BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5288
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q23983|SNAP_DROME Soluble NSF attachment protein OS=Drosophila melanogaster GN=Snap
PE=1 SV=1
Length = 292
Score = 206 bits (525), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/187 (51%), Positives = 136/187 (72%), Gaps = 2/187 (1%)
Query: 1 MADNEQKARQLVAEAEKKISSSSKGFF-SQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDG 59
M DNEQKA QL+AEAEKK++ KGF S F G NK ++AI+ Y RAGN+FK+ K W
Sbjct: 1 MGDNEQKALQLMAEAEKKLTQQ-KGFLGSLFGGSNKVEDAIECYQRAGNMFKMSKNWTKA 59
Query: 60 GNAFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVA 119
G F +A TLH + ++HDAG C+VDA+NCYKK + A+ + ++++I+TDMGRF M A
Sbjct: 60 GECFCEAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYTDMGRFTMAA 119
Query: 120 KHHENIAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKA 179
KHH++IAE+YE + + K+I HY+ AAD + GEE+ SSANKC++K+A Y+A + +KA
Sbjct: 120 KHHQSIAEMYESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYAAQLEDYEKA 179
Query: 180 IKLYEQL 186
I +YEQ+
Sbjct: 180 ISIYEQV 186
>sp|P54920|SNAA_HUMAN Alpha-soluble NSF attachment protein OS=Homo sapiens GN=NAPA PE=1
SV=3
Length = 295
Score = 200 bits (509), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 123/170 (72%)
Query: 17 KKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNK 76
+K+ +S F F G +K +EA ++Y RA N+FK+ K W+ GNAF QA LHL+ +K
Sbjct: 19 RKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSK 78
Query: 77 HDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELEDQ 136
HDA CFVDA N +KK++P EAI + RA+EI+TDMGRF + AKHH +IAEIYE EL D
Sbjct: 79 HDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDI 138
Query: 137 EKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYEQL 186
EKAI HY+ +AD Y GEE+ SSANKCL+K+A Y+AL + KAI +YEQ+
Sbjct: 139 EKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAALLEQYQKAIDIYEQV 188
>sp|P28663|SNAB_MOUSE Beta-soluble NSF attachment protein OS=Mus musculus GN=Napb PE=1
SV=2
Length = 298
Score = 199 bits (506), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 130/185 (70%)
Query: 2 ADNEQKARQLVAEAEKKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGN 61
A E++A QL+AEAEK++ +S F G + +EA ++Y RA N+FK+ K W+ GN
Sbjct: 4 AGKEREAVQLMAEAEKRVKASHSFLRGLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGN 63
Query: 62 AFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKH 121
AF QA LH++ +KHD+ FVDA N YKK++P EAI + A++I+TDMGRF + AKH
Sbjct: 64 AFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKH 123
Query: 122 HENIAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIK 181
H IAEIYE EL D EKAI HY+ +AD Y GEE+ SSANKCL+K+A Y+A + KAI+
Sbjct: 124 HITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIE 183
Query: 182 LYEQL 186
+YEQ+
Sbjct: 184 IYEQV 188
>sp|Q9H115|SNAB_HUMAN Beta-soluble NSF attachment protein OS=Homo sapiens GN=NAPB PE=1
SV=2
Length = 298
Score = 199 bits (506), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 130/185 (70%)
