred CCCCC-EEEEEEEEeCCceEEEEEEEEeec
Q psy5280 169 LDRDV-GMYEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 169 ~~~D~-G~Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
..+|+ |.|+|.|.|..|..++.+.|.+..
T Consensus 306 ~~~d~~G~Y~C~a~N~~G~~~~~~~~~~~~ 335 (339)
T 3o4o_C 306 TREDLHMDFKCVVHNTLSFQTLRTTVKEHH 335 (339)
T ss_dssp CCCSCCCCCEEEEEETTEEECCBCCCCC--
T ss_pred chhhcCccEEEEEEeccCceEEEEEhhHhc
Confidence 99998 999999999999998888776654
No 185
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.37 E-value=3e-12 Score=103.29 Aligned_cols=95 Identities=15% Similarity=0.121 Sum_probs=70.8
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCC-ceEEEeCCEEcccCCcEEEEEe-eCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKP-KVSFYFNDELIEMGGRYDSSYT-RNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~g~~l~~~~r~~i~~~-~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
+|.+...+... .+.+|+.+.|.|.+.|.|.+ .+.|++++..+........... ......|.|.++..+|+|.|+|.|
T Consensus 186 ~p~i~~~~~~~-~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (292)
T 4dkd_C 186 PPALTLVPAEL-VRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVA 264 (292)
T ss_dssp SCEEEEESSCB-CCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEE
T ss_pred CCeEEccCCce-eEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEE
Confidence 67776666665 66799999999999998764 5788899876654332221000 012358999999999999999999
Q ss_pred EeCCceEEEEEEEEeecC
Q psy5280 181 SNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~~ 198 (202)
.|..|..+.++.|.|...
T Consensus 265 ~N~~g~~~~~~~l~V~~~ 282 (292)
T 4dkd_C 265 SNVQGKHSTSMFFRVVES 282 (292)
T ss_dssp ECSSCEEEEEEEECC---
T ss_pred ecCCCCceeEEEEEEeeC
Confidence 999999999999998765
No 186
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.36 E-value=1.5e-12 Score=109.41 Aligned_cols=84 Identities=14% Similarity=0.218 Sum_probs=67.2
Q ss_pred CCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC--cEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 111 HDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG--RYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 111 ~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~--r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
.+. .+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... ++.. ........|.|.++..+|+|.|+|.|.|..|...
T Consensus 220 ~~~-~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 297 (395)
T 1bih_A 220 KDM-MAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITR-HNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQ 297 (395)
T ss_dssp CSE-EEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEES-CSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCE
T ss_pred Cce-EEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEE-EecCCCceEEEccCChhhCEEEEEEEEeCCCCce
Confidence 344 78899999999999999999999999999987543 3322 1112234899999999999999999999999876
Q ss_pred E-EEEEEee
Q psy5280 189 Q-RVSSGNP 196 (202)
Q Consensus 189 ~-~~~L~V~ 196 (202)
. .+.|.|.
T Consensus 298 ~~~~~l~V~ 306 (395)
T 1bih_A 298 KHSLKLTVV 306 (395)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 5 7777765
No 187
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.35 E-value=1e-11 Score=96.60 Aligned_cols=86 Identities=14% Similarity=0.082 Sum_probs=66.6
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-EEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-ELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
..+.+...+.+|+++.|.|.+.|.|.|.+.|+++. ..+ ...... ......|.|.++..+|+|.|.|.|.|..|.
T Consensus 5 i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 79 (202)
T 1vca_A 5 TTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGKVTN---EGTTSTLTMNPVSFGNEHSYLCTATCESRK 79 (202)
T ss_dssp EESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSEEEE---ETTEEEEEESSCCGGGCSEEEEEEEETTEE
T ss_pred ECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cceEEE---cCCccEEEECcCCHHHCEEEEEEEEECCce
Confidence 34555535559999999999999999999999843 221 122111 244678999999999999999999999999
Q ss_pred EEEEEEEEeecC
Q psy5280 187 ARQRVSSGNPAQ 198 (202)
Q Consensus 187 ~~~~~~L~V~~~ 198 (202)
.+..+.|.|..+
T Consensus 80 ~~~~~~l~V~~~ 91 (202)
T 1vca_A 80 LEKGIQVEIYSF 91 (202)
T ss_dssp EEEEEEEEEEBC
T ss_pred EeeEEEEEEEeC
Confidence 888888888753
No 188
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.35 E-value=3.7e-12 Score=97.50 Aligned_cols=131 Identities=11% Similarity=0.009 Sum_probs=83.6
Q ss_pred eeeeecCCCCCeeeecCCCeecCC---------CCceeeeccccccCCCCC-CC---------------------CCCCe
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHP---------DKSFYFPRDFDLERPPRE-GY---------------------AQAPR 105 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p---------~~~~~~~~~~~ie~~~~~-~~---------------------~~~P~ 105 (202)
..|...+ .+..+.|+|+|..+.. ....+.+..+..++.|.| |. ..+|.
T Consensus 23 L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~ 101 (188)
T 1oll_A 23 ICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPT 101 (188)
T ss_dssp EEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCE
T ss_pred EEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCe
Confidence 4465544 3457889999976431 112233344444555443 21 01344
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
+...+ +. .+.+|+++.|.|.+.+ +.+.+.|+|+|..+... . ........|.|.++..+|+|.|+|.|.|...
T Consensus 102 i~~~p-~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~----~-~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~ 173 (188)
T 1oll_A 102 LSVHP-GP-EVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQ----R-GYGKVQAEFPLGPVTTAHRGTYRCFGSYNNH 173 (188)
T ss_dssp EEEES-CS-EEETTCEEEEEEECSS-SCSEEEEEEESSSCEEE----E-EECSSEEEEEEEECCGGGCEEEEEECEEETT
T ss_pred EEECC-CC-ccccCCEEEEEEEcCC-CCCEEEEEECCcccccc----c-cCCCceeEEEECCCCcCCCcEEEEEEEcCCC
Confidence 44333 34 6789999999999876 45789999998765431 1 1124567899999999999999999998752
Q ss_pred ---eEEEEEEEEee
Q psy5280 186 ---TARQRVSSGNP 196 (202)
Q Consensus 186 ---~~~~~~~L~V~ 196 (202)
..+..+.|.|.
T Consensus 174 ~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 174 AWSFPSEPVKLLVT 187 (188)
T ss_dssp EECCCCCCEEEEEE
T ss_pred cCCCCCCcEEEEec
Confidence 22344566654
No 189
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.35 E-value=1.3e-12 Score=100.43 Aligned_cols=81 Identities=10% Similarity=-0.034 Sum_probs=60.9
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSG 194 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~ 194 (202)
.+.+|+.+.|.|.+.|.|.|.++|++++..+... ... ........+.|..+...|.|.|+|.|.|..|.....+.|.
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~--~~~-~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~ 190 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTS--HIR-TPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIID 190 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEE--EEE-CTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEEC
T ss_pred ecCCCCeEEEEEEccccCCceEEEEeCCCCccCc--eee-CCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEE
Confidence 3457999999999999999999999987654321 111 0111225567888999999999999999999999999888
Q ss_pred eecC
Q psy5280 195 NPAQ 198 (202)
Q Consensus 195 V~~~ 198 (202)
|..+
T Consensus 191 v~~~ 194 (202)
T 3bp6_B 191 PLSR 194 (202)
T ss_dssp C---
T ss_pred ecCc
Confidence 7654
No 190
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.35 E-value=1.5e-12 Score=107.47 Aligned_cols=73 Identities=11% Similarity=0.080 Sum_probs=47.8
Q ss_pred EecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 116 GIKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
+.+|+.+.|.|.+.|.|+| .+.|+|||..+.......+.....+ ...|.|..+..+|+|.|+|.|.|.+|..-
T Consensus 232 ~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~ 310 (327)
T 2wng_A 232 VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAV 310 (327)
T ss_dssp CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCE
T ss_pred cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCc
Confidence 4689999999999996554 7999999998864321111111111 14688999999999999999999999753
No 191
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.35 E-value=3.7e-12 Score=98.58 Aligned_cols=77 Identities=12% Similarity=0.172 Sum_probs=56.5
Q ss_pred EecCCeEEEEEEEEeec-C-CceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 116 GIKNENSSLFWFVYGYP-K-PKVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~P-~-P~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
+.+|+.+.|.|.+.|.+ . +.++|+|+|..+.............+ ...|.|..+..+|+|.|+|.|.|..+....
T Consensus 126 ~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 205 (213)
T 3mj8_L 126 ELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEK 205 (213)
T ss_dssp HHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEE
T ss_pred cccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEe
Confidence 34799999999999974 3 38999999998864311000000111 356999999999999999999999988776
Q ss_pred EEE
Q psy5280 190 RVS 192 (202)
Q Consensus 190 ~~~ 192 (202)
++.
T Consensus 206 ~~~ 208 (213)
T 3mj8_L 206 SLS 208 (213)
T ss_dssp EEC
T ss_pred eec
Confidence 654
No 192
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.35 E-value=5.3e-12 Score=98.01 Aligned_cols=83 Identities=10% Similarity=0.032 Sum_probs=59.1
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeC-CEEcccCCcEEEEEeeCC-eEEEEEccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFN-DELIEMGGRYDSSYTRNG-QATLFINKMLDRDVGMYEALASNEHGTARQRVS 192 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~-g~~l~~~~r~~i~~~~~~-~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 192 (202)
.+.+|+.+.|.|.+.|.|.|.++|+++ +..+.............+ ...+.+..+...|.|.|+|.|.|..|.....+.
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~ 206 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAE 206 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEE
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEE
Confidence 456799999999999999999999998 665544332212111111 112222244578999999999999999999999
Q ss_pred EEeec
Q psy5280 193 SGNPA 197 (202)
Q Consensus 193 L~V~~ 197 (202)
|.|.+
T Consensus 207 l~v~~ 211 (222)
T 3sbw_C 207 LVIPE 211 (222)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 98874
No 193
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.35 E-value=1.6e-11 Score=93.06 Aligned_cols=89 Identities=17% Similarity=0.115 Sum_probs=73.5
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEe-CCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYF-NDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k-~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
|...+.+. .+.+|+++.|.|.+.|.|. .+.|++ ++..+....++.+.. ......|.|.++...|+|.|+|.+.|..
T Consensus 5 ~~~~~~~~-~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (189)
T 2v44_A 5 VTISLSKV-ELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQK-EGVRSRLTIYNANIEDAGIYRCQATDAK 81 (189)
T ss_dssp EEESCSEE-EEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred EEecCCce-EEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEEC-CCCeEEEEEccCCcccCeEEEEEEEeCC
Confidence 45556666 8899999999999999988 899999 788888777877633 3446799999999999999999999999
Q ss_pred ceE-EEEEEEEeec
Q psy5280 185 GTA-RQRVSSGNPA 197 (202)
Q Consensus 185 G~~-~~~~~L~V~~ 197 (202)
|.. +..+.|.|..
T Consensus 82 g~~~~~~~~l~v~~ 95 (189)
T 2v44_A 82 GQTQEATVVLEIYQ 95 (189)
T ss_dssp SCEEEEEEEEEEEC
T ss_pred CCcEEEEEEEEEec
Confidence 976 5667777654
No 194
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.34 E-value=5.5e-12 Score=95.23 Aligned_cols=80 Identities=19% Similarity=0.238 Sum_probs=64.8
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEccc--CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM--GGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~--~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+.. ..++.+ ...+.|.|.++...|+|.|+|.+
T Consensus 2 ~~~~~~~~~~~-~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~~ 76 (189)
T 2v5t_A 2 MLTFREVVSPQ-EFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAM----LANNNLQILNINKSDEGIYRCEG 76 (189)
T ss_dssp CCEEEECCSSE-EEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEE----CTTSCEEETTCCGGGCEEEEEEE
T ss_pred CceeeccCCCE-EEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEE----ecCCCEEEeeCCHhHCcEEEEEE
Confidence 57888888888 999999999999999999999999999988764 455655 44567999999999999999999
Q ss_pred EeCCceE
Q psy5280 181 SNEHGTA 187 (202)
Q Consensus 181 ~N~~G~~ 187 (202)
.|..+..
T Consensus 77 ~~~~~~~ 83 (189)
T 2v5t_A 77 RVEARGE 83 (189)
T ss_dssp EETTTTE
T ss_pred EEcCCCc
Confidence 9998644
No 195
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.34 E-value=4.5e-12 Score=112.56 Aligned_cols=135 Identities=9% Similarity=-0.044 Sum_probs=87.6
Q ss_pred eeeeecCCCCCeeeecCCCeecCCC----Cce--eeeccccccCCCCC-CC-----------------CCCCeEEeccCC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHPD----KSF--YFPRDFDLERPPRE-GY-----------------AQAPRFLNQEHD 112 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p~----~~~--~~~~~~~ie~~~~~-~~-----------------~~~P~fi~~~~~ 112 (202)
..|.+.|.|.+.+.|++++.++... ... .....+..++.|.| |. ..+|.+ .+.+
T Consensus 159 L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~ 236 (527)
T 3qs9_E 159 LVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQ 236 (527)
T ss_dssp EEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCE
T ss_pred EEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCc
Confidence 5688889999999999988764211 000 01122223444443 21 122333 3334
Q ss_pred eeEEecCCeEEEEEEEE-eecCCceEEEeCCEEcccCCcEEEEEee-----CCeEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 113 TQYGIKNENSSLFWFVY-GYPKPKVSFYFNDELIEMGGRYDSSYTR-----NGQATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 113 ~~~v~~G~~v~L~C~v~-G~P~P~i~W~k~g~~l~~~~r~~i~~~~-----~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
. .+.+|+.+.|.|.+. |.|.|.++|+|++..+.....+...... ....+|.|.++..+|+|.|+|.|.|.
T Consensus 237 ~-~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~--- 312 (527)
T 3qs9_E 237 L-FLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH--- 312 (527)
T ss_dssp E-EECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---
T ss_pred e-EEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---
Confidence 4 788999999999997 9999999999999888765444321111 12356999999999999999999998
Q ss_pred EEEEEEEEeec
Q psy5280 187 ARQRVSSGNPA 197 (202)
Q Consensus 187 ~~~~~~L~V~~ 197 (202)
.+.++.|.|..
T Consensus 313 ~~~~~~L~V~~ 323 (527)
T 3qs9_E 313 PSQSALVTIVE 323 (527)
T ss_dssp EEEEEEEEEC-
T ss_pred CCceEEEEEEc
Confidence 56667777653
No 196
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.34 E-value=2.2e-12 Score=102.36 Aligned_cols=120 Identities=16% Similarity=0.078 Sum_probs=83.3
Q ss_pred eeeee-cCCCCCeeeecCCCeecCCC--CceeeeccccccCCCCC-CC-----------------C--CCCeEEeccCCe
Q psy5280 57 TQEKL-NPERPKFEPYLPPGVPFHPD--KSFYFPRDFDLERPPRE-GY-----------------A--QAPRFLNQEHDT 113 (202)
Q Consensus 57 ~~~~~-~~~~~~~~~w~~~g~~~~p~--~~~~~~~~~~ie~~~~~-~~-----------------~--~~P~fi~~~~~~ 113 (202)
..|.+ .+.+.+.+.|+++|..+... ...+....+..++.|.| |. . .+|.+...+ ..
T Consensus 102 l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~ 180 (262)
T 3rjd_A 102 LRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TS 180 (262)
T ss_dssp EEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CS
T ss_pred EEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ce
Confidence 34666 56677789999999886432 22233344444555543 21 0 234443333 44
Q ss_pred eEEecCCeEEEEEEEEeecC-Cc----eEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 114 QYGIKNENSSLFWFVYGYPK-PK----VSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P~-P~----i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
.+.+|+.+.|.|.+.|.|. |. +.|++++..+... .....|.|.++..+|+|.|+|.|.|..|..
T Consensus 181 -~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 181 -PLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR---------NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp -SEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE---------ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred -eecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc---------CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 6789999999999999987 64 6789999876531 235689999999999999999999999975
No 197
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.34 E-value=2.7e-12 Score=110.94 Aligned_cols=92 Identities=18% Similarity=0.200 Sum_probs=74.0
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCE-EcccC---CcEEEEEeeCCeEEEEEccCCCCCCEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDE-LIEMG---GRYDSSYTRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~-~l~~~---~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
.+|.+...+.+. .+.+|+++.|.|.+ +.|.|.+.|++++. .+... .++.+ ...++|.|.++..+|+|.|+
T Consensus 340 ~~P~i~~~~~~~-~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~----~~~~~L~I~~v~~~D~G~Y~ 413 (440)
T 3zyj_A 340 YAPVIVEPPADL-NVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAV----LSDGTLNFTNVTVQDTGMYT 413 (440)
T ss_dssp CCCCEEECCCCE-EECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEE----CTTCCEEESSCCSTTCEEEE
T ss_pred CCCcccccccce-eeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEE----ccCCeEEEccCChhhCEEEE
Confidence 468887777777 89999999999999 67999999999544 33322 35554 44567999999999999999
Q ss_pred EEEEeCCceEEEEEEEEeecCC
Q psy5280 178 ALASNEHGTARQRVSSGNPAQG 199 (202)
Q Consensus 178 C~a~N~~G~~~~~~~L~V~~~~ 199 (202)
|.|.|..|..++++.+.|.++.
T Consensus 414 C~a~N~~G~~~~~~~~~v~~~~ 435 (440)
T 3zyj_A 414 CMVSNSVGNTTASATLNVTGTH 435 (440)
T ss_dssp EEEECSSCEEEEEEEEEEC---
T ss_pred EEEEcCCCcEEEEEEEEEeccc
Confidence 9999999999999999998653
No 198
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.33 E-value=3.5e-12 Score=108.90 Aligned_cols=128 Identities=14% Similarity=0.097 Sum_probs=84.8
Q ss_pred eeeeecC-CCCC-eeeecCCCeecCCCC------------c-----eeeeccccccCCCCC-CC----------------
Q psy5280 57 TQEKLNP-ERPK-FEPYLPPGVPFHPDK------------S-----FYFPRDFDLERPPRE-GY---------------- 100 (202)
Q Consensus 57 ~~~~~~~-~~~~-~~~w~~~g~~~~p~~------------~-----~~~~~~~~ie~~~~~-~~---------------- 100 (202)
..|.+.+ .+.+ .+.|+++|.++.... . .+.+.....++.|.| |.
T Consensus 136 l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~ 215 (438)
T 1qgc_4 136 VVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR 215 (438)
T ss_dssp EEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEET
T ss_pred EEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceeccccc
Confidence 4577766 4555 799999998876540 1 112233333455544 21
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEEcc-----------------cCCcEEEEEee-C
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DELIE-----------------MGGRYDSSYTR-N 158 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~l~-----------------~~~r~~i~~~~-~ 158 (202)
..++.++..+... .+.+|+++.|.|.+.|.| .+.+.|+|+ +..+. ...++.+.... .
T Consensus 216 ~~~~~~~~~~~~~-~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 294 (438)
T 1qgc_4 216 NECEVMLVESGGG-LVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAK 294 (438)
T ss_dssp TC-CCEEEEECCE-EECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTT
T ss_pred ccceeEEecCCce-EEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCC
Confidence 1123344445555 788999999999999998 679999996 43321 13566653321 2
Q ss_pred CeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 159 GQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 159 ~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
....|.|.++..+|+|.|+|.|.|..|
T Consensus 295 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 321 (438)
T 1qgc_4 295 NTLYLQMSSLRSADTAMYYCVRREDGG 321 (438)
T ss_dssp TEEEEEECSCCGGGCCEEEEEECCSSS
T ss_pred CeEEEEECCCChhhCEEEEEEEEccCC
Confidence 356899999999999999999999544
No 199
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.33 E-value=3.7e-12 Score=104.16 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=85.6
Q ss_pred eeeeecCCC-CCeeeecCCCeecC----CC------CceeeeccccccCCCCC-CCC-----------------CCCeEE
Q psy5280 57 TQEKLNPER-PKFEPYLPPGVPFH----PD------KSFYFPRDFDLERPPRE-GYA-----------------QAPRFL 107 (202)
Q Consensus 57 ~~~~~~~~~-~~~~~w~~~g~~~~----p~------~~~~~~~~~~ie~~~~~-~~~-----------------~~P~fi 107 (202)
..|.+.+.+ .+.+.|+++|..+. .. ...+.+..+..++.|.| |.+ .+|.+.
T Consensus 25 L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~ 104 (315)
T 1itb_B 25 RPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLC 104 (315)
T ss_dssp CBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEECCCTTSS
T ss_pred EEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeCCCCCcc
Confidence 557777776 67899999996421 11 11122344555555554 321 122221
Q ss_pred eccC--CeeEEecCCeEEEEEEE------EeecCCceEEEeCCEEcccC-CcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 108 NQEH--DTQYGIKNENSSLFWFV------YGYPKPKVSFYFNDELIEMG-GRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 108 ~~~~--~~~~v~~G~~v~L~C~v------~G~P~P~i~W~k~g~~l~~~-~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
..+. ....+..|+++.|.|.+ .|.|.|.++|+|++..+... .++.. ....|.|.++..+|+|.|+|
T Consensus 105 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C 179 (315)
T 1itb_B 105 YNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSG-----VKDRLIVMNVAEKHRGNYTC 179 (315)
T ss_dssp SCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEE-----ETTEEEESSCCGGGCEEEEE
T ss_pred cccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEee-----cCceEEEEeceehhCcEEEE
Confidence 1111 11367889999999998 89999999999999998653 33322 24589999999999999999
Q ss_pred EEE-eCCceE
Q psy5280 179 LAS-NEHGTA 187 (202)
Q Consensus 179 ~a~-N~~G~~ 187 (202)
.|. |..|..
T Consensus 180 ~a~~n~~g~~ 189 (315)
T 1itb_B 180 HASYTYLGKQ 189 (315)
T ss_dssp EEEEEETTEE
T ss_pred EEEcCCCCcE
Confidence 999 899977
No 200
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.33 E-value=2.5e-12 Score=100.35 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=62.6
Q ss_pred CeEEeccCCeeEEecCCeE-EEEEEE-EeecCCceEEEeCCEEcccCC----cEEEEEe---eCC-----eEEEEEccCC
Q psy5280 104 PRFLNQEHDTQYGIKNENS-SLFWFV-YGYPKPKVSFYFNDELIEMGG----RYDSSYT---RNG-----QATLFINKML 169 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v-~L~C~v-~G~P~P~i~W~k~g~~l~~~~----r~~i~~~---~~~-----~~~L~I~~~~ 169 (202)
|.+...+... .+.+|+.+ .|.|.+ .|.|.|.+.|+|++..+.... ++.+... ... .+.|.|....
T Consensus 119 ~~~~~~~~~~-~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~ 197 (231)
T 2pet_A 119 TEVSPNKGTL-SVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRK 197 (231)
T ss_dssp CEEEECCSSC-CTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCG
T ss_pred cEEecCCcce-eecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecch
Confidence 4444444444 55688888 999999 999999999999999987654 5444211 011 1568887555
Q ss_pred CCCCEEEEEEEEe-----CCce-EEEEEEEEe
Q psy5280 170 DRDVGMYEALASN-----EHGT-ARQRVSSGN 195 (202)
Q Consensus 170 ~~D~G~Y~C~a~N-----~~G~-~~~~~~L~V 195 (202)
..|.|.|+|.|.| ..|. .+..+.|.|
T Consensus 198 ~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 198 DDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp GGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred hhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 5569999999999 4555 444455544
No 201
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.33 E-value=1.8e-12 Score=111.38 Aligned_cols=123 Identities=9% Similarity=0.017 Sum_probs=87.9
Q ss_pred eeeeecCCCCCee-----eecCCCeecCC-CCceeeeccccccCCCCCCCC----------------CCCeEE-eccCCe
Q psy5280 57 TQEKLNPERPKFE-----PYLPPGVPFHP-DKSFYFPRDFDLERPPREGYA----------------QAPRFL-NQEHDT 113 (202)
Q Consensus 57 ~~~~~~~~~~~~~-----~w~~~g~~~~p-~~~~~~~~~~~ie~~~~~~~~----------------~~P~fi-~~~~~~ 113 (202)
..|.+.+ +.+.+ .|.|+|..+.. ....|....+.. ++|+.|.+ .+|.+. ..+.+.
T Consensus 19 L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~~~~~l~i~~v~~-d~gY~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~ 96 (450)
T 1z7z_I 19 VTCSTSC-DQPMLLGIETPLPKKELLLPGNNRKVYELSNVQE-DSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPS 96 (450)
T ss_dssp EEEECCS-SCCCEEEECSSSCEEECCSSTTTEEEEEEEEECS-CBCCEEEEEETTEEEEEECEEEEEBCCSEEEECCCCS
T ss_pred EEEEccC-CCcccccccceeeecceEecCCCceEEEEEeccc-CCeeEEEEeCCCCcceeEEEEEEEeCCCcceecCCCc
Confidence 5577778 76777 89999975432 222333344443 55654421 345554 445555
Q ss_pred eEEecCCeEEEEEEEEeecCC---ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 114 QYGIKNENSSLFWFVYGYPKP---KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P~P---~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
.+.+|+++.|.|.+.|.|.| .|+|+|++..+....... ....+.|.|..+...|+|.|+|.|.|..|.
T Consensus 97 -~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 167 (450)
T 1z7z_I 97 -WQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG----EPAEVTTTVLVRRDHHGANFSCRTELDLRP 167 (450)
T ss_dssp -EECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT----TTEEEEEEEECCSSCSSCEEEEEEEEECGG
T ss_pred -eEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc----cccceEEEEEeeccccCceEEEEEEcccCC
Confidence 78899999999999999998 899999999886533211 133568999999999999999999999875
No 202
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.32 E-value=9.9e-13 Score=100.17 Aligned_cols=68 Identities=12% Similarity=0.041 Sum_probs=56.1
Q ss_pred ecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEee
Q psy5280 117 IKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
..+.++.|.|.+.|.|.|.++|+|++..+..+.+. .|..+..+|+|.|+|.|.|.+|..++.+.|.+.
T Consensus 108 ~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~------------~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~~ 175 (176)
T 1hng_A 108 WECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQK------------TMSYQWTNLRAPFKCKAVNRVSQESEMEVVNCP 175 (176)
T ss_dssp EETTTTEEEEECSSCSSCEEEEEETTEEEEEESSS------------EEEEECSCCSSCEEEEEEETTEEEEEEECCCCC
T ss_pred ecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcE------------EEEEEEccCCeEEEEEEEecCCCceecccccCC
Confidence 34567999999999999999999999987654433 233667899999999999999999988877654
No 203
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.32 E-value=2.3e-12 Score=100.81 Aligned_cols=83 Identities=14% Similarity=0.031 Sum_probs=66.2
Q ss_pred EEecCCeEEEEEE---EEeecCCceEEEeCCEEccc-----------------CCcEEEEEeeCCeEEEEEccCCCCCCE
Q psy5280 115 YGIKNENSSLFWF---VYGYPKPKVSFYFNDELIEM-----------------GGRYDSSYTRNGQATLFINKMLDRDVG 174 (202)
Q Consensus 115 ~v~~G~~v~L~C~---v~G~P~P~i~W~k~g~~l~~-----------------~~r~~i~~~~~~~~~L~I~~~~~~D~G 174 (202)
++..|+++.|.|. +.|.|.|.|+|+|+|..+.. ..++.+ +...+...|.|.++..+|+|
T Consensus 4 ta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~G 82 (203)
T 4fa8_A 4 TAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDI-HRSANTFFLVVTAANISHDG 82 (203)
T ss_dssp EEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEE-EEETTEEEEEESSCCGGGCE
T ss_pred EEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEE-EEcCCEEEEEEccCCHHHCe
Confidence 7889999999994 67889999999998642211 123333 23355788999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEeecC
Q psy5280 175 MYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 175 ~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
.|+|.|.|..|..+..+.|.|..+
T Consensus 83 ~Y~C~a~n~~g~~~~~~~l~V~~p 106 (203)
T 4fa8_A 83 NYLCRMKLGETEVTKQEHLSVVKP 106 (203)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEE
T ss_pred EEEEEEEcCCCcEEEEEEEEecCC
Confidence 999999999999999998888653
No 204
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.32 E-value=1.1e-11 Score=94.38 Aligned_cols=87 Identities=13% Similarity=0.044 Sum_probs=71.5
Q ss_pred CCeEEeccCCeeEEec-CCeEEEEEEEEeecC--CceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIK-NENSSLFWFVYGYPK--PKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~-G~~v~L~C~v~G~P~--P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
+|.+.. +.+. .+.+ |+++.|.|.+.|.|. +.+.|+|++..+...... .....|.|.++..+|+|.|+|.
T Consensus 3 ~P~i~~-~~~~-~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~ 74 (190)
T 2wv3_A 3 EPRIVT-SEEV-IIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKN------ASNMEYRINKPRAEDSGEYHCV 74 (190)
T ss_dssp CCEEEE-CCCE-ECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBC------CSEEEEEESSCCGGGCEEEEEE
T ss_pred CCcccc-cceE-EEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceE------eccEEEEEecCCcccCEEEEEE
Confidence 677665 3344 5556 999999999999998 789999999998765432 2468899999999999999999
Q ss_pred EEeCCceEEEEEEEEeecC
Q psy5280 180 ASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|. |.....+.|.|..+
T Consensus 75 ~~n~-~~~~~~~~l~V~~~ 92 (190)
T 2wv3_A 75 YHFV-SAPKANATIEVKAA 92 (190)
T ss_dssp EEET-TEEEEEEEEEEECC
T ss_pred EEeC-CcccccEEEEEecC
Confidence 9999 98888888887653
No 205
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.31 E-value=4.1e-12 Score=106.55 Aligned_cols=88 Identities=22% Similarity=0.256 Sum_probs=69.3
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
+|.+.........+.+|+.+.|.|.+.|.|.|.+.|+|++..+... + ......|.|.++..+|+|.|+|.|.|
T Consensus 206 ~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~--~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n 278 (382)
T 1cs6_A 206 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK--W-----LSSEPLLHIQNVDFEDEGTYECEAEN 278 (382)
T ss_dssp EEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC--C-----SBSSSEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE--E-----ecCCcEEEEccCChhhCEEEEEEEEc
Confidence 3444333222337889999999999999999999999988765431 1 12356899999999999999999999
Q ss_pred CCceEEEEEEEEeec
Q psy5280 183 EHGTARQRVSSGNPA 197 (202)
Q Consensus 183 ~~G~~~~~~~L~V~~ 197 (202)
..|.....+.|.|..
T Consensus 279 ~~g~~~~~~~l~V~~ 293 (382)
T 1cs6_A 279 IKGRDTYQGRIIIHA 293 (382)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEec
Confidence 999988888887753
No 206
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.31 E-value=1.7e-11 Score=94.13 Aligned_cols=89 Identities=15% Similarity=-0.009 Sum_probs=68.4
Q ss_pred cCCeeEEecCCeEEEEEEEEeecC-----CceEEEe-CCEEcccCCcEEEEEe--eCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPK-----PKVSFYF-NDELIEMGGRYDSSYT--RNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~-----P~i~W~k-~g~~l~~~~r~~i~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
+.....+.+|+++.|.|.+.|.|. +.+.|+| ++.......++.+... ..+...|.|.++..+|+|.|+|.+.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 333348899999999999999987 8899999 5555545566655111 0134789999999999999999999
Q ss_pred eCCceEEEEEEEEeecC
Q psy5280 182 NEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~~ 198 (202)
|..|.....+.|.|.++
T Consensus 88 ~~~~~~~~~~~l~V~~~ 104 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKAS 104 (202)
T ss_dssp ETTEEEEEEEEEEEEBC
T ss_pred eCCCcceEEEEEEecCC
Confidence 99998888888888764
No 207
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.31 E-value=5.6e-12 Score=97.52 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=55.9
Q ss_pred ecCCeEEEEEEEEe-ecCC-ceEEEeCCEEcccCCcEEE--EEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 117 IKNENSSLFWFVYG-YPKP-KVSFYFNDELIEMGGRYDS--SYTRNG----QATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 117 ~~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~~~~r~~i--~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
.+|+.+.|.|.+.| .|.| .++|+|+|..+........ .....+ .+.|.|.++..+|+|.|+|.|.|......
T Consensus 125 ~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 125 LTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 204 (213)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred cCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCc
Confidence 46899999999998 5665 7999999998876511111 000011 24899999999999999999999987754
Q ss_pred EEEEE
Q psy5280 189 QRVSS 193 (202)
Q Consensus 189 ~~~~L 193 (202)
....+
T Consensus 205 ~~~~i 209 (213)
T 3d9a_L 205 IVKSF 209 (213)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 44443
No 208
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.30 E-value=3.3e-12 Score=106.03 Aligned_cols=78 Identities=13% Similarity=0.060 Sum_probs=63.7
Q ss_pred EEecCCeEEEEEEE-----EeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC-ceE-
Q psy5280 115 YGIKNENSSLFWFV-----YGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH-GTA- 187 (202)
Q Consensus 115 ~v~~G~~v~L~C~v-----~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~-G~~- 187 (202)
.+.+|+.+.|.|.+ .|.|.|.+.|+|++..+....++.. ....|.|.++..+|+|.|+|.|.|.. |..
T Consensus 131 ~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~ 205 (349)
T 4dep_C 131 LYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIP-----EGMNLSFLIALISNNGNYTCVVTYPENGRTF 205 (349)
T ss_dssp EETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEE-----ETTEEEEESCCGGGCEEEEEEEEEEETTEEE
T ss_pred eeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceee-----cCCEEEEeeeeecCCcEEEEEEEEeeCCEEE
Confidence 67789999999985 8899999999999999876555443 23679999999999999999999987 554
Q ss_pred --EEEEEEEeec
Q psy5280 188 --RQRVSSGNPA 197 (202)
Q Consensus 188 --~~~~~L~V~~ 197 (202)
+..+.|.|..
T Consensus 206 ~~~~~~~l~v~~ 217 (349)
T 4dep_C 206 HLTRTLTVKVVG 217 (349)
T ss_dssp EEEEEEEEEEEC
T ss_pred EEEEEEEEEEEc
Confidence 5666676653
No 209
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.30 E-value=1.5e-11 Score=108.88 Aligned_cols=96 Identities=16% Similarity=0.103 Sum_probs=72.8
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeec-CCceEEEeCCEEcc----c---------CCcEEEEEeeC--CeEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYP-KPKVSFYFNDELIE----M---------GGRYDSSYTRN--GQATLFI 165 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P-~P~i~W~k~g~~l~----~---------~~r~~i~~~~~--~~~~L~I 165 (202)
.+|.|+..+... .+.+|+.+.|.|.+.|.+ .+.+.|+|++..+. . ..++.+..... ....|.|
T Consensus 111 ~~p~~~~~~~~~-~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I 189 (585)
T 2ocw_A 111 QGPGLLNDTKVY-TVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVI 189 (585)
T ss_pred cCccccCCCccE-EEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEE
Confidence 467776666666 889999999999999764 56799999875321 1 24444422111 1247999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 166 NKMLDRDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
.++..+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 190 ~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 222 (585)
T 2ocw_A 190 NQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 222 (585)
T ss_pred ccCChhHCeEEEEEeccCCccccceEEEEEccC
Confidence 999999999999999999999988898888753
No 210
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.28 E-value=9.5e-12 Score=96.35 Aligned_cols=91 Identities=25% Similarity=0.309 Sum_probs=70.7
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC----cEEEEEeeCCeE---EEEEccCCCCCC
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG----RYDSSYTRNGQA---TLFINKMLDRDV 173 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~----r~~i~~~~~~~~---~L~I~~~~~~D~ 173 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++..+.... ++.. .... .|.|.++...|+
T Consensus 7 ~~~P~i~~~p~~~-~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~----~~~~~~~~l~i~~v~~~d~ 81 (217)
T 2vr9_A 7 YQSPRIIEHPTDL-VVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQF----KDGALFFYRTMQGKKEQDG 81 (217)
T ss_dssp CCCCEEEECCCCE-EECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEEC----TTSCEEESSCCBSSSCBCC
T ss_pred cCCCEEecCCCce-EEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEe----cCCceEEEEEeccCCcccC
Confidence 4589999888887 89999999999999999999999999999987642 2222 2121 236788999999
Q ss_pred EEEEEEEEeCCceEE-EEEEEEee
Q psy5280 174 GMYEALASNEHGTAR-QRVSSGNP 196 (202)
Q Consensus 174 G~Y~C~a~N~~G~~~-~~~~L~V~ 196 (202)
|.|+|.+.|..|... ..+.|.|.
T Consensus 82 G~Y~C~~~n~~g~~~~~~~~l~v~ 105 (217)
T 2vr9_A 82 GEYWCVAKNRVGQAVSRHASLQIA 105 (217)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC
T ss_pred ceEEEEEecCCCccccccceEEEE
Confidence 999999999999763 24444443
No 211
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.28 E-value=1.8e-11 Score=107.24 Aligned_cols=137 Identities=10% Similarity=-0.024 Sum_probs=88.1
Q ss_pred eeeeecCC-CCC-eeeecCCCeecCC---------CCc-----eeeeccccccCCCCC-CCC----------------CC
Q psy5280 57 TQEKLNPE-RPK-FEPYLPPGVPFHP---------DKS-----FYFPRDFDLERPPRE-GYA----------------QA 103 (202)
Q Consensus 57 ~~~~~~~~-~~~-~~~w~~~g~~~~p---------~~~-----~~~~~~~~ie~~~~~-~~~----------------~~ 103 (202)
..|.+.+. |.+ .+.|+++|..+.. +.. .+.+.....++ |.| |.+ ..
T Consensus 239 l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~ 317 (523)
T 2rcj_C 239 LGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSL 317 (523)
T ss_pred EEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcC
Confidence 45777776 556 7999999976431 111 22234444455 544 211 12
Q ss_pred Ce-EEeccCCeeEEecCCeEEEEEEEEeecC----CceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCE
Q psy5280 104 PR-FLNQEHDTQYGIKNENSSLFWFVYGYPK----PKVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVG 174 (202)
Q Consensus 104 P~-fi~~~~~~~~v~~G~~v~L~C~v~G~P~----P~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G 174 (202)
|. ++..+.....+.+|+.+.|.|.+.|.|+ +.|+|+|+|..+.............+ ...|.|..+..+|+|
T Consensus 318 P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G 397 (523)
T 2rcj_C 318 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGK 397 (523)
T ss_pred ceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCC
Confidence 43 4545544423788999999999999764 48999999999875443211111111 245889999999999
Q ss_pred EEEEEEEeCCceEEEEEEEE
Q psy5280 175 MYEALASNEHGTARQRVSSG 194 (202)
Q Consensus 175 ~Y~C~a~N~~G~~~~~~~L~ 194 (202)
.|+|.|.|..|.......|.
T Consensus 398 ~Y~C~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 398 EYKCKVSNKALPAPIEKTIS 417 (523)
T ss_pred eEEEEEeCCCCCCceeEEEE
Confidence 99999999988765554443
No 212
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.26 E-value=1.2e-11 Score=96.11 Aligned_cols=141 Identities=6% Similarity=-0.094 Sum_probs=86.0
Q ss_pred eeeeeecCCCCCeeeecCCC-eecC------CCCceeeeccccccCCCCC-CCC----------------CCCeEE-ecc
Q psy5280 56 DTQEKLNPERPKFEPYLPPG-VPFH------PDKSFYFPRDFDLERPPRE-GYA----------------QAPRFL-NQE 110 (202)
Q Consensus 56 ~~~~~~~~~~~~~~~w~~~g-~~~~------p~~~~~~~~~~~ie~~~~~-~~~----------------~~P~fi-~~~ 110 (202)
...|.+.|.+.+.+.|.+.+ .++. .....+.+..+..++.|.| |.+ .+|..+ ..+
T Consensus 20 ~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~~~~~ 99 (202)
T 1vca_A 20 SLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHL 99 (202)
T ss_dssp EEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCSCCEEEE
T ss_pred EEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCCCCEeCC
Confidence 36688888888889998832 1110 1111233455555565554 311 223221 112
Q ss_pred CCeeEEecCCeEEEEEEEEeecC---CceEEEeCCEEcccCCcEEEE-E--eeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 111 HDTQYGIKNENSSLFWFVYGYPK---PKVSFYFNDELIEMGGRYDSS-Y--TRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 111 ~~~~~v~~G~~v~L~C~v~G~P~---P~i~W~k~g~~l~~~~r~~i~-~--~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
. . .+.+|+.+.|.|.+.|.++ +.|+|+|++..|......... . .......|.|......|.|.|+|.|.|.+
T Consensus 100 ~-~-~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~ 177 (202)
T 1vca_A 100 S-G-PLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHI 177 (202)
T ss_dssp S-S-CEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECS
T ss_pred c-e-EEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccc
Confidence 2 3 6789999999999998754 368999999887542110000 0 00113456788888888999999999998
Q ss_pred ce-------EEEEEEEEeecC
Q psy5280 185 GT-------ARQRVSSGNPAQ 198 (202)
Q Consensus 185 G~-------~~~~~~L~V~~~ 198 (202)
|. .+.++.|.|..+
T Consensus 178 ~~~~~~~~~~~~~~~L~V~y~ 198 (202)
T 1vca_A 178 DEMDSVPTVRQAVKELQVYIS 198 (202)
T ss_dssp CCCTTSCSEEEEEEECCEECC
T ss_pred cCCCCcceeEeeEEEEEEecC
Confidence 86 355677776643
No 213
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.26 E-value=3.1e-12 Score=110.97 Aligned_cols=91 Identities=18% Similarity=0.253 Sum_probs=72.3
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-EEcccC---CcEEEEEeeCCeEEEEEccCCCCCCEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-ELIEMG---GRYDSSYTRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-~~l~~~---~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
.+|.+...+.+. .+.+|+++.|.|.+. |.|.|+|++++ ..+... .++.+ ...++|.|.++..+|+|.|+
T Consensus 351 ~~P~i~~~~~~~-~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~----~~~g~L~i~~v~~~D~G~Y~ 423 (452)
T 3zyi_A 351 SAPFIMDAPRDL-NISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISV----LNDGTLNFSHVLLSDTGVYT 423 (452)
T ss_dssp CCCCCSBCCCCE-ECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEE----CTTSCEECSSCCTTCCEEEE
T ss_pred cCcccccccccc-cccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEE----CCCCeEEEeecCHHHCEEEE
Confidence 467777777776 889999999999988 99999999954 444322 24554 34567999999999999999
Q ss_pred EEEEeCCceEEEEEEEEeecCC
Q psy5280 178 ALASNEHGTARQRVSSGNPAQG 199 (202)
Q Consensus 178 C~a~N~~G~~~~~~~L~V~~~~ 199 (202)
|.|.|..|..++++.|.|.+..
T Consensus 424 C~a~N~~G~~~~~~~l~v~~~~ 445 (452)
T 3zyi_A 424 CMVTNVAGNSNASAYLNVSTAG 445 (452)
T ss_dssp EEEECSSCEEEEEEEEEC----
T ss_pred EEEEcCCCcEEEEEEEEEEccc
Confidence 9999999999999999998654
No 214
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.26 E-value=1e-11 Score=104.19 Aligned_cols=92 Identities=15% Similarity=0.208 Sum_probs=73.1
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEe-CCEEcccCCcEEEEEeeCCeEEEEEccCCCCC------CE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYF-NDELIEMGGRYDSSYTRNGQATLFINKMLDRD------VG 174 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k-~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D------~G 174 (202)
.+|.|+..+.+...+.+|+.+.|.|.+.|.|.|.++|+| +|..+....++... ...+.|.|.++..+| +|
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~---~~~~~L~i~~~~~~d~~~~~d~G 78 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQI---SSDGKLVFPPFRAEDYRQEVHAQ 78 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEE---CSTTEEEECCCCGGGCCHHHHEE
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEE---cCCceEEecccChhhccccccCc
Confidence 378999998887678899999999999999999999999 78877654332221 345689999999987 99
Q ss_pred EEEEEEEeCCceEE-EEEEEEee
Q psy5280 175 MYEALASNEHGTAR-QRVSSGNP 196 (202)
Q Consensus 175 ~Y~C~a~N~~G~~~-~~~~L~V~ 196 (202)
.|+|.|.|..|... ..+.|.|.
T Consensus 79 ~Y~C~a~n~~g~~~s~~~~v~v~ 101 (388)
T 2v5m_A 79 VYACLARNQFGSIISRDVHVRAV 101 (388)
T ss_dssp EEEEEEEETTEEEECCCEEEEEE
T ss_pred eEEEEEEccCCeEEecceEEEEc
Confidence 99999999999753 34555543
No 215
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.26 E-value=3.4e-12 Score=103.30 Aligned_cols=130 Identities=8% Similarity=0.004 Sum_probs=88.8
Q ss_pred eeeeecCCCCCeeeecCCCeec---CCCCceeeeccccccCCCCC-CCC-------------CCCeEEeccCCeeEEecC
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPF---HPDKSFYFPRDFDLERPPRE-GYA-------------QAPRFLNQEHDTQYGIKN 119 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~---~p~~~~~~~~~~~ie~~~~~-~~~-------------~~P~fi~~~~~~~~v~~G 119 (202)
..|.+.+ .+.|+++|..+ ......+.+..+..++.|.| |.+ .+|.+...+.+. .+.+|
T Consensus 32 l~C~~~~----~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ng~~~~~~l~V~~~~~~~~~~~~~-~~~~g 106 (290)
T 2o26_X 32 LTCIDPD----FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSNGLTSSIYVFVRDPAKLFLVGLPL-FGKED 106 (290)
T ss_dssp EEEECTT----EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESSSCEEEEEEEEECSSCCBCCCCCE-EEETT
T ss_pred EEECCCC----cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeCCccEEEEEEEeCCCcccccccce-EEecC
Confidence 3355555 78999999875 11223333355555555544 211 233333334444 78899
Q ss_pred CeEEEEEEEEeecC-CceEE-EeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCE-EEEEEEEeCCceEEE-EEEEEe
Q psy5280 120 ENSSLFWFVYGYPK-PKVSF-YFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVG-MYEALASNEHGTARQ-RVSSGN 195 (202)
Q Consensus 120 ~~v~L~C~v~G~P~-P~i~W-~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G-~Y~C~a~N~~G~~~~-~~~L~V 195 (202)
+.+.|.|.+.| |. |.++| .++|..+....++.+ .....|.|.++..+|+| .|+|.|.|..|.... .+.|.|
T Consensus 107 ~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~----~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V 181 (290)
T 2o26_X 107 SDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVP----NPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKV 181 (290)
T ss_dssp SCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEE----ETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceee----CCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEE
Confidence 99999999996 87 89999 578888877666655 33457999999999999 999999999666433 466666
Q ss_pred e
Q psy5280 196 P 196 (202)
Q Consensus 196 ~ 196 (202)
.
T Consensus 182 ~ 182 (290)
T 2o26_X 182 R 182 (290)
T ss_dssp E
T ss_pred E
Confidence 4
No 216
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.26 E-value=1.7e-11 Score=93.99 Aligned_cols=88 Identities=17% Similarity=0.235 Sum_probs=69.1
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEc------------ccCCcEEEEEeeCCeEEEEEccCCCCC
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELI------------EMGGRYDSSYTRNGQATLFINKMLDRD 172 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l------------~~~~r~~i~~~~~~~~~L~I~~~~~~D 172 (202)
.|...+.+. .+.+|+++.|.|.+.|.|.+.+.|++++..+ ....++.+ . ...|.|.++...|
T Consensus 3 ~v~~~~~~~-~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~----~-~~~L~i~~v~~~D 76 (212)
T 1f97_A 3 SVYTAQSDV-QVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTF----S-SSGITFSSVTRKD 76 (212)
T ss_dssp EEECSCSEE-EEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEE----E-TTEEEESCCCGGG
T ss_pred eEEecCCCe-EEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEe----e-ceeEEEcccCccc
Confidence 444455555 8899999999999999999999999987542 22455555 2 2789999999999
Q ss_pred CEEEEEEEEeCCc--eEEEEEEEEeecC
Q psy5280 173 VGMYEALASNEHG--TARQRVSSGNPAQ 198 (202)
Q Consensus 173 ~G~Y~C~a~N~~G--~~~~~~~L~V~~~ 198 (202)
+|.|+|.|.|..| .....+.|.|..+
T Consensus 77 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~ 104 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGEVSIHLTVLVP 104 (212)
T ss_dssp CEEEEEEEEETTSSSEEEEEEEEEEEBC
T ss_pred CeEEEEEEEccCCCcccEEEEEEEEEcC
Confidence 9999999999987 5566777777644
No 217
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.25 E-value=1.8e-11 Score=95.58 Aligned_cols=86 Identities=14% Similarity=0.149 Sum_probs=70.8
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
+..+.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+... ....|.|.++...|+|.|+|.+
T Consensus 16 ~~~~~i~~~p~~~-~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~----------~~~~L~i~~v~~~d~G~Y~C~~ 84 (218)
T 3k0w_A 16 PRGSKITVNPESK-AVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG----------NTSELIFNAVHVKDAGFYVCRV 84 (218)
T ss_dssp ---CCEEECCCCE-EEETTSBEEEECEETTTTSSEEEEEETTEECTTC----------CSSEEEETTCCGGGCEEEEEEE
T ss_pred CCCCEEEECCCCe-EEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC----------CCCEEEEccCChhhCeEeEEEE
Confidence 3478888888888 9999999999999999999999999999887653 2467999999999999999999
Q ss_pred EeCCceE-EEEEEEEeec
Q psy5280 181 SNEHGTA-RQRVSSGNPA 197 (202)
Q Consensus 181 ~N~~G~~-~~~~~L~V~~ 197 (202)
.|..|.. +..+.|.|..
T Consensus 85 ~n~~~~~~s~~~~l~V~~ 102 (218)
T 3k0w_A 85 NNNFTFEFSQWSQLDVCD 102 (218)
T ss_dssp ECTTCCEECCCEEEEEEC
T ss_pred EcCCCCceeeEEEEEEEc
Confidence 9998855 4445666643
No 218
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.24 E-value=1e-10 Score=96.35 Aligned_cols=72 Identities=6% Similarity=-0.086 Sum_probs=53.4
Q ss_pred EEecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 115 YGIKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
.+.+|+.+.|.|.+.|.|.| .++|+|+|..+.............+ ...|.|......|.|.|+|.|.|..|.
T Consensus 128 ~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 128 RATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp CBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred ccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 56789999999999999887 8999999998875432111000001 235778777777789999999999876
No 219
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.23 E-value=4.5e-11 Score=91.79 Aligned_cols=91 Identities=22% Similarity=0.262 Sum_probs=69.0
Q ss_pred CCCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC-----cEEEEEeeCCeEE-----EEEccCCC
Q psy5280 101 AQAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG-----RYDSSYTRNGQAT-----LFINKMLD 170 (202)
Q Consensus 101 ~~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~-----r~~i~~~~~~~~~-----L~I~~~~~ 170 (202)
..+|.|+..+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+.... .... ...+. |.|.++..
T Consensus 7 ~~pp~i~~~p~~~-~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~i~~~~~ 81 (212)
T 2v9r_A 7 DFPPRIVEHPSDL-IVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML----LPSGSLFFLRIVHGRKSR 81 (212)
T ss_dssp CEEEEEEECCCCE-EECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEE----CTTSCEEESSCCCCSSCC
T ss_pred cCCcceecCCCce-EEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEE----ecCCcEEEEEEEecCCCc
Confidence 3478888888887 89999999999999999999999999999886432 1111 11222 33456689
Q ss_pred CCCEEEEEEEEeCCceE-EEEEEEEee
Q psy5280 171 RDVGMYEALASNEHGTA-RQRVSSGNP 196 (202)
Q Consensus 171 ~D~G~Y~C~a~N~~G~~-~~~~~L~V~ 196 (202)
.|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 82 ~d~G~Y~C~~~n~~g~~~~~~~~l~V~ 108 (212)
T 2v9r_A 82 PDEGVYVCVARNYLGEAVSHDASLEVA 108 (212)
T ss_dssp CSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred ccCeEEEEEEECCCCceeecceEEEEE
Confidence 99999999999999876 345555554
No 220
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.23 E-value=1.7e-11 Score=103.62 Aligned_cols=81 Identities=12% Similarity=0.005 Sum_probs=67.6
Q ss_pred CCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccC----CcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 111 HDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMG----GRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 111 ~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~----~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
.+. .+.+|+++.|.|.+.| |.|.|.|++++..+... .++.+ ..++|.|.++..+|+|.|+|.|.|..|.
T Consensus 254 ~~v-~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N~~g~ 326 (361)
T 2xot_A 254 SAW-EAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-----RNGDLFFKKVQVEDGGVYTCYAMGETFN 326 (361)
T ss_dssp CCC-EEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-----ETTEEEESSCCTTSCEEEEEEEECSSCE
T ss_pred cCc-eecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-----ecCeEEEeecCcccCEEEEEEEecCCCc
Confidence 344 8899999999999999 99999999987654332 24554 2357999999999999999999999999
Q ss_pred EEEEEEEEeecC
Q psy5280 187 ARQRVSSGNPAQ 198 (202)
Q Consensus 187 ~~~~~~L~V~~~ 198 (202)
.++.+.|.|...
