BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5289
(813 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|405960469|gb|EKC26394.1| DNA mismatch repair protein Msh2 [Crassostrea gigas]
Length = 915
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 337/897 (37%), Positives = 513/897 (57%), Gaps = 101/897 (11%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLVNKSNLS 66
P+K TT+RFF+R ++Y VHG+DA + ++ V ++K +G +K LE+V V+K N
Sbjct: 16 LPEKPSTTVRFFDRTDYYTVHGQDAVFVAKEVFKTVAVIKYLGAGEKKLESVTVSKLNFE 75
Query: 67 CFSHILCVISE-------DKT--------------------LETVLTNT----------- 88
L +I + +KT E +L
Sbjct: 76 SLVKELLLIRQYRVEIFKNKTGSKNNEWMLAFKASPGNLTQFEDILFGNSDISQSVGVLG 135
Query: 89 -----------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDN 137
VGV D+ +K + E D+D +SNLEA+IVQ KEC++ L+
Sbjct: 136 LKIGTENNERMVGVGFADVMMRKMLVAEFADNDQFSNLEALIVQMGAKECVVGTGDLH-- 193
Query: 138 KNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHC 197
K+ +L+R+ + +T RKK++FS +D++QD+NRL++ + N+ L EM A
Sbjct: 194 TGKLRQVLERSNILITERKKSDFSSKDVVQDLNRLLKCKKGQQVNSATLSEMEKKIAMEA 253
Query: 198 LRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
+ +LI YLEL++NED QFSI S D+S+Y+ + SA + +L++ P S+ S+LG
Sbjct: 254 VSALIKYLELLSNEDYFGQFSIGSFDFSQYMKLDSAAVQALNLFPT--SSDGNKNQSILG 311
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
++DRC+T QG RLLAQW+KQPL D++ I ER V V +TE R + E LR LPD Q
Sbjct: 312 LMDRCKTVQGQRLLAQWIKQPLMDINRIEERQKLVEFFVKDTELRQLVAEDHLRRLPDFQ 371
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQ 370
LA + ++KA L+DCYRVY+ + +LP L+ LE L+ + + IL
Sbjct: 372 RLARKFQQRKATLQDCYRVYQALDKLPHLMETLEKHGMESCQLIMEIFVNPAKEILMDFA 431
Query: 371 SLKMM-----------------------------DRKDAVMDKMKEYLESTARRLNLVAD 401
+ M ++ + DK+K L AR L + A+
Sbjct: 432 KFQEMVEETMDLQQVENHEFLIKPGFDEELQALSEKISDLEDKIKSQLNKVARDLGIEAN 491
Query: 402 KTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
K +KLE++ Q G+ +R+T K ++ + Y +DT GVRF ++ + N Y +
Sbjct: 492 KVLKLESNAQLGYFFRVTRKEEKALRNNKNYITIDTKNNGVRFHNNAVKQLNEDYLKAKE 551
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY Q+SIV E+I I+AGY +T+ L++++AQ DVLVSF++++T AP P+VRP + P G
Sbjct: 552 EYSEQQKSIVAEIISIAAGYCETMVILNELIAQLDVLVSFAVSATSAPIPFVRPSLLPKG 611
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+G++ L RHP +E+Q +S+IPND+ F+ + F+++TGPNMGGKSTYIRS GV V L
Sbjct: 612 SGNIKLIDARHPCLEMQEDISFIPNDIIFEKDKQMFHIITGPNMGGKSTYIRSAGVVVLL 671
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQIG +VPC A +++VD I RVGA D+Q +GISTFM EM ETA+++K TENSL+IID
Sbjct: 672 AQIGSYVPCSEAQVTIVDSILARVGAGDNQVKGISTFMAEMLETASILKSATENSLMIID 731
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
ELGRGTST+DGFG+A +I+ +A+ + F LFATHFHE+ L+ IPT N+ V+AL
Sbjct: 732 ELGRGTSTYDGFGLAWAISEHIATKIKGFCLFATHFHELTTLADKIPTVNNLHVTALTSN 791
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE----YSLDTKTPSGDE 754
D L LLY+VK G C +S+G+H A++A +P ++E ++ E E L+T DE
Sbjct: 792 DTLTLLYRVKQGPCDQSFGIHVAELAHFPAHVIEFSKKKAAELEDFQSVELETSLKGDDE 851
Query: 755 TNNREEEYFKTVQEGEYQMFDFLQQC--LSLSKQKDTNRILHLQETQEPGIEEYQSF 809
++ + K +EG + +FL L +S D + + ++E ++ +++ +F
Sbjct: 852 PAVKKRKMEK--EEGVEIIQNFLDSVKKLPISSMSDQDILSKMKEMKQQVLDQNNAF 906
>gi|15625578|gb|AAL04169.1|AF412833_1 mismatch repair protein Msh2 [Danio rerio]
Length = 936
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 336/877 (38%), Positives = 499/877 (56%), Gaps = 103/877 (11%)
Query: 1 HKFYLFFFPQKSK--TTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTL 55
H F F+F K TT+R F+R ++Y VHG+DA + K+N V +K +G ++ L
Sbjct: 17 HGFLNFYFSMSDKPDTTVRVFDRNDYYTVHGKDAIFAAKEVFKTNGV--IKNLGSGNRRL 74
Query: 56 ETVLVNK-----------------------------------------SNLSCFSHIL-- 72
E+V+++K NL+ F IL
Sbjct: 75 ESVVLSKMNFESFVRDLLLVRQYRVEVYKNASKSSKEHDWQIAFKASPGNLTQFEEILFG 134
Query: 73 ----------CVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQK 122
V+ T VGV VD +K + E PD+D +SNLEA++VQ
Sbjct: 135 SGGGPAEGAVGVVGVRLGTGTDGQRVVGVGYVDSTLRKLGVCEFPDNDQFSNLEALLVQI 194
Query: 123 SPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN 182
PKEC+LPA + K+ ++ R + +T RKK+EF+ +D++QD+NRL++ E +
Sbjct: 195 GPKECVLPAGDSGGDLGKLKQVVQRGGILLTDRKKSEFTTKDIVQDLNRLLKARKGETVS 254
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
+ LPEM A CL ++I YLEL+ +E N F + + D ++Y+ + +A + +L++
Sbjct: 255 SAALPEMEKKIAMSCLEAVIRYLELLADEANFGSFKMTTFDLNQYMRLDNAAVQALNLF- 313
Query: 243 QQGST-SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEA 301
QGS A SL G+L++CRTPQG RL+ QW+KQPL D + I ER V V ++E
Sbjct: 314 -QGSCDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKNKIEERLDLVETFVEDSEL 372
Query: 302 RMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LV 354
R + E LR PD+ +A + R+ + L+DCYRVY+ V QLP ++ LE L+
Sbjct: 373 RKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQSVGQLPNVVLALERYSGKHQVLL 432
Query: 355 QNVEASNLNTILSSLQSLKMM-----------------------------DRKDAVMDKM 385
S LN ++S + M + D + M
Sbjct: 433 HAAFISPLNDLISDFSKFQEMIETTLDMNQVEHHEFLVKPSFDPTLSDLRENMDRLEKAM 492
Query: 386 KEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+ L S AR L L A KT+KLE++ Q G+ +R+T K S+ + ++T LD + GVRF
Sbjct: 493 QAALSSAARGLGLEATKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFTTLDVQKNGVRFT 552
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+ +L++ N +Y + EYE Q +IV+E+I I+AGY + L++V+AQ D +VSF++ S
Sbjct: 553 NSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIAQLDAVVSFAVVS 612
Query: 503 TCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNM 562
AP P++RP + G+G LVL RHP VE Q V++IPNDV F SGE F+++TGPNM
Sbjct: 613 HTAPVPFIRPKILEKGSGRLVLKAARHPCVEAQDEVAFIPNDVTFISGEKMFHIITGPNM 672
Query: 563 GGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKET 622
GGKSTYIR +GV V +AQIGCFVPCD A +SVVD + RVGA DSQ +G+STFM EM ET
Sbjct: 673 GGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIKGVSTFMAEMLET 732
Query: 623 ATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR 682
A +++ +E+SL+IIDELGRGTST+DGFG+A +I+ +A+ + F LFATHFHE+ L++
Sbjct: 733 AAILRSASEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLFATHFHELTALAQ 792
Query: 683 VIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+PT RN+ V+AL + L +LY+VK G C +S+G+H A++A +P+ ++ AR+ E E
Sbjct: 793 QVPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELASFPKHVIANAREKALELE 852
Query: 743 YSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQ 779
D + G+E + ++ QEGE + FL +
Sbjct: 853 EFQDISS-VGEEAGPKAKKRCMEKQEGEKIIEAFLAK 888
>gi|47087243|ref|NP_998689.1| DNA mismatch repair protein Msh2 [Danio rerio]
gi|28278396|gb|AAH44370.1| MutS homolog 2 (E. coli) [Danio rerio]
Length = 936
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 333/880 (37%), Positives = 499/880 (56%), Gaps = 101/880 (11%)
Query: 1 HKFYLFFFPQKSK--TTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTL 55
H F F+F K TT+R F+R ++Y VHG+DA + K+N V +K +G ++ L
Sbjct: 17 HGFLNFYFSMSDKPDTTVRVFDRNDYYTVHGKDAIFAAKEVFKTNGV--IKNLGSGNRRL 74
Query: 56 ETVLVNK-----------------------------------------SNLSCFSHIL-- 72
E+V+++K NL+ F IL
Sbjct: 75 ESVVLSKMNFESFVRDLLLVRQYRVEVYKNASKSSKEHDWQIAFKASPGNLTQFEEILFG 134
Query: 73 ----------CVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQK 122
V+ T VGV VD +K + E PD+D +SNLEA++VQ
Sbjct: 135 SGGGPAEGAVGVVGVRLGTGTDGQRVVGVGYVDSTLRKLGVCEFPDNDQFSNLEALLVQI 194
Query: 123 SPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN 182
PKEC+LPA ++ K+ ++ R + +T RKK+EF+ +D++QD+NRL++ E +
Sbjct: 195 GPKECVLPAGDSGGDQGKLKQVVQRGGILLTDRKKSEFTTKDIVQDLNRLLKARKGETVS 254
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
+ LPEM A CL ++I YLEL+ +E N F + + D ++Y+ + +A + +L++
Sbjct: 255 SAALPEMEKKIAMSCLEAVIKYLELLADEANFGSFKMTTFDLNQYMRLDNAAVQALNLF- 313
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
Q S A SL G+L++CRTPQG RL+ QW+KQPL D + I ER V V ++E R
Sbjct: 314 QGSSDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKNKIEERLDLVETFVEDSELR 373
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQ 355
+ E LR PD+ +A + R+ + L+DCYRVY+ V QLP ++ LE L+
Sbjct: 374 KSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQSVGQLPNVVLALERYSGKHQVLLH 433
Query: 356 NVEASNLNTILSSLQSLKMM-----------------------------DRKDAVMDKMK 386
S LN ++S + M + D + M+
Sbjct: 434 AAFISPLNDLISDFSKFQEMIETTLDMNQVEHHEFLVKPSFDPTLSDLRENMDRLEKAMQ 493
Query: 387 EYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQD 443
L S AR L L A KT+KLE++ Q G+ +R+T K S+ + ++T LD + GVRF +
Sbjct: 494 AALSSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFTTLDVQKNGVRFTN 553
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
+L++ N +Y + EYE Q +IV+E+I I+AGY + L++V+AQ D ++SF++ S
Sbjct: 554 SKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIAQLDAVLSFAVVSH 613
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP P++RP + G+G LVL RHP VE Q V++IPNDV F GE F+++TGP+MG
Sbjct: 614 AAPVPFIRPKILEKGSGRLVLKAARHPCVEAQDEVAFIPNDVTFIRGEKMFHIITGPSMG 673
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR +GV V +AQIGCFVPCD A +SVVD + RVGA DSQ +G+STFM EM ETA
Sbjct: 674 GKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIKGVSTFMAEMLETA 733
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
+++ TE+SL+ IDELGRGTST+DGFG+A +I+ +A+ + F LFATHFHE+ L++
Sbjct: 734 AILRSATEDSLITIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLFATHFHELTALAQQ 793
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY 743
+PT RN+ V+AL + L +LY+VK G C +S+G+H A++A +P+ ++ AR+ E E
Sbjct: 794 VPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELASFPKHVIANAREKALELEE 853
Query: 744 SLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSL 783
D + G+E + ++ QEGE + FL + S+
Sbjct: 854 FQDISS-VGEEAGPKAKKRCMEKQEGERIIEAFLAKVKSM 892
>gi|182889828|gb|AAI65693.1| Msh2 protein [Danio rerio]
Length = 936
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 333/880 (37%), Positives = 498/880 (56%), Gaps = 101/880 (11%)
Query: 1 HKFYLFFFPQKSK--TTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTL 55
H F F+F K TT+R F+R ++Y VHG+DA + K+N V +K +G ++ L
Sbjct: 17 HGFLNFYFSMSDKPDTTVRVFDRNDYYTVHGKDAIFAAKEVFKTNGV--IKNLGSGNRRL 74
Query: 56 ETVLVNK-----------------------------------------SNLSCFSHIL-- 72
E+V+++K NL+ F IL
Sbjct: 75 ESVVLSKMNFESFVRDLLLVRQYRVEVYKNASKSSKEHDWQIAFKASPGNLTQFEEILFG 134
Query: 73 ----------CVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQK 122
V+ T VGV VD +K + E PD+D +SNLEA++VQ
Sbjct: 135 SGGGPAEGAVGVVGVRLGTGTDGQRVVGVGYVDSTLRKLGVCEFPDNDQFSNLEALLVQI 194
Query: 123 SPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN 182
PKEC+LPA ++ K+ ++ R + +T RKK+EF+ +D++QD+NRL++ E +
Sbjct: 195 GPKECVLPAGDSGGDQGKLKQVVQRGGILLTDRKKSEFTTKDIVQDLNRLLKARKGETVS 254
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
+ LPEM A CL ++I YLEL+ +E N F + + D ++Y+ + +A + +L++
Sbjct: 255 SAALPEMEKKIAMSCLEAVIKYLELLADEANFGSFKMTTFDLNQYMRLDNAAVQALNLF- 313
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
Q S A SL G+L++CRTPQG RL+ QW+KQPL D + I ER V V ++E R
Sbjct: 314 QGSSDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKNKIEERLDLVETFVEDSELR 373
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQ 355
+ E LR PD+ +A + R+ + L+DCYRVY+ V QLP ++ LE L+
Sbjct: 374 KSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQSVGQLPNVVLALERYSGKHQVLLH 433
Query: 356 NVEASNLNTILSSLQSLKMM-----------------------------DRKDAVMDKMK 386
S LN ++S + M + D M+
Sbjct: 434 AAFISPLNDLISDFSKFQEMIETTLDMNQVEHHEFLVKPSFDPTLSDLRENMDRSEKAMQ 493
Query: 387 EYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQD 443
L S AR L L A KT+KLE++ Q G+ +R+T K S+ + ++T LD + GVRF +
Sbjct: 494 AALSSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFTTLDVQKNGVRFTN 553
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
+L++ N +Y + EYE Q +IV+E+I I+AGY + L++V+AQ D ++SF++ S
Sbjct: 554 SKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIAQLDAVLSFAVVSH 613
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP P++RP + G+G LVL RHP VE Q V++IPNDV F GE F+++TGP+MG
Sbjct: 614 AAPVPFIRPKILEKGSGRLVLKAARHPCVEAQDEVAFIPNDVTFIRGEKMFHIITGPSMG 673
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR +GV V +AQIGCFVPCD A +SVVD + RVGA DSQ +G+STFM EM ETA
Sbjct: 674 GKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIKGVSTFMAEMLETA 733
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
+++ TE+SL+ IDELGRGTST+DGFG+A +I+ +A+ + F LFATHFHE+ L++
Sbjct: 734 AILRSATEDSLITIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLFATHFHELTALAQQ 793
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY 743
+PT RN+ V+AL + L +LY+VK G C +S+G+H A++A +P+ ++ AR+ E E
Sbjct: 794 VPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELASFPKHVIANAREKALELEE 853
Query: 744 SLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSL 783
D + G+E + ++ QEGE + FL + S+
Sbjct: 854 FQDISS-VGEEAGPKAKKRCMEKQEGERIIEAFLAKVKSM 892
>gi|380027167|ref|XP_003697302.1| PREDICTED: DNA mismatch repair protein Msh2-like [Apis florea]
Length = 919
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 344/889 (38%), Positives = 505/889 (56%), Gaps = 99/889 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKDKTLETVL 59
F FF P+K TT+RFFNR ++Y +HG DA Q + K +G E V+
Sbjct: 19 FVRFFKSLPEKLNTTVRFFNRSDYYTLHGNDALFAAQEIFKTTSVCKMIGADPYKTEGVI 78
Query: 60 VNKSNLSCFSHILCVISEDKT---------------------------LETVLTNT---- 88
+NK++ F L ++ + + E +L +
Sbjct: 79 LNKNHFESFIRDLLLVKQYRVEVYINQGTAKNQNWILEYKGSPGNLTQFEDILFGSNDIA 138
Query: 89 ------------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
VG++ VD F + E D++ +SNLE++IV +PKECLL
Sbjct: 139 VSVRVIAVKLGMEGKFRIVGLSCVDTTATLFSVCEFQDNESFSNLESLIVTLAPKECLLI 198
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
+ + +++RN V +T RKKNEFS E ++QD+N L+RF + +N + LPE+
Sbjct: 199 QGEGSYEFQTLKQLIERNNVMVTTRKKNEFSSESVIQDLNTLIRFKKGQQQNVQSLPEVN 258
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST--S 248
LT A +LI YL+L ++E N+NQFSI I S+++ + SA + +L++ P+ ++ +
Sbjct: 259 LTFAMSATSALIKYLDLTSDEGNLNQFSIDQIKQSRFLKLDSAAIKALNIEPRVDTSVLN 318
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
S+L +LD+CRTPQGHRLLAQW++QPLKDL I ERH V LVN+ E R NL+E
Sbjct: 319 GNAPTSILNLLDKCRTPQGHRLLAQWIRQPLKDLSLIKERHDIVEALVNDNELRSNLNED 378
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNT 364
LR +PD+Q LA ++ RKKA L+DCY++Y +S LP L+ + ++ + LN
Sbjct: 379 HLRRIPDLQVLAKKLARKKATLQDCYKIYTCISHLPILLEQFPKINIIALKTMFTDPLNE 438
Query: 365 ILSSLQSLKMMDRK-----------------------------DAVMDKMKEYLESTARR 395
+ + + M + D + K++ L A
Sbjct: 439 FIKDMNKFQQMVEQTIDLDSAEKGDFLVRSEFDDELKELKCTMDEIEIKLQAQLNKVADD 498
Query: 396 LNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQ 452
L++ A K +KLE++ Q G+ +R+T+K + ++ Y ILD+ + GVRF+ ++L N +
Sbjct: 499 LSIEAGKILKLESNQQFGYYFRVTLKEEKVLRNKKQYIILDSNKSGVRFRSNKLNDLNDE 558
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
Y AI+ +Y Q+ +V E+I I+AGY+ T+ + +VLA DVL +F+ A+ CA KPYVRP
Sbjct: 559 YIAIRDKYIMEQKKVVAEIIEIAAGYSNTIKAIGNVLASLDVLTAFASAAVCANKPYVRP 618
Query: 513 CMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSI 572
M P G L Q RHP +E+Q GV YI N++ FK E F ++TGPNMGGKSTYIRS
Sbjct: 619 EMLPSEKGEFNLIQVRHPCLEVQEGVDYIANNINFKR-ECHFCIITGPNMGGKSTYIRSA 677
Query: 573 GVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
GVS +A IG FVPCD A IS++D I RVGA D Q +G+STFMMEM ETA ++K T N
Sbjct: 678 GVSALMAHIGSFVPCDQARISLLDCILARVGADDCQLKGLSTFMMEMIETAAILKTATCN 737
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV 692
SLV+IDELGRGTST++G G+A SIA LA + + LFATHFHEI L I T +N V
Sbjct: 738 SLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATHFHEITKLEEEISTVKNQHV 797
Query: 693 SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
+AL ++ L LLY++KPG C +S+G+H AKMA +P+D++E A+ E E D+
Sbjct: 798 TALVDDNKLTLLYKIKPGICDQSFGIHVAKMANFPQDIIEFAKRKQAELEDYQDSLFEGS 857
Query: 753 DETNNREEEYFKTVQEGEYQMFDFLQQC----LSLSKQKDTNRILHLQE 797
D ++ + +QE E + +F+ +C LSLS + ++IL +E
Sbjct: 858 DNPTKKK----RILQEAEILIAEFIDKCKNLDLSLSDAELKDKILTFKE 902
>gi|328792194|ref|XP_001121207.2| PREDICTED: DNA mismatch repair protein Msh2 [Apis mellifera]
Length = 920
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 351/894 (39%), Positives = 506/894 (56%), Gaps = 108/894 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKDKTLETVL 59
F FF P+K TT+RFFNR ++Y +HG DA Q + K +G E V+
Sbjct: 19 FVRFFKNLPEKLNTTVRFFNRSDYYTLHGNDALFAAQEIFKTTSVCKMIGADPYKTEGVI 78
Query: 60 VNKSNLSCFSHILCVISEDKT---------------------------LETVLTNT---- 88
+NK++ F L ++ + + E +L
Sbjct: 79 LNKNHFESFIRDLLLVKQYRVEVYINQGTAKNQNWILEYKGSPGNLTQFEDILFGNNDIA 138
Query: 89 ------------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
VG++ VD F + E D++ +SNLE++IV +PKECLL
Sbjct: 139 VSVRVIAVKLGIEGKFRIVGLSCVDTTATLFSVCEFQDNESFSNLESLIVTLAPKECLLI 198
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
+ + +++RN V +T RKKNEFS E ++QD+N L+RF + +N + LPE+
Sbjct: 199 QGEGSYEFQTLKQLIERNNVMITTRKKNEFSSESVIQDLNTLIRFKKGQQQNVQSLPEVN 258
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST--- 247
LT A +LI YL+L ++E N+NQFSI I S+Y+ + SA + +L++ P+ ++
Sbjct: 259 LTFAMSATSALIKYLDLTSDEGNLNQFSIDQIKQSRYLKLDSAAIKALNIEPRIDTSCVL 318
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ S+L +LD+CRTPQGHRLLAQW++QPLKDL I ERH V +LVN+ E R NL+E
Sbjct: 319 NGNAPTSILNLLDKCRTPQGHRLLAQWIRQPLKDLSLIKERHDIVEVLVNDNELRSNLNE 378
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
LR +PD+Q LA ++ RKKA L+DCY++Y +S LP L+ + L N+ A L T+ +
Sbjct: 379 DHLRRIPDLQVLAKKLARKKATLQDCYKIYTCMSHLPILLE--QFLKINIIA--LKTMFT 434
Query: 368 SLQS--LKMMDR-----------------------------------KDAVMDKMKEYLE 390
S +K MD+ D + K++ L
Sbjct: 435 DPLSEFIKDMDKFQQMVEQTIDLDSAEKGDFLVRPEFDDELKELKCTMDEIEIKLQAQLN 494
Query: 391 STARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLA 447
A L++ A K +KLE++ Q G+ +R+T+K + ++ Y ILD+ + GVRF+ ++L
Sbjct: 495 KVADDLSIEAGKILKLESNQQFGYYFRVTLKEEKVLRNKKQYIILDSNKSGVRFRSNKLN 554
Query: 448 TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPK 507
N +Y I+ +Y Q+ +V E+I I+AGY+ T+ + +VLA DVL +F+ A+ CA K
Sbjct: 555 DLNDEYIGIRDKYIMEQKKVVAEIIEIAAGYSNTIKAIGNVLASIDVLTAFASAAICANK 614
Query: 508 PYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
PYVRP M P G L Q RHP +E+Q GV YI ND+ FK E F ++TGPNMGGKST
Sbjct: 615 PYVRPEMLPSEKGEFNLIQVRHPCLEVQEGVDYIANDINFKR-ECHFCIITGPNMGGKST 673
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
YIRS GV+ +A IG FVPCD A IS++D I RVGA D Q +G+STFMMEM ETA ++K
Sbjct: 674 YIRSAGVTALMAHIGSFVPCDQARISLLDCILARVGADDCQLKGLSTFMMEMIETAAILK 733
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
T NSLV+IDELGRGTST++G G+A SIA LA + + LFATHFHEI L I T
Sbjct: 734 TATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATHFHEITKLEEEISTV 793
Query: 688 RNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
+N V+AL + L LLY++KPG C +S+G+H AKMA +P+D++E A+ E E D+
Sbjct: 794 KNQHVTALVDNNKLTLLYKIKPGICDQSFGIHVAKMANFPQDVIEFAKRKQAELEDYQDS 853
Query: 748 KTPSGDETNNREEEYFKTVQEGEYQMFDFLQQC----LSLSKQKDTNRILHLQE 797
D + K +QE E + +F+ +C LSLS + ++IL +E
Sbjct: 854 LFEGSDNPQKKR----KIIQEAEIFIAEFIDKCKNLDLSLSDAELKDKILTFKE 903
>gi|322785419|gb|EFZ12092.1| hypothetical protein SINV_12798 [Solenopsis invicta]
Length = 895
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 344/869 (39%), Positives = 496/869 (57%), Gaps = 100/869 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKDKTLETVLVNKSNLSCF 68
QK TTIRFFNR ++Y VHG DA Q + K +G + E V++NKS+ F
Sbjct: 1 QKLDTTIRFFNRSDYYTVHGSDALFAAQEIFKTTSVCKMIGAEPHKTEGVILNKSHFETF 60
Query: 69 SHILCVISEDKT---------------------------LETVL---------------- 85
L ++ + + E +L
Sbjct: 61 VRDLLLVKQYRVEVYVNQGSSKNQNWILEYKGSPGNLSHFEDILFGNNDVAVGVSVIAVK 120
Query: 86 ------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
+ VG++ VD+ + + E D++ +SNLEA+IV +PKECLL +
Sbjct: 121 LGTEGKSRVVGLSCVDVVSTLISVTEFQDNESFSNLEALIVTLAPKECLLIQGEGSYEFQ 180
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
+ +++R+ V +T RKK EF+ + ++ D+N L++F + +NA+ LPE+ L A
Sbjct: 181 TLKQLIERSNVMVTLRKKTEFASDSIIDDLNTLIKFKKGQKQNAQSLPEVNLNLAMSATS 240
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS---AQTYDSLL 256
+LI YL+L ++E ++NQF ++ I+ S+Y+ + SA + +L++ PQ + S S+L
Sbjct: 241 ALIKYLDLTSDEGHLNQFKLNQIEQSRYIRLDSAAIRALNIEPQADAISNLHGNPVSSIL 300
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
+LD+CRT QGHRL+AQW++QPL+DL I ERH V +LV N E R L + L+ +PD+
Sbjct: 301 TLLDKCRTAQGHRLIAQWVRQPLRDLSLIKERHDIVELLVQNNELRSILSDDYLKRIPDL 360
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNT-ILSSLQSL--- 372
Q LA ++ RKK+ L+DCY++Y VS LPKL LE L Q + L T I+ L+ L
Sbjct: 361 QQLAKKLARKKSVLQDCYKIYLCVSYLPKL---LEQLSQEENVTALKTMIIDPLKELVND 417
Query: 373 --------------------------KMMDRKDAVMDKMKEYLESTARRLN-------LV 399
D + D M E E+ ++LN L
Sbjct: 418 MDKFQQLVEQTIDLDAAEKGEFMVNPGFADDLKVLKDAMTETEETIQQQLNKAANDLCLE 477
Query: 400 ADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAI 456
A K IKLEN+ Q G+ +RIT+K + ++ YTILD+ + G+RF+++RL N +
Sbjct: 478 AGKVIKLENNQQFGYYFRITLKEEKILRNKKHYTILDSNKAGIRFRNNRLNELNDDFTDA 537
Query: 457 QREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP 516
+ +Y Q+ ++ E++GI+AGY+ T+ + DVLA FDVL SF+ A+ A K YVRP M
Sbjct: 538 RNKYMERQKDVITEIVGIAAGYSGTVRAIGDVLACFDVLTSFASAAISANKMYVRPKMVS 597
Query: 517 MGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
G L L Q RHP +E+Q GV YI ND+ FK + F ++TGPNMGGKSTYIRS+GV+
Sbjct: 598 SEEGELNLTQVRHPCLEMQQGVDYIANDIDFKRDQYRFCIITGPNMGGKSTYIRSVGVAA 657
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+A IG FVPCD ATIS++D I TRVGA DSQ +G+STFMMEM E A ++K T NSLVI
Sbjct: 658 LMAHIGSFVPCDKATISLLDCILTRVGADDSQLKGLSTFMMEMIEIAAILKTATCNSLVI 717
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
IDELGRGTST++G G+A SIA LA + + LFATHFHEI L+ IP +N V+AL
Sbjct: 718 IDELGRGTSTYEGCGIAWSIAEHLARDIKSYCLFATHFHEITKLAEEIPIVKNQHVTALV 777
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETN 756
++D L LLYQVKPG C +S+G+H AKMA +P D++E A K + L+ E +
Sbjct: 778 EDDKLTLLYQVKPGICDQSFGLHVAKMANFPLDVIEFA----KRKQAELENYEGIAFEGS 833
Query: 757 NREEEYFKTVQEGEYQMFDFLQQCLSLSK 785
+ ++ K +QEGE + FL +C L +
Sbjct: 834 DNPQKKRKIIQEGEILISQFLTKCKDLDQ 862
>gi|350423484|ref|XP_003493495.1| PREDICTED: DNA mismatch repair protein Msh2-like [Bombus impatiens]
Length = 921
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 334/874 (38%), Positives = 500/874 (57%), Gaps = 95/874 (10%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKDKTLETVL 59
F FF P+K TTIRFFNR ++Y +HG DA Q + K +G E V+
Sbjct: 19 FVRFFKNLPEKLNTTIRFFNRSDYYTLHGNDALFAAQEVFKTTSVCKMIGADPYKTEGVI 78
Query: 60 VNKSNLSCFSHILCVI---------------SEDKTLE-------------TVLTNT--- 88
+NK++ F L ++ +++ LE T+ N
Sbjct: 79 LNKNHFESFIRDLLLVKQYRVEVYVNQGSAKNQNWVLEYKGSPGNLTQFEDTLFGNNDVA 138
Query: 89 ------------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
VG++ VD F + E D++ +SNLE+++V +PKECLL
Sbjct: 139 VSVHVIAVKLGMEAKSRIVGLSCVDTTATSFSVCEFQDNESFSNLESMVVTLAPKECLLI 198
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
+ + +++RN V +T RK++EFS E ++QD+N L++F + +N + LPE+
Sbjct: 199 QGEGSYEFQTLKQVMERNNVMVTTRKRSEFSSESVIQDLNTLIKFKKGQQQNVQSLPEIN 258
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS-- 248
L+ A +LI YL+L ++E N+NQF+I I S+Y+ + SA + +L++ + ++S
Sbjct: 259 LSFAMSATSALIKYLDLTSDEGNLNQFAIDQIKESRYLKLDSAAIKALNIESRVDTSSIL 318
Query: 249 -AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S+LGILD+CRT QGHRLLAQW++QPLKDL I ERH V LVN+ E R NL E
Sbjct: 319 NGNAPTSILGILDKCRTSQGHRLLAQWIRQPLKDLCLIKERHDIVETLVNDNELRTNLSE 378
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLN 363
LR +PD+Q LA ++ RKK+ L+D Y++Y +S LP+L+ L ++ ++ + + L+
Sbjct: 379 DHLRRIPDLQVLAKKLARKKSTLQDLYKIYMCISHLPRLLEQLSNINVIALKTMFSDPLS 438
Query: 364 TILSSLQSLKMM-----------------------------DRKDAVMDKMKEYLESTAR 394
+++ + + M + D V K++ L A
Sbjct: 439 ELITDMDKFQQMVEQTIDLDSAEKGDFLVRAEFDDELKELKNTMDEVEAKLQSQLGKVAN 498