Query: 2 ADNEQKARQLVAEAEKKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGN 61
A E++A QL+AEAEK++ +S F G + +EA ++Y RA N+FK+ K W+ GN
Sbjct: 4 AGKEREAVQLMAEAEKRVKASHSFLRGLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGN 63
Query: 62 AFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKH 121
AF QA LH++ +KHD+ FVDA N YKK++P EAI + A++I+TDMGRF + AKH
Sbjct: 64 AFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKH 123
Query: 122 HENIAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIK 181
H IAEIYE EL D EKAI HY+ +AD Y GEE+ SSANKCL+K+A Y+A + KAI+
Sbjct: 124 HITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIE 183
Query: 182 LYEQL 186
+YEQ+
Sbjct: 184 IYEQV 188
>sp|P54921|SNAA_RAT Alpha-soluble NSF attachment protein OS=Rattus norvegicus GN=Napa
PE=1 SV=2
Length = 295
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 122/170 (71%)
Query: 17 KKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNK 76
+K+ +S F F G +K +EA ++Y RA N+FK+ K W+ GNAF QA LHL+ +K
Sbjct: 19 RKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSK 78
Query: 77 HDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELEDQ 136
HDA CFVDA N +KK++P EAI + RA+EI+TDMGRF + AKHH +IAEIYE EL D
Sbjct: 79 HDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDV 138
Query: 137 EKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYEQL 186
EKAI HY+ +AD Y GEE+ SSANKCL+K+A Y+A + KAI +YEQ+
Sbjct: 139 EKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQV 188
>sp|P81126|SNAB_BOVIN Beta-soluble NSF attachment protein OS=Bos taurus GN=NAPB PE=1 SV=1
Length = 298
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 130/185 (70%)
Query: 2 ADNEQKARQLVAEAEKKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGN 61
A E++A QL+AEAEK++ +S F G + +EA ++Y RA N+FK+ K W+ GN
Sbjct: 4 AGKEREAVQLMAEAEKRVKASHSFLRGLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGN 63
Query: 62 AFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKH 121
AF QA LH++ +KHD+ FVDA N YKK++P EAI + A++I+TDMGRF + AKH
Sbjct: 64 AFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKH 123
Query: 122 HENIAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIK 181
H IAEIYE EL D EKAI HY+ +AD Y GEE+ SSANKCL+K+A Y+A + KAI+
Sbjct: 124 HITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIE 183
Query: 182 LYEQL 186
++EQ+
Sbjct: 184 IFEQI 188
>sp|Q9DB05|SNAA_MOUSE Alpha-soluble NSF attachment protein OS=Mus musculus GN=Napa PE=1
SV=1
Length = 295
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 122/170 (71%)
Query: 17 KKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNK 76
+K+ +S F F G +K +EA ++Y RA N+FK+ K W+ GNAF QA LHL+ +K
Sbjct: 19 RKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSK 78
Query: 77 HDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELEDQ 136
HDA CFVDA N +KK++P EAI + RA+EI+TDMGRF + AKHH +IAEIYE EL D
Sbjct: 79 HDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDV 138
Query: 137 EKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYEQL 186