T Consensus 327 ~~~~~~l~V~~~ 338 (361)
T 2xot_A 327 ETLSVELKVYNF 338 (361)
T ss_dssp EEEEEEEEEESS
T ss_pred cEEEEEEEEEee
Confidence 999999998653
No 221
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.22 E-value=9.9e-11 Score=100.41 Aligned_cols=136 Identities=9% Similarity=-0.018 Sum_probs=91.5
Q ss_pred eeeeecCCCCC---eeeecCCCeecCCCC-------ceeeeccccccCCCCC-CCCC---------------CCeEEe--
Q psy5280 57 TQEKLNPERPK---FEPYLPPGVPFHPDK-------SFYFPRDFDLERPPRE-GYAQ---------------APRFLN-- 108 (202)
Q Consensus 57 ~~~~~~~~~~~---~~~w~~~g~~~~p~~-------~~~~~~~~~ie~~~~~-~~~~---------------~P~fi~-- 108 (202)
..|.+.+.+++ .+.|+|+|.++.... ..+.+.....++.|.| |.+. ++..+.
T Consensus 106 L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~ 185 (450)
T 1z7z_I 106 LRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTF 185 (450)
T ss_dssp EEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEEC
T ss_pred EEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeee
Confidence 44888888877 899999998875421 1233355555555544 2110 221110
Q ss_pred -----ccCC--eeEEecCCeEEEEEEEEee-c--CCceEEEeCCEEcccCCcEEEEEeeCCeEEEE-EccCCCCCCE--E
Q psy5280 109 -----QEHD--TQYGIKNENSSLFWFVYGY-P--KPKVSFYFNDELIEMGGRYDSSYTRNGQATLF-INKMLDRDVG--M 175 (202)
Q Consensus 109 -----~~~~--~~~v~~G~~v~L~C~v~G~-P--~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~-I~~~~~~D~G--~ 175 (202)
.+.. ...+.+|+.+.|.|.+.|. | .+.+.|++++..+.. ++.. ..+...+. ..++..+|+| .
T Consensus 186 ~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--~~~~---~~~~~~~~~~~~v~~~d~G~~~ 260 (450)
T 1z7z_I 186 VLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTY---GNDSFSAKASVSVTAEDEGTQR 260 (450)
T ss_dssp CCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC--EEEE---ETTEEEEEEEEECCGGGCEEEE
T ss_pred ccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--eEEe---cCCceeEEEEEEeEhhhCCcEE
Confidence 1111 0278899999999999999 7 789999999998876 2222 12222221 2277899999 9
Q ss_pred EEEEEEeCCceEEEEEEEEeec
Q psy5280 176 YEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 176 Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
|+|.|.|..|.....+.|.|..
T Consensus 261 Y~C~a~n~~g~~~~~~~l~V~~ 282 (450)
T 1z7z_I 261 LTCAVILGNQSQETLQTVTIYS 282 (450)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEccCCccEEEEEEEEEec
Confidence 9999999999998888888875
No 222
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.22 E-value=2.1e-10 Score=83.66 Aligned_cols=90 Identities=13% Similarity=0.106 Sum_probs=66.3
Q ss_pred ccCCeeEEecCCeEEEEEEEEeecC---CceEEEeCCE--Ecc---------------cCCcEEEEEe--eCCeEEEEEc
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYPK---PKVSFYFNDE--LIE---------------MGGRYDSSYT--RNGQATLFIN 166 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P~---P~i~W~k~g~--~l~---------------~~~r~~i~~~--~~~~~~L~I~ 166 (202)
.+.....+..|+++.|.|.+.+.+. +.+.|++++. .+. -..|+.+... ..+...|.|.
T Consensus 11 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~ 90 (139)
T 1pko_A 11 GPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQ 90 (139)
T ss_dssp CCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEES
T ss_pred CCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEc
Confidence 3333338899999999999987653 6799999864 110 0245554211 1135789999
Q ss_pred cCCCCCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 167 KMLDRDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
++..+|+|.|.|.+.|..|.....+.|.|.++
T Consensus 91 ~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~P 122 (139)
T 1pko_A 91 NVRFSDEGGYTCFFRDHSYQEEAAVELKVEDP 122 (139)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred cCCHHHCEEEEEEEEcCCCceEEEEEEEEecC
Confidence 99999999999999999998888899998865
No 223
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.21 E-value=4.9e-11 Score=92.21 Aligned_cols=72 Identities=11% Similarity=0.200 Sum_probs=52.3
Q ss_pred ecCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEE--EEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 117 IKNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYD--SSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~--i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
.+|+.+.|.|.+.|. |.| .|.|+|+|..+....... ......+ ...|.|..+..+|+|.|+|.|.|......
T Consensus 124 ~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (210)
T 1lk3_L 124 LATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSP 203 (210)
T ss_dssp HTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSC
T ss_pred ccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCe
Confidence 469999999999985 444 799999999886541110 1000011 23799999999999999999999887543
No 224
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.21 E-value=4.9e-11 Score=92.03 Aligned_cols=67 Identities=15% Similarity=-0.001 Sum_probs=49.7
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
.+.+|+++.|.|.+.+ +.+.+.|+|+|..+.................|.|.++. |+|.|+|.|.+..
T Consensus 118 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 118 TVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred ccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 6789999999999886 56899999999876543211110000115689999998 9999999999764
No 225
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.21 E-value=2e-11 Score=93.64 Aligned_cols=89 Identities=8% Similarity=-0.000 Sum_probs=66.7
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
+|.|...+.. .+.+|+++.|.|.+.| |.+.+.|+|++..+........ .......|.|.++..+|+|.|+|.|.|
T Consensus 5 ~P~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 5 KPTLWAEPGS--VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPL--EPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp CCEEEEESCS--EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCC--SSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEccCCC--cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccc--cCCceEEEEeccCCcccCceEEEEEeC
Confidence 5677666554 6789999999999999 7889999999987654211111 113467899999999999999999999
Q ss_pred CCce--EEEEEEEEee
Q psy5280 183 EHGT--ARQRVSSGNP 196 (202)
Q Consensus 183 ~~G~--~~~~~~L~V~ 196 (202)
..|. .+..+.|.|.
T Consensus 80 ~~g~~~~s~~~~l~V~ 95 (196)
T 3p2t_A 80 PVGWSQPSDPLELVMT 95 (196)
T ss_dssp TTEEBCCCCCEEEEEE
T ss_pred CCcccCCCccEEEEec
Confidence 9983 3445566654
No 226
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.21 E-value=7.6e-11 Score=83.33 Aligned_cols=84 Identities=17% Similarity=0.289 Sum_probs=63.4
Q ss_pred EEecCCeEEEEEEEEeecCC----ceEEEeCC-------EEc--------------ccCCcEEEEEe--eCCeEEEEEcc
Q psy5280 115 YGIKNENSSLFWFVYGYPKP----KVSFYFND-------ELI--------------EMGGRYDSSYT--RNGQATLFINK 167 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P----~i~W~k~g-------~~l--------------~~~~r~~i~~~--~~~~~~L~I~~ 167 (202)
.+.+|+++.|.|.+.+.+.+ .+.|++++ ..+ ....|+.+... .....+|.|.+
T Consensus 16 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 95 (126)
T 1eaj_A 16 EKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTN 95 (126)
T ss_dssp EEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEECS
T ss_pred EEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEECc
Confidence 88999999999999987764 49999864 222 01244554110 01236799999
Q ss_pred CCCCCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 168 MLDRDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
+..+|+|.|.|.+.|..|.....+.|.|..+
T Consensus 96 v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~p 126 (126)
T 1eaj_A 96 LQLSDIGTYQCKVKKAPGVANKKIHLVVLVK 126 (126)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred CChHHCeEEEEEEEcCCccCCcEEEEEEEcC
Confidence 9999999999999999999889999998753
No 227
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.20 E-value=3.8e-11 Score=96.80 Aligned_cols=131 Identities=11% Similarity=0.018 Sum_probs=87.8
Q ss_pred eeeeecCCCCCeeeecCCCeec---CCC--CceeeeccccccCCCCC-CCC----------------CCCe-EEeccCCe
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPF---HPD--KSFYFPRDFDLERPPRE-GYA----------------QAPR-FLNQEHDT 113 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~---~p~--~~~~~~~~~~ie~~~~~-~~~----------------~~P~-fi~~~~~~ 113 (202)
..|.+.+. +.|++++... ... .+.+.+..+..++.|.| |.+ .+|. ++..+.+.
T Consensus 24 L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~ 99 (292)
T 4dkd_C 24 LRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEV 99 (292)
T ss_dssp EEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEE
T ss_pred EEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeE
Confidence 34666653 7899876531 111 12333455555666654 211 2232 34444444
Q ss_pred eEEecCCeEEEEEEEEeecC--CceEEEeC-CEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE-
Q psy5280 114 QYGIKNENSSLFWFVYGYPK--PKVSFYFN-DELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ- 189 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P~--P~i~W~k~-g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~- 189 (202)
.+.+|+.+.|.|.+.| |. |.++|+++ +..+....++.+ .....|.|.++...|+|.|+|.|.|..|....
T Consensus 100 -~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~ 173 (292)
T 4dkd_C 100 -VVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSF----SPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSI 173 (292)
T ss_dssp -EEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEEC----CSSSCCEETTCCGGGCSEEEEEECSTTSCEECC
T ss_pred -EEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccc----cCCceEEECCCCHHHCeEEEEEEEeCCCceeEE
Confidence 8889999999999998 65 78999997 566655555554 33455999999999999999999999886643
Q ss_pred EEEEEeec
Q psy5280 190 RVSSGNPA 197 (202)
Q Consensus 190 ~~~L~V~~ 197 (202)
.+.|.|..
T Consensus 174 ~~~l~V~~ 181 (292)
T 4dkd_C 174 SIRLKVQK 181 (292)
T ss_dssp CEEEEEEC
T ss_pred EEEEEEeC
Confidence 67777764
No 228
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.20 E-value=5.8e-11 Score=91.75 Aligned_cols=90 Identities=12% Similarity=0.093 Sum_probs=66.7
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEEEEccCC
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--E---LIE---------MGGRYDSSYTRNGQATLFINKML 169 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L~I~~~~ 169 (202)
|.+...+.+. .+.+|+++.|.|.+.|.|.|.+.|+|+. . .+. ...++.+. .......|.|.++.
T Consensus 2 ~~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~ 79 (213)
T 3nl4_L 2 VVMTQTPASV-SEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGS-GSGTDFTLTISDLE 79 (213)
T ss_dssp CCEEEECSEE-EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEECSCC
T ss_pred ccEEeCCCeE-EEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEe-cCCCEEEEEECCCC
Confidence 3455556666 8999999999999999999999999842 1 111 13566663 33456789999999
Q ss_pred CCCCEEEEEEEEeCCc---eEEEEEEEEe
Q psy5280 170 DRDVGMYEALASNEHG---TARQRVSSGN 195 (202)
Q Consensus 170 ~~D~G~Y~C~a~N~~G---~~~~~~~L~V 195 (202)
.+|+|.|.|.|.|..+ .....+.|.|
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V 108 (213)
T 3nl4_L 80 CADAATYYCQSTYENPTYVSFGGGTEVGV 108 (213)
T ss_dssp GGGCEEEEEEECCSSTTTCEECCCEEEEE
T ss_pred hHHCEEEEEecCCCCceeEEeCCCeEEEE
Confidence 9999999999999877 3333445555
No 229
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.20 E-value=2.1e-11 Score=92.69 Aligned_cols=80 Identities=15% Similarity=0.194 Sum_probs=63.5
Q ss_pred EEecCCeEEEEEEEEe--ecCCceEEEeCCEEcc----------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 115 YGIKNENSSLFWFVYG--YPKPKVSFYFNDELIE----------MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G--~P~P~i~W~k~g~~l~----------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
.+.+|+++.|.|...+ .|.|.|.|+|++..+. ...|+.+ ..++.|.|.++..+|+|.|+|.|.|
T Consensus 7 ~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~----~~~gsL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 7 WGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI----LANGDLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE----CTTSCEEESSCCGGGCEEEEEEEEE
T ss_pred EEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE----CCCCcEEEcccccccCEEEEEEEEe
Confidence 6789999999995433 5567899999997553 3456666 3445699999999999999999999
Q ss_pred CCceE--EEEEEEEeecC
Q psy5280 183 EHGTA--RQRVSSGNPAQ 198 (202)
Q Consensus 183 ~~G~~--~~~~~L~V~~~ 198 (202)
..|.. +..+.|.|..+
T Consensus 83 ~~g~~~~~~~~~l~V~~~ 100 (176)
T 1hng_A 83 TNGTRILNKALDLRILEM 100 (176)
T ss_dssp TTCCEEEEEEEEEEEECC
T ss_pred CCCCEEEEEEEEEEEeCC
Confidence 99987 66677877653
No 230
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.20 E-value=1.4e-10 Score=81.09 Aligned_cols=89 Identities=15% Similarity=0.097 Sum_probs=63.7
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCCCC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKMLDR 171 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~ 171 (202)
++..+.+. .+.+|+++.|.|.+.+.|.+.+.|+|+. ..+. ...|+.+.. ......|.|.++..+
T Consensus 4 v~q~p~~~-~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~ 81 (108)
T 1jhl_L 4 LTQSPSYL-VASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSG-SGTDFTLTISSLEPE 81 (108)
T ss_dssp EEEECSEE-EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-SSSEEEEEECSCCTT
T ss_pred eeccCCee-EEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEe-cCCEEEEEECCCCHH
Confidence 34445555 8899999999999999999999999853 1121 135666632 334578999999999
Q ss_pred CCEEEEEEEEeCCceE-EEEEEEEee
Q psy5280 172 DVGMYEALASNEHGTA-RQRVSSGNP 196 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~-~~~~~L~V~ 196 (202)
|+|.|.|.+.|..... .....|.|.
T Consensus 82 DsG~Y~C~~~n~~~~~fg~gt~L~V~ 107 (108)
T 1jhl_L 82 DFAMYICQQHNEYPWTFGGGTKLEIK 107 (108)
T ss_dssp CCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred HCEEEEEEEccCCccEECCCEEEEEE
Confidence 9999999999974321 223455553
No 231
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.20 E-value=8.3e-11 Score=94.62 Aligned_cols=131 Identities=11% Similarity=0.004 Sum_probs=90.1
Q ss_pred eeeeecCCCCCeeeecCCCeecC-----CCCceeeeccccccCCCCC-CC----------------CCCCe-EEeccCCe
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFH-----PDKSFYFPRDFDLERPPRE-GY----------------AQAPR-FLNQEHDT 113 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~-----p~~~~~~~~~~~ie~~~~~-~~----------------~~~P~-fi~~~~~~ 113 (202)
..|.+.+ .+.|++++.... .....+....+..++.|.| |. ..+|. |+..+...
T Consensus 24 L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~ 99 (289)
T 3ejj_X 24 LRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEV 99 (289)
T ss_dssp EEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEE
T ss_pred EEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceE
Confidence 3465555 378998875421 1222333355555555544 21 12233 45555444
Q ss_pred eEEecCCeEEEEEEEEeecCCc-eEEEe-CCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE-eCCceEEEE
Q psy5280 114 QYGIKNENSSLFWFVYGYPKPK-VSFYF-NDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS-NEHGTARQR 190 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P~P~-i~W~k-~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~-N~~G~~~~~ 190 (202)
.+.+|+++.|.|.+.|.|.+. +.|++ ++..+....++.+ .....|.|.++..+|+|.|+|.|. |..+..+..
T Consensus 100 -~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~ 174 (289)
T 3ejj_X 100 -TVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFF----SPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTG 174 (289)
T ss_dssp -EEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEE----ETTTEEEESSCCGGGCEEEEEEEEETTEEEECCC
T ss_pred -EEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEE----CCCCCEEEeecccccCEEEEEEEEeCCCcccccc
Confidence 889999999999999988876 99985 7788877777766 345679999999999999999999 555666666
Q ss_pred EEEEee
Q psy5280 191 VSSGNP 196 (202)
Q Consensus 191 ~~L~V~ 196 (202)
+.|.|.
T Consensus 175 ~~l~V~ 180 (289)
T 3ejj_X 175 IWLKVN 180 (289)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777776
No 232
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.19 E-value=9.5e-11 Score=82.23 Aligned_cols=89 Identities=15% Similarity=0.124 Sum_probs=64.3
Q ss_pred ccCCeeEEecCCeEEEEEEEE-eecCCc----eEEEeCCEE-------------cccCCcEEEEEee--C--CeEEEEEc
Q psy5280 109 QEHDTQYGIKNENSSLFWFVY-GYPKPK----VSFYFNDEL-------------IEMGGRYDSSYTR--N--GQATLFIN 166 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~-G~P~P~----i~W~k~g~~-------------l~~~~r~~i~~~~--~--~~~~L~I~ 166 (202)
.+.+. .+.+|+++.|.|.+. +.+.+. +.|+|++.. +....|+.+.... . ...+|.|.
T Consensus 6 ~p~~v-~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~ 84 (118)
T 3udw_C 6 APTQV-PGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMF 84 (118)
T ss_dssp CCSEE-EEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEEC
T ss_pred CCCeE-EEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEe
Confidence 34443 889999999999994 555555 999998522 1113444441100 0 15689999
Q ss_pred cCCCCCCEEEEEEEEe-CCceEEEEEEEEeecC
Q psy5280 167 KMLDRDVGMYEALASN-EHGTARQRVSSGNPAQ 198 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N-~~G~~~~~~~L~V~~~ 198 (202)
++..+|+|.|.|.+.| ..|.....+.|.|.++
T Consensus 85 ~v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~ 117 (118)
T 3udw_C 85 GLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAK 117 (118)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred ecChHHCeEEEEEEEECCCCCccceEEEEEEeC
Confidence 9999999999999999 8888888999998764
No 233
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.19 E-value=1.8e-10 Score=90.89 Aligned_cols=88 Identities=15% Similarity=0.043 Sum_probs=70.2
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
+..+..+.....+..|+++.|.|.+ |.|.| .|+|.+.+..+ .+... ......|.|.++..+|+|.|.|.|.
T Consensus 7 ~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~---~~~~~~L~I~~v~~~d~G~Y~C~a~ 79 (210)
T 1gsm_A 7 PLQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQS---DTGRSVLTVRNASLSAAGTRVCVGS 79 (210)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEE---ESSEEEEEECSCCGGGCEEEEEEEE
T ss_pred CEEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEe---cCCccEEEECccCcccCceEEEEEE
Confidence 4445555543488999999999999 99999 99999865433 22222 2557889999999999999999999
Q ss_pred eCCceEEEEEEEEeecC
Q psy5280 182 NEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 182 N~~G~~~~~~~L~V~~~ 198 (202)
|..|.....+.|.|.++
T Consensus 80 n~~~~~~~~~~ltV~~~ 96 (210)
T 1gsm_A 80 CGGRTFQHTVQLLVYAF 96 (210)
T ss_dssp ETTEEEEEEEEEEEEBC
T ss_pred eCCCceEEEEEEEEEec
Confidence 99999888999998865
No 234
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.19 E-value=1e-10 Score=89.92 Aligned_cols=79 Identities=23% Similarity=0.224 Sum_probs=66.6
Q ss_pred ecCCeEEEEEEEEee-cCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEe
Q psy5280 117 IKNENSSLFWFVYGY-PKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSGN 195 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~-P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V 195 (202)
-.++.+.|.|.+.|. |.|.++|+|++..+..+.++.+.. ......|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v 93 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGV-TGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG 93 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEE-ETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEE-eCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEE
Confidence 367888999999885 588999999999999888887633 344678999999999999999999999999888777754
Q ss_pred e
Q psy5280 196 P 196 (202)
Q Consensus 196 ~ 196 (202)
.
T Consensus 94 ~ 94 (212)
T 2r15_A 94 Q 94 (212)
T ss_dssp H
T ss_pred e
Confidence 3
No 235
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.19 E-value=8.9e-12 Score=99.57 Aligned_cols=82 Identities=12% Similarity=0.097 Sum_probs=61.5
Q ss_pred EEecCCeEEEEEEE---EeecCCceEEEeC-CEEccc-----------------C----CcEEEEE-eeCCeEEEEEccC
Q psy5280 115 YGIKNENSSLFWFV---YGYPKPKVSFYFN-DELIEM-----------------G----GRYDSSY-TRNGQATLFINKM 168 (202)
Q Consensus 115 ~v~~G~~v~L~C~v---~G~P~P~i~W~k~-g~~l~~-----------------~----~r~~i~~-~~~~~~~L~I~~~ 168 (202)
.+.+|+++.|.|.+ .|.|.|.+.|+++ +..+.. . .++.+.. .......|.|.++
T Consensus 129 ~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v 208 (268)
T 3mj6_A 129 RVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTV 208 (268)
T ss_dssp EEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSC
T ss_pred ccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcC
Confidence 78899999999999 5779999999994 321110 0 1111100 0023568999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEee
Q psy5280 169 LDRDVGMYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 209 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 236 (268)
T 3mj6_A 209 KESDQGIYTCSIYVGKLESRKTIVLHVV 236 (268)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ChhhCeEEEEEEEcCCceEEEEEEEEEE
Confidence 9999999999999999999999999884
No 236
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.18 E-value=7.6e-11 Score=91.07 Aligned_cols=83 Identities=12% Similarity=0.007 Sum_probs=64.3
Q ss_pred CeeEEecCCeEEEEEEEEeecCCceEEEeC--CEEcc------------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEE
Q psy5280 112 DTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DELIE------------MGGRYDSSYTRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 112 ~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~l~------------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
.. .+.+|+++.|.|.+.|.|.+.+.|+|. +..+. ...++.+.. ......|.|.++..+|+|.|.
T Consensus 9 ~~-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~ 86 (213)
T 3mj8_L 9 LV-SVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN-SGNMATLTISKAQAGDEADYY 86 (213)
T ss_dssp EE-EEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEESSCCGGGCEEEE
T ss_pred cE-EEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe-cCCEEEEEECCCChhhCEEEE
Confidence 44 889999999999999999999999982 21110 234666533 356788999999999999999
Q ss_pred EEEEeCCc---eEEEEEEEEee
Q psy5280 178 ALASNEHG---TARQRVSSGNP 196 (202)
Q Consensus 178 C~a~N~~G---~~~~~~~L~V~ 196 (202)
|.|.|..| .....+.|.|.
T Consensus 87 C~~~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 87 CQSWDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp EEEEETTTTEEEEBCCEEEEEE
T ss_pred EEeccCCcceeEEcCceEEEEe
Confidence 99999998 44455666665
No 237
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.18 E-value=1.5e-10 Score=82.66 Aligned_cols=86 Identities=15% Similarity=0.129 Sum_probs=66.3
Q ss_pred eccCCeeEEecCCeEEEEEEEEe--ecCCceEEEeCCEEccc-------------CCcEEEEEeeCCeEEEEEccCCCCC
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYG--YPKPKVSFYFNDELIEM-------------GGRYDSSYTRNGQATLFINKMLDRD 172 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G--~P~P~i~W~k~g~~l~~-------------~~r~~i~~~~~~~~~L~I~~~~~~D 172 (202)
..+.+. .+..|+++.|.|.+.+ .+.+.|.|+|++..+.. ..|+.+ ..+..|.|.++..+|
T Consensus 8 ~~~~~v-~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~----~~~~sL~I~~v~~~D 82 (117)
T 3q0h_A 8 ETTGNI-SAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAP----GPGLGLTLQSLTVND 82 (117)
T ss_dssp EESCCE-EEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEE----CSTTCEEECSCCGGG
T ss_pred EccCCE-EEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEe----CCceEEEEeeCChhh
Confidence 344555 8899999999999987 33457999998754321 245554 335689999999999
Q ss_pred CEEEEEEEE-eCCceEEEEEEEEeecC
Q psy5280 173 VGMYEALAS-NEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 173 ~G~Y~C~a~-N~~G~~~~~~~L~V~~~ 198 (202)
+|.|.|.+. +..|.....+.|.|.++
T Consensus 83 ~G~Y~C~v~~~~~g~~~~~~~L~V~~p 109 (117)
T 3q0h_A 83 TGEYFCIYHTYPDGTYTGRIFLEVLES 109 (117)
T ss_dssp CEEEEEEEEEETTCCEEEEEEEEEECC
T ss_pred CEEEEEEEEECCCCCeEEEEEEEEEcc
Confidence 999999864 56788888999999876
No 238
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.18 E-value=3.9e-11 Score=92.93 Aligned_cols=75 Identities=16% Similarity=0.219 Sum_probs=51.8
Q ss_pred ecCCeEEEEEEEEe-ecCC-ceEEEeCCEEcccCCcE-EEEEeeCC---eEEEEEccCCCCCCEEEEEEEEeCCceEEEE
Q psy5280 117 IKNENSSLFWFVYG-YPKP-KVSFYFNDELIEMGGRY-DSSYTRNG---QATLFINKMLDRDVGMYEALASNEHGTARQR 190 (202)
Q Consensus 117 ~~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~~~~r~-~i~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~ 190 (202)
..|+.+.|.|.+.| .|.| .++|+|+|..+...... ........ ...|.|......|.|.|+|.|.|..|....+
T Consensus 134 ~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 134 LKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred ccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 45789999999999 5777 89999999988652211 00000000 2348888888889999999999999877655
Q ss_pred E
Q psy5280 191 V 191 (202)
Q Consensus 191 ~ 191 (202)
+
T Consensus 214 ~ 214 (218)
T 3s96_B 214 L 214 (218)
T ss_dssp E
T ss_pred c
Confidence 4
No 239
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.18 E-value=1.2e-10 Score=93.29 Aligned_cols=132 Identities=11% Similarity=0.008 Sum_probs=84.1
Q ss_pred eeeeecCCCCCeeeecCCCeecCC---------CCceeeeccccccCCCCC-CCC---------------------CCCe
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFHP---------DKSFYFPRDFDLERPPRE-GYA---------------------QAPR 105 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~p---------~~~~~~~~~~~ie~~~~~-~~~---------------------~~P~ 105 (202)
..|...+ .+..+.|+|+|..+.. ....+.+..+..++.|.| |.. .+|.
T Consensus 26 L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~ 104 (242)
T 1p6f_A 26 ICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPT 104 (242)
T ss_dssp EEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCE
T ss_pred EEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCc
Confidence 3455543 3457889999976421 112233344445555543 210 1344
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC-
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH- 184 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~- 184 (202)
+...+ +. .+.+|+++.|.|.+.+. .+.+.|+|+|..+... . ........|.|.++..+|+|.|.|.|.|..
T Consensus 105 i~~~p-~~-~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~----~-~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~ 176 (242)
T 1p6f_A 105 LSVHP-GP-EVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ----R-GYGKVQAEFPLGPVTTAHRGTYRCFGSYNNH 176 (242)
T ss_dssp EEEES-CS-EEETTCEEEEEEECTTS-CSEEEEEECSSSCEEE----E-EECSSEEEEEEEECCGGGCEEEEEEEEEETT
T ss_pred eEccC-CC-ccCCCCcEEEEEecCCC-CCEEEEEECCCccCcc----c-cCCCceEEEEeCCCccccCEEEEEEEECCCC
Confidence 44333 33 67899999999998764 4689999998765431 1 112456789999999999999999999874
Q ss_pred --ceEEEEEEEEeec
Q psy5280 185 --GTARQRVSSGNPA 197 (202)
Q Consensus 185 --G~~~~~~~L~V~~ 197 (202)
...+..+.|.|..
T Consensus 177 ~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 177 AWSFPSEPVKLLVTG 191 (242)
T ss_dssp EECCCCCCEEEEEEC
T ss_pred cccCCCCCEEEEEec
Confidence 1234456666664
No 240
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.17 E-value=6.8e-11 Score=91.31 Aligned_cols=89 Identities=13% Similarity=0.163 Sum_probs=60.6
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCCEEcccCCcEE-EEEeeCC----eEEEEEccCCCCCCEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFNDELIEMGGRYD-SSYTRNG----QATLFINKMLDRDVGM 175 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g~~l~~~~r~~-i~~~~~~----~~~L~I~~~~~~D~G~ 175 (202)
+|.+...+.+. .+.+|+.+.|.|.+.|.+ .+.+.|+|+|..+....... ......+ ...|.|..+...|.|.
T Consensus 111 ~P~v~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ 189 (211)
T 3tv3_L 111 APSVTLFPPSS-EELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRS 189 (211)
T ss_dssp CCEEEEECCCH-HHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSC
T ss_pred CCeeEecCCch-hhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCe
Confidence 44444333333 334699999999999974 47899999999886421100 0000011 2568899998899999
Q ss_pred EEEEEEeCCceEEEEEE
Q psy5280 176 YEALASNEHGTARQRVS 192 (202)
Q Consensus 176 Y~C~a~N~~G~~~~~~~ 192 (202)
|+|.|.|..|....++.
T Consensus 190 Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 190 YSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp EEEEEEETTEEEEEEEC
T ss_pred EEEEEEECCCCEEeecc
Confidence 99999999988776654
No 241
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.17 E-value=1.1e-10 Score=92.86 Aligned_cols=71 Identities=14% Similarity=0.198 Sum_probs=51.8
Q ss_pred ecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCc--EEEEEeeC----CeEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 117 IKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGR--YDSSYTRN----GQATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r--~~i~~~~~----~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
..|+.+.|.|.+.|.+++ .++|+|+|..+..... ........ ..+.|.|..+..+|+|.|+|.|.|.....
T Consensus 167 ~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 167 LTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred ccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 358899999999996544 5999999988765411 11100000 13579999999999999999999998764
No 242
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.17 E-value=2.3e-11 Score=101.82 Aligned_cols=129 Identities=10% Similarity=-0.001 Sum_probs=87.8
Q ss_pred eeeeecCCCCCeeeecCCCeecC----------------C-----------CCceeeeccccccCCCCC-CCCCCC----
Q psy5280 57 TQEKLNPERPKFEPYLPPGVPFH----------------P-----------DKSFYFPRDFDLERPPRE-GYAQAP---- 104 (202)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~g~~~~----------------p-----------~~~~~~~~~~~ie~~~~~-~~~~~P---- 104 (202)
..|.+.+.+.+.+.|+++|..+. . ....+.+..+..++.|.| |.+.-.
T Consensus 14 L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~ 93 (363)
T 1wio_A 14 LTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEV 93 (363)
T ss_dssp ECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEEEEETTEEEEE
T ss_pred EEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEEEEEEECCCcE
Confidence 45777788888999999985311 0 011122344555555554 322110
Q ss_pred -eE---EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 105 -RF---LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 105 -~f---i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.. +...... .+.+|+++.|.|.+.|.|.|.++|++++..+ . .....|.|.++..+|+|.|+|.|
T Consensus 94 ~l~V~~~~~~~~~-~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~------~-----~~~~~L~i~~v~~~d~G~Y~C~a 161 (363)
T 1wio_A 94 QLLVFGLTANSDT-HLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------I-----QGGKTLSVSQLELQDSGTWTCTV 161 (363)
T ss_dssp EEEEEEEEESSCS-SEESBSCEEEEEECCTTCCCCEEEECSSSCE------E-----EESSEEEECSBCGGGCEECEEEE
T ss_pred EEEEEeCCCCCce-EEecCCCEEEEEEcCCCCCCeEEEEcCCCcc------c-----ccceEEEEeeCChhcCCEEEEEE
Confidence 00 1112223 5789999999999999999999999987432 1 12468999999999999999999
Q ss_pred EeCCceEEEEEEEEeec
Q psy5280 181 SNEHGTARQRVSSGNPA 197 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~ 197 (202)
.|..+.....+.|.|..
T Consensus 162 ~~~~~~~~~~~~l~v~~ 178 (363)
T 1wio_A 162 LQNQKKVEFKIDIVVLA 178 (363)
T ss_dssp EETTEEEEECCEECEEC
T ss_pred ecCCCeEEEEEEEEEec
Confidence 99988887777777653
No 243
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.16 E-value=8.8e-11 Score=93.02 Aligned_cols=82 Identities=12% Similarity=0.172 Sum_probs=49.0
Q ss_pred EEecCCeEEEEEEEEe-ecCC-ceEEEeCCEEcccC------Cc-EEEEEeeCC----eEEEEEccCCCCCCEEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYG-YPKP-KVSFYFNDELIEMG------GR-YDSSYTRNG----QATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~~~------~r-~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+..|+.+.|.|.+.| .|.| .|+|+|++..+... .. ........+ ...|.|......|.|.|+|.|.
T Consensus 129 ~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~ 208 (248)
T 3pv7_A 129 VGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVR 208 (248)
T ss_dssp -------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEE
T ss_pred ccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEE
Confidence 3456788889999999 8999 99999998643211 00 001001111 3568888888999999999999
Q ss_pred eCCce--EEEEEEEEee
Q psy5280 182 NEHGT--ARQRVSSGNP 196 (202)
Q Consensus 182 N~~G~--~~~~~~L~V~ 196 (202)
|..+. ....+.|.|.
T Consensus 209 n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 209 HASLHTPLRSNFTLTAA 225 (248)
T ss_dssp CTTCSSCEEEEECC---
T ss_pred CCCCCCCcEEEEEEEEc
Confidence 99986 4556666664
No 244
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.16 E-value=1.7e-10 Score=89.11 Aligned_cols=75 Identities=11% Similarity=0.146 Sum_probs=54.2
Q ss_pred ecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEE-EEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 117 IKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYD-SSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~-i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
..|+.+.|.|.+.|.+++ .|+|+|+|..+....... ......+ ...|.|..+..+|.|.|+|.|.|.......
T Consensus 128 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 128 LSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp HTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred ccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 468999999999997544 799999999886542211 0001111 246889999999999999999999876554
Q ss_pred EE
Q psy5280 190 RV 191 (202)
Q Consensus 190 ~~ 191 (202)
++
T Consensus 208 ~v 209 (212)
T 1q0x_L 208 TL 209 (212)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 245
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.16 E-value=1.1e-10 Score=85.50 Aligned_cols=89 Identities=9% Similarity=0.071 Sum_probs=66.0
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CE---Ec-ccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DE---LI-EMGGRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~---~l-~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
.++..+... .+.+|+++.|.|.+.+. +.+.|+|+ +. .+ ....|+.+.. ......|.|.++..+|+|.|.|
T Consensus 19 ~v~q~p~~~-~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~-~~~~~~L~I~~~~~~DsG~Y~C 94 (133)
T 3khq_A 19 QIWQHPRFA-AKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQ-NGSVYTLTIQNIQYEDNGIYFC 94 (133)
T ss_dssp SEEEECSEE-EECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEE-ETTEEEEEECSCCGGGCEEEEE
T ss_pred ceEEcCceE-EEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEc-CCCEEEEEECCCChHHCEEEEE
Confidence 455566666 88999999999999987 89999997 32 22 2456777743 3456789999999999999999
Q ss_pred EEEeCCce----EEEEEEEEeec
Q psy5280 179 LASNEHGT----ARQRVSSGNPA 197 (202)
Q Consensus 179 ~a~N~~G~----~~~~~~L~V~~ 197 (202)
.+.|..|. ....+.|.|..
T Consensus 95 ~a~n~~g~~~~~~g~gt~L~V~~ 117 (133)
T 3khq_A 95 KQKCDSANHNVTDSCGTELLVLG 117 (133)
T ss_dssp EESSCC-------CCCEEEEEC-
T ss_pred EEEeCCCCcceeECCCEEEEEEe
Confidence 99998763 23446677654
No 246
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.15 E-value=6.7e-11 Score=92.01 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=64.5
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCc-eEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPK-VSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~-i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.|.+...+.+. .+.+|+++.|.|.+.|.|.|. +.|+|++..+... ...|.|.++..+|+|.|+|.|.
T Consensus 7 ~p~i~~~p~~~-~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~-----------~~~L~i~~v~~~D~G~Y~C~a~ 74 (204)
T 3sgj_C 7 KAVVFLEPQWY-RVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ-----------ASSYFIDAATVDDSGEYRCQTQ 74 (204)
T ss_dssp BCEEEEESCCS-EEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC-----------SSEEEESSCCGGGCEEEEEEET
T ss_pred CCeEEEcCCCe-EEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC-----------ccEEEEecccccCCEEEEEEeC
Confidence 46666667666 889999999999999999886 9999999887543 2679999999999999999999
Q ss_pred eCCceEEEEEEEEee
Q psy5280 182 NEHGTARQRVSSGNP 196 (202)
Q Consensus 182 N~~G~~~~~~~L~V~ 196 (202)
|...+. .+.|.|.
T Consensus 75 n~~~s~--~~~l~V~ 87 (204)
T 3sgj_C 75 LSTLSD--PVQLEVH 87 (204)
T ss_dssp TSBCCC--CEEEEEE
T ss_pred CCcccc--cEEEEEe
Confidence 864443 4455544
No 247
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.15 E-value=2.2e-10 Score=88.62 Aligned_cols=89 Identities=9% Similarity=0.066 Sum_probs=65.0
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEee-cCCceEEEeCC---E--Ec----------c---cCCcEEEEEeeCCeEEEEE
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGY-PKPKVSFYFND---E--LI----------E---MGGRYDSSYTRNGQATLFI 165 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~-P~P~i~W~k~g---~--~l----------~---~~~r~~i~~~~~~~~~L~I 165 (202)
.+...+ .. .+.+|+++.|.|.+.|. |.+.+.|+|.. . .+ . ...|+.+.. ......|.|
T Consensus 3 ~v~~~p-~~-~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I 79 (218)
T 3s96_B 3 VLTQSS-SA-SFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-SGADRYLSI 79 (218)
T ss_dssp SEECCS-EE-EEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE-ETTEEEEEE
T ss_pred eEEeCC-cE-EECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec-CCceEEEEE
Confidence 344444 44 88999999999999999 99999999831 1 00 0 123666533 355678999
Q ss_pred ccCCCCCCEEEEEEEEeCCc-----eEEEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNEHG-----TARQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G-----~~~~~~~L~V~ 196 (202)
.++..+|+|.|.|.|.|..| .....+.|.|.
T Consensus 80 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~ 115 (218)
T 3s96_B 80 SNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVL 115 (218)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEE
T ss_pred ccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEe
Confidence 99999999999999999887 33334566665
No 248
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.14 E-value=8e-11 Score=90.45 Aligned_cols=80 Identities=6% Similarity=-0.130 Sum_probs=53.8
Q ss_pred EEecCCeEEEEEE-EEeecCCceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 115 YGIKNENSSLFWF-VYGYPKPKVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 115 ~v~~G~~v~L~C~-v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
....++.+.+.|. +.+.|.|.+.|++++..+........ ...+ .+.|.|..+...|+|.|+|.|.|.+|....
T Consensus 132 ~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~--~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~ 209 (225)
T 4fmk_A 132 TIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPG--IQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPI 209 (225)
T ss_dssp CCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEEEC--SSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCE
T ss_pred eecceeeeeeeeeecCCCCCCEEEEEECCccccCCcceEE--ecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEE
Confidence 3445666666665 45678889999998765443221111 0011 246999999999999999999999987655
Q ss_pred EEEEEee
Q psy5280 190 RVSSGNP 196 (202)
Q Consensus 190 ~~~L~V~ 196 (202)
.+.+++.
T Consensus 210 ~~~v~l~ 216 (225)
T 4fmk_A 210 LLPVTLS 216 (225)
T ss_dssp EEEEECC
T ss_pred EEEEEEE
Confidence 5544444
No 249
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.14 E-value=2.7e-10 Score=90.06 Aligned_cols=79 Identities=10% Similarity=0.081 Sum_probs=61.6
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEe----------------CCEEcccC---CcEEEEEeeCCeEEEEEc
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYF----------------NDELIEMG---GRYDSSYTRNGQATLFIN 166 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k----------------~g~~l~~~---~r~~i~~~~~~~~~L~I~ 166 (202)
+...+... .+.+|+++.|.|.+.|.|.+.|.|+| ++...... .|+.+.........|.|.
T Consensus 4 v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 4 VSQHPSWV-ISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp EEEECSEE-EEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred cEECCcEE-EEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 44445555 88999999999999999999999999 33333222 577764444556789999
Q ss_pred cCCCCCCEEEEEEEEeCCc
Q psy5280 167 KMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G 185 (202)
++..+|+|.|.|.+.|..+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~ 101 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGD 101 (246)
T ss_dssp SCCGGGCEEEEEEECCSSG
T ss_pred CCCHHHCEEEEEEEecCCC
Confidence 9999999999999998754
No 250
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.14 E-value=2e-10 Score=88.62 Aligned_cols=88 Identities=18% Similarity=0.079 Sum_probs=65.3
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--EEc------------ccCCcEEEEEeeCCeEEEEEccCCCCC
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--ELI------------EMGGRYDSSYTRNGQATLFINKMLDRD 172 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~~l------------~~~~r~~i~~~~~~~~~L~I~~~~~~D 172 (202)
+..+.+. .+.+|+++.|.|.+.|.|.|.|.|+|++ ..+ ....++.+.. ......|.|.++..+|
T Consensus 5 ~~~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 5 TQSPATL-SVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG-SGTDFTLSINSVETED 82 (213)
T ss_dssp EEECSEE-EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGGG
T ss_pred EeCCccE-EEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc-CCCEEEEEECCCChhh
Confidence 3445555 8899999999999999999999999853 211 1125666633 3456799999999999
Q ss_pred CEEEEEEEEeCCceEEE-EEEEEee
Q psy5280 173 VGMYEALASNEHGTARQ-RVSSGNP 196 (202)
Q Consensus 173 ~G~Y~C~a~N~~G~~~~-~~~L~V~ 196 (202)
+|.|.|.|.|..|.... .+.|.|.
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~ 107 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEIK 107 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CEEEEEeeecCCcceeCCCEEEEEe
Confidence 99999999999876432 2355554
No 251
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.13 E-value=6e-11 Score=91.07 Aligned_cols=91 Identities=7% Similarity=-0.007 Sum_probs=67.8
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|...+. . .+.+|+++.|.|.+.|.|. .+.|+|++..+....... ........|.|.++..+|+|.|+|.|.
T Consensus 4 ~~P~i~~~p~-~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (196)
T 2d3v_A 4 SKATLWAEPG-S-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNP--LEPKNKARFSIPSMTEHHAGRYRCYYY 78 (196)
T ss_dssp CBCEEEEESC-S-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECC--CSSTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCC-C-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccc--cCCccccEEEeccCChhHCeEEEEEEe
Confidence 3677776665 4 7889999999999998775 899999998765321100 012346789999999999999999999
Q ss_pred eCCceE--EEEEEEEeec
Q psy5280 182 NEHGTA--RQRVSSGNPA 197 (202)
Q Consensus 182 N~~G~~--~~~~~L~V~~ 197 (202)
|..|.. +..+.|.|..
T Consensus 79 n~~g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 79 SPAGWSEPSDPLELVVTG 96 (196)
T ss_dssp ETTEECBCCCCEEEEEEC
T ss_pred CCCCcCCcCccEEEEecC
Confidence 998753 3445666654
No 252
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.13 E-value=1.9e-10 Score=90.03 Aligned_cols=77 Identities=14% Similarity=0.216 Sum_probs=54.5
Q ss_pred ecCCeEEEEEEEEee-c-CCceEEEeCCEEcccCC--cEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 117 IKNENSSLFWFVYGY-P-KPKVSFYFNDELIEMGG--RYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~-P-~P~i~W~k~g~~l~~~~--r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
.+|+.+.|.|.+.|. | .|.++|+|+|..+.... .........+ ...|.|..+..+|.|.|+|.|.|......
T Consensus 148 ~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 148 LKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp HHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred ccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 358899999999995 4 48999999999886431 0000000011 35688999999999999999999987554
Q ss_pred EEEEE
Q psy5280 189 QRVSS 193 (202)
Q Consensus 189 ~~~~L 193 (202)
....+
T Consensus 228 ~~~~~ 232 (237)
T 3sob_L 228 VTKSF 232 (237)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 44443
No 253
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.13 E-value=2.8e-10 Score=87.79 Aligned_cols=73 Identities=15% Similarity=0.202 Sum_probs=51.6
Q ss_pred EecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCC--cEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 116 GIKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGG--RYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~--r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
+..|+.+.|.|.+.|.|+| .++|+|+|..+.... .........+ ...|.|......|.|.|+|.|.|.....
T Consensus 124 ~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 124 QLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp HHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred ecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 3468889999999998754 899999999886531 1101000011 2467888888889999999999987554
Q ss_pred E
Q psy5280 188 R 188 (202)
Q Consensus 188 ~ 188 (202)
.
T Consensus 204 ~ 204 (213)
T 3r06_A 204 A 204 (213)
T ss_dssp C
T ss_pred c
Confidence 3
No 254
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.12 E-value=6.8e-11 Score=93.80 Aligned_cols=76 Identities=13% Similarity=0.111 Sum_probs=56.5
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEEcc-----------------cCCcEEEEEee-CCeEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DELIE-----------------MGGRYDSSYTR-NGQATL 163 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~l~-----------------~~~r~~i~~~~-~~~~~L 163 (202)
++..+... .+.+|+++.|.|.+.|.| .|.+.|+|+ +..+. ...|+.+.... ....+|
T Consensus 134 ~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 212 (250)
T 3esu_F 134 QLQQSGPE-LVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYM 212 (250)
T ss_dssp -CEECCCE-EECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred EEecCCce-EEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEE
Confidence 34445555 788999999999999877 789999997 43221 12566663322 345689
Q ss_pred EEccCCCCCCEEEEEEEEe
Q psy5280 164 FINKMLDRDVGMYEALASN 182 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N 182 (202)
.|.++..+|+|.|.|.|.|
T Consensus 213 ~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 213 QLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EECSCCGGGCEEEEEEEEC
T ss_pred EECCCCcccCEEEEEEEec
Confidence 9999999999999999997
No 255
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.12 E-value=1.9e-10 Score=88.79 Aligned_cols=60 Identities=12% Similarity=0.170 Sum_probs=49.8
Q ss_pred EecCCeEEEEEEEEe-ecCCceEEEeCCEEcccCC------------cEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 116 GIKNENSSLFWFVYG-YPKPKVSFYFNDELIEMGG------------RYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 116 v~~G~~v~L~C~v~G-~P~P~i~W~k~g~~l~~~~------------r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
+.+|+.+.|.|.+.| .|.|.++|+|+|..+.... .+.+ .+.|.|..+...|+|.|+|.|.
T Consensus 126 ~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 126 LVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNL------SSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp HHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEE------EEEEEEEHHHHHTCCEEEEEEE
T ss_pred hccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEE------EEEEEecHHHcCCCCeEEEEEE
Confidence 456999999999999 8999999999999886421 1222 3579999999999999999999
No 256
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.12 E-value=1.1e-11 Score=95.96 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=53.4
Q ss_pred ecCCeEEEEEEEEee-cC-CceEEEeCCEEcccCCcEEEEEeeC----CeEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 117 IKNENSSLFWFVYGY-PK-PKVSFYFNDELIEMGGRYDSSYTRN----GQATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~-P~-P~i~W~k~g~~l~~~~r~~i~~~~~----~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
.+|+.+.|.|.+.|. |. |.++|+|+|..+............. ..+.|.|.++..+|+|.|+|.|.|..+...
T Consensus 126 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (212)
T 1nfd_E 126 LRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVE 203 (212)
T ss_dssp HHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCC
T ss_pred ccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEE
Confidence 469999999999998 54 7999999999886542210000000 024588999999999999999999988643
No 257
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.12 E-value=2.7e-10 Score=87.89 Aligned_cols=90 Identities=9% Similarity=0.077 Sum_probs=65.7
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC---E--Ec---------ccCCcEEEEEeeCCeEEEEEccCC
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND---E--LI---------EMGGRYDSSYTRNGQATLFINKML 169 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g---~--~l---------~~~~r~~i~~~~~~~~~L~I~~~~ 169 (202)
+.+...+... .+.+|+++.|.|.+.|.|.+.+.|+|.. . .+ ....++.+. .......|.|.++.
T Consensus 2 ~~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~ 79 (213)
T 3r06_A 2 IQMTQSPSSL-PASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGS-GSGRDSSFTISSLE 79 (213)
T ss_dssp CCEEEECSEE-EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCC
T ss_pred CeeEeCCCEE-EecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEe-ccCCEEEEEECCCC
Confidence 3455556555 8899999999999999999999999832 1 11 124566663 23456799999999
Q ss_pred CCCCEEEEEEEEeCCceE-EEEEEEEe
Q psy5280 170 DRDVGMYEALASNEHGTA-RQRVSSGN 195 (202)
Q Consensus 170 ~~D~G~Y~C~a~N~~G~~-~~~~~L~V 195 (202)
.+|+|.|.|.|.|..+.. ...+.|.|
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 80 SEDIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp GGGCSEEEEEECSSSSCEECCCEEEEE
T ss_pred cccCEEEEEecccCCceEEcCCceEEE
Confidence 999999999999986532 23345555
No 258
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.11 E-value=5e-11 Score=91.18 Aligned_cols=89 Identities=17% Similarity=0.196 Sum_probs=66.8
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEc------------ccCCcEEEEEeeCCeEEEEEccCCC
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELI------------EMGGRYDSSYTRNGQATLFINKMLD 170 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l------------~~~~r~~i~~~~~~~~~L~I~~~~~ 170 (202)
+..|...+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+ ....++.+ . ...|.|.++..
T Consensus 4 ~~~i~~~~~~~-~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~----~-~~~L~i~~~~~ 77 (209)
T 1nbq_A 4 SVTVHSSEPEV-RIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTF----L-PTGITFKSVTR 77 (209)
T ss_dssp CCEEECSCSBC-CEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEE----E-TTEEECSCCCT
T ss_pred eEEEEcCCCce-EEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEe----e-ccEEEEeeCCH
Confidence 44555555555 8899999999999999999999999987542 12344544 1 26899999999
Q ss_pred CCCEEEEEEEEeCCc--eEEEEEEEEeec
Q psy5280 171 RDVGMYEALASNEHG--TARQRVSSGNPA 197 (202)
Q Consensus 171 ~D~G~Y~C~a~N~~G--~~~~~~~L~V~~ 197 (202)
.|+|.|+|.+.|..| ..+..+.|.|..
T Consensus 78 ~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~ 106 (209)
T 1nbq_A 78 EDTGTYTCMVSEEGGNSYGEVKVKLIVLV 106 (209)
T ss_dssp TSCSEEEEEEEETTSSCEECCEEECCEEB
T ss_pred HHCcEEEEEEecCCCCccceEEEEEEEec
Confidence 999999999999976 334455555543
No 259
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.10 E-value=2.5e-10 Score=87.35 Aligned_cols=85 Identities=16% Similarity=0.235 Sum_probs=66.5
Q ss_pred eEEecCCeEEEEEEEEeec----CCceEEEe----------------CCEEccc-----CCcEEEEE--eeCCeEEEEEc
Q psy5280 114 QYGIKNENSSLFWFVYGYP----KPKVSFYF----------------NDELIEM-----GGRYDSSY--TRNGQATLFIN 166 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P----~P~i~W~k----------------~g~~l~~-----~~r~~i~~--~~~~~~~L~I~ 166 (202)
..+.+|+++.|.|.+.+.| .+.+.|++ ++..+.. ..++.+.. .......|.|.
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~ 89 (214)
T 3jz7_A 10 IEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVT 89 (214)
T ss_dssp EEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEEC
T ss_pred EEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEc
Confidence 3788999999999999988 56999988 4544432 34555411 01135679999
Q ss_pred cCCCCCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 167 KMLDRDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
++..+|+|.|+|.+.|..|.....+.|.|..+
T Consensus 90 ~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~ 121 (214)
T 3jz7_A 90 NLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK 121 (214)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred cCChhhCeEEEEEEEeCCCccccEEEEEEEcC
Confidence 99999999999999999999988899988754
No 260
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.10 E-value=1.8e-11 Score=82.44 Aligned_cols=60 Identities=12% Similarity=0.089 Sum_probs=49.7
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccC-CCCCCEEEEEEEEe
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKM-LDRDVGMYEALASN 182 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~-~~~D~G~Y~C~a~N 182 (202)
+... .+..|+++.|.|.+.|.|. |+|+|||..|..+ .+.+|.|.++ ..+|+|.|+|.|.+
T Consensus 6 p~~~-v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~----------~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYK-VSISGTSVELTCPLDSDEN--LKWEKNGQELPQK----------HDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCE-EEEETTEEEEECSSCCCSS--CEEEETTEECTTC----------CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred Ccee-EEEcCCeEEEEEECCCCCc--EEEEECCEECcCC----------CCCEEEECccCccCcCEEEEEEEcc
Confidence 3344 6778999999999999983 9999999988653 2457999996 77999999999876
No 261
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.10 E-value=1.2e-10 Score=88.78 Aligned_cols=81 Identities=14% Similarity=-0.028 Sum_probs=63.1
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|...+. . .+.+|+++.|.|.+.| |.+.+.|+|++.. .. .....|.|.++..+|+|.|+|.|.