Query: 395 RLNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANT 451
L++ A KT+KLE++ Q G+ +R+T+K + ++ Y ILD+ + GVRF+ ++L N
Sbjct: 499 DLSIEAGKTLKLESNQQLGYYFRVTLKEEKVLRNKKQYIILDSNKSGVRFRSNKLNDLND 558
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
+Y + +Y Q+ +V E+I I+AGY+ T+ + +VLA DVL +F+ + A KPYVR
Sbjct: 559 EYIVARDKYTVEQKKVVTEIIEIAAGYSSTIKAIGNVLASLDVLTAFASVAVSANKPYVR 618
Query: 512 PCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
P M P G L Q RHP +E+Q GV +I ND+ FK GE F ++TGPNMGGKSTYIRS
Sbjct: 619 PEMLPTEAGEFNLTQVRHPCLEIQEGVDFIANDISFKRGECHFRIITGPNMGGKSTYIRS 678
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
GVS +A IG FVPCD A IS++D I RVGA DSQ +G+STFMMEM ETA ++K T
Sbjct: 679 AGVSALMAHIGSFVPCDQARISLLDCILARVGADDSQLKGLSTFMMEMIETAAILKTATC 738
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
NSLV+IDELGRGTST++G G+A SIA LA + + LFATHFHEI L + +N
Sbjct: 739 NSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATHFHEITKLEEEVSAVKNQH 798
Query: 692 VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
V+AL ++ L LLY+VKPG C +S+G+H AKMA +P+D++E A+ E E D+
Sbjct: 799 VTALVDDNKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEFAKRKQAELEDYQDSVFEG 858
Query: 752 GDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSK 785
D +++ ++E E + +F+ +C +L K
Sbjct: 859 SDNPQKKKD----IIKEAEVLIAEFISKCRNLDK 888
>gi|340709839|ref|XP_003393508.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh2-like [Bombus terrestris]
Length = 921
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 340/878 (38%), Positives = 498/878 (56%), Gaps = 103/878 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKDKTLETVL 59
F FF P+K TTIRFFNR ++Y +HG DA Q + K +G + E V+
Sbjct: 19 FVRFFKNLPEKLNTTIRFFNRSDYYTLHGNDALFAAQEVFKTTSVCKMIGAEPYKTEGVI 78
Query: 60 VNKSNLSCFSHILCVI---------------SEDKTLE-------------TVLTNT--- 88
+NK++ F L ++ +++ LE T+ N
Sbjct: 79 LNKNHFESFIRDLLLVKQYRVEVYVNQGSAKNQNWVLEYKGSPGNLTQFEDTLFGNNDVA 138
Query: 89 ------------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
VG++ VD F + E D++ +SNLE+++V +PKECLL
Sbjct: 139 VSVHVIAVKLGMEAKSRIVGLSCVDTTATSFSVCEFQDNESFSNLESLVVTLAPKECLLI 198
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
+ + +++RN V +T RK++EFS E ++QD+N L++F + +N + LPE+
Sbjct: 199 QGEGSYEFQTLKQVMERNNVMVTTRKRSEFSSESVIQDLNTLIKFKKGQQQNVQSLPEVN 258
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS-- 248
L+ A +LI YL+L ++E N+NQF+I I S+Y+ + SA + +L++ + ++S
Sbjct: 259 LSFAMSATSALIKYLDLTSDEGNLNQFAIDQIKESRYLKLDSAAIKALNIESRVDTSSIL 318
Query: 249 -AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S+LGILD+CRT QGHRLLAQW++QPLKDL I ERH V LVN+ E R NL E
Sbjct: 319 NGNAPTSILGILDKCRTSQGHRLLAQWIRQPLKDLCLIKERHDIVETLVNDNELRTNLSE 378
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
LR +PD+Q LA ++ RKK+ L+D Y++Y +S LP+L+ L N+ L T+ S
Sbjct: 379 DHLRRIPDLQVLAKKLARKKSTLQDLYKIYMCISHLPRLLEQL----SNINVIALKTMFS 434
Query: 368 SLQS--LKMMDR-----------------------------------KDAVMDKMKEYLE 390
S +K MD+ D V K++ L
Sbjct: 435 DPLSELIKDMDKFQQMVEQTIDLDSAEKGDFLVRAEFDDELKELKNTMDEVEAKLQSQLG 494
Query: 391 STARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLA 447
A L++ A KT+KLE++ Q G+ +R+T+K + ++ Y ILD+ + GVRF+ ++L
Sbjct: 495 KVANDLSIEAGKTLKLESNQQLGYYFRVTLKEEKVLRNKKQYIILDSNKSGVRFRSNKLN 554
Query: 448 TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPK 507
N +Y + +Y Q+ +V E+I I+AGY+ T+ + +VLA DVL +F+ + A K
Sbjct: 555 DLNDEYIVARDKYTVEQKKVVTEIIEIAAGYSSTIKAIGNVLASLDVLTAFASVAVSANK 614
Query: 508 PYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
PYVRP M P G L Q RHP +E+Q GV +I ND+ FK GE F ++TGPNMGGKST
Sbjct: 615 PYVRPEMLPTEAGEFNLIQVRHPCLEIQEGVDFIANDISFKRGECHFRIITGPNMGGKST 674
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
YIRS GVS +A IG FVPCD A IS++D I RVGA DSQ +G+STFMMEM ETA ++K
Sbjct: 675 YIRSAGVSALMAHIGSFVPCDQARISLLDCILARVGADDSQLKGLSTFMMEMIETAAILK 734
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
T NSLV+IDELGRGTST++G G+A SIA LA + + LFATHFHEI L +
Sbjct: 735 TATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATHFHEITKLEEEVSAV 794
Query: 688 RNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
+N V+AL ++ L LLY+VKPG C +S+G+H AKMA +P+D++E A+ E E D+
Sbjct: 795 KNQHVTALVDDNKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEFAKRKQAELEDYQDS 854
Query: 748 KTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSK 785
D +++ ++E E + +F+ +C +L K
Sbjct: 855 VFEGSDNPQKKKD----IIKEAEVLIAEFISKCRNLDK 888
>gi|307184088|gb|EFN70623.1| DNA mismatch repair protein Msh2 [Camponotus floridanus]
Length = 895
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 339/885 (38%), Positives = 508/885 (57%), Gaps = 105/885 (11%)
Query: 11 KSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKDKTLETVLVNKSNLSCFS 69
K TTIRFFNR ++Y +HG DA Q + K +G + E V++NK + F
Sbjct: 1 KLDTTIRFFNRSDYYTLHGSDALFAAQEVFKTTSVCKMIGAEPHKTEGVILNKGHFETFV 60
Query: 70 HILCVISEDKT---------------------------LETVL----------------- 85
L ++ + + E +L
Sbjct: 61 RDLLLVKQYRVEVYVNQGSSKNQNWVLEHKGSPGNLSHFEDILFGNNDIAVGVSVIAVKL 120
Query: 86 -----TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNK 140
+ VG++ VD+ + +GE D++ +SNLE++IV +PKECLL +
Sbjct: 121 GTEGKSRVVGLSCVDVVSTLILVGEFQDNESFSNLESLIVTLAPKECLLIQGEGSYEFQT 180
Query: 141 IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
+ +++RN V +T RK+NEFS + ++ D+N L++F + +NA+ LPE+ L A +
Sbjct: 181 LKQLIERNNVMVTLRKRNEFSSDSIIDDLNTLIKFKKGQKQNAQSLPEVNLNLAMSATSA 240
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS---AQTYDSLLG 257
LI YL+L ++E +MNQFS+ ++ S+Y+ + SA + +L++ PQ S S+L
Sbjct: 241 LIKYLDLTSDEGHMNQFSLKQVEQSRYIRLDSAAIKALNIEPQIDGVSNLHGNPAASVLT 300
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+CRT QGHRL+AQW++QPL+DL I ERH V +LVNN E R L++ L+ +PD+Q
Sbjct: 301 LLDKCRTAQGHRLIAQWVRQPLRDLSLIKERHDIVELLVNNNELRSILNDDYLKRIPDLQ 360
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNT-ILSSLQSL---- 372
LA ++ RKK+ L+DCY++Y VS LPKL LE L+ + L I+ L+ L
Sbjct: 361 QLAKKLARKKSALQDCYKIYLCVSYLPKL---LEQLLPEANMTALKAMIIDPLKELIEDM 417
Query: 373 --------------------------------KMMDRKDAVMDKMKEYLESTARRLNLVA 400
++ D D ++++ L A L + A
Sbjct: 418 DKFQQLVEQTIDLDAAEKGDFMVNPGFADDFKELKDAMDETEERIQRQLGKAADDLGMEA 477
Query: 401 DKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
KT+KLE++ Q G+ +RIT+K + + RYTILD+ + GVRF++ +L+ N ++ +
Sbjct: 478 GKTLKLESNQQLGYYFRITLKEEKILRNNKRYTILDSNKAGVRFRNSKLSELNDEFIVAR 537
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+Y Q+ ++ E++GI+AGY++T+ + VLA DVL +F+ A+ A K YVRP M P
Sbjct: 538 NKYLERQKDVITEIMGIAAGYSETVRTIGGVLACLDVLTAFASAAISANKVYVRPEMVPS 597
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
G L L Q RHP +E+Q GV YI ND+ FK + F ++TGPNMGGKSTYIRS+GV+
Sbjct: 598 EEGELNLIQVRHPCLEMQQGVDYIANDINFKRDQYHFCIITGPNMGGKSTYIRSVGVAAL 657
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+A IG FVPCD ATIS++D I R+GA DSQ +G+STFM EM ETA ++K T NSLVII
Sbjct: 658 MAHIGSFVPCDKATISLLDCILARIGADDSQLKGLSTFMTEMIETAAILKTATCNSLVII 717
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DELGRGTST++G G+A SIA LA + + LFATHFHEI L+ +PT +N V+AL +
Sbjct: 718 DELGRGTSTYEGCGIAWSIAEHLAKDIRSYCLFATHFHEITRLAEEVPTIQNHHVTALVE 777
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
++ L LLY VKPG C +S+G+H AKMA +P D++E A+ E E D ++ + +NN
Sbjct: 778 DNKLTLLYTVKPGICDQSFGLHVAKMANFPPDVIEFAKRKQAELE---DYQSVVFEGSNN 834
Query: 758 REEEYFKTVQEGEYQMFDFLQQC--LSLSKQKDT---NRILHLQE 797
++ K +QE E + F ++C L+L+ D N++L +E
Sbjct: 835 SHKKR-KIIQEAETLISQFFKKCKTLALTSLSDADLENKVLVFKE 878
>gi|326914909|ref|XP_003203765.1| PREDICTED: DNA mismatch repair protein Msh2-like [Meleagris
gallopavo]
Length = 873
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 309/737 (41%), Positives = 446/737 (60%), Gaps = 46/737 (6%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
+GV VD +K + E PD+D +SNLEA++VQ PKEC+LP K+ ++ R
Sbjct: 101 IGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGDTAGEMGKLRQVIQRG 160
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RKK +F+ +D++QD+NRL++ E N+ LPEM A L ++I +LEL+
Sbjct: 161 GILITDRKKADFTTKDIVQDLNRLLKSRKGEQMNSAALPEMEKQVAVSSLSAVIKFLELL 220
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+++ N QF + + D S+Y+ + +A + +L++ Q +A SL G+L++CRTPQG
Sbjct: 221 SDDSNFGQFELTTFDLSQYMVLDNAAVQALNLF-QSSVENANNTQSLAGLLNKCRTPQGQ 279
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RL+ QW+KQPL D + I ER V V +TE R L E LR PD+ LA R R+ A
Sbjct: 280 RLVNQWIKQPLMDKNRIEERLNLVEAFVEDTELRQGLQEDLLRRFPDLNRLAKRFQRQAA 339
Query: 329 GLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSLKMMDRKDAV 381
L+DCYR+Y+ ++QLP ++ LE L+ V + LN I S M
Sbjct: 340 TLQDCYRMYQAINQLPNVVQALEKHEGAHQMLLLAVFITPLNDIHSDFSKFLEMIETTLD 399
Query: 382 MDK-----------------------------MKEYLESTARRLNLVADKTIKLENSPQ- 411
MDK M+ L+S A+ L L A K+IKLE++ Q
Sbjct: 400 MDKVENHEFLVKASFDPNLTELREKMNELEENMQTLLKSAAKELGLEAGKSIKLESNSQF 459
Query: 412 GFAYRITMK-----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G +RIT K NNS +Y I DT + GV+F + +L+ N Y + EYE Q +
Sbjct: 460 GHHFRITCKEEKVLRNNS---KYKITDTQKNGVKFTNSKLSAINEDYIKNREEYEEAQDA 516
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
IV+E+I I++GY + + ++DV+AQ D +VSF+ S AP PYVRP + G G +VL
Sbjct: 517 IVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVVLEKGQGRIVLKG 576
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q V++IPNDV F+ G+ F+++TGPNMGGKSTYIR GV V +AQIGCFVP
Sbjct: 577 ARHPCIEVQDEVAFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVP 636
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
CDSA I++VD I RVGA DSQ +G+STFM EM ETA++++ +ENSL+IIDELGRGTST
Sbjct: 637 CDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTST 696
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQ 706
+DGFG+A +I+ +AS F +FATHFHE+ L+ +PT N+ V+AL +D L +LY+
Sbjct: 697 YDGFGLAWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYR 756
Query: 707 VKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTV 766
VK G C +S+G+H A++A +P+ ++E AR+ E E D P E ++ ++
Sbjct: 757 VKAGVCDQSFGIHVAELAAFPKHVIENAREKALELEEFQDLGRPKESEGEPAAKKCYRER 816
Query: 767 QEGEYQMFDFLQQCLSL 783
+EGE + DFL Q +L
Sbjct: 817 EEGEKIIQDFLCQVKAL 833
>gi|449275266|gb|EMC84169.1| DNA mismatch repair protein Msh2, partial [Columba livia]
Length = 863
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 309/765 (40%), Positives = 465/765 (60%), Gaps = 48/765 (6%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
VGV VD +K + E PD+D +SNLEA++VQ PKEC+LP K+ ++ R
Sbjct: 91 VGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRG 150
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RKK +F+ +D++QD+NRL++ E N+ LPEM A L ++I +LEL+
Sbjct: 151 GILITDRKKADFTTKDIVQDLNRLLKSKKEEQINSAALPEMEKQVAVSSLSAIIKFLELL 210
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
++E N QF + + D S+Y+ + +A + +L++ Q +A T SL G+L++CRTPQG
Sbjct: 211 SDESNFGQFELTTFDLSQYMVLDNAAVQALNLF-QSSVENANTAQSLAGLLNKCRTPQGQ 269
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RL+ QW+KQPL D + I ER V V + E R L E LR PD+ LA + R+ A
Sbjct: 270 RLVNQWIKQPLMDKNRIEERLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAA 329
Query: 329 GLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSL--------- 372
L+DCYR+Y+ ++QLP ++ LE L+ V + LN I S
Sbjct: 330 TLQDCYRMYQAINQLPNVVQALEKHEGAHQMLLLAVFITPLNDIFSDFSKFLEMIETTLD 389
Query: 373 --------------------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQ 411
++ ++ + + +KM+ YL+S A+ L L A K+IKLE NS
Sbjct: 390 MDKVENHEFLVKASFDPNLTELREKMNELEEKMQSYLKSAAKELGLEAGKSIKLETNSQF 449
Query: 412 GFAYRITMK-----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G +RIT K NNS +Y I+DT + GV+F + +L++ N +Y + EYE Q +
Sbjct: 450 GHHFRITCKEEKVLRNNS---KYGIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDA 506
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
IV+E+I I++GY + + ++DV+AQ D +VSF+ S AP PYVRP + G G +VL
Sbjct: 507 IVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILDKGQGRIVLKG 566
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP VE+Q V++IPNDV F+ G+ F+++TGPNMGGKSTYIR GV V +AQIGCFVP
Sbjct: 567 ARHPCVEVQDEVAFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVP 626
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C+SA +++VD I RVGA DSQ +G+STFM EM ETA++++ +ENSL+IIDELGRGTST
Sbjct: 627 CESAEVTIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTST 686
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQ 706
+DGFG+A +I+ +AS F +FATHFHE+ L+ +PT N+ V+AL +D L +LY+
Sbjct: 687 YDGFGLAWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYR 746
Query: 707 VKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTV 766
VK G C +S+G+H A++A +P+ ++E AR+ E E + + +++++
Sbjct: 747 VKEGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKESDGEPPAKKFYRER 806
Query: 767 QEGEYQMFDFLQQ--CLSLSKQKDTNRILHLQETQEPGIEEYQSF 809
+EGE + +FL Q L L+ + + + L+E + + + SF
Sbjct: 807 EEGEKIIQEFLCQVKALPLTDMSEEDIKMKLKELRSDVLAKNNSF 851
>gi|449496456|ref|XP_002195963.2| PREDICTED: DNA mismatch repair protein Msh2 [Taeniopygia guttata]
Length = 864
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/734 (40%), Positives = 451/734 (61%), Gaps = 40/734 (5%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
VGV VD +K + E PD+D +SNLEA++VQ PKEC+LP K+ ++ R
Sbjct: 92 VGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRG 151
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RKK +F+ +D++QD+NRL++ E N+ LPEM A L ++I +LEL+
Sbjct: 152 GILITDRKKADFTTKDIVQDLNRLLKQKKEEQLNSAALPEMEKQVAVSSLSAVIKFLELL 211
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
++E N QF + + D S+Y+ + +A + +L++ Q +A T SL G+L++CRTPQG
Sbjct: 212 SDESNFGQFELTTFDLSQYMVLDNAAVQALNLF-QSSVENANTAQSLAGLLNKCRTPQGQ 270
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RL+ QW+KQPL D I ER V V + E R L E LR PD+ LA + R+ A
Sbjct: 271 RLVNQWIKQPLMDKTRIEERLNLVEAFVMDPELRQCLQEDLLRRFPDLNRLAKKFQRQAA 330
Query: 329 GLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSL--------- 372
L+DCYR+++ ++QLP ++ LE L+ V + LN I S
Sbjct: 331 NLQDCYRMFQAINQLPNVVQALEKHEGAHQMLLLAVFITPLNDICSDFSKFLEMIETTLD 390
Query: 373 --------------------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQ- 411
++ ++ + + +KM+ L++ A+ L L A K+IKLE++ Q
Sbjct: 391 MEKVENHEFLVKASFDPNLTELREKMNELEEKMQSLLKTAAKELGLEAGKSIKLESNSQF 450
Query: 412 GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G +R+T K ++ + +Y I+DT + GV+F + +L+T N +Y + EYE Q +IV+
Sbjct: 451 GHHFRVTCKEEKALRNNSKYGIIDTQKNGVKFTNSKLSTINEEYIRNREEYEEAQDAIVK 510
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRH 529
E+I I++GY + + ++DV+AQ D +VSF+ S AP PYVRP + G G +VL RH
Sbjct: 511 EIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVVLEKGQGRIVLKGARH 570
Query: 530 PIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
P +E+Q V++IPND+ F+ G+ F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+S
Sbjct: 571 PCIEVQDEVAFIPNDITFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCES 630
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A I++VD I RVGA DSQ +G+STFM EM ETA++++ TENSL+IIDELGRGTST+DG
Sbjct: 631 AEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTATENSLIIIDELGRGTSTYDG 690
Query: 650 FGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
FG+A +I+ +AS F +FATHFHE+ L+ +PT N+ V+AL +D L +LY+VK
Sbjct: 691 FGLAWAISEYIASKICGFAMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKE 750
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEG 769
G C +S+G+H A++A +P+ ++E AR+ E E + E ++ ++ +EG
Sbjct: 751 GVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKESEGEPPVKKLYREREEG 810
Query: 770 EYQMFDFLQQCLSL 783
E + DFL Q +L
Sbjct: 811 EKIIQDFLCQVKAL 824
>gi|363731309|ref|XP_426110.3| PREDICTED: DNA mismatch repair protein Msh2 [Gallus gallus]
Length = 907
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 305/736 (41%), Positives = 447/736 (60%), Gaps = 44/736 (5%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
+GV VD +K + E PD+D +SNLEA++VQ PKEC+LP K+ ++ R
Sbjct: 135 IGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGDTAGEMGKLRQVVQRG 194
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RKK +F+ +D++QD+NRL++ E N+ LPEM A L ++I +LEL+
Sbjct: 195 GILITDRKKADFTTKDIVQDLNRLLKSRKGEQMNSAALPEMEKQVAVSSLSAVIKFLELL 254
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+++ N Q+ + + D S+Y+ + +A + +L++ Q +A SL G+L++CRTPQG
Sbjct: 255 SDDSNFGQYELTTFDLSQYMVLDNAAVQALNLF-QSSVENANNTQSLAGLLNKCRTPQGQ 313
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RL+ QW+KQPL D + I ER V V +TE R L E LR PD+ LA + R+ A
Sbjct: 314 RLVNQWIKQPLMDKNRIEERLNLVEAFVVDTELRQGLQEDLLRRFPDLNRLAKKFQRQAA 373
Query: 329 GLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSLKMMDRKDAV 381
L+DCYR+Y+ ++QLP ++ LE L+ V + LN I S M
Sbjct: 374 TLQDCYRMYQAINQLPNVVQALEKHEGAHQMLLLAVFITPLNDIHSDFSKFLEMIETTLD 433
Query: 382 MDK-----------------------------MKEYLESTARRLNLVADKTIKLENSPQ- 411
MDK M+ L+S A+ L L A K+IKLE++ Q
Sbjct: 434 MDKVENHEFLVKASFDPNLTELREKMNELEESMQTLLKSAAKELGLEAGKSIKLESNSQF 493
Query: 412 GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSI 467
G +RIT K L N++ +Y I DT + GV+F + +L+ N +Y + EYE Q +I
Sbjct: 494 GHHFRITCKEEKVLRNNM--KYKITDTQKNGVKFTNSKLSAINEEYIKNREEYEEAQDAI 551
Query: 468 VEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQC 527
V+E+I I++GY + + ++DV+AQ D +VSF+ S AP PYVRP + G G +VL
Sbjct: 552 VKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGA 611
Query: 528 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
RHP +E+Q V++IPNDV F+ G+ F+++TGPNMGGKSTYIR GV V +AQIGCFVPC
Sbjct: 612 RHPCIEVQDEVAFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPC 671
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
+SA I++VD I RVGA DSQ +G+STFM EM ETA++++ +ENSL+IIDELGRGTST+
Sbjct: 672 NSAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTY 731
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DGFG+A +I+ +AS F +FATHFHE+ L+ +PT N+ V+AL +D L +LY+V
Sbjct: 732 DGFGLAWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRV 791
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQ 767
K G C +S+G+H A++A +P+ ++E AR+ E E D P E + ++ +
Sbjct: 792 KAGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQDIGRPKESEGEPAAKRCYRERE 851
Query: 768 EGEYQMFDFLQQCLSL 783
EGE + DFL Q +L
Sbjct: 852 EGEKIIQDFLSQVKAL 867
>gi|383861845|ref|XP_003706395.1| PREDICTED: DNA mismatch repair protein Msh2-like [Megachile
rotundata]
Length = 920
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 340/876 (38%), Positives = 497/876 (56%), Gaps = 104/876 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKDKTLETVL 59
F FF P+K TTIRFFNR ++Y +HG DA Q + K +G E V+
Sbjct: 19 FVRFFKNLPEKLNTTIRFFNRSDYYTLHGSDALFAAQEVFKTTAVCKMIGADPYKTEGVI 78
Query: 60 VNKSNLSCFSHILCVISEDKT---------------------------LETVL------- 85
+NK++ F L ++ + + E VL
Sbjct: 79 LNKNHFEAFIRDLLLVKQYRIEVYVNQGSSKNQNWVLEFTGSPGNLSQFEDVLFGNNDIA 138
Query: 86 ---------------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
+ VG++ VD F + E D++ +SNLE++IV +PKECLL
Sbjct: 139 VSVRVIAVKLGMDGKSRVVGLSCVDTTATSFSVCEFQDNESFSNLESLIVTLAPKECLLI 198
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
+ + +++RN V +T +KKNEFS E ++QD+N L++F + N + LPE+
Sbjct: 199 QGEGSYEFQTLKQLMERNNVMITLKKKNEFSSESVVQDLNTLIKFAKGQQPNVQSLPEIN 258
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS-- 248
L A +LI YL+L ++E N+NQF + I+ S+Y+ + +A + +L++ P+ + S
Sbjct: 259 LNFAMSATAALIKYLDLTSDEGNLNQFILDQIEQSRYLKLDAAAIKALNIEPRVDTLSIL 318
Query: 249 -AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S+L +LD+CRT QGHRLLAQW++QPLKDL I ERH V LVN+ E R NL E
Sbjct: 319 SGNAPTSILTLLDKCRTAQGHRLLAQWVRQPLKDLSLIKERHDIVEALVNDNELRSNLSE 378
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
LR +PD+Q LA ++ RKKA L+DCY++Y + LP+LI N+ L T+ S
Sbjct: 379 DHLRRIPDLQVLAKKLARKKATLQDCYKIYMCMLHLPRLIEQF----SNINVVALKTVFS 434
Query: 368 S--LQSLKMMDRK----------DAV---------------------MDKMKEYLES--- 391
+ + +K MD+ DA MD+M++ L++
Sbjct: 435 NPLTELIKDMDKYQQMVEQTIDLDAAEKGDFLVRSEFDEELKELKNTMDEMEKKLQAQLS 494
Query: 392 -TARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLA 447
A L++ A KT+KLE++ Q G+ +R+T+K + ++ YTILD+ + GVRF+ +RL+
Sbjct: 495 KVADDLSIDAGKTLKLESNQQFGYYFRVTLKEEKVLRNKKQYTILDSNKSGVRFRSNRLS 554
Query: 448 TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPK 507
N +Y A + +Y T Q+ +V E+I I+AGY+ + + ++LA DVL +F+ A+ A K
Sbjct: 555 DLNDEYIATRDKYTTEQKKVVSEIIEIAAGYSSPVKNIGNILACLDVLTAFASAAVSANK 614
Query: 508 PYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
PY+RP M P G L Q RHP +E G+ YI NDV FK E F ++TGPNMGGKST
Sbjct: 615 PYIRPQMLPSEAGEFNLVQVRHPCLENLEGMDYIANDVNFKR-EYHFCIITGPNMGGKST 673
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
YIRS GV+ LA IG FVPCD A IS++D I RVGA DSQ +G+STFMMEM ETA ++K
Sbjct: 674 YIRSAGVTALLAHIGSFVPCDEAKISLLDCILARVGADDSQLKGLSTFMMEMIETAAILK 733
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
T NSLV+IDELGRGTST++G G+A SIA LA + + LFATHFHEI L +
Sbjct: 734 TATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATHFHEITKLEEEVSAV 793
Query: 688 RNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
+N V+AL ++ L LLY+VKPG C +S+G+H AKMA +P++++E A+ E E +
Sbjct: 794 KNQHVTALVDDNKLTLLYKVKPGICDQSFGIHVAKMANFPQNVIEFAKRKQAELEDYQHS 853
Query: 748 KTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSL 783
D+ ++ K ++E E + +FL +C +L
Sbjct: 854 TFKGSDDPQKKQ----KIIKEAEVLIAEFLNKCKNL 885
>gi|34330121|dbj|BAC82442.1| hypothetical protein [Gallus gallus]
Length = 861
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/734 (41%), Positives = 444/734 (60%), Gaps = 40/734 (5%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
+GV VD +K + E PD+D +SNLEA++VQ PKEC+LP K+ ++ R
Sbjct: 89 IGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGDTAGEMGKLRQVVQRG 148
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RKK +F+ +D++QD+NRL++ E N+ LPEM A L ++I +LEL+
Sbjct: 149 GILITDRKKADFTTKDIVQDLNRLLKSRKGEQMNSAALPEMEKQVAVSSLSAVIKFLELL 208
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+++ N Q+ + + D S+Y+ + +A + +L++ Q +A SL G+L++CRTPQG
Sbjct: 209 SDDSNFGQYELTTFDLSQYMVLDNAAVQALNLF-QSSVENANNTQSLAGLLNKCRTPQGQ 267
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RL+ QW+KQPL D + I ER V V +TE R L E LR PD+ LA + R+ A
Sbjct: 268 RLVNQWIKQPLMDKNRIEERLNLVEAFVVDTELRQGLQEDLLRRFPDLNRLAKKFQRQAA 327
Query: 329 GLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSLKMMDRKDAV 381
L+DCYR+Y+ ++QLP ++ LE L+ + LN I S M
Sbjct: 328 TLQDCYRMYQAINQLPNVVQALEKHEGAHQMLLLAGFITPLNDIHSDFSKFLEMIETTVD 387
Query: 382 MDK-----------------------------MKEYLESTARRLNLVADKTIKLENSPQ- 411
MDK M+ L+S A+ L L A K+IKLE++ Q
Sbjct: 388 MDKVENHEFLVKASFDPNLTELREKMNELEESMQTLLKSAAKELGLEAGKSIKLESNSQF 447
Query: 412 GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G +RIT K + + ++ I DT + GV+F + +L+ N +Y + EYE Q +IV+
Sbjct: 448 GHHFRITCKEEKVLRNNTKFKITDTQKNGVKFTNSKLSAINEEYIKNREEYEEAQDAIVK 507
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRH 529
E+I I++GY + + ++DV+AQ D +VSF+ S AP PYVRP + G G +VL RH
Sbjct: 508 EIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVVLEKGQGRIVLKGARH 567
Query: 530 PIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
P +E+Q V++IPNDV F+ G+ F+++TGPNMGGKSTYIR GV V +AQIGCFVPCDS
Sbjct: 568 PCIEVQDEVAFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDS 627
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A I++VD I RVGA DSQ +G+STFM EM ETA++++ +ENSL+IIDELGRGTST+DG
Sbjct: 628 AEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDG 687
Query: 650 FGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
FG+A +I+ +AS F +FATHFHE+ L+ +PT N+ V+AL +D L +LY+VK
Sbjct: 688 FGLAWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKA 747
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEG 769
G C +S+G+H A++A +P+ ++E AR+ E E D P E + ++ +EG