EKAI HY+ +AD Y GEE+ SSANKCL+K+A Y+A + KAI +YEQ+
Sbjct: 139 EKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQV 188
>sp|P81125|SNAA_BOVIN Alpha-soluble NSF attachment protein OS=Bos taurus GN=NAPA PE=1
SV=1
Length = 295
Score = 194 bits (492), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 122/170 (71%)
Query: 17 KKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNK 76
+K+ +S F F G +K +EA ++Y RA N+FK+ K W+ G+AF QA +HL+ +K
Sbjct: 19 RKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGSAFCQAAHVHLQLQSK 78
Query: 77 HDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELEDQ 136
HDA CFVDA N +KK++P EAI + RA+EI+TDMGRF + AKHH +IAEIYE EL D
Sbjct: 79 HDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDI 138
Query: 137 EKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYEQL 186
EKAI HY+ +AD Y GEE+ SSANKCL+K+A Y+A + KAI +YEQ+
Sbjct: 139 EKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQV 188
>sp|P85969|SNAB_RAT Beta-soluble NSF attachment protein OS=Rattus norvegicus GN=Napb
PE=1 SV=1
Length = 297
Score = 193 bits (491), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 130/185 (70%), Gaps = 1/185 (0%)
Query: 2 ADNEQKARQLVAEAEKKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGN 61
A E++A QL+AEAEK++ +S F G + +EA ++Y RA N+FK+ K W+ GN
Sbjct: 4 AGKEREAVQLMAEAEKRVKASHSFLRGLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGN 63
Query: 62 AFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKH 121
AF QA LH++ +KHD+ FVDA N YKK++P EAI + A++I+TDMGRF + AKH
Sbjct: 64 AFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKH 123
Query: 122 HENIAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIK 181
H IAEIYE EL D EKAI HY+ +AD Y GEE+ +SANKCL+K+A Y+A + KAI+
Sbjct: 124 HITIAEIYETELVDIEKAIAHYEQSADYYKGEES-NSANKCLLKVAAYAAQLEQYQKAIE 182
Query: 182 LYEQL 186
+YEQ+
Sbjct: 183 IYEQV 187
>sp|Q54NP6|SNAA_DICDI Alpha-soluble NSF attachment protein OS=Dictyostelium discoideum
GN=snpA PE=1 SV=1
Length = 291
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 121/184 (65%), Gaps = 4/184 (2%)
Query: 4 NEQKARQLVAEAEKKISSSSKGFFSQFTGGN-KTDEAIDLYVRAGNLFKLGKKWNDGGNA 62
++ KA++ + A+K++ + FF F GG+ + D+A Y +A NLFK+ KKW+ G A
Sbjct: 3 DDAKAKEFLDAADKRLRGGN--FFKMFGGGSSRYDDAASDYTKAANLFKMSKKWDQAGAA 60
Query: 63 FLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHH 122
F +A LK ++KHDA +V AA CYKK N +AI ++ A+E +TD GRF + AKH
Sbjct: 61 FQKAAECFLKGSSKHDAASSYVLAAGCYKKGNVIDAITCLKAAIEYYTDEGRFAISAKHQ 120
Query: 123 ENIAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKL 182
+ IAE+YE E D ++AI YQ A+D + GE + S+++CL+KIA +SA + +K+I++
Sbjct: 121 KEIAELYEAE-GDFDQAIASYQIASDYFDGENSTVSSHQCLLKIALFSAQLERYEKSIEI 179
Query: 183 YEQL 186
YEQ+
Sbjct: 180 YEQV 183
>sp|P93798|SNAA_VITVI Alpha-soluble NSF attachment protein OS=Vitis vinifera PE=2 SV=1
Length = 289
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 117/186 (62%), Gaps = 8/186 (4%)
Query: 1 MADNEQKARQLVAEAEKKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGG 60