T Consensus 7 ~~P~i~~~p~-~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~-------~~----~~~~~L~i~~v~~~D~G~Y~C~a~ 72 (184)
T 2gi7_A 7 PKPSLQALPS-S-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS-------RY----QDQAVLFIPAMKRSLAGRYRCSYQ 72 (184)
T ss_dssp CCCEEEEESC-S-EEETTCCEEEEEECST-TCSEEEEEETTTC-------CE----ESSSEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEeCCC-c-cccCCCcEEEEEeCCC-CCCEEEEEECCcc-------cc----CcccEEEECcCChhhCceEEEEEE
Confidence 3677765554 4 7889999999999988 8889999999865 11 235689999999999999999999
Q ss_pred eCCceE--EEEEEEEee
Q psy5280 182 NEHGTA--RQRVSSGNP 196 (202)
Q Consensus 182 N~~G~~--~~~~~L~V~ 196 (202)
|..|.. +..+.|.|.
T Consensus 73 n~~g~~~~s~~~~l~V~ 89 (184)
T 2gi7_A 73 NGSLWSLPSDQLELVAT 89 (184)
T ss_dssp ETTEEBCCCCCEEEEEE
T ss_pred cCCCccCCCCCEEEEec
Confidence 988742 334556653
No 262
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.10 E-value=2.1e-10 Score=86.42 Aligned_cols=81 Identities=14% Similarity=0.123 Sum_probs=65.4
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCc-eEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPK-VSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~-i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.+|.+...+... .+.+|+++.|.|.+.|.|.|. +.|+|++..+.. ....|.|.++..+|+|.|+|.+
T Consensus 6 ~~p~i~~~p~~~-~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-----------~~~~L~i~~~~~~d~G~Y~C~~ 73 (175)
T 1fnl_A 6 PKAVVFLEPQWY-SVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-----------QASSYFIDAATVNDSGEYRCQT 73 (175)
T ss_dssp CCCEEEEESCCS-EEETTCCEEEEEECCCBTTBCCCEEEETTEEEES-----------SCSEEEESSCCGGGCEEEEEEC
T ss_pred CCCEEEEcCCce-eeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-----------CceEEEEeCCCcccCEEEEEEe
Confidence 357777777766 889999999999999999887 789999987643 3568999999999999999999
Q ss_pred EeCCceEEEEEEEEee
Q psy5280 181 SNEHGTARQRVSSGNP 196 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~ 196 (202)
.|..++.. +.|.|.
T Consensus 74 ~n~~~s~~--~~l~V~ 87 (175)
T 1fnl_A 74 NLSTLSDP--VQLEVH 87 (175)
T ss_dssp SSSCCCCC--EEEEEE
T ss_pred eCCccccc--EEEEEe
Confidence 99776543 444443
No 263
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.10 E-value=5.4e-10 Score=90.43 Aligned_cols=77 Identities=14% Similarity=0.110 Sum_probs=57.5
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EEc-----------------ccCCcEEEEEee-CCeEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--ELI-----------------EMGGRYDSSYTR-NGQATL 163 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~l-----------------~~~~r~~i~~~~-~~~~~L 163 (202)
++..+.+. .+.+|+++.|.|.+.|.| .|.+.|+|++ ..+ ....++.+.... .....|
T Consensus 137 ~~~~p~~~-~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 215 (276)
T 3auv_A 137 QLVESGGG-LVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYL 215 (276)
T ss_dssp EEEEECCE-EECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEE
T ss_pred EEECCCce-EecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEE
Confidence 34445555 788999999999999987 5899999963 111 113466663321 234689
Q ss_pred EEccCCCCCCEEEEEEEEeC
Q psy5280 164 FINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.|.++..+|+|.|.|.|.|.
T Consensus 216 ~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 216 QMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EECSCCGGGCEEEEEEEECS
T ss_pred EECCCChhHCEEEEEEEEcC
Confidence 99999999999999999998
No 264
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.09 E-value=4.9e-10 Score=91.90 Aligned_cols=76 Identities=9% Similarity=-0.032 Sum_probs=59.0
Q ss_pred EEecC---CeEEEEEE-EEeecCCceEEEeCC--EEcc-----cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 115 YGIKN---ENSSLFWF-VYGYPKPKVSFYFND--ELIE-----MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 115 ~v~~G---~~v~L~C~-v~G~P~P~i~W~k~g--~~l~-----~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.+.+| +.+.|.|. +.|.|.|.++|++++ .... ....+.+ ...|.|..+...|+|.|+|.|.|.
T Consensus 143 ~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~------~~~L~i~~~~~~d~G~Y~C~a~n~ 216 (331)
T 3u83_A 143 RAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTV------ISRYRLVPSREAHQQSLACIVNYH 216 (331)
T ss_dssp EECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEE------EEEEEECCCGGGTTCEEEEEEEET
T ss_pred eecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEE------EEEEEEEeccccCCCEEEEEEecC
Confidence 67778 77999997 899999999999953 2211 1222222 356889999999999999999999
Q ss_pred CceEEEEEEEEee
Q psy5280 184 HGTARQRVSSGNP 196 (202)
Q Consensus 184 ~G~~~~~~~L~V~ 196 (202)
.|..+.++.|.|.
T Consensus 217 ~~~~~~~~~l~V~ 229 (331)
T 3u83_A 217 MDRFKESLTLNVQ 229 (331)
T ss_dssp TEEEEEEEECCEE
T ss_pred CCcceeeEEEEEe
Confidence 9998888777664
No 265
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.09 E-value=8.5e-11 Score=89.94 Aligned_cols=69 Identities=10% Similarity=0.086 Sum_probs=56.9
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEcc-CCCCCCEEEEEEEEeCCceEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINK-MLDRDVGMYEALASNEHGTARQRVSS 193 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~-~~~~D~G~Y~C~a~N~~G~~~~~~~L 193 (202)
....|+++.|.|.+.| |. .|+|+|+|..+..+ .+.+|.|.+ +..+|+|.|+|.|.|..|..+..+.+
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~----------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~ 77 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK----------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKA 77 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC----------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC----------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEE
Confidence 4578999999999988 44 59999999988653 235799999 99999999999999999986655555
Q ss_pred Ee
Q psy5280 194 GN 195 (202)
Q Consensus 194 ~V 195 (202)
.|
T Consensus 78 ~v 79 (186)
T 1jbj_A 78 RV 79 (186)
T ss_dssp CC
T ss_pred EE
Confidence 44
No 266
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.08 E-value=2e-10 Score=97.86 Aligned_cols=74 Identities=18% Similarity=0.222 Sum_probs=55.1
Q ss_pred ecCCeEEEEEEEEe-ecCC-ceEEEeCCEEcccCCcEEEEEe--eCC----eEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 117 IKNENSSLFWFVYG-YPKP-KVSFYFNDELIEMGGRYDSSYT--RNG----QATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 117 ~~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~~~~r~~i~~~--~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
.+|+.+.|.|.+.| .|.| .|+|+|+|..+........... ..+ .+.|.|..+..+|+|.|+|.|.|..|...
T Consensus 129 ~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 208 (438)
T 1qgc_4 129 LTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 208 (438)
T ss_dssp HHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred ccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCc
Confidence 45889999999988 6777 8999999998876511111000 001 35799999999999999999999998753
Q ss_pred EE
Q psy5280 189 QR 190 (202)
Q Consensus 189 ~~ 190 (202)
..
T Consensus 209 ~~ 210 (438)
T 1qgc_4 209 IV 210 (438)
T ss_dssp EE
T ss_pred ee
Confidence 33
No 267
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.08 E-value=3e-10 Score=80.73 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=60.7
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcc-------------------cCCcEEEEEeeCCeEEEEEccCCCCCCEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIE-------------------MGGRYDSSYTRNGQATLFINKMLDRDVGM 175 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~-------------------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~ 175 (202)
.+.+|+++.|.|.....+.+.+.|+|+..... -++|..+ ..+++|.|.++..+|+|.
T Consensus 11 ~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~----~~ngSL~I~nvt~~D~G~ 86 (111)
T 2qsq_A 11 NVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREII----YPNASLLIQNIIQNDAGF 86 (111)
T ss_dssp EEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEE----CTTSCEEECSCCGGGCEE
T ss_pred eeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEE----ecCCcEEEccCcccCCeE
Confidence 67899999999974323334689999753221 1456666 456799999999999999
Q ss_pred EEEEEEeCCc-eEEEEEEEEeec
Q psy5280 176 YEALASNEHG-TARQRVSSGNPA 197 (202)
Q Consensus 176 Y~C~a~N~~G-~~~~~~~L~V~~ 197 (202)
|+|.+.|..+ ...+++.|.|..
T Consensus 87 Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 87 YTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp EEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEEeCCCcEEEEEEEEEEec
Confidence 9999999977 467788888864
No 268
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.08 E-value=5.8e-10 Score=88.20 Aligned_cols=89 Identities=12% Similarity=0.113 Sum_probs=64.6
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEe--CCEEcc------------cCCcEEEEEeeCCeEEEEEccCCCC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYF--NDELIE------------MGGRYDSSYTRNGQATLFINKMLDR 171 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k--~g~~l~------------~~~r~~i~~~~~~~~~L~I~~~~~~ 171 (202)
+...+... .+.+|+++.|.|.+.|.|.|.+.|+| ++..+. ...++.+. ......+|.|.++..+
T Consensus 138 ~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~~ 215 (247)
T 2ghw_B 138 LTQSPATL-SLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGS-GSGTDFTLTISRLEPE 215 (247)
T ss_dssp EEEECSEE-EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-CSSSEEEEEECSCCGG
T ss_pred EEccCCEE-EecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEe-cCCCeEEEEECcCCHH
Confidence 44444444 78899999999999999999999999 554331 13456552 2234568999999999
Q ss_pred CCEEEEEEEEeCCceE-EEEEEEEee
Q psy5280 172 DVGMYEALASNEHGTA-RQRVSSGNP 196 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~-~~~~~L~V~ 196 (202)
|+|.|.|.|.|..+.. ...+.|.|.
T Consensus 216 D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 216 DFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HCEEEEEEEccCCCceEcCCEEEEEC
Confidence 9999999999865433 234566665
No 269
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.08 E-value=6.2e-10 Score=89.03 Aligned_cols=92 Identities=14% Similarity=0.117 Sum_probs=62.7
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--E---Ecc------------cCCcEEEEEeeCCeEEEEEc
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--E---LIE------------MGGRYDSSYTRNGQATLFIN 166 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~---~l~------------~~~r~~i~~~~~~~~~L~I~ 166 (202)
|.+...+... .+.+|+++.|.|.+.+. .|.+.|+|.. . .+. ...++.+.........|.|.
T Consensus 138 ~~v~~~p~~~-~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 215 (256)
T 3tf7_C 138 AAVTQSPRNK-VTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLE 215 (256)
T ss_dssp CCEEESCSEE-EEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEES
T ss_pred cEEEecCCEE-EEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEEC
Confidence 3444444444 77899999999999987 7899999832 1 111 12344442222345689999
Q ss_pred cCCCCCCEEEEEEEEeCCceEEE--EEEEEeec
Q psy5280 167 KMLDRDVGMYEALASNEHGTARQ--RVSSGNPA 197 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G~~~~--~~~L~V~~ 197 (202)
++..+|+|.|.|.|.|..|.... ...|.|..
T Consensus 216 ~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~ 248 (256)
T 3tf7_C 216 SASPSQTSLYFCASSDAPGQLYFGEGSKLTVLE 248 (256)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCCHHHCEEEEEEecCCCCccEECCCeEEEEEc
Confidence 99999999999999998875432 24566553
No 270
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.07 E-value=4.9e-10 Score=86.47 Aligned_cols=85 Identities=12% Similarity=0.016 Sum_probs=63.7
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CEEc------------ccCCcEEEEEeeCCeEEEEEccCCCCCCEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DELI------------EMGGRYDSSYTRNGQATLFINKMLDRDVGM 175 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~l------------~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~ 175 (202)
+.+. .+.+|+++.|.|.+.|.|.|.|.|+|+ +..+ ....++.+.. ......|.|.++..+|+|.
T Consensus 7 p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~ 84 (210)
T 1lk3_L 7 PPAL-TVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG-SGTDFTLTIDPVEADDTAI 84 (210)
T ss_dssp CSEE-EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEE
T ss_pred CCcE-EEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe-cCCEEEEEECCCCHHHCeE
Confidence 5555 889999999999999999999999984 2221 1135666533 3456799999999999999
Q ss_pred EEEEEEeCCceEEE-EEEEEee
Q psy5280 176 YEALASNEHGTARQ-RVSSGNP 196 (202)
Q Consensus 176 Y~C~a~N~~G~~~~-~~~L~V~ 196 (202)
|.|.|.|..|.... .+.|.|.
T Consensus 85 Y~C~~~~~~~~~~~~~~~l~V~ 106 (210)
T 1lk3_L 85 YFCQQSWNGPLTFGAGTKLELK 106 (210)
T ss_dssp EEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEcCCCceeCCCEEEEEc
Confidence 99999998875432 2355554
No 271
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.07 E-value=2.4e-10 Score=87.86 Aligned_cols=80 Identities=18% Similarity=0.149 Sum_probs=64.2
Q ss_pred EEecCCeEEEEEEEEe-ecCCceEEEeCCEEcc---cC---------------CcEEEEEeeCCeEEEEEccCCCCCCEE
Q psy5280 115 YGIKNENSSLFWFVYG-YPKPKVSFYFNDELIE---MG---------------GRYDSSYTRNGQATLFINKMLDRDVGM 175 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G-~P~P~i~W~k~g~~l~---~~---------------~r~~i~~~~~~~~~L~I~~~~~~D~G~ 175 (202)
.+.+|+++.|.|.+.+ .+.+.|.|++++..+. .. .|+.+ ..++.|.|.++..+|+|.
T Consensus 9 ~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~----~~~~sL~I~~v~~~D~G~ 84 (193)
T 2if7_A 9 NGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNF----TQSYSLQLSNLKMEDTGS 84 (193)
T ss_dssp EEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEE----CTTCCEEECSCCGGGCEE
T ss_pred EEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEE----CCCeEEEECCCCcccCce
Confidence 7889999999999876 5567999999986542 10 24444 346789999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEeecC
Q psy5280 176 YEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 176 Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|.|.+.|..|.....+.|.|.++
T Consensus 85 Y~C~~~~~~~~~~~~~~L~V~~~ 107 (193)
T 2if7_A 85 YRAQISTKTSAKLSSYTLRILRQ 107 (193)
T ss_dssp EEEEEECSSCEEEEEEEEEEECC
T ss_pred EEEEEEecCCCeEEEEEEEEEcc
Confidence 99999999998777888887643
No 272
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.07 E-value=1.6e-10 Score=93.62 Aligned_cols=80 Identities=11% Similarity=-0.029 Sum_probs=55.4
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc-----eEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG-----TARQ 189 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G-----~~~~ 189 (202)
.+.+|+++.|.|.+.+.+ +.+.|+|+|..+....+............|.|.++. |+|.|+|.|.|... ..+.
T Consensus 117 ~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~ 193 (257)
T 1b6u_A 117 TVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSD 193 (257)
T ss_dssp TCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCC
T ss_pred ccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCC
Confidence 567899999999998764 789999999776543221110001125789999998 99999999997632 2233
Q ss_pred EEEEEeec
Q psy5280 190 RVSSGNPA 197 (202)
Q Consensus 190 ~~~L~V~~ 197 (202)
.+.|.|..
T Consensus 194 pl~L~V~g 201 (257)
T 1b6u_A 194 PLLVSVTG 201 (257)
T ss_dssp CEEECCBC
T ss_pred CEEEEEec
Confidence 45666654
No 273
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.07 E-value=1.9e-09 Score=84.17 Aligned_cols=90 Identities=16% Similarity=0.136 Sum_probs=64.7
Q ss_pred ccCCeeEEecCCeEEEEEEEEeecCC---ceEEEeCCEE-----------ccc------CCcEEEEEe--eCCeEEEEEc
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYPKP---KVSFYFNDEL-----------IEM------GGRYDSSYT--RNGQATLFIN 166 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P~P---~i~W~k~g~~-----------l~~------~~r~~i~~~--~~~~~~L~I~ 166 (202)
.|.+.+.+.+|+++.|.|.+.+.+.+ .|.|+|++.. +.. ..|+..... ..+...|.|.
T Consensus 9 ~P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 88 (226)
T 4f80_A 9 GPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIH 88 (226)
T ss_dssp CCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEES
T ss_pred CCCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEe
Confidence 34443488999999999999988776 5899987532 111 122222110 1235789999
Q ss_pred cCCCCCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 167 KMLDRDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
++..+|+|.|+|.|.|..|.....+.+.+...
T Consensus 89 ~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~ 120 (226)
T 4f80_A 89 NVTASDSGKYLCYFQDGDFYEKALVELKVAAL 120 (226)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred eCchHHCeeEEEEEECCCcEEEEEEEEeeccc
Confidence 99999999999999999999888777766543
No 274
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.06 E-value=8.2e-10 Score=84.89 Aligned_cols=62 Identities=11% Similarity=-0.023 Sum_probs=47.3
Q ss_pred cCC-eEEEEEEEEee-cCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCC-CCCEEEEEEEEeCCceEEEEE
Q psy5280 118 KNE-NSSLFWFVYGY-PKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLD-RDVGMYEALASNEHGTARQRV 191 (202)
Q Consensus 118 ~G~-~v~L~C~v~G~-P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~N~~G~~~~~~ 191 (202)
.|. ++.|.|.+.|. |.|.++|++++..+... ..|.|..... .|.|.|+|.|.|.+|..+..+
T Consensus 122 ~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~------------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 122 NMTCELHLTCSVEDADDNVSFRWEALGNTLSSQ------------PNLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp CSSEEEEEEEEEESCCTTCEEEEEETTEEEESS------------SEEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred CCCceEEEEEEEecCCCceEEEEEeCCEEcCCC------------CeEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 355 89999999995 58999999999876432 2355544444 389999999999999886543
No 275
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.06 E-value=5.9e-11 Score=99.20 Aligned_cols=91 Identities=12% Similarity=-0.023 Sum_probs=74.4
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCE-EEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVG-MYEALA 180 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G-~Y~C~a 180 (202)
.+|.|...+.+. .+.+|+++.|.|.+.|.|.|.+.|++++..+....... .....+.|.|.++...|+| .|+|.|
T Consensus 157 ~~P~i~~~~~~~-~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~~Y~C~a 232 (347)
T 2ifg_A 157 GVPTLKVQVPNA-SVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS---GGLPSLGLTLANVTSDLNRKNVTCWA 232 (347)
T ss_dssp CCCEEEEECCSS-CCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC---CCSSEEEEEEESCCSTTTTCCEEECC
T ss_pred CCCceeccCCce-EEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc---eecccceEEEeeCChHHCCCeEEEEE
Confidence 478888888777 88999999999999999999999999987654321110 1145678999999999999 999999
Q ss_pred EeCCceEEEEEEEEee
Q psy5280 181 SNEHGTARQRVSSGNP 196 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~ 196 (202)
.|..|..+..+.|.|.
T Consensus 233 ~n~~g~~~~~~~l~V~ 248 (347)
T 2ifg_A 233 ENDVGRAEVSVQVNVS 248 (347)
T ss_dssp EETTEECCEEECCCCB
T ss_pred EcCCCCEEEEEEEEEc
Confidence 9999998877776654
No 276
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.06 E-value=7.9e-11 Score=90.42 Aligned_cols=91 Identities=9% Similarity=0.031 Sum_probs=66.8
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+|.|...+. . .+.+|+++.|.|.+.|.|. .+.|+|++..+....+... .......|.|.++..+|+|.|+|.|.
T Consensus 4 ~~P~i~~~p~-~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (198)
T 1ugn_A 4 PKPTLWAEPG-S-VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQ--ELVKKGQFPIPSITWEHTGRYRCYYG 78 (198)
T ss_dssp CCCEEEEESC-S-EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCH--HHHTTTEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEeccCC-C-cccCCCcEEEEEEecCCCc-EEEEEECCccccccccccc--cCCcccEEEECCCCHHHCeEEEEEEE
Confidence 3677776664 4 7889999999999999876 7999999987642111000 01235689999999999999999999
Q ss_pred eCC-c--eEEEEEEEEeec
Q psy5280 182 NEH-G--TARQRVSSGNPA 197 (202)
Q Consensus 182 N~~-G--~~~~~~~L~V~~ 197 (202)
|.. | ..+..+.|.|..
T Consensus 79 n~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 79 SDTAGRSESSDPLELVVTG 97 (198)
T ss_dssp ETTTEECCCCCCEEEEEEC
T ss_pred CCCCCcccCCccEEEEEcc
Confidence 988 6 334556666654
No 277
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.06 E-value=4.3e-10 Score=87.50 Aligned_cols=92 Identities=8% Similarity=-0.019 Sum_probs=61.9
Q ss_pred CCeEEeccCCeeEEecCCeE-EEEEEEE-eecCCceEEEeCCEEcccCCcEEEEEe--eCCeEEEEEccCCCCCCEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENS-SLFWFVY-GYPKPKVSFYFNDELIEMGGRYDSSYT--RNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v-~L~C~v~-G~P~P~i~W~k~g~~l~~~~r~~i~~~--~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
+|.+....... . .+|+.+ .|.|.+. |.|.|.|+|++++.............. -.....|.|..+...|.|.|+|
T Consensus 116 ~P~~~~~~~~~-~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC 193 (221)
T 3eow_R 116 KPQNTAEVQKV-Q-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTC 193 (221)
T ss_dssp CCEEEEEEECC-C-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEE
T ss_pred CCCceeecCCc-c-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEE
Confidence 56554333333 2 578888 5999988 899999999987543322111000000 0124679999999999999999
Q ss_pred EEEeCCceEEEEEEEEee
Q psy5280 179 LASNEHGTARQRVSSGNP 196 (202)
Q Consensus 179 ~a~N~~G~~~~~~~L~V~ 196 (202)
.|.|..+.....+.|.+.
T Consensus 194 ~a~n~~~~~~~~~~v~~~ 211 (221)
T 3eow_R 194 KVEHESFEKPQLLTVSLT 211 (221)
T ss_dssp EECCSCSSSCEEEEECCC
T ss_pred EEECCCCCCCeEEEEEEE
Confidence 999999987766666554
No 278
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.06 E-value=1.5e-09 Score=76.37 Aligned_cols=87 Identities=15% Similarity=0.129 Sum_probs=61.9
Q ss_pred CCeeEEecCCeEEEEEEEEe-ecCCceEEEeCC----EEcccCCcEEEEEeeC---CeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 111 HDTQYGIKNENSSLFWFVYG-YPKPKVSFYFND----ELIEMGGRYDSSYTRN---GQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 111 ~~~~~v~~G~~v~L~C~v~G-~P~P~i~W~k~g----~~l~~~~r~~i~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
.+...+..|+.+.|+|.+.+ .|.|.|+|.|.+ ..|.........-.+. ....|.|..+...|+|.|.|.|.|
T Consensus 21 ~S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~ 100 (122)
T 1xau_A 21 NSKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNF 100 (122)
T ss_dssp TEEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEE
T ss_pred eccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeC
Confidence 34448899999999999976 689999999965 3443222211111111 235799999999999999999999
Q ss_pred CCceEEEE-EEEEeec
Q psy5280 183 EHGTARQR-VSSGNPA 197 (202)
Q Consensus 183 ~~G~~~~~-~~L~V~~ 197 (202)
..|...+. ..|.|.+
T Consensus 101 ~~g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 101 NSQVINSHSVTIHVRE 116 (122)
T ss_dssp TTEEEECCCEEEEEC-
T ss_pred CCCceeeeEEEEEEEe
Confidence 99977554 4455544
No 279
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.06 E-value=3.2e-10 Score=89.62 Aligned_cols=72 Identities=10% Similarity=0.132 Sum_probs=51.4
Q ss_pred EecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEEEEEe------eCC----eEEEEEccCCCCC-CEEEEEEEEe
Q psy5280 116 GIKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYDSSYT------RNG----QATLFINKMLDRD-VGMYEALASN 182 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~i~~~------~~~----~~~L~I~~~~~~D-~G~Y~C~a~N 182 (202)
+.+|+.+.|.|.+.|.|+| .++|+|+|..+........... ..+ ...|.|......| .|.|+|.|.|
T Consensus 137 ~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~ 216 (246)
T 4dzb_B 137 ISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQF 216 (246)
T ss_dssp HHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEE
T ss_pred ccCCCcEEEEEEEccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEe
Confidence 3458999999999998765 8999999998865322110000 011 2358888888888 9999999999
Q ss_pred CCceE
Q psy5280 183 EHGTA 187 (202)
Q Consensus 183 ~~G~~ 187 (202)
.....
T Consensus 217 ~~~~~ 221 (246)
T 4dzb_B 217 YGLSE 221 (246)
T ss_dssp CCBCT
T ss_pred cCCCC
Confidence 87653
No 280
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.06 E-value=1.4e-09 Score=85.91 Aligned_cols=77 Identities=21% Similarity=0.135 Sum_probs=58.2
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CEE---c-----------ccCCcEEEEEeeCCeEEEEEccCCC
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DEL---I-----------EMGGRYDSSYTRNGQATLFINKMLD 170 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~---l-----------~~~~r~~i~~~~~~~~~L~I~~~~~ 170 (202)
...+... .+.+|+++.|.|.+.|.|.+.|.|+|. +.. + ....|+.+.........|.|.++..
T Consensus 5 ~~~p~~v-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 5 HQWPATL-VQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEECSEE-EEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eCCCceE-EecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 3344455 889999999999999999999999982 110 0 1124666644345567899999999
Q ss_pred CCCEEEEEEEEeCC
Q psy5280 171 RDVGMYEALASNEH 184 (202)
Q Consensus 171 ~D~G~Y~C~a~N~~ 184 (202)
+|+|.|.|.+.|..
T Consensus 84 ~D~G~Y~C~~~~~~ 97 (245)
T 3nfj_J 84 SDSGFYLCAWSVSV 97 (245)
T ss_dssp GGCEEEEEEEECCT
T ss_pred hhCEEEEEEEeecc
Confidence 99999999999943
No 281
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.05 E-value=3.8e-10 Score=88.79 Aligned_cols=90 Identities=12% Similarity=0.056 Sum_probs=66.5
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec----CCceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEEEEcc
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP----KPKVSFYFND--E---LIE---------MGGRYDSSYTRNGQATLFINK 167 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P----~P~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L~I~~ 167 (202)
++..+.+. .+.+|+++.|.|.+.|.| .|.+.|+|+. . .+. ...|+.+.. .....+|.|.+
T Consensus 4 v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~ 81 (240)
T 1moe_A 4 LTQSPASL-AVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG-SRTDFTLIIDP 81 (240)
T ss_dssp EEEECSEE-EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESS
T ss_pred eEeeCCeE-EecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEe-cCCeEEEEEcC
Confidence 44555555 889999999999999998 7899999852 1 111 134666633 34566899999
Q ss_pred CCCCCCEEEEEEEEeCCce-EEEEEEEEeec
Q psy5280 168 MLDRDVGMYEALASNEHGT-ARQRVSSGNPA 197 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~G~-~~~~~~L~V~~ 197 (202)
+..+|+|.|.|.|.|..+. ....+.|.|..
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 112 (240)
T 1moe_A 82 VEADDVATYYCQQTNEDPYTFGGGTKLEIKG 112 (240)
T ss_dssp CCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred CChhhCEEEEEEEccCCceeecCCEEEEEec
Confidence 9999999999999998764 33445666654
No 282
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.05 E-value=5e-10 Score=86.37 Aligned_cols=79 Identities=13% Similarity=0.062 Sum_probs=61.2
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeC--CEEcc------------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFN--DELIE------------MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~l~------------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.+.+|+++.|.|.+. |.+.+.|+|+ +..+. ...++.+.. ......|.|.++..+|+|.|.|.|
T Consensus 11 ~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~ 87 (211)
T 3tv3_L 11 SGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK-SGNTASLTVSGLQTDDEAVYYCGS 87 (211)
T ss_dssp EECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEEESCCGGGCEEEEEEE
T ss_pred EEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc-cCCEEEEEECCCChhHCEEEEEEE
Confidence 889999999999998 8899999994 22211 235666533 355778999999999999999999
Q ss_pred EeCCc--eEEEEEEEEee
Q psy5280 181 SNEHG--TARQRVSSGNP 196 (202)
Q Consensus 181 ~N~~G--~~~~~~~L~V~ 196 (202)
.|..| .....+.|.|.
T Consensus 88 ~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 88 LVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EETTTEEEECCCEEEEEC
T ss_pred ecCCCceeECCCceEEEe
Confidence 99988 34445666665
No 283
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.05 E-value=1.1e-09 Score=87.62 Aligned_cols=77 Identities=21% Similarity=0.181 Sum_probs=58.5
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CE---Ecc-------------cCCcEEEEEe-eCCeEEEEEc
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DE---LIE-------------MGGRYDSSYT-RNGQATLFIN 166 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~---~l~-------------~~~r~~i~~~-~~~~~~L~I~ 166 (202)
.++... .+.+|+++.|.|.+.|.| .|.|.|+|+ +. .+. ...|+.+... .....+|.|.
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (257)
T 1f3r_B 5 LESGPG-LVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMN 83 (257)
T ss_dssp EEECCS-EECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEE
T ss_pred ECCCCc-cccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEEC
Confidence 344555 789999999999999986 689999985 21 110 1356766332 1345789999
Q ss_pred cCCCCCCEEEEEEEEeCCc
Q psy5280 167 KMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G 185 (202)
++..+|+|.|.|.|.|..|
T Consensus 84 ~v~~~DsG~Y~C~a~n~~g 102 (257)
T 1f3r_B 84 SLQTDDTGTYYCTRDLYGG 102 (257)
T ss_dssp SCCTTCCEEEEEEEESSSS
T ss_pred CCCcccCEEEEEEEccccc
Confidence 9999999999999999865
No 284
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.04 E-value=1.9e-10 Score=90.53 Aligned_cols=89 Identities=8% Similarity=-0.071 Sum_probs=63.6
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeE--EEEEccCCCCCCEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQA--TLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~--~L~I~~~~~~D~G~Y~C~a 180 (202)
+|.|...+. . .+.+|+++.|.|.+.| +.+.+.|+|+|..+....+... ...... .|.|.++..+|+|.|+|.|
T Consensus 9 ~P~i~~~p~-~-~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 9 MPFISAKSS-P-VIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRL--KFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp CCCEEESSC-S-EEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEEC--C----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCEEEecCC-C-ccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccC--CCCcceeeEEEEcccccccCEEEEEEE
Confidence 677766665 4 7889999999999987 7889999999866543221110 012234 8999999999999999999
Q ss_pred EeCCceEE--EEEEEEee
Q psy5280 181 SNEHGTAR--QRVSSGNP 196 (202)
Q Consensus 181 ~N~~G~~~--~~~~L~V~ 196 (202)
.|..|... ..+.|.|.
T Consensus 84 ~n~~~~~~~s~~~~l~V~ 101 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVT 101 (218)
T ss_dssp EETTTEEEECCCEEEEEE
T ss_pred EcCCCceeecCCEEEEEc
Confidence 99887433 33556554
No 285
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.04 E-value=1.2e-09 Score=85.34 Aligned_cols=90 Identities=13% Similarity=0.105 Sum_probs=65.6
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--E---E---------cccCCcEEEEEeeCCeEEEEEccCC
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--E---L---------IEMGGRYDSSYTRNGQATLFINKML 169 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~---~---------l~~~~r~~i~~~~~~~~~L~I~~~~ 169 (202)
+.+...+.+. .+.+|+++.|.|.+.|.|.+.+.|+|+. . . .....++.+. .......|.|.++.
T Consensus 25 ~~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~ 102 (237)
T 3sob_L 25 IQMTQSPSSL-SASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGS-GSGTDFTLTISSLQ 102 (237)
T ss_dssp CCEEEECSEE-EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCC
T ss_pred ceEEeCCCeE-EEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEE-cCCCEEEEEECCCC
Confidence 4455556556 8999999999999999999999999842 1 1 1123566663 23457889999999
Q ss_pred CCCCEEEEEEEEeCCceE-EEEEEEEe
Q psy5280 170 DRDVGMYEALASNEHGTA-RQRVSSGN 195 (202)
Q Consensus 170 ~~D~G~Y~C~a~N~~G~~-~~~~~L~V 195 (202)
.+|+|.|.|.+.|..+.. ...+.|.|
T Consensus 103 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V 129 (237)
T 3sob_L 103 PEDFATYYCQQSYTTPPTFGQGTKVEI 129 (237)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred hhhCeEEEEeeccCCceEEcCcEEEEE
Confidence 999999999999977632 22334554
No 286
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.04 E-value=6.4e-11 Score=97.73 Aligned_cols=130 Identities=11% Similarity=0.023 Sum_probs=80.0
Q ss_pred eeeeeecCC-C-CCeeeecCCCeecCCCCc----------eeee-----ccccccCCCCC-CCC----------------
Q psy5280 56 DTQEKLNPE-R-PKFEPYLPPGVPFHPDKS----------FYFP-----RDFDLERPPRE-GYA---------------- 101 (202)
Q Consensus 56 ~~~~~~~~~-~-~~~~~w~~~g~~~~p~~~----------~~~~-----~~~~ie~~~~~-~~~---------------- 101 (202)
...|.+.+. + ...+.|+|+|.++..... +.+. .....++.|.| |.+
T Consensus 28 ~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~~~ 107 (323)
T 2wqr_A 28 QLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCAD 107 (323)
T ss_dssp EEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECCCCC
T ss_pred EEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeecCCC
Confidence 456888775 3 357999999988654311 1111 11122244443 211
Q ss_pred ----CCCeEEeccCCeeEEecCCeEEEEEEEEee-cCC---ceEEEeCC-EEcccCCcEEEEEeeC----CeEEEEEccC
Q psy5280 102 ----QAPRFLNQEHDTQYGIKNENSSLFWFVYGY-PKP---KVSFYFND-ELIEMGGRYDSSYTRN----GQATLFINKM 168 (202)
Q Consensus 102 ----~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~-P~P---~i~W~k~g-~~l~~~~r~~i~~~~~----~~~~L~I~~~ 168 (202)
.++.++..+... .+.+|+++.|.|.+.|. |.| .|+|+|++ ..+........ .... ..+.|.|.++
T Consensus 108 ~~~~~p~v~~~~p~~~-~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~-~~~~g~~~~~~~L~I~~~ 185 (323)
T 2wqr_A 108 SNPRGVSAYLSRPSPF-DLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEE-KQRNGTLTVTSTLPVGTR 185 (323)
T ss_dssp SSGGGCEEEECCCCHH-HHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEE-ECTTSCEEEEEEEECCHH
T ss_pred CCCCCCEEEEcCCCHH-HhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCc-cCCCCCEEEEEEEEECHH
Confidence 122344444444 56789999999999997 566 89999975 44432221111 0001 1357999999
Q ss_pred CCCCCEEEEEEEEeCCceE
Q psy5280 169 LDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G~~ 187 (202)
..+|+|.|+|.|.|..+..
T Consensus 186 ~~~D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 186 DWIEGETYQCRVTHPHLPR 204 (323)
T ss_dssp HHHTTCCEEEEEECTTSSS
T ss_pred HccCCCCEEEEEECCCCCC
Confidence 9999999999999987543
No 287
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.04 E-value=7.7e-10 Score=84.68 Aligned_cols=76 Identities=13% Similarity=0.043 Sum_probs=54.5
Q ss_pred ecCCeEEEEEEEE-eecCCceEEEeCCEEcccCCcEEEEEeeC-CeEE-EEEccCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy5280 117 IKNENSSLFWFVY-GYPKPKVSFYFNDELIEMGGRYDSSYTRN-GQAT-LFINKMLDRDVGMYEALASNEHGTARQRVSS 193 (202)
Q Consensus 117 ~~G~~v~L~C~v~-G~P~P~i~W~k~g~~l~~~~r~~i~~~~~-~~~~-L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L 193 (202)
..|+.+.|.|.+. |.|.|.|+|+|+|..+........ .... +... ..+..+...|.|.|+|.|.|..|..++.+.+
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~-~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVS-QDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEE-ECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CCCCeEEEEEecCCccCCCEEEEEECCEECccccceEE-ecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 4588999999995 999999999999998875432221 1111 1111 2234555689999999999999998776654
No 288
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.04 E-value=1.7e-09 Score=76.15 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=58.1
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEee--cCCceEEEeC--CE----EcccCCcEEEEEe-eCCeEEEEEccCCCCCCEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFN--DE----LIEMGGRYDSSYT-RNGQATLFINKMLDRDVGMY 176 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~--g~----~l~~~~r~~i~~~-~~~~~~L~I~~~~~~D~G~Y 176 (202)
+...+... .+.+|++|.|.|.+.+. |.+.+.|+|+ +. .+....|+.+... ......|.|.++..+|+|.|
T Consensus 3 v~q~p~~~-~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 81 (111)
T 2ywz_A 3 VDQTPRTI-TKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTY 81 (111)
T ss_dssp EEEECSEE-EECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred eEECCCcE-EEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEE
Confidence 33445555 88999999999999987 5678999985 22 3334567765332 23467899999999999999
Q ss_pred EEEEEeC
Q psy5280 177 EALASNE 183 (202)
Q Consensus 177 ~C~a~N~ 183 (202)
.|.+.|.
T Consensus 82 ~C~~~~~ 88 (111)
T 2ywz_A 82 KCQADYS 88 (111)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999993
No 289
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.04 E-value=1e-09 Score=87.36 Aligned_cols=74 Identities=14% Similarity=0.134 Sum_probs=55.4
Q ss_pred cCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEEc------c-----------cCCcEEEEEee-CCeEEEEEcc
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DELI------E-----------MGGRYDSSYTR-NGQATLFINK 167 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~l------~-----------~~~r~~i~~~~-~~~~~L~I~~ 167 (202)
+... .+.+|+++.|.|.+.|.| .+.+.|+|+ +..+ . ...|+.+.... .....|.|.+
T Consensus 141 ~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 219 (256)
T 3ux9_B 141 SGGG-LVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNS 219 (256)
T ss_dssp ECCE-EECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCe-EEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECC
Confidence 3344 678999999999999987 789999986 3221 1 12366664332 3356799999
Q ss_pred CCCCCCEEEEEEEEeCC
Q psy5280 168 MLDRDVGMYEALASNEH 184 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~ 184 (202)
+..+|+|.|.|.|.|..
T Consensus 220 v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 220 LRAEDTAVYYCARYIDF 236 (256)
T ss_dssp CCGGGCEEEEEEEEETT
T ss_pred CChhhCEEEEEEEEcCC
Confidence 99999999999999964
No 290
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.04 E-value=8.3e-10 Score=84.59 Aligned_cols=80 Identities=14% Similarity=0.135 Sum_probs=62.8
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEccc-------------------CCcEEEEEeeCCeEEEEEccCCCCCCEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM-------------------GGRYDSSYTRNGQATLFINKMLDRDVGM 175 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~-------------------~~r~~i~~~~~~~~~L~I~~~~~~D~G~ 175 (202)
.+.+|+++.|.|.+.+.|.+.+.|++++..... ..++.+ ..++.|.|.++...|+|.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~----~~~~~L~i~~v~~~D~G~ 85 (208)
T 3r4d_A 10 QVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREII----YSNGSLLFQMITMKDMGV 85 (208)
T ss_dssp EEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEE----CTTSCEEECSCCGGGCEE
T ss_pred eeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEE----ecCCeEEEccccccCCeE
Confidence 788999999999988999999999997542211 223433 334579999999999999
Q ss_pred EEEEEEeCC-ceEEEEEEEEeecC
Q psy5280 176 YEALASNEH-GTARQRVSSGNPAQ 198 (202)
Q Consensus 176 Y~C~a~N~~-G~~~~~~~L~V~~~ 198 (202)
|+|.+.|.. +.....+.|.|..+
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~ 109 (208)
T 3r4d_A 86 YTLDMTDENYRRTQATVRFHVHQP 109 (208)
T ss_dssp EEEEEECSSCEEEEEEEEEEEECC
T ss_pred EEEEEEcccCceeEEEEEEEeccC
Confidence 999999995 66677777887643
No 291
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.04 E-value=1.3e-10 Score=88.24 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=63.5
Q ss_pred CeEEeccCCeeEEecCCeEEEEEE-EEeecC-CceEEEeCCEEccc--CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWF-VYGYPK-PKVSFYFNDELIEM--GGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~-v~G~P~-P~i~W~k~g~~l~~--~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
|.|...+.....+.+|+.+.|.|. +.|.|. +.+.|++++..+.. ..+... ......|.|.++..+|+|.|+|.
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~---~~~~~~L~i~~v~~~d~G~Y~C~ 84 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFV---SQTNGNLYIANVEASDKGNYSCF 84 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEE---CTTTCCEEESSCCGGGCEEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEE---EcCCCeEEECcCCcccCeEEEEE
Confidence 444443333338999999999999 899999 99999999977742 222222 13457899999999999999999
Q ss_pred EEeCCceEEE
Q psy5280 180 ASNEHGTARQ 189 (202)
Q Consensus 180 a~N~~G~~~~ 189 (202)
+.|..+....
T Consensus 85 ~~~~~~~~~~ 94 (201)
T 3s97_C 85 VSSPSITKSV 94 (201)
T ss_dssp EEEGGGTEEE
T ss_pred EEecCCCcch
Confidence 9998876554
No 292
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.03 E-value=6.6e-10 Score=87.43 Aligned_cols=87 Identities=14% Similarity=0.007 Sum_probs=64.4
Q ss_pred cCCeeEEecCCeEEEEEEEEe---ecCCceEEEeCCEEcc------------------------------cCCcEEEEEe
Q psy5280 110 EHDTQYGIKNENSSLFWFVYG---YPKPKVSFYFNDELIE------------------------------MGGRYDSSYT 156 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G---~P~P~i~W~k~g~~l~------------------------------~~~r~~i~~~ 156 (202)
+.....+.+|+++.|.|.+.| .|.|.|.|+|++.... ...|+.+ .
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~ 85 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV--A 85 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC--S
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe--c
Confidence 333338899999999999998 8899999999875421 1223332 0
Q ss_pred eCCeEEEEEccCCCCCCEEEEEEEEeCCceE-----EEEEEEEeecC
Q psy5280 157 RNGQATLFINKMLDRDVGMYEALASNEHGTA-----RQRVSSGNPAQ 198 (202)
Q Consensus 157 ~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~-----~~~~~L~V~~~ 198 (202)
..+...|.|.++..+|+|.|+|.+.|..+.. ...+.|.|..+
T Consensus 86 ~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 86 NLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp CTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred cCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 1123579999999999999999999988753 56778887653
No 293
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.03 E-value=1e-10 Score=95.97 Aligned_cols=80 Identities=13% Similarity=-0.037 Sum_probs=49.6
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCce-----EEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGT-----ARQ 189 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~-----~~~ 189 (202)
.+.+|+++.|.|.+. .|.+.+.|+|+|..+.................|.|.++. |+|.|+|.|.|..+. .+.
T Consensus 229 ~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~ 305 (316)
T 3vh8_G 229 KVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSD 305 (316)
T ss_dssp CCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCC
T ss_pred eecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCC
Confidence 467899999999997 478899999999776532211110001123689999999 999999999998774 344
Q ss_pred EEEEEeec
Q psy5280 190 RVSSGNPA 197 (202)
Q Consensus 190 ~~~L~V~~ 197 (202)
.+.|.|..
T Consensus 306 ~~~l~V~g 313 (316)
T 3vh8_G 306 PLLVSVTG 313 (316)
T ss_dssp CEEC----
T ss_pred cEEEEEeC
Confidence 45666654
No 294
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.03 E-value=1.4e-09 Score=76.20 Aligned_cols=77 Identities=10% Similarity=0.141 Sum_probs=59.0
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCCC
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKMLD 170 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~ 170 (202)
.+...+.+. .+.+|+++.|.|.+.+.+.+.+.|+++. ..+. ...|+.+.. ......|.|.++..
T Consensus 5 ~v~q~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~ 82 (109)
T 2q20_A 5 QMTQSPSSL-SASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSG-SGTDFTFTISSLQP 82 (109)
T ss_dssp CEEEECSEE-EECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCG
T ss_pred cEEeeCCEE-EecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec-cCCEEEEEECCCCh
Confidence 344445555 8899999999999999888899999863 1121 135676632 34567899999999
Q ss_pred CCCEEEEEEEEeC
Q psy5280 171 RDVGMYEALASNE 183 (202)
Q Consensus 171 ~D~G~Y~C~a~N~ 183 (202)
+|+|.|.|.+.|.
T Consensus 83 ~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 83 EDIATYYCQQYDN 95 (109)
T ss_dssp GGCEEEEEEECSS
T ss_pred hhCEEEEEEEeeC
Confidence 9999999999885
No 295
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.03 E-value=3.4e-10 Score=87.27 Aligned_cols=91 Identities=12% Similarity=0.028 Sum_probs=62.2
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
+|.|...+. . .+.+|+++.|.|.+.+ |.+.+.|+|+|..+.................|.|.++..+|+|.|+|.|.|
T Consensus 8 ~P~i~~~p~-~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 8 KPSLLAHPG-P-LVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCEEEEESC-S-EEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCeEEEEcC-C-ccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 566665554 4 7889999999999974 788999999987654321110000011246899999999999999999987
Q ss_pred CCc-----eEEEEEEEEee
Q psy5280 183 EHG-----TARQRVSSGNP 196 (202)
Q Consensus 183 ~~G-----~~~~~~~L~V~ 196 (202)
..+ ..+..+.|.|.
T Consensus 85 ~~~~~~~~~~s~~~~l~V~ 103 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVII 103 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEE
T ss_pred CCCCccccCCCCCEEEEee
Confidence 531 22344555554
No 296
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.03 E-value=2e-10 Score=86.45 Aligned_cols=76 Identities=17% Similarity=0.121 Sum_probs=61.2
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCC-ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKP-KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
+|.+...+.+. .+.+|+++.|.|.+.|.|.| .+.|++++..+.. ....|.|.++..+|+|.|+|.+.
T Consensus 4 ~P~i~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~-----------~~~~L~i~~v~~~d~G~Y~C~~~ 71 (176)
T 1f2q_A 4 KPKVSLNPPWN-RIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE-----------TNSSLNIVNAKFEDSGEYKCQHQ 71 (176)
T ss_dssp CCCCEEESSCS-EEETTCCEEEECCTTCC----CCEEEETTEECSC-----------CSSEEEECSCCGGGCEEEEEECT
T ss_pred CCEEEcCCCCc-ceecCCcEEEEEeCCCCCCcceEEEEECCeECCC-----------CceEEEEeccceecCEEEEEEcC
Confidence 56777777776 88999999999999999886 6999999987753 24689999999999999999999
Q ss_pred eCCceEEEE
Q psy5280 182 NEHGTARQR 190 (202)
Q Consensus 182 N~~G~~~~~ 190 (202)
|..++....
T Consensus 72 ~~~~s~~~~ 80 (176)
T 1f2q_A 72 QVNESEPVY 80 (176)
T ss_dssp TSSCCCCEE
T ss_pred CccccccEE
Confidence 987755433
No 297
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.03 E-value=1.1e-09 Score=86.73 Aligned_cols=77 Identities=17% Similarity=0.124 Sum_probs=55.9
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEEcc----------------cCCcEEEEEe-eCCeEEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DELIE----------------MGGRYDSSYT-RNGQATLF 164 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~l~----------------~~~r~~i~~~-~~~~~~L~ 164 (202)
++..+... .+.+|+++.|.|.+.|.| .|.+.|+|+ +..+. ...++.+... ......|.
T Consensus 125 ~~~~~~~~-~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~ 203 (242)
T 2znx_A 125 QLQESGPS-LVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLD 203 (242)
T ss_dssp EEEEECCS-EECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEE
T ss_pred eeecCCcc-eecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEE
Confidence 33344444 688999999999999986 578999984 22210 1456665322 12356899
Q ss_pred EccCCCCCCEEEEEEEEeC
Q psy5280 165 INKMLDRDVGMYEALASNE 183 (202)
Q Consensus 165 I~~~~~~D~G~Y~C~a~N~ 183 (202)
|.++..+|+|.|.|.|.|.
T Consensus 204 I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 204 LNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp ECSCCGGGCEEEEEEETTS
T ss_pred ECCCCcCcCEEEEEeccCC
Confidence 9999999999999999984
No 298
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.02 E-value=1.7e-09 Score=83.73 Aligned_cols=85 Identities=19% Similarity=0.081 Sum_probs=63.5
Q ss_pred eEEecCCeEEEEEEEEeecCC-----ceEEEeCCEEccc---------------CCcEEEEEe--eCCeEEEEEccCCCC
Q psy5280 114 QYGIKNENSSLFWFVYGYPKP-----KVSFYFNDELIEM---------------GGRYDSSYT--RNGQATLFINKMLDR 171 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P~P-----~i~W~k~g~~l~~---------------~~r~~i~~~--~~~~~~L~I~~~~~~ 171 (202)
..+.+|+++.|.|.+.|.|.+ .+.|+|++..+.. ..+..+... ..+...|.|.++..+
T Consensus 11 v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 90 (222)
T 3sbw_C 11 YVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQ 90 (222)
T ss_dssp EEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGG
T ss_pred EEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccc
Confidence 378899999999999988844 7999997643311 134443110 123468999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEeecCC
Q psy5280 172 DVGMYEALASNEHGTARQRVSSGNPAQG 199 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~~~~~~L~V~~~~ 199 (202)
|+|.|+|.+.| .|.....+.|.|.++.
T Consensus 91 D~G~Y~C~~~~-~~~~~~~~~l~V~~~~ 117 (222)
T 3sbw_C 91 DAGVYRCMISY-GGADYKRITVKVNAPY 117 (222)
T ss_dssp GCEEEEEEEES-SSEEEEEEEEEEEBCC
T ss_pred cCeEEEEEEEe-CCCceeEEEEEEECCC
Confidence 99999999999 7777788888887653
No 299
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.02 E-value=1.1e-09 Score=87.02 Aligned_cols=92 Identities=11% Similarity=0.030 Sum_probs=66.9
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeec-----CCceEEEeCC--EEc------------ccCCcEEEEEeeCCeEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYP-----KPKVSFYFND--ELI------------EMGGRYDSSYTRNGQATL 163 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P-----~P~i~W~k~g--~~l------------~~~~r~~i~~~~~~~~~L 163 (202)
++.+...+.+. .+.+|+++.|.|.+.|.| .|.|.|+|+. ..+ ....++.+.. ......|
T Consensus 38 ~~~~~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L 115 (254)
T 2c1o_A 38 ELVMTQSPLTL-SVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSG-SGTDFTL 115 (254)
T ss_dssp CCCEEEECSEE-EECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEE
T ss_pred ceeEEeCCceE-EecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEec-CCCEEEE
Confidence 45666666666 899999999999999998 4899999743 221 1135666633 3456789
Q ss_pred EEccCCCCCCEEEEEEEEeCCceEE-EEEEEEee
Q psy5280 164 FINKMLDRDVGMYEALASNEHGTAR-QRVSSGNP 196 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~~G~~~-~~~~L~V~ 196 (202)
.|.++..+|+|.|.|.|.|..+... ..+.|.|.
T Consensus 116 ~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 149 (254)
T 2c1o_A 116 KISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK 149 (254)
T ss_dssp EESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC
T ss_pred EECcCCcccCEEEEEEEEcCcceEecCCEEEEEC
Confidence 9999999999999999999876432 12345554
No 300
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.02 E-value=1.8e-10 Score=91.25 Aligned_cols=91 Identities=13% Similarity=0.171 Sum_probs=65.0
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCc-----eEEEeCCEEccc--------CCcEE-------E--EEeeCCeEEEE
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPK-----VSFYFNDELIEM--------GGRYD-------S--SYTRNGQATLF 164 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~-----i~W~k~g~~l~~--------~~r~~-------i--~~~~~~~~~L~ 164 (202)
+..+... .+.+|+++.|.|.+.|.|.+. |.|+|++..... ..... + .........|.
T Consensus 7 v~~p~~~-~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~ 85 (248)
T 3pv7_A 7 MMAGGTQ-ITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLR 85 (248)
T ss_dssp CSTTSEE-EEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEE
T ss_pred EeCCCCe-EEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEE
Confidence 3344444 888999999999999999887 999996422110 00000 0 00001234599
Q ss_pred EccCCCCCCEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 165 INKMLDRDVGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 165 I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|.++..+|+|.|+|.+.|..|.....+.|.|.++
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~ 119 (248)
T 3pv7_A 86 LPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVAS 119 (248)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred eCCCCHHHCeEEEEEEEeCCccceeEEEEEEecC
Confidence 9999999999999999999998888888888753
No 301
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.02 E-value=1.9e-09 Score=77.20 Aligned_cols=89 Identities=15% Similarity=0.092 Sum_probs=63.5
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEEEEccCCCCC
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--E---LIE---------MGGRYDSSYTRNGQATLFINKMLDRD 172 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~D 172 (202)
...+... .+.+|++|.|.|.+.+.+.+.+.|+|.. . .+. ...|+.+.. ......|.|.++..+|
T Consensus 5 ~q~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~~D 82 (120)
T 1mqk_L 5 TQTPVSL-SASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSG-SGTQFSLKINSLLPED 82 (120)
T ss_dssp EEECSEE-EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGG
T ss_pred EecCCeE-EEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEec-cCCEEEEEECCCCHHH
Confidence 3345555 8899999999999999888899999853 2 111 135676632 3456789999999999
Q ss_pred CEEEEEEEEeCC-c-eEEEEEEEEeec
Q psy5280 173 VGMYEALASNEH-G-TARQRVSSGNPA 197 (202)
Q Consensus 173 ~G~Y~C~a~N~~-G-~~~~~~~L~V~~ 197 (202)
+|.|.|.+.|.. . .......|.|..