Sbjct: 748 GVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQDIGRPKESEGEPAAKRCYREREEG 807
Query: 770 EYQMFDFLQQCLSL 783
E + DFL Q +L
Sbjct: 808 EKIIQDFLSQVKAL 821
>gi|417405309|gb|JAA49370.1| Putative mismatch repair msh3 [Desmodus rotundus]
Length = 933
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 333/873 (38%), Positives = 494/873 (56%), Gaps = 98/873 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY H EDA L R+ ++K MG KTLE+V
Sbjct: 19 FVRFFQSMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVIKYMGPAGAKTLESV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVQQYRVEVYKNRAGNKASKENDWYLAFKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
S+ + V +TV G+ VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDASDSIGVVGVKMSTVDGQRQVGIGYVDSVQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + + K+ I+ R + +T RK+ +FS D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGEIAGDMGKLRQIIQRGGILITERKRTDFSTRDIYQDLNRLLKGKKGEQVNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R +L
Sbjct: 317 VEDTTGAQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE SL+ V
Sbjct: 377 QEDLLRRFPDLNRLARKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQSLLLAVF 436
Query: 359 AS---NLNTILSSLQSL--------------------------KMMDRKDAVMDKMKEYL 389
+ +L + S Q + ++ + D + KM+ L
Sbjct: 437 VTPFIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
STAR L L + K IKL++S Q G+ +R+T K + + ++ +D + GV+F + L
Sbjct: 497 ISTARDLGLESGKQIKLDSSSQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSAL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E+I IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQNAIVKEIINISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL ED L +LYQVK G C +S+G+H A++A +P ++E A+ E E +
Sbjct: 797 VNNLHVTALTTEDTLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQN 856
Query: 747 TKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQ 779
DE + + +EGE + +FL +
Sbjct: 857 IGESQDDEMEPAAKRCYLEREEGEKIIQEFLSK 889
>gi|1079288|pir||S53609 DNA mismatch repair protein MSH2 - African clawed frog
Length = 933
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 318/841 (37%), Positives = 489/841 (58%), Gaps = 104/841 (12%)
Query: 4 YLFFF---PQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTLET 57
+L F+ P+K TT+R F+R ++Y VHG DA + K+N V +K +G +K LE+
Sbjct: 19 FLHFYQSMPEKPDTTVRVFDRNDYYTVHGGDALFAAKEVFKTNGV--IKYLGSGNKKLES 76
Query: 58 VLVNK-------------------------------------------SNLSCFSHILCV 74
V+++K NL+ F IL
Sbjct: 77 VVLSKMNFESVVKDLLLVRQYRVEVYKNKSGGKYSKENDWQLAFKASPGNLTQFEEILFG 136
Query: 75 ISEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPK 125
++ T V+ VGV VD +K + E PD+D +SNLEA++VQ PK
Sbjct: 137 NNDMSTAVGVVGIKLVSSEGQRLVGVGYVDSTLRKLGVCEFPDNDQFSNLEALLVQIGPK 196
Query: 126 ECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL 185
EC++P + K+ I+ R + +T RK+ EFS +D +QD+NRL++ E +
Sbjct: 197 ECVMPGGETAGDMGKLRQIVKRGGILITDRKRAEFSTKDSVQDLNRLLKAKKGEQVTSAA 256
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG 245
LPEM A L +++ YLEL+++E N QF + + D S+Y+ + +A + +L++ P
Sbjct: 257 LPEMEKQVAMSALAAVMKYLELLSDESNFGQFVMTNFDLSQYMKLDNAAVGALNLFPGSA 316
Query: 246 STSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
++ T SL G+L++C+TPQG RL+ QW+KQPL D + + ER V V + E R L
Sbjct: 317 EDTSGT-QSLAGLLNKCKTPQGQRLVNQWIKQPLMDKNRVEERLNLVEAFVMDVELRQCL 375
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+ V+ LP ++ +E L+ V
Sbjct: 376 QEDLLRRFPDLNRLAKKFQRQTANLQDCYRLYQAVNHLPTVVQAIEKYEGTHQMLLLAVF 435
Query: 359 A---SNLNTILSSLQSL--------------------------KMMDRKDAVMDKMKEYL 389
A S+L++ S Q + ++ ++ D + M+ L
Sbjct: 436 ATPLSDLSSDFSKFQEMIETTLDMDQVENHEFLVKASFDPNLTELREKMDELEKNMQGAL 495
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
AR L L A K+IKLE++ Q G +R+T K ++ + ++T +D + GVRF + +L
Sbjct: 496 GGAARELGLDAGKSIKLESNSQIGHYFRVTCKEEKALRNNKKFTTIDIQKNGVRFTNSKL 555
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ + +Y + EYE Q +IV+E+I ISAGY + L+DV+AQ D +VSF+ S AP
Sbjct: 556 SSLSEEYMRNREEYEEAQNAIVKEIITISAGYVDPIQTLNDVIAQLDAVVSFAHVSNSAP 615
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G +VL+ RHP +E+Q V++IPND+ F+ + F+++TGPNMGGKS
Sbjct: 616 VPYVRPVILEKGQGRIVLHSARHPCIEMQDDVAFIPNDITFEKEKQMFHIITGPNMGGKS 675
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPCDSA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 676 TYIRQTGVIVLMAQIGCFVPCDSAQVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 735
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ TENSL+IIDELGRGTST+DGFG+A +I+ +++ + F +FATHFHE+ L+ +PT
Sbjct: 736 RSATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIKAFCMFATHFHELTALADQVPT 795
Query: 687 FRNVQVSALEQEDNLV-LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYE 742
N+ V+AL ED L+ +LY++K G C +S+G+H A++A +P+ ++E A++ ++E++
Sbjct: 796 VNNLHVTALTTEDTLITMLYRIKKGVCDQSFGIHVAELANFPKHVIETAKEKALELEEFQ 855
Query: 743 Y 743
Y
Sbjct: 856 Y 856
>gi|410927598|ref|XP_003977228.1| PREDICTED: DNA mismatch repair protein Msh2-like [Takifugu
rubripes]
Length = 937
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 326/877 (37%), Positives = 485/877 (55%), Gaps = 100/877 (11%)
Query: 4 YLFFFPQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTLETVLV 60
++F P K TT R F+R +FY VHG+DA R K+N V +K +G + LE+V++
Sbjct: 22 FVFSLPDKPDTTFRVFDRSDFYTVHGKDAIYAAREVFKTNGV--IKYLGSGSRRLESVVL 79
Query: 61 NKSNLSCFSHILCVISEDKT----------------------------LETVLTNT---- 88
+K N + L ++ + + E VL +
Sbjct: 80 SKLNFEALARDLLLVRQYRVEVYKNHGKGSKDHDWRVEYKASPGNLTQFEEVLFGSGSGS 139
Query: 89 --------------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL 128
VGV VD + + E PD++ +SNLEA++VQ SPKECL
Sbjct: 140 EACAGVVAVRFAAGADGQRVVGVGYVDAAQRTMGVCEFPDNEIFSNLEALLVQISPKECL 199
Query: 129 LPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE 188
L + +K+ ++ R ++ RKK EF +DL+QD+NRL+R + ++R LPE
Sbjct: 200 LAQGDGGADGSKLREVVQRGGALVSERKKAEFHSKDLVQDLNRLLRAKKGQSVSSRTLPE 259
Query: 189 MCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS 248
+ A CL +++ +LEL+++E N FS+ S+D S+Y+ + +A + +L++ S
Sbjct: 260 LDKQVAVSCLAAVVRFLELLSDESNFGSFSLTSLDLSQYMRLDNAAVRALNLFQGSPDDS 319
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
A T+ SL G+L++CRTPQG RLL QW+KQPL D I ER V LV ++E R E
Sbjct: 320 AGTH-SLAGLLNKCRTPQGQRLLQQWIKQPLLDRTRIEERLDLVESLVGDSELRQTCQED 378
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSS 368
LR PD+ L+ + R A L+DCYRVY+ V + L+S L+ +A +S
Sbjct: 379 LLRRFPDLHRLSRKFQRHSATLQDCYRVYQAVHHVAALLSALDRHAGRHQALMDAVFISP 438
Query: 369 LQSLK------------------------------------MMDRKDAVMDKMKEYLEST 392
L+ L+ + + D + M+ L S
Sbjct: 439 LRDLQSDFGKYQEMIETTLDMNQVEHHEFLIKASFDPALSDLRSKMDEMEKSMQAVLSSA 498
Query: 393 ARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATA 449
AR L L A KT+KLE N+ GF R+T K + + ++T+LD + GVRF + +L++
Sbjct: 499 ARELGLDAGKTVKLESNAALGFYLRVTCKEEKVLRNNKKFTMLDVQKNGVRFTNGKLSSI 558
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
N Y + EYE Q +IV+E+I I+AGY L LSDV AQ D +VSF++AS AP PY
Sbjct: 559 NEDYTKSRAEYEEAQNAIVKEIINIAAGYVDPLQALSDVTAQLDAVVSFAVASVSAPVPY 618
Query: 510 VRPCM--KPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
VRP + + G + L Q RHP +E ++IPND+ F G+ SF ++TGPNMGGKST
Sbjct: 619 VRPELLGEEGGPRRVALLQARHPCMEADADTAFIPNDITFVQGQKSFYIITGPNMGGKST 678
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
+IR +GV +AQIGCFVPC+ A +SV+D I RVGA DSQ +G+STFM EM ETA +++
Sbjct: 679 FIRQVGVIALMAQIGCFVPCERAELSVIDSILARVGAGDSQVKGVSTFMAEMLETAAILR 738
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
T NSL+IIDELGRGTST+DGFG+A +I++ +A+ + F LFA+HFHE+ L+ PT
Sbjct: 739 SATANSLIIIDELGRGTSTYDGFGLAWAISQHIAAAIRCFCLFASHFHELTALAAQQPTV 798
Query: 688 RNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
N+ V+AL ++ L +LY+V+PG C +S+G+H A++A +P ++ A+D +E E +
Sbjct: 799 HNLHVTALTSQNTLTMLYRVRPGVCDQSFGIHVAELASFPPAVVAMAKDKAEELEEFQEA 858
Query: 748 KTPSGDETNNREEEYFK-TVQEGEYQMFDFLQQCLSL 783
++ E + + Q GE + DFL + SL
Sbjct: 859 AGGKWEQEEGGEAKRRRLDKQVGEKLIQDFLDKARSL 895
>gi|327262719|ref|XP_003216171.1| PREDICTED: DNA mismatch repair protein Msh2-like [Anolis
carolinensis]
Length = 953
Score = 577 bits (1487), Expect = e-161, Method: Compositional matrix adjust.
Identities = 327/874 (37%), Positives = 495/874 (56%), Gaps = 102/874 (11%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLVNKSNLS 66
P+K TTIRFF R ++Y VHG DA L + +++ +G+ +TL++V ++KSN
Sbjct: 44 LPEKPSTTIRFFERGDYYTVHGTDAFLAASEVFKTRGVIRALGKGPRTLDSVALSKSNFE 103
Query: 67 CFSHILCVISEDKT------------------------------LETVL----------- 85
F L ++ + + E VL
Sbjct: 104 SFLRDLLLVRQYRAEVYKNKAGNKSTKESEWYLAYKGSPGNIAQFEDVLFGNHDISSSVG 163
Query: 86 -----------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
VGV VD +K + E D++ +SNLEA++VQ PKECLLP
Sbjct: 164 VMGIKLLSADGQKVVGVGFVDTLMRKLEVCEFVDNEQFSNLEALLVQMGPKECLLPMGEN 223
Query: 135 NDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTA 194
+ K+ + R + +T +KK++F +D+ QD+NRL+R E ++ LPEM A
Sbjct: 224 GADMEKLRQSIQRGGILITNKKKSDFLPKDITQDLNRLLRSKKKEHVSSAALPEMDKQVA 283
Query: 195 THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS 254
L + I YLEL+N++ N QF + + D ++Y+ + A +L++ P S + Q+ S
Sbjct: 284 ISSLAAAIKYLELLNDDSNFGQFELSTFDLNQYMTLDHAAARALNLFPGS-SGNTQSTQS 342
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
L G+L++C+TPQG RL+ QW+KQPL D + I ER V V + E R +L E LR P
Sbjct: 343 LSGLLNKCKTPQGQRLVNQWIKQPLMDKNKIEERLNLVEAFVEDAELRQSLQEDILRRFP 402
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL-------ESLVQNVEASNLNTILS 367
D +A + +KKA L+DCY++Y+ V+Q+P +I +L + L++ V L + S
Sbjct: 403 DFSRIAKKF-QKKATLQDCYKIYQSVNQIPNVIHVLGKTDGNHDMLLEAVFIRPLKELHS 461
Query: 368 SLQSLKMMDRK-----------------------------DAVMDKMKEYLESTARRLNL 398
+ +MM + D + +KM+ L++ A L+L
Sbjct: 462 DFSNFQMMIEETLDMNTVENHEYLVKPSIDPNLAGIRKVMDKLEEKMRGALKTAASELSL 521
Query: 399 VADKTIKLE-NSPQGFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQY 453
A K+IKLE N+ G +RIT + L N++ +Y +L+T + GV+F + L N +Y
Sbjct: 522 EAGKSIKLECNAQYGHHFRITYREEKVLRNNL--KYKVLETQKNGVKFSNIALKDLNEEY 579
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPC 513
++EYE Q +V+E+I +++GY + + +L+DV+AQ D +VSF+ AS AP PYVRP
Sbjct: 580 IKNRKEYEEMQDVVVKEIINVASGYKEPIQRLNDVIAQLDAVVSFAQASNAAPMPYVRPT 639
Query: 514 MKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
+ G G +VL RHP +E+Q VS+IPNDV F+ G+ F+++TGPNMGGKSTYIR G
Sbjct: 640 ILEKGEGGIVLKAARHPCIEVQDDVSFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQAG 699
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
V V +AQIGCFVPCDSA I++VD I RVGA DSQ +G+STFM EM ET+++++ TENS
Sbjct: 700 VIVLMAQIGCFVPCDSADITIVDCILARVGAGDSQLKGVSTFMAEMLETSSILRTATENS 759
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVS 693
L+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L IPT N+ V+
Sbjct: 760 LIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALDEEIPTVNNLHVT 819
Query: 694 ALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
AL +D L +LY+VK G C +S+G+H A++A +P+ ++E A+ E E P G
Sbjct: 820 ALTTDDTLTMLYRVKKGVCDQSFGIHVAELAAFPKHVIENAKAKALELEEFQSIGNPEGK 879
Query: 754 ETNNREE----EYFKTVQEGEYQMFDFLQQCLSL 783
E + E + ++ +EGE + DFL + ++
Sbjct: 880 EEDGDGEPAAKKCYREKEEGEKIIQDFLTKVKAM 913
>gi|432923891|ref|XP_004080503.1| PREDICTED: DNA mismatch repair protein Msh2-like [Oryzias latipes]
Length = 934
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 340/886 (38%), Positives = 491/886 (55%), Gaps = 113/886 (12%)
Query: 1 HKFYLFFF--PQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTL 55
H F F F P+K TT R F+R E+Y VHG+DA + K+N V +K +G + L
Sbjct: 17 HGFLSFIFSMPEKPDTTFRIFDRNEYYTVHGKDAIFAAKEVFKTNGV--IKYLGAGSRKL 74
Query: 56 ETVLVNK-----------------------------------------SNLSCFSHIL-- 72
E+V+++K NL+ F IL
Sbjct: 75 ESVILSKLNFEAFVKDLLLVRQYRVEVYRNHSKSSKEHDWRIEYKASPGNLTQFEDILFG 134
Query: 73 -------C--VISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKS 123
C V++ VGV VD +K + E PD++ +SNLE+++VQ S
Sbjct: 135 GATGAEGCAGVVAVRFATAADGQRVVGVGYVDAAQRKMGVCEFPDNEIFSNLESLLVQIS 194
Query: 124 PKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNA 183
PKECLL + + NK+ ++ R + ++ RK+ +FS +D+ QD+NRL+R E +
Sbjct: 195 PKECLLAQGDSSTDGNKLREVVQRGGMLVSDRKRADFSSKDITQDLNRLLRVKKGEAMAS 254
Query: 184 RLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ 243
L E+ A CL +++ +L+L+++E N N FS+ S+D +Y+ + +A + +L++
Sbjct: 255 STLSELDKQVAMSCLAAVVRFLDLLSDESNFNSFSLASLDLGQYMRLDNAAVGALNLF-- 312
Query: 244 QGST-SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
QGS SL G+L++CRTPQG RL+ QW+KQPL D I ER V V ++E R
Sbjct: 313 QGSPDDISGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLDLVESFVCDSELR 372
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQ 355
L PD+ LA + R A L+DCYRVY+ VSQ+P LI+ E L+Q
Sbjct: 373 QTCQGDLLHRFPDLHRLAKKFHRHSATLQDCYRVYQAVSQIPGLIAAFEKYSGSYQVLLQ 432
Query: 356 NVEAS---NLNTILSSLQSL--------------------------KMMDRKDAVMDKMK 386
V S +L T + Q + ++ ++ D + + M+
Sbjct: 433 AVFTSPLTDLQTDFTKYQEMVETTLDMNQIDHHEFLVKASFDPVLTELREKMDDLEESMQ 492
Query: 387 EYLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQD 443
L S AR L L A KT+KLE N+ GF R+T K + + ++T LD + GVRF +
Sbjct: 493 AVLNSAARELGLEAGKTVKLESNAMLGFYLRVTCKEEKGLRNNKKFTTLDVQKNGVRFTN 552
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
+L++ N +Y + EYE Q +IV+E+I I++GY L LSDV+AQ D +VS ++AS
Sbjct: 553 SKLSSLNEEYTRNKEEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQLDAVVSLALASV 612
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP PYVRP + G L L Q RHP +E ++IPNDV F GE SF ++TGPNMG
Sbjct: 613 SAPVPYVRPRILDEGCRRLELVQARHPCMETDADTAFIPNDVSFVQGERSFYIITGPNMG 672
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR +GV +AQIGCFVPC+ A +SV D I RVGA DSQ +G+STFM EM ETA
Sbjct: 673 GKSTYIRQVGVIALMAQIGCFVPCEKAELSVTDSILARVGAGDSQVKGVSTFMSEMLETA 732
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
+++ TENSL+IIDELGRGTST+DGFG+A +I+ +AS F LFATHFHE+ L+
Sbjct: 733 AILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKISCFCLFATHFHELTALASQ 792
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY 743
P+ N+ V+AL + L +LY+VK G C +S+G+H A++A +P +L AR+ +E E
Sbjct: 793 QPSVHNLHVTALTTHNTLTMLYRVKAGVCDQSFGIHVAELACFPPAVLAVAREKAEELE- 851
Query: 744 SLDTKTPSGDETNNREEEYFKT------VQEGEYQMFDFLQQCLSL 783
+ + P G N +EE+ +T Q GE + +FLQ+ SL
Sbjct: 852 --EFQEPMG---NQQEEDEPQTKRRRTDKQVGESLIQEFLQKVKSL 892
>gi|395829795|ref|XP_003788028.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
[Otolemur garnettii]
Length = 905
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 337/882 (38%), Positives = 507/882 (57%), Gaps = 82/882 (9%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP K+ ++ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGEMGKLRQVIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSTVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDMAAVRALNLF--QGS 316
Query: 247 TS-AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R +L
Sbjct: 317 VEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES---------LVQN 356
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE LV+N
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGNKXSLLLVEN 436
Query: 357 VE---ASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQ-G 412
E + + LS L+ + M D + KM+ L S AR L L K IKL++S Q G
Sbjct: 437 HEFLVKPSFDPNLSELREI-MND----LEKKMQSTLISAARDLGLEPGKQIKLDSSAQFG 491
Query: 413 FAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEE 470
+ +R+T K + + ++ +D + GV+F + +L + N +Y + EYE Q +IV+E
Sbjct: 492 YYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKE 551
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
++ IS+GY + + L+DVLAQ D +VSF+ AS AP PYVRP + G ++L RHP
Sbjct: 552 IVNISSGYVEPMQTLNDVLAQLDAVVSFAHASNGAPVPYVRPVILEKGRRRIILKASRHP 611
Query: 531 IVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
VE+Q V++IPND+YF+ + F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+SA
Sbjct: 612 CVEVQDEVAFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESA 671
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
+S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+IIDELGRGTST+DGF
Sbjct: 672 EVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATQDSLIIIDELGRGTSTYDGF 731
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
G+A +I+ +A+ F +FATHFHE+ L+ IPT N+ V+AL E+ L +LYQVK G
Sbjct: 732 GLAWAISDYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKG 791
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG-DETNNREEEYFKTVQEG 769
C +S+G+H A++A +P ++E A+ E E + G DE ++ + ++G
Sbjct: 792 VCDQSFGIHVAELANFPRHVIECAKQKALELEEFQNIGGSQGYDEMEPAAKKCYLEREQG 851
Query: 770 EYQMFDFLQQC--LSLSKQKDTNRILHLQETQEPGIEEYQSF 809
E + +FL + + ++ + N + L++ + I + SF
Sbjct: 852 EKIIQEFLSKVKQVPFTEMSEENITIKLKQLKAEVIAKNNSF 893
>gi|351695603|gb|EHA98521.1| DNA mismatch repair protein Msh2 [Heterocephalus glaber]
Length = 934
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 330/876 (37%), Positives = 493/876 (56%), Gaps = 101/876 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P K TT+R F+R +FY HGEDA L R+ ++K +G KTL++V
Sbjct: 19 FVRFFQAMPGKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYLGPAGTKTLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
S+ V+ +GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 SDTAASIGVVGIKMSTVDGQRQLGVGYVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RK+ +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETFGDMGKMRQIIQRAGILITERKRADFSTKDIYQDLNRLLKGKKGEQMNSVVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVKALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R NL
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDVELRQNL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGRHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMD----KMKEYL 389
++ L L+ MD+ + VMD KM+ L
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S A L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAAHDLGLDPGKQIKLDSSGQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 SSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQSLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGQGRIILKASRHACVEVQDEIAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATRIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE--YS 744
N+ V+AL ++ L +LYQVK G C +S+G+H A++A +P ++E AR E E S
Sbjct: 797 VNNLHVTALTTDETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIESARQKALELEEFQS 856
Query: 745 LDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQC 780
+ P D+ ++Y ++GE + +FL +
Sbjct: 857 IGASQPR-DDMEPVAKKYCLEREQGEKIIQEFLSKV 891
>gi|194387494|dbj|BAG60111.1| unnamed protein product [Homo sapiens]
Length = 865
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 321/818 (39%), Positives = 477/818 (58%), Gaps = 71/818 (8%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNKSNLSCFSHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAI 118
+ K + + + VGV VD +K + E PD+D +SNLEA+
Sbjct: 79 VGVK---------MSAVDGQRQ--------VGVGYVDSIQRKLGLCEFPDNDQFSNLEAL 121
Query: 119 IVQKSPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDS 178
++Q PKEC+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++
Sbjct: 122 LIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKG 181
Query: 179 ELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSL 238
E N+ +LPEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L
Sbjct: 182 EQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRAL 241
Query: 239 HVLPQQGSTSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVN 297
++ QGS T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V
Sbjct: 242 NLF--QGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVE 299
Query: 298 NTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE------ 351
+ E L E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE
Sbjct: 300 DAELSQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKH 359
Query: 352 -SLVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------------------------- 383
L+ V A+ L + S + M MD
Sbjct: 360 QKLLLAVFATPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDL 419
Query: 384 --KMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGG 438
KM+ L S AR L L K IKL++S Q G+ +R+T K + + ++ +D + G
Sbjct: 420 EKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNG 479
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
V+F + +L + N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF
Sbjct: 480 VKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSF 539
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVT 558
+ S AP PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++T
Sbjct: 540 AHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIIT 599
Query: 559 GPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMME 618
GPNMGGKSTYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM E
Sbjct: 600 GPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAE 659
Query: 619 MKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIA 678
M ETA++++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+
Sbjct: 660 MLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELT 719
Query: 679 LLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL- 737
L+ IPT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+
Sbjct: 720 ALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKA 779
Query: 738 --MKEYEY-----SLDTKTPSGDETNNREEEYFKTVQE 768
++E++Y D P+ + E+ K +QE
Sbjct: 780 LELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQE 817
>gi|354474732|ref|XP_003499584.1| PREDICTED: DNA mismatch repair protein Msh2 [Cricetulus griseus]
Length = 934
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 327/877 (37%), Positives = 490/877 (55%), Gaps = 104/877 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRK----SNVVYLVKTMGQKDKTLE 56
F FF P+K TT+R F+R +FY HGEDA L R SN ++ + +G K TL+
Sbjct: 19 FVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAARXXXXTSNSIHFLFILGAK--TLQ 76
Query: 57 TVLVNK-------------------------------------------SNLSCFSHILC 73
+V+++K NLS F IL
Sbjct: 77 SVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLAYKASPGNLSQFEDILF 136
Query: 74 VISE-DKTLETVLTNT--------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSP 124
++ ++ TV VGV VD +K + E PD+D +SNLEA+++Q P
Sbjct: 137 GSNDMSASIGTVGVKMSTVDGQRHVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGP 196
Query: 125 KECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNAR 184
KEC+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+
Sbjct: 197 KECVLPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDICQDLNRLLKGKKGEQMNSA 256
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ 244
+LPEM A L ++I +LEL++++ N QF + + D+ +Y+ + A + +L++ Q
Sbjct: 257 VLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFRQYMRLDMAAVRALNLF--Q 314
Query: 245 GSTSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
GS T SL +L++C+T QG RL+ QW+KQPL D + I ER V V ++E R
Sbjct: 315 GSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDKNRIEERLNLVETFVEDSELRQ 374
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL-------ESLVQN 356
L E LR PD+ LA + R+ A L+DCYR+Y+GV+QLP +I L ++L+
Sbjct: 375 TLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPSVIQALKKYQGRHQALLMA 434
Query: 357 VEASNLNTILSSLQSLKMM-----------------------------DRKDAVMDKMKE 387
V + L + S + M + D + KM+
Sbjct: 435 VFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQS 494
Query: 388 YLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDD 444
L S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F +
Sbjct: 495 TLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNS 554
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
L++ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S
Sbjct: 555 ELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNA 614