MADN Q+ + +AEKKIS G F G+K ++A D Y +A N FKL K W+ G
Sbjct: 1 MADNIQRGEEFEKKAEKKISGW--GLF-----GSKYEDAADFYDKAANCFKLAKSWDRAG 53
Query: 61 NAFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAK 120
+ +++ T+ +++KH+A + DA +CYKK++ EAI +E+A + D GRF M K
Sbjct: 54 STYVKLSTVIQSSDSKHEAAQAYADAGHCYKKTSAKEAISCLEQAAYLFLDNGRFNMAGK 113
Query: 121 HHENIAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAI 180
+++ IAE+YE E ++ E+AI +++ AAD Y EE ++AN+C K+A ++A + KAI
Sbjct: 114 YYKEIAELYELE-QNFEQAIIYFEKAADIYQSEEATTAANQCNAKVAQFAAQLEQYQKAI 172
Query: 181 KLYEQL 186
++YE +
Sbjct: 173 QIYEDI 178
>sp|Q9SPE6|SNAA2_ARATH Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana
GN=ASNAP2 PE=1 SV=1
Length = 289
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Query: 33 GNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNKHDAGLCFVDAANCYKK 92
G+K ++A DL +A N +KL K W+ G A+L+ HLK+++KHDA + +AA CYKK
Sbjct: 26 GSKYEDAADLLEKAANSYKLAKSWDQAGKAYLKLADCHLKSDSKHDAANAYAEAAKCYKK 85
Query: 93 SNPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELEDQEKAIDHYQHAADCYAG 152
+ EA +ERAV I ++GR M A++++ IAE YE + + E+AI +++ AA+ +
Sbjct: 86 VDTNEAASCLERAVNIFCEIGRLNMAARYYKEIAEYYESD-QKFEQAIAYFEKAAEFFQN 144
Query: 153 EENKSSANKCLIKIANYSALTDHLDKAIKLYEQL 186
EE +SAN+C +K+A Y+A + +KAIK+YE +
Sbjct: 145 EEVTTSANQCNLKVAQYAAQLEQYEKAIKIYEDI 178
>sp|O90758|V033_FOWPN Soluble NSF attachment protein homolog FPV033 OS=Fowlpox virus
(strain NVSL) GN=SNAP PE=3 SV=1
Length = 287
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
Query: 5 EQKARQLVAEAEKKISSSSKGFFSQFTGG-NKTDEAIDLYVRAGNLFKLGKKWNDGGNAF 63
EQ+A +L++EA +++ F +F N E +L +R+ LFK K W G +F
Sbjct: 2 EQEAYRLISEANRRLKDVGFLFSWKFLRNVNNVKEVGNLLIRSAILFKAVKNWELAGYSF 61
Query: 64 LQAGTLHLKNNN-KHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHH 122
L+A L + ++ D + FV+A+N Y+K +P ++I+ + +A+E++ + F AKH
Sbjct: 62 LKAAVLQSQESDFVLDTAINFVNASNMYRKIDPKKSIECLLQAIEVYKSINNFTTAAKHQ 121
Query: 123 ENIAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKL 182
+AEIYE + D EKA HY++A + Y E + SAN C+IK+A+ DKA +
Sbjct: 122 MTVAEIYESCIMDLEKACMHYEYATEYYREEGSIKSANDCMIKVADCFTRMKQFDKAASV 181
Query: 183 YEQL 186
YEQ+
Sbjct: 182 YEQI 185
>sp|Q75D68|SEC17_ASHGO Vesicular-fusion protein SEC17 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC17
PE=3 SV=1
Length = 291
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
Query: 7 KARQLVAEAEKKISSSSKGFFSQFTGGN--KTDEAIDLYVRAGNLFKLGKKWNDGGNAFL 64
+A+ L+A AEKK +S G TGG+ + +EA DLYV A NL++L K+ + G+ F
Sbjct: 3 EAKDLIARAEKKAQPAS-GLMKWLTGGDSYRLEEASDLYVEAANLYRLSKELSAAGDTFW 61
Query: 65 QAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHEN 124
+A ++ N+ +AG FV+A CYK +NP A +A+ERA+ I T G+F A
Sbjct: 62 KAAECQVEAGNEDEAGNTFVEAYKCYKGANPERACEALERAIAIFTRKGQFRRGAYFKFE 121
Query: 125 IAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYE 184
+AE+ E +L+D +A ++Y+ A D Y ++ + +NK IK A+ +AL + A +LY
Sbjct: 122 LAEVQETDLQDYGRARENYELAGDWYMQDQALALSNKAYIKCADLNALDEKYLAAAELYR 181