T Consensus 83 sG~Y~C~~~~~~~~~~fg~gt~L~V~~ 109 (120)
T 1mqk_L 83 FGSYYCQHHYGTPPLTFGGGTKLEIKR 109 (120)
T ss_dssp CEEEEEEECSSSSSCCBCCCEEEEEC-
T ss_pred CEEEEEEEEeCCCceEECCCeEEEEec
Confidence 999999999864 1 122334666653
No 302
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.02 E-value=1.4e-10 Score=90.29 Aligned_cols=85 Identities=13% Similarity=0.034 Sum_probs=64.8
Q ss_pred ccCCeeEEecCCeEEEEEEEEeecC-CceEEEeCCEEcc---------c----CCcEE----------EEEeeCCeEEEE
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYPK-PKVSFYFNDELIE---------M----GGRYD----------SSYTRNGQATLF 164 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P~-P~i~W~k~g~~l~---------~----~~r~~----------i~~~~~~~~~L~ 164 (202)
.+.+. .+.+|+++.|.|.+.+.|. +.+.|++++.... . ..++. + ...+.|.
T Consensus 6 ~p~~~-~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~----~~~~~L~ 80 (231)
T 2pet_A 6 VPPLV-EVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQL----DSQGRLV 80 (231)
T ss_dssp CCSEE-EEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEE----CTTCCEE
T ss_pred CCCcE-EEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCcccccccccccccccccc----CCCceEE
Confidence 44455 8899999999999999995 8999997643211 1 11222 2 3334599
Q ss_pred EccCCCCCCEEEEEEEEeCC-ceEEEEEEEEeecC
Q psy5280 165 INKMLDRDVGMYEALASNEH-GTARQRVSSGNPAQ 198 (202)
Q Consensus 165 I~~~~~~D~G~Y~C~a~N~~-G~~~~~~~L~V~~~ 198 (202)
|.++..+|+|.|+|.+.|.. |..+..+.|.|..+
T Consensus 81 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 115 (231)
T 2pet_A 81 LAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAK 115 (231)
T ss_dssp ESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBC
T ss_pred EcccCcccCceEEEEEEecCCCceEEEEEEEEEec
Confidence 99999999999999999998 88888888888754
No 303
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.02 E-value=1e-09 Score=79.21 Aligned_cols=83 Identities=14% Similarity=0.003 Sum_probs=62.1
Q ss_pred eEEecCCeEEEEEEEEe---ecCCceEEEeCCEEc-----c-----------------------cC--CcEEEEEeeCCe
Q psy5280 114 QYGIKNENSSLFWFVYG---YPKPKVSFYFNDELI-----E-----------------------MG--GRYDSSYTRNGQ 160 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G---~P~P~i~W~k~g~~l-----~-----------------------~~--~r~~i~~~~~~~ 160 (202)
..+.+|+++.|.|.+.+ .+.+.|.|+|+.... . .. .|+.+. ....
T Consensus 14 v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~--~~~~ 91 (135)
T 1xt5_A 14 VEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA--NLAA 91 (135)
T ss_dssp EEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEES--CTTS
T ss_pred EEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEe--cCCC
Confidence 38899999999999864 677899999864321 0 11 444441 1224
Q ss_pred EEEEEccCCCCCCEEEEEEEEeC-----CceEEEEEEEEeecC
Q psy5280 161 ATLFINKMLDRDVGMYEALASNE-----HGTARQRVSSGNPAQ 198 (202)
Q Consensus 161 ~~L~I~~~~~~D~G~Y~C~a~N~-----~G~~~~~~~L~V~~~ 198 (202)
..|.|.++..+|+|.|.|.+.|. .|.....+.|.|.+.
T Consensus 92 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g~ 134 (135)
T 1xt5_A 92 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 134 (135)
T ss_dssp CCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEETT
T ss_pred CeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEecC
Confidence 67999999999999999999994 566778889988764
No 304
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.02 E-value=1.3e-09 Score=84.10 Aligned_cols=84 Identities=13% Similarity=0.039 Sum_probs=62.3
Q ss_pred cCCeeEEecCCeEEEEEEEEeec---CCceEEEeCC--EEc------------ccCCcEEEEEeeCCeEEEEEccCCCCC
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYP---KPKVSFYFND--ELI------------EMGGRYDSSYTRNGQATLFINKMLDRD 172 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P---~P~i~W~k~g--~~l------------~~~~r~~i~~~~~~~~~L~I~~~~~~D 172 (202)
+... .+.+|+++.|.|.+.|.| .|.|.|+|++ ..+ ....|+.+.. ......|.|.++..+|
T Consensus 7 p~~~-~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D 84 (212)
T 1q0x_L 7 ESAL-TTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-IGDKAALTITGAQTED 84 (212)
T ss_dssp CSEE-EECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGG
T ss_pred CCeE-eecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe-eCCEEEEEECCCCccC
Confidence 5555 889999999999999988 4799999862 222 1135666533 3456789999999999
Q ss_pred CEEEEEEEEeCCceEE-EEEEEEe
Q psy5280 173 VGMYEALASNEHGTAR-QRVSSGN 195 (202)
Q Consensus 173 ~G~Y~C~a~N~~G~~~-~~~~L~V 195 (202)
+|.|.|.|.|..+... ..+.|.|
T Consensus 85 ~G~Y~C~~~~~~~~~~~~~~~l~V 108 (212)
T 1q0x_L 85 EAIYFCALWSNNKLVFGGGTKLTV 108 (212)
T ss_dssp CEEEEEEEECSSCEEECCCEEEEE
T ss_pred CEEEEEEEecCchhhcCCCeEEEE
Confidence 9999999999887432 2345555
No 305
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.01 E-value=1.5e-09 Score=85.29 Aligned_cols=77 Identities=13% Similarity=0.123 Sum_probs=56.3
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecC--CceEEEeC--CEEcc-----------------cCCcEEEEEee-CCeEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPK--PKVSFYFN--DELIE-----------------MGGRYDSSYTR-NGQATL 163 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~--P~i~W~k~--g~~l~-----------------~~~r~~i~~~~-~~~~~L 163 (202)
++..+... .+.+|+++.|.|.+.|.|. +.+.|+|+ +..+. ...++.+.... .....|
T Consensus 122 ~~~~~~~~-~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 200 (240)
T 1moe_A 122 QLQQSGAE-LVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYL 200 (240)
T ss_dssp EEEECCCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEE
T ss_pred EEeCCCce-EEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEE
Confidence 44555555 7889999999999999874 58999995 22210 13456553221 335789
Q ss_pred EEccCCCCCCEEEEEEEEeC
Q psy5280 164 FINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.|.++..+|+|.|.|.|.+.
T Consensus 201 ~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 201 QLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp EECSCCGGGCEEEEEEECST
T ss_pred EECcCCHHHCEEEEEEEEec
Confidence 99999999999999999853
No 306
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.01 E-value=4.5e-10 Score=88.22 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=57.7
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEc---------ccCCcEEEEEe-eCCeEEEEEccCCCC
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELI---------EMGGRYDSSYT-RNGQATLFINKMLDR 171 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l---------~~~~r~~i~~~-~~~~~~L~I~~~~~~ 171 (202)
...+.+. .+.+|+++.|.|.+.|.|.|.+.|+|++ ..+ ....++.+... ......|.|.++..+
T Consensus 131 ~~~p~~~-~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 209 (238)
T 2p1y_A 131 RQSPQSL-TVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPG 209 (238)
T ss_dssp EEECSEE-EEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGG
T ss_pred EccCceE-EEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHH
Confidence 3334444 7889999999999999999999999963 111 12345555321 223578999999999
Q ss_pred CCEEEEEEEEeCC
Q psy5280 172 DVGMYEALASNEH 184 (202)
Q Consensus 172 D~G~Y~C~a~N~~ 184 (202)
|+|.|.|.|.|..
T Consensus 210 D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 210 DSATYFCAAIDTN 222 (238)
T ss_dssp GCEEEEEEEEETT
T ss_pred HCEEEEEEEeeCC
Confidence 9999999999984
No 307
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.01 E-value=1.8e-10 Score=92.27 Aligned_cols=82 Identities=17% Similarity=0.064 Sum_probs=61.4
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEe--CCEEcc------------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYF--NDELIE------------MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k--~g~~l~------------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.+.+|+++.|.|.+.|.|.|.+.|+| ++..+. ...++.+.. ......|.|.++..+|+|.|.|.|
T Consensus 150 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a 228 (257)
T 1f3r_B 150 SASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSG-SGTDYTLTISSLQPEDVATYFCYQ 228 (257)
T ss_dssp CCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-EBTEEEEEECSCCGGGCSEEEEEE
T ss_pred EEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEec-CCCEEEEEECCCChhhCEEEEEEE
Confidence 67899999999999999999999999 554331 135666532 234678999999999999999999
Q ss_pred EeCCceEEEEEEEEeec
Q psy5280 181 SNEHGTARQRVSSGNPA 197 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~~ 197 (202)
.|........+.|.|..
T Consensus 229 ~n~~~~~g~gt~l~V~~ 245 (257)
T 1f3r_B 229 YNNGYTFGAGTKLELKA 245 (257)
T ss_dssp ESSSEEECCCCEECCSS
T ss_pred eCCCCeECCCEEEEEeC
Confidence 99762222335666654
No 308
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.00 E-value=1.1e-10 Score=95.15 Aligned_cols=77 Identities=9% Similarity=-0.100 Sum_probs=55.4
Q ss_pred EEecCCeEEEEEEE-EeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy5280 115 YGIKNENSSLFWFV-YGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRV 191 (202)
Q Consensus 115 ~v~~G~~v~L~C~v-~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~ 191 (202)
....|+.+.|.|.+ .|.|.|.++|++++..+.................|.|..+...|.|.|+|.|.|..|......
T Consensus 125 ~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 202 (308)
T 4fom_A 125 IDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRY 202 (308)
T ss_dssp CTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEE
T ss_pred EEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEE
Confidence 44568899999975 689999999999998775432111000001135799999999999999999999987654443
No 309
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.00 E-value=1.3e-09 Score=76.89 Aligned_cols=77 Identities=19% Similarity=0.195 Sum_probs=56.5
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--EE---c-------ccCCcEEEEEe--eCCeEEEEEccCCCCC
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--EL---I-------EMGGRYDSSYT--RNGQATLFINKMLDRD 172 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~~---l-------~~~~r~~i~~~--~~~~~~L~I~~~~~~D 172 (202)
...+.+. .+.+|+++.|.|.+.+.+ +.+.|+|.. .. + ....|+.+... ......|.|.++..+|
T Consensus 5 ~q~p~~~-~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 82 (113)
T 1h5b_A 5 EQSPSAL-SLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLED 82 (113)
T ss_dssp EEECSEE-EEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGG
T ss_pred EECCCEE-EEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhh
Confidence 3345555 889999999999998865 789999853 11 1 12355555321 2245689999999999
Q ss_pred CEEEEEEEEeCCc
Q psy5280 173 VGMYEALASNEHG 185 (202)
Q Consensus 173 ~G~Y~C~a~N~~G 185 (202)
+|.|.|.+.|..|
T Consensus 83 sG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 83 SGTYFCAAEASSG 95 (113)
T ss_dssp CEEEEEEEECSSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999999876
No 310
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.00 E-value=1.8e-09 Score=85.59 Aligned_cols=90 Identities=18% Similarity=0.109 Sum_probs=65.2
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCCCC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKMLDR 171 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~ 171 (202)
+...+.+. .+.+|+++.|.|.+.|.|.|.+.|+|+. ..+. ...|+.+.. ......|.|.++..+
T Consensus 4 v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~ 81 (242)
T 2znx_A 4 LTQSPATL-SVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSG-SGTDFTLSINSVETE 81 (242)
T ss_dssp EEEECSEE-EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGG
T ss_pred EEEcCCeE-EEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEec-CCCEEEEEECCCChH
Confidence 45556666 8899999999999999999999999852 1111 135666632 345678999999999
Q ss_pred CCEEEEEEEEeCCceE-EEEEEEEeec
Q psy5280 172 DVGMYEALASNEHGTA-RQRVSSGNPA 197 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~-~~~~~L~V~~ 197 (202)
|+|.|.|.|.|..+.. ...+.|.|..
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~ 108 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITG 108 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcC
Confidence 9999999999986532 2234555543
No 311
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.00 E-value=1.6e-09 Score=85.67 Aligned_cols=89 Identities=12% Similarity=0.073 Sum_probs=63.2
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EE---c--------------ccCCcEEEEEe-eCCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--EL---I--------------EMGGRYDSSYT-RNGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~---l--------------~~~~r~~i~~~-~~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|.| .+.|.|+|+. .. + ....|+.+... .....+|.|
T Consensus 7 ~~p~~~-~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 85 (247)
T 2ghw_B 7 VQSGGG-VVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQM 85 (247)
T ss_dssp EEECCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EecCCE-EEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEE
Confidence 344455 889999999999999987 6889999842 11 1 12356766433 134578999
Q ss_pred ccCCCCCCEEEEEEEEeCCceE--EEEEEEEeec
Q psy5280 166 NKMLDRDVGMYEALASNEHGTA--RQRVSSGNPA 197 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~--~~~~~L~V~~ 197 (202)
.++..+|+|.|.|.|.|..+.. ...+.|.|..
T Consensus 86 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~ 119 (247)
T 2ghw_B 86 NSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSS 119 (247)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEECCCEEEEECS
T ss_pred CcCCHHHCEEEEEeeeccCCccccCCceEEEEec
Confidence 9999999999999999984332 2334666654
No 312
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.00 E-value=1.6e-09 Score=85.71 Aligned_cols=90 Identities=11% Similarity=0.117 Sum_probs=65.0
Q ss_pred eEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEc---------ccCCcEEEEEeeCCeEEEEEccCCC
Q psy5280 105 RFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELI---------EMGGRYDSSYTRNGQATLFINKMLD 170 (202)
Q Consensus 105 ~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l---------~~~~r~~i~~~~~~~~~L~I~~~~~ 170 (202)
.++..+.+. .+.+|+++.|.|.+.|.|.|.+.|+|+. ..+ ....++.+. ......+|.|.++..
T Consensus 6 ~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 6 VLIQSTSSL-SASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGS-GSGTDYSLTISNLEQ 83 (250)
T ss_dssp CEECSCSEE-EECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCCG
T ss_pred eEEecCCEE-EeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEe-CCCCEEEEEEccCCh
Confidence 344445555 8899999999999999999999999853 111 113566552 234466899999999
Q ss_pred CCCEEEEEEEEeCCceEE-EEEEEEee
Q psy5280 171 RDVGMYEALASNEHGTAR-QRVSSGNP 196 (202)
Q Consensus 171 ~D~G~Y~C~a~N~~G~~~-~~~~L~V~ 196 (202)
+|+|.|.|.|.|..+... ..+.|.|.
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~ 110 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIR 110 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEE
Confidence 999999999999866432 23445554
No 313
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.00 E-value=1.6e-09 Score=84.03 Aligned_cols=89 Identities=16% Similarity=0.113 Sum_probs=63.4
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEEcc-----------------cCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DELIE-----------------MGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~l~-----------------~~~r~~i~~~~-~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|.| .+.+.|+|+ +..+. ...|+.+.... .....|.|
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (219)
T 1c1e_H 5 VQSGPE-LKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQI 83 (219)
T ss_dssp EECCCE-EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEE
T ss_pred eCCCCe-EecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEE
Confidence 445555 889999999999999876 688999986 33221 13566663321 23578999
Q ss_pred ccCCCCCCEEEEEEEEeCCce----EEEEEEEEeec
Q psy5280 166 NKMLDRDVGMYEALASNEHGT----ARQRVSSGNPA 197 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~----~~~~~~L~V~~ 197 (202)
.++..+|+|.|.|.+.|..|. ....+.|.|..
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 84 NNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp CSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred CCCCcccCEEEEEEEeccCcccceeecCceEEEEec
Confidence 999999999999999998742 22345566553
No 314
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.00 E-value=4.4e-09 Score=95.63 Aligned_cols=84 Identities=13% Similarity=0.001 Sum_probs=60.4
Q ss_pred EEecCCeEEEEEEEEee--cCCceEEEeCCEEcccCCcEEEE-------EeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 115 YGIKNENSSLFWFVYGY--PKPKVSFYFNDELIEMGGRYDSS-------YTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~--P~P~i~W~k~g~~l~~~~r~~i~-------~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
.+.+|+++.|.|.+.|. |.+.+.|++++..+......... ........|.|.++..+|+|.|+|.+.|..|
T Consensus 235 ~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 314 (772)
T 3v2a_R 235 ELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLM 314 (772)
T ss_dssp EEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSC
T ss_pred EEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCc
Confidence 78899999999999985 45679999999876543322110 0011246899999999999999999999999
Q ss_pred eEEEEEEEEeecC
Q psy5280 186 TARQRVSSGNPAQ 198 (202)
Q Consensus 186 ~~~~~~~L~V~~~ 198 (202)
..+..+.|.|..+
T Consensus 315 ~~~~~~~l~V~~~ 327 (772)
T 3v2a_R 315 TKKNSTFVRVHEK 327 (772)
T ss_dssp EEEEEEEEEEECC
T ss_pred ceeEEEEEEEeCC
Confidence 9888888888654
No 315
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.00 E-value=2.7e-10 Score=88.60 Aligned_cols=76 Identities=13% Similarity=0.036 Sum_probs=55.9
Q ss_pred EEecC--CeEEEEEEEEeecCCceEEEeC---CEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 115 YGIKN--ENSSLFWFVYGYPKPKVSFYFN---DELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 115 ~v~~G--~~v~L~C~v~G~P~P~i~W~k~---g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
.+.+| +++.|.|.+.| |.|.++|+++ +..+....++.. .....|.|.++..+|+|.|+|.|.|..+...+
T Consensus 18 ~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~----~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s 92 (213)
T 2x1w_L 18 YITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISW----DSKKGFTIPSYMISYAGMVFCEAKINDESYQS 92 (213)
T ss_dssp EECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEE----ETTTEEEEEGGGTTTCSEEEEEEC----CEEC
T ss_pred EEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccc----cCCccEEEccCChhcCceEEEEEEECCeeEEE
Confidence 88899 99999999987 8899999884 766665554443 23457999999999999999999996554332
Q ss_pred E-EEEEe
Q psy5280 190 R-VSSGN 195 (202)
Q Consensus 190 ~-~~L~V 195 (202)
. +.|.|
T Consensus 93 ~~~~l~v 99 (213)
T 2x1w_L 93 IMYIVVV 99 (213)
T ss_dssp CCEEEEE
T ss_pred EEEEEEE
Confidence 2 45555
No 316
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.00 E-value=1.4e-09 Score=86.77 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=67.1
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CEEcc------------cCCcEEEEEeeCCeEEEEEccC
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DELIE------------MGGRYDSSYTRNGQATLFINKM 168 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~l~------------~~~r~~i~~~~~~~~~L~I~~~ 168 (202)
+|.+...+... .+.+|+++.|.|.+.|.|.|.+.|+|+ +..+. ...++.+. ......+|.|.++
T Consensus 138 ~~~~~~~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v 215 (256)
T 3umt_A 138 DIQLTQSPSSL-SASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGS-RSGSDYSLTISSL 215 (256)
T ss_dssp CCCEEEECSEE-EECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEE-EETTEEEEEECSC
T ss_pred ccEEEcCCCeE-EEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEe-cCCCEEEEEECCC
Confidence 45555555555 889999999999999999999999984 22111 13566553 2345678999999
Q ss_pred CCCCCEEEEEEEEeCCceEE-EEEEEEeecC
Q psy5280 169 LDRDVGMYEALASNEHGTAR-QRVSSGNPAQ 198 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G~~~-~~~~L~V~~~ 198 (202)
..+|+|.|.|.|.|..+... ..+.|.|...
T Consensus 216 ~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 216 ESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp CGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred ChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 99999999999999654332 3366776643
No 317
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.00 E-value=8.2e-10 Score=87.89 Aligned_cols=71 Identities=17% Similarity=0.249 Sum_probs=51.2
Q ss_pred ecCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEEEEE--eeCC----eEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 117 IKNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYDSSY--TRNG----QATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~i~~--~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
.+|+.+.|.|.+.|. |.| .|+|+|+|..+.......... ...+ ...|.|..+..+|+|.|+|.|.|.....
T Consensus 163 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 163 LTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp HHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred cCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 368999999999995 444 699999999876541111000 0011 2468999999999999999999987764
No 318
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.99 E-value=7.2e-10 Score=86.72 Aligned_cols=69 Identities=16% Similarity=0.119 Sum_probs=46.2
Q ss_pred cCCeEEEEEEEEe-ecCC-ceEEEeCCEEcccCCcEEEEEeeCCe----EEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 118 KNENSSLFWFVYG-YPKP-KVSFYFNDELIEMGGRYDSSYTRNGQ----ATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 118 ~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~----~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
+|+.+.|.|.+.| .|.| .|+|+|+|..+.............+. ..|.|......|.|.|+|.|.|....
T Consensus 131 ~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 131 SRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp TSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred cCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 5899999999999 5766 89999999987532111110111111 23445444445689999999998764
No 319
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.99 E-value=1.2e-09 Score=88.34 Aligned_cols=92 Identities=11% Similarity=0.061 Sum_probs=66.9
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccC
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKM 168 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~ 168 (202)
.+.+...+.+. .+.+|+++.|.|.+.+.|.|.+.|+|++ ..+. ...|+.+.. ......|.|.++
T Consensus 12 ~~~v~~~p~~~-~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 89 (276)
T 3auv_A 12 DIQMTQSPSSL-SASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG-SGTDFTLTISSL 89 (276)
T ss_dssp CCCEEEECSEE-ECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSC
T ss_pred ceeEEeCCCeE-EEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEec-cCCeEEEEEccC
Confidence 34566666666 8899999999999999999999999864 1221 134666632 345668999999
Q ss_pred CCCCCEEEEEEEEeCCce-EEEEEEEEee
Q psy5280 169 LDRDVGMYEALASNEHGT-ARQRVSSGNP 196 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G~-~~~~~~L~V~ 196 (202)
..+|+|.|.|.|.|..+. ....+.|.|.
T Consensus 90 ~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~ 118 (276)
T 3auv_A 90 QPEDFATYYCQQHYTTPPTFGCGTKVEIK 118 (276)
T ss_dssp CGGGCEEEEEEECSSSSCCCCCCEEEEC-
T ss_pred ChhhCEEEEEEEecCCcccccCCEEEEEe
Confidence 999999999999998654 2223445544
No 320
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.99 E-value=7.4e-10 Score=86.29 Aligned_cols=76 Identities=11% Similarity=0.120 Sum_probs=56.5
Q ss_pred EecCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 116 GIKNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
+.+|+.+.|.|.+.|. |.| .|+|+++|..+... ...... ..+ ...|.|..+...| |.|+|.|.|..|....
T Consensus 139 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~-~~~~~~-~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~ 215 (222)
T 1q9r_B 139 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH-TFPAVL-QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 215 (222)
T ss_dssp CCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE-EEEEEE-ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred ccCCCcEEEEEEEccEECCCCEEEEecCCeEcceE-eccccc-cCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcE
Confidence 4579999999999996 999 99999998765431 111100 111 2468999999899 9999999999998766
Q ss_pred EEEEE
Q psy5280 190 RVSSG 194 (202)
Q Consensus 190 ~~~L~ 194 (202)
...|.
T Consensus 216 ~~~i~ 220 (222)
T 1q9r_B 216 DKKIV 220 (222)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 65544
No 321
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.99 E-value=1.8e-09 Score=77.42 Aligned_cols=87 Identities=14% Similarity=0.023 Sum_probs=62.2
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecCC----ceEEEeC----------------CEEccc----CCcEEEEEee------
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPKP----KVSFYFN----------------DELIEM----GGRYDSSYTR------ 157 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~P----~i~W~k~----------------g~~l~~----~~r~~i~~~~------ 157 (202)
..+... .+.+|+++.|.|.+.+.+.+ .|.|+|. +..+.. ..|+.+....
T Consensus 7 ~~p~~v-~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~ 85 (128)
T 3r0n_A 7 QVLPEV-RGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQD 85 (128)
T ss_dssp ECCSEE-ECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTT
T ss_pred ecCCeE-EEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccc
Confidence 334444 78899999999999987766 7999996 222222 1355441111
Q ss_pred ----CCeEEEEEccCCCCCCEEEEEEEE-eCCceEEEEEEEEe
Q psy5280 158 ----NGQATLFINKMLDRDVGMYEALAS-NEHGTARQRVSSGN 195 (202)
Q Consensus 158 ----~~~~~L~I~~~~~~D~G~Y~C~a~-N~~G~~~~~~~L~V 195 (202)
.....|.|.++..+|+|.|.|.+. +..|.....+.|.|
T Consensus 86 ~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 128 (128)
T 3r0n_A 86 TEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128 (128)
T ss_dssp CCCBCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred cccCCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEEC
Confidence 113489999999999999999765 56798888888875
No 322
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.99 E-value=1.1e-09 Score=76.97 Aligned_cols=86 Identities=13% Similarity=0.064 Sum_probs=58.6
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCC-----ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKP-----KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMY 176 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P-----~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y 176 (202)
.+|.+...+.. .+.+|++|+|.|.+.+.|.+ .+.|+|+|..+.. . .....|.|..+..+|+|.|
T Consensus 7 ~kP~l~~~p~~--~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~-----~----~~~~~l~i~~v~~~dsG~Y 75 (108)
T 4hwn_A 7 PAPILRAVPSA--EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS-----R----GLSSEFQIPTASEDHSGSY 75 (108)
T ss_dssp CCCEEEEESCS--SCBTTCCEEEEEEC---------CCEEEEEETTEEEEE-----E----ESCCEEEESSCCGGGCEEE
T ss_pred CCCEEEecCCC--cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC-----C----CcccEEEeCccCcccCeEE
Confidence 35666555432 46789999999999876654 3899999987642 1 2356799999999999999
Q ss_pred EEEEEeCCce---EEEEEEEEeecC
Q psy5280 177 EALASNEHGT---ARQRVSSGNPAQ 198 (202)
Q Consensus 177 ~C~a~N~~G~---~~~~~~L~V~~~ 198 (202)
.|.+.|..|. .+..+.|.|.+.
T Consensus 76 ~C~~~~~~~~~~~~S~~l~L~V~g~ 100 (108)
T 4hwn_A 76 WCEAATEDNQVWKQSPQLEIRVQGA 100 (108)
T ss_dssp EEEEECTTSSSEEECCCEEECCBC-
T ss_pred EEEEEeCCCceeccCCCEEEEEEec
Confidence 9999998762 333456666543
No 323
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.98 E-value=5.5e-10 Score=84.65 Aligned_cols=78 Identities=15% Similarity=0.082 Sum_probs=61.4
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEccc------------CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEM------------GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~------------~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
.+.+|++|.|.|.+.+ |.+.|.|+|++..+.. ..|+.+ ...+++|.|.++..+|+|.|.|.+.|
T Consensus 6 ~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~---~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 6 YGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYL---DTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEE---CTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred EEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEE---eCCCCeEEECCCChhhCceEEEEEeC
Confidence 7889999999999854 8899999999875431 123333 12457899999999999999999999
Q ss_pred CCceEEEEEEEEeecC
Q psy5280 183 EHGTARQRVSSGNPAQ 198 (202)
Q Consensus 183 ~~G~~~~~~~L~V~~~ 198 (202)
..| ...+.|.|.++
T Consensus 82 ~~~--~~~~~L~V~~~ 95 (171)
T 1ccz_A 82 ITD--TMKFFLYVLEM 95 (171)
T ss_dssp CCS--CEEEEEEEECC
T ss_pred CCC--cEEEEEEEECc
Confidence 988 56677777654
No 324
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.98 E-value=3.1e-10 Score=97.51 Aligned_cols=73 Identities=11% Similarity=0.011 Sum_probs=55.4
Q ss_pred EecCCeEEEEEEEEeec----CCceEEEeCCEEcccCCcEEEEEeeC----CeEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 116 GIKNENSSLFWFVYGYP----KPKVSFYFNDELIEMGGRYDSSYTRN----GQATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~P----~P~i~W~k~g~~l~~~~r~~i~~~~~----~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
+.+|+++.|.|.+.|.| .+.|+|+|++..+............. ..+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 252 ~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 252 LMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp HCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSS
T ss_pred eecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCC
Confidence 47899999999999994 35899999998876432111101111 13579999999999999999999999976
Q ss_pred E
Q psy5280 188 R 188 (202)
Q Consensus 188 ~ 188 (202)
.
T Consensus 332 ~ 332 (444)
T 1igt_B 332 P 332 (444)
T ss_dssp C
T ss_pred c
Confidence 3
No 325
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.98 E-value=1.1e-09 Score=86.10 Aligned_cols=78 Identities=8% Similarity=0.114 Sum_probs=56.3
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CEEc---------------ccCCcEEEEEeeCCeEEEEEccC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DELI---------------EMGGRYDSSYTRNGQATLFINKM 168 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~l---------------~~~~r~~i~~~~~~~~~L~I~~~ 168 (202)
++..+.+. .+.+|+++.|.|. .|.|.|.|.|+|+ +..+ ....++.+.........|.|.++
T Consensus 3 v~q~p~~~-~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 3 VTQSPRNK-VAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp EEEECSEE-EEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred ceECccce-EEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 44455555 8999999999999 8899999999995 2111 11345655322233568999999
Q ss_pred CCCCCEEEEEEEEeCCc
Q psy5280 169 LDRDVGMYEALASNEHG 185 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G 185 (202)
..+|+|.|.|.|.|..|
T Consensus 81 ~~~DsG~Y~C~~~~~~g 97 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQ 97 (238)
T ss_dssp CGGGCEEEEEEEEC---
T ss_pred CcccCeeEEEEEEeCCC
Confidence 99999999999999876
No 326
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.98 E-value=1.4e-09 Score=83.02 Aligned_cols=88 Identities=13% Similarity=0.087 Sum_probs=63.5
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC-cEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG-RYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~-r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
+|.|...+.. .+.+|+++.|.|.+.+ +.+.+.|+|++..+.... ... .......|.|.++..+|+|.|+|.+.
T Consensus 4 ~P~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~---~~~~~~~L~I~~v~~~D~G~Y~C~~~ 77 (188)
T 1oll_A 4 KPFIWAEPHF--MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPP---ERINKVKFYIPDMNSRMAGQYSCIYR 77 (188)
T ss_dssp CCEEEEESCS--EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSC---TTCCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEeecCC--cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccC---CCcceeEEEeCcCCcccCeEEEEEec
Confidence 5777666654 6889999999999876 346899999998764210 000 01346789999999999999999999
Q ss_pred eCCceE--EEEEEEEee
Q psy5280 182 NEHGTA--RQRVSSGNP 196 (202)
Q Consensus 182 N~~G~~--~~~~~L~V~ 196 (202)
|..|.. +..+.|.|.
T Consensus 78 ~~~~~~~~s~~~~l~V~ 94 (188)
T 1oll_A 78 VGELWSEPSNLLDLVVT 94 (188)
T ss_dssp ETTEECCCCCCEEEEEE
T ss_pred CCCCCCCCCCceEEEec
Confidence 976633 344556554
No 327
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.98 E-value=5e-10 Score=86.06 Aligned_cols=80 Identities=13% Similarity=0.133 Sum_probs=63.1
Q ss_pred eEEecCCeEEEEEEEE--eecCCceEEEe--CCEEc----------ccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 114 QYGIKNENSSLFWFVY--GYPKPKVSFYF--NDELI----------EMGGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~--G~P~P~i~W~k--~g~~l----------~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
..+.+|++|.|.|... +.+.+.|.|+| ++..| ....|+.+ ..+++|.|.++..+|+|.|+|.
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~----~~ngsL~I~~v~~~DsG~Y~c~ 84 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKL----FKNGTLKIKHLKTDDQDIYKVS 84 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEE----CTTSCEEECSCCGGGCEEEEEE
T ss_pred EEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEE----CCCCCEEECCCChhhCEEEEEE
Confidence 3778999999999542 35577999999 88776 24567776 4456899999999999999999
Q ss_pred EEeCCceEE--EEEEEEeec
Q psy5280 180 ASNEHGTAR--QRVSSGNPA 197 (202)
Q Consensus 180 a~N~~G~~~--~~~~L~V~~ 197 (202)
|.|..|... ..+.|.|..
T Consensus 85 ~~n~~g~~~~~~~~~L~V~~ 104 (182)
T 1hnf_A 85 IYDTKGKNVLEKIFDLKIQE 104 (182)
T ss_dssp EEETTSCEEEEEEEEEEEEC
T ss_pred EEeCCCceeEEEEEEEEEcC
Confidence 999998764 456677764
No 328
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.98 E-value=1.2e-09 Score=89.28 Aligned_cols=86 Identities=8% Similarity=-0.043 Sum_probs=60.1
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEE-eecCCceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVY-GYPKPKVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMY 176 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~-G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y 176 (202)
.+|.+....... .+..|+.+.+.|.+. |.|.|.++|++++..+........ ...+ ...|.|..+...|+|.|
T Consensus 116 ~~P~~~~~~~~~-~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~--~~~~~~~~~s~l~i~~~~~~d~g~Y 192 (313)
T 4fqp_A 116 AKPQNTAEVQKV-QLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPG--FLSGTVTVTSLWILVPSSQVDGKNV 192 (313)
T ss_dssp BCCEEEEEECCB-CCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEEC--SSTTCEEEEEEEEECCCGGGTTCEE
T ss_pred cCCcceecccce-EeecCceEEEEEEccCccCCcEEEeecCCccccccceeee--ecccccccceeeeecccccccCeeE
Confidence 345555444444 556788899999765 789999999999877654332221 0011 24688999999999999
Q ss_pred EEEEEeCCceEEEE
Q psy5280 177 EALASNEHGTARQR 190 (202)
Q Consensus 177 ~C~a~N~~G~~~~~ 190 (202)
+|.|.|..+.....
T Consensus 193 ~C~a~n~~~~~~~~ 206 (313)
T 4fqp_A 193 TCKVEHESFEKPQL 206 (313)
T ss_dssp EEEEECTTSSSCEE
T ss_pred EEEEEccCcCccce
Confidence 99999988765433
No 329
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.98 E-value=3e-09 Score=76.72 Aligned_cols=83 Identities=17% Similarity=0.115 Sum_probs=60.5
Q ss_pred EEecCCeEEEEEEEEeecCC---ceEEEeCCEE-----------cc------cCCcEEEEEe--eCCeEEEEEccCCCCC
Q psy5280 115 YGIKNENSSLFWFVYGYPKP---KVSFYFNDEL-----------IE------MGGRYDSSYT--RNGQATLFINKMLDRD 172 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P---~i~W~k~g~~-----------l~------~~~r~~i~~~--~~~~~~L~I~~~~~~D 172 (202)
.+..|++|.|.|.+...+.+ .|.|+|++.. .. -..|+.+... ..+..+|.|.++..+|
T Consensus 16 ~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~D 95 (125)
T 4gos_A 16 AGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTD 95 (125)
T ss_dssp EEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGGG
T ss_pred EEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChHH
Confidence 77889999999998754433 5899986421 11 0233333110 0124579999999999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEeec
Q psy5280 173 VGMYEALASNEHGTARQRVSSGNPA 197 (202)
Q Consensus 173 ~G~Y~C~a~N~~G~~~~~~~L~V~~ 197 (202)
+|.|.|.+.|..|..++.+.|.|=.
T Consensus 96 ~G~Y~C~v~~~~g~~~~~v~LkVG~ 120 (125)
T 4gos_A 96 AGTYKCYIITSKGKGNANLEYKTGH 120 (125)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CEEEEEEEEeCCCeEEEEEEEEECC
Confidence 9999999999999999999998853
No 330
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.98 E-value=2.4e-09 Score=84.46 Aligned_cols=91 Identities=13% Similarity=-0.005 Sum_probs=63.6
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEe--------------CCEEcccC----CcEEEEEeeCCeEEEEE
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYF--------------NDELIEMG----GRYDSSYTRNGQATLFI 165 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k--------------~g~~l~~~----~r~~i~~~~~~~~~L~I 165 (202)
+.++..+... .+.+|+++.|.| ..+.|.+.+.|+| ++..+... .|+.+.........|.|
T Consensus 3 ~~v~~~p~~v-~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 80 (245)
T 4ei6_B 3 PKVLQIPSHQ-IIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKI 80 (245)
T ss_dssp CCCEEECSEE-EEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEE
T ss_pred cceEeCCceE-EecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEE
Confidence 3455556555 889999999999 7788999999998 23222221 66766432234568999
Q ss_pred ccCCCCCCEEEEEEEEeC----CceEEEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNE----HGTARQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~----~G~~~~~~~L~V~ 196 (202)
.++..+|+|.|.|.+.+. .+.....+.|.|.
T Consensus 81 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 115 (245)
T 4ei6_B 81 QPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVL 115 (245)
T ss_dssp CSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEE
T ss_pred CCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEe
Confidence 999999999999999953 2233333455554
No 331
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.97 E-value=3.5e-09 Score=75.70 Aligned_cols=76 Identities=13% Similarity=0.179 Sum_probs=58.3
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCCCC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKMLDR 171 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~ 171 (202)
+...+.+. .+.+|++|.|.|.+.+.+.+.+.|++.. ..+. ...|+.+.. ......|.|.++..+
T Consensus 6 v~q~p~~v-~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~~ 83 (119)
T 2e27_L 6 MTQSPSSL-SASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSG-SGRDYSFSISNLEPE 83 (119)
T ss_dssp EEEECSEE-EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEECSCCGG
T ss_pred eEecCCeE-EEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc-cCCEEEEEECCCChH
Confidence 34445555 8899999999999999988999999852 2121 135676632 345678999999999
Q ss_pred CCEEEEEEEEeC
Q psy5280 172 DVGMYEALASNE 183 (202)
Q Consensus 172 D~G~Y~C~a~N~ 183 (202)
|+|.|.|.+.|.
T Consensus 84 DsG~Y~C~~~~~ 95 (119)
T 2e27_L 84 DAATYYCLQYDN 95 (119)
T ss_dssp GCEEEEEEECGG
T ss_pred HCEEEEEEEccC
Confidence 999999999885
No 332
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.97 E-value=4.3e-10 Score=88.08 Aligned_cols=70 Identities=14% Similarity=0.172 Sum_probs=44.4
Q ss_pred ecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEE--EEEeeC----CeEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 117 IKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYD--SSYTRN----GQATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~--i~~~~~----~~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
.+|+.+.|.|.+.|.+++ .++|+|+|..+....... ...... ....|.|..+..+|+|.|+|.|.|....
T Consensus 147 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 147 LTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp HHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred hcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 369999999999996543 699999998876541110 000001 1246889998889999999999997654
No 333
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.97 E-value=1.6e-09 Score=86.65 Aligned_cols=93 Identities=8% Similarity=0.046 Sum_probs=65.2
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--E---Ec----------ccCCcEEEEEe-eCCeEEEEEcc
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--E---LI----------EMGGRYDSSYT-RNGQATLFINK 167 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~---~l----------~~~~r~~i~~~-~~~~~~L~I~~ 167 (202)
..+...+.+. .+.+|+++.|.|.+.+.|.|.+.|+|.. . .+ ....++.+... .....+|.|.+
T Consensus 4 ~~v~q~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~ 82 (256)
T 3tf7_C 4 QSVTQPDARV-TVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKAS 82 (256)
T ss_dssp CEEECSCSEE-EEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESS
T ss_pred cEEEecCceE-EecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECC
Confidence 3445555555 8999999999999999999999999832 1 11 11334544221 23456899999
Q ss_pred CCCCCCEEEEEEEEeCCce----EEEEEEEEeec
Q psy5280 168 MLDRDVGMYEALASNEHGT----ARQRVSSGNPA 197 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~G~----~~~~~~L~V~~ 197 (202)
+..+|+|.|.|.+.|..+. ....+.|.|..
T Consensus 83 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 83 VHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp CCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred CCcccCEEEEEEEecCCCccceEECCCeEEEEeC
Confidence 9999999999999998652 22234566654
No 334
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.97 E-value=2.7e-09 Score=82.67 Aligned_cols=69 Identities=14% Similarity=0.115 Sum_probs=46.6
Q ss_pred cCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 118 KNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 118 ~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
+|+.+.|.|.+.|. |.+ .|+|+|+|..+.............+ ...|.|......|.|.|+|.|.|....
T Consensus 123 ~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 123 AKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp SSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred cCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 58999999999996 443 8999999998754221111011111 124556655556899999999998753
No 335
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.97 E-value=2.9e-09 Score=84.71 Aligned_cols=92 Identities=12% Similarity=0.061 Sum_probs=66.0
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeec-----CCceEEEeCC--EE---c---------ccCCcEEEEEeeCCeEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYP-----KPKVSFYFND--EL---I---------EMGGRYDSSYTRNGQATL 163 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P-----~P~i~W~k~g--~~---l---------~~~~r~~i~~~~~~~~~L 163 (202)
.+.+...+... .+.+|+++.|.|.+.|.| .+.|.|+|++ .. + ....|+.+.. ......|
T Consensus 34 ~~~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L 111 (252)
T 3bkj_L 34 DVLMTQTPLSL-PVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG-SGTDFTL 111 (252)
T ss_dssp CCCEEEECSEE-EECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEE
T ss_pred ccEEEeCCceE-EEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc-cCCEEEE
Confidence 34455556665 889999999999999998 6899999864 11 1 1135666532 3456789
Q ss_pred EEccCCCCCCEEEEEEEEeCCceEE-EEEEEEee
Q psy5280 164 FINKMLDRDVGMYEALASNEHGTAR-QRVSSGNP 196 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~~G~~~-~~~~L~V~ 196 (202)
.|.++..+|+|.|.|.+.|..+... ..+.|.|.
T Consensus 112 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~ 145 (252)
T 3bkj_L 112 RISRVEAEDLGVYYCFQASLVPLTFGAGTKLELK 145 (252)
T ss_dssp EESSCCGGGCEEEEEEECSBSSCEECCCEEEEEC
T ss_pred EECCCCcccCEEEEEEEEcCCccEECCCEEEEEe
Confidence 9999999999999999999876322 22455554
No 336
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.96 E-value=2.9e-09 Score=85.31 Aligned_cols=92 Identities=11% Similarity=0.052 Sum_probs=65.1
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCC-----ceEEEe--CCEEcc------------cCCcEEEEEeeCCeEEEE
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKP-----KVSFYF--NDELIE------------MGGRYDSSYTRNGQATLF 164 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P-----~i~W~k--~g~~l~------------~~~r~~i~~~~~~~~~L~ 164 (202)
|.+...+... .+.+|+++.|.|.+.|.|.| .+.|+| ++..+. ...++.+.. ......|.
T Consensus 122 ~~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~ 199 (256)
T 1nqb_A 122 IELTQTPLSL-PVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG-SGTDFTLK 199 (256)
T ss_dssp CCEEEECSEE-EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEE
T ss_pred ccEEecCcEE-EEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEc-cCCEEEEE
Confidence 3344444444 78899999999999999876 999999 554331 134665532 34567899
Q ss_pred EccCCCCCCEEEEEEEEeCCceE-EEEEEEEeec
Q psy5280 165 INKMLDRDVGMYEALASNEHGTA-RQRVSSGNPA 197 (202)
Q Consensus 165 I~~~~~~D~G~Y~C~a~N~~G~~-~~~~~L~V~~ 197 (202)
|.++..+|+|.|.|.|.|..+.. ...+.|.|..
T Consensus 200 I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 200 ISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred ECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 99999999999999999864432 2234566653
No 337
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.96 E-value=2.9e-09 Score=74.30 Aligned_cols=76 Identities=17% Similarity=0.188 Sum_probs=57.8
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCCCCC
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKMLDRD 172 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~D 172 (202)
...+.+. .+.+|+++.|.|.+.+.+.+.+.|++.. ..+. ...|+.+.. ......|.|.++..+|
T Consensus 5 ~q~p~~~-~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D 82 (107)
T 1i8k_A 5 TQSPASL-SVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSG-TGTDFVFTIENTLSED 82 (107)
T ss_dssp EEECSEE-ECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGGG
T ss_pred EeCCCeE-EecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEc-cCCEEEEEECCCCHHH
Confidence 3344455 8889999999999999888899999853 1121 135676632 3456789999999999
Q ss_pred CEEEEEEEEeCC
Q psy5280 173 VGMYEALASNEH 184 (202)
Q Consensus 173 ~G~Y~C~a~N~~ 184 (202)
+|.|.|.+.|..
T Consensus 83 sG~Y~C~~~~~~ 94 (107)
T 1i8k_A 83 VGDYYCLQSFNV 94 (107)
T ss_dssp CEEEEEEECSSS
T ss_pred CEEEEEEEeeCC
Confidence 999999998863
No 338
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.96 E-value=2.6e-09 Score=85.19 Aligned_cols=91 Identities=12% Similarity=0.077 Sum_probs=65.2
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecC-CceEEEeC--CEEcc------------cCCcEEEEEeeCCeEEEEEcc
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPK-PKVSFYFN--DELIE------------MGGRYDSSYTRNGQATLFINK 167 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~-P~i~W~k~--g~~l~------------~~~r~~i~~~~~~~~~L~I~~ 167 (202)
++.++..+... .+.+|+++.|.|.+.|.|. |.+.|+|. +..+. ...++.+.. ......|.|.+
T Consensus 149 ~~~~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~ 226 (256)
T 3juy_B 149 EIVLTQAPGTL-SLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSG-SGTDFTLTITR 226 (256)
T ss_dssp CCCEEEECSEE-EECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESS
T ss_pred eeEEEecCCeE-EEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEc-cCCEEEEEECC
Confidence 44566666666 8899999999999999887 89999983 22211 235666533 34567899999
Q ss_pred CCCCCCEEEEEEEEeCCceEE-EEEEEEe
Q psy5280 168 MLDRDVGMYEALASNEHGTAR-QRVSSGN 195 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~G~~~-~~~~L~V 195 (202)
+..+|+|.|.|.|.|..+... ..+.|.|
T Consensus 227 v~~~DsG~Y~C~~~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 227 VEPEDFALYYCQVYGASSYTFGQGTKLER 255 (256)
T ss_dssp CCGGGCSEEEEEECCSSCCEECCCEEEEE
T ss_pred CCHhHCEEEEEEEeeCCCceEcCCEEEEE
Confidence 999999999999999654322 2345544
No 339
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.96 E-value=1.8e-09 Score=88.98 Aligned_cols=69 Identities=10% Similarity=0.128 Sum_probs=51.2
Q ss_pred cCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEEE--EEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 118 KNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYDS--SYTRNG----QATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 118 ~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~i--~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
.|+.+.|.|.+.|.+++ .|+|+|+|..|........ .....+ .+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 233 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 233 SRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp CTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 39999999999995443 6999999998865321100 000011 357999999999999999999999886
No 340
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.96 E-value=1.9e-09 Score=75.43 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=56.8
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCCCCC
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKMLDRD 172 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~D 172 (202)
...+.+. .+.+|+++.|.|.+.+.+.+.+.|+|.. ..+. ...|+.+.. ......|.|.++..+|
T Consensus 5 ~q~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D 82 (108)
T 1qfw_M 5 TQSPKSM-SMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSG-SATDFTLTISSVQAED 82 (108)
T ss_dssp EEECSCE-ECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCB-CSSEEEEEESSCCTTC
T ss_pred EEeCCeE-EEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEc-CCCEEEEEECCCChhh
Confidence 3445555 8889999999999999888899999853 2221 134565521 2335689999999999
Q ss_pred CEEEEEEEEeCC
Q psy5280 173 VGMYEALASNEH 184 (202)
Q Consensus 173 ~G~Y~C~a~N~~ 184 (202)
+|.|.|.+.|..
T Consensus 83 sG~Y~C~~~~~~ 94 (108)
T 1qfw_M 83 FADYHCGQTYNH 94 (108)
T ss_dssp CSEEEEEECSSS
T ss_pred CEEEEEEEccCC
Confidence 999999999863
No 341
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.96 E-value=3.2e-10 Score=88.76 Aligned_cols=75 Identities=13% Similarity=0.184 Sum_probs=54.5
Q ss_pred ecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEE-EEEeeC----CeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 117 IKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYD-SSYTRN----GQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~-i~~~~~----~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
.+|+.+.|.|.+.|.+++ .++|+|+|..+..+.... ...... ..+.|.|..+..+|+|.|+|.|.|..+....
T Consensus 148 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 148 LQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp HTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred hcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 358899999999996543 899999999886542110 000001 1357899999999999999999999887655
Q ss_pred EE
Q psy5280 190 RV 191 (202)
Q Consensus 190 ~~ 191 (202)
++
T Consensus 228 ~~ 229 (234)
T 2j6e_L 228 TV 229 (234)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 342
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.96 E-value=2.5e-09 Score=86.83 Aligned_cols=86 Identities=9% Similarity=0.017 Sum_probs=62.7
Q ss_pred ccCCeeEEecCCeEEEEEEEEeecCCceEEEe--CCEEcc------------cCCcEEEEEeeCCeEEEEEccCCCCCCE
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYPKPKVSFYF--NDELIE------------MGGRYDSSYTRNGQATLFINKMLDRDVG 174 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k--~g~~l~------------~~~r~~i~~~~~~~~~L~I~~~~~~D~G 174 (202)
.+... .+.+|+++.|.|.+.|.| |.+.|+| ++..+. ...++.+.. ......|.|.++..+|+|
T Consensus 168 ~p~~~-~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~DsG 244 (282)
T 1qok_A 168 SPAIM-SASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSG-SGTSYSLTISRMEAEDAA 244 (282)
T ss_dssp ECSEE-EECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCE
T ss_pred CCCEE-EEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEec-CCCEEEEEEccCChhHCE
Confidence 34444 788999999999999999 9999999 554431 135666532 345678999999999999
Q ss_pred EEEEEEEeCCceE-EEEEEEEeec
Q psy5280 175 MYEALASNEHGTA-RQRVSSGNPA 197 (202)
Q Consensus 175 ~Y~C~a~N~~G~~-~~~~~L~V~~ 197 (202)
.|.|.|.|..+.. ...+.|.|..
T Consensus 245 ~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 245 TYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC-
T ss_pred EEEEEEeeCCCceEeCCEEEEEec
Confidence 9999999864322 2345666653
No 343
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.95 E-value=2.7e-09 Score=74.69 Aligned_cols=75 Identities=19% Similarity=0.252 Sum_probs=56.5
Q ss_pred EeccCCeeEEecCCeEEEEEEEEee--cCCceEEEeCC--E----EcccCCcEEEEEe-eCCeEEEEEccCCCCCCEEEE
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFND--E----LIEMGGRYDSSYT-RNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~g--~----~l~~~~r~~i~~~-~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
...+... .+.+|++|.|.|.+.+. +.+.+.|+++. . .+....|+.+... ......|.|.++..+|+|.|.
T Consensus 4 ~q~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 82 (108)
T 2coq_A 4 DQTPRIA-TKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYK 82 (108)
T ss_dssp EEECSEE-EECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred EeCCceE-EEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEE
Confidence 3345555 88999999999999876 35689999863 2 3334567765332 234678999999999999999
Q ss_pred EEEEe
Q psy5280 178 ALASN 182 (202)
Q Consensus 178 C~a~N 182 (202)
|.+.|
T Consensus 83 C~~~~ 87 (108)
T 2coq_A 83 CKAYR 87 (108)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99998
No 344
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.95 E-value=2.6e-09 Score=84.52 Aligned_cols=90 Identities=12% Similarity=0.118 Sum_probs=64.7
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec-----CCceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEEEEc
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP-----KPKVSFYFND--E---LIE---------MGGRYDSSYTRNGQATLFIN 166 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P-----~P~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L~I~ 166 (202)
+...+.+. .+.+|+++.|.|.+.|.| .+.+.|+|+. . .+. ...|+.+.. ......|.|.
T Consensus 4 v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~ 81 (247)
T 1svz_A 4 MTQTPLYL-PVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSG-SGTDFTLKIS 81 (247)
T ss_dssp EEEECSEE-EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEES
T ss_pred EEecCCeE-EecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEecc-CCCEEEEEEC
Confidence 44455555 889999999999999998 6899999842 1 111 135666632 3456789999
Q ss_pred cCCCCCCEEEEEEEEeCCceE-EEEEEEEeec
Q psy5280 167 KMLDRDVGMYEALASNEHGTA-RQRVSSGNPA 197 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G~~-~~~~~L~V~~ 197 (202)
++..+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 82 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 113 (247)
T 1svz_A 82 RVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKG 113 (247)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CCCHHHCEEEEEEEccCCccEECCCEEEEEEC
Confidence 999999999999999986642 2234565543
No 345
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.95 E-value=9.3e-10 Score=85.45 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=53.0
Q ss_pred EecCCeEEEEEEEEe-ecCC-ceEEEeCCEEcccC--------CcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 116 GIKNENSSLFWFVYG-YPKP-KVSFYFNDELIEMG--------GRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 116 v~~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~~~--------~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
+.+|+.+.|.|.+.| .|.| .|+|+|++..+... ..+.+ .+.|.|... ..|.|.|+|.|.|..|
T Consensus 136 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~------~s~L~i~~~-~~d~g~Y~C~a~n~~~ 208 (219)
T 1c1e_H 136 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL------SSSVTVPSS-PRPSETVTCNVAHPAS 208 (219)
T ss_dssp SCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEE------EEEEEEESS-STTTSCCEEEEEEGGG
T ss_pred cccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEE------EEEEEEecc-cCCCCEEEEEEEeCCC
Confidence 457999999999999 8999 99999998765311 11111 246888444 4466999999999999
Q ss_pred eEEEEEEEE
Q psy5280 186 TARQRVSSG 194 (202)
Q Consensus 186 ~~~~~~~L~ 194 (202)
.......|.