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
AP PYVRP + G G +VL RH VE+Q V++IPNDV F+ + F+++TGPNMGG
Sbjct: 615 APVPYVRPVILEKGKGRIVLKASRHACVEIQDEVAFIPNDVCFEKDKQMFHIITGPNMGG 674
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR GV V +AQIGCFVPC+SA +S++D I RVGA DSQ +G+STFM EM ETA
Sbjct: 675 KSTYIRQTGVIVLMAQIGCFVPCESAEVSILDCILARVGAGDSQLKGVSTFMAEMLETAA 734
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
+++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ I
Sbjct: 735 ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALASQI 794
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-- 742
PT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E AR E E
Sbjct: 795 PTVNNLHVTALTSEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVVECARQKALELEEF 854
Query: 743 YSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQ 779
S+ T E ++ + ++GE + +FL +
Sbjct: 855 QSIGTSQGRDGEMEPPAKKCYLEREQGEKIIMEFLSK 891
>gi|291240666|ref|XP_002740239.1| PREDICTED: mutS homolog 2-like [Saccoglossus kowalevskii]
Length = 929
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 322/833 (38%), Positives = 479/833 (57%), Gaps = 97/833 (11%)
Query: 4 YLFFF---PQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
+L FF +K TT R F+R E+Y HG DA ++ ++K +G K +E+V+
Sbjct: 19 FLSFFRSMSEKPDTTFRVFDRTEYYTCHGSDAVFAAKEVFKTTGVIKYLGTGTKKVESVV 78
Query: 60 VNK----------------------------------------SNLSCFSHILCVISEDK 79
++K NL+ F IL ++
Sbjct: 79 LSKMNFESLVKDLLLVRQYRVEVYKNKGGGKNNDWTLEFKASPGNLTQFEEILFGANDMS 138
Query: 80 TLETVLT---------NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
T VL +G A D +K + E PD+D +SNLEA++VQ PKEC+LP
Sbjct: 139 TSACVLAVKMAMDGGHKIIGAAFADATLRKMGVCEFPDNDQFSNLEALVVQIGPKECILP 198
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
+ NK+ IL+R+ + +T RKK++++ +D +QD+NRL++F + N+ L EM
Sbjct: 199 SGDSGPEMNKLKQILERSGLLITDRKKSDYNTKDNVQDLNRLLKFKKEDQANSSALAEME 258
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQ 250
T A L +LI YLEL+++E N QF + + D S+Y+ + +A + +L++LP +
Sbjct: 259 KTHAMSSLSALIKYLELLSDESNFGQFQLTTFDLSQYMRLDAAAVRALNLLPSTLDGGNK 318
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
+ LLG+L++CRTPQG RLLAQW+KQPL D + I ER V + + E R L + L
Sbjct: 319 SM-CLLGLLNKCRTPQGQRLLAQWVKQPLMDKNKIEERLNIVEAIFEDNELRQTLLDDQL 377
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLN 363
+ +PD Q LA + RKKA L+DCYRVY+ V +P L+ LE L+ V ++ L
Sbjct: 378 KRVPDFQRLAKKFQRKKATLQDCYRVYQAVEYMPHLLETLERHGGKHQMLLMEVFSNPLK 437
Query: 364 TIL-------------------------------SSLQSLKMMDRKDAVMDKMKEYLEST 392
+L LQ+L+ ++ + + D++K L+
Sbjct: 438 EVLMDFSKYQEMVETTLDMKQVEQHEFVIKPDFDPDLQTLR--EKINDLEDEIKSQLKKA 495
Query: 393 ARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATA 449
+ LN+ A+K +KLE NS G+ +R+T K I + +Y +DT + GVRF + L +
Sbjct: 496 STDLNVEANKVLKLESNSQLGYFFRVTRKEEKVIRNNRKYITIDTNKNGVRFTNSALKSF 555
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
N +Y + Y Q+++V E+I I+AGY + ++++LAQ DVLVSF+ S AP PY
Sbjct: 556 NEEYMLAKESYNETQKAVVMEIISIAAGYVDPMQLINEILAQLDVLVSFACVSANAPIPY 615
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
+RP ++ G+G L L Q RHP +E+Q V++IPNDV F + F+++TGPNMGGKSTYI
Sbjct: 616 IRPTLQAKGSGQLKLIQSRHPCLEVQDEVAFIPNDVTFDKEKEMFHIITGPNMGGKSTYI 675
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R IGV +AQIGCFVPCD A +++VD I RVGA DSQ +G+STFM EM ETA++++
Sbjct: 676 RQIGVVTLMAQIGCFVPCDQAELTIVDCILARVGAGDSQLKGVSTFMSEMLETASILRSA 735
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
+E SLVIIDELGRGTST+DGFG+A +I+ +A+ + F LFATHFHE+ L+ +PT N
Sbjct: 736 SECSLVIIDELGRGTSTYDGFGLAWAISEYIATKIKCFCLFATHFHELTSLADAVPTVNN 795
Query: 690 VQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ VSAL D L LLY+VKPG C +S+G+H A+M +P+ +++ A+ E E
Sbjct: 796 LHVSALTTGDTLTLLYKVKPGVCDQSFGIHVAEMVHFPQKVIDFAKQKAAELE 848
>gi|149050462|gb|EDM02635.1| mutS homolog 2 (E. coli) [Rattus norvegicus]
gi|171846747|gb|AAI61846.1| Msh2 protein [Rattus norvegicus]
Length = 933
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 335/874 (38%), Positives = 494/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG KTL+TV
Sbjct: 19 FVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKTLQTV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRHYRVEVYKNKAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKT--------LETV-LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ T L TV VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSTSIGIMGIKLSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CILPGGETAGDMGKLRQVIQRGGILITERKRIDFSTKDIYQDLNRLLKGRKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+T QG RL++QW+KQPL D + I ER V V ++E R +L
Sbjct: 317 VEDTTGSQSLAALLNKCKTAQGQRLVSQWIKQPLMDKNRIEERLNLVEAFVEDSELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+GV+QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPNVIQALEKYQGRHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMD----KMKEYL 389
++ L L+ MD+ + VMD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + L
Sbjct: 497 ISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSEL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLA D +VSF+ S AP
Sbjct: 557 SSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAHLDAVVSFAHVSNAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGKGRIILKASRHACVEVQDDVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALASQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKTGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQS 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
T G DET + ++GE + +FL +
Sbjct: 857 IGTSQGHDETQPAAKRRCLEREQGEKIILEFLSK 890
>gi|170065385|ref|XP_001867917.1| DNA mismatch repair protein spellchecker 1 [Culex quinquefasciatus]
gi|167882495|gb|EDS45878.1| DNA mismatch repair protein spellchecker 1 [Culex quinquefasciatus]
Length = 901
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 320/828 (38%), Positives = 481/828 (58%), Gaps = 97/828 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHGEDAELIQR---KS-NVVYLVKTMGQKDKTLETVLVNKSNL 65
QKS TT+RFF+R ++Y HG DAE + + KS NVV ++ G +D+ L V+++K+N
Sbjct: 12 QKSSTTVRFFDRSDYYSCHGPDAEFVAKCVFKSINVVKIMAPAGLEDE-LPYVVLSKNNF 70
Query: 66 SCFSHILCVI----------------SEDKTLE-------------TVLTNT-------- 88
F L ++ S D LE + N
Sbjct: 71 ESFIRDLLLVRNYRAEVYTNKGPTKTSNDWQLEFKGSPGNLTQFEDLLFANNGMVAGSAL 130
Query: 89 -------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLN 135
+G+A V+ + + F + E DDD+YS LEA+IV PKEC+LP+ +
Sbjct: 131 IALHVKLLGKQKIIGIACVENNERLFSVSEFVDDDFYSELEAVIVILGPKECILPSPR-D 189
Query: 136 DNKNKIVTILDRNKVCMTGRKKNEFSEE--DLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
+ ++I T+L+RN V +T +KK EFS E +++ D+N+L+ F + + ++A +PE TT
Sbjct: 190 ADYDRIKTLLERNNVVVTSKKKQEFSLEKNEVISDLNKLLHFAEGQQESANTMPETSKTT 249
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQ 250
A L I YLEL N+ N + + ++ ++VH+ +A +S+L++ P+ G +++A
Sbjct: 250 ALAALGVAIRYLELTNDSANHGHYELKLLNLHRFVHLDAAAVSALNLFPKPGLAMNSAAF 309
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
+ S+LG+LDRCRTPQGHRL+ QW+KQPL+ +D I +R V LV++T R LH+ L
Sbjct: 310 KWHSVLGVLDRCRTPQGHRLVNQWLKQPLRSIDIIKDRQDIVESLVDSTNVRSELHDVHL 369
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTIL 366
+ +PD+ L ++ RKKA L+D YR+Y+ V ++P ++ +LES+ ++++ + L
Sbjct: 370 KRIPDILILIKKLLRKKASLQDIYRLYQVVLRIPIVLRLLESIENTAMRSIVLDPMKDTL 429
Query: 367 SSLQSLKMMDRK-----------------------------DAVMDKMKEYLESTARRLN 397
L+ K M + D V KMK L A L
Sbjct: 430 GDLKMFKSMVEQILDLTAIERGEYLVKPTFDDQLKEFKQEMDEVESKMKRLLTKVADDLG 489
Query: 398 LVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQ 454
L A +IKL+ GF +RI++K I ++ +LD V+GG RF +D+L N +
Sbjct: 490 LDAGSSIKLDFVGHHGFHFRISLKDETLIRKSTKFRVLDAVKGGARFTNDKLTDLNGDFA 549
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
+ + YE Q+SIV+EVI I+ GY + L++ +AQ D VSF+IA+ AP+PYVRP +
Sbjct: 550 SAKESYEAQQKSIVDEVIRIAIGYVEPWTMLNNQIAQLDCFVSFAIAAVSAPEPYVRPKI 609
Query: 515 KPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
MG G L L Q RHP +ELQ VS+I ND F+ + + ++TGPNMGGKST+IRS+GV
Sbjct: 610 FAMGEGRLKLTQLRHPCLELQEDVSFIANDAVFEKNKTTMYIITGPNMGGKSTFIRSVGV 669
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
+V +A +G FVPC A IS+VD I RVGA D+ +G+STFM+EM ETA +++ TENSL
Sbjct: 670 AVLMAHVGAFVPCAEAEISIVDSILGRVGADDNLSKGLSTFMVEMVETAGIVRTATENSL 729
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
VIIDELGRGTST++G G+A SIA LA + F+LFATHFHEI ++ + T ++ + A
Sbjct: 730 VIIDELGRGTSTYEGCGIAWSIAEYLAKQTKCFSLFATHFHEITEMTEQVKTVKSCHMDA 789
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ +D LLYQVK G KS+G+ AK+A +P ++E A+ L + E
Sbjct: 790 IADKDGFTLLYQVKEGVMPKSFGIKVAKLANFPTAVVELAQKLYDDCE 837
>gi|242011403|ref|XP_002426440.1| DNA mismatch repair protein MsH2, putative [Pediculus humanus
corporis]
gi|212510545|gb|EEB13702.1| DNA mismatch repair protein MsH2, putative [Pediculus humanus
corporis]
Length = 894
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 325/873 (37%), Positives = 500/873 (57%), Gaps = 120/873 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
F+ FF P+KS TTIRFFNR+EFY VHG DA + ++ + VK +G+ + E+++
Sbjct: 16 FFSFFKKLPEKSSTTIRFFNRIEFYTVHGLDALFVAKEVFKSMSSVKYLGKGETKFESLV 75
Query: 60 VNKS----------------------------------------NLSCFSHIL------- 72
+NK+ NL+ F I
Sbjct: 76 LNKNQFETLVKDLLIIHHYRVEVYSPKGGVKSNDWFLELKGSPGNLTAFEDIFNSELDVG 135
Query: 73 CVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP-- 130
+ K ++ TVGV+I+DL T+ + + PDDD +++LE IVQ+SPKE ++P
Sbjct: 136 AAVLAVKVVDEAKVKTVGVSIIDLSTESMGICQFPDDDQFTDLEGFIVQQSPKEIIIPDL 195
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
EY + I+ I +R + K++ F+ E+L QD+N L+ + + + +NA LPEM
Sbjct: 196 PEY-----SSILKIANRCCGMVVKLKQSNFNTENLAQDLNHLLEWKEGQSQNASALPEMK 250
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQ 250
L AT CL +LI YLEL N+N F + +++ ++VHM A +L ++PQQ S+S
Sbjct: 251 LNIATSCLSALIKYLELSGK--NLN-FKLETVEPKRFVHMDIASAKALGLIPQQSSSSQ- 306
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
D+L+ L++CRTPQG RLL QW+KQPLKD+ I ERH V +++TE RM+L E L
Sbjct: 307 --DTLIHFLNKCRTPQGRRLLTQWVKQPLKDIRTISERHDIVAAFIDDTELRMSLSEEHL 364
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI----------SILESLVQNVEA- 359
R PD Q L ++ K A L+DCY++Y V +P L+ S+ E+ + +E
Sbjct: 365 RWFPDGQLLCRKLKNKNASLQDCYKIYRAVEHIPSLLESLKTATYSASVKETFLSPLEEV 424
Query: 360 ----SNLNTILSSLQSLKMMDRK-------------------DAVMDKMKEYLESTARRL 396
S ++SS + +++ D + +++++ L + AR L
Sbjct: 425 SEDLSKFQEMISSTLDMDQINKGLFLIKADFSEELSELKASLDYLDEEIQKELGNAAREL 484
Query: 397 NLVADKTIKLENSPQ-GFAYRIT-----MKLNNSIDDRYTILDTVRGGVRFQDDRLATAN 450
+L + K +KLE PQ G+ +RI+ K+ NS ++ ILD+ G+RFQ L N
Sbjct: 485 HLESGKILKLETMPQYGYHFRISNKKEESKIRNS--SKFKILDSTNAGLRFQSSSLKELN 542
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
Y ++ Y+ Q+++V+EV+ I+AGYT L L++++A DVL SF++ + A PYV
Sbjct: 543 EDYLEKRKSYDDCQKTVVDEVLDIAAGYTGPLMNLNNIIANLDVLTSFAVIAANAVTPYV 602
Query: 511 RPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
RP ++P+ G L L + RHP++E Q +S IPND+ + +F ++TGPNMGGKSTYIR
Sbjct: 603 RPQIRPLEDGILRLKEARHPLLEAQDSISVIPNDILLEKNGKTFYIITGPNMGGKSTYIR 662
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
++G++V LAQIG FVPC A IS+ D I R+G++D Q G+STFM EM E + ++++ T
Sbjct: 663 TVGINVLLAQIGSFVPCLEAEISLKDSILARIGSSDRQSIGVSTFMNEMVEISAILQRAT 722
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNV 690
ENSLV+IDELGRGTST++G G+A +IA LAS + FTLFATHF E+ L I + NV
Sbjct: 723 ENSLVMIDELGRGTSTYEGCGLAWAIAEHLASTIKAFTLFATHFQELVSLEDEISSVANV 782
Query: 691 QVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD----LMKEYEYSLD 746
V+A+ + L +LY+V PGS +S+G+ AKMAG+ + ++E AR+ L ++ SL+
Sbjct: 783 HVTAMTDQYELTMLYKVCPGSSDRSFGLEIAKMAGFQKHVIENAREKLLKLDQKAGLSLN 842
Query: 747 TKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQ 779
+ +G+E ++EG+ + DF Q+
Sbjct: 843 GQHLTGEE-----------IKEGKKILNDFFQK 864
>gi|260835244|ref|XP_002612619.1| hypothetical protein BRAFLDRAFT_280395 [Branchiostoma floridae]
gi|229297997|gb|EEN68628.1| hypothetical protein BRAFLDRAFT_280395 [Branchiostoma floridae]
Length = 905
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 330/871 (37%), Positives = 477/871 (54%), Gaps = 98/871 (11%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLVNKSNLS 66
P+K TT R F+R E+Y HG DA ++ + +VKTMG +E V ++K N
Sbjct: 1 MPEKPATTFRAFDRTEYYTAHGPDAIFAAKEIFKTMGVVKTMGTGPNKMEYVNLSKMNFE 60
Query: 67 CFSHILCVISEDK----------------------------------------TLETVLT 86
L ++ + + T VL
Sbjct: 61 SLVRELLLVRQYRLEVYKNKGTAKNNDWELDIKASPGNLTQVEDFIFGSSGAVTSSGVLA 120
Query: 87 ---------NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDN 137
VG D +K + E D+D +SNLEA+++Q PKECL+P+ +
Sbjct: 121 VKLSGEGNNKVVGAGYADATMRKLGVCEFVDNDQFSNLEALVIQTGPKECLIPSGENTPD 180
Query: 138 KNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFD-DSELKNARLLPEMCLTTATH 196
++ +L+RN + +T R+K E+S +D +QD+NRL++ E N+ L E+ T A
Sbjct: 181 MGRLRMVLERNGLLITERRKAEYSTKDNVQDLNRLLKPKTKGEQVNSAALSEIEKTAAMA 240
Query: 197 CLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLL 256
+ +LI YLEL+ +E N QF + + D ++Y+ + +A + +L++LP + S+
Sbjct: 241 SVSALIKYLELLGDETNFGQFKLVTFDLNQYMRLDAAAVRALNLLPTS-LDGGNRFQSVA 299
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+L CRT QGHRLL QW+KQPL D + I ER V LV + E R L E LR +PD
Sbjct: 300 GLLTHCRTSQGHRLLTQWVKQPLMDKNRIEERLNVVEALVEDAELRQTLQEEQLRKVPDF 359
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQNVEASNLNTILSSL 369
LA + RK+A L+DCYRVY+ ++ +P L LE SL+ + ++ + +L
Sbjct: 360 HRLAKKFQRKRANLQDCYRVYQALNIIPHLTEALEKHAGSHRSLLMELFSNPIKELLYDF 419
Query: 370 QSLKMMDRKDAVMDK-----------------------------MKEYLESTARRLNLVA 400
+ + M MD+ +K +L AR L L
Sbjct: 420 RKFQEMVETTMDMDRVDKHEFVIKPDFDDNLKELREKMNKLDEDIKSHLNEAARELKLEP 479
Query: 401 DKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+K +KLE S Q G+ +R+T+K ++ + +Y L+T + GV+F D L N +Y +
Sbjct: 480 NKVLKLETSTQLGYHFRVTLKEEKALRGNKKYRTLETSKNGVKFTDSDLQRMNEEYLKSK 539
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
Y Q+++V+E++GI+AGY + + LSDV+AQ D LVSF+ AS AP PYVRP +
Sbjct: 540 EAYADTQKAVVDEILGIAAGYVEPMGSLSDVIAQLDALVSFACASANAPIPYVRPKLTEK 599
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
G G + L RHP +ELQ V +IPND F E F +VTGPNMGGKSTYIR IGV+V
Sbjct: 600 GEGGIKLVNARHPCLELQDDVQFIPNDASFDRDEQMFLIVTGPNMGGKSTYIRQIGVNVL 659
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQIGCFVPCDSA + +VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+II
Sbjct: 660 MAQIGCFVPCDSAEVCIVDCILARVGAGDSQLKGVSTFMSEMLETASILRSATKDSLIII 719
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DELGRGTST+DGFG+A +I+ +A+ F LFATHFHE+ L+ V+PT N+ V+AL
Sbjct: 720 DELGRGTSTYDGFGLAWAISEHIATKIGAFCLFATHFHELTALADVVPTATNLHVTALTT 779
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE----YSLDTKTPSG- 752
L LLY+VKPG C +S+G+H A++A +PE ++E AR E E SL G
Sbjct: 780 GGTLTLLYKVKPGVCDQSFGIHVAELAHFPEKVIEFARQKALELEDYQSISLSGTAMEGT 839
Query: 753 DETNNREEEYFKTVQEGEYQMFDFLQQCLSL 783
D ++ K QEGE + DFL + L
Sbjct: 840 DAVAAKKRRIAK--QEGEAIIQDFLSKVKDL 868
>gi|305855210|ref|NP_001182286.1| DNA mismatch repair protein Msh2 [Sus scrofa]
gi|285818416|gb|ADC38881.1| MutS-like protein 2 [Sus scrofa]
Length = 934
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 324/844 (38%), Positives = 475/844 (56%), Gaps = 98/844 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ +VK MG KTLE+V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVVKFMGPAGAKTLESV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKEHDWYLAFKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D SNLEA+++Q PKE
Sbjct: 139 NDMSAPIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQLSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGDTAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL+ ++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLADDSNFGQFELTTFDFSQYMKLDMAAVRALNLF--QGS 316
Query: 247 TS-AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R +L
Sbjct: 317 VEDTAGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I +E +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAMEKYEGQHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMD----KMKEYL 389
++ L L+ MD+ + +MD KM+ L
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVVVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I +A+ F +FATHFHE+ L+ IP
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAIPEYIATKIGAFCMFATHFHELTALANQIPA 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E +
Sbjct: 797 VNNLHVAALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQN 856
Query: 747 TKTP 750
P
Sbjct: 857 IGAP 860
>gi|334312805|ref|XP_001382178.2| PREDICTED: DNA mismatch repair protein Msh2 [Monodelphis domestica]
Length = 934
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 322/878 (36%), Positives = 491/878 (55%), Gaps = 99/878 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMG-QKDKTLETV 58
F FF P K TT+R F+R ++Y HGEDA L R+ ++K +G K LE+V
Sbjct: 19 FVRFFQALPAKPLTTVRLFDRGDYYTAHGEDALLAAREVFKTQAVIKYIGLTGSKKLESV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHIL--- 72
+++K NLS F IL
Sbjct: 79 VLSKMNFESFSKDLLLVRQYRVEVYKNKAGNKATKENDWHVAFKASPGNLSQFEEILFGN 138
Query: 73 ----CVISEDKTLETVLTNT--VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
C I +++ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSCSIGGVGVKLSIVDGQRLVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ +++R + +T RKK +F+ +D++QD+NRL++ + N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQVIERGGILITERKKVDFAAKDIVQDLNRLLKSKKGDQVNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I YLEL++++ N QF + + D S+Y+ + +A + +L++ QGS
Sbjct: 259 PEMENQVAISSLSAVIKYLELLSDDSNFGQFELTTFDLSQYMKLDNAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
++ SL +L++C+TPQG RLL QW+KQPL D + I ER V V + E R +L
Sbjct: 317 AEDKSGTQSLAALLNKCKTPQGQRLLNQWIKQPLLDKNRIEERLNLVEAFVVDAELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES----------LVQ 355
E LR PD+ A + R A L+DCYR+Y+ ++QLP +I LE +
Sbjct: 377 QEDLLRRFPDLHRFAKKFQRHAANLQDCYRMYQAINQLPNVIQALEKHEGKHQMLLLAIF 436
Query: 356 NVEASNLNTILSSLQSL--------------------------KMMDRKDAVMDKMKEYL 389
++L++ S Q + ++ + D + KM+ L
Sbjct: 437 VTPLTDLHSDFSKFQEMIETTLDMNQVENHEFLVKASFDPHLTQLRESIDNLEKKMQSSL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L + A K IKL+++ Q G+ +R+T K + + + LD + GV+F + +L
Sbjct: 497 TSAARELGIEAGKHIKLDSNAQLGYYFRVTCKEEKVLRSNKNFNTLDVQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
A N +Y I+ EYE Q +IV+E+I IS+GY + + L+DVLAQ D +VSF+ + AP
Sbjct: 557 AAFNDEYLKIRDEYEEAQDAIVKEIINISSGYVEPMQTLNDVLAQLDAVVSFANVANGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q V++IPND+ F+ + +F+++TGPNMGGKS
Sbjct: 617 IPYVRPVILEKGQGRIILKGSRHACVEVQDEVAFIPNDINFEKNKQTFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA D Q +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDCQMKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ +PT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALADQLPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY-EYSL 745
N+ VSAL ++ L +LYQVK G C +S+G+H A++A +P+ ++E A+ E E+
Sbjct: 797 VNNLHVSALTTDEALTMLYQVKKGVCDQSFGIHVAELANFPKHVIENAKQKALELEEFQH 856
Query: 746 DTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSL 783
K DE + + ++GE + FL + L
Sbjct: 857 FGKPQESDEMEPATKRCYHEREQGEKIIQTFLAKVKEL 894
>gi|410222628|gb|JAA08533.1| mutS homolog 2, colon cancer, nonpolyposis type 1 [Pan troglodytes]
Length = 934
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 330/870 (37%), Positives = 488/870 (56%), Gaps = 106/870 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQTY-DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGCQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
Query: 744 -----SLDTKTPSGDETNNREEEYFKTVQE 768
D P+ + E+ K +QE
Sbjct: 857 IGESQGYDIMEPAAKKCYLEREQGEKIIQE 886
>gi|4557761|ref|NP_000242.1| DNA mismatch repair protein Msh2 isoform 1 [Homo sapiens]
gi|1171032|sp|P43246.1|MSH2_HUMAN RecName: Full=DNA mismatch repair protein Msh2; Short=hMSH2;
AltName: Full=MutS protein homolog 2
gi|149242559|pdb|2O8B|A Chain A, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G T MISPAIR
gi|149242563|pdb|2O8C|A Chain A, Human Mutsalpha (msh2/msh6) Bound To Adp And An
O6-methyl-guanine T Mispair
gi|149242567|pdb|2O8D|A Chain A, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G DU MISPAIR
gi|149242575|pdb|2O8F|A Chain A, Human Mutsalpha (Msh2MSH6) BOUND TO DNA WITH A SINGLE BASE
T INSERT
gi|364506055|pdb|3THW|A Chain A, Human Mutsbeta Complexed With An Idl Of 4 Bases (Loop4)
And Adp
gi|364506058|pdb|3THX|A Chain A, Human Mutsbeta Complexed With An Idl Of 3 Bases (Loop3)
And Adp
gi|364506062|pdb|3THY|A Chain A, Human Mutsbeta Complexed With An Idl Of 2 Bases (Loop2)
And Adp
gi|364506066|pdb|3THZ|A Chain A, Human Mutsbeta Complexed With An Idl Of 6 Bases (Loop6)
And Adp
gi|432998|gb|AAA61870.1| homolog of bacterial MutS proteins [Swiss-Prot accession numbers
P23909, P10339, and P27345]; germline mutations are
responsible for hereditary nonpolyposis colon cancer
(HNPCC) [Homo sapiens]
gi|433147|gb|AAA18643.1| homolog of S. cerevisiae Msh2p [Swiss-Prot accession number P25847]
and bacterial MutS proteins [Swiss-Prot accession
numbers P23909, P10339, and P27345] [Homo sapiens]
gi|1000867|gb|AAB59564.1| DNA mismatch repair protein [Homo sapiens]
gi|1000869|gb|AAB59565.1| DNA mismatch repair protein [Homo sapiens]
gi|1000881|gb|AAA76858.1| DNA mismatch repair protein [Homo sapiens]
gi|18204306|gb|AAH21566.1| MutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) [Homo
sapiens]
gi|46488018|gb|AAS99351.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) [Homo
sapiens]
gi|119620619|gb|EAX00214.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli),
isoform CRA_b [Homo sapiens]
gi|123983816|gb|ABM83484.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)
[synthetic construct]
gi|123998193|gb|ABM86698.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)
[synthetic construct]
gi|224487757|dbj|BAH24113.1| mutS homolog 2, colon cancer, nonpolyposis type 1 [synthetic
construct]
Length = 934
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 328/870 (37%), Positives = 486/870 (55%), Gaps = 106/870 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
Query: 744 -----SLDTKTPSGDETNNREEEYFKTVQE 768
D P+ + E+ K +QE
Sbjct: 857 IGESQGYDIMEPAAKKCYLEREQGEKIIQE 886
>gi|332226455|ref|XP_003262405.1| PREDICTED: DNA mismatch repair protein Msh2 isoform 1 [Nomascus
leucogenys]
Length = 934
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 328/870 (37%), Positives = 486/870 (55%), Gaps = 106/870 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLSAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIMLKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
Query: 744 -----SLDTKTPSGDETNNREEEYFKTVQE 768
D P+ + E+ K +QE
Sbjct: 857 IGESQGYDIMEPAAKKCYLEREQGEKIIQE 886
>gi|307192503|gb|EFN75691.1| DNA mismatch repair protein Msh2 [Harpegnathos saltator]
Length = 857
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/743 (41%), Positives = 457/743 (61%), Gaps = 50/743 (6%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTIL 145
+ VG++ VD+ + + E D++ +SNLE+++V +PKECLL + + ++
Sbjct: 89 SRVVGLSCVDVVSTLISVAEFQDNESFSNLESLVVTLAPKECLLIQGEGSYEFQNLKQMM 148
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
+R+ V +T RKK+EFS + +++D+N L++F + +NA+ LPE+ L A +LI YL
Sbjct: 149 ERSNVLVTLRKKSEFSSDSVIEDLNTLIKFKKGQKQNAQSLPEVNLNIAMSATSALIKYL 208
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS---AQTYDSLLGILDRC 262
+L ++E +MNQF++ ++ S+Y+ + SA + +L++ P+ S S S+L +LD+C
Sbjct: 209 DLTSDEGHMNQFALKQVEQSRYLRLDSAAIKALNIEPRVDSASNLHGNPVASILTLLDKC 268
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
RT QGHRL+AQW++QPL+DL I ERH V +LV N E R L E LR +PD+Q LA +