Query: 185 QL 186
++
Sbjct: 182 KI 183
>sp|Q9P4X4|SEC17_SCHPO Probable vesicular-fusion protein sec17 homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sec17 PE=1 SV=1
Length = 289
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Query: 10 QLVAEAEKKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTL 69
QL+ +A KK + G F+ F GGNK DEA +L++ A N ++L K+ + G AF +A +
Sbjct: 7 QLMQKAAKKAQGT--GGFALFGGGNKYDEASELFLDAANGYRLQKQGSAAGYAFEKAAEM 64
Query: 70 HLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIY 129
LK ++K DA +V+A Y++ P+EA + ++ A+E+ T G F A + ++ +I+
Sbjct: 65 QLKTDDKDDAASTYVEAFKSYRREKPSEAARVLQIAIELFTRRGNFRRAANYKMDLGDIF 124
Query: 130 EKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYEQL 186
E+EL+D + A+ Y+ A + Y+ ++ + ANK +K A+ + L AI+ +EQ+
Sbjct: 125 EQELQDTKAALGAYEDAGEWYSSDQADALANKAYLKAADLAGLCGEYSLAIRKFEQV 181
>sp|Q9J5J0|V011_FOWPN Soluble NSF attachment protein homolog FPV011 OS=Fowlpox virus
(strain NVSL) GN=FPV011 PE=3 SV=1
Length = 278
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 17 KKISSSSKGFFSQFTGGN-KTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHL-KNN 74
+KI FF G + +EA + A NLF + W G AF ++G + L KN
Sbjct: 2 QKIKLKVSPFFKNLFGPPIEIEEAAGMVSHAANLFASVQLWECAGKAFFKSGDMLLQKNK 61
Query: 75 NKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELE 134
N A FVDAAN +KK + EAI + +A+E++T +G+F VA+ H NIA IYE ++
Sbjct: 62 NSIAAASSFVDAANAFKKIDSYEAINCLSKAIEVYTCLGKFYTVARCHMNIAAIYENDIL 121
Query: 135 DQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYEQL 186
+ +KAI HY++A+ Y GE ++ C++ IA S + D+A K++EQ+
Sbjct: 122 ELDKAIFHYENASGYYGGEGYNKLSDDCMLLIARLSIQKEDFDRAGKIFEQV 173
>sp|Q9M5P8|SNAA_SOLTU Alpha-soluble NSF attachment protein OS=Solanum tuberosum PE=2 SV=1
Length = 288
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 115/186 (61%), Gaps = 9/186 (4%)
Query: 1 MADNEQKARQLVAEAEKKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGG 60
M D+ + +AEKK+ G ++ F G+K ++A DL+ +AGN FKL K W+ G
Sbjct: 1 MGDHIARGEDFENKAEKKL-----GGWALF--GSKYEDAADLFDKAGNCFKLAKSWDKAG 53
Query: 61 NAFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAK 120
+++ HLK ++KH+A + DAA+CYKKSN EA+ +E+AV D+GR M A+
Sbjct: 54 AVYVKLANCHLKLDSKHEAANAYADAAHCYKKSNIKEAVSCLEQAVNFFLDIGRLNMSAR 113
Query: 121 HHENIAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAI 180
+++ IAE+YE+E ++ ++AI + + + E+ + N+CL KIA +SA + KAI
Sbjct: 114 YYKEIAELYEQE-QNLDQAIRYAVYEIN-PGSEDVSAPPNQCLKKIAQFSAQNEKYPKAI 171
Query: 181 KLYEQL 186
+++E++
Sbjct: 172 EIFEEI 177
>sp|Q9P4D0|SEC17_PICPG Vesicular-fusion protein SEC17 OS=Komagataella pastoris (strain
GS115 / ATCC 20864) GN=SEC17 PE=3 SV=2
Length = 297
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 108/185 (58%), Gaps = 7/185 (3%)
Query: 7 KARQLVAEAEKKISSSSKGFFSQFTGGN--KTDEAIDLYVRAGNLFKLGKKWNDGGNAFL 64
+A QL+A+A+KK + S GF S F+G + +EA DLY +A NL+++ +K N G+ F
Sbjct: 3 EAEQLIAKADKKCAPVS-GFASFFSGSGSYRFEEAADLYTQAANLYRIQRKSNKAGHVFE 61
Query: 65 QAGTLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHEN 124