T Consensus 209 ~~~~~~~i~ 217 (219)
T 1c1e_H 209 STKVDKKIV 217 (219)
T ss_dssp TEEEEEECC
T ss_pred CccEEEecC
Confidence 876655543
No 346
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.94 E-value=7.3e-09 Score=82.47 Aligned_cols=94 Identities=14% Similarity=0.036 Sum_probs=64.7
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEee--cCCceEEEeCC-----EEc-------------ccCCcEEEEEee-CCeE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFND-----ELI-------------EMGGRYDSSYTR-NGQA 161 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~g-----~~l-------------~~~~r~~i~~~~-~~~~ 161 (202)
+...+..+... .+.+|+++.|.|.+.|. |.+.+.|+|.. ..+ ....|+.+.... ....
T Consensus 8 ~~v~~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 86 (257)
T 3gkz_A 8 KEVQLQESGPS-LVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQV 86 (257)
T ss_dssp -CEEEEEECCS-EECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEE
T ss_pred ccEEEECCCCe-EEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceE
Confidence 44556666677 78999999999999994 47889999832 111 113466663321 2356
Q ss_pred EEEEccCCCCCCEEEEEEEEeCC----ceEEEEEEEEeec
Q psy5280 162 TLFINKMLDRDVGMYEALASNEH----GTARQRVSSGNPA 197 (202)
Q Consensus 162 ~L~I~~~~~~D~G~Y~C~a~N~~----G~~~~~~~L~V~~ 197 (202)
.|.|.++..+|+|.|.|.|.|.. +.....+.|.|..
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~ 126 (257)
T 3gkz_A 87 YLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSG 126 (257)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC-
T ss_pred EEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecC
Confidence 89999999999999999999972 2233345666654
No 347
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.94 E-value=1.3e-08 Score=71.51 Aligned_cols=89 Identities=11% Similarity=-0.024 Sum_probs=65.5
Q ss_pred ccCCeeEEecCCeEEEEEEEEeecCC-ceEEEeCCE-----Ecc---------cCCcEEEEEe-eCCeEEEEEccCCCCC
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYPKP-KVSFYFNDE-----LIE---------MGGRYDSSYT-RNGQATLFINKMLDRD 172 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~g~-----~l~---------~~~r~~i~~~-~~~~~~L~I~~~~~~D 172 (202)
.+... .+.+|+++.|.|.+.+.... .+.|++... .+. ...|+.+... ......|.|.++..+|
T Consensus 7 ~p~~v-~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~D 85 (113)
T 1zox_A 7 GPEEV-SGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSD 85 (113)
T ss_dssp CCSEE-EEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGG
T ss_pred CCCEE-EEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHH
Confidence 34444 88999999999999876544 599999642 121 1345665322 2335689999999999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEeecC
Q psy5280 173 VGMYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 173 ~G~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
+|.|.|.+.+........+.|.|...
T Consensus 86 sG~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (113)
T 1zox_A 86 AGIYWCGITKGGLDPMFKVTVNIGPV 111 (113)
T ss_dssp CEEEEEEECCSSSCCEEEEEEEEECC
T ss_pred CEEEEEeeEcCCCCccEEEEEEEEcC
Confidence 99999999998766778888888753
No 348
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.94 E-value=1.6e-09 Score=80.57 Aligned_cols=80 Identities=13% Similarity=0.081 Sum_probs=61.2
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeec-CCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYP-KPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P-~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.|.+...+... .+.+|+++.|.|.+.|.| .+.+.|+|++..+.... ..+.|.++..+|+|.|+|.+.
T Consensus 4 ~p~i~~~p~~~-~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~-----------~~~~~~~~~~~d~G~Y~C~~~ 71 (170)
T 3ry4_A 4 KAVLKLEPPWI-NVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT-----------QPSYRFKANNNDSGEYTCQTG 71 (170)
T ss_dssp BCEEEEESCCS-EEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCC-----------SSEEEEECCGGGCEEEEEEET
T ss_pred CCEEEeCCCCe-EEECCCcEEEEEEecCCCCcceEEEEECCeEcccCc-----------cceEEEecccccCeEEEEEEe
Confidence 35555556655 788999999999999997 67999999999886532 235567899999999999999
Q ss_pred eCCceEEEEEEEEee
Q psy5280 182 NEHGTARQRVSSGNP 196 (202)
Q Consensus 182 N~~G~~~~~~~L~V~ 196 (202)
|..++.. +.|.|.
T Consensus 72 ~~~~s~~--~~l~v~ 84 (170)
T 3ry4_A 72 QTSLSDP--VHLTVL 84 (170)
T ss_dssp TSBCCCC--EEEEEE
T ss_pred CCCceEe--EEEEEE
Confidence 8766543 444443
No 349
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.94 E-value=1e-09 Score=84.35 Aligned_cols=66 Identities=12% Similarity=0.071 Sum_probs=50.8
Q ss_pred cCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEe
Q psy5280 118 KNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSGN 195 (202)
Q Consensus 118 ~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V 195 (202)
.+..+.|.|.+.|.|.|.++|+++|..+ ... ...|.+.. ...|+|.|+|.|.|.+|..++...+.-
T Consensus 114 ~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~~----------~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~c 179 (182)
T 1hnf_A 114 TCINTTLTCEVMNGTDPELNLYQDGKHL-KLS----------QRVITHKW-TTSLSAKFKCTAGNKVSKESSVEPVSC 179 (182)
T ss_dssp ETTTTEEEEECSSCSSCEEEEEESSCEE-EEE----------SSCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEEE
T ss_pred ccCcEEEEeEccCCCCCEEEEEECCEEC-CCC----------CcEEEEec-ccCCCcEEEEEEEeCCCCcEEcceecC
Confidence 3557999999999999999999999887 211 12233332 478999999999999999988877643
No 350
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.93 E-value=6.5e-10 Score=85.09 Aligned_cols=82 Identities=13% Similarity=0.075 Sum_probs=62.6
Q ss_pred EEecCCeEEEEEEEE----eecCCceEEEeCCEEccc------------CCcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 115 YGIKNENSSLFWFVY----GYPKPKVSFYFNDELIEM------------GGRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~----G~P~P~i~W~k~g~~l~~------------~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
.+.+|+++.|.|.+. |.|.+.+.|++++..+.. ..|..+ ...+...|.|.++..+|+|.|.|
T Consensus 5 ~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~--~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIF--DITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEE--ESTTTTEEEECSCCGGGCEEEEE
T ss_pred EEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEE--ccCCCcEEEEecccchhCeEEEE
Confidence 788999999999985 567889999999987631 123322 11345689999999999999999
Q ss_pred EEEeCCceE-----EEEEEEEeecC
Q psy5280 179 LASNEHGTA-----RQRVSSGNPAQ 198 (202)
Q Consensus 179 ~a~N~~G~~-----~~~~~L~V~~~ 198 (202)
.|.|..|.. ...+.|.|.+.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~ 107 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKAD 107 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECC
T ss_pred EEEcCCCCccccccccEEEEEEcCC
Confidence 999987754 35667777654
No 351
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.93 E-value=2.2e-09 Score=76.92 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=60.1
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCC---ceEEEeCCEEcc--------c----------CCcEEEEEe--eCCeEEEEEc
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKP---KVSFYFNDELIE--------M----------GGRYDSSYT--RNGQATLFIN 166 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P---~i~W~k~g~~l~--------~----------~~r~~i~~~--~~~~~~L~I~ 166 (202)
+... ++..|++|.|.|.+.+.+.. .|.|+|...... . ..|+.+... .....+|.|.
T Consensus 7 p~~v-tv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~ 85 (123)
T 4gjt_B 7 SDVV-TVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 85 (123)
T ss_dssp CSEE-ECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEE
T ss_pred CCEE-EEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEEC
Confidence 3344 78899999999999877654 478998642110 0 123332111 1124579999
Q ss_pred cCCCCCCEEEEEEEEe-CCceEEEEEEEEeecCC
Q psy5280 167 KMLDRDVGMYEALASN-EHGTARQRVSSGNPAQG 199 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N-~~G~~~~~~~L~V~~~~ 199 (202)
++..+|+|.|.|.+.+ ..|.....+.|.|..+-
T Consensus 86 ~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE~~ 119 (123)
T 4gjt_B 86 NAVQADEGEYECRVSTFPAGSFQARLRLRVLEHH 119 (123)
T ss_dssp SCCSSSCSEEEEEEEESSSCEEEEEEEEEC----
T ss_pred CCChHHCEEEEEEEEECCCCeEEeEEEEEEEECc
Confidence 9999999999998765 67888899999998653
No 352
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.93 E-value=1.6e-09 Score=86.59 Aligned_cols=94 Identities=9% Similarity=0.157 Sum_probs=54.0
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CE---Eccc-C--------------CcEEEEEeeCCeEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DE---LIEM-G--------------GRYDSSYTRNGQAT 162 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~---~l~~-~--------------~r~~i~~~~~~~~~ 162 (202)
+|.+...+.+. .+.+|+++.|.|.+.+.|.+.+.|+|. +. .+.. . .++...........
T Consensus 2 s~~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 80 (259)
T 3omz_A 2 SSNLEGRTKSV-IRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLR 80 (259)
T ss_dssp ---------CE-EEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCE
T ss_pred ccccccCCcee-EecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEE
Confidence 34555555666 899999999999999999999999982 11 1100 0 11111111123457
Q ss_pred EEEccCCCCCCEEEEEEEEeCCc---eEEEEEEEEeec
Q psy5280 163 LFINKMLDRDVGMYEALASNEHG---TARQRVSSGNPA 197 (202)
Q Consensus 163 L~I~~~~~~D~G~Y~C~a~N~~G---~~~~~~~L~V~~ 197 (202)
|.|.++..+|+|.|.|.+.|..+ .....+.|.|..
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (259)
T 3omz_A 81 MILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTD 118 (259)
T ss_dssp EEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEec
Confidence 99999999999999999999876 333445566654
No 353
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.93 E-value=4.3e-09 Score=84.33 Aligned_cols=77 Identities=10% Similarity=0.093 Sum_probs=58.6
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEEc---c--------------cCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DELI---E--------------MGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~l---~--------------~~~r~~i~~~~-~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|.| .+.|.|+|+ +..+ . ...|+.+.... ....+|.|
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (256)
T 1nqb_A 5 QQSGAE-LVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQL 83 (256)
T ss_dssp EECCCE-EECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred ECCCCe-eecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEE
Confidence 445555 889999999999999986 679999984 2211 0 13567663321 34578999
Q ss_pred ccCCCCCCEEEEEEEEeCCc
Q psy5280 166 NKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G 185 (202)
.++..+|+|.|.|.+.|..|
T Consensus 84 ~~v~~~DsG~Y~C~~~n~~g 103 (256)
T 1nqb_A 84 SSLTSEDSAVYYCARYDYYG 103 (256)
T ss_dssp CSCCGGGCEEEEEEECCTTS
T ss_pred CcCChhhCEEEEEEEeeccC
Confidence 99999999999999999876
No 354
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.92 E-value=6.1e-10 Score=86.38 Aligned_cols=84 Identities=10% Similarity=-0.016 Sum_probs=59.0
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeec---C-CceEEEeCCEEcccCCcEEEEEeeC----CeEEEEEccCCCCCCEE
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYP---K-PKVSFYFNDELIEMGGRYDSSYTRN----GQATLFINKMLDRDVGM 175 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P---~-P~i~W~k~g~~l~~~~r~~i~~~~~----~~~~L~I~~~~~~D~G~ 175 (202)
..++..+.....+.+|+++.|.|.+.|.| . +.|.|+|++..+............. ....|.|.++..+|+|.
T Consensus 3 ~v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 82 (207)
T 2vol_A 3 SVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKE 82 (207)
T ss_dssp EEEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCC
T ss_pred cEEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCE
Confidence 45566665542378999999999999995 2 3899999997764311000000000 13579999999999999
Q ss_pred EEEEEEeCCceE
Q psy5280 176 YEALASNEHGTA 187 (202)
Q Consensus 176 Y~C~a~N~~G~~ 187 (202)
|+|.|.|..|..
T Consensus 83 Y~C~a~~~~~~~ 94 (207)
T 2vol_A 83 FKCRVNSAAFPA 94 (207)
T ss_dssp EEEEEECTTCSS
T ss_pred EEEEEEccCCCC
Confidence 999999998854
No 355
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.92 E-value=1.9e-09 Score=89.76 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=51.9
Q ss_pred EecCCeEEEEEEEEee-cC-CceEEEeCCEEccc---------CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 116 GIKNENSSLFWFVYGY-PK-PKVSFYFNDELIEM---------GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~-P~-P~i~W~k~g~~l~~---------~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
+.+|+.+.|.|.+.|. |. |.|+|+|++..+.. ..++.+ ...|.|..+...| |.|+|.|.|..
T Consensus 132 ~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~d-G~Y~C~a~n~~ 204 (344)
T 1za6_B 132 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL------SSVVTVPSSSLGT-QTYICNVNHKP 204 (344)
T ss_dssp TTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEE------EEEEEEETTHHHH-BCEEEEEEEGG
T ss_pred ccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEE------EEEEEEcHHHcCC-CcEEEEEEeCC
Confidence 4689999999999998 65 79999999876421 122222 3478998888878 99999999999
Q ss_pred ceEEEE
Q psy5280 185 GTARQR 190 (202)
Q Consensus 185 G~~~~~ 190 (202)
|.....
T Consensus 205 ~~~~~~ 210 (344)
T 1za6_B 205 SNTKVD 210 (344)
T ss_dssp GTEEEE
T ss_pred CCccce
Confidence 875433
No 356
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.92 E-value=5.1e-09 Score=83.43 Aligned_cols=94 Identities=11% Similarity=0.049 Sum_probs=67.1
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEee--cCCceEEEeCC--E---Ec--------------ccCCcEEEEEee-CCe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFND--E---LI--------------EMGGRYDSSYTR-NGQ 160 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~g--~---~l--------------~~~~r~~i~~~~-~~~ 160 (202)
++.|...+... .+.+|+++.|.|.+.|. |.+.+.|+|.. . .+ ....|+.+.... ...
T Consensus 6 ~~~~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 6 HQVQLVQSGAE-VKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp -CCEEEECCCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred ceEEEEecCCc-eecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 55666666666 99999999999999983 77899999732 1 11 012466663322 335
Q ss_pred EEEEEccCCCCCCEEEEEEEEeC------------CceEEEEEEEEeec
Q psy5280 161 ATLFINKMLDRDVGMYEALASNE------------HGTARQRVSSGNPA 197 (202)
Q Consensus 161 ~~L~I~~~~~~D~G~Y~C~a~N~------------~G~~~~~~~L~V~~ 197 (202)
.+|.|.++..+|+|.|.|.+.|. .+.....+.|.|..
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~ 133 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSS 133 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECS
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecC
Confidence 68999999999999999999997 34444455677665
No 357
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.92 E-value=2.7e-09 Score=92.05 Aligned_cols=70 Identities=14% Similarity=0.099 Sum_probs=46.9
Q ss_pred cCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 118 KNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 118 ~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
.+..+.|.|.+.|.|+| .|+|+|+|..+.......+.....+ ...|.|......|.|.|+|.|.|.....
T Consensus 369 ~~~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 444 (457)
T 1hzh_H 369 TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 444 (457)
T ss_dssp GSSEEEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred CCCcEEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCC
Confidence 34449999999998655 8999999998864321111111111 1345566555578999999999987654
No 358
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.91 E-value=2.3e-09 Score=80.69 Aligned_cols=72 Identities=7% Similarity=-0.049 Sum_probs=55.0
Q ss_pred EEecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVS 192 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 192 (202)
.+.+|+++.|.|.+.|.|.| .+.|+|++..+...... .....|.|. ...|+|.|+|.|.|... ..+.
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~------~~~~~l~i~--~~~d~G~Y~C~~~n~~~---~~~~ 77 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP------GQKTEFKVD--SDDQWGEYSCVFLPEPM---GTAN 77 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC------CSEEEEEEC--GGGCCEEEEEEEESTTS---CEEE
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc------CCcEEEEEe--chhhCeEEEEEEECCcC---cEEE
Confidence 67899999999999999888 89999999988765422 224456666 58899999999998432 3455
Q ss_pred EEeec
Q psy5280 193 SGNPA 197 (202)
Q Consensus 193 L~V~~ 197 (202)
|.|..
T Consensus 78 l~V~~ 82 (184)
T 3b5h_A 78 IQLHG 82 (184)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 55543
No 359
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.91 E-value=3.5e-09 Score=88.10 Aligned_cols=88 Identities=10% Similarity=0.046 Sum_probs=64.9
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEEc-----------------ccCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DELI-----------------EMGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~l-----------------~~~~r~~i~~~~-~~~~~L~I 165 (202)
..+... .+.+|+++.|.|.+.|.+ .+.|.|+|+ +..+ ....|+.+.... .....|.|
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (344)
T 1za6_B 5 VQSGAE-VVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVEL 83 (344)
T ss_dssp EECCCE-EECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred eCCCCe-EEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEE
Confidence 344455 889999999999999974 678999986 3222 013567663321 24578999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEEEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
.++..+|+|.|.|.|.|..+.....+.|.|.
T Consensus 84 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~ 114 (344)
T 1za6_B 84 SSLRSEDTAVYFCTRSLNMAYWGQGTLVTVS 114 (344)
T ss_dssp CSCCGGGCEEEEEEETTTTCEECCCEEEEEC
T ss_pred CCCCcccCEEEEEEEecCcceecCcEEEEEe
Confidence 9999999999999999976655555666665
No 360
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.91 E-value=7.6e-10 Score=89.19 Aligned_cols=74 Identities=15% Similarity=0.086 Sum_probs=53.9
Q ss_pred EEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCC--eEEEEEccCCCCCCEEEEEEEEeCCce---EEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNG--QATLFINKMLDRDVGMYEALASNEHGT---ARQ 189 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~--~~~L~I~~~~~~D~G~Y~C~a~N~~G~---~~~ 189 (202)
.+.+|+++.|.|.+.|. ++|++++..+.. +... ...+ .+.|.|.++..+|+|.|+|.|.|..|. ...
T Consensus 11 ~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~--~~~~--~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 82 (289)
T 3mjg_X 11 VLNVSSTFVLTCSGSAP----VVWERMSQEPPQ--EMAK--AQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERK 82 (289)
T ss_dssp ECCTTCCEEEEEEESSC----CEEEBTTBCCSE--EEEE--CTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCE
T ss_pred EEeCCCcEEEEEeccce----EEEECCCCCccc--ceec--cCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEE
Confidence 78899999999999885 999999987732 2222 1122 368999999999999999999999987 445
Q ss_pred EEEEEee
Q psy5280 190 RVSSGNP 196 (202)
Q Consensus 190 ~~~L~V~ 196 (202)
.+.|.|.
T Consensus 83 ~~~v~v~ 89 (289)
T 3mjg_X 83 RLYIFVP 89 (289)
T ss_dssp EEEEECC
T ss_pred eEEEEEE
Confidence 5566554
No 361
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.90 E-value=1e-08 Score=83.21 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=60.1
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EEc---c--------------cCCcEEEEEe-eCCeEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--ELI---E--------------MGGRYDSSYT-RNGQATL 163 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~l---~--------------~~~r~~i~~~-~~~~~~L 163 (202)
.+..+... .+.+|+++.|.|.+.|.| .+.+.|+|++ ..+ . ...|+.+... .....+|
T Consensus 29 ~~~~p~~~-~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 107 (282)
T 1qok_A 29 KLQQSGAE-LVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYL 107 (282)
T ss_dssp EEEECCCE-EEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEE
T ss_pred EEECCCCE-EEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEE
Confidence 45566666 889999999999999985 6899999953 111 0 1356666332 1235789
Q ss_pred EEccCCCCCCEEEEEEEEeCCc
Q psy5280 164 FINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
.|.++..+|+|.|.|.+.|..|
T Consensus 108 ~I~~v~~~DsG~Y~C~~~n~~g 129 (282)
T 1qok_A 108 QLSSLTSEDTAVYYCNEGTPTG 129 (282)
T ss_dssp EECSCCGGGCEEEEEEEECSSS
T ss_pred EECcCChhhCEEEEEEeccCCC
Confidence 9999999999999999999977
No 362
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.90 E-value=4.1e-09 Score=84.87 Aligned_cols=93 Identities=11% Similarity=0.006 Sum_probs=67.4
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeec------CCceEEEeC--CEE---cc---------cCCcEEEEEeeCCeEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYP------KPKVSFYFN--DEL---IE---------MGGRYDSSYTRNGQAT 162 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P------~P~i~W~k~--g~~---l~---------~~~r~~i~~~~~~~~~ 162 (202)
.+.+...+.+. .+.+|+++.|.|.+.+.| .+.+.|+|+ +.. +. ...|+.+.. ......
T Consensus 5 ~~~v~q~p~~v-~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~ 82 (264)
T 2gjj_A 5 DIVLTQTPSSL-PVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSG-SGTDFT 82 (264)
T ss_dssp CCCEEEECSEE-EEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEE
T ss_pred ccceEecCCeE-EecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEec-CCCEEE
Confidence 34555666666 899999999999999988 689999985 221 11 135676632 345678
Q ss_pred EEEccCCCCCCEEEEEEEEeCCceE-EEEEEEEeec
Q psy5280 163 LFINKMLDRDVGMYEALASNEHGTA-RQRVSSGNPA 197 (202)
Q Consensus 163 L~I~~~~~~D~G~Y~C~a~N~~G~~-~~~~~L~V~~ 197 (202)
|.|.++..+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 118 (264)
T 2gjj_A 83 LTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKR 118 (264)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred EEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEc
Confidence 9999999999999999999986532 2234566654
No 363
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.90 E-value=1.7e-09 Score=83.41 Aligned_cols=72 Identities=21% Similarity=0.156 Sum_probs=56.6
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CEEcc------------cCCcEEEEEeeCCeEEEEEccCCCCCCEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DELIE------------MGGRYDSSYTRNGQATLFINKMLDRDVGM 175 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~l~------------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~ 175 (202)
+... .+.+|+++.|.|.+.|.|.|.+.|+|+ +..+. ...++.+.. ......|.|.++..+|+|.
T Consensus 6 p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~ 83 (212)
T 1nfd_E 6 PSSA-SVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST-SGTTATLTISGAQPEDEAA 83 (212)
T ss_dssp CSEE-EEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEETTCCGGGCSE
T ss_pred CCeE-EEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe-eCCEEEEEECcCCcccCEE
Confidence 5555 889999999999999999899999985 33221 135666633 3456789999999999999
Q ss_pred EEEEEEeC
Q psy5280 176 YEALASNE 183 (202)
Q Consensus 176 Y~C~a~N~ 183 (202)
|.|.|.|.
T Consensus 84 Y~C~~~n~ 91 (212)
T 1nfd_E 84 YYCLSSYG 91 (212)
T ss_dssp EEEEEEET
T ss_pred EEEEEEcc
Confidence 99999973
No 364
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.90 E-value=7.8e-10 Score=77.35 Aligned_cols=88 Identities=13% Similarity=0.030 Sum_probs=60.5
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
.|.+...+.. .+.+|++|+|.|.+.+.+ +.+.|+|++..+... +.. .......|.|.++..+|+|.|.|.+.|
T Consensus 5 kP~i~~~p~~--~v~~G~~VtL~C~~~~~~-~~~~w~k~g~~~~~~-~~~---~~~~~~~l~I~~v~~~dsG~Y~C~~~n 77 (105)
T 2vsd_A 5 QPSLSLHPSQ--GVSLGDTVTLRCHLPRMA-AWVQLWLNGTLRFDK-EKD---KEQDAAEFSFAVTNLEDAGTYQCRYQV 77 (105)
T ss_dssp CCEEEEESCS--SCCTTCEEEEEEECCSSC-EEEEEEETTEEEEEE-EEC---TTCSEEEEEEECCSGGGCEEEEEEEEE
T ss_pred CCEEEeCCCC--CcCcCCCEEEEEEcCCCC-cEEEEEECCccceee-ecc---CCCCEEEEEECCCCHHHCeEEEEEEEc
Confidence 4666544433 577999999999988753 578899999765321 111 113456899999999999999999999
Q ss_pred CCc----eEEEEEEEEeec
Q psy5280 183 EHG----TARQRVSSGNPA 197 (202)
Q Consensus 183 ~~G----~~~~~~~L~V~~ 197 (202)
... ..+..+.|.|..
T Consensus 78 ~~~~~~s~~Sdpl~L~V~~ 96 (105)
T 2vsd_A 78 SEPLWTSNQSDPVELVLTI 96 (105)
T ss_dssp ETTEEECCCCCCEEECCC-
T ss_pred CCCCcccCCCCCEEEEEEE
Confidence 653 123335565543
No 365
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.90 E-value=3.5e-10 Score=85.52 Aligned_cols=75 Identities=15% Similarity=0.185 Sum_probs=56.2
Q ss_pred eEEecCCeEEEEEEEEeecCCceEEEeCCEE--ccc------------CCcEEEEEe--eCCeEEEEEccCCCCCCEEEE
Q psy5280 114 QYGIKNENSSLFWFVYGYPKPKVSFYFNDEL--IEM------------GGRYDSSYT--RNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~--l~~------------~~r~~i~~~--~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
+.+.+|+++.|.|.+.+.|.+.+.|+|++.. +.. ..++.+... ..+...|.|.++..+|+|.|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 4788999999999999999999999999852 211 223333100 122456999999999999999
Q ss_pred EEEEeCCceEE
Q psy5280 178 ALASNEHGTAR 188 (202)
Q Consensus 178 C~a~N~~G~~~ 188 (202)
|.+.|..|...
T Consensus 85 C~~~~~~~~~~ 95 (184)
T 2ny1_B 85 CEVEDQKEEVQ 95 (184)
T ss_dssp EEETTEEEEEE
T ss_pred EEEEcCCCcEE
Confidence 99999876443
No 366
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.90 E-value=3.2e-09 Score=82.23 Aligned_cols=77 Identities=14% Similarity=0.222 Sum_probs=54.5
Q ss_pred ecCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEE--EEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 117 IKNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYD--SSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~--i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
..|+.+.|.|.+.|. |.| .|+|+|+|..+....... ......+ ...|.|..+...|+|.|+|.|.|......
T Consensus 127 ~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 127 LKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred ccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 358899999999994 555 899999999886541111 1000011 23789999999999999999999986654
Q ss_pred EEEEE
Q psy5280 189 QRVSS 193 (202)
Q Consensus 189 ~~~~L 193 (202)
....+
T Consensus 207 ~~~~i 211 (216)
T 2xzc_L 207 VTKSF 211 (216)
T ss_dssp EEEEE
T ss_pred eEEec
Confidence 44443
No 367
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.90 E-value=7.6e-09 Score=81.43 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=55.9
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEe--------------CCEEccc---CCcEEEEEeeCCeEEEEEccC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYF--------------NDELIEM---GGRYDSSYTRNGQATLFINKM 168 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k--------------~g~~l~~---~~r~~i~~~~~~~~~L~I~~~ 168 (202)
+...+... .+.+|+++.|.|.+.+ +.+.|.|+| ++..... ..|+.+.........|.|.++
T Consensus 5 v~~~p~~v-~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 5 VVQSPRHI-IKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CEEECSEE-EEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred cccCccee-eecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 44445555 8899999999999887 888999998 2222111 256666443344678999999
Q ss_pred CCCCCEEEEEEEEe
Q psy5280 169 LDRDVGMYEALASN 182 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N 182 (202)
..+|+|.|.|.+.+
T Consensus 83 ~~~D~G~Y~C~~~~ 96 (240)
T 3q5y_A 83 ELEDSAMYFCASSL 96 (240)
T ss_dssp CGGGCEEEEEEEES
T ss_pred ChhHCEEEEEEEcc
Confidence 99999999999983
No 368
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.90 E-value=6.9e-09 Score=81.26 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=58.2
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EE---c--------------ccCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--EL---I--------------EMGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~---l--------------~~~~r~~i~~~~-~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|.| .+.+.|+|+. .. + ....|+.+.... .....|.|
T Consensus 5 ~qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (225)
T 1op3_H 5 VESGGG-LVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQM 83 (225)
T ss_dssp EEECCE-EEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCe-EecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEE
Confidence 345555 889999999999999987 7889999852 21 1 013567663321 24578999
Q ss_pred ccCCCCCCEEEEEEEEeCCc
Q psy5280 166 NKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G 185 (202)
.++..+|+|.|.|.+.|..|
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~ 103 (225)
T 1op3_H 84 HKMRVEDTAIYYCARKGSDR 103 (225)
T ss_dssp CSCCGGGCEEEEEEEECCSS
T ss_pred CCCChhhCEEEEEEEecCCC
Confidence 99999999999999999875
No 369
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.90 E-value=1.2e-09 Score=76.81 Aligned_cols=85 Identities=14% Similarity=0.082 Sum_probs=60.1
Q ss_pred EEecCCeEEEEEEEEe-ecCCceEEEeCCEE--------c---------ccCCcEEEEEe-eCCeEEEEEccCCCCCCEE
Q psy5280 115 YGIKNENSSLFWFVYG-YPKPKVSFYFNDEL--------I---------EMGGRYDSSYT-RNGQATLFINKMLDRDVGM 175 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G-~P~P~i~W~k~g~~--------l---------~~~~r~~i~~~-~~~~~~L~I~~~~~~D~G~ 175 (202)
.+.+|+++.|.|.+.+ ...+.+.|+|.... + ....|+.+... .....+|.|.++..+|+|.
T Consensus 8 ~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~ 87 (116)
T 2or8_A 8 KGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDSGL 87 (116)
T ss_dssp EEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEE
T ss_pred EEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccCEE
Confidence 7889999999999876 34567999997521 1 01234443100 1234579999999999999
Q ss_pred EEEEEEeCCceE--EEEEEEEeecCC
Q psy5280 176 YEALASNEHGTA--RQRVSSGNPAQG 199 (202)
Q Consensus 176 Y~C~a~N~~G~~--~~~~~L~V~~~~ 199 (202)
|.|.+.+..+.. ...+.|.|....
T Consensus 88 Y~C~v~~~~~~~~~~~~~~l~V~p~~ 113 (116)
T 2or8_A 88 YCCRVEIPGWFNDQKVTFSLQVKPEL 113 (116)
T ss_dssp EEEEECCSSTTCCEEEEEEEEEECSC
T ss_pred EEEEEEcCCcccccEEEEEEEECCcc
Confidence 999999976543 677788777543
No 370
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.90 E-value=6.6e-09 Score=74.82 Aligned_cols=91 Identities=12% Similarity=0.087 Sum_probs=64.4
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec----CCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEcc
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP----KPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINK 167 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P----~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~ 167 (202)
+...+... .+.+|++|.|.|.+.+.+ .+.+.|+|.. ..+. ...|+.+. .......|.|.+
T Consensus 4 v~q~p~~v-~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~-~~~~~~sL~I~~ 81 (126)
T 4ffy_L 4 LTQSPASL-AVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGS-GSETDFTLTIDS 81 (126)
T ss_dssp EEEECSEE-EEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEE-EETTEEEEEESS
T ss_pred EEeCCCeE-EEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEe-cCCCEEEEEECC
Confidence 33444445 889999999999999887 5689999842 1111 13566664 334567899999
Q ss_pred CCCCCCEEEEEEEEeCCceE-EEEEEEEeecC
Q psy5280 168 MLDRDVGMYEALASNEHGTA-RQRVSSGNPAQ 198 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~G~~-~~~~~L~V~~~ 198 (202)
+..+|+|.|.|.+.|..... .....|.|...
T Consensus 82 v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~ 113 (126)
T 4ffy_L 82 VETDDAATYYCQQNNEDPYTFGGGTKLEIKGG 113 (126)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEEC-
T ss_pred CCHHHCEEEEEEEecCCCcEECCCEEEEEecC
Confidence 99999999999999865432 23467777654
No 371
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.89 E-value=7.8e-09 Score=82.57 Aligned_cols=76 Identities=8% Similarity=0.059 Sum_probs=60.1
Q ss_pred EEecCCeEEEEEEEEe-ecCC--ceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccC---CCCCCEE--EEEEEEeCCce
Q psy5280 115 YGIKNENSSLFWFVYG-YPKP--KVSFYFNDELIEMGGRYDSSYTRNGQATLFINKM---LDRDVGM--YEALASNEHGT 186 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G-~P~P--~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~---~~~D~G~--Y~C~a~N~~G~ 186 (202)
.+.+|+.+.|.|.+.| .|.| .++|+|++..+.. .+.. . ...|.+..+ ...|+|. |+|.|.|..|.
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~--~~~~----~-~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~ 86 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTY----G-NDSFSAKASVSVTAEDEGTQRLTCAVILGNQS 86 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC--EEEE----C-SSEEEEEEEEEECGGGCEEEEEEEEEEETTEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc--eEee----C-CCeEEEEeecccccccCCcceEEEEEecCCCC
Confidence 6789999999999999 8887 9999999998865 2211 1 224555544 7788885 99999999999
Q ss_pred EEEEEEEEeec
Q psy5280 187 ARQRVSSGNPA 197 (202)
Q Consensus 187 ~~~~~~L~V~~ 197 (202)
....+.|.|..
T Consensus 87 ~~~~~~l~V~~ 97 (265)
T 2oz4_A 87 QETLQTVTIYS 97 (265)
T ss_dssp EEEEEEEEEEC
T ss_pred cEEEEEEEEeC
Confidence 98889988864
No 372
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.89 E-value=7.2e-09 Score=81.85 Aligned_cols=69 Identities=9% Similarity=0.101 Sum_probs=49.1
Q ss_pred CCeEEEEEEEEee-c-CCceEEEeCCEEcccCCcEEE--EEe--------eC-C----eEEEEEccCCCCCCEEEEEEEE
Q psy5280 119 NENSSLFWFVYGY-P-KPKVSFYFNDELIEMGGRYDS--SYT--------RN-G----QATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 119 G~~v~L~C~v~G~-P-~P~i~W~k~g~~l~~~~r~~i--~~~--------~~-~----~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
+..+.|.|.+.|. | .+.|+|+|||..+........ ... .. + .+.|.|......|.|.|+|.|.
T Consensus 133 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~ 212 (231)
T 2w59_A 133 LSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAV 212 (231)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEE
T ss_pred cCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEE
Confidence 5679999999996 4 368999999999865432110 011 11 1 2457787777788999999999
Q ss_pred eCCceE
Q psy5280 182 NEHGTA 187 (202)
Q Consensus 182 N~~G~~ 187 (202)
|.....
T Consensus 213 n~~l~~ 218 (231)
T 2w59_A 213 HEALPM 218 (231)
T ss_dssp CTTSTT
T ss_pred cCCCCC
Confidence 988653
No 373
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.89 E-value=3.9e-09 Score=81.48 Aligned_cols=76 Identities=16% Similarity=0.106 Sum_probs=56.7
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEEcc----------------cCCcEEEEEee-CCeEEEEEc
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DELIE----------------MGGRYDSSYTR-NGQATLFIN 166 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~l~----------------~~~r~~i~~~~-~~~~~L~I~ 166 (202)
.++... .+.+|+++.|.|.+.|.| .+.+.|+|+ +..+. ...|+.+.... .....|.|.
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 83 (210)
T 3d9a_H 5 QESGPS-LVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLN 83 (210)
T ss_dssp EEESCS-EECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCE-EecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEEC
Confidence 345556 889999999999999976 489999985 22110 13567663321 234689999
Q ss_pred cCCCCCCEEEEEEEEeCC
Q psy5280 167 KMLDRDVGMYEALASNEH 184 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~ 184 (202)
++..+|+|.|.|.+.|..
T Consensus 84 ~v~~~D~G~Y~C~~~~~~ 101 (210)
T 3d9a_H 84 SVTTEDTATYYCANWDGD 101 (210)
T ss_dssp SCCGGGCEEEEEEETTSS
T ss_pred CCCcccCEEEEEEEecCc
Confidence 999999999999999864
No 374
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.89 E-value=2.7e-09 Score=73.88 Aligned_cols=82 Identities=12% Similarity=-0.017 Sum_probs=58.3
Q ss_pred EEecCCeEEEEEEEEeecCC---ceEEEeCCEE--------c---------ccCCcEEEEEe-eCCeEEEEEccCCCCCC
Q psy5280 115 YGIKNENSSLFWFVYGYPKP---KVSFYFNDEL--------I---------EMGGRYDSSYT-RNGQATLFINKMLDRDV 173 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P---~i~W~k~g~~--------l---------~~~~r~~i~~~-~~~~~~L~I~~~~~~D~ 173 (202)
.+.+|+++.|.|.+.+.+.+ .+.|++.... + ....++.+... .....+|.|.++..+|+
T Consensus 5 ~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~ 84 (109)
T 2oyp_A 5 KVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDDH 84 (109)
T ss_dssp EECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGGC
T ss_pred EEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChhC
Confidence 77899999999999876543 4899996521 0 01234443110 11235899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEee
Q psy5280 174 GMYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 174 G~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
|.|.|.+.|..+.....+.|.|.
T Consensus 85 G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 85 GTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp EEEEEEECCSSTTCCEEEEEEEE
T ss_pred eEEEEEEEcCCcccceEEEEEEE
Confidence 99999999988766666766664
No 375
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.89 E-value=2.8e-09 Score=82.89 Aligned_cols=70 Identities=13% Similarity=0.132 Sum_probs=53.7
Q ss_pred EecCCeEEEEEEEEee-cCC-ceEEEeCCEEcc----c----CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 116 GIKNENSSLFWFVYGY-PKP-KVSFYFNDELIE----M----GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~----~----~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
+.+|+.+.|.|.+.|. |.| .|+|++++..+. . ...+.+ .+.|.|..+...| |.|+|.|.|..|
T Consensus 137 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~~-g~Y~C~a~n~~~ 209 (220)
T 1pz5_B 137 DTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSL------SSLVTVPSSTWPS-QTVICNVAHPAS 209 (220)
T ss_dssp CSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEE------EEEEEECGGGTTT-SCCEEEEEEGGG
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEEE------EEEEEEcchhcCC-ceEEEEEEECCc
Confidence 4679999999999998 999 999999886311 0 122222 4678998888766 999999999999
Q ss_pred eEEEEEE
Q psy5280 186 TARQRVS 192 (202)
Q Consensus 186 ~~~~~~~ 192 (202)
.....+.
T Consensus 210 ~~~~~~~ 216 (220)
T 1pz5_B 210 KVDLIKE 216 (220)
T ss_dssp TEEEEEE
T ss_pred cEeeeec
Confidence 8766654
No 376
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.88 E-value=7.1e-09 Score=72.36 Aligned_cols=80 Identities=18% Similarity=0.155 Sum_probs=57.7
Q ss_pred EEecCCeEEEEEEEEeecCCc-----eEEEeCCEE-c---cc------------CCcEEEEEeeCCeEEEEEccCCCCCC
Q psy5280 115 YGIKNENSSLFWFVYGYPKPK-----VSFYFNDEL-I---EM------------GGRYDSSYTRNGQATLFINKMLDRDV 173 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~-----i~W~k~g~~-l---~~------------~~r~~i~~~~~~~~~L~I~~~~~~D~ 173 (202)
.+..|+++.|.|.+.+.|.+. +.|+|++.. + .. ..|+.+ ..+..+|.|.++..+|+
T Consensus 5 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~---~~~~~sL~I~~v~~~D~ 81 (110)
T 1ncn_A 5 QAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSF---DSDSWTLRLHNLQIKDK 81 (110)
T ss_dssp EEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEE---ETTTTEEEECSCCGGGC
T ss_pred EEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEE---ECCCEEEEEcCCChHHC
Confidence 778999999999998766553 999997531 1 00 123433 12357899999999999
Q ss_pred EEEEEEEEeCCceEEE-----EEEEEeec
Q psy5280 174 GMYEALASNEHGTARQ-----RVSSGNPA 197 (202)
Q Consensus 174 G~Y~C~a~N~~G~~~~-----~~~L~V~~ 197 (202)
|.|.|.+.|..+.... .+.|.|.|
T Consensus 82 G~Y~C~v~~~~~~~~~~~~~~~~~L~V~a 110 (110)
T 1ncn_A 82 GLYQCIIHHKKPTGMIRIHQMNSELSVLA 110 (110)
T ss_dssp EEEEEEEEEECSSSEEEEEEEEEEEEEEC
T ss_pred EEEEEEEEcCCCCceEEEEEEEEEEEEeC
Confidence 9999999998876543 34566643
No 377
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.88 E-value=2.9e-09 Score=84.75 Aligned_cols=92 Identities=14% Similarity=0.029 Sum_probs=65.2
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCC----ceEEEeC--CEEcc------------cCCcEEEEEeeCCeEEEEE
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKP----KVSFYFN--DELIE------------MGGRYDSSYTRNGQATLFI 165 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P----~i~W~k~--g~~l~------------~~~r~~i~~~~~~~~~L~I 165 (202)
|.+...+... .+.+|+++.|.|.+.|.|.| .+.|+|+ +..+. ...++.+. .......|.|
T Consensus 134 ~~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I 211 (253)
T 3uzq_A 134 LVMTQTPASL-AVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGS-GSRTDFTLTI 211 (253)
T ss_dssp CCEEEECSEE-EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEE
T ss_pred ceEECcCCeE-EEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEe-CCCCEEEEEE
Confidence 4455455555 88999999999999999887 9999984 22111 12455542 2344678999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEE-EEEEEEeec
Q psy5280 166 NKMLDRDVGMYEALASNEHGTAR-QRVSSGNPA 197 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~~-~~~~L~V~~ 197 (202)
.++..+|+|.|.|.|.|..+... ....|.|..
T Consensus 212 ~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~ 244 (253)
T 3uzq_A 212 NPVEADDVATYFCQRSNEVPWTFGGGTKLEIKR 244 (253)
T ss_dssp SSCCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred CCCCHHHCEEEEEEEccCCCcEECCCEEEEEcC
Confidence 99999999999999999765432 234566553
No 378
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.88 E-value=2e-08 Score=72.72 Aligned_cols=78 Identities=17% Similarity=0.185 Sum_probs=58.8
Q ss_pred EeccCCeeEEecCCeEEEEEEEEee--cCCceEEEeC--CE----EcccCCcEEEEEee-CCeEEEEEccCCCCCCEEEE
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFN--DE----LIEMGGRYDSSYTR-NGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~--g~----~l~~~~r~~i~~~~-~~~~~L~I~~~~~~D~G~Y~ 177 (202)
...+... .+.+|+++.|.|.+.+. +.+.+.|++. +. .+...+|+.+.... .....|.|.++..+|+|.|.
T Consensus 4 ~Q~p~~v-~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 82 (126)
T 3moq_A 4 DQTPRTA-TKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYK 82 (126)
T ss_dssp EEECSEE-EEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred EECCceE-EEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEE
Confidence 3444455 88999999999999876 5667999983 22 33345677664332 34678999999999999999
Q ss_pred EEEEeCCc
Q psy5280 178 ALASNEHG 185 (202)
Q Consensus 178 C~a~N~~G 185 (202)
|.+.|..+
T Consensus 83 C~~~~~~~ 90 (126)
T 3moq_A 83 CQAFYVFF 90 (126)
T ss_dssp EEEEEEEE
T ss_pred EEEEEcCC
Confidence 99998765
No 379
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.88 E-value=4.7e-09 Score=84.13 Aligned_cols=91 Identities=11% Similarity=-0.008 Sum_probs=62.6
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CEE------------ccc----CCcEEEEEeeCCeEEEEE
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DEL------------IEM----GGRYDSSYTRNGQATLFI 165 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~------------l~~----~~r~~i~~~~~~~~~L~I 165 (202)
+.++..+... .+.+|+++.|.|.+. .+.+.+.|+|. +.. ... ..|+.+.........|.|
T Consensus 27 ~~v~~~p~~v-~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 27 AGVSQTPSNK-VTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp SSCBCCCSEE-EEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred ceeEeCCCEE-EecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 4444445555 889999999999986 57889999982 211 111 156666332233678999
Q ss_pred ccCCCCCCEEEEEEEEeC--CceEEEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNE--HGTARQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~--~G~~~~~~~L~V~ 196 (202)
.++..+|+|.|.|.+.|. .+.....+.|.|.
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 137 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVL 137 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEe
Confidence 999999999999999983 3333334455554
No 380
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.88 E-value=6e-09 Score=84.32 Aligned_cols=80 Identities=10% Similarity=0.059 Sum_probs=61.2
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--E---Ec-----------c---cCCcEEEEEeeCCeEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--E---LI-----------E---MGGRYDSSYTRNGQATL 163 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~---~l-----------~---~~~r~~i~~~~~~~~~L 163 (202)
.+.++..+... .+.+|+++.|.|.+.+.|.+.+.|+|+. . .+ . ...|+.+........+|
T Consensus 24 ~~~v~~~p~~v-~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL 102 (279)
T 2wbj_D 24 GAVVSQHPSWV-ISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTL 102 (279)
T ss_dssp CCCEEEECSEE-EEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEE
T ss_pred cceEEeCCCeE-EecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEE
Confidence 45566666666 8999999999999998888999999863 1 11 0 13567664323346789
Q ss_pred EEccCCCCCCEEEEEEEEeC
Q psy5280 164 FINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.|.++..+|+|.|.|.+.|.
T Consensus 103 ~I~~v~~~D~G~Y~C~~~~~ 122 (279)
T 2wbj_D 103 TVTSAHPEDSSFYICSARDL 122 (279)
T ss_dssp EESSCCGGGCEEEEEEEEET
T ss_pred EEccCCccCCEEEEEEEccc
Confidence 99999999999999999994
No 381
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.87 E-value=2.9e-09 Score=81.60 Aligned_cols=80 Identities=15% Similarity=0.060 Sum_probs=56.3
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCc---eEEEeCCEEccc----------------CCcEEEE------EeeCCeEEEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPK---VSFYFNDELIEM----------------GGRYDSS------YTRNGQATLF 164 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~---i~W~k~g~~l~~----------------~~r~~i~------~~~~~~~~L~ 164 (202)
+.+. .+..|+++.|.|.+.|.|.+. |+|+|++..+.. ..+.... ......++|.
T Consensus 8 p~~V-~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~ 86 (225)
T 4fmk_A 8 LPEV-RGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLA 86 (225)
T ss_dssp CSEE-EEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEE
T ss_pred CCEE-EEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEE
Confidence 3344 788999999999999988774 799998643311 1111110 0012346799
Q ss_pred EccCCCCCCEEEEEEEEeCCceEEEE
Q psy5280 165 INKMLDRDVGMYEALASNEHGTARQR 190 (202)
Q Consensus 165 I~~~~~~D~G~Y~C~a~N~~G~~~~~ 190 (202)
|.++..+|+|.|.|.|.|..|.....
T Consensus 87 I~~v~~~D~G~Y~C~~~~~~~~~~~~ 112 (225)
T 4fmk_A 87 FRGLRVEDEGNYTCEFATFPNGTRRG 112 (225)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEE
T ss_pred EccCCHHHCcceEEEEEeCCCcceee
Confidence 99999999999999999988865544
No 382
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.87 E-value=8.9e-09 Score=72.33 Aligned_cols=77 Identities=14% Similarity=0.104 Sum_probs=58.0
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCCCC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKMLDR 171 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~ 171 (202)
+...+... .+.+|++|.|.|.+.+.+.+.+.|++.. ..|. ...|+.+.. ......|.|.++..+
T Consensus 7 v~q~p~~~-~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~~~ 84 (111)
T 1i3g_L 7 LTQSHKFM-STSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSG-SGTDFTLTISNVQSE 84 (111)
T ss_dssp EEESCSEE-ECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGG
T ss_pred EEEeCCEE-EEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc-CCCEEEEEECCCCHH
Confidence 33445454 8889999999999998888899999853 1221 135666633 345678999999999
Q ss_pred CCEEEEEEEEeCC
Q psy5280 172 DVGMYEALASNEH 184 (202)
Q Consensus 172 D~G~Y~C~a~N~~ 184 (202)
|+|.|.|.+.|..
T Consensus 85 DsG~Y~C~~~~~~ 97 (111)
T 1i3g_L 85 DLADYFCQQYSSY 97 (111)
T ss_dssp GCSEEEEEECSSS
T ss_pred HCEEEEEEEecCC
Confidence 9999999998863
No 383
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.87 E-value=4.2e-09 Score=81.52 Aligned_cols=85 Identities=13% Similarity=-0.019 Sum_probs=59.9
Q ss_pred cCCeeEEecCCeEEEEEEEE-eec-CCceEEEeCC--EEc------------ccCCcEEEEEeeCCeEEEEEccCCCCCC
Q psy5280 110 EHDTQYGIKNENSSLFWFVY-GYP-KPKVSFYFND--ELI------------EMGGRYDSSYTRNGQATLFINKMLDRDV 173 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~-G~P-~P~i~W~k~g--~~l------------~~~~r~~i~~~~~~~~~L~I~~~~~~D~ 173 (202)
+.+. .+.+|+++.|.|.+. +.+ .+.|.|+|++ ..+ ....++.+.. ......|.|.++..+|+
T Consensus 7 p~~~-~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~ 84 (216)
T 2xzc_L 7 PPSV-SAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK-SGTSATLGITGLQTGDE 84 (216)
T ss_dssp CSEE-EECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-ETTEEEEEECSCCGGGC
T ss_pred CCcE-EecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec-cCCEEEEEECCCCcccC
Confidence 4444 889999999999964 443 5799999853 111 0134666532 34567899999999999
Q ss_pred EEEEEEEEeCCc--eEEEEEEEEee
Q psy5280 174 GMYEALASNEHG--TARQRVSSGNP 196 (202)
Q Consensus 174 G~Y~C~a~N~~G--~~~~~~~L~V~ 196 (202)
|.|.|.|.|..| .....+.|.|.
T Consensus 85 G~Y~C~~~~~~~~~~~~~~~~l~V~ 109 (216)
T 2xzc_L 85 ADYYCGTWDSSLNPVFGGGTKLEIK 109 (216)
T ss_dssp EEEEEEEECTTSCEEEBCCEEEEEC
T ss_pred EEEEEEEEeCCCcceECCCEEEEEc
Confidence 999999999887 22223455554
No 384
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.87 E-value=4.3e-09 Score=90.14 Aligned_cols=70 Identities=11% Similarity=0.058 Sum_probs=47.7
Q ss_pred ecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 117 IKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
.+|+.+.|.|.+.|.+++ .|+|+|+|..+.............+ ...|.|......|.|.|+|.|.|....
T Consensus 349 ~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 349 MAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp SSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred hcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 357789999999996543 8999999988743211110000111 235677777777899999999998754
No 385
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.86 E-value=1.1e-08 Score=79.03 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=44.9
Q ss_pred cCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEEEEEeeCCe----EEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 118 KNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYDSSYTRNGQ----ATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 118 ~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~----~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
.|..+.|.|.+.|. |.+ .|+|+|+|..+.............+. ..|.|......|.|.|+|.|.|....
T Consensus 123 ~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 123 TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp GSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred cCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 46679999999996 443 89999999987632111111111111 23445554456799999999998754
No 386
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.86 E-value=7.1e-09 Score=82.43 Aligned_cols=91 Identities=15% Similarity=0.116 Sum_probs=64.1
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEE---c--------------ccCCcEEEEEee-CCeEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DEL---I--------------EMGGRYDSSYTR-NGQATL 163 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~---l--------------~~~~r~~i~~~~-~~~~~L 163 (202)
++..+.+. .+.+|+++.|.|.+.|.+ .+.+.|+|. +.. + ....|+.+.... .....|
T Consensus 4 ~~~~p~~~-~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 82 (253)
T 3uzq_A 4 LLEQSGAE-LVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYL 82 (253)
T ss_dssp CEEECCCE-EECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEE
T ss_pred eEecCCCe-eecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEE
Confidence 34455566 889999999999999854 789999982 211 1 113566663322 235679
Q ss_pred EEccCCCCCCEEEEEEEEeCCceE-EEEEEEEeec
Q psy5280 164 FINKMLDRDVGMYEALASNEHGTA-RQRVSSGNPA 197 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~~G~~-~~~~~L~V~~ 197 (202)
.|.++..+|+|.|.|.|.|..+.. ...+.|.|..