Sbjct: 269 RTAQGHRLIAQWVRQPLRDLSLIKERHDIVELLVKNNELRSALCEDYLRRIPDLQQLAKK 328
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-----------LSSLQS 371
+ RKK+ L+DCY++Y VS LPKL LE L + L I + Q
Sbjct: 329 LARKKSALQDCYKIYLCVSYLPKL---LEQLAPEANLAALKAIIIDPLKELIEDMDKFQQ 385
Query: 372 L-------------------KMMDRKDAVMDKMKEYLESTARRLNLVAD-------KTIK 405
L D A+ D M E E ++L+ VAD K IK
Sbjct: 386 LVEQTIDLDAAEKGDFMINSGFTDDFKALKDTMDEMEEIIQQQLSKVADDLLLEAGKAIK 445
Query: 406 LENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
LE++ Q G+ +RIT+K + ++ Y ILD+ + GVRF++ +L+ N + A + +Y
Sbjct: 446 LESNQQFGYYFRITLKEEKVLRNKKHYNILDSNKTGVRFRNSKLSELNDDFIAARNKYMD 505
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q+ ++ E++GI+AGY++T+ + VLA DVL +F+ A+ A K YVRP M P G L
Sbjct: 506 KQKDVIAEIMGIAAGYSETVRAIGSVLACLDVLTAFASAAVSANKVYVRPDMVPSEEGEL 565
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
L Q RHP +E+Q G+ YI NDV FK + F ++TGPNMGGKSTYIRS+GV+ +A IG
Sbjct: 566 NLVQIRHPCLEMQQGIDYIANDVNFKRDQCHFRIITGPNMGGKSTYIRSVGVTALMAHIG 625
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVPCD ATIS++D I RVGA DSQ +G+STFMMEM ETA ++K T NSLVIIDELGR
Sbjct: 626 SFVPCDKATISLLDCILARVGADDSQLKGLSTFMMEMIETAAILKTATCNSLVIIDELGR 685
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GTST++G G+A SIA LA + + LFATHFHEI L+ I T +N V+AL + + L
Sbjct: 686 GTSTYEGCGIAWSIAEHLAKDIKSYCLFATHFHEITKLAEEISTVKNEHVTALVENNKLT 745
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEY 762
LLY+VK G C +S+G+H AKMA +P+D++E A+ E E D + + ++N +++
Sbjct: 746 LLYKVKSGICDQSFGLHVAKMANFPQDVIEFAKRKQAELE---DYEGVVFEGSDNPQKKR 802
Query: 763 FKTVQEGEYQMFDFLQQCLSLSK 785
K +QE E + FL +C SL +
Sbjct: 803 -KIIQEAETLISQFLTKCDSLDQ 824
>gi|397504274|ref|XP_003822726.1| PREDICTED: DNA mismatch repair protein Msh2 [Pan paniscus]
gi|410258444|gb|JAA17189.1| mutS homolog 2, colon cancer, nonpolyposis type 1 [Pan troglodytes]
gi|410298744|gb|JAA27972.1| mutS homolog 2, colon cancer, nonpolyposis type 1 [Pan troglodytes]
Length = 934
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 328/870 (37%), Positives = 486/870 (55%), Gaps = 106/870 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQTY-DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGCQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
Query: 744 -----SLDTKTPSGDETNNREEEYFKTVQE 768
D P+ + E+ K +QE
Sbjct: 857 IGESQGYDIMEPAAKKCYLEREQGEKIIQE 886
>gi|75062324|sp|Q5XXB5.1|MSH2_CERAE RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|52632375|gb|AAU85549.1| mismatch repair protein [Chlorocebus aethiops]
Length = 933
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 323/840 (38%), Positives = 478/840 (56%), Gaps = 101/840 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPND+YF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
>gi|321461885|gb|EFX72912.1| mismatch repair ATPase Msh2 [Daphnia pulex]
Length = 915
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/884 (37%), Positives = 507/884 (57%), Gaps = 104/884 (11%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKSN 64
P+K TT+RFF+R EF+ ++G+DA L R K++ V VK +G K LE+V+ NKS+
Sbjct: 23 LPEKLATTLRFFDRGEFFTLYGQDALLASRDYFKTHSV--VKMLGYGAKKLESVVFNKSH 80
Query: 65 LSCFSHILCVISE-----------DKTLE------------------TVLT--------- 86
F+ + ++ D +L+ T +T
Sbjct: 81 FENFARDVLLVKHYCIEIYNGSKSDWSLQYQASPGNLTQVEDLIFGSTDITSQVGILAFK 140
Query: 87 ----NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP--AEYLNDNKNK 140
N +G + VD +K + + D+D +SNLE++IVQ SPKE L+P Y+
Sbjct: 141 IGSENQIGCSYVDTYARKILVAQFSDNDAFSNLESLIVQLSPKEVLIPHGEAYVAPK--- 197
Query: 141 IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
T+L+R+ + + KK EFS + ++ +NRL+RF + +NA LPE+ L + L +
Sbjct: 198 --TMLNRHGLLVNENKKAEFSSTESVRLLNRLLRFKKGQQENAAALPEVSLDHSMAALAA 255
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS------AQTYDS 254
L+ +L+LM +E N Q+S+ + D+++Y+ + SA ++LH+ S A +
Sbjct: 256 LVKHLDLMADETNFGQYSLQNFDFTQYMRLDSAASAALHLTSYGAEVSTMVTSKAGAPRT 315
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
+ +L++CRT G RLLAQW+KQPL D + I R V VN+ + R + E LR +P
Sbjct: 316 IAALLNKCRTSGGQRLLAQWIKQPLTDKNRIDRRLDVVETFVNDVQLRQTITEDHLRRMP 375
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS-ILES-----------LVQNVEASN- 361
D Q LA ++ + KA L+D Y++Y G+S+LP L+ +LE+ L+Q + +N
Sbjct: 376 DYQRLAKKLQKAKANLQDLYKLYLGLSRLPVLVDCLLENQGDHAAVLIGVLIQPLRNANE 435
Query: 362 ----LNTILSSLQSLKMMDRKDAVM-----DKMKEY--------------LESTARRLNL 398
L ++ + L DR + ++ D++ E L A L L
Sbjct: 436 KLVKLKEMVETTIDLNQADRGEFIIKADFDDQLGELKKDLDDCGSRAEKVLSRAASDLKL 495
Query: 399 VADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQA 455
K++KLE++ Q G+ +R+T+K ++ + Y +DT + GVRF++ LA N Y
Sbjct: 496 ETSKSVKLESNAQIGYYFRVTLKDEKNLRNNRNYHTIDTNKNGVRFRNPDLAQVNETYLK 555
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
++++YE Q S+V+E++ ++AGY + L L+D L++ DVL SF++ S AP PYVRP +
Sbjct: 556 VRQDYEQQQSSVVKEILSVAAGYVEPLQSLNDALSKLDVLTSFAVCSISAPIPYVRPQIL 615
Query: 516 PMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
G+GS+ L Q RHP +ELQ GV++IPND F F ++TGPNMGGKSTY+RSIGV+
Sbjct: 616 EKGSGSIELIQVRHPCMELQDGVNFIPNDAIFHKDGHRFYIITGPNMGGKSTYLRSIGVA 675
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
V +AQIGCFVP SATIS+VD I RVGA D +G+STFM EM ETA + + T++SLV
Sbjct: 676 VLMAQIGCFVPALSATISIVDAILARVGAGDCHLKGVSTFMAEMIETANITRTATKDSLV 735
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
IIDELGRGTSTFDGFG+A +IA +A QP+ LFATHFHE+ L+ +P N+ V+AL
Sbjct: 736 IIDELGRGTSTFDGFGLAWAIAEHIAVKIQPYALFATHFHELTALADEVPAVDNLHVTAL 795
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY--SLDTKTPSGD 753
++ LLY+V+PGSC +S+G+H A++ +P+++LE A+ KE E + ++ SG+
Sbjct: 796 TGDNTFTLLYRVQPGSCDQSFGLHVAELVHFPQEVLEIAQKKAKELEAIQPNNNESDSGE 855
Query: 754 ETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKDTNRILHLQE 797
T R + EG+ M +L++ + +QK +QE
Sbjct: 856 PTMKRRK---GDNAEGDTLMRTYLERAKKIMEQKKDVNCEEMQE 896
>gi|426335483|ref|XP_004029250.1| PREDICTED: DNA mismatch repair protein Msh2 [Gorilla gorilla
gorilla]
Length = 934
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 327/870 (37%), Positives = 486/870 (55%), Gaps = 106/870 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
+ SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
Query: 744 -----SLDTKTPSGDETNNREEEYFKTVQE 768
D P+ + E+ K +QE
Sbjct: 857 IGESQGYDIMEPAAKKCYLEREQGEKIIQE 886
>gi|443702178|gb|ELU00339.1| hypothetical protein CAPTEDRAFT_184281 [Capitella teleta]
Length = 848
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/751 (40%), Positives = 467/751 (62%), Gaps = 50/751 (6%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T+GV D +K + E D+D +SNLEA+IVQ PKECLLPA + KI +++R
Sbjct: 75 TLGVGYADATLRKLGVCEFADNDQFSNLEALIVQLGPKECLLPAGDSSPEMKKIQQVVER 134
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ V +T RK+ EFS +D +QD+NRL++F E +N+ LPE+ T A + +LI YL+L
Sbjct: 135 SGVLVTDRKRAEFSSKDSIQDLNRLLKFKKEEQQNSAALPELEKTHAVSSVAALIKYLDL 194
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ--QGSTSAQTYDSLLGILDRCRTP 265
+ +E + NQ+++ S D S+YV + SA + +L+++P +G S Q S+LG+L++CRT
Sbjct: 195 LADESSFNQYTLSSFDLSQYVKLDSAAVRALNLMPSPTEGGNSCQ---SVLGLLNKCRTA 251
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
QG RLLAQW+KQPL D++ I ER V + +++ E R + E L+ +PD Q L+ + R
Sbjct: 252 QGQRLLAQWLKQPLVDVNKIEERLNVVQVFMDDLELRHAIAEDQLKRIPDYQRLSKKFQR 311
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSLKMM--- 375
KKA L+DCYRVY+ + +LP L+ I+E L+ + + L +L + M
Sbjct: 312 KKATLQDCYRVYQSIDKLPLLVEIVERHEGNHKHLLMELFTNPLKELLMDFSKFQEMIEQ 371
Query: 376 -------------------DRKDAVMDKMKEY-------LESTARRLNLVADKTIKLENS 409
D+ A+ +K+ E L A+ LN+ +KT+KLE++
Sbjct: 372 TMDMEQVENHEFMVKPDFDDQLQALRNKLDELEHEIKSQLGVAAKDLNMDPNKTLKLESN 431
Query: 410 PQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
Q G+ +R+T K ++ + +YT +DT GVRF+ L N +Y ++ +Y Q+S
Sbjct: 432 AQLGYFFRVTRKDEKNLRNNKKYTTIDTKTNGVRFRSSPLRQLNDEYLGVKADYMEQQKS 491
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
++ E+I I+AGY + L+ ++DV+A DVLV+F+ S AP +VRP + G+G + L +
Sbjct: 492 VLVEIINIAAGYVEPLSLINDVIAHLDVLVAFAQVSANAPVTFVRPKLHAKGSGIIHLKE 551
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q V++IPND F+ + F+++TGPNMGGKSTYIRS+GV V +AQIGCFVP
Sbjct: 552 ARHPCLEMQDDVAFIPNDAQFEKDQAMFHIITGPNMGGKSTYIRSVGVIVLMAQIGCFVP 611
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
CD A ++VVD I RVGA DSQ +G+STFM EM ETA++++ + +SL+IIDELGRGTST
Sbjct: 612 CDEAEVTVVDCILARVGAGDSQLKGVSTFMAEMLETASILRSSSSDSLIIIDELGRGTST 671
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQ 706
+DGFG+A +I+ +A+ + F LFATHFHE+ L+ V+PT +N V+AL D L LLY+
Sbjct: 672 YDGFGLAWAISEHIATQIKAFCLFATHFHELTSLADVVPTVKNSHVTALTSNDTLTLLYK 731
Query: 707 VKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFK-- 764
VKPG C +S+G+H A++A +P+ ++E A+ E E + G E ++E K
Sbjct: 732 VKPGVCDQSFGIHVAELAHFPKQVIEFAKKKASELE-DYQNVSLQGSELEGQDEPAVKKR 790
Query: 765 --TVQEGEYQMFDFLQQCLSLSKQ-KDTNRI 792
++GE + FL++ L+ Q KD N +
Sbjct: 791 KVVREDGEQLIESFLKEVKDLASQTKDANEL 821
>gi|1079805|gb|AAA82080.1| similar to S. cerevisiae Msh2p (Swiss-Prot accession number P25847)
and bacterial MutS proteins (Swiss-Prot accession
numbers P23909, P10339, and P27345) [Homo sapiens]
Length = 887
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 326/867 (37%), Positives = 485/867 (55%), Gaps = 106/867 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
Query: 744 -----SLDTKTPSGDETNNREEEYFKT 765
D P+ + E+ F++
Sbjct: 857 IGESQGYDIMEPAAKKCYLEREKLFRS 883
>gi|119620618|gb|EAX00213.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli),
isoform CRA_a [Homo sapiens]
Length = 924
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 322/840 (38%), Positives = 476/840 (56%), Gaps = 101/840 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
>gi|380812930|gb|AFE78339.1| DNA mismatch repair protein Msh2 [Macaca mulatta]
gi|383418515|gb|AFH32471.1| DNA mismatch repair protein Msh2 [Macaca mulatta]
Length = 933
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 323/840 (38%), Positives = 478/840 (56%), Gaps = 101/840 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDPELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQRLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPND+YF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
>gi|348574690|ref|XP_003473123.1| PREDICTED: DNA mismatch repair protein Msh2-like [Cavia porcellus]
Length = 934
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/880 (37%), Positives = 491/880 (55%), Gaps = 101/880 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K +G KTL++V
Sbjct: 19 FVRFFQAMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYLGPAGAKTLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLAFKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMAASIGVVGIKMSAVDGQRQVGVGYVDSAQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RK+ EFS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRAGILITERKRAEFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +L+L++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLDLLSDDSNFGQFELTTFDFSQYMKLDIAAVKALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R +L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVHQWIKQPLMDKNRIEERLNLVEAFVEDAELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGRHQALLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
A+ L + S + M MD KM+ L
Sbjct: 437 AAPLVDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 SSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQSLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATRIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL + L +LYQVK G C +S+G+H A++A +P ++E A+ E E
Sbjct: 797 VNNLHVTALTTAETLTMLYQVKKGVCDQSFGIHVAELANFPRHVVECAKQKALELEEFQS 856
Query: 747 TKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQ 786
G N+RE K E E Q +Q+ L+ KQ
Sbjct: 857 IGASQG--CNDREPAAKKCYLERE-QGERIIQEFLTKVKQ 893
>gi|348508792|ref|XP_003441937.1| PREDICTED: DNA mismatch repair protein Msh2-like [Oreochromis
niloticus]
Length = 937
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/886 (37%), Positives = 490/886 (55%), Gaps = 110/886 (12%)
Query: 1 HKF--YLFFFPQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTL 55
H F ++F P+K TT R F+R ++Y VHG+DA + K+N V +K +G + L
Sbjct: 17 HGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKTNGV--IKYLGSGSRKL 74
Query: 56 ETVLVNK-----------------------------------------SNLSCFSHIL-- 72
E+V+++K NL+ F IL
Sbjct: 75 ESVVLSKLNFEAFAKDLLLVRQYRVEVYRNHSKSSKEHDWKIEYKASPGNLTQFEEILFG 134
Query: 73 -------C--VISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKS 123
C V++ VGV VD + + E PD++ +SNLE+++VQ S
Sbjct: 135 GGSGAEGCAGVVAVRLATGADGQRVVGVGYVDAAQRTMGVCEFPDNEIFSNLESLLVQIS 194
Query: 124 PKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNA 183
PKECLL N + +K+ ++ R + ++ RK+ EF+ +D++QD+NRL+R E +
Sbjct: 195 PKECLLAHGEANADGSKLREVVQRGGMLVSDRKRAEFNSKDMVQDLNRLLRAKRGETVAS 254
Query: 184 RLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ 243
LPE+ A CL +++ +LEL+++E N N FS+ ++D +Y+ + +A + +L++
Sbjct: 255 NTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTTLDLGQYMRLDNAAVRALNLF-- 312
Query: 244 QGSTSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
QGS T SL G+L++CRTPQG RL+ QW+KQPL D I ER V V ++ R
Sbjct: 313 QGSPDDTTGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLDLVESFVCDSVLR 372
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNL 362
+ LR PD+ LA + R A L+DCYRVY+ VSQ+P LI+ LE + +
Sbjct: 373 QTCQDDLLRRFPDLHRLAKKFHRHTATLQDCYRVYQAVSQIPTLITALERYSGSYKVLLN 432
Query: 363 NTILSSLQSLK------------------------------------MMDRKDAVMDKMK 386
LS L+ L+ + ++ D + M+
Sbjct: 433 AVFLSPLRDLQTDFTKYQEMIETTLDMNQIDHHEYLVKASFDPVLSELREKMDVLEKSMQ 492
Query: 387 EYLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQD 443
L S AR+L L A KT+KLE N+ GF R+T K S+ + +T LD + GVRF +
Sbjct: 493 AVLNSAARQLGLEAGKTVKLESNAVLGFYLRVTCKEEKSLRNNKNFTTLDVQKNGVRFTN 552
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
+L++ N QY + EYE Q +IV+E+I I++GY L LSDV+AQ D + SF++AS
Sbjct: 553 SKLSSLNEQYTKSREEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQLDAMASFAVASV 612
Query: 504 CAPKPYVRPCMKPMGTG--SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
AP P+VRP + + G + L Q RHP +E+ ++IPND+ F + SF ++TGPN
Sbjct: 613 SAPVPFVRPRFRLLDHGCRRMELLQARHPCMEMDADTAFIPNDISFVQEDKSFYIITGPN 672
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKST+IR +GV +AQIGCFVPC+ A +SV+D I RVGA DSQ +G+STFM EM E
Sbjct: 673 MGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSILARVGAGDSQVKGVSTFMSEMLE 732
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA +++ TE SL+IIDELGRGTST+DGFG+A +I+ ++S F LFATHFHE+ L+
Sbjct: 733 TAAILRSATEKSLIIIDELGRGTSTYDGFGLAWAISEHISSKIGCFCLFATHFHELTALA 792
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY 741
PT N+ V+AL + L +LY+VKPG C +S+G+H A++A +P +L A ++
Sbjct: 793 AQQPTVHNLHVTALTSHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVLAAA---KEKA 849
Query: 742 EYSLDTKTPSGDETNNREEEYFKT----VQEGEYQMFDFLQQCLSL 783
E + + P+GD + EE K Q GE + FLQ+ SL
Sbjct: 850 EELEEFQEPAGDMSEQEEEPEAKRRRTDKQVGENLIQKFLQKVKSL 895
>gi|62898129|dbj|BAD97004.1| mutS homolog 2 variant [Homo sapiens]
Length = 878
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 322/840 (38%), Positives = 476/840 (56%), Gaps = 101/840 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILGKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
>gi|55733310|emb|CAH93337.1| hypothetical protein [Pongo abelii]
Length = 886
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 322/840 (38%), Positives = 476/840 (56%), Gaps = 101/840 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
>gi|440906160|gb|ELR56461.1| DNA mismatch repair protein Msh2 [Bos grunniens mutus]
Length = 934
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 324/874 (37%), Positives = 492/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY H EDA L R+ +VK MG KTLE+V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMGPAGAKTLESV 78
Query: 59 LVNKSNLSCFSHILCVISEDKT------------------------------------LE 82
+++K N F L ++ + + +
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKFSYCGPSVAPEMPHVN 138
Query: 83 TVLTNTVGVAIVDLDT----------------KKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
L+ ++GV V + T +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 RQLSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C++P + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVMPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLKGKKGEQVNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
+ SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R NL
Sbjct: 317 VEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQNL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQALFLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMD----KMKEYL 389
++ L L+ MD+ + +MD KM+ L
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 VSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSDAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+ A +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ + F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIRAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E +
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQN 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
P DE + + ++GE + +FL +
Sbjct: 857 IGKPQECDEMEPAAKRCYLEREQGEKIIQEFLSK 890
>gi|149242571|pdb|2O8E|A Chain A, Human Mutsalpha (Msh2MSH6) BOUND TO A G T MISPAIR, WITH
ADP BOUND TO Msh2 Only
Length = 934
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 327/870 (37%), Positives = 485/870 (55%), Gaps = 106/870 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R + Y HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDAYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
Query: 744 -----SLDTKTPSGDETNNREEEYFKTVQE 768
D P+ + E+ K +QE
Sbjct: 857 IGESQGYDIMEPAAKKCYLEREQGEKIIQE 886
>gi|62897279|dbj|BAD96580.1| mutS homolog 2 variant [Homo sapiens]
Length = 878
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 321/840 (38%), Positives = 476/840 (56%), Gaps = 101/840 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + + MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEVIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
>gi|13591999|ref|NP_112320.1| DNA mismatch repair protein Msh2 [Rattus norvegicus]
gi|1709122|sp|P54275.1|MSH2_RAT RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|1103621|emb|CAA63789.1| MSH2 protein [Rattus norvegicus]
Length = 933
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/874 (37%), Positives = 491/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+ F+R +FY HGEDA L R+ ++K MG KTL+TV
Sbjct: 19 FVRFFEGMPEKPSTTVGLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKTLQTV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRHYRVEVYKNKAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKT--------LETV-LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ T L TV VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMATSIGIMGIKLSTVDGQRQVGVGDVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CILPGGETAGDMGKLRQVIQRGGILITERKRIDFSTKDIYQDLNRLLKGRKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL L++C+T QG RL++QW+KQPL D + I ER V V ++E R L
Sbjct: 317 VEDTTGSQSLAAFLNKCKTAQGQRLVSQWIKQPLMDKNRIEERLNLVEAFVEDSELRRAL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+GV QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVKQLPNVIQALEKYQGRHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMD----KMKEYL 389
++ L L+ MD+ + VMD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEKIETTLDMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + L
Sbjct: 497 ISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSEL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ N +Y + EYE Q +IV+E++ IS+GY + + ++DVLA D +VSF+ S AP
Sbjct: 557 SSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTVNDVLAHLDAVVSFAHVSNAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G +++ RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGKGRIIVKASRHACVEVQHDVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A++ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATNIGAFCMFATHFHELTALASQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKTGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQS 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
T G DET + ++GE + +FL +
Sbjct: 857 IGTSQGHDETQPAAKRRCLEREQGEKIILEFLSK 890
>gi|77736115|ref|NP_001029756.1| DNA mismatch repair protein Msh2 [Bos taurus]
gi|85701144|sp|Q3MHE4.1|MSH2_BOVIN RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|75775312|gb|AAI05269.1| MutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) [Bos
taurus]
gi|296482595|tpg|DAA24710.1| TPA: DNA mismatch repair protein Msh2 [Bos taurus]
Length = 934
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/874 (37%), Positives = 491/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY H EDA L R+ +VK MG KTLE+V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMGPAGAKTLESV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C++P + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVMPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLKGKKGEQVNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
+ SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R NL
Sbjct: 317 VEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQNL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQALFLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMD----KMKEYL 389
++ L L+ MD+ + +MD KM+ L
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 VSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSDAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+ A +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E +
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQN 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
P DE + + ++GE + +FL +
Sbjct: 857 IGKPQECDEMEPAAKRCYLEREQGEKIIQEFLSK 890
>gi|301753265|ref|XP_002912468.1| PREDICTED: DNA mismatch repair protein Msh2-like [Ailuropoda
melanoleuca]
gi|281352642|gb|EFB28226.1| hypothetical protein PANDA_000218 [Ailuropoda melanoleuca]
Length = 934
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 335/908 (36%), Positives = 501/908 (55%), Gaps = 105/908 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRK----SNVVYLVKTMGQKDKTLE 56
F FF P+K TT+R F+R +FY H EDA L R+ VV + G K TLE
Sbjct: 19 FVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKTQGVVKYIGPAGTK--TLE 76
Query: 57 TVLVNK-------------------------------------------SNLSCFSHILC 73
+V+++K NLS F IL
Sbjct: 77 SVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGSKASKENDWYLAFKASPGNLSQFEDILF 136
Query: 74 V---ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSP 124
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q P
Sbjct: 137 GNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGP 196
Query: 125 KECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNAR 184
KEC+LP + K+ ++ R + +T RK+ +F +D+ QD+NRL++ E N+
Sbjct: 197 KECVLPGGEAAGDMGKLRQVIQRGGILITERKRADFFTKDIYQDLNRLLKGKKGEPVNSA 256
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ 244
+LPEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ Q
Sbjct: 257 VLPEMENQVAASSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--Q 314
Query: 245 GSTSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
GS T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R
Sbjct: 315 GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQ 374
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQN 356
+L E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE SL+