+A +K ++K +A ++A CYK P++A + + +AVE G+F A
Sbjct: 62 KAADAQIKADSKDEAANSLIEAYKCYKLDAPSDAARCLNKAVEFFALKGQFRRGANFKAE 121
Query: 125 IAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSA---LTDHLDKAIK 181
+AE+YE ++ D + AI Y+ A + Y G+ ++ ANKC +K A+ S + D L KA +
Sbjct: 122 LAELYETKMADPKHAILAYEEAGEWYRGDSAEALANKCYVKAADLSCSDEVQDFL-KAAE 180
Query: 182 LYEQL 186
YE++
Sbjct: 181 SYERI 185
>sp|P32602|SEC17_YEAST Alpha-soluble NSF attachment protein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SEC17 PE=1 SV=4
Length = 292
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Query: 10 QLVAEAEKKISSSSKGFFSQFTGGN--KTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAG 67
+L+ AEKK SS GF F+G + K +EA DL V+A +++L K+ N G++FL+A
Sbjct: 6 ELLKRAEKKGVPSS-GFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAA 64
Query: 68 TLHLKNNNKHDAGLCFVDAANCYKKS-NPAEAIKAIERAVEIHTDMGRFIMVAKHHENIA 126
K N+ +AG +V+A C+K N A+ ++E A++I T G+F A +
Sbjct: 65 DYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELG 124
Query: 127 EIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYEQL 186
EI E +L D KAID Y+ A + YA +++ + +NKC IK A+ AL +A +Y +L
Sbjct: 125 EILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKL 184
>sp|Q9P6A5|SEC17_NEUCR Probable vesicular-fusion protein sec17 homolog OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=B1D1.150 PE=3 SV=1
Length = 292
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 7/182 (3%)
Query: 9 RQLVAEAEKKISSSSKGFFSQFTGGNKTDE---AIDLYVRAGNLFKLGKKWNDGGNAFLQ 65
R L EAEK ++S+SKG+ F GNK D+ A D Y++A N F+L K + G F +
Sbjct: 6 RVLQQEAEKTLASASKGW-GLF--GNKEDKYQNAADQYIQAANAFRLQKSNTEAGKCFEE 62
Query: 66 AGTLHL-KNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHEN 124
A + K +DA +DA Y+K P A++ +E A++ +T G F A H EN
Sbjct: 63 AAKIFTEKLKEPNDAANAMLDAFKVYRKDAPDNAVRCVEVAIKQYTMAGNFRRAASHKEN 122
Query: 125 IAEIYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYE 184
AE+YE EL+++ +AI Y AA+ Y + + ANK +K+A+ SAL AI+ +E
Sbjct: 123 QAEVYENELQNKPEAIKAYTTAAEWYENDGAVALANKLWLKVADLSALAGDFFAAIEKFE 182
Query: 185 QL 186
++
Sbjct: 183 KV 184
>sp|P78603|SEC17_COPC7 Vesicular-fusion protein SEC17 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=SEC17
PE=3 SV=2
Length = 289
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
Query: 8 ARQLVAEAEKKISSSSKGFFSQFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAG 67
A+ L +A+KK ++SS G+FS + +K +EA DLY +A N FKL K++ + G+AF +
Sbjct: 7 AQALFEKADKK-ANSSGGWFS--SANSKWEEAGDLYQQAANAFKLEKQFKEAGDAFAREA 63
Query: 68 TLHLKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAE 127
K DAG + +AA YK+ P AI+A+++ ++ GRF A + IA+
Sbjct: 64 ECREKCKESLDAGNAWWNAAKAYKRGYPDLAIQALQQTIQHLVAGGRFRQAADREKEIAQ 123
Query: 128 IYEKELEDQEKAIDHYQHAADCYAGEENKSSANKCLIKIANYSALTDHLDKAIKLYEQL 186
IY +E D +A + + A D YA E+ ++AN+C A+ A + +AI LYE++
Sbjct: 124 IYLQETHDLSRACESFLRAGDWYAEEDATATANQCYKDAADLYAELEQFPQAITLYERV 182
>sp|Q9LXZ5|SNAA1_ARATH Alpha-soluble NSF attachment protein 1 OS=Arabidopsis thaliana