T Consensus 83 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~ 117 (253)
T 3uzq_A 83 HLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSA 117 (253)
T ss_dssp EECSCCGGGCEEEEEEECSSSCCEECCCEEEEECS
T ss_pred EeCCCCcccCEEEEEEEeeCCccEECCCcEEEEec
Confidence 999999999999999999976654 2345666653
No 387
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.86 E-value=3.4e-09 Score=80.81 Aligned_cols=81 Identities=16% Similarity=0.140 Sum_probs=57.0
Q ss_pred ccCCeeEEecCCeEEEEEEEEeecCCc---eEEEeCCEEcccC------------------CcEEEEE--eeCCeEEEEE
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYPKPK---VSFYFNDELIEMG------------------GRYDSSY--TRNGQATLFI 165 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P~P~---i~W~k~g~~l~~~------------------~r~~i~~--~~~~~~~L~I 165 (202)
.+.+. ++.+|+++.|.|.+.|.|.+. |+|+|++..+... .++.+.. .....++|.|
T Consensus 5 ~p~~v-tv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 5 TSDVV-TVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp CCSEE-EEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred CCCeE-EEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 34444 889999999999999998774 8999987543221 1111100 0112357999
Q ss_pred ccCCCCCCEEEEEEEEeCCceEEEE
Q psy5280 166 NKMLDRDVGMYEALASNEHGTARQR 190 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~~~~ 190 (202)
.++..+|+|.|.|.+.|..+.....
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~ 108 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQA 108 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEE
T ss_pred eeccHHHCCceeEEEEeccCceeee
Confidence 9999999999999999877655433
No 388
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.86 E-value=3.7e-09 Score=81.57 Aligned_cols=76 Identities=11% Similarity=0.036 Sum_probs=53.6
Q ss_pred EEecCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEEEEEee--CCeEEEEEccCCCCCCEEEEEEEEeCCceEEEE
Q psy5280 115 YGIKNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYDSSYTR--NGQATLFINKMLDRDVGMYEALASNEHGTARQR 190 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~i~~~~--~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~ 190 (202)
.+.+|+.+.|.|.+.|. |.| .++|++++..+.......+.... .....|.|..+...| |.|+|.|.|..|.....
T Consensus 129 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 129 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp SCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 34679999999999998 888 99999998754311000010000 013568998888867 99999999999987544
Q ss_pred E
Q psy5280 191 V 191 (202)
Q Consensus 191 ~ 191 (202)
.
T Consensus 208 ~ 208 (210)
T 3d9a_H 208 K 208 (210)
T ss_dssp E
T ss_pred c
Confidence 3
No 389
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.86 E-value=7.8e-09 Score=73.29 Aligned_cols=88 Identities=13% Similarity=0.139 Sum_probs=58.8
Q ss_pred cCCeeEEecCCeEEEEEEEEee----cCCceEEEeCCE------Ecc--------------cCCcEEEEEe-eCCeEEEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGY----PKPKVSFYFNDE------LIE--------------MGGRYDSSYT-RNGQATLF 164 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~----P~P~i~W~k~g~------~l~--------------~~~r~~i~~~-~~~~~~L~ 164 (202)
+... .+.+|+++.|.|.+.+. +.+.+.|++++. .+. -..|+.+... .....+|.
T Consensus 6 ~~~v-~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (124)
T 1neu_A 6 DREV-YGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIV 84 (124)
T ss_dssp CSEE-EEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEE
T ss_pred CCeE-EEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEE
Confidence 3444 88999999999998753 467899998532 010 0234444100 11346899
Q ss_pred EccCCCCCCEEEEEEEEeCCce--EEEEEEEEeecC
Q psy5280 165 INKMLDRDVGMYEALASNEHGT--ARQRVSSGNPAQ 198 (202)
Q Consensus 165 I~~~~~~D~G~Y~C~a~N~~G~--~~~~~~L~V~~~ 198 (202)
|.++..+|+|.|.|.+.+..+. ....+.|.|.+.
T Consensus 85 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~ 120 (124)
T 1neu_A 85 IHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEK 120 (124)
T ss_dssp ECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC-
T ss_pred EccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecC
Confidence 9999999999999999998875 467788888764
No 390
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.86 E-value=2e-09 Score=82.85 Aligned_cols=72 Identities=8% Similarity=-0.094 Sum_probs=52.4
Q ss_pred EecCCeEEEEEEEEee----cCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEE
Q psy5280 116 GIKNENSSLFWFVYGY----PKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRV 191 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~----P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~ 191 (202)
+.+|+.+.|.|.+.|. |.|.++|++++..+.... . ...+.|.|..+...|.|.|+|.|.|..+......
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~~-~------~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~ 207 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPE-T------TRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTER 207 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCSS-C------CCSSEEEECCCTTCCSCEEEEEEECC----CCEE
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCCC-c------eeEEEEEEecccHHcCcEEEEEEEeCCCCcceEE
Confidence 4589999999999874 889999999986543221 1 2356899999999999999999999876544444
Q ss_pred EEE
Q psy5280 192 SSG 194 (202)
Q Consensus 192 ~L~ 194 (202)
.+.
T Consensus 208 ~v~ 210 (214)
T 2zg1_A 208 TVQ 210 (214)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 391
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.86 E-value=7e-09 Score=82.44 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=61.8
Q ss_pred ccCCeeEEecCCeEEEEEEEEee--cCCceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEEEEccCCCCC
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFND--E---LIE---------MGGRYDSSYTRNGQATLFINKMLDRD 172 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~D 172 (202)
.+... .+.+|+++.|.|.+.|. |.+.+.|+|+. . .+. ...++.+.. ......|.|.++..+|
T Consensus 8 ~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D 85 (256)
T 3ux9_B 8 QPPSV-SGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSK-SGTSASLAITGLQSED 85 (256)
T ss_dssp CCSEE-EECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-ETTEEEEEECSCCGGG
T ss_pred cCCcE-EEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEc-cCCEEEEEECCCChhh
Confidence 34444 88999999999999988 78899999842 1 111 234666632 3446789999999999
Q ss_pred CEEEEEEEEeCCce---EEEEEEEEeec
Q psy5280 173 VGMYEALASNEHGT---ARQRVSSGNPA 197 (202)
Q Consensus 173 ~G~Y~C~a~N~~G~---~~~~~~L~V~~ 197 (202)
+|.|.|.+.|..+. ....+.|.|..
T Consensus 86 sG~Y~C~~~~~~~~~~~~~~~~~l~V~~ 113 (256)
T 3ux9_B 86 EADYYCQVRDNNENEWVFGGGTKLTVLG 113 (256)
T ss_dssp CEEEEEEEEETTTTEEEECCCEEEEEC-
T ss_pred CEEEEEEEEECCCCceEECCCEEEEEEC
Confidence 99999999997653 22334555543
No 392
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.85 E-value=1.4e-08 Score=71.75 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=56.3
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--E----EcccCCcEEEEEe-eCCeEEEEEccCCCCCCEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--E----LIEMGGRYDSSYT-RNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~----~l~~~~r~~i~~~-~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
..+... .+.+|++|.|.|.+.+.+ .+.+.|+++. . .+....|+.+... ......|.|.++..+|+|.|.|
T Consensus 5 q~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C 83 (113)
T 1sq2_N 5 QTPRSV-TKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRC 83 (113)
T ss_dssp EECSEE-EECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred eCCccE-EEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEE
Confidence 344555 889999999999998876 5689999852 2 2223467765332 2345789999999999999999
Q ss_pred EEEeC
Q psy5280 179 LASNE 183 (202)
Q Consensus 179 ~a~N~ 183 (202)
.+.|.
T Consensus 84 ~~~~~ 88 (113)
T 1sq2_N 84 GLGVA 88 (113)
T ss_dssp EECBT
T ss_pred EEEeC
Confidence 99883
No 393
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.84 E-value=2.3e-08 Score=79.21 Aligned_cols=80 Identities=15% Similarity=0.235 Sum_probs=58.8
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEee--cCCceEEEeCC--E---Ecc--------------cCCcEEEEEeeC-CeE
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFND--E---LIE--------------MGGRYDSSYTRN-GQA 161 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~g--~---~l~--------------~~~r~~i~~~~~-~~~ 161 (202)
..+...+... .+.+|+++.|.|.+.+. +.+.+.|+|+. . .+. ...|+.+..... ...
T Consensus 2 ~~v~q~p~~v-~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 80 (242)
T 1hxm_B 2 GHLEQPQISS-TKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTS 80 (242)
T ss_dssp CEEECCCSEE-EEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEE
T ss_pred CccCcCCceE-EecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEE
Confidence 3444445555 88999999999999986 67899999842 1 111 245666633221 467
Q ss_pred EEEEccCCCCCCEEEEEEEEeCC
Q psy5280 162 TLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 162 ~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
.|.|.++..+|+|.|.|.+.|..
T Consensus 81 ~L~I~~v~~~D~G~Y~C~~~~~~ 103 (242)
T 1hxm_B 81 TLTIHNVEKQDIATYYCALWEAQ 103 (242)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEC
T ss_pred EEEECCCCcccCEEEEEeeecCC
Confidence 89999999999999999999863
No 394
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.84 E-value=2.7e-09 Score=84.96 Aligned_cols=90 Identities=12% Similarity=0.079 Sum_probs=60.6
Q ss_pred EEeccCCeeEEecCCeEEEEEEEE---eecCCceEEEeCCEEccc------------------CCcEEEEE-eeCCeEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVY---GYPKPKVSFYFNDELIEM------------------GGRYDSSY-TRNGQATL 163 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~---G~P~P~i~W~k~g~~l~~------------------~~r~~i~~-~~~~~~~L 163 (202)
+...+.+. .+.+|+++.|.|.+. |.|.+.|.|+|++..... ..++.+.. ....+..|
T Consensus 8 v~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 86 (268)
T 3mj6_A 8 LTVSSPQL-RVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSL 86 (268)
T ss_dssp ----CCEE-EEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCE
T ss_pred cccCCCce-EEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEE
Confidence 33344444 889999999999998 788889999996542211 13333300 00123679
Q ss_pred EEccCCCCCCEEEEEEEEeCCceE--EEEEEEEee
Q psy5280 164 FINKMLDRDVGMYEALASNEHGTA--RQRVSSGNP 196 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~~G~~--~~~~~L~V~ 196 (202)
.|.++..+|+|.|+|.|.|..+.. ...+.|.|.
T Consensus 87 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 87 LLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred EECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 999999999999999999976544 445566553
No 395
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=3.9e-08 Score=71.39 Aligned_cols=93 Identities=14% Similarity=0.136 Sum_probs=61.3
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEee-cCCceEEEeCCE----EcccC-----CcEEEEEe----eCCeEEEEEccCCCC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGY-PKPKVSFYFNDE----LIEMG-----GRYDSSYT----RNGQATLFINKMLDR 171 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~-P~P~i~W~k~g~----~l~~~-----~r~~i~~~----~~~~~~L~I~~~~~~ 171 (202)
+...+... .+.+|++|.|.|.+.+. +.+.+.|+|+.. .+... .|+..... ......|.|.++..+
T Consensus 11 v~q~p~~~-~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 89 (136)
T 2d9c_A 11 VIQPEKSV-SVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPA 89 (136)
T ss_dssp EECCCSEE-EEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTT
T ss_pred EEecCcEE-EEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHH
Confidence 33334444 88999999999999876 667899999751 11111 12221000 012467999999999
Q ss_pred CCEEEEEEEEeCCc--eEE----EEEEEEeecCC
Q psy5280 172 DVGMYEALASNEHG--TAR----QRVSSGNPAQG 199 (202)
Q Consensus 172 D~G~Y~C~a~N~~G--~~~----~~~~L~V~~~~ 199 (202)
|+|.|.|.+.|..+ ... ..+.|.|.+..
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~ 123 (136)
T 2d9c_A 90 DAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKP 123 (136)
T ss_dssp TCEEEEEEEEECCSSSCEEEEECCCEEEEEECCC
T ss_pred HCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCC
Confidence 99999999998653 111 34677777653
No 396
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.83 E-value=2.3e-08 Score=78.21 Aligned_cols=70 Identities=13% Similarity=0.237 Sum_probs=54.0
Q ss_pred EecCCeEEEEEEEEee-cCC-ceEEEe-CCEEccc---------CCcEEEEEeeCCeEEEEEccCCC--CCCEEEEEEEE
Q psy5280 116 GIKNENSSLFWFVYGY-PKP-KVSFYF-NDELIEM---------GGRYDSSYTRNGQATLFINKMLD--RDVGMYEALAS 181 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~-P~P-~i~W~k-~g~~l~~---------~~r~~i~~~~~~~~~L~I~~~~~--~D~G~Y~C~a~ 181 (202)
+.+|+.+.|.|.+.|. |.| .|+|++ +|..+.. +..+.+ ...|.|..... .|.|.|+|.|.
T Consensus 138 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~~~d~g~y~C~v~ 211 (223)
T 1dee_B 138 SNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAA------TSQVLLPSKDVAQGTNEHVVCKVQ 211 (223)
T ss_dssp CCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEE------EEEEEEECTTTTSTTCCEEEEEEE
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEE------EEEEEEcHHHhccCCCCEEEEEEE
Confidence 3579999999999998 877 899999 8887753 112222 34688877765 78899999999
Q ss_pred eCCceEEEEE
Q psy5280 182 NEHGTARQRV 191 (202)
Q Consensus 182 N~~G~~~~~~ 191 (202)
|..|......
T Consensus 212 n~~~~~~~~~ 221 (223)
T 1dee_B 212 HPNGNKEKDV 221 (223)
T ss_dssp CTTCCEEEEE
T ss_pred eCCCCCcccc
Confidence 9999876544
No 397
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.83 E-value=1.3e-08 Score=78.21 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=62.9
Q ss_pred EeccCCeeEEecCCeEEEEEEEEee-------cCCceEEEeCCEE------cc-----------cCCcEEEEEe-eCCeE
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGY-------PKPKVSFYFNDEL------IE-----------MGGRYDSSYT-RNGQA 161 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~-------P~P~i~W~k~g~~------l~-----------~~~r~~i~~~-~~~~~ 161 (202)
+..+.+. .+.+|+++.|.|.+.+. +.+.+.|+|++.. +. ...|+.+... .....
T Consensus 4 ~~~p~~v-~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 82 (214)
T 2zg1_A 4 LQVQKSV-TVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNC 82 (214)
T ss_dssp EECCSEE-EEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBC
T ss_pred eeCCcEE-EEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeE
Confidence 3345555 88999999999999864 5778999998752 11 1245555111 11245
Q ss_pred EEEEccCCCCCCEEEEEEEEeCCceEE----EEEEEEeec
Q psy5280 162 TLFINKMLDRDVGMYEALASNEHGTAR----QRVSSGNPA 197 (202)
Q Consensus 162 ~L~I~~~~~~D~G~Y~C~a~N~~G~~~----~~~~L~V~~ 197 (202)
+|.|.++..+|+|.|.|.+.|..+... ..+.|.|.+
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 122 (214)
T 2zg1_A 83 SLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTA 122 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEEC
T ss_pred EEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEec
Confidence 799999999999999999999874332 246666654
No 398
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.83 E-value=4.7e-09 Score=73.38 Aligned_cols=81 Identities=15% Similarity=0.123 Sum_probs=60.6
Q ss_pred eEEecCCeEEEEEEE-EeecCCceEEEeCC-EEcc------------c--CCcEEEEEeeCCeEEEEEccCCCCCCEEEE
Q psy5280 114 QYGIKNENSSLFWFV-YGYPKPKVSFYFND-ELIE------------M--GGRYDSSYTRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v-~G~P~P~i~W~k~g-~~l~------------~--~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
..+.+|+++.|.|.+ .+.+.+.+.|++.. ..+. . ..|+.+. .....|.|.++..+|+|.|.
T Consensus 13 v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~---~~~~sL~I~~v~~~DsG~Y~ 89 (110)
T 2ptt_A 13 INAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLE---ENNGALHISNVRKEDKGTYY 89 (110)
T ss_dssp EEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEEC---TTTCCEEESSCCGGGCEEEE
T ss_pred EEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEe---CCCccEEECCCCcccCeEEE
Confidence 388899999999998 77888899999942 2121 0 1355551 14578999999999999999
Q ss_pred EEEEeCCceEEEEEEEEeecC
Q psy5280 178 ALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 178 C~a~N~~G~~~~~~~L~V~~~ 198 (202)
|.+.+.. .....+.|.|..+
T Consensus 90 C~v~~~~-~~~~~~~L~V~dp 109 (110)
T 2ptt_A 90 MRVLRET-ENELKITLEVFDP 109 (110)
T ss_dssp EEEESSS-BCCEEEEEEEECC
T ss_pred EEEEcCC-CcEEEEEEEEEcc
Confidence 9998876 3445778887653
No 399
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.83 E-value=9.6e-09 Score=80.61 Aligned_cols=76 Identities=14% Similarity=0.075 Sum_probs=57.5
Q ss_pred ccCCeeEEecCCeEEEEEEEEeecC----CceEEEeC--CEEc---c-------------cCCcEEEEEee-CCeEEEEE
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYPK----PKVSFYFN--DELI---E-------------MGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P~----P~i~W~k~--g~~l---~-------------~~~r~~i~~~~-~~~~~L~I 165 (202)
++... .+.+|+++.|.|.+.|.|. +.+.|+|+ +..+ . ...|+.+.... .....|.|
T Consensus 6 qp~~~-~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (228)
T 3bae_H 6 ESGPG-LLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKI 84 (228)
T ss_dssp EECCS-EECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEE
T ss_pred CCCce-eecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEE
Confidence 45555 8899999999999999875 89999984 2211 0 13466663322 23578999
Q ss_pred ccCCCCCCEEEEEEEEeCCc
Q psy5280 166 NKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G 185 (202)
.++..+|+|.|.|.+.|..|
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 85 TSVDTADTATYYCARRGFYG 104 (228)
T ss_dssp CSCCGGGCEEEEEEEEEEST
T ss_pred cCCCcccCEEEEEEEecCCC
Confidence 99999999999999999875
No 400
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.83 E-value=9.2e-09 Score=80.02 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=57.3
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EE---cc----------------cCCcEEEEEee-CCeEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--EL---IE----------------MGGRYDSSYTR-NGQATL 163 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~---l~----------------~~~r~~i~~~~-~~~~~L 163 (202)
.++... .+.+|+++.|.|.+.|.| .+.+.|+|+. .. +. ...|+.+.... .....|
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 83 (222)
T 1q9r_B 5 VESGGG-LVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYL 83 (222)
T ss_dssp EEECCC-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEE
T ss_pred ecCCce-eEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEE
Confidence 344555 788999999999999876 7899999852 11 10 12566663322 235689
Q ss_pred EEccCCCCCCEEEEEEEEeCCc
Q psy5280 164 FINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
.|.++..+|+|.|.|.+.|..|
T Consensus 84 ~I~~v~~~D~G~Y~C~~~~~~~ 105 (222)
T 1q9r_B 84 QMNTLRAEDSATYYCARDHDGY 105 (222)
T ss_dssp EECSCCGGGCEEEEEEECCCSS
T ss_pred EECcCCcccCeEEEEEEeccCC
Confidence 9999999999999999999765
No 401
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.83 E-value=3e-09 Score=83.11 Aligned_cols=85 Identities=11% Similarity=0.030 Sum_probs=58.9
Q ss_pred CCeEEeccCCeeE-EecCCeEEEEEEEEeec---C-CceEEEeCCEEcccCCcEEEEEeeC----CeEEEEEccCCCCCC
Q psy5280 103 APRFLNQEHDTQY-GIKNENSSLFWFVYGYP---K-PKVSFYFNDELIEMGGRYDSSYTRN----GQATLFINKMLDRDV 173 (202)
Q Consensus 103 ~P~fi~~~~~~~~-v~~G~~v~L~C~v~G~P---~-P~i~W~k~g~~l~~~~r~~i~~~~~----~~~~L~I~~~~~~D~ 173 (202)
+|.+...+..... +.+|+++.|.|.+.|.+ . +.|+|+|++..+............. ....|.|.++...|+
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 88 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSG 88 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCC
Confidence 4554333434312 77899999999999984 3 7899999998775322111000000 135799999999999
Q ss_pred EEEEEEEEeCCceE
Q psy5280 174 GMYEALASNEHGTA 187 (202)
Q Consensus 174 G~Y~C~a~N~~G~~ 187 (202)
|.|+|.|.|..+..
T Consensus 89 g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 89 KEFKCKVNNKDLPS 102 (218)
T ss_dssp CCEEEEEEETTCSS
T ss_pred CeEEEEEECCcCCC
Confidence 99999999998754
No 402
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.83 E-value=5.1e-09 Score=84.18 Aligned_cols=81 Identities=15% Similarity=0.135 Sum_probs=61.4
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeec-----CCceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYP-----KPKVSFYFND--E---LIE---------MGGRYDSSYTRNGQATL 163 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P-----~P~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L 163 (202)
.+.+...+.+. .+.+|+++.|.|.+.+.+ .+.+.|+|+. . .+. ...|+.+.. ......|
T Consensus 15 ~~~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L 92 (268)
T 1x9q_A 15 DVVMTQTPLSL-PVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSG-SGTDFTL 92 (268)
T ss_dssp CCCEEEECSEE-CCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEE
T ss_pred cceEEeeCCeE-EecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEc-CCCEEEE
Confidence 34555556665 788999999999999988 5899999852 2 111 135676632 3456789
Q ss_pred EEccCCCCCCEEEEEEEEeCCc
Q psy5280 164 FINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
.|.++..+|+|.|.|.+.|..+
T Consensus 93 ~I~~v~~~DsG~Y~C~~~~~~~ 114 (268)
T 1x9q_A 93 KINRVEAEDLGVYFCSQSTHVP 114 (268)
T ss_dssp EESSCCGGGCEEEEEEECSSSS
T ss_pred EECCCChhHCEEEEEEEecCCC
Confidence 9999999999999999999865
No 403
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.83 E-value=3.5e-09 Score=82.78 Aligned_cols=84 Identities=12% Similarity=0.031 Sum_probs=60.8
Q ss_pred cCCeeEEecCCeEEEEEEEEeecC-C-ceEEEeCC--EEc------------ccCCcEEEEEeeCCeEEEEEccCCCCCC
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPK-P-KVSFYFND--ELI------------EMGGRYDSSYTRNGQATLFINKMLDRDV 173 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~-P-~i~W~k~g--~~l------------~~~~r~~i~~~~~~~~~L~I~~~~~~D~ 173 (202)
+... .+.+|+++.|.|.+.|.+. + .+.|+|+. ..+ ....++.+.. ......|.|.++..+|+
T Consensus 26 p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~ 103 (234)
T 2j6e_L 26 PPSA-SGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK-SGTSASLAISGLRSEDE 103 (234)
T ss_dssp CSCC-CBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE-ETTEEEEEEESCCSTTC
T ss_pred CCcE-EeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe-cCCeEEEEECCCCHHHC
Confidence 5555 7889999999999998654 4 69999863 211 0134666533 34567899999999999
Q ss_pred EEEEEEEEeCCce---EEEEEEEEe
Q psy5280 174 GMYEALASNEHGT---ARQRVSSGN 195 (202)
Q Consensus 174 G~Y~C~a~N~~G~---~~~~~~L~V 195 (202)
|.|.|.|.|..+. ....+.|.|
T Consensus 104 G~Y~C~~~~~~~~~~~~~~~~~l~V 128 (234)
T 2j6e_L 104 ADYYCATWDDSLSAVIFGGGTKLTV 128 (234)
T ss_dssp SEEEEEEEETTTTEEEECCCBCCCB
T ss_pred EEEEEEEEcCCcceeEecCCEEEEE
Confidence 9999999999882 222345555
No 404
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.82 E-value=3.7e-09 Score=86.98 Aligned_cols=83 Identities=11% Similarity=0.094 Sum_probs=63.6
Q ss_pred CCeeEEecCCeEEEEEEEEee-----cCCceEEEeCCEEcccCCcEEEEEeeCC--eEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 111 HDTQYGIKNENSSLFWFVYGY-----PKPKVSFYFNDELIEMGGRYDSSYTRNG--QATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 111 ~~~~~v~~G~~v~L~C~v~G~-----P~P~i~W~k~g~~l~~~~r~~i~~~~~~--~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.+. .+..|+++.|.|.+.|. |.|.|.|.++|..|..+ ++.. ...+ .+.|.|.++...|+|.|+|.+.+.
T Consensus 8 ~~~-~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~--~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~ 83 (313)
T 2d9q_B 8 SAP-IVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQR--LSDGTQESIITLPHLNHTQAFLSCSLNWGN 83 (313)
T ss_dssp SCS-EECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECC--CSSSCCCEEEEESCCCSSEEEEEEEEESSS
T ss_pred CCc-EEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEE--EecCeEEEEEEEeccCCCccceEEeeecCC
Confidence 455 78899999999999997 67899999999887543 2221 0122 168999999999999999999877
Q ss_pred CceEEEEEEEEeec
Q psy5280 184 HGTARQRVSSGNPA 197 (202)
Q Consensus 184 ~G~~~~~~~L~V~~ 197 (202)
.+...+.+.|.|..
T Consensus 84 ~~~~~~~~~l~v~~ 97 (313)
T 2d9q_B 84 SLQILDQVELRAGY 97 (313)
T ss_dssp SEEEEEEEEEEECC
T ss_pred CceeEEEEEEccCC
Confidence 66666667777653
No 405
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.82 E-value=7.2e-09 Score=75.06 Aligned_cols=89 Identities=9% Similarity=0.015 Sum_probs=63.3
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec-CCceEEEeC--C---EEc-c---------cCCcEEEEEe-eCCeEEEEEccCCC
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP-KPKVSFYFN--D---ELI-E---------MGGRYDSSYT-RNGQATLFINKMLD 170 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P-~P~i~W~k~--g---~~l-~---------~~~r~~i~~~-~~~~~~L~I~~~~~ 170 (202)
..+... .+.+|++|.|.|.+.+.. ...+.|++. + ..| . ..+|+.+... ......|.|.++..
T Consensus 6 Q~P~~~-~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~ 84 (129)
T 3rrq_A 6 FSPALL-VVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARR 84 (129)
T ss_dssp EECSEE-EEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCG
T ss_pred ECCCEE-EEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCCh
Confidence 344455 889999999999998765 457999973 2 111 1 1246666321 22357899999999
Q ss_pred CCCEEEEEEEEeCCceE----EEEEEEEeec
Q psy5280 171 RDVGMYEALASNEHGTA----RQRVSSGNPA 197 (202)
Q Consensus 171 ~D~G~Y~C~a~N~~G~~----~~~~~L~V~~ 197 (202)
+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 85 ~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~ 115 (129)
T 3rrq_A 85 NDSGTYLCGAISLAPKLQIKESLRAELRVTE 115 (129)
T ss_dssp GGCEEEEEEEEECGGGCEEEECCCEEEEEEC
T ss_pred hHCEEEEEEEEecCCCceeeEeceEEEEEec
Confidence 99999999999988765 3457788764
No 406
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.82 E-value=1.2e-08 Score=77.86 Aligned_cols=64 Identities=16% Similarity=0.091 Sum_probs=49.8
Q ss_pred ecCCeEEEEEEE-EeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEE
Q psy5280 117 IKNENSSLFWFV-YGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSS 193 (202)
Q Consensus 117 ~~G~~v~L~C~v-~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L 193 (202)
..+.++.|.|.+ .| |.|.++|++++..+.. . ...+|.+.. ..|+|.|+|.|.|.+|...+.+.+
T Consensus 113 ~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~-----~-----~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 113 WECSNATLTCEVLEG-TDVELKLYQGKEHLRS-----L-----RQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp EEGGGTEEEEECSSC-TTCEEEEEETTEEEEE-----E-----SSSEEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred ecCCCEEEEEEeCCC-CCCEEEEEECCeECcC-----C-----CCCEEEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 356779999999 66 9999999999988751 1 234555533 789999999999999988776654
No 407
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.82 E-value=3.2e-08 Score=78.04 Aligned_cols=75 Identities=12% Similarity=0.197 Sum_probs=54.1
Q ss_pred EecC-CeEEEEEEEEee-cCC-ceEEEe-CCEEccc---------CCcEEEEEeeCCeEEEEEccCCC--CCCEEEEEEE
Q psy5280 116 GIKN-ENSSLFWFVYGY-PKP-KVSFYF-NDELIEM---------GGRYDSSYTRNGQATLFINKMLD--RDVGMYEALA 180 (202)
Q Consensus 116 v~~G-~~v~L~C~v~G~-P~P-~i~W~k-~g~~l~~---------~~r~~i~~~~~~~~~L~I~~~~~--~D~G~Y~C~a 180 (202)
+..| +.+.|.|.+.|. |.| .++|++ +|..+.. +..+.+ .+.|.|..... .|.|.|+|.|
T Consensus 137 ~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~~~d~g~ytC~v 210 (232)
T 1dn0_B 137 SPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAA------TSQVLLPSKDVMAGTDEHVVCKV 210 (232)
T ss_dssp ----CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEE------EEEEEECTTCC---CCCEEEEEE
T ss_pred cCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEE------EEEEEEcHHHhcccCCCeEEEEE
Confidence 3468 999999999987 887 899999 8887653 111222 35688888876 7899999999
Q ss_pred EeCCceEEEEEEEEee
Q psy5280 181 SNEHGTARQRVSSGNP 196 (202)
Q Consensus 181 ~N~~G~~~~~~~L~V~ 196 (202)
.|..|.......+.|.
T Consensus 211 ~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 211 QHPNGNKEKNVPLPVI 226 (232)
T ss_dssp ECTTCCEEEEEECCC-
T ss_pred EeCCCCcceeEecCCC
Confidence 9999987776666544
No 408
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.82 E-value=1.1e-08 Score=71.79 Aligned_cols=74 Identities=15% Similarity=0.128 Sum_probs=55.8
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec----CCceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEEEEccCC
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP----KPKVSFYFND--E---LIE---------MGGRYDSSYTRNGQATLFINKML 169 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P----~P~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L~I~~~~ 169 (202)
..+... .+.+|+++.|.|.+.+.+ .+.+.|++.. . .+. ...|+.+.. ......|.|.++.
T Consensus 6 q~p~~~-~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~ 83 (111)
T 1j05_L 6 QSPASL-AVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG-SRTDFTLIIDPVE 83 (111)
T ss_dssp EECSEE-ECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCC
T ss_pred EeCCEE-EEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEc-cCCEEEEEECCCC
Confidence 334444 888999999999999877 5789999852 1 121 135676632 3456789999999
Q ss_pred CCCCEEEEEEEEeC
Q psy5280 170 DRDVGMYEALASNE 183 (202)
Q Consensus 170 ~~D~G~Y~C~a~N~ 183 (202)
.+|+|.|.|.+.|.
T Consensus 84 ~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 84 ADDVATYYCQQTNE 97 (111)
T ss_dssp GGGCEEEEEEECSS
T ss_pred cccCEEEEEEEecC
Confidence 99999999999885
No 409
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.81 E-value=8.9e-09 Score=88.14 Aligned_cols=71 Identities=13% Similarity=0.155 Sum_probs=53.9
Q ss_pred EecCCeEEEEEEEEee-cCC-ceEEEeCCEEccc--------CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 116 GIKNENSSLFWFVYGY-PKP-KVSFYFNDELIEM--------GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~--------~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
+.+|+.+.|.|.+.|. |.| .|.|+|++..+.. +..+.+ ...|.|..+...| |.|+|.|.|..|
T Consensus 131 ~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~d-g~Y~C~a~n~~~ 203 (434)
T 1igy_B 131 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL------SSSVTVPSSPRPS-ETVTCNVAHPAS 203 (434)
T ss_dssp CCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEE------EEEEEEETTTTTS-SCCEEEEECTTT
T ss_pred cCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEE------EEEEEEcchhcCC-CcEEEEEEeCCC
Confidence 4689999999999997 777 8999999875321 122222 3568999999889 999999999999
Q ss_pred eEEEEEEE
Q psy5280 186 TARQRVSS 193 (202)
Q Consensus 186 ~~~~~~~L 193 (202)
.......+
T Consensus 204 ~~~~~~~~ 211 (434)
T 1igy_B 204 STKVDKKI 211 (434)
T ss_dssp TCCEEEEC
T ss_pred Cccceeec
Confidence 85444433
No 410
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.81 E-value=2e-08 Score=77.93 Aligned_cols=88 Identities=15% Similarity=0.188 Sum_probs=62.4
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--E---Ecc----------------cCCcEEEEEee-CCeEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--E---LIE----------------MGGRYDSSYTR-NGQATL 163 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~---~l~----------------~~~r~~i~~~~-~~~~~L 163 (202)
.++... .+.+|+++.|.|.+.|.| .+.+.|+|++ . .+. ...|+.+.... .+...|
T Consensus 5 ~~p~~~-~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 83 (220)
T 1pz5_B 5 EESGGG-LVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYL 83 (220)
T ss_dssp EEECCE-EECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred eccCCE-EEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEE
Confidence 345555 889999999999999877 6899999853 1 110 03566663321 234689
Q ss_pred EEccCCCCCCEEEEEEEEeCCceE-E--EEEEEEee
Q psy5280 164 FINKMLDRDVGMYEALASNEHGTA-R--QRVSSGNP 196 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~~G~~-~--~~~~L~V~ 196 (202)
.|.++..+|+|.|.|.+.|..|.. . ..+.|.|.
T Consensus 84 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 119 (220)
T 1pz5_B 84 QMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVS 119 (220)
T ss_dssp EECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEEC
T ss_pred EEccCCHHHCEEEEEEEecCCcccceECCCEEEEEc
Confidence 999999999999999999986532 1 23556554
No 411
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.81 E-value=1.8e-08 Score=79.11 Aligned_cols=88 Identities=10% Similarity=0.007 Sum_probs=62.1
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EE---c---c-----------cCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--EL---I---E-----------MGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~---l---~-----------~~~r~~i~~~~-~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|.| .+.|.|+|+. .. + . ...|+.+.... .....|.|
T Consensus 5 ~qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (227)
T 1mju_H 5 QQPGAE-LVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQL 83 (227)
T ss_dssp ECCSEE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred cCCCCe-EEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEE
Confidence 345555 789999999999999987 6899999853 21 1 0 13566663321 34678999
Q ss_pred ccCCCCCCEEEEEEEEeCCceE-EEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNEHGTA-RQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~-~~~~~L~V~ 196 (202)
.++..+|+|.|.|.+.|..+.. ...+.|.|.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~ 115 (227)
T 1mju_H 84 SSLTSDDSAVYYCANKLGWFPYWGQGTLVTVS 115 (227)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CCCCcccCEEEEEEECCCCceEEcCcEEEEEc
Confidence 9999999999999999964321 123456665
No 412
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.81 E-value=1.7e-09 Score=84.66 Aligned_cols=82 Identities=17% Similarity=0.133 Sum_probs=48.1
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--EEc------------ccCCcEEEEEeeCCeEEEEEccC
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--ELI------------EMGGRYDSSYTRNGQATLFINKM 168 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~~l------------~~~~r~~i~~~~~~~~~L~I~~~ 168 (202)
.+.+...+.+. .+.+|+++.|.|.+.|.|.+.+.|+|+. ..+ ....++.+.. ......|.|.++
T Consensus 23 ~~~v~~~p~~~-~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 100 (233)
T 3bqu_C 23 ETTVTQSPASL-SMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG-YGTDFVFTIENM 100 (233)
T ss_dssp CCCEEEECSBC--------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE-EEEEEEEC----
T ss_pred ceeEEEcCCeE-EEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec-cCCEEEEEECCC
Confidence 34455556666 8899999999999999999999999853 111 0123444311 122458999999
Q ss_pred CCCCCEEEEEEEEeCCce
Q psy5280 169 LDRDVGMYEALASNEHGT 186 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G~ 186 (202)
..+|+|.|.|.+.|..+.
T Consensus 101 ~~~D~G~Y~C~~~~~~~~ 118 (233)
T 3bqu_C 101 LSEDVADYYCLQSDNLPY 118 (233)
T ss_dssp -CCCCSEEEEEECSSSSC
T ss_pred CHHHCEEEEEEEecCCce
Confidence 999999999999998763
No 413
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.81 E-value=3.3e-08 Score=76.50 Aligned_cols=87 Identities=13% Similarity=0.042 Sum_probs=61.6
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC-----EEc-------------ccCCcEEEEEeeCCeEEEEEcc
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND-----ELI-------------EMGGRYDSSYTRNGQATLFINK 167 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g-----~~l-------------~~~~r~~i~~~~~~~~~L~I~~ 167 (202)
..+... .+.+|+++.|.|.+.|.+ .+.+.|+|.. ..+ ....|+.+.. ......|.|.+
T Consensus 4 ~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~ 81 (215)
T 3nl4_H 4 EESGGR-LVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK-TSTTVDLKITS 81 (215)
T ss_dssp EEECCC-EECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE-CSSEEEEEESS
T ss_pred EcCCCE-EEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe-eCCEEEEEECC
Confidence 345555 889999999999998844 6789999742 111 1235666643 34567899999
Q ss_pred CCCCCCEEEEEEEEeCCce----EEEEEEEEee
Q psy5280 168 MLDRDVGMYEALASNEHGT----ARQRVSSGNP 196 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~G~----~~~~~~L~V~ 196 (202)
+..+|+|.|.|.+.|..+. ....+.|.|.
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 114 (215)
T 3nl4_H 82 PTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVS 114 (215)
T ss_dssp CCGGGCEEEEEEEECSSSSCEEEECCCEEEEEC
T ss_pred CCcccCEEEEEEEecCCCccceEEcCCEEEEEe
Confidence 9999999999999998653 2233455554
No 414
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.81 E-value=2e-08 Score=79.89 Aligned_cols=91 Identities=11% Similarity=0.013 Sum_probs=62.8
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCC-ceEEEeC--CEEcc------------cCCcEEEEEeeCCeEEEEEccC
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKP-KVSFYFN--DELIE------------MGGRYDSSYTRNGQATLFINKM 168 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P-~i~W~k~--g~~l~------------~~~r~~i~~~~~~~~~L~I~~~ 168 (202)
+.+...+... .+.+|+++.|.|.+.|.|.| .+.|+|. +..+. ...++.+. .......|.|.++
T Consensus 142 ~~~~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v 219 (257)
T 3gkz_A 142 IVLTQSPAIM-SASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGS-GSGTSYSLTISSM 219 (257)
T ss_dssp CCEECSCSEE-EECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSC
T ss_pred eEEEcCCceE-EEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEe-cCCCEEEEEECCC
Confidence 3444444445 88899999999999999888 9999983 22211 12455552 2344678999999
Q ss_pred CCCCCEEEEEEEEeCCceEE-EEEEEEee
Q psy5280 169 LDRDVGMYEALASNEHGTAR-QRVSSGNP 196 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~~G~~~-~~~~L~V~ 196 (202)
..+|+|.|.|.|.|...... ....|.|.
T Consensus 220 ~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~ 248 (257)
T 3gkz_A 220 EAEDAASYFCHQWSSFPFTFGSGTKLEIK 248 (257)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred ChHHCEEEEEEEccCCceEEcCCEEEEEE
Confidence 99999999999998544322 22355554
No 415
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.80 E-value=3.5e-08 Score=76.99 Aligned_cols=88 Identities=14% Similarity=0.049 Sum_probs=62.6
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--E---Ecc--------------cCCcEEEEEe-eCCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--E---LIE--------------MGGRYDSSYT-RNGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~---~l~--------------~~~r~~i~~~-~~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|.| .+.+.|+|.. . .+. ...|+.+... ......|.|
T Consensus 5 ~q~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (220)
T 2fbj_H 5 LESGGG-LVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQM 83 (220)
T ss_dssp EEECCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEE
T ss_pred ecCCCe-EecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEE
Confidence 344455 889999999999999876 6789999852 1 111 1356766332 123568999
Q ss_pred ccCCCCCCEEEEEEEEeCCce---EEEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNEHGT---ARQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~---~~~~~~L~V~ 196 (202)
.++..+|+|.|.|.+.|..+. ....+.|.|.
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~ 117 (220)
T 2fbj_H 84 SKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVS 117 (220)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEEECCCEEEEEC
T ss_pred CCCChhhCEEEEEEEeccccccceecCCEEEEec
Confidence 999999999999999998653 2223466665
No 416
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.80 E-value=2e-08 Score=81.93 Aligned_cols=82 Identities=15% Similarity=0.057 Sum_probs=59.0
Q ss_pred EEecCCeEEEEEEEEeecCC------ceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEEEEccCCCCCCE
Q psy5280 115 YGIKNENSSLFWFVYGYPKP------KVSFYFND--E---LIE---------MGGRYDSSYTRNGQATLFINKMLDRDVG 174 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P------~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~D~G 174 (202)
.+.+|+++.|.|.+.|.|.+ .+.|+|+. . .+. ...++.+.. ......|.|.++..+|+|
T Consensus 170 ~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~DsG 248 (291)
T 2gki_A 170 AVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSG-SGTDFTLTISSVQAEDLA 248 (291)
T ss_dssp EEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCE
T ss_pred EEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEe-cCCEEEEEECCCCHHHCE
Confidence 78899999999999999876 89999962 2 111 135666532 344678999999999999
Q ss_pred EEEEEEEeCCceEE-EEEEEEeec
Q psy5280 175 MYEALASNEHGTAR-QRVSSGNPA 197 (202)
Q Consensus 175 ~Y~C~a~N~~G~~~-~~~~L~V~~ 197 (202)
.|.|.|.|...... ....|.|..
T Consensus 249 ~Y~C~a~~~~~~~fg~gt~l~v~~ 272 (291)
T 2gki_A 249 VYYCKQSYYHMYTFGSGTKLEIKH 272 (291)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEC
T ss_pred EEEEEEccCCceEEcCCEEEEEEe
Confidence 99999999654222 123455543
No 417
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.80 E-value=2.2e-08 Score=79.70 Aligned_cols=89 Identities=11% Similarity=0.099 Sum_probs=63.0
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--E---Ec--------------ccCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--E---LI--------------EMGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~---~l--------------~~~~r~~i~~~~-~~~~~L~I 165 (202)
..+... .+.+|+++.|.|.+.|.| .+.+.|++.. . .+ ....|+.+.... .....|.|
T Consensus 7 ~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 85 (256)
T 3umt_A 7 QQSGLE-LVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLEL 85 (256)
T ss_dssp EECCCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred EccCce-EEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEE
Confidence 344455 788999999999999976 6899999732 1 11 013466653322 23567999
Q ss_pred ccCCCCCCEEEEEEEEeC----CceEEEEEEEEeec
Q psy5280 166 NKMLDRDVGMYEALASNE----HGTARQRVSSGNPA 197 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~----~G~~~~~~~L~V~~ 197 (202)
.++..+|+|.|.|.+.|. .+.....+.|.|..
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~ 121 (256)
T 3umt_A 86 RSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSS 121 (256)
T ss_dssp CSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC
T ss_pred CCCCcccCEEEEEEEccCCCccccEECCCEEEEEcC
Confidence 999999999999999998 44444456666663
No 418
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.29 E-value=5.4e-10 Score=78.57 Aligned_cols=73 Identities=18% Similarity=0.114 Sum_probs=54.7
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--EEc------------ccCCcEEEEEe-eCCeEEEEEccCCCCCCE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--ELI------------EMGGRYDSSYT-RNGQATLFINKMLDRDVG 174 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~~l------------~~~~r~~i~~~-~~~~~~L~I~~~~~~D~G 174 (202)
+.+. .+.+|+++.|.|.+.+.+.+.+.|++.. ..+ ....|+.+... ......|.|.++..+|+|
T Consensus 6 p~~v-~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG 84 (110)
T 1u3h_A 6 PQSL-TVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSA 84 (110)
Confidence 4444 7889999999999998888899999863 211 12345555321 223468999999999999
Q ss_pred EEEEEEEeC
Q psy5280 175 MYEALASNE 183 (202)
Q Consensus 175 ~Y~C~a~N~ 183 (202)
.|.|.+.|.
T Consensus 85 ~Y~C~~~~~ 93 (110)
T 1u3h_A 85 TYFCAASAN 93 (110)
Confidence 999999985
No 419
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.80 E-value=1.2e-08 Score=71.41 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=54.7
Q ss_pred cCCeeEEecCCeEEEEEE-EEeec-CCceEEEeCCEEcc------------cCCcEEEEE-eeCCeEEEEEccCCCCCCE
Q psy5280 110 EHDTQYGIKNENSSLFWF-VYGYP-KPKVSFYFNDELIE------------MGGRYDSSY-TRNGQATLFINKMLDRDVG 174 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~-v~G~P-~P~i~W~k~g~~l~------------~~~r~~i~~-~~~~~~~L~I~~~~~~D~G 174 (202)
+... .+.+|+++.|.|. +.+.+ .+.+.|+|....+. ...|+.+.. .......|.|.++..+|+|
T Consensus 7 p~~~-~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG 85 (109)
T 1pew_A 7 PHSV-SESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEA 85 (109)
T ss_dssp CSEE-EECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred CCCE-EEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCE
Confidence 4444 8899999999999 87776 47899999762110 135676643 2234568999999999999
Q ss_pred EEEEEEEeCC
Q psy5280 175 MYEALASNEH 184 (202)
Q Consensus 175 ~Y~C~a~N~~ 184 (202)
.|.|.+.|..
T Consensus 86 ~Y~C~~~~~~ 95 (109)
T 1pew_A 86 DYYCQSYDAR 95 (109)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEEeCC
Confidence 9999999853
No 420
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.79 E-value=2e-08 Score=79.35 Aligned_cols=77 Identities=17% Similarity=0.192 Sum_probs=56.3
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EEc------c-----------cCCcEEEEEe-eCCeEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--ELI------E-----------MGGRYDSSYT-RNGQATL 163 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~l------~-----------~~~r~~i~~~-~~~~~~L 163 (202)
++..+... .+.+|+++.|.|.+.|.| .+.+.|+|++ ..+ . ...++.+... ......|
T Consensus 130 ~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 208 (247)
T 1svz_A 130 QLQQSGPE-LKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFL 208 (247)
T ss_dssp EEEECCCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEE
T ss_pred EEeCCCce-eecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEE
Confidence 34444444 688999999999999985 5799999963 211 0 1356665332 2335789
Q ss_pred EEccCCCCCCEEEEEEEEeC
Q psy5280 164 FINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.|.++..+|+|.|.|.|.|.
T Consensus 209 ~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 209 QINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EECSCCGGGCEEEEEEEEEG
T ss_pred EECCCChhHCEEEEEEEecc
Confidence 99999999999999999996
No 421
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.79 E-value=3.2e-08 Score=73.50 Aligned_cols=91 Identities=13% Similarity=0.073 Sum_probs=64.1
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCC
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKML 169 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~ 169 (202)
+.+...+... .+.+|++|.|.|.+.+.+.+.+.|++.. ..|. ...|+.+.. ......|.|.++.
T Consensus 17 ~~v~q~p~~v-~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~-~~~~~sL~I~~v~ 94 (146)
T 2yc1_B 17 IVLTQSPATL-SVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSG-SGTDFTLTISSLE 94 (146)
T ss_dssp CCEEEECSEE-EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCC
T ss_pred ceEEEeCCEE-EEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEec-CCCEEEEEECCCC
Confidence 3444445555 8999999999999998888899999853 2221 135676643 3456789999999
Q ss_pred CCCCEEEEEEEEeCCceE-EEEEEEEee
Q psy5280 170 DRDVGMYEALASNEHGTA-RQRVSSGNP 196 (202)
Q Consensus 170 ~~D~G~Y~C~a~N~~G~~-~~~~~L~V~ 196 (202)
.+|+|.|.|.+.|..... .....|.|.
T Consensus 95 ~~DsG~Y~C~~~~~~~~~fg~GT~L~V~ 122 (146)
T 2yc1_B 95 PEDFAIYYCQQYRYSPRTFGQGTKVEIK 122 (146)
T ss_dssp GGGCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred HHHCEEEEEEEecCCCCeECCCEEEEEe
Confidence 999999999998763211 122355554
No 422
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.79 E-value=1.2e-08 Score=79.68 Aligned_cols=67 Identities=13% Similarity=0.218 Sum_probs=52.4
Q ss_pred EecCCeEEEEEEEEee-cC--CceEEEeCCEEccc---------CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 116 GIKNENSSLFWFVYGY-PK--PKVSFYFNDELIEM---------GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~-P~--P~i~W~k~g~~l~~---------~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
+.+|+.+.|.|.+.|. |. +.|+|++++..+.. ...+.+ ...|.|......|.|.|+|.|.|.
T Consensus 134 ~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~------~s~L~i~~~~~~d~g~ytC~v~n~ 207 (220)
T 2fbj_H 134 ALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTM------SNQLTLPAVECPEGESVKCSVQHD 207 (220)
T ss_dssp SSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEE------EEEEEECGGGSCTTCEEEEEEEET
T ss_pred ccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEE------EEEEEECHHHcCCCCeEEEEEEcC
Confidence 3579999999999998 76 68999999876521 111222 235889888889999999999999
Q ss_pred CceEE
Q psy5280 184 HGTAR 188 (202)
Q Consensus 184 ~G~~~ 188 (202)
.|...
T Consensus 208 ~~~~~ 212 (220)
T 2fbj_H 208 SNPVQ 212 (220)
T ss_dssp TSCCE
T ss_pred CCceE
Confidence 99876
No 423
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.79 E-value=1.6e-08 Score=70.62 Aligned_cols=82 Identities=15% Similarity=0.033 Sum_probs=58.0
Q ss_pred EEecCCeEEEEEEEEeecC-CceEEEeCCE--E---cc--------cCCcEEEEEe-eCCeEEEEEccCCCCCCEEEEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPK-PKVSFYFNDE--L---IE--------MGGRYDSSYT-RNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~-P~i~W~k~g~--~---l~--------~~~r~~i~~~-~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.+.+|+++.|.|.+.+... +.+.|++... . |. ...|+.+... ......|.|.++..+|+|.|.|.
T Consensus 7 ~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 86 (110)
T 2q87_A 7 AGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCG 86 (110)
T ss_dssp EECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEE
T ss_pred EEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEE
Confidence 7889999999999887543 6899998641 1 10 1346665322 23356899999999999999999
Q ss_pred EEeCC-c---eEEEEEEEEee
Q psy5280 180 ASNEH-G---TARQRVSSGNP 196 (202)
Q Consensus 180 a~N~~-G---~~~~~~~L~V~ 196 (202)
+.+.. | .....+.|.|.
T Consensus 87 ~~~~~~g~~~~~~~~v~v~V~ 107 (110)
T 2q87_A 87 VDTPWLQDFHDPVVEVEVSVF 107 (110)
T ss_dssp EECTTSCCBCCCSEEEEEEEC
T ss_pred EecCccCccCCccEEEEEEEe
Confidence 99986 5 23344455553
No 424
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.79 E-value=1.2e-08 Score=77.80 Aligned_cols=80 Identities=15% Similarity=0.120 Sum_probs=60.6
Q ss_pred EEecCCeEEEEEEEEe-ecCCceEEEeC-CEEcc------------cC--CcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 115 YGIKNENSSLFWFVYG-YPKPKVSFYFN-DELIE------------MG--GRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G-~P~P~i~W~k~-g~~l~------------~~--~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
.+.+|++|.|.|.+.+ .+.+.|.|+|+ +..+. .. .|+.+ ...++.|.|.++..+|+|.|.|
T Consensus 10 ~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l---~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 10 NAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL---DKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp EEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE---CTTTCCEEECSCCGGGCEEEEE
T ss_pred EEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE---eCCCccEEEcCCCHHHCeEEEE
Confidence 7899999999999855 34689999994 32221 11 45554 2346789999999999999999
Q ss_pred EEEeCCceEEEEEEEEeecC
Q psy5280 179 LASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 179 ~a~N~~G~~~~~~~L~V~~~ 198 (202)
.+.+.. .....+.|.|.++
T Consensus 87 ~v~~~~-~~~~~~~L~V~~~ 105 (180)
T 2dru_A 87 RMLHET-EDQWKITMEVYEM 105 (180)
T ss_dssp EEESSS-EEEEEEEEEEECC
T ss_pred EEEcCC-eEEEEEEEEEECC
Confidence 998877 6677788888754
No 425
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.79 E-value=4.3e-08 Score=76.65 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=57.1
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC-----EEcc--------------cCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND-----ELIE--------------MGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g-----~~l~--------------~~~r~~i~~~~-~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|.+ .+.+.|+|.. ..+. ...|+.+.... .....|.|
T Consensus 5 ~qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (223)
T 1dee_B 5 VESGGG-VVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQM 83 (223)
T ss_dssp EEECCC-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred EcCCCE-EEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEE
Confidence 344455 889999999999999876 4789999853 1110 13567663321 23578999
Q ss_pred ccCCCCCCEEEEEEEEeCCc
Q psy5280 166 NKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G 185 (202)
.++..+|+|.|.|.+.|..|
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~ 103 (223)
T 1dee_B 84 NSLRAEDTAVYYCAKVKFYD 103 (223)
T ss_dssp CSCCGGGCEEEEEEEESSSS
T ss_pred CCCCHHHCEEEEEEEecccc
Confidence 99999999999999999764
No 426
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.78 E-value=5.6e-08 Score=79.42 Aligned_cols=70 Identities=6% Similarity=-0.064 Sum_probs=56.1
Q ss_pred ccCCeeEEecCCeEEEEEEEEe-------ecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEE
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYG-------YPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALAS 181 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G-------~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 181 (202)
.+.+. .+..|+++.|.|.+.| .|.|.|.|.|+|..|..+ ++.+. ....+.|.|.++...| |.|+|.|.