Sbjct: 375 SLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQSLLLA 434
Query: 357 VEASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKE 387
V + L + S + M MD KM+
Sbjct: 435 VFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQS 494
Query: 388 YLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDD 444
L S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F +
Sbjct: 495 TLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNS 554
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+L + N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S
Sbjct: 555 KLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNA 614
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
AP PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGG
Sbjct: 615 APVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGG 674
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+
Sbjct: 675 KSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETAS 734
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
+++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ I
Sbjct: 735 ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQI 794
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
PT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E AR E E
Sbjct: 795 PTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECARQKALELEEF 854
Query: 745 LDTKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQC--LSLSKQKDTNRILHLQETQEP 801
+ G D+ + + ++GE + +FL + + ++ + N + L++ +
Sbjct: 855 QNIGESQGYDDMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMSEENITMKLKQLKAE 914
Query: 802 GIEEYQSF 809
I + SF
Sbjct: 915 VIAKNNSF 922
>gi|328713533|ref|XP_001949991.2| PREDICTED: DNA mismatch repair protein Msh2 [Acyrthosiphon pisum]
Length = 697
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/637 (44%), Positives = 415/637 (65%), Gaps = 43/637 (6%)
Query: 135 NDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTA 194
N + ++ +++R V +T RKK++F + L+QD+N+L+ F++ + NA LP++ L A
Sbjct: 6 NPDVEQLKKVVERCGVLVTMRKKSDFGIDTLIQDLNKLIMFEEGQQPNAHTLPQLQLEIA 65
Query: 195 THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS 254
+ + ++I YLEL ++ DN+NQ+S+ + Y K+VH+ SA + +L++ G+ S DS
Sbjct: 66 SAAVAAVIKYLELSSDSDNLNQYSVDDLGYDKFVHLDSAGVQALNLFSNSGTMSKN--DS 123
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
+LGI ++CR+P G RLL QW++QPL+DL+ I ER V LV +T+ R LH+ LR +P
Sbjct: 124 ILGIFNKCRSPHGQRLLTQWIRQPLRDLNKINERLDIVETLVTDTDIRQQLHDQHLRTIP 183
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSS------ 368
D+Q+L +I RKKA L+DCYR+Y+ + +LP L+ L N + LN+++++
Sbjct: 184 DLQALMRKIQRKKANLQDCYRIYQAIQKLPDLVQTLS----NSDDKTLNSVITTPLKELV 239
Query: 369 ------------LQSLKMMDRKDAV---------------MDKMKEYLESTARRLNLVAD 401
LK+++R + + MD + +ES + +
Sbjct: 240 NDMNKYQAMIEETIDLKLVERGEFLIQSGFDDELQEMRNQMDDYESKMESNLTKTSGALG 299
Query: 402 KTIKLE-NSPQGFAYRITMKLNNSIDDR--YTILDTVRGG-VRFQDDRLATANTQYQAIQ 457
++KL+ NS GF +++ +K ++ + Y +LDT +GG +RF+ +L NT YQ+I
Sbjct: 300 ISVKLDSNSQYGFFFKVLLKDAKTVSNNKSYEVLDTTKGGGMRFRSSKLTELNTDYQSIH 359
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+ Y HQ+SIV EVI ++ Y+ T+ LS LAQ DVL SFS+ + + +PYVRP + P
Sbjct: 360 KNYLEHQKSIVVEVIQTASSYSATILNLSRTLAQLDVLTSFSMLAASSLRPYVRPNLHPQ 419
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
GTG L L Q RHP VE+Q VSYIPND YF G+ +FN++TGPNMGGKSTYIRS+ V+VF
Sbjct: 420 GTGLLDLKQVRHPCVEVQDSVSYIPNDAYFNQGKCTFNVITGPNMGGKSTYIRSVAVAVF 479
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+A +G FVPCD+A ISVVD I RVGA DSQ +G+STFM+EM ET +++K+ T SLVII
Sbjct: 480 MAHMGSFVPCDAAEISVVDAILARVGANDSQIKGLSTFMVEMIETVSILKRATSESLVII 539
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DELGRGTST++G G+AC+IA LA + FTLFATHFHE+ L IPT N VSA+
Sbjct: 540 DELGRGTSTYEGCGIACAIAERLAVETKAFTLFATHFHELTKLHETIPTITNKHVSAVTT 599
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
+D+L LLYQV+PGSC KS+G+H A MA +P+++++ A
Sbjct: 600 DDSLTLLYQVQPGSCDKSFGIHVAAMAKFPKNVIQNA 636
>gi|332019050|gb|EGI59582.1| DNA mismatch repair protein Msh2 [Acromyrmex echinatior]
Length = 857
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/758 (40%), Positives = 464/758 (61%), Gaps = 52/758 (6%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTIL 145
+ VG++ VD+ + + E D++ +SNLE++IV +PKECLL + + ++
Sbjct: 89 SRVVGLSCVDVVSTLISVIEFQDNESFSNLESLIVTLAPKECLLIQGEGSFEFQTLKQLM 148
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
+R+ V +T RKKNEF + ++ D+N+L++F + +NA+ LPE+ L A +LI YL
Sbjct: 149 ERSNVMVTLRKKNEFVSDSIIDDLNKLIKFKKGQKQNAQSLPEVNLNLAMSATSALIKYL 208
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS---AQTYDSLLGILDRC 262
+L ++E +MNQF ++ I+ S+Y+ + SA M +L++ P + + S+L +LD+C
Sbjct: 209 DLTSDEGHMNQFKLNQIEQSRYIRLDSAAMKALNIEPHTDTIPTLHGNSVASILTLLDKC 268
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
RT QGHRL+AQW++QPLKDL I ERH V +LV N E R L + L+ +PD+Q LA +
Sbjct: 269 RTAQGHRLIAQWVRQPLKDLSLIKERHDIVELLVKNNELRSTLSDDYLKRIPDLQQLAKK 328
Query: 323 IGRKKAGLKDCYRVYEGVS------------------------QLPKLISILESLVQNVE 358
+ RKK L+DCY++Y +S L +LI ++ Q +E
Sbjct: 329 LARKKLTLQDCYKIYLCISYLPKLLEQLLLEKNVTTLNTMIIEPLKELIEDMDKFQQLIE 388
Query: 359 AS-NLNT-----------ILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKL 406
+ +L+ L++LK D D + + +++ L A L + A K IKL
Sbjct: 389 QTIDLDAAEKGDFMVNPGFADDLKTLK--DAMDELEETIQKQLSKAANDLCMEAGKMIKL 446
Query: 407 E-NSPQGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
E N G+ +RIT+K + ++ YTILD+ + GVRF++++L N + + +Y
Sbjct: 447 ECNQQLGYYFRITLKEEKILRNKKHYTILDSNKAGVRFRNNKLNELNDDFLDARNKYLER 506
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q+ ++ E++ I+AGY++T+ + VLA DVL +FS A+ A K YVRP M P G L
Sbjct: 507 QKDVIVEIVEIAAGYSETVRSIGGVLACLDVLTAFSSAAVSANKVYVRPKMVPSEEGELN 566
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L Q RHP +E+Q GV YI ND+ FK + F ++TGPNMGGKSTYIRS+GV+ +A IG
Sbjct: 567 LIQVRHPCLEMQQGVDYIANDIIFKRDQCHFYIITGPNMGGKSTYIRSVGVTALMAHIGS 626
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPCD ATIS++D I RVGA DSQ +G+STFMMEM ETA ++K T NSLVIIDELGRG
Sbjct: 627 FVPCDEATISLLDCILARVGADDSQLKGLSTFMMEMIETAAILKTATCNSLVIIDELGRG 686
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
TST++G G+A SIA LA + + + LFATHFHEI L+ IP +N V+AL ++D L L
Sbjct: 687 TSTYEGCGIAWSIAEHLARNIKSYCLFATHFHEITKLAEEIPAVKNQHVTALVEDDKLTL 746
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYF 763
LY+V PG C +S+G+H AKMA +P D++E A+ E E D + + + ++N +++
Sbjct: 747 LYKVMPGICDQSFGLHVAKMANFPSDVIEFAKRKQAELE---DYQGVTFEGSDNPQKKQ- 802
Query: 764 KTVQEGEYQMFDFLQQCL----SLSKQKDTNRILHLQE 797
K +QEGE + FL +C SLS +++L L+E
Sbjct: 803 KVIQEGEVLISQFLTKCKALDSSLSDADLESQVLSLKE 840
>gi|426223711|ref|XP_004006017.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
[Ovis aries]
Length = 935
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/876 (37%), Positives = 487/876 (55%), Gaps = 102/876 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRK----SNVVYLVKTMGQKDKTLE 56
F FF P+K TT+R F+R +FY H EDA L R+ VV V G+ KTLE
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHQEDALLAAREVFKTQGVVKXVGPTGEA-KTLE 77
Query: 57 TVLVNK-------------------------------------------SNLSCFSHILC 73
+V+++K NLS F IL
Sbjct: 78 SVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKASPGNLSQFEDILF 137
Query: 74 V---ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSP 124
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q P
Sbjct: 138 GNNDMSASIGVVGVKMSTVDGQRQVGVGYVDATQRKLGLCEFPDNDQFSNLEALLIQIGP 197
Query: 125 KECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNAR 184
KEC++P + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+
Sbjct: 198 KECVIPGGETAGDMGKLRQVIQRGGILITERKRADFSMKDIYQDLNRLLKGKKGEQMNSA 257
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ 244
+LPEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ Q
Sbjct: 258 VLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--Q 315
Query: 245 GSTSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
GS + SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R
Sbjct: 316 GSVEDTSGSQSLAALLNKCKTPQGQRLINQWIKQPLMDKNRIEERLNLVEAFVEDAELRQ 375
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+L E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +A L
Sbjct: 376 SLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQALLLA 435
Query: 364 TILSSLQSLK------------------------------------MMDRKDAVMDKMKE 387
++ L L+ + + D + KM+
Sbjct: 436 VFVTPLIDLRSDFSKFQEMIETTLDMEQVENHEFLVKPSFDPNLSELREIMDDLEKKMQS 495
Query: 388 YLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDD 444
L S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F +
Sbjct: 496 TLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNS 555
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+L + N +Y + EYE Q +IV+E++ IS+GY + + +DVLAQ D +VSF+ S
Sbjct: 556 KLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTFNDVLAQLDAVVSFAHVSNA 615
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
AP PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGG
Sbjct: 616 APVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGG 675
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR GV V +AQIGCFVPC+ A +S+VD I RVGA DSQ +G+STFM EM ETA+
Sbjct: 676 KSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETAS 735
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
+++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ I
Sbjct: 736 ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQI 795
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
PT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E
Sbjct: 796 PTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKALELEEF 855
Query: 745 LDTKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
+ P DE + + ++GE + +FL +
Sbjct: 856 QNIGKPQECDEMEPAAKRCYLEREQGEKIIQEFLSK 891
>gi|30047836|gb|AAH50897.1| MutS homolog 2 (E. coli) [Mus musculus]
Length = 935
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/874 (37%), Positives = 491/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMG-QKDKTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG KTL++V
Sbjct: 19 FVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGSKTLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENEWYLAFKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E P++D +SNLEA+++Q PKE
Sbjct: 139 NDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ L
Sbjct: 199 CVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLKGKKGEQINSAAL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+T QG RL+ QW+KQPL D + I ER V V ++E R +L
Sbjct: 317 VEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEAFVEDSELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYEGRHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMDKMKEYLEST- 392
++ L L+ MD+ + VMD +++ ++ST
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQSTL 496
Query: 393 ---ARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + L
Sbjct: 497 INAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSEL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLA D +VSF+ S AP
Sbjct: 557 SSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAHLDAIVSFAHVSNAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++ A+ E E +
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIACAKQKALELEEFQN 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
T G DE + ++GE + +FL +
Sbjct: 857 IGTSLGCDEAEPAAKRRCLEREQGEKIILEFLSK 890
>gi|6678938|ref|NP_032654.1| DNA mismatch repair protein Msh2 [Mus musculus]
gi|1171033|sp|P43247.1|MSH2_MOUSE RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|534945|emb|CAA57049.1| MSH2 [Mus musculus]
gi|28436763|gb|AAH47117.1| MutS homolog 2 (E. coli) [Mus musculus]
gi|74186106|dbj|BAE34223.1| unnamed protein product [Mus musculus]
gi|148706688|gb|EDL38635.1| mutS homolog 2 (E. coli) [Mus musculus]
Length = 935
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/874 (37%), Positives = 491/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMG-QKDKTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG KTL++V
Sbjct: 19 FVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGSKTLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENEWYLAFKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E P++D +SNLEA+++Q PKE
Sbjct: 139 NDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ L
Sbjct: 199 CVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLKGKKGEQINSAAL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+T QG RL+ QW+KQPL D + I ER V V ++E R +L
Sbjct: 317 VEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEAFVEDSELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYEGRHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMDKMKEYLEST- 392
++ L L+ MD+ + VMD +++ ++ST
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQSTL 496
Query: 393 ---ARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + L
Sbjct: 497 INAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSEL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLA D +VSF+ S AP
Sbjct: 557 SSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAHLDAIVSFAHVSNAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++ A+ E E +
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIACAKQKALELEEFQN 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
T G DE + ++GE + +FL +
Sbjct: 857 IGTSLGCDEAEPAAKRRCLEREQGEKIILEFLSK 890
>gi|196006291|ref|XP_002113012.1| hypothetical protein TRIADDRAFT_56718 [Trichoplax adhaerens]
gi|190585053|gb|EDV25122.1| hypothetical protein TRIADDRAFT_56718 [Trichoplax adhaerens]
Length = 934
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 317/870 (36%), Positives = 498/870 (57%), Gaps = 97/870 (11%)
Query: 4 YLFFFPQKSKTTIRFFNRVEFYCVHGEDAELIQ----RKSNVV-----------YLVKTM 48
+L P+K +TTIR F+R +++ VHG DA + R +V+ Y+V
Sbjct: 22 FLDSLPEKLETTIRIFDRSDWFTVHGSDAIFVANNIFRSKSVIRYYRNGNEKLEYVVLNN 81
Query: 49 GQKDKTLETVLV----------NKS----------------NLSCFSHILC---VISEDK 79
+K L +L+ NK NL CF I+ +SE
Sbjct: 82 ANYEKVLRDLLLVRQYRIELYKNKGTKTNQQWYLAEKATPGNLRCFEEIIFGNNEMSESA 141
Query: 80 ---TLETVLTN---TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
+ V+ N +GVA D + + D+D +NLEA++VQ PKEC+L +
Sbjct: 142 PVIAIRLVVENGQRIIGVAYADATLYNLGISQFEDNDLMTNLEALMVQIGPKECILVSGE 201
Query: 134 LNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
+ + K+ ++++ V +T RKK++F+++D++QD+NRL+R NA L E+
Sbjct: 202 TSVDAVKLRQVINKTGVLVTERKKSDFNDKDIVQDLNRLLRIKSG---NAATLAEIDQQV 258
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A C+ +LI YLEL++N N NQF + + D S+++ + SA + +L++ P S +
Sbjct: 259 AMSCVTALIKYLELLSNVSNFNQFDLVTFDLSQFMKLDSAAVRALNLFPSP-SDAGNKLR 317
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
L+G+L+ C+T G RLLAQW+KQPL D+ I ER V++ V++TE R ++ E L+
Sbjct: 318 CLMGVLNYCKTAPGQRLLAQWLKQPLMDIAKIEERLNLVDVFVDDTELRQSVQEDHLKRF 377
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL-------ESLVQNVEASNLNTIL 366
PD+Q LA + R +A L+DC RVY+ ++++ LI L + L++N+ ++ L+ +
Sbjct: 378 PDLQRLAKKFQRSRANLQDCVRVYQSINRVNCLIKALVGYDSAYKDLIRNMYSNPLSDLT 437
Query: 367 SSLQSLKMM-----------------------------DRKDAVMDKMKEYLESTARRLN 397
+ Q + + ++ D +++++ L AR L
Sbjct: 438 TDFQKYQELIETTVDLDSVANHEFVIKPSIDPDLQEYRNQMDDLIEQISRLLSLAARDLG 497
Query: 398 LVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQ 454
L A+K+IKLE++ Q G+ +R+T+K ++ + R+ ++DT + GVRF ++ L + N Q
Sbjct: 498 LEANKSIKLESNSQFGYYFRVTLKEEKALRSNKRFMMIDTNKHGVRFTNNNLESLNKSLQ 557
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
I+ Y+ Q+ EVI I++GY + L LS ++A DV+VSF+ AST AP PYVRP +
Sbjct: 558 EIKSMYDGKQEDFAVEVINIASGYYEPLQSLSRIIAHLDVIVSFAHASTNAPVPYVRPTI 617
Query: 515 KPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
+ L + RHP +E+Q V++IPNDV F + F ++TGPNMGGKSTYIR IGV
Sbjct: 618 LDTSDRIIELTEARHPCLEMQDDVAFIPNDVKFAKDDAEFIIITGPNMGGKSTYIRQIGV 677
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
V +AQIGCFVPC A IS++D I RVGA DSQ +G+STFM EM ET+ ++K TE SL
Sbjct: 678 IVLMAQIGCFVPCSFARISIIDCILARVGAGDSQLKGVSTFMSEMLETSYILKTATEKSL 737
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
+IIDELGRGTST+DGFG+A +I+ +A FTLFATHFHE+ L+ I + +N VSA
Sbjct: 738 IIIDELGRGTSTYDGFGLAWAISESIAKDIGAFTLFATHFHELTALANDIKSVKNFHVSA 797
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDE 754
+ E+ L LLY+VKPG C +S+G+H A++A +PE+++ A++ + E + +
Sbjct: 798 MTTEEALTLLYRVKPGVCDQSFGIHVAELAHFPENVVTHAKERAADLENCQAISYVTESD 857
Query: 755 TNNREEEYFKTVQEGEYQMFDFLQQCLSLS 784
++ R + ++EGE + DFLQ+ +S
Sbjct: 858 SDRRRD----IMEEGEGLIHDFLQKISQIS 883
>gi|73969550|ref|XP_538482.2| PREDICTED: DNA mismatch repair protein Msh2 isoform 1 [Canis lupus
familiaris]
Length = 934
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 331/906 (36%), Positives = 503/906 (55%), Gaps = 101/906 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY H EDA L R+ ++K +G KTLE+V
Sbjct: 19 FVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKTQGVIKYLGPAGTKTLESV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLIRQYRVEVYKNRAGSKASKENDWYLAFKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ T V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSTSIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +F +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQDLNRLLKGKKGEQVNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N Q+ + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAASALSAVIKFLELLSDDSNFGQYELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R +L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE + L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRALEKYEGKHQGLLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMD----KMKEYL 389
++ L L+ MD+ + +MD KM+ L
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E +
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQN 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQC--LSLSKQKDTNRILHLQETQEPGI 803
G DE + + ++GE + +FL + + ++ + N + L++ + I
Sbjct: 857 IGGSQGYDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMSEENITMKLKQLKAEVI 916
Query: 804 EEYQSF 809
+ SF
Sbjct: 917 AKNNSF 922
>gi|726086|gb|AAA75027.1| MutS homolog 2 [Mus musculus]
Length = 935
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 324/874 (37%), Positives = 491/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMG-QKDKTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG KTL++V
Sbjct: 19 FVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGSKTLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENEWYLAFKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E P++D +SNLEA+++Q PKE
Sbjct: 139 NDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ L
Sbjct: 199 CVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLKGKKGEQINSAAL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+T QG RL+ QW+KQPL D + I ER V V ++E R +L
Sbjct: 317 VEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEAFVEDSELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYEGRHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMDKMKEYLEST- 392
++ L L+ MD+ + VMD +++ ++ST
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQSTL 496
Query: 393 ---ARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + L
Sbjct: 497 INAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSEL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLA D +VSF+ S AP
Sbjct: 557 SSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAHLDAIVSFAHVSNAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ET++++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETSSIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++ A+ E E +
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIACAKQKALELEEFQN 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
T G DE + ++GE + +FL +
Sbjct: 857 IGTSLGCDEAEPAAKRRCLEREQGEKIILEFLSK 890
>gi|355704522|gb|AES02255.1| mutS-like protein 2, colon cancer, nonpolyposis type 1 [Mustela
putorius furo]
Length = 934
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 332/908 (36%), Positives = 501/908 (55%), Gaps = 105/908 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRK----SNVVYLVKTMGQKDKTLE 56
F FF P+K TT+R F+R +FY H EDA L R+ V+ + G K TLE
Sbjct: 19 FVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKTQGVIKYIGPAGTK--TLE 76
Query: 57 TVLVNK-------------------------------------------SNLSCFSHILC 73
+V+++K NLS F IL
Sbjct: 77 SVVLSKMNFESFVRDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKASPGNLSQFEDILF 136
Query: 74 V---ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSP 124
+S + + +TV GV VD +K + E PD+D +SNLEA+++Q P
Sbjct: 137 GNNDMSASIGVVGIKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGP 196
Query: 125 KECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNAR 184
KEC+LP + K+ ++ R + +T RK+ +F +D+ QD+NRL++ E N+
Sbjct: 197 KECVLPGGETAGDIGKLRQVIQRGGILITERKRADFLTKDIYQDLNRLLKGKKGEQVNSA 256
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ 244
+LPEM A L ++I +L+L+++E N QF + D+S+Y+ + A + +L++ Q
Sbjct: 257 VLPEMENQVAASSLSAVIKFLDLLSDESNFGQFELTMFDFSQYMKLDIAAVRALNLF--Q 314
Query: 245 GSTSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
GS T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R
Sbjct: 315 GSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLLDKNRIEERLNLVEAFVEDAELRQ 374
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQN 356
+L E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE SL+
Sbjct: 375 SLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRALEKYEGKHQSLLLA 434
Query: 357 VEASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKE 387
+ + L + S + M MD KM+
Sbjct: 435 IFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQS 494
Query: 388 YLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDD 444
L S AR L L K IKL+++ Q G+ +R+T K + + ++ +D + GV+F +
Sbjct: 495 TLVSAARDLGLDPGKQIKLDSNAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNS 554
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+L + N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S
Sbjct: 555 KLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNG 614
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
AP PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGG
Sbjct: 615 APVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGG 674
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR GV V +AQIGCFVPC+SA IS+VD I RVGA DSQ +G+STFM EM ETA+
Sbjct: 675 KSTYIRQTGVVVLMAQIGCFVPCESAEISIVDCILARVGAGDSQLKGVSTFMAEMLETAS 734
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
+++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ I
Sbjct: 735 ILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANHI 794
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
PT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E AR E E
Sbjct: 795 PTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECARQKALELEEF 854
Query: 745 LDTKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQC--LSLSKQKDTNRILHLQETQEP 801
+ G D+T + + ++GE + +FL + + ++ + N + L++ +
Sbjct: 855 QNIGGSQGYDDTEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMSEENITMKLKQLKAE 914
Query: 802 GIEEYQSF 809
+ + SF
Sbjct: 915 VVAKNNSF 922
>gi|195397830|ref|XP_002057531.1| GJ18185 [Drosophila virilis]
gi|194141185|gb|EDW57604.1| GJ18185 [Drosophila virilis]
Length = 918
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 310/822 (37%), Positives = 473/822 (57%), Gaps = 92/822 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHGED-----AELIQRKSNVVYLVKTMGQKDKTLETVLVNKSN 64
+K ++T+RF+++ + Y VHG D A+++ + + V+ + K +TL+ V ++K+N
Sbjct: 33 EKPRSTVRFYDQTDCYTVHGSDDCEQVAKIVYKSTAYVHPLLP-DDKQETLQYVAMSKAN 91
Query: 65 LSC-----------------------------------FSHIL----------CVISEDK 79
F IL +IS
Sbjct: 92 FELAVRDLLLVRNLRVEVYVRRTEWQLEYRGSPGNLLQFEDILFANKEVLVGNTIISLQV 151