GN=ASNAP1 PE=1 SV=1
Length = 381
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 35/148 (23%)
Query: 34 NKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNKHDAGLCFVDAANCYKKS 93
K ++A DL +A + +KL K W+ G A+L+ HLK N+ AN Y
Sbjct: 115 TKYEDAADLLEKARDSYKLAKSWDQAGIAYLKLADCHLKANS----------LANTY--- 161
Query: 94 NPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELEDQEKAIDHYQHAADCYAGE 153
IM IAE YE + E E+AI +Y+ AA+ + E
Sbjct: 162 ---------------------MIMDECMDHEIAEYYESD-EMFEQAIAYYETAAEFFQIE 199
Query: 154 ENKSSANKCLIKIANYSALTDHLDKAIK 181
E +SAN+C +K+A Y++ + + +K
Sbjct: 200 EVTTSANQCNLKVAQYASQLEQQSRFMK 227
>sp|Q9CWZ7|SNAG_MOUSE Gamma-soluble NSF attachment protein OS=Mus musculus GN=Napg PE=1
SV=1
Length = 312
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Query: 37 DEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNP- 95
D A Y +A FK K++ +A L+ H N A + A K+
Sbjct: 32 DSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKL 91
Query: 96 AEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELEDQEKAIDHYQHAADCYAGEEN 155
EA++ IE+A ++ + G A E ++ E D EKA+ YQ A+ + EE
Sbjct: 92 PEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENV--DPEKAVQLYQQTANVFENEER 149
Query: 156 KSSANKCLIKIANYSALTDHLDKA 179
A + L K + D+A
Sbjct: 150 LRQAVELLGKASRLLVRGRRFDEA 173
>sp|Q99747|SNAG_HUMAN Gamma-soluble NSF attachment protein OS=Homo sapiens GN=NAPG PE=1
SV=1
Length = 312
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Query: 37 DEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNP- 95
D A Y +A FK K++ +A L+ H N A + A K+
Sbjct: 32 DSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKL 91
Query: 96 AEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELEDQEKAIDHYQHAADCYAGEEN 155
EA++ IE+A ++ + G A E ++ E D EKA+ YQ A+ + EE
Sbjct: 92 PEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENV--DPEKAVQLYQQTANVFENEER 149
Query: 156 KSSANKCLIKIANYSALTDHLDKA 179
A + L K + D+A
Sbjct: 150 LRQAVELLGKASRLLVRGRRFDEA 173
>sp|P81127|SNAG_BOVIN Gamma-soluble NSF attachment protein OS=Bos taurus GN=NAPG PE=1
SV=3
Length = 312
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Query: 37 DEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNKHDAGLCFVDAANCYKKSNP- 95
D A Y +A FK K++ +A L+ H N A + A K+
Sbjct: 32 DSAASEYGKAAVAFKNAKQFEQAKDACLKEAVAHENNRALFHAAKAYEQAGMMLKEMQKL 91
Query: 96 AEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEKELEDQEKAIDHYQHAADCYAGEEN 155
EA++ IE+A ++ + G A E ++ E D EKA+ YQ A+ + EE
Sbjct: 92 PEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENV--DPEKAVQLYQQTANVFENEER 149
Query: 156 KSSANKCLIKIANYSALTDHLDKA 179
A + L K + D+A
Sbjct: 150 LRQAVELLGKASRLLVRGRRFDEA 173
>sp|Q9JJ79|DYHC2_RAT Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus GN=Dync2h1
PE=1 SV=1
Length = 4306
Score = 30.4 bits (67), Expect = 6.7, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 157 SSANKCLIKIANYSALTDHLDKAIKLYEQL 186
SSA K + + ANY + + + KA++LYEQL
Sbjct: 1940 SSALKQVFEEANYEVIPNQMKKALELYEQL 1969