T Consensus 10 ~P~~~-~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~--~~~~~~L~i~~~~~~~-g~Y~C~a~ 84 (303)
T 1i1r_A 10 SPESP-VVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII--NRTASSVTFTDIASLN-IQLTCNIL 84 (303)
T ss_dssp ESSSC-EEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE--ETTEEEEEECSCCCSE-EEEEEEEE
T ss_pred ccCCc-eEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee--CCcEEEEEEcCcCCCc-eEEEEecc
Confidence 35666 8899999999999996 488999999999998654 44431 2335689999999885 99999998
Q ss_pred eC
Q psy5280 182 NE 183 (202)
Q Consensus 182 N~ 183 (202)
|.
T Consensus 85 ~~ 86 (303)
T 1i1r_A 85 TF 86 (303)
T ss_dssp ET
T ss_pred cC
Confidence 84
No 427
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.78 E-value=5.8e-09 Score=83.58 Aligned_cols=64 Identities=13% Similarity=0.229 Sum_probs=49.1
Q ss_pred ecCCeEEEEEEEEeecCC--ceEEEeCCEEcccCC----------------cEEEEEeeCCeEEEEEccCCCCC-CEEEE
Q psy5280 117 IKNENSSLFWFVYGYPKP--KVSFYFNDELIEMGG----------------RYDSSYTRNGQATLFINKMLDRD-VGMYE 177 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~~~~----------------r~~i~~~~~~~~~L~I~~~~~~D-~G~Y~ 177 (202)
.+|+.+.|.|.+.|.|++ .++|+|+|..+.... .+.+ ...|.|......| .|.|+
T Consensus 159 ~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~------~s~l~i~~~~~~d~~g~Yt 232 (268)
T 3pl6_D 159 SHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSL------SSRLRVSATFWQNPRNHFR 232 (268)
T ss_dssp HHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEE------EEEEEEEHHHHSCTTCEEE
T ss_pred cCCCceEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEE------EEEEEEcHHHhccCCCEEE
Confidence 458999999999997765 899999998885432 1222 2457777777777 99999
Q ss_pred EEEEeCCce
Q psy5280 178 ALASNEHGT 186 (202)
Q Consensus 178 C~a~N~~G~ 186 (202)
|.|.|....
T Consensus 233 C~v~~~~l~ 241 (268)
T 3pl6_D 233 CQVQFYGLS 241 (268)
T ss_dssp EEEEECCBC
T ss_pred EEEEcCCCC
Confidence 999998654
No 428
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.78 E-value=1.1e-08 Score=80.70 Aligned_cols=70 Identities=10% Similarity=0.167 Sum_probs=49.0
Q ss_pred ecCCeEEEEEEEEeec-CC-ceEEEeCCEEcccCCcEEEEE-e-----eCC----eEEEEEccCCCCC-CEEEEEEEEeC
Q psy5280 117 IKNENSSLFWFVYGYP-KP-KVSFYFNDELIEMGGRYDSSY-T-----RNG----QATLFINKMLDRD-VGMYEALASNE 183 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~P-~P-~i~W~k~g~~l~~~~r~~i~~-~-----~~~----~~~L~I~~~~~~D-~G~Y~C~a~N~ 183 (202)
.+|+.+.|.|.+.|.+ .| .++|+|+|..+....+..... . ..+ ...|.|......| .|.|+|.|.|.
T Consensus 137 ~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~ 216 (245)
T 4ei6_B 137 SHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 216 (245)
T ss_dssp HHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEEC
T ss_pred cCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEEC
Confidence 4589999999999954 45 799999999886532211000 0 011 2458888887778 89999999997
Q ss_pred Cce
Q psy5280 184 HGT 186 (202)
Q Consensus 184 ~G~ 186 (202)
...
T Consensus 217 ~l~ 219 (245)
T 4ei6_B 217 GLS 219 (245)
T ss_dssp CBC
T ss_pred CCC
Confidence 654
No 429
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.78 E-value=1.2e-08 Score=80.19 Aligned_cols=82 Identities=7% Similarity=0.005 Sum_probs=53.7
Q ss_pred EEecCCeEEEEEEEEee-cCC-ceEEEeCCEEccc--CCcEEE-EEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 115 YGIKNENSSLFWFVYGY-PKP-KVSFYFNDELIEM--GGRYDS-SYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~--~~r~~i-~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
.+.+|+.+.|.|.+.|. |.| .+.|++++..+.. ...... ... ...+.|.|..+...| |.|+|.|.|..+....
T Consensus 132 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~-~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 209 (227)
T 1mju_H 132 GDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLY-TLSSSVTVTSSTWPS-QSITCNVAHPASSTKV 209 (227)
T ss_dssp ------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEE-EEEEEEEECTTTTTT-SCCEEEEEEGGGTEEE
T ss_pred cccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCceecCCeE-EEEEEEEEchhhcCC-CeEEEEEEECCCCcce
Confidence 45679999999999996 877 8999999876531 111100 000 013578999888878 9999999999887766
Q ss_pred EEEEEeecC
Q psy5280 190 RVSSGNPAQ 198 (202)
Q Consensus 190 ~~~L~V~~~ 198 (202)
...+.+..+
T Consensus 210 ~~~~~~~~~ 218 (227)
T 1mju_H 210 DKKIEPRGP 218 (227)
T ss_dssp EEECCCCCC
T ss_pred EEEeCCCCC
Confidence 666655544
No 430
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.78 E-value=3e-09 Score=94.29 Aligned_cols=80 Identities=15% Similarity=0.090 Sum_probs=65.0
Q ss_pred eEEecCCeEEEEEEE-EeecCCceEEEeCCEEcc------------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 114 QYGIKNENSSLFWFV-YGYPKPKVSFYFNDELIE------------MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v-~G~P~P~i~W~k~g~~l~------------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
..+.+|+++.|.|.+ .|.|.|.|+|+|++..+. -..+..+ ...++|.|.++..+|+|.|+|.+
T Consensus 376 ~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~----~~~~~L~i~~v~~~D~G~Y~C~~ 451 (581)
T 3o3u_N 376 ITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARV----LPNGSLFLPAVGIQDEGIFRCQA 451 (581)
T ss_dssp EEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEE----CTTSCEEESSCCGGGCEEEEEEE
T ss_pred cceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEE----cCCceEEEeccccccCeEEEEEE
Confidence 378899999999999 889999999999865221 1234444 34458999999999999999999
Q ss_pred EeCCceE-EEEEEEEeec
Q psy5280 181 SNEHGTA-RQRVSSGNPA 197 (202)
Q Consensus 181 ~N~~G~~-~~~~~L~V~~ 197 (202)
.|..|.. ...+.|.|..
T Consensus 452 ~n~~~~~~~~~~~l~V~~ 469 (581)
T 3o3u_N 452 MNRNGKETKSNYRVRVYQ 469 (581)
T ss_dssp ECTTSCEEEEEEEEEEEB
T ss_pred EcCCCceeEEEEEEEEEc
Confidence 9999988 7778888865
No 431
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.78 E-value=2.8e-08 Score=71.49 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=52.7
Q ss_pred cCCeeEEecCCeEEEEEEEEee-cCCceEEEeCCE----EcccC-----CcEEEEEe----eCCeEEEEEccCCCCCCEE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGY-PKPKVSFYFNDE----LIEMG-----GRYDSSYT----RNGQATLFINKMLDRDVGM 175 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~-P~P~i~W~k~g~----~l~~~-----~r~~i~~~----~~~~~~L~I~~~~~~D~G~ 175 (202)
+... .+.+|++|.|.|.+.+. |.+.|.|+++.. .+... .++..... ......|.|.++..+|+|.
T Consensus 10 p~~~-~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~ 88 (127)
T 2jju_A 10 EKSV-SVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGT 88 (127)
T ss_dssp CSEE-EEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCEE
T ss_pred CCeE-EEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCEE
Confidence 3344 88999999999999876 678899999751 12111 23432110 1235679999999999999
Q ss_pred EEEEEEeCC
Q psy5280 176 YEALASNEH 184 (202)
Q Consensus 176 Y~C~a~N~~ 184 (202)
|.|.+.|..
T Consensus 89 Y~C~~~~~~ 97 (127)
T 2jju_A 89 YYCVKFRKG 97 (127)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEcCC
Confidence 999999863
No 432
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.78 E-value=1.8e-09 Score=85.32 Aligned_cols=82 Identities=7% Similarity=-0.095 Sum_probs=59.2
Q ss_pred CeEEeccCCeeEEecCCeEEEEEEEEee-cC-C-ceEEEeCCEEc-ccCCcEEEEEeeCC----eEEEEEccCCCCCCEE
Q psy5280 104 PRFLNQEHDTQYGIKNENSSLFWFVYGY-PK-P-KVSFYFNDELI-EMGGRYDSSYTRNG----QATLFINKMLDRDVGM 175 (202)
Q Consensus 104 P~fi~~~~~~~~v~~G~~v~L~C~v~G~-P~-P-~i~W~k~g~~l-~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~ 175 (202)
..++..+... .+.+|+++.|.|.+.|. |. | .|+|+++|..+ ........ ....+ ...|.|..+..+|.|.
T Consensus 14 ~v~~~~p~~~-~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~-~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 14 QLYAIPPSPG-ELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQ-EHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp EEEEECCCHH-HHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEE-ECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred EEEEeCcChh-hcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccce-ECCCCcEEEEEEEEecchhccCCCE
Confidence 3345666665 67799999999999996 64 6 99999999877 32221111 00111 2469999999999999
Q ss_pred EEEEEEeCCceE
Q psy5280 176 YEALASNEHGTA 187 (202)
Q Consensus 176 Y~C~a~N~~G~~ 187 (202)
|+|.|.|..+..
T Consensus 92 Y~C~~~~~~~~~ 103 (231)
T 2w59_A 92 FTCTVQHEELPL 103 (231)
T ss_dssp EEEEEECTTCSS
T ss_pred EEEEEEcCCCCC
Confidence 999999988754
No 433
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.78 E-value=6.2e-08 Score=67.40 Aligned_cols=87 Identities=13% Similarity=0.009 Sum_probs=62.2
Q ss_pred CCeeEEecCCeEEEEEEEEe-ecCCceEEEeCC----EEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 111 HDTQYGIKNENSSLFWFVYG-YPKPKVSFYFND----ELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 111 ~~~~~v~~G~~v~L~C~v~G-~P~P~i~W~k~g----~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
.+...+..|+.+.|+|.+.+ .+.|.++|.|-+ ..|......-..+.....-.|.+..+...|+|.|.|.|.+..|
T Consensus 18 ~S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg 97 (120)
T 2aw2_A 18 QSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSN 97 (120)
T ss_dssp TEEEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cccceEecCCeEEEEccEEeccCCCceEEEecCCceEEECccccccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCC
Confidence 34458899999999999999 699999999865 5554432100000011123789999999999999999999999
Q ss_pred eEEEE-EEEEeec
Q psy5280 186 TARQR-VSSGNPA 197 (202)
Q Consensus 186 ~~~~~-~~L~V~~ 197 (202)
...+. ..+.|.+
T Consensus 98 ~ieSHsvtI~Vt~ 110 (120)
T 2aw2_A 98 LIESHSTTLYVTD 110 (120)
T ss_dssp EEECCCEEEEEEC
T ss_pred cEEeeEEEEEEEe
Confidence 87654 4555543
No 434
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.78 E-value=2.7e-08 Score=70.07 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=56.3
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecC------CceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEcc
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPK------PKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINK 167 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~------P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~ 167 (202)
..+... .+.+|+++.|.|.+.+.+. +.+.|++.. ..|. ...|+.+.. ......|.|.+
T Consensus 6 q~p~~v-~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~ 83 (114)
T 1eeq_A 6 QSPDSL-AVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSG-SGTDFTLTISS 83 (114)
T ss_dssp EECSEE-EECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESS
T ss_pred ecCCeE-EEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEee-cCCEEEEEECC
Confidence 344455 8899999999999988773 789999853 1121 135676633 34567899999
Q ss_pred CCCCCCEEEEEEEEeCC
Q psy5280 168 MLDRDVGMYEALASNEH 184 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~ 184 (202)
+..+|+|.|.|.+.|..
T Consensus 84 v~~~DsG~Y~C~~~~~~ 100 (114)
T 1eeq_A 84 LQAEDVAVYYCQQYYSH 100 (114)
T ss_dssp CCGGGCEEEEEEECSSS
T ss_pred CCcccCEEEEEEEeeCC
Confidence 99999999999998863
No 435
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.77 E-value=2.7e-08 Score=80.25 Aligned_cols=90 Identities=9% Similarity=0.022 Sum_probs=63.0
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EE---c---c-----------cCCcEEEEEee-CCeEEEE
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--EL---I---E-----------MGGRYDSSYTR-NGQATLF 164 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~---l---~-----------~~~r~~i~~~~-~~~~~L~ 164 (202)
+.++... .+.+|+++.|.|.+.|.| .+.|.|+|+. .. + . ...|+.+.... .....|.
T Consensus 10 ~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 88 (261)
T 2xqy_G 10 LQQPGAE-LVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQ 88 (261)
T ss_dssp EECCSEE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred EECCCCE-EEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEE
Confidence 3445555 889999999999999987 6899999863 21 1 0 13466663321 2457899
Q ss_pred EccCCCCCCEEEEEEEEeCCce---EEEEEEEEeec
Q psy5280 165 INKMLDRDVGMYEALASNEHGT---ARQRVSSGNPA 197 (202)
Q Consensus 165 I~~~~~~D~G~Y~C~a~N~~G~---~~~~~~L~V~~ 197 (202)
|.++..+|+|.|.|.+.|..+. ....+.|.|.+
T Consensus 89 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 124 (261)
T 2xqy_G 89 LSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSS 124 (261)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred EcCCCcccCeEEEEEEecCCCcceEECCCEEEEEcc
Confidence 9999999999999999997531 11234566653
No 436
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.77 E-value=2.1e-08 Score=80.47 Aligned_cols=93 Identities=11% Similarity=0.061 Sum_probs=61.6
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CEE---c---------ccC---C-cEEEEEeeCCeEEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DEL---I---------EMG---G-RYDSSYTRNGQATLF 164 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~~---l---------~~~---~-r~~i~~~~~~~~~L~ 164 (202)
...++..+... .+.+|+++.|.|.+.+ +.+.|.|+|. +.. + ... . |+.+.........|.
T Consensus 27 ~~~v~~~p~~v-~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~ 104 (270)
T 3qib_D 27 GMKVIQTPRYL-VKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLE 104 (270)
T ss_dssp -CCCEEECSEE-EEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEE
T ss_pred ceeEEeCCCeE-EEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEE
Confidence 34455555555 8999999999999876 7789999982 111 1 000 1 555532223467899
Q ss_pred EccCCCCCCEEEEEEEEeCC----ceEEEEEEEEeec
Q psy5280 165 INKMLDRDVGMYEALASNEH----GTARQRVSSGNPA 197 (202)
Q Consensus 165 I~~~~~~D~G~Y~C~a~N~~----G~~~~~~~L~V~~ 197 (202)
|.++..+|+|.|.|.+.|.. +.....+.|.|.+
T Consensus 105 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 141 (270)
T 3qib_D 105 IQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLE 141 (270)
T ss_dssp ESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEES
T ss_pred ECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcc
Confidence 99999999999999999642 2222334555543
No 437
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.76 E-value=6.6e-09 Score=83.97 Aligned_cols=92 Identities=12% Similarity=0.059 Sum_probs=61.4
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEe
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASN 182 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N 182 (202)
+|.+...+. . .+.+|++++|.|.+.+ +.+.+.|+|++..+.................|.|.++..+|+|.|+|.+.|
T Consensus 7 kP~i~~~P~-~-~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 7 KPSLLAHPG-P-LVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCEECCBSC-S-EEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCEEEEcCC-C-EecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 566665554 4 7889999999999874 567899999986543211000000012356899999999999999999987
Q ss_pred CCc-----eEEEEEEEEeec
Q psy5280 183 EHG-----TARQRVSSGNPA 197 (202)
Q Consensus 183 ~~G-----~~~~~~~L~V~~ 197 (202)
..+ ..+..+.|.|..
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~ 103 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITG 103 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEEC
T ss_pred cCCCccccccCCCEEEeccc
Confidence 532 223445566543
No 438
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.75 E-value=6e-08 Score=71.76 Aligned_cols=87 Identities=14% Similarity=0.099 Sum_probs=62.1
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCCCCCC
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKMLDRDV 173 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~D~ 173 (202)
..+... .+.+|++|.|.|.+.+.+...+.|++.. +.|. ...|+.+. .......|.|.++..+|+
T Consensus 5 Q~p~~v-~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~-~~~~~~sL~I~~l~~~Ds 82 (143)
T 3u6r_L 5 QSPATL-SLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGS-GSGTDFTLTISNLEPEDF 82 (143)
T ss_dssp EECSEE-EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEECSCCGGGC
T ss_pred ECCCEE-EEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEE-ccCCEEEEEEccCcccCC
Confidence 344444 8899999999999998777789999842 2221 13567664 334577899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEee
Q psy5280 174 GMYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 174 G~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
|.|.|.+.+........+.|.|.
T Consensus 83 G~Y~C~~~~~~~~fg~gt~L~V~ 105 (143)
T 3u6r_L 83 AVYYCQQRSDWVTFGGGTKVEIK 105 (143)
T ss_dssp EEEEEEECSSBCEECCCEEEEEC
T ss_pred EEEEEEEecCCCEECCCEEEEEC
Confidence 99999998764222233556664
No 439
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.75 E-value=2.3e-08 Score=77.75 Aligned_cols=88 Identities=15% Similarity=0.110 Sum_probs=61.4
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EEc---c-------------cCCcEEEEEee-CCeEEEEEc
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--ELI---E-------------MGGRYDSSYTR-NGQATLFIN 166 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~l---~-------------~~~r~~i~~~~-~~~~~L~I~ 166 (202)
.++... .+.+|+++.|.|.+.|.| .+.+.|+|+. ..+ . ...|+.+.... .....|.|.
T Consensus 5 ~qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (215)
T 1c5d_H 5 LESGPG-LVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMN 83 (215)
T ss_dssp EEECCC-EECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEES
T ss_pred EcCCCe-eecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEEC
Confidence 345555 889999999999999875 4789999852 211 0 13566663322 235689999
Q ss_pred cCCCCCCEEEEEEEEeCCce---EEEEEEEEee
Q psy5280 167 KMLDRDVGMYEALASNEHGT---ARQRVSSGNP 196 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G~---~~~~~~L~V~ 196 (202)
++..+|+|.|.|.+.|..|. ....+.|.|.
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~ 116 (215)
T 1c5d_H 84 SLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVS 116 (215)
T ss_dssp SCCGGGCEEEEEEECCSSSCSCCBCCCEEEEEC
T ss_pred CCCcccCEEEEEEEecCCcccceEcCCEEEEec
Confidence 99999999999999997532 1223456665
No 440
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.74 E-value=3.3e-08 Score=78.74 Aligned_cols=70 Identities=14% Similarity=0.159 Sum_probs=45.2
Q ss_pred ecCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEEEEEeeCCe----EEEEEccCCCCCCEEEEEEEEeCCce
Q psy5280 117 IKNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYDSSYTRNGQ----ATLFINKMLDRDVGMYEALASNEHGT 186 (202)
Q Consensus 117 ~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~i~~~~~~~----~~L~I~~~~~~D~G~Y~C~a~N~~G~ 186 (202)
..|+.+.|.|.+.|. |.+ .|+|+|||..+.............+. ..|.|......|.|.|+|.|.|....
T Consensus 136 ~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 136 MTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp GGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred hcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 357899999999995 443 79999999988542111111111111 23444444445689999999998854
No 441
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.74 E-value=2.6e-08 Score=79.62 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=63.3
Q ss_pred CCCeEEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCCEEcccCC-cEEEEEeeCCeEEEEEccCCCCCCEEEEEEE
Q psy5280 102 QAPRFLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGG-RYDSSYTRNGQATLFINKMLDRDVGMYEALA 180 (202)
Q Consensus 102 ~~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~-r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a 180 (202)
.+|.+...+.. .+.+|++|.|.|.+.+ +.+.+.|+|++..+.... ... .......|.|.++..+|+|.|.|.+
T Consensus 6 ~kP~i~~~P~~--~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~---~~~~~~~L~I~~v~~~DsG~Y~C~~ 79 (242)
T 1p6f_A 6 PKPFIWAEPHF--MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPP---ERINKVKFYIPDMNSRMAGQYSCIY 79 (242)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSC---TTCCEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEeeCCC--ccCCCCcEEEEEeeCC-CCcEEEEEECCCcccccccccc---CCcceeEEEecCCCcccCeEEEEEE
Confidence 36777666654 6889999999999875 456799999998764210 000 0134678999999999999999999
Q ss_pred EeCCceE--EEEEEEEee
Q psy5280 181 SNEHGTA--RQRVSSGNP 196 (202)
Q Consensus 181 ~N~~G~~--~~~~~L~V~ 196 (202)
.|..+.. +..+.|.|.
T Consensus 80 ~~~~~~s~~S~~~~L~V~ 97 (242)
T 1p6f_A 80 RVGELWSEPSNLLDLVVT 97 (242)
T ss_dssp EETTEECCCCCCEEEEEE
T ss_pred ecCCccccCCcceEEEee
Confidence 9876532 334556554
No 442
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.73 E-value=5.8e-08 Score=76.57 Aligned_cols=76 Identities=13% Similarity=0.190 Sum_probs=55.4
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--E---Ecc------------cCCcEEEEEeeCCeEEEEEccCC
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--E---LIE------------MGGRYDSSYTRNGQATLFINKML 169 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~---~l~------------~~~r~~i~~~~~~~~~L~I~~~~ 169 (202)
+..+... .+.+|+++.|.|.+. .+.+.+.|+|+. . .+. ...|+.+.........|.|.++.
T Consensus 3 ~q~p~~v-~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 80 (238)
T 1bec_A 3 TQSPRNK-VAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELAT 80 (238)
T ss_dssp EEECSEE-EEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCC
T ss_pred ccCCCee-EEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCC
Confidence 3445555 889999999999985 467899999853 1 110 13455553222345789999999
Q ss_pred CCCCEEEEEEEEeCC
Q psy5280 170 DRDVGMYEALASNEH 184 (202)
Q Consensus 170 ~~D~G~Y~C~a~N~~ 184 (202)
.+|+|.|.|.+.|..
T Consensus 81 ~~D~G~Y~C~~~~~~ 95 (238)
T 1bec_A 81 PSQTSVYFCASGGGR 95 (238)
T ss_dssp GGGCEEEEEEEESCT
T ss_pred cccCEEEEEEEecCC
Confidence 999999999999974
No 443
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.73 E-value=6.2e-09 Score=82.99 Aligned_cols=78 Identities=9% Similarity=0.004 Sum_probs=58.0
Q ss_pred CCeEEeccCCeeE-EecCCeEEEEEEEEee---cCC-ceEEEeCCEEcccC----------CcEEEEEeeCCeEEEEEcc
Q psy5280 103 APRFLNQEHDTQY-GIKNENSSLFWFVYGY---PKP-KVSFYFNDELIEMG----------GRYDSSYTRNGQATLFINK 167 (202)
Q Consensus 103 ~P~fi~~~~~~~~-v~~G~~v~L~C~v~G~---P~P-~i~W~k~g~~l~~~----------~r~~i~~~~~~~~~L~I~~ 167 (202)
+..|+..+... . +.+|+++.|.|.+.|. |.| .|+|+|++..+... .++. ....|.|.+
T Consensus 16 P~v~~~pp~~~-~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~------~~s~L~I~~ 88 (239)
T 1i1c_A 16 SSVFIFPPKTK-DVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLR------SVSELPIVE 88 (239)
T ss_dssp -CEEEECCCHH-HHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEE------EEEEEECCH
T ss_pred CEEEEECCChH-HhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEE------EEEEEEEEh
Confidence 44455544333 3 6789999999999998 877 89999998665421 1111 135799999
Q ss_pred CCCCCCEEEEEEEEeCCceE
Q psy5280 168 MLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~~G~~ 187 (202)
+..+|+|.|.|.+.|..|..
T Consensus 89 ~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 89 RDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp HHHHTTCCEEEEEECSSSSS
T ss_pred hHccCCCeEEEEEecccCCC
Confidence 99999999999999998864
No 444
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.73 E-value=1.1e-07 Score=82.37 Aligned_cols=72 Identities=10% Similarity=-0.005 Sum_probs=51.1
Q ss_pred EEecCCeEEEEEEEEeecC--CceEEEeCCEEcccCCcEEE--EEe---eCC----eEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 115 YGIKNENSSLFWFVYGYPK--PKVSFYFNDELIEMGGRYDS--SYT---RNG----QATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~--P~i~W~k~g~~l~~~~r~~i--~~~---~~~----~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.+.+|+.+.|.|.+.|.++ +.|+|+|+|..+........ ... ..+ ...|.|......|.|.|+|.|.|.
T Consensus 361 ~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~ 440 (475)
T 1iga_A 361 ELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHE 440 (475)
T ss_pred HhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcC
Confidence 3567999999999999643 48999999998875531110 001 011 245777777778899999999998
Q ss_pred Cce
Q psy5280 184 HGT 186 (202)
Q Consensus 184 ~G~ 186 (202)
...
T Consensus 441 ~l~ 443 (475)
T 1iga_A 441 ALP 443 (475)
T ss_pred CCC
Confidence 764
No 445
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.73 E-value=4e-08 Score=70.88 Aligned_cols=92 Identities=11% Similarity=-0.020 Sum_probs=61.8
Q ss_pred EeccCCeeEEecCCeEEEEEEEE-------eecCCceEEEeCCE------Eccc-----------CCcEEEEEe-eCCeE
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVY-------GYPKPKVSFYFNDE------LIEM-----------GGRYDSSYT-RNGQA 161 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~-------G~P~P~i~W~k~g~------~l~~-----------~~r~~i~~~-~~~~~ 161 (202)
+..+... .+.+|++|.|.|.+. +...+.+.|++... .+.. ..|+.+... .....
T Consensus 10 ~q~p~~v-~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 88 (132)
T 1nko_A 10 LTMQSSV-TVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNC 88 (132)
T ss_dssp EEECSEE-EEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBC
T ss_pred EeCCCEE-EEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCce
Confidence 3445555 899999999999997 33557899999753 1211 246665211 12345
Q ss_pred EEEEccCCCCCCEEEEEEEEeCCceE---EEEEEEEeecCC
Q psy5280 162 TLFINKMLDRDVGMYEALASNEHGTA---RQRVSSGNPAQG 199 (202)
Q Consensus 162 ~L~I~~~~~~D~G~Y~C~a~N~~G~~---~~~~~L~V~~~~ 199 (202)
+|.|.++..+|+|.|.|.+.+..... ...+.|.|.+..
T Consensus 89 sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~~l~V~~~~ 129 (132)
T 1nko_A 89 TLSIRDARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTALT 129 (132)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEECTTSCEEEEEECCC
T ss_pred EEEEcccCcccCeeEEEEEEcCCCcccccCCceEEEecccC
Confidence 89999999999999999998864211 124677777654
No 446
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.72 E-value=1.1e-07 Score=66.97 Aligned_cols=75 Identities=13% Similarity=0.122 Sum_probs=55.1
Q ss_pred eccCCeeEEecCCeEEEEEEEEee-cCCceEEEeCC--E---Ecc------------cCCcEEEEEe-eCCeEEEEEccC
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGY-PKPKVSFYFND--E---LIE------------MGGRYDSSYT-RNGQATLFINKM 168 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~-P~P~i~W~k~g--~---~l~------------~~~r~~i~~~-~~~~~~L~I~~~ 168 (202)
..+... .+.+|++|.|.|.+.+. +.+.+.|++.. . .|. ...|+.+... ......|.|.++
T Consensus 5 q~p~~~-~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 83 (116)
T 1tvd_A 5 QSSPDQ-TVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPV 83 (116)
T ss_dssp CCSCCE-EEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSC
T ss_pred cCCCcE-EEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccC
Confidence 334555 88999999999999865 56789999853 1 111 1456666432 234568999999
Q ss_pred CCCCCEEEEEEEEeC
Q psy5280 169 LDRDVGMYEALASNE 183 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~ 183 (202)
..+|+|.|.|.+.+.
T Consensus 84 ~~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 84 RTEDSATYYCAFTLP 98 (116)
T ss_dssp CGGGCEEEEEEEECT
T ss_pred ChHHCEEEEEEEeCC
Confidence 999999999999984
No 447
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.72 E-value=2.3e-09 Score=83.32 Aligned_cols=83 Identities=14% Similarity=0.058 Sum_probs=60.6
Q ss_pred EEecCCeEEEEEEEEe-ecCCc----eEEEeCCEEcc-------------cCCcEEEEEe----eCCeEEEEEccCCCCC
Q psy5280 115 YGIKNENSSLFWFVYG-YPKPK----VSFYFNDELIE-------------MGGRYDSSYT----RNGQATLFINKMLDRD 172 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G-~P~P~----i~W~k~g~~l~-------------~~~r~~i~~~----~~~~~~L~I~~~~~~D 172 (202)
.+.+|+++.|.|.+.+ .+.+. |.|+|++.... ...|+.+... ......|.|.++..+|
T Consensus 10 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D 89 (221)
T 3eow_R 10 PGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVED 89 (221)
T ss_dssp CCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCC
T ss_pred EEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHH
Confidence 6788999999999954 55555 99999864221 1344444210 1135689999999999
Q ss_pred CEEEEEEEEeCC-ceEEEEEEEEeec
Q psy5280 173 VGMYEALASNEH-GTARQRVSSGNPA 197 (202)
Q Consensus 173 ~G~Y~C~a~N~~-G~~~~~~~L~V~~ 197 (202)
+|.|+|.+.|.. |.....+.|.|.+
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~L~V~~ 115 (221)
T 3eow_R 90 EGSYTCLFVTFPQGSRSVDIWLRVLA 115 (221)
T ss_dssp CSCBEEEEEESSSCSCEEECCCCCCC
T ss_pred CeEEEEEEEeCCCCceEEEEEEEEEE
Confidence 999999999987 7777777776654
No 448
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.71 E-value=2.9e-08 Score=79.17 Aligned_cols=75 Identities=11% Similarity=0.074 Sum_probs=55.3
Q ss_pred EEecCCeEEEEEEEEe-ecCC-ceEEEeCCEEcc--------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 115 YGIKNENSSLFWFVYG-YPKP-KVSFYFNDELIE--------MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~--------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
.+..|+.+.|.|.+.| .|.| .++|++++..+. ....+.+ .+.|.|......| |.|+|.|.|..
T Consensus 135 ~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~------~s~L~i~~~~~~d-g~ytC~v~~~~ 207 (253)
T 3liz_H 135 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL------SSSVTVPSSTWPS-ETVTCNVAHPA 207 (253)
T ss_dssp ----CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEE------EEEEEEETTSTTT-SCCEEEEEEGG
T ss_pred ccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEE------EEEEEEcHHHCCC-ceEEEEEEECC
Confidence 4557999999999999 7777 899999987331 1133333 3679999999999 99999999999
Q ss_pred ceEEEEEEEEee
Q psy5280 185 GTARQRVSSGNP 196 (202)
Q Consensus 185 G~~~~~~~L~V~ 196 (202)
+.....+.|.+.
T Consensus 208 ~~~~~~~~~~~~ 219 (253)
T 3liz_H 208 SSTKVDKKIVPR 219 (253)
T ss_dssp GTEEEEEECCCC
T ss_pred CCcceEEEecCc
Confidence 987766666543
No 449
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.71 E-value=5.2e-08 Score=75.73 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=52.5
Q ss_pred ecCCeEEEEEEEEe-ecC-C-ceEEEeCCEEcc----------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 117 IKNENSSLFWFVYG-YPK-P-KVSFYFNDELIE----------MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 117 ~~G~~v~L~C~v~G-~P~-P-~i~W~k~g~~l~----------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.+|+.+.|.|.+.| .|. | .++|++++..+. ....+.+ ...|.|......|.|.|+|.|.|.
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~d~g~ytC~v~~~ 209 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTT------SSQLTLPATQCLAGKSVTCHVKHY 209 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEE------EEEEEEEGGGSCTTCEEEEEEEET
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEE------EEEEEECHHHcCCCCeEEEEEEEC
Confidence 57999999999999 776 4 899999987662 2333433 346899999999999999999999
Q ss_pred CceEE
Q psy5280 184 HGTAR 188 (202)
Q Consensus 184 ~G~~~ 188 (202)
.+...
T Consensus 210 ~~~~~ 214 (221)
T 3m8o_H 210 TNPSQ 214 (221)
T ss_dssp TSCCE
T ss_pred CCCce
Confidence 87654
No 450
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.70 E-value=6.2e-08 Score=78.12 Aligned_cols=77 Identities=13% Similarity=0.107 Sum_probs=57.7
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--E---Ec--------------ccCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--E---LI--------------EMGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~---~l--------------~~~~r~~i~~~~-~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|.+ .+.+.|+|.. . .+ ....|+.+.... .....|.|
T Consensus 5 ~qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (257)
T 3bn9_D 5 VQSGGG-LVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQM 83 (257)
T ss_dssp EEECCE-EECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EccCCE-EEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEE
Confidence 345555 789999999999999876 6889999853 1 11 013566663321 34578999
Q ss_pred ccCCCCCCEEEEEEEEeCCc
Q psy5280 166 NKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G 185 (202)
.++..+|+|.|.|.+.|..|
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~g 103 (257)
T 3bn9_D 84 SSLRAEDTAVYYCARPYLTY 103 (257)
T ss_dssp ESCCGGGCEEEEEEEECCSS
T ss_pred CCCChhhCEEEEEEEecCCC
Confidence 99999999999999999875
No 451
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.70 E-value=3.3e-08 Score=77.50 Aligned_cols=77 Identities=8% Similarity=0.029 Sum_probs=52.6
Q ss_pred EEecCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEEEEEeeC---CeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 115 YGIKNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYDSSYTRN---GQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~i~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
.+.+|+.+.|.|.+.|. |.| .|.|++++..+.......+. ... ....|.|..+...| |.|+|.|.|..|....
T Consensus 141 ~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~ 218 (228)
T 3bae_H 141 GDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVL-QSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKV 218 (228)
T ss_dssp ---CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEE-ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred cccCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCcee-CCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCE
Confidence 35689999999999997 888 99999998754211111110 000 13568888888756 9999999999998765
Q ss_pred EEEE
Q psy5280 190 RVSS 193 (202)
Q Consensus 190 ~~~L 193 (202)
...+
T Consensus 219 ~~~~ 222 (228)
T 3bae_H 219 DKKI 222 (228)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5543
No 452
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.69 E-value=1.3e-07 Score=68.07 Aligned_cols=90 Identities=16% Similarity=0.170 Sum_probs=62.5
Q ss_pred cCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--C---EEcc---------cCCcEEEEEeeCCeEEEEEccCCCCCC
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--D---ELIE---------MGGRYDSSYTRNGQATLFINKMLDRDV 173 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g---~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~D~ 173 (202)
+... .+.+|++|.|.|.+.+.+ ...+.|++. + +.|. ...|+.+.. ......|.|.++..+|+
T Consensus 7 p~~v-~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~-~~~~~sL~I~~l~~~Ds 84 (123)
T 3t0v_A 7 SPSV-SGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSK-SGTSASLAISGLRSEDE 84 (123)
T ss_dssp CCCE-EECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEECSCCGGGC
T ss_pred cCeE-EEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEc-cCCEEEEEECCCCHHHC
Confidence 4455 899999999999998765 367999984 2 1121 135676643 34577999999999999
Q ss_pred EEEEEEEEeCCce---EEEEEEEEeecCCCC
Q psy5280 174 GMYEALASNEHGT---ARQRVSSGNPAQGSG 201 (202)
Q Consensus 174 G~Y~C~a~N~~G~---~~~~~~L~V~~~~~~ 201 (202)
|.|.|.+.+..+. -.....|.|...-+|
T Consensus 85 G~Y~C~~~~~~~~~~~fG~GT~l~V~~~~~~ 115 (123)
T 3t0v_A 85 ADYYCLSWDDSLNGWVFGGGTKVTVLDAASG 115 (123)
T ss_dssp EEEEEEEEETTTTEEEEBCCEEEEECCCC--
T ss_pred EEEEEEEEcCCCCceEECCCEEEEEccCCCC
Confidence 9999999886521 122356777665443
No 453
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.69 E-value=3.4e-08 Score=87.51 Aligned_cols=71 Identities=14% Similarity=0.101 Sum_probs=50.0
Q ss_pred EecCCeE-EEEEEEEe-ecCCceEEEeCCEEcccC-CcEEEEE--ee---CC----eEEEEEccCCCCC-CEEEEEEEEe
Q psy5280 116 GIKNENS-SLFWFVYG-YPKPKVSFYFNDELIEMG-GRYDSSY--TR---NG----QATLFINKMLDRD-VGMYEALASN 182 (202)
Q Consensus 116 v~~G~~v-~L~C~v~G-~P~P~i~W~k~g~~l~~~-~r~~i~~--~~---~~----~~~L~I~~~~~~D-~G~Y~C~a~N 182 (202)
+.+|+.. .|.|.+.| .|.|.|+|++++..|... .++.+.. .. .+ .++|.|..+..+| .|.|+|.|.|
T Consensus 483 ~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n 562 (581)
T 3o3u_N 483 LTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSP 562 (581)
T ss_dssp ECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEEC
T ss_pred cccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEec
Confidence 4455554 66999998 599999999999998753 3332211 11 11 2469999988555 7899999999
Q ss_pred CCce
Q psy5280 183 EHGT 186 (202)
Q Consensus 183 ~~G~ 186 (202)
..+.
T Consensus 563 ~~~~ 566 (581)
T 3o3u_N 563 GLPR 566 (581)
T ss_dssp SSCS
T ss_pred cCCC
Confidence 9754
No 454
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.68 E-value=6.9e-08 Score=68.38 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=53.5
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEee-cCCceEEEeCCE----Eccc-C----CcEEEEEe----eCCeEEEEEccCCCC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGY-PKPKVSFYFNDE----LIEM-G----GRYDSSYT----RNGQATLFINKMLDR 171 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~-P~P~i~W~k~g~----~l~~-~----~r~~i~~~----~~~~~~L~I~~~~~~ 171 (202)
+...+... .+.+|+++.|.|.+.+. |.+.+.|+|++. .+.. . .++..... ......|.|.++..+
T Consensus 10 v~q~p~~~-~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 88 (120)
T 2yz1_A 10 VTQPEKSV-SVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPE 88 (120)
T ss_dssp EECCSSEE-EECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGG
T ss_pred EECCCceE-EEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHH
Confidence 33334444 88999999999999876 678899999751 1111 0 12211111 122357999999999
Q ss_pred CCEEEEEEEEeCC
Q psy5280 172 DVGMYEALASNEH 184 (202)
Q Consensus 172 D~G~Y~C~a~N~~ 184 (202)
|+|.|.|.+.+..
T Consensus 89 DsG~Y~C~~~~~~ 101 (120)
T 2yz1_A 89 DAGTYYCVKFQKG 101 (120)
T ss_dssp GCEEEEEEEEECC
T ss_pred HCEEEEEEEEcCC
Confidence 9999999999864
No 455
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.68 E-value=2.1e-08 Score=78.50 Aligned_cols=67 Identities=15% Similarity=0.198 Sum_probs=50.9
Q ss_pred EecCCeEEEEEEEEee-cCC-ceEEEeCCEEccc---------CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCC
Q psy5280 116 GIKNENSSLFWFVYGY-PKP-KVSFYFNDELIEM---------GGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~---------~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
+.+|+.+.|.|.+.|. |.| .|+|++++..+.. ...+.+ ...|.|..+...| |.|+|.|.|..
T Consensus 140 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~------~s~L~i~~~~~~~-g~Y~C~a~n~~ 212 (225)
T 1op3_H 140 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL------SSVVTVPSSSLGT-QTYICNVNHKP 212 (225)
T ss_dssp CCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEE------EEEEEEEGGGTTC-CCCCEEEEEGG
T ss_pred ccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEE------EEEEEEechhcCC-CcEEEEEEcCC
Confidence 3579999999999997 777 8999999875421 111222 3468999988888 99999999988
Q ss_pred ceEEE
Q psy5280 185 GTARQ 189 (202)
Q Consensus 185 G~~~~ 189 (202)
+....
T Consensus 213 ~~~~~ 217 (225)
T 1op3_H 213 SNTKV 217 (225)
T ss_dssp GTEEE
T ss_pred CCccE
Confidence 76543
No 456
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.68 E-value=5.6e-08 Score=68.34 Aligned_cols=74 Identities=16% Similarity=0.158 Sum_probs=55.3
Q ss_pred ccCCeeEEecCCeEEEEEEEEeec-----CCceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEEEEccCC
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYP-----KPKVSFYFND--E---LIE---------MGGRYDSSYTRNGQATLFINKML 169 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P-----~P~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L~I~~~~ 169 (202)
.+... .+.+|++|.|.|.+.+.+ .+.+.|++.. . .|. ...|+.+.. ......|.|.++.
T Consensus 7 ~p~~~-~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~v~ 84 (113)
T 1dlf_L 7 TPLSL-PVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG-SGTDFTLKISRVE 84 (113)
T ss_dssp ECSEE-EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEECSCC
T ss_pred eCCEE-EEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEc-cCCEEEEEECCCC
Confidence 34444 889999999999998876 4789999842 1 121 135666633 3456789999999
Q ss_pred CCCCEEEEEEEEeCC
Q psy5280 170 DRDVGMYEALASNEH 184 (202)
Q Consensus 170 ~~D~G~Y~C~a~N~~ 184 (202)
.+|+|.|.|.+.+..
T Consensus 85 ~~DsG~Y~C~~~~~~ 99 (113)
T 1dlf_L 85 AEDLGVYFCSQSTHV 99 (113)
T ss_dssp GGGCEEEEEEECSSS
T ss_pred hHHCEEEEEEEecCC
Confidence 999999999998763
No 457
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.67 E-value=1.3e-07 Score=76.08 Aligned_cols=84 Identities=12% Similarity=0.078 Sum_probs=58.3
Q ss_pred EEecCCeEEEEEEEEeecC--CceEEEeCC--E---Ecc--------------cCCcEEEEEe-eCCeEEEEEccCCCCC
Q psy5280 115 YGIKNENSSLFWFVYGYPK--PKVSFYFND--E---LIE--------------MGGRYDSSYT-RNGQATLFINKMLDRD 172 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~--P~i~W~k~g--~---~l~--------------~~~r~~i~~~-~~~~~~L~I~~~~~~D 172 (202)
.+.+|+++.|.|.+.+.|. +.+.|+|+. . .+. ...++.+... ......|.|.++..+|
T Consensus 149 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 228 (264)
T 2gjj_A 149 VVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSED 228 (264)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCccc
Confidence 6889999999999999874 789999863 2 121 0345555322 2235789999999999
Q ss_pred CEEEEEEEEeCC---ce--EEEEEEEEeecC
Q psy5280 173 VGMYEALASNEH---GT--ARQRVSSGNPAQ 198 (202)
Q Consensus 173 ~G~Y~C~a~N~~---G~--~~~~~~L~V~~~ 198 (202)
+|.|.|.|.|.. .. -.....|.|..+
T Consensus 229 sG~Y~C~a~n~~~~~~~~~fg~gt~l~v~~~ 259 (264)
T 2gjj_A 229 SADYYCVRSGNYEEYAMDYWGQGTSVTVSSH 259 (264)
T ss_dssp CEEEEEEEECSGGGCSCCCBCCCEEEEEC--
T ss_pred CEEEEEEEecCCCCcceEEECCCEEEEEecc
Confidence 999999999951 11 123456777654
No 458
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.67 E-value=2.4e-08 Score=77.20 Aligned_cols=82 Identities=15% Similarity=0.080 Sum_probs=50.0
Q ss_pred eEEeccCCeeE-EecCCeEEEEEEEEeecC--C--ceEEEeCCEEcccCCcEEEEEeeCCe----EEEEEccCCCCCCEE
Q psy5280 105 RFLNQEHDTQY-GIKNENSSLFWFVYGYPK--P--KVSFYFNDELIEMGGRYDSSYTRNGQ----ATLFINKMLDRDVGM 175 (202)
Q Consensus 105 ~fi~~~~~~~~-v~~G~~v~L~C~v~G~P~--P--~i~W~k~g~~l~~~~r~~i~~~~~~~----~~L~I~~~~~~D~G~ 175 (202)
.++..+... . +.+|+++.|.|.+.|.|+ | .|+|+|++..+.............+. ..|.|......|+|.
T Consensus 4 v~~~pps~~-~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~ 82 (207)
T 1l6x_A 4 VFLFPPKPK-DTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKE 82 (207)
T ss_dssp EEEECCCHH-HHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred EEEeCcChH-HheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCce
Confidence 344444333 3 368999999999999863 3 89999999877543110000001111 123332333344999
Q ss_pred EEEEEEeCCceE
Q psy5280 176 YEALASNEHGTA 187 (202)
Q Consensus 176 Y~C~a~N~~G~~ 187 (202)
|+|.|.|..|..
T Consensus 83 Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 83 YKCKVSNKALPA 94 (207)
T ss_dssp EEEEEECTTSSS
T ss_pred EEEEEEcCcCCc
Confidence 999999998865
No 459
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.66 E-value=6.4e-08 Score=68.84 Aligned_cols=84 Identities=12% Similarity=-0.007 Sum_probs=59.6
Q ss_pred eEEecCCeEEEEEEEEeec---CCceEEEeCC--E---Ecc---------cCCcEEEEEeeCCeEEEEEccCCCCCCEEE
Q psy5280 114 QYGIKNENSSLFWFVYGYP---KPKVSFYFND--E---LIE---------MGGRYDSSYTRNGQATLFINKMLDRDVGMY 176 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G~P---~P~i~W~k~g--~---~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y 176 (202)
..+.+|+++.|.|.+.+.+ .+.+.|++.. . .|. ...|+.+.. ......|.|.++..+|+|.|
T Consensus 10 ~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~~~~~DsG~Y 88 (120)
T 1oaq_L 10 LTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-IGNKAALTITGAQTEDEAIY 88 (120)
T ss_dssp EEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEE-ETTEEEEEEESCCGGGCEEE
T ss_pred EEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEec-CCCeEEEEECCCChhhCeEE
Confidence 3889999999999998876 5789999842 1 111 135676643 34567899999999999999
Q ss_pred EEEEEeCCceE-EEEEEEEeecC
Q psy5280 177 EALASNEHGTA-RQRVSSGNPAQ 198 (202)
Q Consensus 177 ~C~a~N~~G~~-~~~~~L~V~~~ 198 (202)
.|.+.+..... .....|.|...
T Consensus 89 ~C~~~~~~~~~fg~gt~L~V~~~ 111 (120)
T 1oaq_L 89 FCALWYSNHLVFGGGTKLTVLGQ 111 (120)
T ss_dssp EEEEEETTEEEECCCEEEEECC-
T ss_pred EEEEccCCCcEECCCEEEEEcCC
Confidence 99999874321 12346666543
No 460
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.66 E-value=1.5e-07 Score=68.77 Aligned_cols=89 Identities=16% Similarity=0.098 Sum_probs=63.4
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeC---CEEc----ccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEE
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN---DELI----EMGGRYDSSYTRNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~---g~~l----~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
+...+... .+.+|++|.|.|.+.+. ...+.|++. |+.+ ...+|+.... ......|.|.++..+|+|.|.|
T Consensus 21 v~Q~p~~~-~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~-~~~~~~L~I~~~~~~Dsg~Y~C 97 (134)
T 3kg5_A 21 IWQSPRFI-ARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQ-NESLATLTIQGIRFEDNGIYFC 97 (134)
T ss_dssp CEEECSEE-EEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEE-CSSEEEEEECSCCTTTCEEEEE
T ss_pred EEEeCCEE-EEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEc-cCCEEEEEECCCCcCcCEEEEE
Confidence 33444445 88999999999999875 578999987 3322 2356777643 3456789999999999999999
Q ss_pred EEEeCCc---eEEEEEEEEeec
Q psy5280 179 LASNEHG---TARQRVSSGNPA 197 (202)
Q Consensus 179 ~a~N~~G---~~~~~~~L~V~~ 197 (202)
.+.+..+ .......|.|..
T Consensus 98 ~~~~~~~~~~~fg~GT~L~V~~ 119 (134)
T 3kg5_A 98 QQKCNNTSEVYQGCGTELRVMG 119 (134)
T ss_dssp EEECTTTCCEEECCCEEEEEEC
T ss_pred EEEcCCCCceEECCCEEEEEec
Confidence 9998743 122235666654
No 461
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.66 E-value=2.1e-07 Score=65.89 Aligned_cols=88 Identities=9% Similarity=-0.030 Sum_probs=61.0
Q ss_pred ccCCeeEEecCCeEEEEEEEEeec-CCceEEEeC--CE---Ec----------ccCCcEEEEEe-eCCeEEEEEccCCCC
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYP-KPKVSFYFN--DE---LI----------EMGGRYDSSYT-RNGQATLFINKMLDR 171 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P-~P~i~W~k~--g~---~l----------~~~~r~~i~~~-~~~~~~L~I~~~~~~ 171 (202)
.+... .+.+|+++.|.|.+.+.. ...+.|++. +. .| ....|+.+... ......|.|.++..+
T Consensus 5 ~p~~~-~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~ 83 (117)
T 3bp6_A 5 YPAWL-TVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRN 83 (117)
T ss_dssp ECSEE-EECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGG
T ss_pred cCCcE-EEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHH
Confidence 34444 889999999999998754 467999984 21 11 12356766332 234568999999999
Q ss_pred CCEEEEEEEEeCCce----EEEEEEEEeec
Q psy5280 172 DVGMYEALASNEHGT----ARQRVSSGNPA 197 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~----~~~~~~L~V~~ 197 (202)
|+|.|.|.+.+..+. ....+.|.|..
T Consensus 84 Dsg~Y~C~~~~~~~~~~~~~~~~t~L~V~~ 113 (117)
T 3bp6_A 84 DSGIYLCGAISLHPKLKIEESPGAELVVTE 113 (117)
T ss_dssp GCEEEEEEEEECSSSCEEEECCCEEEEEC-
T ss_pred HCEEEEEEEEecCCccccccCCcEEEEEEh
Confidence 999999999886543 22456777764
No 462
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.65 E-value=8.7e-08 Score=67.70 Aligned_cols=68 Identities=10% Similarity=0.102 Sum_probs=51.6
Q ss_pred EEecCCeEEEEEEEEee-cCCceEEEeCC--E---Ecc----------cCCcEEEEE-eeCCeEEEEEccCCCCCCEEEE
Q psy5280 115 YGIKNENSSLFWFVYGY-PKPKVSFYFND--E---LIE----------MGGRYDSSY-TRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~-P~P~i~W~k~g--~---~l~----------~~~r~~i~~-~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
.+.+|++|.|.|.+.+. +.+.+.|++.. . .|. ...|+.+.. .......|.|.++..+|+|.|.
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 90 (116)
T 1fo0_A 11 SVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDSAVYF 90 (116)
T ss_dssp EEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred EEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEE
Confidence 88999999999999887 66689999842 1 110 124666632 2234568999999999999999
Q ss_pred EEEEe
Q psy5280 178 ALASN 182 (202)
Q Consensus 178 C~a~N 182 (202)
|.+.+
T Consensus 91 C~~~~ 95 (116)
T 1fo0_A 91 CAMRG 95 (116)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99987
No 463
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.65 E-value=9.6e-08 Score=81.84 Aligned_cols=88 Identities=13% Similarity=0.121 Sum_probs=62.8
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeC--CEEcc-----------------cCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFN--DELIE-----------------MGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~--g~~l~-----------------~~~r~~i~~~~-~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|.+ .+.+.|+|+ +..+. ...|+.+.... .....|.|
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (444)
T 1igt_B 5 QESGGG-LVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQM 83 (444)
T ss_dssp EEECCC-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEE
T ss_pred ecCCCe-EEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEE
Confidence 345555 889999999999999875 678999985 32210 13467663321 23578999
Q ss_pred ccCCCCCCEEEEEEEEeCCceE---EEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNEHGTA---RQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~~---~~~~~L~V~ 196 (202)
.++..+|+|.|.|.|.|..|.. ...+.|.|.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 117 (444)
T 1igt_B 84 SRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVS 117 (444)
T ss_dssp CSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEEC
T ss_pred CCCCHHHCEEEEEEEecCCcccccccCcEEEEec
Confidence 9999999999999999987642 223456665
No 464
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.64 E-value=4.7e-07 Score=71.24 Aligned_cols=142 Identities=9% Similarity=-0.016 Sum_probs=82.8
Q ss_pred eeeeecCCCCC--eeeecCCCeec-----CCCCceeeeccccccCCCCC-CCC----------------CCCeEEeccCC
Q psy5280 57 TQEKLNPERPK--FEPYLPPGVPF-----HPDKSFYFPRDFDLERPPRE-GYA----------------QAPRFLNQEHD 112 (202)
Q Consensus 57 ~~~~~~~~~~~--~~~w~~~g~~~-----~p~~~~~~~~~~~ie~~~~~-~~~----------------~~P~fi~~~~~ 112 (202)
+.|.. +.+.+ .|.|++....+ ......+...++..++.|.| |.+ .+|..+....