Query: 80 TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
LE VGVA V+ + F + E DDD+++ LEA +V PKECLLP+ +
Sbjct: 152 KLEGGTQRRVGVAAVEQNDCSFQLLEFVDDDFFTELEATVVLLGPKECLLPSA--DGEYT 209
Query: 140 KIVTILDRNKVCMTGRKKNEFSEE-DLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCL 198
+ T+L+RN V +T K+ +E DL+QD+NRL+RF + ++A E+ + A L
Sbjct: 210 AVKTLLERNGVMITVPKRGSAAERNDLLQDLNRLLRFAKGQQEDANGRKELQMQLAAEAL 269
Query: 199 RSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS---TSAQTYDSL 255
R I YL+L+N+ N+ + + +D ++VH+ SA +++L+++P+ G+ + + S+
Sbjct: 270 RVAIRYLDLINDAGNLGHYELKQLDLKRFVHLDSAAVAALNIMPKPGTHPTMPSYRWQSI 329
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
LG+LD CRTPQGHRL+AQW+KQPL+ + + +RH V L+ + E L L+ +PD
Sbjct: 330 LGVLDHCRTPQGHRLMAQWVKQPLRSSEILNDRHNIVQCLLESPETLDTLSMDYLKRIPD 389
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTILSSLQS 371
+ L ++ R+KA L+D +R+Y+ + + PK++ +L SL VQ+V + + L L
Sbjct: 390 ILMLTKKLMRRKASLQDLFRIYQVILRTPKILQLLLSLEHSTVQSVLCAPFKSFLEDLTG 449
Query: 372 LKMM----------------------DRKDAVMDKMKEYLESTARRLNLVAD------KT 403
LK M +R + M E R N + K
Sbjct: 450 LKQMVEQVVDFESIEKGEYLVKSTFDNRLMELQQTMTELYNKMERLQNKCCEELDLDGKM 509
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+KLEN + G+ R T+K ++ + + Y I+D ++GGVRF D+L + ++ + + Y
Sbjct: 510 VKLENVAKLGYHLRTTIKDDSVLRKNKNYRIVDVIKGGVRFTSDKLESYADEFASCRTRY 569
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E QQSIVEE+I ++ GY L L++ LAQ D LVSF+IA+ CAP PYVRP M G G
Sbjct: 570 EEQQQSIVEEIIQVAVGYAAPLTSLNNELAQLDCLVSFAIAARCAPTPYVRPKMLAEGAG 629
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L+L RHP +ELQ VS+I N V F+ + + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 630 KLLLEDVRHPCLELQEHVSFIANSVAFEKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAH 689
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ TE SLVIIDEL
Sbjct: 690 VGAFVPCSMATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATEKSLVIIDEL 749
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ +PT +NV ++A+ EDN
Sbjct: 750 GRGTSTYEGCGIAWSIAEHLAKQTKCFTLFATHFHEITKLAETLPTVKNVHMAAVADEDN 809
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+PG KS+G+ A++A +PE +++ A+++ E+E
Sbjct: 810 FTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFE 851
>gi|410954733|ref|XP_003984016.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
[Felis catus]
Length = 934
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 322/836 (38%), Positives = 472/836 (56%), Gaps = 98/836 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY H EDA L R+ +VK +G KTLE+V
Sbjct: 19 FVRFFQTMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKTQGVVKYIGPPGTKTLESV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +F +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQVIQRGGILITERKRGDFFTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAASSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMRLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R +L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQRLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 VSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTXNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKALELE 852
>gi|384871702|ref|NP_001245210.1| DNA mismatch repair protein Msh2 isoform 2 [Homo sapiens]
gi|194385858|dbj|BAG65304.1| unnamed protein product [Homo sapiens]
Length = 868
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 295/728 (40%), Positives = 438/728 (60%), Gaps = 50/728 (6%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
VGV VD +K + E PD+D +SNLEA+++Q PKEC+LP + K+ I+ R
Sbjct: 95 VGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRG 154
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RKK +FS +D+ QD+NRL++ E N+ +LPEM A L ++I +LEL+
Sbjct: 155 GILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELL 214
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT-YDSLLGILDRCRTPQG 267
+++ N QF + + D+S+Y+ + A + +L++ QGS T SL +L++C+TPQG
Sbjct: 215 SDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGSVEDTTGSQSLAALLNKCKTPQG 272
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RL+ QW+KQPL D + I ER V V + E R L E LR PD+ LA + R+
Sbjct: 273 QRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQA 332
Query: 328 AGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSLKMMDRKDA 380
A L+DCYR+Y+G++QLP +I LE L+ V + L + S + M
Sbjct: 333 ANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL 392
Query: 381 VMD-----------------------------KMKEYLESTARRLNLVADKTIKLENSPQ 411
MD KM+ L S AR L L K IKL++S Q
Sbjct: 393 DMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQ 452
Query: 412 -GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
G+ +R+T K + + ++ +D + GV+F + +L + N +Y + EYE Q +IV
Sbjct: 453 FGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIV 512
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+E++ IS+GY + + L+DVLAQ D +VSF+ S AP PYVRP + G G ++L R
Sbjct: 513 KEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASR 572
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
H VE+Q +++IPNDVYF+ + F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+
Sbjct: 573 HACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCE 632
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
SA +S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+IIDELGRGTST+D
Sbjct: 633 SAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYD 692
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
GFG+A +I+ +A+ F +FATHFHE+ L+ IPT N+ V+AL E+ L +LYQVK
Sbjct: 693 GFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVK 752
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY-----SLDTKTPSGDETNNREE 760
G C +S+G+H A++A +P+ ++E A+ ++E++Y D P+ + E
Sbjct: 753 KGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLERE 812
Query: 761 EYFKTVQE 768
+ K +QE
Sbjct: 813 QGEKIIQE 820
>gi|195033817|ref|XP_001988769.1| GH11346 [Drosophila grimshawi]
gi|193904769|gb|EDW03636.1| GH11346 [Drosophila grimshawi]
Length = 918
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 310/825 (37%), Positives = 472/825 (57%), Gaps = 98/825 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHGEDAELIQRKSNVVYLVKTMG--------QKDKTLETVLVN 61
+K +T+RF++ + Y VHG D ++ + +VY K+M K +TL+ V ++
Sbjct: 33 EKPSSTVRFYDHTDCYTVHGGDD--CEQVAKIVY--KSMAYVHPLLKEDKKETLQYVAMS 88
Query: 62 KSNLSC-----------------------------------FSHIL----------CVIS 76
KSN F IL +IS
Sbjct: 89 KSNFELAVRDLLLVRNLRVEVYVKREEWQLEYRGSPGNLLQFEDILFANKEVLVGNSIIS 148
Query: 77 EDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLND 136
LE VGVA V+ + F + E DDD+++ LEA +V PKECLLP+ +
Sbjct: 149 LQVKLEGGTMRRVGVAAVEQNDCTFQLLEFVDDDFFTELEATVVLLGPKECLLPSA--DG 206
Query: 137 NKNKIVTILDRNKVCMTGRKKNEFSEE-DLMQDVNRLVRFDDSELKNARLLPEMCLTTAT 195
+ +L+RN V +T K++ +E DL+QD+NRL+RF + ++A L E+ + A
Sbjct: 207 EYTAVKALLERNGVMITLPKRSSAAERNDLLQDLNRLLRFAKGQQEDANGLKELQMQLAA 266
Query: 196 HCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS---TSAQTY 252
LR I YL+L+N+ N+ + + +D ++VH+ SA +++L+++P+ G+ + +
Sbjct: 267 EALRVAIKYLDLVNDAGNLGHYEMRQLDLKRFVHLDSAAVAALNIMPKPGTHPTMPSYRW 326
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
S+LG+LD CRTPQGHRL++QW+KQPL+ LD + +RH V L+ E L L+
Sbjct: 327 QSILGVLDHCRTPQGHRLMSQWVKQPLRSLDILNDRHNIVQCLLEAPETLDTLSLDFLKR 386
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEASNLNTILSS 368
+PD+ L ++ R+KA L+D +RVY+ + + PK++ +L S VQ+V + + + L
Sbjct: 387 IPDILMLTKKLMRRKASLQDLFRVYQVILRTPKILQLLLDLEHSTVQSVLCAPIKSFLED 446
Query: 369 LQSLKMM---------------------DRKDAVMDKMKEYLESTARRLNL-------VA 400
L LK M D + + + L S RL +
Sbjct: 447 LTGLKQMVEQVVDFEAIEKGEYLVKGSFDSRLMELQQTMTELYSKMERLQRKCCDELDLD 506
Query: 401 DKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
K IKLEN + G+ +R T+K ++ + + Y I+D ++GGVRF D+L + ++ + +
Sbjct: 507 SKLIKLENVAKLGYHFRTTLKDDSVLRKNKNYRIVDVIKGGVRFTSDKLESYADEFASCR 566
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
YE QQSIV+E+I ++ GY L L++ LAQ D LVSF+ A+ CAP PYVRP M P
Sbjct: 567 TRYEEQQQSIVDEIIQVAVGYAAPLTSLNNELAQLDCLVSFATAARCAPTPYVRPKMLPE 626
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
G G L+L RHP +ELQ VS+I N V F+ + + ++TGPNMGGKSTYIRS+G +V
Sbjct: 627 GAGQLLLEDVRHPCLELQEHVSFIANSVAFEKDKCNMFIITGPNMGGKSTYIRSVGTAVL 686
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+A +G FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVII
Sbjct: 687 MAHVGAFVPCSVATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVII 746
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DELGRGTST++G G+A SIA LA + FTLFATHFHEI L+ +PT +N ++A+
Sbjct: 747 DELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLPTVKNCHMAAVAD 806
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+DN LLYQV+ G KS+G+ A++A +PE +++ A+++ E+E
Sbjct: 807 KDNFTLLYQVRAGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFE 851
>gi|344245098|gb|EGW01202.1| DNA mismatch repair protein Msh2 [Cricetulus griseus]
Length = 852
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 292/733 (39%), Positives = 438/733 (59%), Gaps = 44/733 (6%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
VGV VD +K + E PD+D +SNLEA+++Q PKEC+LP + K+ ++ R
Sbjct: 79 VGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRG 138
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RK+ +FS +D+ QD+NRL++ E N+ +LPEM A L ++I +LEL+
Sbjct: 139 GILITERKRADFSTKDICQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELL 198
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT-YDSLLGILDRCRTPQG 267
+++ N QF + + D+ +Y+ + A + +L++ QGS T SL +L++C+T QG
Sbjct: 199 SDDSNFGQFELTTFDFRQYMRLDMAAVRALNLF--QGSVEDTTGSQSLAALLNKCKTAQG 256
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RL+ QW+KQPL D + I ER V V ++E R L E LR PD+ LA + R+
Sbjct: 257 QRLVNQWIKQPLMDKNRIEERLNLVETFVEDSELRQTLQEDLLRRFPDLNRLAKKFQRQA 316
Query: 328 AGLKDCYRVYEGVSQLPKLISIL-------ESLVQNVEASNLNTILSSLQSLKMM----- 375
A L+DCYR+Y+GV+QLP +I L ++L+ V + L + S + M
Sbjct: 317 ANLQDCYRLYQGVNQLPSVIQALKKYQGRHQALLMAVFVTPLIDLRSDFSKFQEMIETTL 376
Query: 376 ------------------------DRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQ 411
+ D + KM+ L S AR L L K IKL++S Q
Sbjct: 377 DMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQ 436
Query: 412 -GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
G+ +R+T K + + ++ +D + GV+F + L++ N +Y + EYE Q +IV
Sbjct: 437 FGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIV 496
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+E++ IS+GY + + L+DVLAQ D +VSF+ S AP PYVRP + G G +VL R
Sbjct: 497 KEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIVLKASR 556
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
H VE+Q V++IPNDV F+ + F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+
Sbjct: 557 HACVEIQDEVAFIPNDVCFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCE 616
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
SA +S++D I RVGA DSQ +G+STFM EM ETA +++ T++SL+IIDELGRGTST+D
Sbjct: 617 SAEVSILDCILARVGAGDSQLKGVSTFMAEMLETAAILRSATKDSLIIIDELGRGTSTYD 676
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
GFG+A +I+ +A+ F +FATHFHE+ L+ IPT N+ V+AL E+ L +LYQVK
Sbjct: 677 GFGLAWAISEYIATKIGAFCMFATHFHELTALASQIPTVNNLHVTALTSEETLTMLYQVK 736
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE--YSLDTKTPSGDETNNREEEYFKTV 766
G C +S+G+H A++A +P ++E AR E E S+ T E ++ +
Sbjct: 737 KGVCDQSFGIHVAELANFPRHVVECARQKALELEEFQSIGTSQGRDGEMEPPAKKCYLER 796
Query: 767 QEGEYQMFDFLQQ 779
++GE + +FL +
Sbjct: 797 EQGEKIIMEFLSK 809
>gi|326432823|gb|EGD78393.1| MSH2-Ex5 isoform [Salpingoeca sp. ATCC 50818]
Length = 904
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 319/893 (35%), Positives = 479/893 (53%), Gaps = 112/893 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDA---------------------------- 32
F FF P+K TTIRFF+R ++Y +HG+DA
Sbjct: 12 FCRFFQSLPEKPATTIRFFDRNDYYTLHGDDALFMAKTVFKTMGVVKHWGPQKLPSVNMS 71
Query: 33 ---------ELIQRKSNVVYLVKTMGQKDKTLETVL-VNKSNLSCFSHIL--------CV 74
+L+ K+ V + T G K E V + N F IL +
Sbjct: 72 HMVFENTVKDLLLIKNYRVQVYSTKGNKSGKWELVKKASPGNTQMFEDILYAGGVNSSSI 131
Query: 75 ISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
+ K VG+A D+ + + E D+D +SNLEA++VQ +ECL+ ++
Sbjct: 132 VMAVKLATEGQERVVGLAFCDVTANELRVCEFVDNDQFSNLEALVVQVGARECLITSDKS 191
Query: 135 NDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTA 194
N K+ +++R V +T RK++EF +D+ QD+ RL++ +D + LP++ A
Sbjct: 192 NPALAKVAQVVERCNVMVTQRKRSEFQHKDIEQDLGRLLKLEDDQ--TVSTLPQIDKKHA 249
Query: 195 THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS 254
C+ ++I YLEL++N++N N+F + ++ +Y+ + +A + +L + P G Q S
Sbjct: 250 MDCVNAVIKYLELLSNDENFNRFFLLEFNFKQYMRLDAAAVRALSMFPTMGD-GGQKSQS 308
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
L G+L+RC+T QG RLL QW+KQPL D+ I ERH V+IL ++ E R L + LR P
Sbjct: 309 LFGLLNRCKTAQGQRLLQQWLKQPLLDVAKIAERHNVVDILTHDDEMRTGLID-VLRRFP 367
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------------ 350
D+ L+ + RKKA L+DC + Y+ V ++PKL ++L
Sbjct: 368 DLNRLSKKFMRKKAQLQDCVQAYDAVLKIPKLTALLSEYHGEHAPLLKALFLDDLADLAV 427
Query: 351 ---------ESLVQNVEASNLNTILS-----SLQSLKMMDRKDAVMDKMKEYLESTARRL 396
E + E N ++ +QS + DR D + ++ L + L
Sbjct: 428 DFAKYKELIEKTIDLAEVDNHQYLIKPSFNEDMQSAR--DRMDELQGQLPAVLSKASADL 485
Query: 397 NLVADKTIKLENSPQG--FAYRITM----KLNNSIDDRYTILDTVRGGVRFQDDRLATAN 450
L A KT+KLE + F +R++ KL S +Y IL+T++ GV+F + RL T N
Sbjct: 486 GLDAQKTVKLERDSKTNQFHFRVSRTHEKKLRGS--RQYEILETLKNGVKFVNKRLKTIN 543
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
+Y +Y Q+ + +V+ +++GY ++ L+ V A DV VSF++A AP PYV
Sbjct: 544 EEYVGCYEQYLRIQEEVARKVVEVASGYATPMDDLNCVSAHLDVYVSFAVAGIEAPIPYV 603
Query: 511 RPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
+P M PMG G LVL CRHP VE+Q V++I NDV ++TGPNMGGKSTYIR
Sbjct: 604 KPTMTPMGEGDLVLRGCRHPCVEVQDDVNFIANDVRMNRKTAELQIITGPNMGGKSTYIR 663
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
IG++V LAQIGCFVP A+I V D + RVGA DSQ +GISTFM EM ETA+++K T
Sbjct: 664 QIGIAVLLAQIGCFVPAQEASICVCDSVLARVGAGDSQLKGISTFMAEMLETASILKSAT 723
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNV 690
NSLVIIDELGRGTST+DGFG+A +I+ +A H F LFATHFHE+ +S +P N+
Sbjct: 724 ANSLVIIDELGRGTSTYDGFGLAWAISEHVAKHIHCFCLFATHFHELTAMSSELPNVTNL 783
Query: 691 QVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY-EYSLDTKT 749
V A+ L LLY++KPG C +S+G+H A++A +PE +++ A+D E E++ D
Sbjct: 784 HVDAMTSNGALTLLYKIKPGVCDRSFGIHVAELADFPEQVVQMAKDKAAELEEFAQDG-- 841
Query: 750 PSGDETNNREEEYFKT--------VQEGEYQMFDFLQQCLSLSKQKDTNRILH 794
+ DE N E E +T E E + F++ + ++D +L+
Sbjct: 842 -NDDEEANDEGEGQETPTKRAKLSANEKERALLSFVKHAAQIDLERDPVAVLN 893
>gi|198420769|ref|XP_002126892.1| PREDICTED: similar to DNA mismatch repair protein MSH2 [Ciona
intestinalis]
Length = 944
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 336/919 (36%), Positives = 505/919 (54%), Gaps = 131/919 (14%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKSN 64
P+K+ T R F+ EFY H +DA+L + KS+ VK +G+KD + TV +++ N
Sbjct: 25 LPEKADATYRVFDHGEFYSSHSKDADLAAKHIFKSSTA--VKELGKKDAKVPTVFLSQLN 82
Query: 65 LSCFSHIL-------------------------------------------------CVI 75
+ L VI
Sbjct: 83 FESLARDLLLVMQYRLEVYRQLSNRKWELAYKASPGNLNEVEDILFKNVDIGDQTSSAVI 142
Query: 76 SEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLN 135
S TL +TVG+A VD + + E D+D++SNLE+ I+Q PKEC++P +
Sbjct: 143 SVKYTLAAGGQSTVGLAYVDTRSCEVMYAEFSDNDHFSNLESAIIQLGPKECIVPKLDTS 202
Query: 136 DNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTAT 195
+K+ ++ R+ + +T R K++FS +DL QD+ RL++ + + +P T+
Sbjct: 203 HEASKLSEVIKRSGLLITERPKSDFSTKDLAQDLKRLIKTKKKQ-SDQDEVPVGASWTSD 261
Query: 196 HCL-----RSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ---QG-S 246
H L SLI YLELM+ E+N +F I + S+Y+ + SA S+L++ P+ QG +
Sbjct: 262 HPLASSSLSSLIRYLELMSKEENFGEFRIRKFELSQYMKLDSAAYSALNLFPERTAQGVA 321
Query: 247 TSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLH 306
+++ DSL G+L+ C+T QG RLL++W+KQPL D++ + ER + V V+ +E R +L
Sbjct: 322 QNSKPVDSLYGLLNYCQTVQGQRLLSRWIKQPLIDVNILEERLSIVEAFVDCSELRRSLV 381
Query: 307 EYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEA--SNLN- 363
+ L+ LPD L+ + RKKA L+D YRVY+ + Q+P + ES+ ++ EA +N N
Sbjct: 382 DEHLKKLPDFDRLSKKFHRKKATLQDSYRVYQAIKQMP---YVCESIGRHAEALENNYNL 438
Query: 364 ---TILSSLQSLKM------------MDRK------------------------DAVMDK 384
T L+ + L + +D K D + ++
Sbjct: 439 LRETFLNPIHQLSLDFEKFTEMLETTLDFKLIEKHEFMVKCDFDPELKRLRVKMDDIEEE 498
Query: 385 MKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRF 441
M E A +L L K+IKLE +PQ G+ +R+T K S+ + ++T LDT + GVRF
Sbjct: 499 MNESFTQAADQLGLEKGKSIKLELAPQFGYVFRVTCKEEKSLRQNKKFTTLDTNKAGVRF 558
Query: 442 QDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIA 501
+ +L + YQ + YE Q ++V E++ I+ GY + + L DV+A+ DVL+SF+ A
Sbjct: 559 VNTQLQQLSDDYQDCRAAYEAQQDAVVMEIMTIACGYAEPMRSLGDVIAKLDVLLSFAQA 618
Query: 502 STCAPKPYVRPCMKPMGTGS--LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTG 559
+ AP PYVRP ++P+GTGS + L+QCRHP VE Q VS+IPND+ K E +F +VTG
Sbjct: 619 AVTAPTPYVRPVLQPLGTGSNLIKLDQCRHPCVERQDDVSFIPNDLLLKKNEHNFIIVTG 678
Query: 560 PNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEM 619
PNMGGKSTYIR IGV+V +AQIGCFVPC AT+++VD I RVGA D Q +G+STFM EM
Sbjct: 679 PNMGGKSTYIRQIGVAVLMAQIGCFVPCGGATVTLVDAILARVGAGDCQAQGVSTFMAEM 738
Query: 620 KETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIAL 679
ET+++++ T NSL+IIDELGRGTST+DGFG+A +I+R +A + LFATHFHE+
Sbjct: 739 LETSSILRSATSNSLIIIDELGRGTSTYDGFGLAWAISRHVALEIRAACLFATHFHEMTS 798
Query: 680 LSRVIPTFRNVQVSALEQ-----EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
L+ + + N V+AL + ++ +LYQVKPGSC KS+G+H A+ +P ++ A
Sbjct: 799 LADEVTSAVNYHVTALTSSNENVDSHITMLYQVKPGSCDKSFGIHVAECVDFPLSVINAA 858
Query: 735 RDLMKEYE--YSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFL-----QQCLSLSKQK 787
+ E E Y DT D R KT +GE + DFL +Q LS+ +
Sbjct: 859 KRKAAELEDCYVTDTSKEDDDGRKRR-----KTKSDGEEIVRDFLRAVKREQWNKLSESE 913
Query: 788 DTNRILHLQETQEPGIEEY 806
+ L+ T EY
Sbjct: 914 ACAKFSELKRTVASSDNEY 932
>gi|355565679|gb|EHH22108.1| hypothetical protein EGK_05309 [Macaca mulatta]
Length = 962
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 333/934 (35%), Positives = 502/934 (53%), Gaps = 129/934 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLN-----------------------------LVADKTIKLENSPQ-GFAYRITM 419
S AR L L K IKL++S Q G+ +R+T
Sbjct: 497 ISAARDLGRHETSVNMCKMYIGSNRKGRTTRSKGLSGLDPGKQIKLDSSTQFGYYFRVTC 556
Query: 420 KLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
K + + ++ +D + GV+F + +L + N +Y + EYE Q +IV+E++ IS+G
Sbjct: 557 KEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSG 616
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGG 537
Y + + L+DVLAQ D +VSF+ S AP PYVRP + G G ++L RH VE+Q
Sbjct: 617 YVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDE 676
Query: 538 VSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQ 597
+++IPND+YF+ + F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+SA +S+VD
Sbjct: 677 ITFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDC 736
Query: 598 IFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIA 657
I RVGA DSQ +G+STFM EM ETA++++ T++SL+IIDELGRGTST+DGFG+A +I+
Sbjct: 737 ILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIS 796
Query: 658 RELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYG 717
+A+ F +FATHFHE+ L+ IPT N+ V+AL E+ L +LYQVK G C +S+G
Sbjct: 797 EYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFG 856
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFL 777
+H A++A +P+ ++E A+ E E G + ++ + ++GE + +FL
Sbjct: 857 IHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDMEPAAKKCYLEREQGEKIIQEFL 916
Query: 778 QQC--LSLSKQKDTNRILHLQETQEPGIEEYQSF 809
+ + ++ + N + L++ + I + SF
Sbjct: 917 SKVKQMPFTEMSEENITIKLKQLKAEVIAKNNSF 950
>gi|402890841|ref|XP_003908682.1| PREDICTED: DNA mismatch repair protein Msh2 [Papio anubis]
Length = 851
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 288/698 (41%), Positives = 428/698 (61%), Gaps = 45/698 (6%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
VGV VD +K + E PD+D +SNLEA+++Q PKEC+LP + K+ I+ R
Sbjct: 79 VGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRG 138
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RKK +FS +D+ QD+NRL++ E N+ +LPEM A L ++I +LEL+
Sbjct: 139 GILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELL 198
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT-YDSLLGILDRCRTPQG 267
+++ N QF + + D+S+Y+ + A + +L++ QGS T SL +L++C+TPQG
Sbjct: 199 SDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGSVEDTTGSQSLAALLNKCKTPQG 256
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RL+ QW+KQPL D + I ER V V + E R L E LR PD+ LA + R+
Sbjct: 257 QRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQA 316
Query: 328 AGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSLKMMDRKDA 380
A L+DCYR+Y+G++QLP +I LE L+ V + L + S + M
Sbjct: 317 ANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTL 376
Query: 381 VMD-----------------------------KMKEYLESTARRLNLVADKTIKLENSPQ 411
MD KM+ L S AR L L K IKL++S Q
Sbjct: 377 DMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQ 436
Query: 412 -GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
G+ +R+T K + + ++ +D + GV+F + +L + N +Y + EYE Q +IV
Sbjct: 437 FGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIV 496
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+E++ IS+GY + + L+DVLAQ D +VSF+ S AP PYVRP + G G ++L R
Sbjct: 497 KEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASR 556
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
H VE+Q +++IPND+YF+ + F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+
Sbjct: 557 HACVEVQDEITFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCE 616
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
SA +S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+IIDELGRGTST+D
Sbjct: 617 SAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYD 676
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
GFG+A +I+ +A+ F +FATHFHE+ L+ IPT N+ V+AL E+ L +LYQVK
Sbjct: 677 GFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVK 736
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 737 KGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 774
>gi|198473172|ref|XP_001356195.2| GA18039 [Drosophila pseudoobscura pseudoobscura]
gi|198139335|gb|EAL33255.2| GA18039 [Drosophila pseudoobscura pseudoobscura]
Length = 914
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 311/822 (37%), Positives = 476/822 (57%), Gaps = 96/822 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELIQR--KSNVVYLVKTMGQKDKTLETVLVNKSNLS 66
+K TT+RF++ + Y V+G +D EL+ + + ++ + +TL+ V ++K N
Sbjct: 33 EKPSTTVRFYDHSDCYTVNGSDDCELVAKIVYKSTAFIGALLPDDKETLQFVALSKGNFE 92
Query: 67 C-----------------------------------FSHILC----------VISEDKTL 81
F IL +IS L
Sbjct: 93 MAVRELLLVRNLRVEVYVKRNEWQLEYRGSPGNLLQFEDILFANKEVLVGNNMISLQVKL 152
Query: 82 ETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA---EYLNDNK 138
E VGVA V+ + +F + E DDD+++ LEA +V PKECLLP+ EY+
Sbjct: 153 EGGAQRRVGVASVEQNDCQFQLLEFLDDDFFTELEATVVLLGPKECLLPSVEGEYV---- 208
Query: 139 NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCL 198
+ +L+RN V +T KK+ S DL+QD+NRL+RF + ++A L E+ + A+ L
Sbjct: 209 -PVKALLERNGVMITVPKKS--SANDLLQDLNRLLRFAKGQQEDATGLKELQMLLASESL 265
Query: 199 RSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSL 255
+ I YL+L+N+ N+ + I +D ++VH+ SA + +L+++P+ G S + + S+
Sbjct: 266 KVAIKYLDLVNDAGNLGHYEIKQLDLKRFVHLDSAAVGALNIMPKPGTHPSMPSYRWQSI 325
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
LG+LD CRTPQGHRL+ +W+KQPL+ + + +RH V L+ +++ +L L+ +PD
Sbjct: 326 LGVLDHCRTPQGHRLMGKWVKQPLRSQEILNDRHNIVECLLESSDTLESLSLDYLKRIPD 385