>sp|Q45VK7|DYHC2_MOUSE Cytoplasmic dynein 2 heavy chain 1 OS=Mus musculus GN=Dync2h1 PE=1
SV=1
Length = 4306
Score = 30.4 bits (67), Expect = 6.9, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 157 SSANKCLIKIANYSALTDHLDKAIKLYEQL 186
SSA K + + ANY + + + KA++LYEQL
Sbjct: 1940 SSALKQVFEEANYEVIPNQMKKALELYEQL 1969
>sp|Q9PAE3|ISPG_XYLFA 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Xylella
fastidiosa (strain 9a5c) GN=ispG PE=3 SV=1
Length = 417
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 15 AEKKISSSSKGFFSQFTGGNKTD----EAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLH 70
A+ +I+ + GF G K D + I+ +R G ++G W G + A L
Sbjct: 117 AKYRINPGNVGF------GKKRDLQFGQLIECAIRYGKPIRIGANW--GSLDQMLAAQLM 168
Query: 71 LKNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAK 120
+NN + DAA ++ A+ + ERAVE+ R ++ AK
Sbjct: 169 DENNRRKQPW----DAAQVLREVLICSAVGSAERAVELGLPRDRIVLSAK 214
>sp|Q9JKU3|IF172_RAT Intraflagellar transport protein 172 homolog OS=Rattus norvegicus
GN=Ift172 PE=1 SV=1
Length = 1749
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 29/109 (26%)
Query: 30 FTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNKHDAGLCFVDAANC 89
+T G++T +AID+Y +AG +W QA L +K D + ++ A
Sbjct: 935 YTKGDRTKDAIDMYTQAG-------RWE-------QAHKLAMKCMRPEDVSVLYITQAQE 980
Query: 90 YKKSNPAEAIKAIERAVE-------------IHTDMGRFIMVAKHHENI 125
+K + + VE ++ DM R +V KHH ++
Sbjct: 981 MEKQGKYREAERLYVTVEEPDLAITMFKKHKLYDDMIR--LVGKHHPDL 1027
>sp|Q6VH22|IF172_MOUSE Intraflagellar transport protein 172 homolog OS=Mus musculus
GN=Ift172 PE=1 SV=1
Length = 1749
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 29/109 (26%)
Query: 30 FTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHLKNNNKHDAGLCFVDAANC 89
+T G++T +AID+Y +AG +W QA L +K D + ++ A
Sbjct: 935 YTKGDRTKDAIDMYTQAG-------RWE-------QAHKLAMKCMRPEDVSVLYITQAQE 980
Query: 90 YKKSNPAEAIKAIERAVE-------------IHTDMGRFIMVAKHHENI 125
+K + + VE ++ DM R +V KHH ++
Sbjct: 981 MEKQGKYREAERLYVTVEEPDLAITMFKKHKLYDDMIR--LVGKHHPDL 1027
>sp|B2W244|SEY1_PYRTR Protein sey1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
GN=sey1 PE=3 SV=2
Length = 862
Score = 30.0 bits (66), Expect = 8.0, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 30/124 (24%)
Query: 13 AEAEKKISSSSKGFFS-QFTGGNKTDEAIDLYVRAGNLFKLGKKWNDGGNAFLQAGTLHL 71
AE E K+ + K F Q T +K+ G F +A + +
Sbjct: 394 AELEGKVDTRLKALFQKQLTAAHKS----------------------GIEGFTEAVSAAV 431
Query: 72 KNNNKHDAGLCFVDAANCYKKSNPAEAIKAIERAVEIHTDMGRFIMVAKHHENIAEIYEK 131
KN K +A F + KK KA+ + E T M HEN +IY+K
Sbjct: 432 KNGQKKNASYDFAQIVDSEKK-------KALTKFEEDATAMAIEGAAWSSHENELKIYKK 484
Query: 132 ELED 135
EL+D
Sbjct: 485 ELDD 488
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,127,113
Number of Sequences: 539616
Number of extensions: 2819272
Number of successful extensions: 6552
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 6487
Number of HSP's gapped (non-prelim): 66
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)