T Consensus 27 L~C~a-~~p~P~~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~~P~~~~i~~- 104 (210)
T 1gsm_A 27 LTCRL-ACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSP- 104 (210)
T ss_dssp EEEEE-CCSSTTCEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCSEEEEES-
T ss_pred EEEEC-CCCCCCcceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEecCCCcEEcc-
Confidence 44777 55555 89998864332 12223344466666665554 321 3444332111
Q ss_pred eeEEecCCeEEEEEEEEee-cC----CceEEEeCCEEcccCCcEE--EEE-----e--eCC----eEEEEEccCCCCCCE
Q psy5280 113 TQYGIKNENSSLFWFVYGY-PK----PKVSFYFNDELIEMGGRYD--SSY-----T--RNG----QATLFINKMLDRDVG 174 (202)
Q Consensus 113 ~~~v~~G~~v~L~C~v~G~-P~----P~i~W~k~g~~l~~~~r~~--i~~-----~--~~~----~~~L~I~~~~~~D~G 174 (202)
. ....|+.+ |.|.+.|. |. ++|.|+|++..|....... +.. . ... ..+|.+......|.+
T Consensus 105 ~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~ 182 (210)
T 1gsm_A 105 A-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPP 182 (210)
T ss_dssp S-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCS
T ss_pred c-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCc
Confidence 1 34468888 99999996 64 4799999999986432101 100 0 000 123444455555668
Q ss_pred EEEEEEEeCCceEEEEEEEEeecCCCCC
Q psy5280 175 MYEALASNEHGTARQRVSSGNPAQGSGR 202 (202)
Q Consensus 175 ~Y~C~a~N~~G~~~~~~~L~V~~~~~~~ 202 (202)
.|+|.|.+.+-.....-...++...-||
T Consensus 183 ~~tC~a~~~L~~~~~~~~~~~~~~~~~~ 210 (210)
T 1gsm_A 183 ALYCQATMRLPGLELSHRQAIPVLIEGR 210 (210)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEBCTTCC
T ss_pred eEEEEEEeeCCCCcccccccCceEeecC
Confidence 9999999998766666666666666555
No 465
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.64 E-value=1.5e-07 Score=73.06 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=55.3
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--E---Ec----------------ccCCcEEEEEee-CCeEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--E---LI----------------EMGGRYDSSYTR-NGQATL 163 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~---~l----------------~~~~r~~i~~~~-~~~~~L 163 (202)
..+... .+.+|+++.|.|.+.|.+ .+.+.|++.. . .+ ....|+.+.... .....|
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 83 (221)
T 3m8o_H 5 VESGGG-LVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFL 83 (221)
T ss_dssp EEESCE-EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEE
T ss_pred EccCCE-EEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEE
Confidence 344555 789999999999999854 6789999732 1 11 012566664332 345689
Q ss_pred EEccCCCCCCEEEEEEEEeCC
Q psy5280 164 FINKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~~ 184 (202)
.|.++..+|+|.|.|.+.|..
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~ 104 (221)
T 3m8o_H 84 QMNSLKSDDTAMYYCVIRGDV 104 (221)
T ss_dssp EECSCCGGGCEEEEEEEESCT
T ss_pred EECCCCHHHCEEEEEEEECCC
Confidence 999999999999999999874
No 466
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.64 E-value=1.2e-08 Score=79.26 Aligned_cols=57 Identities=11% Similarity=0.152 Sum_probs=47.1
Q ss_pred EecCCeEEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 116 GIKNENSSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 116 v~~G~~v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
+.+|+++.|.|.+ |.|.+.|+|+|..+... ......|.|.++..+|+|.|+|.+.|.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~--------~~~~~~L~i~~v~~~DsG~Y~C~~~~~ 71 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL--------TEDKKKWNLGSNAKDPRGMYQCKGSQN 71 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE--------ESSCCCEEEEEGGGCCEEEEEEESSSS
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC--------CCCCCeEEeCCCCcCCCEEEEEEecCC
Confidence 3579999999998 88999999999887532 123567999999999999999997654
No 467
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.64 E-value=1.3e-07 Score=67.79 Aligned_cols=74 Identities=19% Similarity=0.218 Sum_probs=54.7
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--E----EcccCCcEEEEEe-eCCeEEEEEccCCCCCCEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--E----LIEMGGRYDSSYT-RNGQATLFINKMLDRDVGMYEA 178 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~----~l~~~~r~~i~~~-~~~~~~L~I~~~~~~D~G~Y~C 178 (202)
..+... .+.+|++|.|.|.+.+.. .+.+.|++.. . .+....|+.+... ......|.|.++..+|+|.|.|
T Consensus 5 Q~p~~v-~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C 83 (121)
T 2i24_N 5 QTPQRI-TKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGSKSFSLRINDLTVKDSGTYRC 83 (121)
T ss_dssp EECSEE-EEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred ECCcEE-EEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEecCCCCEEEEEECCCChhhCEEEEE
Confidence 334445 889999999999998763 4579999853 2 2233567765332 2346789999999999999999
Q ss_pred EEEe
Q psy5280 179 LASN 182 (202)
Q Consensus 179 ~a~N 182 (202)
.+..
T Consensus 84 ~~~~ 87 (121)
T 2i24_N 84 KPES 87 (121)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9985
No 468
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.63 E-value=7e-08 Score=78.69 Aligned_cols=77 Identities=12% Similarity=0.127 Sum_probs=56.8
Q ss_pred EeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--E---Ecc--------------cCCcEEEEEe-eCCeEEEE
Q psy5280 107 LNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--E---LIE--------------MGGRYDSSYT-RNGQATLF 164 (202)
Q Consensus 107 i~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~---~l~--------------~~~r~~i~~~-~~~~~~L~ 164 (202)
+.++... .+.+|+++.|.|.+.|.| .+.+.|+|+. . .+. ...|+.+... .....+|.
T Consensus 26 v~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 104 (291)
T 2gki_A 26 LQQSGPE-LVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYME 104 (291)
T ss_dssp EEECCCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEE
T ss_pred EEcCCcE-EecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEE
Confidence 3445555 889999999999999987 5899999852 1 110 1245555322 12357899
Q ss_pred EccCCCCCCEEEEEEEEeCC
Q psy5280 165 INKMLDRDVGMYEALASNEH 184 (202)
Q Consensus 165 I~~~~~~D~G~Y~C~a~N~~ 184 (202)
|.++..+|+|.|.|.+.|..
T Consensus 105 I~~v~~~DsG~Y~C~~~~~~ 124 (291)
T 2gki_A 105 LSSLTSEDSAVYYCARGAYK 124 (291)
T ss_dssp ECSCCGGGCEEEEEEEECGG
T ss_pred ECcCCHHHCEEEEEEEeccc
Confidence 99999999999999999985
No 469
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.63 E-value=2.2e-07 Score=73.16 Aligned_cols=74 Identities=20% Similarity=0.125 Sum_probs=54.8
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--E---Ecc-------------cCCcEEEEEee-CCeEEEEEc
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--E---LIE-------------MGGRYDSSYTR-NGQATLFIN 166 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~---~l~-------------~~~r~~i~~~~-~~~~~L~I~ 166 (202)
.++... .+.+|+++.|.|.+.+.+ .+.+.|+|.. . .+. ...|+.+.... .....|.|.
T Consensus 5 ~qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (232)
T 1dn0_B 5 QQWGAG-LLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLS 83 (232)
T ss_dssp EEECCC-EECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCE-EEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEEC
Confidence 345555 889999999999999876 6789999842 1 110 13567664321 235689999
Q ss_pred cCCCCCCEEEEEEEEe
Q psy5280 167 KMLDRDVGMYEALASN 182 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N 182 (202)
++..+|+|.|.|.+.+
T Consensus 84 ~v~~~D~G~Y~C~~~~ 99 (232)
T 1dn0_B 84 SVTAADTAVYYCARPP 99 (232)
T ss_dssp SCCGGGCEEEEEEECS
T ss_pred CCCcccCEEEEEEEec
Confidence 9999999999999984
No 470
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.62 E-value=9.8e-08 Score=75.21 Aligned_cols=69 Identities=12% Similarity=0.229 Sum_probs=47.8
Q ss_pred cCCeEEEEEEEEee-cCC-ceEEEeCCEEcccCCcEEEEE-e-----eCC----eEEEEEccCCCCC-CEEEEEEEEeCC
Q psy5280 118 KNENSSLFWFVYGY-PKP-KVSFYFNDELIEMGGRYDSSY-T-----RNG----QATLFINKMLDRD-VGMYEALASNEH 184 (202)
Q Consensus 118 ~G~~v~L~C~v~G~-P~P-~i~W~k~g~~l~~~~r~~i~~-~-----~~~----~~~L~I~~~~~~D-~G~Y~C~a~N~~ 184 (202)
+|+.+.|.|.+.|. |.+ .++|+|+|..+.......... . ..+ ...|.|......| .|.|+|.|.|..
T Consensus 138 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~ 217 (245)
T 3nfj_J 138 HTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (245)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CCCceEEEEEEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECC
Confidence 48999999999996 444 688999999886532111000 0 011 2468888887777 679999999987
Q ss_pred ce
Q psy5280 185 GT 186 (202)
Q Consensus 185 G~ 186 (202)
..
T Consensus 218 ~~ 219 (245)
T 3nfj_J 218 LS 219 (245)
T ss_dssp BC
T ss_pred CC
Confidence 64
No 471
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.62 E-value=1.2e-07 Score=76.08 Aligned_cols=75 Identities=13% Similarity=0.172 Sum_probs=54.8
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecC--CceEEEeC--CEEc-------------------ccCCcEEEEEee-CCeEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPK--PKVSFYFN--DELI-------------------EMGGRYDSSYTR-NGQATL 163 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~--P~i~W~k~--g~~l-------------------~~~~r~~i~~~~-~~~~~L 163 (202)
..+.+. .+.+|+++.|.|.+.|.|. +.+.|+|+ +..+ ....++.+.... .....|
T Consensus 156 ~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 234 (268)
T 1x9q_A 156 DETGGG-LVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYL 234 (268)
T ss_dssp EEECCE-EECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEE
T ss_pred ECCCce-EecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEE
Confidence 334455 7889999999999999864 78999985 2211 123566653221 124689
Q ss_pred EEccCCCCCCEEEEEEEEeC
Q psy5280 164 FINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 164 ~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.|.++..+|+|.|.|.|.|.
T Consensus 235 ~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 235 QMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EECSCCGGGCEEEEEEEEET
T ss_pred EECCCCHHHCEEEEEEEccC
Confidence 99999999999999999985
No 472
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.62 E-value=1.2e-07 Score=66.52 Aligned_cols=71 Identities=10% Similarity=0.120 Sum_probs=52.3
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc---------cCCcEEEEEe-eCCeEEEEEccCCCCCCE
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE---------MGGRYDSSYT-RNGQATLFINKMLDRDVG 174 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~---------~~~r~~i~~~-~~~~~~L~I~~~~~~D~G 174 (202)
+... .+.+|++|.|.|.+.+.+.+.+.|++.. ..|. ...|+.+... ......|.|.++..+|+|
T Consensus 7 p~~~-~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG 85 (112)
T 2z35_A 7 GGQV-ALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSA 85 (112)
T ss_dssp CSEE-EEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCS
T ss_pred CCcE-EEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhCE
Confidence 4444 8899999999999998877889999853 1121 1245555311 223467999999999999
Q ss_pred EEEEEEE
Q psy5280 175 MYEALAS 181 (202)
Q Consensus 175 ~Y~C~a~ 181 (202)
.|.|.+.
T Consensus 86 ~Y~C~~~ 92 (112)
T 2z35_A 86 VYYCALS 92 (112)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999998
No 473
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.61 E-value=1.1e-07 Score=66.88 Aligned_cols=84 Identities=13% Similarity=0.061 Sum_probs=59.3
Q ss_pred EEecCCeEEEEEEEEee--cCCceEEEeCC-------EE-cc---------cCCcEEEEE-eeCCeEEEEEccCCCCCCE
Q psy5280 115 YGIKNENSSLFWFVYGY--PKPKVSFYFND-------EL-IE---------MGGRYDSSY-TRNGQATLFINKMLDRDVG 174 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~--P~P~i~W~k~g-------~~-l~---------~~~r~~i~~-~~~~~~~L~I~~~~~~D~G 174 (202)
.+.+|+++.|.|..... ....+.|+|.. .. +. ...|+.+.. ......+|.|.++..+|+|
T Consensus 8 ~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG 87 (115)
T 2or7_A 8 QGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDGG 87 (115)
T ss_dssp EEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCE
T ss_pred EEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHHCE
Confidence 78899999999998753 24679999974 11 11 123444310 0112457999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEeecC
Q psy5280 175 MYEALASNEHGTARQRVSSGNPAQ 198 (202)
Q Consensus 175 ~Y~C~a~N~~G~~~~~~~L~V~~~ 198 (202)
.|.|.+.+........+.|.|.+.
T Consensus 88 ~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (115)
T 2or7_A 88 PYCCVVEIPGAFHFVDYMLEVKPE 111 (115)
T ss_dssp EEEEEECCTTSCEEEEEEEEEESC
T ss_pred EEEEEEECCCceeEEEEEEEEcCC
Confidence 999999986655577778887754
No 474
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.61 E-value=2.3e-07 Score=72.00 Aligned_cols=75 Identities=19% Similarity=0.148 Sum_probs=55.1
Q ss_pred eccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC-----EEcc-------cCCcEEEEEe--eCCeEEEEEccCCCCCC
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND-----ELIE-------MGGRYDSSYT--RNGQATLFINKMLDRDV 173 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g-----~~l~-------~~~r~~i~~~--~~~~~~L~I~~~~~~D~ 173 (202)
..+... .+.+|+++.|.|.+.+.+ +.|.|+|.. ..+. ...|+.+... ......|.|.++..+|+
T Consensus 6 q~p~~v-~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 6 QSPSAL-SLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp ESCSEE-EEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred ECCCeE-EEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 334444 889999999999998764 589999842 1221 2456666332 13457899999999999
Q ss_pred EEEEEEEEeCC
Q psy5280 174 GMYEALASNEH 184 (202)
Q Consensus 174 G~Y~C~a~N~~ 184 (202)
|.|.|.+.|..
T Consensus 84 G~Y~C~~~~~~ 94 (207)
T 1ypz_E 84 GTYFCAADTWH 94 (207)
T ss_dssp EEEEEEEECBC
T ss_pred EEEEEEEecCC
Confidence 99999999874
No 475
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.60 E-value=3.4e-07 Score=64.51 Aligned_cols=73 Identities=12% Similarity=0.121 Sum_probs=54.7
Q ss_pred cCCeeEEecCCeEEEEEEEEee-cCCceEEEeC--C---EEc-c--c----------CCcEEEEEeeCCeEEEEEccCCC
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGY-PKPKVSFYFN--D---ELI-E--M----------GGRYDSSYTRNGQATLFINKMLD 170 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~-P~P~i~W~k~--g---~~l-~--~----------~~r~~i~~~~~~~~~L~I~~~~~ 170 (202)
+... .+.+|+++.|.|.+.+. +.+.+.|++. + ..| . . ..|+.+.. ......|.|.++..
T Consensus 8 p~~~-~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~~~~ 85 (115)
T 2otu_A 8 SSSA-SFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-SGADRYLSISNIQP 85 (115)
T ss_dssp CCCE-ECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEE-ETTEEEEEESSCCG
T ss_pred CCCE-EECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEc-cCCEEEEEECCCCh
Confidence 5555 88899999999999876 5778999983 2 111 1 1 24666643 34467899999999
Q ss_pred CCCEEEEEEEEeCC
Q psy5280 171 RDVGMYEALASNEH 184 (202)
Q Consensus 171 ~D~G~Y~C~a~N~~ 184 (202)
+|+|.|.|.+.+..
T Consensus 86 ~Dsg~Y~C~~~~~~ 99 (115)
T 2otu_A 86 EDEAIYICGVGDTI 99 (115)
T ss_dssp GGCEEEEEEEEECC
T ss_pred hHCEEEEEEEecCC
Confidence 99999999998764
No 476
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.60 E-value=3.8e-08 Score=74.35 Aligned_cols=62 Identities=11% Similarity=0.019 Sum_probs=48.4
Q ss_pred EEEEEEEEeecCCceEEEeCCEEcccCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEEEEEEEe
Q psy5280 122 SSLFWFVYGYPKPKVSFYFNDELIEMGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQRVSSGN 195 (202)
Q Consensus 122 v~L~C~v~G~P~P~i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V 195 (202)
..|.|.+.|.|.|.++|++++..+....+. .|.+. ...|.|.|+|.|.|.+|..++.+.|..
T Consensus 108 ~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~----------~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l~c 169 (171)
T 1ccz_A 108 ATLTCEVLEGTDVELKLYQGKEHLRSLRQK----------TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVVNC 169 (171)
T ss_dssp TEEEEECSSCSSCEEEEEETTEEEEEESSS----------EEEEE--CSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred cEEEEEeCCCCCcEEEEEECCEECcCCcce----------EEEEe--ccCCCceEEEEEEcccCcccceeEEeC
Confidence 479999999999999999999887643322 23333 367889999999999999887776543
No 477
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.60 E-value=2.1e-07 Score=65.45 Aligned_cols=71 Identities=13% Similarity=0.080 Sum_probs=52.4
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--E---Ecc---c----------CCcEEEEEeeCCeEEEEEccCCCC
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--E---LIE---M----------GGRYDSSYTRNGQATLFINKMLDR 171 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~---~l~---~----------~~r~~i~~~~~~~~~L~I~~~~~~ 171 (202)
+... .+.+|+++.|.|.+.+.+.+.+.|++.. . .|. . ..|+.+..... . .|.|.++..+
T Consensus 8 p~~~-~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~-~-~L~I~~~~~~ 84 (112)
T 1fo0_B 8 PRWR-LVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTD-T-ELRLQVANMS 84 (112)
T ss_dssp CSEE-ECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEET-T-EEEEEEESCC
T ss_pred CCeE-EEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCC-C-eEEEcCCCHh
Confidence 4444 7889999999999977777889999842 1 121 0 14555543333 3 8999999999
Q ss_pred CCEEEEEEEEeC
Q psy5280 172 DVGMYEALASNE 183 (202)
Q Consensus 172 D~G~Y~C~a~N~ 183 (202)
|+|.|.|.+.+.
T Consensus 85 Dsg~Y~C~~~~~ 96 (112)
T 1fo0_B 85 QGRTLYCTCSAD 96 (112)
T ss_dssp SCEEEEEEEESS
T ss_pred HCEEEEEEEEcC
Confidence 999999999875
No 478
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.60 E-value=3.3e-07 Score=64.49 Aligned_cols=83 Identities=12% Similarity=0.053 Sum_probs=56.7
Q ss_pred EEecCCeEEEEEEEEee---cCCceEEEeCC-----EEcc-------------cCCcEEEEEeeC-CeEEEEEccCCCCC
Q psy5280 115 YGIKNENSSLFWFVYGY---PKPKVSFYFND-----ELIE-------------MGGRYDSSYTRN-GQATLFINKMLDRD 172 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~---P~P~i~W~k~g-----~~l~-------------~~~r~~i~~~~~-~~~~L~I~~~~~~D 172 (202)
.+.+|+++.|.|.+.+. +...+.|++.. ..|. ...|+.+..... ....|.|.++..+|
T Consensus 9 ~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~D 88 (116)
T 3bj9_1 9 SSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPED 88 (116)
T ss_dssp EEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCChhH
Confidence 88999999999999854 56789999842 1111 124565533221 23489999999999
Q ss_pred CEEEEEEEEeCCce-EEEEEEEEeec
Q psy5280 173 VGMYEALASNEHGT-ARQRVSSGNPA 197 (202)
Q Consensus 173 ~G~Y~C~a~N~~G~-~~~~~~L~V~~ 197 (202)
+|.|.|.+.+.... ......|.|..
T Consensus 89 sG~Y~C~~~~~~~~~fg~gT~L~V~~ 114 (116)
T 3bj9_1 89 EAMYYCAMGARSTHVFGSGTQLTVLS 114 (116)
T ss_dssp CEEEEEEECCSSCCEECCCEEEEEES
T ss_pred CEEEEEEEeCCCCcEECCCEEEEEec
Confidence 99999999876432 12234666654
No 479
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.60 E-value=3.5e-07 Score=77.46 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=52.8
Q ss_pred CCeEEeccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEE
Q psy5280 103 APRFLNQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMY 176 (202)
Q Consensus 103 ~P~fi~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y 176 (202)
+|.+...+... ...+|+.+.|.|.+.|.+ .+.|+|+|||..+.............+ ...|.|......|.|.|
T Consensus 274 ~P~v~v~~~~~-~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~Y 352 (376)
T 2aty_A 274 APQLYTIPPPK-EQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTF 352 (376)
T ss_pred CCeEEeeCCCH-HHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcE
Confidence 44443333333 234588999999999964 347899999998753221111111111 23577777777789999
Q ss_pred EEEEEeCCce
Q psy5280 177 EALASNEHGT 186 (202)
Q Consensus 177 ~C~a~N~~G~ 186 (202)
+|.|.|..-.
T Consensus 353 tC~v~h~~l~ 362 (376)
T 2aty_A 353 TCSVLHEGLH 362 (376)
T ss_pred EEEEEeCCCC
Confidence 9999998754
No 480
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.59 E-value=5.6e-08 Score=77.35 Aligned_cols=73 Identities=12% Similarity=0.083 Sum_probs=52.4
Q ss_pred cCCeeEEecCCeEEEEEEEEeecCCceEEEeC--CE---Ecc-c-----------CC-cEEEEEeeCCeEEEEEccCCCC
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGYPKPKVSFYFN--DE---LIE-M-----------GG-RYDSSYTRNGQATLFINKMLDR 171 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~--g~---~l~-~-----------~~-r~~i~~~~~~~~~L~I~~~~~~ 171 (202)
+... .+.+|+++.|.|.+.+.+.+.+.|+|. +. .+. . .. |+.+..... .. |.|.++..+
T Consensus 8 p~~v-~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~-~~-L~I~~v~~~ 84 (253)
T 3to4_D 8 PRWR-LVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTD-TE-LRLQVANMS 84 (253)
T ss_dssp CSEE-EEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSS-SC-CEEEEESCS
T ss_pred CCeE-EEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCC-Ce-EEEccCChh
Confidence 4444 889999999999999999999999982 11 110 0 11 555422211 22 999999999
Q ss_pred CCEEEEEEEEeCCc
Q psy5280 172 DVGMYEALASNEHG 185 (202)
Q Consensus 172 D~G~Y~C~a~N~~G 185 (202)
|+|.|.|.+.+..+
T Consensus 85 DsG~Y~C~~~~~~~ 98 (253)
T 3to4_D 85 QGRTLYCTSSADHW 98 (253)
T ss_dssp SCEEEEEEEECSCC
T ss_pred hCeEEEEEEecCCC
Confidence 99999999997654
No 481
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.59 E-value=1.1e-07 Score=77.02 Aligned_cols=73 Identities=11% Similarity=0.063 Sum_probs=54.3
Q ss_pred cCCeeEEecCCeEEEEEEEEee--cCCceEEEeCC--EEcc-----------------cCCcEEEEEe-eCCeEEEEEcc
Q psy5280 110 EHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFND--ELIE-----------------MGGRYDSSYT-RNGQATLFINK 167 (202)
Q Consensus 110 ~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~g--~~l~-----------------~~~r~~i~~~-~~~~~~L~I~~ 167 (202)
+... .+.+|+++.|.|.+.+. +.+.+.|+|.. ..+. ...|+.+... ......|.|.+
T Consensus 7 p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (280)
T 3fku_X 7 SGAE-VKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRS 85 (280)
T ss_dssp CCCC-EECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECS
T ss_pred CCCE-EECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 5555 88999999999999886 56789999742 1100 1246665322 23346899999
Q ss_pred CCCCCCEEEEEEEEeC
Q psy5280 168 MLDRDVGMYEALASNE 183 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~ 183 (202)
+..+|+|.|.|.+.|.
T Consensus 86 v~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 86 LRSEDTAVYYCARSPS 101 (280)
T ss_dssp CCSTTCEECCEEECSS
T ss_pred CChhhCEEEEEEEecC
Confidence 9999999999999997
No 482
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.59 E-value=3.7e-09 Score=81.82 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=56.2
Q ss_pred EEecCCeEEEEEEEEeecC-----CceEEEeCCEEc-------------ccCCcEEEEEe--eCCeEEEEEccCCCCCCE
Q psy5280 115 YGIKNENSSLFWFVYGYPK-----PKVSFYFNDELI-------------EMGGRYDSSYT--RNGQATLFINKMLDRDVG 174 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~-----P~i~W~k~g~~l-------------~~~~r~~i~~~--~~~~~~L~I~~~~~~D~G 174 (202)
.+.+|+++.|.|.+.+.|. +.+.|++++... ....++.+... ..+...|.|.++..+|+|
T Consensus 6 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G 85 (222)
T 4i0k_A 6 VALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEG 85 (222)
T ss_dssp CCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCS
T ss_pred EEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCE
Confidence 6779999999999998875 689999986332 11233333000 012567999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEee
Q psy5280 175 MYEALASNEHGTARQRVSSGNP 196 (202)
Q Consensus 175 ~Y~C~a~N~~G~~~~~~~L~V~ 196 (202)
.|+|.+.|. +..+..+.|.|.
T Consensus 86 ~Y~C~~~~~-~~~~~~~~l~V~ 106 (222)
T 4i0k_A 86 SYTCFVSIQ-DFDSAAVSLQVA 106 (222)
T ss_dssp CEEEEEEEC-CCCCCCCCCCCC
T ss_pred EEEEEEEeC-CCceEEEEEEEE
Confidence 999999986 344444455444
No 483
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.59 E-value=3.6e-08 Score=70.14 Aligned_cols=77 Identities=14% Similarity=0.214 Sum_probs=55.4
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeec----CCceEEEeCC----EEcc-----cCCcEEEEEe----eCCeEEEEEccC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYP----KPKVSFYFND----ELIE-----MGGRYDSSYT----RNGQATLFINKM 168 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P----~P~i~W~k~g----~~l~-----~~~r~~i~~~----~~~~~~L~I~~~ 168 (202)
.+.++... .+.+|+++.|.|.+.+.+ .+.+.|++.. +.+. ...|+.+... ......|.|.++
T Consensus 10 ~v~~p~~v-~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v 88 (120)
T 3noi_A 10 WVSQPPEI-RTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDV 88 (120)
T ss_dssp CEECCSEE-EEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSC
T ss_pred EEcCCCEE-EEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecC
Confidence 34455555 889999999999998766 4579999974 3332 1345554211 123458999999
Q ss_pred CCCCCEEEEEEEEeC
Q psy5280 169 LDRDVGMYEALASNE 183 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~ 183 (202)
..+|+|.|.|.+...
T Consensus 89 ~~~DsG~Y~C~v~~~ 103 (120)
T 3noi_A 89 RGHDASIYVCRVEVL 103 (120)
T ss_dssp CGGGCEEEEEEEEET
T ss_pred ChhhCEEEEEEEEEC
Confidence 999999999999854
No 484
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.59 E-value=9.9e-08 Score=77.36 Aligned_cols=70 Identities=11% Similarity=0.060 Sum_probs=53.7
Q ss_pred eEEecCCeEEEEEEEEe-ec-CCceEEEeC--CEEcc------------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEE
Q psy5280 114 QYGIKNENSSLFWFVYG-YP-KPKVSFYFN--DELIE------------MGGRYDSSYTRNGQATLFINKMLDRDVGMYE 177 (202)
Q Consensus 114 ~~v~~G~~v~L~C~v~G-~P-~P~i~W~k~--g~~l~------------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~ 177 (202)
..+.+|+++.|.|.+.+ .+ .+.+.|+|. +..+. ...|+.+.. ......|.|.++..+|+|.|.
T Consensus 149 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~DsG~Y~ 227 (280)
T 3fku_X 149 VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASR-SGNTASLTITGLQPEDEADYY 227 (280)
T ss_dssp EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEE-ETTEEEEEECSCCGGGCSEEE
T ss_pred EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEc-cCCEEEEEECCCCHHHCEEEE
Confidence 38899999999999998 44 478999973 22211 135666633 345678999999999999999
Q ss_pred EEEEeCC
Q psy5280 178 ALASNEH 184 (202)
Q Consensus 178 C~a~N~~ 184 (202)
|.+.|..
T Consensus 228 C~~~~~~ 234 (280)
T 3fku_X 228 CSTWDSS 234 (280)
T ss_dssp EEEEETT
T ss_pred EEEecCC
Confidence 9999986
No 485
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.59 E-value=2.4e-07 Score=74.06 Aligned_cols=68 Identities=18% Similarity=0.167 Sum_probs=45.1
Q ss_pred cCCeEEEEEEEEe-ecCC-ceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCc
Q psy5280 118 KNENSSLFWFVYG-YPKP-KVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHG 185 (202)
Q Consensus 118 ~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G 185 (202)
.|+.+.|.|.+.| +|.+ .|+|+|+|..+.............+ ...|.|......|.|.|+|.+.+..-
T Consensus 144 ~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 144 TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp GSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred cCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 4889999999999 4554 6999999998753211100001111 24566665555678999999999874
No 486
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.59 E-value=1.2e-07 Score=66.46 Aligned_cols=69 Identities=16% Similarity=0.125 Sum_probs=53.2
Q ss_pred EEecCCeEEEEEEEE-eecCCceEEEeC--CE---Ecc-----c----------CCcEEEEEeeCCeEEEEEccCCCCCC
Q psy5280 115 YGIKNENSSLFWFVY-GYPKPKVSFYFN--DE---LIE-----M----------GGRYDSSYTRNGQATLFINKMLDRDV 173 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~-G~P~P~i~W~k~--g~---~l~-----~----------~~r~~i~~~~~~~~~L~I~~~~~~D~ 173 (202)
.+.+|++|.|.|.+. +.+.+.+.|++. +. .|. . ..|+.+.. ......|.|.++..+|+
T Consensus 10 ~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~-~~~~~~L~I~~~~~~Ds 88 (111)
T 2qhl_A 10 TVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTV-NDQKFDLNIIGTREDDG 88 (111)
T ss_dssp ECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEE-SSSBEEEEESSCCGGGC
T ss_pred EEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEE-cCCeEEEEECCCChhHC
Confidence 778999999999998 877788999984 21 111 0 35666643 34456899999999999
Q ss_pred EEEEEEEEeCC
Q psy5280 174 GMYEALASNEH 184 (202)
Q Consensus 174 G~Y~C~a~N~~ 184 (202)
|.|.|.+.|..
T Consensus 89 G~Y~C~~~~~~ 99 (111)
T 2qhl_A 89 GEYFCGEVEGN 99 (111)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEccCC
Confidence 99999999863
No 487
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.58 E-value=1.5e-07 Score=74.92 Aligned_cols=76 Identities=14% Similarity=0.187 Sum_probs=54.8
Q ss_pred EEeccCCeeEEecCCeEEEEEEEEeecCCceEEEeCC--E---Ecc------------cCCcEEEEEeeCCeEEEEEccC
Q psy5280 106 FLNQEHDTQYGIKNENSSLFWFVYGYPKPKVSFYFND--E---LIE------------MGGRYDSSYTRNGQATLFINKM 168 (202)
Q Consensus 106 fi~~~~~~~~v~~G~~v~L~C~v~G~P~P~i~W~k~g--~---~l~------------~~~r~~i~~~~~~~~~L~I~~~ 168 (202)
++..+... .+.+|+++.|.|.+. .+.+.+.|+|+. . .+. ...|+.+.........|.|.++
T Consensus 6 v~q~p~~v-~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 83 (252)
T 1oga_E 6 ITQSPKYL-FRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSA 83 (252)
T ss_dssp EECSCSEE-EEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSC
T ss_pred ceEcCCeE-EEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcC
Confidence 34445555 889999999999985 467899999852 1 110 1346665221223468999999
Q ss_pred CCCCCEEEEEEEEeC
Q psy5280 169 LDRDVGMYEALASNE 183 (202)
Q Consensus 169 ~~~D~G~Y~C~a~N~ 183 (202)
..+|+|.|.|.+.|.
T Consensus 84 ~~~D~G~Y~C~~~~~ 98 (252)
T 1oga_E 84 QKNPTAFYLCASSSR 98 (252)
T ss_dssp CSCCCEEEEEEEESS
T ss_pred ChhhCEEEEEEEecC
Confidence 999999999999996
No 488
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.58 E-value=8.1e-08 Score=82.68 Aligned_cols=78 Identities=10% Similarity=0.056 Sum_probs=54.9
Q ss_pred EEecCCeEEEEEEEEee-cC-CceEEEeCCEEcccCCcEEEEEeeCC----eEEEEEccCCCCCCEEEEEEEEeCCceEE
Q psy5280 115 YGIKNENSSLFWFVYGY-PK-PKVSFYFNDELIEMGGRYDSSYTRNG----QATLFINKMLDRDVGMYEALASNEHGTAR 188 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~-P~-P~i~W~k~g~~l~~~~r~~i~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~ 188 (202)
.+.+|+.+.|.|.+.|. |. |.|.|+|++..+.......+ ....+ ...|.|..+...| |.|+|.|.|..|...
T Consensus 143 ~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~-~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 220 (457)
T 1hzh_H 143 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 220 (457)
T ss_dssp CCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEE-ECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEE
T ss_pred cccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCce-ECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcc
Confidence 35789999999999998 65 78999999965431100000 00011 2479999999999 999999999988765
Q ss_pred EEEEEE
Q psy5280 189 QRVSSG 194 (202)
Q Consensus 189 ~~~~L~ 194 (202)
....+.
T Consensus 221 ~~~~v~ 226 (457)
T 1hzh_H 221 VDKKAE 226 (457)
T ss_dssp EEEECC
T ss_pred eeEEec
Confidence 554433
No 489
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.58 E-value=1.9e-08 Score=83.36 Aligned_cols=79 Identities=11% Similarity=0.087 Sum_probs=59.9
Q ss_pred CeeEEecCCeEEEEEEEEeec-CCceEEEeCCEEcccC-CcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 112 DTQYGIKNENSSLFWFVYGYP-KPKVSFYFNDELIEMG-GRYDSSYTRNGQATLFINKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 112 ~~~~v~~G~~v~L~C~v~G~P-~P~i~W~k~g~~l~~~-~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
..+.+..|+++.|.|.+.|.+ .|.|.|.+++..+... .++.. ..+.|.|.++...|+|.|+|. ..|...+
T Consensus 14 ~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~---~~g~~~~ 85 (325)
T 1n26_A 14 GVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAG-----MGRRLLLRSVQLHDSGNYSCY---RAGRPAG 85 (325)
T ss_dssp TEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEE-----ESSEEEECSCCGGGCEEEEEE---SSSSCSC
T ss_pred CcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcccccccc-----ccceEEecccchhhCeEeEEE---eCCEEee
Confidence 333567999999999998765 7899999988765321 12222 246899999999999999999 3777778
Q ss_pred EEEEEeecC
Q psy5280 190 RVSSGNPAQ 198 (202)
Q Consensus 190 ~~~L~V~~~ 198 (202)
.+.|.|..+
T Consensus 86 ~~~L~V~~p 94 (325)
T 1n26_A 86 TVHLLVDVP 94 (325)
T ss_dssp EEEEEECCC
T ss_pred eEEEEeccC
Confidence 888888754
No 490
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.57 E-value=7.8e-07 Score=78.23 Aligned_cols=80 Identities=15% Similarity=0.154 Sum_probs=53.3
Q ss_pred cCCeEE-EEEEEEeecCC--ceEEEeCCEEcccCCcEE--EEEeeCCe-----EEEEEccCCCCCCEEEEEEEEeCCceE
Q psy5280 118 KNENSS-LFWFVYGYPKP--KVSFYFNDELIEMGGRYD--SSYTRNGQ-----ATLFINKMLDRDVGMYEALASNEHGTA 187 (202)
Q Consensus 118 ~G~~v~-L~C~v~G~P~P--~i~W~k~g~~l~~~~r~~--i~~~~~~~-----~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 187 (202)
.|+.+. |.|.+.|.+++ .|.|+|||..+....... ......+. ..|.|......|.|.|+|.|.|.....
T Consensus 414 ~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~ 493 (512)
T 1zvo_C 414 PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRT 493 (512)
T ss_pred CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCC
Confidence 588899 99999997655 478999999986542211 11111111 356677667777999999999987653
Q ss_pred --EEEEEEEeec
Q psy5280 188 --RQRVSSGNPA 197 (202)
Q Consensus 188 --~~~~~L~V~~ 197 (202)
.....|.|..
T Consensus 494 ~~~~~~~~~v~~ 505 (512)
T 1zvo_C 494 LLNASRSLEVSY 505 (512)
T ss_pred ceEEEEEEEecc
Confidence 3444555543
No 491
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.57 E-value=2.4e-07 Score=73.83 Aligned_cols=88 Identities=15% Similarity=0.109 Sum_probs=60.1
Q ss_pred eccCCeeEEecCCeEEEEEEEEee--cCCceEEEeCC-----EEc--------------ccCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFND-----ELI--------------EMGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~g-----~~l--------------~~~~r~~i~~~~-~~~~~L~I 165 (202)
.++... .+.+|+++.|.|.+.|. +.+.+.|+|.. ..+ ....|+.+.... .....|.|
T Consensus 5 ~~p~~v-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 83 (253)
T 3liz_H 5 VESGGG-LVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQM 83 (253)
T ss_dssp EEECCC-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEE
T ss_pred EcCCCE-EECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEE
Confidence 344455 88999999999999873 46789999842 111 012466663322 24567999
Q ss_pred ccCCCCCCEEEEEEEEeC----CceEEEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNE----HGTARQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~----~G~~~~~~~L~V~ 196 (202)
.++..+|+|.|.|.+.|. .+.....+.|.|.
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~ 118 (253)
T 3liz_H 84 SSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVS 118 (253)
T ss_dssp CSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEEC
T ss_pred CCCChhhCEEEEEEEecCCcceeeEECCCEEEEEe
Confidence 999999999999999986 2333333455554
No 492
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.56 E-value=3.3e-08 Score=76.51 Aligned_cols=77 Identities=6% Similarity=-0.044 Sum_probs=45.9
Q ss_pred EEecCCeEEEEEEEEeecCCc--eEEEeCCEEcccCCcEEEEEeeCCeEEEEE---ccCCCCCCEEEEEEEEeCCceEEE
Q psy5280 115 YGIKNENSSLFWFVYGYPKPK--VSFYFNDELIEMGGRYDSSYTRNGQATLFI---NKMLDRDVGMYEALASNEHGTARQ 189 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P~--i~W~k~g~~l~~~~r~~i~~~~~~~~~L~I---~~~~~~D~G~Y~C~a~N~~G~~~~ 189 (202)
.+.+|+.+.|.|.+.|.+++. +.|++++..+........ . ...+.+.+ ..+...| |.|+|.|.|..|....
T Consensus 131 ~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~-~--~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~ 206 (215)
T 3nl4_H 131 GDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSV-R--QSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKV 206 (215)
T ss_dssp TCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCE-E--CTTSCEEEEEEEEECC----CCEEEEEEGGGTEEE
T ss_pred cccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCce-E--CCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcce
Confidence 345799999999999986544 669999875532111111 0 11122222 3455667 9999999999998877
Q ss_pred EEEEEe
Q psy5280 190 RVSSGN 195 (202)
Q Consensus 190 ~~~L~V 195 (202)
.+.|.+
T Consensus 207 ~~~l~~ 212 (215)
T 3nl4_H 207 DKTVAP 212 (215)
T ss_dssp EEECCS
T ss_pred EEecCC
Confidence 766654
No 493
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.54 E-value=2.8e-08 Score=71.14 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=58.7
Q ss_pred EEecCCeEEEEEEE-EeecCCceEEEeCCE-Eccc-------------CCcEEEEEeeCCeEEEEEccCCCCCCEEEEEE
Q psy5280 115 YGIKNENSSLFWFV-YGYPKPKVSFYFNDE-LIEM-------------GGRYDSSYTRNGQATLFINKMLDRDVGMYEAL 179 (202)
Q Consensus 115 ~v~~G~~v~L~C~v-~G~P~P~i~W~k~g~-~l~~-------------~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~ 179 (202)
.+.+|++|.|.|.. .......+.|+++.. .+.. ..|+.+ ...++.|.|.++..+|+|.|.|.
T Consensus 15 ~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l---~~~~~sL~I~nv~~~DsG~Y~c~ 91 (121)
T 2edo_A 15 TVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRL---DPQSGALYISKVQKEDNSTYIMR 91 (121)
T ss_dssp EEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEE---CTTTCCEEESSCCGGGCSEEEEE
T ss_pred EEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEE---eCCCceEEEeCCCHHHCeEEEEE
Confidence 78899999999976 333445799998752 2210 234444 12457899999999999999999
Q ss_pred EEeCCc-eEEEEEEEEeecC
Q psy5280 180 ASNEHG-TARQRVSSGNPAQ 198 (202)
Q Consensus 180 a~N~~G-~~~~~~~L~V~~~ 198 (202)
+.|..+ .....+.|.|.++
T Consensus 92 v~~~~~~~~~~~~~L~V~~~ 111 (121)
T 2edo_A 92 VLKKTGNEQEWKIKLQVLDP 111 (121)
T ss_dssp EEETTTEEEECCEECEEECC
T ss_pred EEcCCCcEEEEEEEEEEECC
Confidence 998765 4556678888765
No 494
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.54 E-value=3.4e-07 Score=79.33 Aligned_cols=88 Identities=11% Similarity=0.058 Sum_probs=61.9
Q ss_pred eccCCeeEEecCCeEEEEEEEEeec--CCceEEEeCC--EE---cc--------------cCCcEEEEEee-CCeEEEEE
Q psy5280 108 NQEHDTQYGIKNENSSLFWFVYGYP--KPKVSFYFND--EL---IE--------------MGGRYDSSYTR-NGQATLFI 165 (202)
Q Consensus 108 ~~~~~~~~v~~G~~v~L~C~v~G~P--~P~i~W~k~g--~~---l~--------------~~~r~~i~~~~-~~~~~L~I 165 (202)
..+... .+.+|+++.|.|.+.|.+ .+.+.|+|+. .. +. ...|+.+.... .....|.|
T Consensus 6 ~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (475)
T 1iga_A 6 EQSGAE-VKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGL 84 (475)
T ss_pred ccCCcE-EEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEE
Confidence 344555 889999999999999875 5789999852 21 10 13456553221 23468999
Q ss_pred ccCCCCCCEEEEEEEEeCCce------EEEEEEEEee
Q psy5280 166 NKMLDRDVGMYEALASNEHGT------ARQRVSSGNP 196 (202)
Q Consensus 166 ~~~~~~D~G~Y~C~a~N~~G~------~~~~~~L~V~ 196 (202)
.++..+|+|.|.|.+.|..|. ....+.|.|.
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~ 121 (475)
T 1iga_A 85 SSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVS 121 (475)
T ss_pred CCCChhhCEEEEEEEeccCCCccceeeecCceEEEec
Confidence 999999999999999998762 2234566665
No 495
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.54 E-value=9.7e-08 Score=68.80 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=59.3
Q ss_pred ccCCeeEEecCCeEEEEEEEEee---cCCceEEEeCC-----EEcc-------------cCCcEEEEEe-eCCeEEEEEc
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGY---PKPKVSFYFND-----ELIE-------------MGGRYDSSYT-RNGQATLFIN 166 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~---P~P~i~W~k~g-----~~l~-------------~~~r~~i~~~-~~~~~~L~I~ 166 (202)
++... .+.+|++|.|.|.+.+. ....+.|++.. ..|. ...|+.+... ......|.|.
T Consensus 6 qp~~v-~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~ 84 (126)
T 2h32_A 6 QPPAM-SSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSIS 84 (126)
T ss_dssp CCSEE-EEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEEC
T ss_pred CCCCE-EECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEEC
Confidence 34444 88999999999999874 34679999742 1111 0246666432 2345689999
Q ss_pred cCCCCCCEEEEEEEEeCCceEEEEEEEEe
Q psy5280 167 KMLDRDVGMYEALASNEHGTARQRVSSGN 195 (202)
Q Consensus 167 ~~~~~D~G~Y~C~a~N~~G~~~~~~~L~V 195 (202)
++..+|+|.|.|.+.+..+.......|.|
T Consensus 85 ~~~~~DsG~Y~C~~~~~~~~~~~~t~l~v 113 (126)
T 2h32_A 85 ELQPEDEAMYYCAMGARSSEKEEREREWE 113 (126)
T ss_dssp SCCGGGCEEEEEEEECSCCCCCCTTCC--
T ss_pred CCChhHCEEEEEEEEcCCCCcceeEEEee
Confidence 99999999999999988876654444444
No 496
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.54 E-value=9.5e-08 Score=76.01 Aligned_cols=68 Identities=13% Similarity=0.248 Sum_probs=46.9
Q ss_pred cCCeEEEEEEEEe-ecCC-ceEEEeCCEEcccCCcEEEEE-e-----eCC----eEEEEEccCCCCC-CEEEEEEEEeCC
Q psy5280 118 KNENSSLFWFVYG-YPKP-KVSFYFNDELIEMGGRYDSSY-T-----RNG----QATLFINKMLDRD-VGMYEALASNEH 184 (202)
Q Consensus 118 ~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~~~~r~~i~~-~-----~~~----~~~L~I~~~~~~D-~G~Y~C~a~N~~ 184 (202)
.|+.+.|.|.+.| .|.| .++|+|+|..+.......... . ..+ ...|.|......| .|.|+|.+.|..
T Consensus 138 ~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 138 HTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred cCCceEEEEEEceEECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 4689999999999 6667 799999999886532111000 0 011 2467777777677 779999999975
Q ss_pred c
Q psy5280 185 G 185 (202)
Q Consensus 185 G 185 (202)
-
T Consensus 218 l 218 (253)
T 3to4_D 218 L 218 (253)
T ss_dssp B
T ss_pred C
Confidence 3
No 497
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.53 E-value=4.3e-07 Score=66.32 Aligned_cols=88 Identities=14% Similarity=-0.004 Sum_probs=60.6
Q ss_pred ccCCeeEEecCCeEEEEEEEEeec---CCceEEEeCC-----EEcc---------cCCcEEEEEeeCCeEEEEEccCCCC
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGYP---KPKVSFYFND-----ELIE---------MGGRYDSSYTRNGQATLFINKMLDR 171 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~P---~P~i~W~k~g-----~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~ 171 (202)
++... .+.+|++|.|.|.+.+.+ .+.+.|++.. +.|. ...|+.+.. ......|.|.++..+
T Consensus 11 q~~~v-~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~-~~~~~sL~I~~v~~~ 88 (135)
T 1p4b_L 11 QESAL-TTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-IGDKAALTITGAQTE 88 (135)
T ss_dssp CCSEE-EECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEEESCCGG
T ss_pred ECCcE-EEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEc-CCCEEEEEECCCChh
Confidence 34443 889999999999998765 5689999852 1111 135676643 344678999999999
Q ss_pred CCEEEEEEEEeCCceE-EEEEEEEeecC
Q psy5280 172 DVGMYEALASNEHGTA-RQRVSSGNPAQ 198 (202)
Q Consensus 172 D~G~Y~C~a~N~~G~~-~~~~~L~V~~~ 198 (202)
|+|.|.|.+.+..... .....|.|...
T Consensus 89 DsG~Y~C~~~~~~~~~fg~GT~L~V~~~ 116 (135)
T 1p4b_L 89 DEAIYFCALWYSNHWVFGGGTKLTVLGG 116 (135)
T ss_dssp GCEEEEEEEECSSCEEECCCEEEEEC--
T ss_pred HCEEEEEEEecCCCCEECCCEEEEEEcC
Confidence 9999999998764311 12356777654
No 498
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.52 E-value=1.8e-07 Score=73.33 Aligned_cols=75 Identities=11% Similarity=0.036 Sum_probs=52.2
Q ss_pred EEecCCeEEEEEEEEeecCC--ceEEEeCCEEcc---------cCCcEEEEEeeCCeEEEEEccCCCCCCEEEEEEEEeC
Q psy5280 115 YGIKNENSSLFWFVYGYPKP--KVSFYFNDELIE---------MGGRYDSSYTRNGQATLFINKMLDRDVGMYEALASNE 183 (202)
Q Consensus 115 ~v~~G~~v~L~C~v~G~P~P--~i~W~k~g~~l~---------~~~r~~i~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~ 183 (202)
.+..|+.+.|.|.+.|.+++ .+.|++++..+. ....+.+ ...|.|......| |.|+|.|.|.
T Consensus 143 ~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~------~s~L~i~~~~~~~-g~ytC~v~~~ 215 (232)
T 3qhz_H 143 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL------SSVVTVPSSSLGT-QTYICNVNHK 215 (232)
T ss_dssp -----CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE------EEEEEEEGGGGGT-CCCEEEEEEG
T ss_pred cccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEE------EEEEEEchhhcCC-CEEEEEEEeC
Confidence 45679999999999997654 467999986432 1222322 3568888888888 9999999999
Q ss_pred CceEEEEEEEEee
Q psy5280 184 HGTARQRVSSGNP 196 (202)
Q Consensus 184 ~G~~~~~~~L~V~ 196 (202)
.+.......|.+.
T Consensus 216 ~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 216 PSNTKVDKRVEPK 228 (232)
T ss_dssp GGTEEEEEECCCC
T ss_pred CCCccEEEEeCCC
Confidence 9888777766553
No 499
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.52 E-value=7e-08 Score=77.34 Aligned_cols=64 Identities=16% Similarity=0.298 Sum_probs=49.3
Q ss_pred ecCCeEEEEEEEEe-ecCC-ceEEEeCCEEcccCC----------------cEEEEEeeCCeEEEEEccCCCCC-CEEEE
Q psy5280 117 IKNENSSLFWFVYG-YPKP-KVSFYFNDELIEMGG----------------RYDSSYTRNGQATLFINKMLDRD-VGMYE 177 (202)
Q Consensus 117 ~~G~~v~L~C~v~G-~P~P-~i~W~k~g~~l~~~~----------------r~~i~~~~~~~~~L~I~~~~~~D-~G~Y~ 177 (202)
..|+.+.|.|.+.| .|.| .++|+|+|..+.... .+.+ ...|.|......| .|.|+
T Consensus 162 ~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~d~~g~Yt 235 (270)
T 3qib_D 162 SHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYAL------SSRLRVSATFWQNPRNHFR 235 (270)
T ss_dssp HHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEE------EEEEEEEHHHHHSTTCEEE
T ss_pred ccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEE------EEEEEEcHHHhccCCCeEE
Confidence 34899999999999 6667 799999999886532 1222 2457788777777 99999
Q ss_pred EEEEeCCce
Q psy5280 178 ALASNEHGT 186 (202)
Q Consensus 178 C~a~N~~G~ 186 (202)
|.|.|....
T Consensus 236 C~v~~~~l~ 244 (270)
T 3qib_D 236 CQVQFYGLS 244 (270)
T ss_dssp EEEEECCBC
T ss_pred EEEEecCCC
Confidence 999998764
No 500
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.52 E-value=3.9e-07 Score=71.62 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=54.6
Q ss_pred ccCCeeEEecCCeEEEEEEEEee--cCCceEEEeCC--E---Ecc-------------cCCcEEEEEeeC-CeEEEEEcc
Q psy5280 109 QEHDTQYGIKNENSSLFWFVYGY--PKPKVSFYFND--E---LIE-------------MGGRYDSSYTRN-GQATLFINK 167 (202)
Q Consensus 109 ~~~~~~~v~~G~~v~L~C~v~G~--P~P~i~W~k~g--~---~l~-------------~~~r~~i~~~~~-~~~~L~I~~ 167 (202)
.+... .+.+|+++.|.|.+.+. +.+.+.|+|.. . .+. ...|+.+..... ....|.|.+
T Consensus 7 ~p~~v-~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (230)
T 1ypz_F 7 PEISI-SRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYS 85 (230)
T ss_dssp SCSEE-EEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECS
T ss_pred cCCEE-EEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECc
Confidence 34444 88999999999999885 67889999842 1 110 235666533211 456899999
Q ss_pred CCCCCCEEEEEEEEeC
Q psy5280 168 MLDRDVGMYEALASNE 183 (202)
Q Consensus 168 ~~~~D~G~Y~C~a~N~ 183 (202)
+..+|+|.|.|.+.|.
T Consensus 86 v~~~D~G~Y~C~~~~~ 101 (230)
T 1ypz_F 86 LEEEDEAIYYCSYGEG 101 (230)
T ss_dssp CCGGGCSEEEEEECCT
T ss_pred CChhhCEEEEEEEECC
Confidence 9999999999999985
Done!