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTILSSLQS 371
+ L ++ R+KA L+D +R+Y+ + + PK++ +L SL V++V S + L L
Sbjct: 386 ILMLTKKLMRRKATLQDLFRIYQVILRTPKIVQVLLSLENSTVESVICSPFKSFLEDLTG 445
Query: 372 LKMM----------DRKDAV---------------MDKMKEYLESTARRLNLVAD---KT 403
LK M +R + + M+++ + +E + N D K
Sbjct: 446 LKQMVEQVVDFEAIERGEYLVKSSFDSRLMELQQTMNELYDKMERLKSKCNDELDLDSKQ 505
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
IKLEN + G+ +R T+K ++ + + Y I+D ++GGVRF D+L ++ + Y
Sbjct: 506 IKLENVAKLGYHFRTTLKDDSVLRKNKNYRIVDVIKGGVRFTSDKLEGYADEFASCHSRY 565
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E Q SIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP PYVRP M G G
Sbjct: 566 EEQQLSIVEEIIQVAVGYAAPLTSLNNELAQLDCLVSFAIAARSAPTPYVRPNMLAEGAG 625
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LVL RHP +ELQ VS+I N VYFK + + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 626 KLVLTDVRHPCLELQEHVSFIANSVYFKKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAH 685
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDEL
Sbjct: 686 VGAFVPCGMATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDEL 745
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ +PT +N ++AL DN
Sbjct: 746 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLPTVKNCHMAALADADN 805
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+PG KS+G+ A++A +PED+++ A+++ E+E
Sbjct: 806 FTLLYQVRPGVMEKSFGIQVARLANFPEDVVQNAQEVYNEFE 847
>gi|158299376|ref|XP_319476.4| AGAP010282-PA [Anopheles gambiae str. PEST]
gi|157014335|gb|EAA14192.4| AGAP010282-PA [Anopheles gambiae str. PEST]
Length = 881
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 314/834 (37%), Positives = 471/834 (56%), Gaps = 109/834 (13%)
Query: 10 QKSKTTIRFFNRVEFYCVHGEDAELIQR----KSNVVYLVKTMGQKDKTLETVLVNKSNL 65
+K TT+R F+R ++Y HG DA + + SN + K M ++ L V ++K+N
Sbjct: 29 EKPATTVRIFDRTDYYSCHGVDAAFVAKTLFKSSNAI---KIMEVDNQQLPYVSLSKNNF 85
Query: 66 SCFSHILCVISEDKT----------------------------LETVLTNT--------- 88
L ++ + E VL N
Sbjct: 86 EGLIRDLLLVRNYRIEVYSKESKRKHENDWSIQYKGSPGNLAHFEDVLFNNNNEMVIGSA 145
Query: 89 --------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP---A 131
+G+ ++++ ++ + E DDD+Y+ LEA+IV PKECLLP A
Sbjct: 146 LIALHIRHESKQRMIGLGFIEVNERRMAVIEFVDDDFYTELEALIVVTGPKECLLPSVAA 205
Query: 132 EYLNDNKNKIVTILDRNKVCMTGRKKNEFSEE--DLMQDVNRLVRFDDSELKNARLLPEM 189
EY ++ I+ RN V +T RK EF ++ D++ +N+L+RF + + NA +PE+
Sbjct: 206 EY-----ERVEQIMKRNNVIVTTRKVKEFMKDKVDVIDSLNKLLRFREGQHPNANTIPEV 260
Query: 190 CLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST-- 247
+ A L ++NYLEL N QF + S+D +++VH+ +A +S+L++ P G++
Sbjct: 261 SKSLALSALGVILNYLELTQEPGNHGQFRLESLDANRFVHLDAAAVSALNLFPNPGTSVK 320
Query: 248 -SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLH 306
+A + S+LG+LDRCRTPQGHRL+AQWMKQPL+D + I +RH V VNNT R L+
Sbjct: 321 SNAYRWQSVLGVLDRCRTPQGHRLMAQWMKQPLQDYEIIKDRHDIVEYFVNNTIVRSELY 380
Query: 307 EYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-VQNVEASN--LN 363
+ L+ LPD+ + R+ R+KA L+D +R+Y+ + ++P+++++LE+ ++++ N N
Sbjct: 381 DNHLKKLPDIMFVLKRLLRRKASLQDIFRLYQVILRVPRMLTLLETNDLESIAVLNNIYN 440
Query: 364 TILSSLQSLKMM--------------------------------DRKDAVMDKMKEYLES 391
I SL LK+ + D V KMK +L +
Sbjct: 441 PIKDSLNDLKLFKSMVEQIIDLQAVEHGEYLVKADFDSQLKKRKEEMDEVYSKMKHHLST 500
Query: 392 TARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLAT 448
A+ + L A +IKLE S G+ +RIT+K I ++ Y ILD V+GGVRF +L
Sbjct: 501 VAKDIGLDAGSSIKLEFVSQHGYHFRITLKDETLIRKNNSYRILDAVKGGVRFITTKLQD 560
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+ + ++ YE QQ+IV EVI ++ GY + L+ +A D LVSF+++++ AP P
Sbjct: 561 YSESFATLKIAYEEQQQTIVAEVIRVAVGYVEPWTMLNSQIAYLDCLVSFAVSASTAPIP 620
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
YVRP M G L L Q RHP +ELQ V+YI ND F + E S ++TGPNMGGKSTY
Sbjct: 621 YVRPKMYREGPSVLKLIQVRHPCLELQEDVNYIANDAMFDAKETSTYIITGPNMGGKSTY 680
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IRS+GV+V +A IG FVPC+SA +S+ D I RVGA D+ +G+STFM+EM ETA +I++
Sbjct: 681 IRSVGVTVLMAHIGSFVPCESAEMSIFDCILGRVGADDNFTKGLSTFMVEMIETAGIIRR 740
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR 688
T+ SLVIIDELGRGTST++G G+A SIA LA + FTLFATHF EI L+ + +
Sbjct: 741 ATDRSLVIIDELGRGTSTYEGCGIAWSIAEWLAKESKCFTLFATHFQEITDLASYVENVK 800
Query: 689 NVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
N + A+ + L LLYQVKPG KS+G+ AK+A +P +++ A+ E E
Sbjct: 801 NCHMQAIVDGECLTLLYQVKPGVMEKSFGIQVAKLANFPPGVIKLAQKFYNECE 854
>gi|390357843|ref|XP_003729116.1| PREDICTED: DNA mismatch repair protein Msh2 [Strongylocentrotus
purpuratus]
Length = 929
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/816 (37%), Positives = 463/816 (56%), Gaps = 95/816 (11%)
Query: 19 FNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLVNK--------------- 62
F R ++Y VHG+DA R+ + ++K +G E+V+++K
Sbjct: 35 FIRQDYYTVHGQDAVFAAREVFKTLGVIKHLGSGANKTESVVLSKMNFESVVRDLLLVRQ 94
Query: 63 -------------------------SNLSCFSHILCVISEDKTLETVLT---------NT 88
NL+ F IL ++ + +V+
Sbjct: 95 YRVEVYSNQATGKANNWTLAYKASPGNLTQFEEILFGNNDMSSSASVMAVKVTGESGQRL 154
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ + E D+D +SNLEA++VQ P+ECLLP+ +N +K+ ++
Sbjct: 155 VGVGYADATLRELGVSEFADNDQFSNLEALMVQLGPRECLLPSGGDPNNPEFSKLRQVVQ 214
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFD-DSELKNARLLPEMCLTTATHCLRSLINYL 205
R V +T RKK +F+ +D++QD+NRL++ + E N+ LPEM T A + +LI Y+
Sbjct: 215 RGGVLITDRKKVDFTTKDIIQDLNRLLKVGRNVEQVNSAALPEMEKTNAMGSVSALIKYM 274
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
EL+ +E N QF + + D S+Y+ + +A + +L++ + SL +L++C+T
Sbjct: 275 ELLGDETNFGQFKLTTFDLSQYMKLDAAAVRALNLTSTEDINGGM---SLTSLLNKCKTA 331
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
QG RLL QW+KQPL D ER V N+ E R L E L+ +PD Q LA + R
Sbjct: 332 QGQRLLGQWVKQPLLDKTYAEERLDMVETFFNDLELRQTLQEEPLKRVPDFQRLAKKFQR 391
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSLKMM--- 375
K+A L+DCY+VY+ V LP LI ILE L++ ++ L +L + M
Sbjct: 392 KRATLQDCYKVYQAVDYLPNLIEILEKHEGDKAHLLREHFSNPLTEMLMDFSKFQEMVET 451
Query: 376 --------------------------DRKDAVMDKMKEYLESTARRLNLVADKTIKLE-N 408
+ D + D +K + AR L L A+KT+KLE N
Sbjct: 452 TLDLQQVENHEFLIKPDFDENLMVLRTKMDELEDDLKTQINRAARDLGLEANKTVKLESN 511
Query: 409 SPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
+ G+ +R+T K ++ + +Y+ +DT + GVRF + +L N ++ A + EY Q++
Sbjct: 512 NMLGYFFRVTRKEEKALRNNSKYSTIDTNKNGVRFTNSKLRGLNDEHMAAKEEYNETQKA 571
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V+E+IGI++GY + + ++D+ AQ DVLVSF+ S AP YVRP + G G L L Q
Sbjct: 572 VVDEIIGIASGYVEPMLSMNDITAQLDVLVSFAHVSAGAPISYVRPTLHAQGEGLLHLVQ 631
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+ V++IPN+V F + F+++TGPNMGGKST+IR +GV V +AQIGCFVP
Sbjct: 632 SRHPCLEMLDDVAFIPNNVTFDKDKQMFHIITGPNMGGKSTFIRQVGVIVLMAQIGCFVP 691
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
CD+A IS+VD I RVGA D Q +G+STFM EM ETA++++ T NSL+IIDELGRGTST
Sbjct: 692 CDTAEISIVDCILARVGAGDCQLKGVSTFMAEMLETASILRSATSNSLIIIDELGRGTST 751
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQ 706
+DGFG+A +I+ +AS F LFATHFHE+ L+ VIPT N+ V+AL + L LLY+
Sbjct: 752 YDGFGLAWAISEYIASKICGFCLFATHFHELTALADVIPTVNNLHVTALTSDGQLTLLYK 811
Query: 707 VKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
VKPG C +S+G+H A++A +P+ +++ AR+ E E
Sbjct: 812 VKPGVCDQSFGIHVAELAHFPQKVIDFAREKAAELE 847
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 538 VSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
V++IPN+V F + F+++TGPNMGGKST+IR
Sbjct: 5 VAFIPNNVTFDKDKQMFHIITGPNMGGKSTFIR 37
>gi|195115750|ref|XP_002002419.1| GI12901 [Drosophila mojavensis]
gi|193912994|gb|EDW11861.1| GI12901 [Drosophila mojavensis]
Length = 919
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 310/823 (37%), Positives = 473/823 (57%), Gaps = 94/823 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHGED-----AELIQRKSNVVYLVKTMGQKDKTLETVLVNK-- 62
+K TT+RF+++ + Y VHG D A+++ + + V+ + K +TL+ V ++K
Sbjct: 33 EKPSTTVRFYDQTDCYTVHGSDDCEQVAKIVYKSTAYVHKLLP-DDKQETLQFVAMSKPN 91
Query: 63 ---------------------------------SNLSCFSHIL----------CVISEDK 79
NL F IL +IS
Sbjct: 92 FELAVRELLLVRNLRVEVYVKRDDWQLEYRGSPGNLLQFEDILFANKEVLVGNSIISLQI 151
Query: 80 TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
LE VGVA V+ + +F + E DDD+++ LEA +V PKECLLP +
Sbjct: 152 KLEGGAQRRVGVAAVEQNDCQFQLFEFVDDDFFTELEATVVLLGPKECLLPTA--DGEYA 209
Query: 140 KIVTILDRNKVCMTGRKKNEFSEE-DLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCL 198
+ +L+RN V +T K+ +E DL+QD+NRL+RF + ++A L E+ + A L
Sbjct: 210 AVKAMLERNGVMITVPKRGNAAERNDLLQDLNRLLRFAKGQQEDASGLKELQMQLAAEAL 269
Query: 199 RSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSL 255
R INYL+L+N+ N+ + + +D ++VH+ SA +++L+++P+ G S + + S+
Sbjct: 270 RVAINYLDLVNDAGNLGHYELKQLDLKRFVHLDSAAVAALNIIPKPGTHPSMPSYRWQSI 329
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
LG+LD CRTPQGHRL+AQW+KQPL+ + + +RH V L+ + E L L+ +PD
Sbjct: 330 LGVLDHCRTPQGHRLMAQWVKQPLRSAEILNDRHDIVQCLLESPETLDTLSLDYLKRIPD 389
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTILSSLQS 371
+ L ++ R+KA L+D +R+Y+ + + PK++ +L SL VQ+V + L L
Sbjct: 390 ILMLTKKLMRRKANLQDLFRIYQVILRTPKILQLLLSLGHSTVQSVLCAPFKGFLEDLTG 449
Query: 372 LK--------------------------MMDRKDAVMD---KMKEYLESTARRLNLVADK 402
LK +MD + + + KM+ + + L+L K
Sbjct: 450 LKQMVEQVVDFEAIEKGEYLVKSTFDGRLMDLQQTMTELYNKMERIRDKCSEELDLDG-K 508
Query: 403 TIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQRE 459
IKLEN + G+ R T+K ++ + + + I+D ++GGVRF D+L ++ +++
Sbjct: 509 LIKLENVAKLGYHLRTTIKDDSVLRKNKNFRIVDVIKGGVRFTSDKLEGYADEFTSLRAR 568
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
YE QQSIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP PYVRP M P G
Sbjct: 569 YEEQQQSIVEEIIQVAVGYAAPLTSLNNELAQLDCLVSFAIAARSAPTPYVRPKMLPEGA 628
Query: 520 GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
G L+L RHP +ELQ VS+I N V F+ + + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 629 GQLLLEDVRHPCLELQEHVSFIANSVEFEKDKCNMFIITGPNMGGKSTYIRSVGTAVLMA 688
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
+G FVPC A IS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDE
Sbjct: 689 HVGAFVPCSLAKISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDE 748
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGTST++G G+A SIA LA + FTLFATHFHEI L+ + T +N ++A+ ED
Sbjct: 749 LGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLSTVKNCHMAAVADED 808
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
N LLYQV+PG KS+G+ A++A +PE ++ A+++ E+E
Sbjct: 809 NFTLLYQVRPGVMEKSFGIQVARLANFPEQVVHNAQEVYNEFE 851
>gi|355751300|gb|EHH55555.1| hypothetical protein EGM_04786 [Macaca fascicularis]
Length = 962
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 332/934 (35%), Positives = 502/934 (53%), Gaps = 129/934 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ + QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSSFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLN-----------------------------LVADKTIKLENSPQ-GFAYRITM 419
S AR L L K IKL++S Q G+ +R+T
Sbjct: 497 ISAARDLGRHETSVNMCKMYIGSNRKGRTTRSKGLSGLDPGKQIKLDSSTQFGYYFRVTC 556
Query: 420 KLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
K + + ++ +D + GV+F + +L + N +Y + EYE Q +IV+E++ IS+G
Sbjct: 557 KEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSG 616
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGG 537
Y + + L+DVLAQ D +VSF+ S AP PYVRP + G G ++L RH VE+Q
Sbjct: 617 YVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDE 676
Query: 538 VSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQ 597
+++IPND+YF+ + F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+SA +S+VD
Sbjct: 677 ITFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDC 736
Query: 598 IFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIA 657
I RVGA DSQ +G+STFM EM ETA++++ T++SL+IIDELGRGTST+DGFG+A +I+
Sbjct: 737 ILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIS 796
Query: 658 RELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYG 717
+A+ F +FATHFHE+ L+ IPT N+ V+AL E+ L +LYQVK G C +S+G
Sbjct: 797 EYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFG 856
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFL 777
+H A++A +P+ ++E A+ E E G + ++ + ++GE + +FL
Sbjct: 857 IHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDMEPAAKKCYLEREQGEKIIQEFL 916
Query: 778 QQC--LSLSKQKDTNRILHLQETQEPGIEEYQSF 809
+ + ++ + N + L++ + I + SF
Sbjct: 917 SKVKQMPFTEMSEENITIKLKQLKAEVIAKNNSF 950
>gi|194758569|ref|XP_001961534.1| GF14885 [Drosophila ananassae]
gi|190615231|gb|EDV30755.1| GF14885 [Drosophila ananassae]
Length = 917
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 310/822 (37%), Positives = 471/822 (57%), Gaps = 93/822 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKSNL 65
+K +T+RFF+ + Y VHG +D EL+ + KS K +TL+ V ++K+N
Sbjct: 33 EKPSSTVRFFDHSDCYTVHGSDDCELVAKVVYKSTAYVGALIPDDKKETLQFVSLSKNNF 92
Query: 66 SC------------------------------------FSHIL----------CVISEDK 79
F IL +IS
Sbjct: 93 ELAVRELLLVRNLRVEVFVKQATDWKLEYRGSPGNLLQFEDILFANKEVLVGNSIISLLV 152
Query: 80 TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
LE VGVA V+ + +F + E DDD+++ LEA +V PKECLLP+ L+
Sbjct: 153 KLEGGAQRRVGVASVEQNDCQFQLLEFLDDDFFTELEATVVLLGPKECLLPS--LDGEYA 210
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
+ T+L+RN V +T KK+ S DL+QD+NRL+RF + ++A L E+ L A+ L+
Sbjct: 211 AVKTLLERNGVMITVPKKS--SANDLIQDLNRLLRFAKGQQEDATGLKELQLQLASDALK 268
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSLL 256
I YL+L+N+ N+ + + +D ++VH+ SA +++L+++P+ G S + + S+L
Sbjct: 269 VAIKYLDLVNDPGNLGHYELKQLDLKRFVHLDSAAVAALNIMPKPGTHPSMPSYRWQSIL 328
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+LD CRTPQGHRL+ QW+KQPL+ + + +RH V L+ + L L+ +PD+
Sbjct: 329 GVLDHCRTPQGHRLMGQWVKQPLRRREILTDRHNVVECLLEAPDTLETLSLDYLKRIPDI 388
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEASNLNTILSSLQSL 372
L ++ R+KA L+D +R+Y+ + + PK++ +L S V+++ + + L L L
Sbjct: 389 LMLTKKLMRRKATLQDLFRIYQVILRTPKILKVLFELENSTVESMICAPFKSFLEDLTGL 448
Query: 373 KMM----------DRKDAVM-------------------DKMKEYLESTARRLNLVADKT 403
K M +R + ++ KM+ + LNL +
Sbjct: 449 KQMVEQVVDFEAIERGEYLVKASFDSRLMELQQTMTELYSKMERLQTKCSEELNLDGKQQ 508
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+KLEN + G +RIT+K ++ + + Y I+D ++GGVRF D+L + ++ + + Y
Sbjct: 509 VKLENVAKLGHHFRITLKDDSVLRKNKNYRIVDVIKGGVRFTSDKLESYAEEFGSCRTRY 568
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E Q SIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP PYVRP M G G
Sbjct: 569 EEQQLSIVEEIIQVAVGYAAPLTSLNNELAQLDCLVSFAIAARSAPIPYVRPKMLEEGAG 628
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LVL RHP +ELQ VS+I N V FK + + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 629 QLVLEDVRHPCLELQEHVSFIANSVEFKKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAH 688
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVPC SATI++VD I RVGA+D+ +G+STFM+EM ET+ +I+ TE SLVIIDEL
Sbjct: 689 VGAFVPCSSATITMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATEKSLVIIDEL 748
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ + T +N ++A+ DN
Sbjct: 749 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAESLATVKNCHMAAVADADN 808
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+PG KS+G+ A++A +PE +++ A+++ E+E
Sbjct: 809 FTLLYQVRPGVMEKSFGIQVARLASFPEHVVQNAQEVYNEFE 850
>gi|238859677|ref|NP_001154964.1| mutS homolog 2 [Nasonia vitripennis]
Length = 919
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 326/869 (37%), Positives = 482/869 (55%), Gaps = 97/869 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKDKTLETVL 59
F FF P+K +TIRFFNR ++Y +HG DA Q + K +G + ++ V+
Sbjct: 19 FVRFFKSLPEKPSSTIRFFNRSDYYTLHGSDALFAAQEVFKTTSVCKKIGPEHNKIDGVI 78
Query: 60 VNKSNLSCFSHILCVISEDKT---------------------------LETVLTN----- 87
+NK+N F L ++ + + E +L N
Sbjct: 79 LNKNNFETFVRDLLLVKQYRVEVYVNRGSHKNQDWIVEYKGSPGNLAQFEDMLFNNSEVA 138
Query: 88 -----------------TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
VG+ +D+ + E DD+ + +LE I+V PKEC+L
Sbjct: 139 VEAGVIAVKFSAEASSKVVGICCIDVIKSSIAVSEFKDDESFMDLEGIVVSLKPKECILQ 198
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
+ N + + +++RN V +T RKK EFS + L+ D+N ++RFD + +N++ L +
Sbjct: 199 SGESNPDFKAVKELMERNNVLVTPRKKAEFSTDSLITDLNVILRFDKGQQRNSQALSQTN 258
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS-- 248
+ A +LI YL L+ + + +QF++ I+ S+Y+ + +A + +L+V P+ + +
Sbjct: 259 MQLAMPATAALIRYLNLVEDRGSADQFTLEEIERSRYLRLDAAAIKALNVEPRPDAPTFG 318
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
S+LG+LD+CRT QG RLLAQW++QPLKDL I ERH V ++N+ L E
Sbjct: 319 NAATSSILGLLDKCRTAQGRRLLAQWIRQPLKDLALIKERHEVVGTFLDNSALSTELSED 378
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASN-----LN 363
LR +PD+Q LA ++ +KKAGL +CY++Y+ ++ LP LI L S+ N L
Sbjct: 379 FLRRVPDLQQLAKKLAKKKAGLYECYKIYQCMTNLPGLIEKLNSVSDNAAVKTMLLDPLK 438
Query: 364 TILSSLQSLKMM----------DRKD---------------AVMD----KMKEYLESTAR 394
L + + M D+ D +VMD KMK L A
Sbjct: 439 EYLEEMDKFQQMAEQTIDLDAADKGDFLVKPEFDDELKELKSVMDSNEAKMKSLLSRAAD 498
Query: 395 RLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANT 451
L + A K+IKLE +PQ G+ +RIT+K S+ + YTILD+++GGVRF++ +L N
Sbjct: 499 DLGMEAGKSIKLETTPQYGYHFRITLKEEKSLRNNKSYTILDSIKGGVRFRNKKLEDLND 558
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
Y Y + Q++IV E++ + GY T+ ++ V+A DVL SF++A+ A YVR
Sbjct: 559 VYATAYDSYTSQQKNIVAEIVNTAGGYVPTIKMIAGVIATLDVLNSFAMAAATALTTYVR 618
Query: 512 PCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
P M P L L Q RHP +E+Q GV+YI NDV+F + F++VTGPNMGGKSTYIRS
Sbjct: 619 PEMLPSEEQVLHLVQARHPCLEMQEGVNYIANDVHFTKDD-RFHIVTGPNMGGKSTYIRS 677
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
IGV+ +A IG FVPC ATISV+D I R+GA DSQ +G+STFM EM ET+ +I+ T
Sbjct: 678 IGVTALMAHIGSFVPCTKATISVLDSILARIGADDSQIKGLSTFMAEMVETSAIIRTATV 737
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
NSLVIIDELGRGTST+DG G+A +IA LA + + LFATHFHEI L+ + T N
Sbjct: 738 NSLVIIDELGRGTSTYDGCGIAWAIAEHLAKEVKAYCLFATHFHEITRLAEDVSTASNYH 797
Query: 692 VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
V+A+ D L LLY+VKPG C +S+G+H AKMA +PE+++E A+ E E
Sbjct: 798 VTAMVG-DKLTLLYKVKPGICDQSFGIHVAKMADFPEEVIEFAKQKQTELEDLQGIVFEG 856
Query: 752 GDETNNREEEYFKTVQEGEYQMFDFLQQC 780
D+ ++E + GE + +F+ +C
Sbjct: 857 SDDPEKKKE----IINNGEQIIREFMNKC 881
>gi|195474019|ref|XP_002089289.1| GE19033 [Drosophila yakuba]
gi|194175390|gb|EDW89001.1| GE19033 [Drosophila yakuba]
Length = 917
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 310/822 (37%), Positives = 471/822 (57%), Gaps = 93/822 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKSNL 65
+K TT+RFF+ + Y VHG +D EL+ + KS K +TL+ V ++K N
Sbjct: 33 EKPGTTVRFFDHSDCYTVHGNDDCELVAKIVYKSTAYIGALLPEDKKETLQFVSMSKGNF 92
Query: 66 SC------------------------------------FSHIL----------CVISEDK 79
F IL +IS
Sbjct: 93 ELAVRELLLVRNYRVEVYVKKSSDWEIEYRGSPGNLLQFEDILFANKEVLVGNSIISLLV 152
Query: 80 TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
LE VGVA V+ + KF + E DDD+++ LEA +V PKECLLP+ ++ +
Sbjct: 153 KLEGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEATVVLLGPKECLLPS--VDGDYA 210
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
+ T+L+RN V +T KK+ S DL+QD+NRL+RF + ++A L E+ L A++ L+
Sbjct: 211 AVKTLLERNGVMITVPKKS--SANDLLQDLNRLLRFAKGQQEDATGLKELQLQLASNALK 268
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSLL 256
S I YL+L+N+ N+ + I +D ++VH+ SA +++L+++P+ G S + + S++
Sbjct: 269 SAIKYLDLVNDAGNLGHYEIKQLDLKRFVHLDSAAVAALNIMPKPGTHPSMPSYRWQSVM 328
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+LD CRTPQGHRL+ QW+KQPL+ D + +RH V L+ + + L L+ +PD+
Sbjct: 329 GVLDHCRTPQGHRLMGQWVKQPLRSRDILNDRHNIVQCLLESPDTMETLSLDYLKRIPDI 388
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEASNLNTILSSLQSL 372
L ++ R+KA L+D +R+Y+ + + PK++ +L S +++V + + L L L
Sbjct: 389 LMLTKKLMRRKANLQDLFRIYQVILRTPKILKVLLELGNSTIESVICAPFKSFLEDLTGL 448
Query: 373 KMM----------DRKDAVM-------------------DKMKEYLESTARRLNLVADKT 403
K M +R + ++ KM+ + L+L
Sbjct: 449 KQMVEQVVDFEAIERGEYLVKASFDSRLMELQQTMTELYSKMENLQVKCTQELDLDGKSQ 508
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+KLEN + G +RIT+K ++ + + Y I+D ++GGVRF D+L ++ + + Y
Sbjct: 509 VKLENVAKLGHHFRITLKDDSVLRKNKNYRIVDVIKGGVRFTSDKLEGYADEFASCRTRY 568
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E Q SIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP PYVRP M G
Sbjct: 569 EEQQLSIVEEIIQVAVGYAAPLTSLNNELAQLDCLVSFAIAARSAPTPYVRPQMLEEGAR 628
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LVL RHP +ELQ VS+I N V FK + + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 629 ELVLQDVRHPCLELQEHVSFIANSVDFKKEKCNMFIITGPNMGGKSTYIRSVGTAVLMAH 688
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDEL
Sbjct: 689 VGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDEL 748
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ +PT +N ++A+ DN
Sbjct: 749 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLPTVKNCHMAAVADADN 808
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+PG KS+G+ A++A +P+ +++ A+++ E+E
Sbjct: 809 FTLLYQVRPGVMEKSFGIQVARLANFPDHVVQNAQEVYNEFE 850
>gi|344291835|ref|XP_003417635.1| PREDICTED: DNA mismatch repair protein Msh2-like [Loxodonta
africana]
Length = 916
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 298/732 (40%), Positives = 446/732 (60%), Gaps = 43/732 (5%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
VGV VD +K + E PD+D +SNLEA++VQ PKEC+LP + K+ I+ R
Sbjct: 143 VGVGYVDSIQRKLGLCEFPDNDQFSNLEALLVQIGPKECVLPGGETTGDMGKLRQIILRG 202
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RK+ EFS +D+ QD+NRL++ E N+ +LPEM A L ++I +LEL+
Sbjct: 203 GILITDRKRAEFSAKDIYQDLNRLLKAKKGEQMNSAVLPEMENQVAVASLSAVIKFLELL 262
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT-YDSLLGILDRCRTPQG 267
+++ N QF + + D+++Y+ + A + +L++ QGS T SL G+L++C+TPQG
Sbjct: 263 SDDSNFGQFELTTFDFNQYMKLDIAAVRALNLF--QGSLEDTTGSQSLAGLLNKCKTPQG 320
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RL+ QW+KQPL D + I ER V V + E R L E LR PD+ LA + R+
Sbjct: 321 QRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQILQEDLLRRFPDLNRLAKKFQRQA 380
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKM------------- 374
A L++CY+VY+GV+QLP +I LE ++ L ++ L L+
Sbjct: 381 ANLQNCYQVYQGVNQLPNVIQALEKYEGKHQSLLLAIFVTPLVDLRSDFSKFQEMIETTL 440
Query: 375 -MDRKD------------------AVMDKMKEYLEST----ARRLNLVADKTIKLENSPQ 411
MD+ + VMD +++ ++ST AR L L K IKL++S Q
Sbjct: 441 DMDQVENHEFLVKPSFDPNLTELREVMDDLEKKMQSTLTGAARDLGLEPGKQIKLDSSAQ 500
Query: 412 -GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
G+ +R+T K + + +TI+D + GV+F + +L + N +Y + EYE Q +IV
Sbjct: 501 FGYYFRVTCKEEKVLRNNKNFTIVDIQKNGVKFANSKLTSLNEEYTKNKTEYEEAQNAIV 560
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+E+I IS+GY + + L+DVLAQ D +VSF+ S AP YVRP + G G ++L R
Sbjct: 561 KEIINISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVAYVRPVILEKGRGRILLTASR 620
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
H VE+Q V++IPNDV+F+ + F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+
Sbjct: 621 HACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCE 680
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
SA +S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+IIDELGRGTST+D
Sbjct: 681 SAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYD 740
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
GFG+A +I+ +A+ F +FATHFHE+ L+ IPT N+ V+AL E+ L +LYQVK
Sbjct: 741 GFGLAWAISEYIATRIGAFCMFATHFHELTALADQIPTVNNLHVTALTTEETLTMLYQVK 800
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY-EYSLDTKTPSGDETNNREEEYFKTVQ 767
G C +S+G+H A++A +P ++E A+ E E+ K+ ET + + +
Sbjct: 801 KGVCDQSFGIHVAELASFPRHVIECAKQKALELEEFQNIGKSQDYGETEPAAKRCYLERE 860
Query: 768 EGEYQMFDFLQQ 779
+GE + +FL +
Sbjct: 861 QGEKIIQEFLSK 872
>gi|194857041|ref|XP_001968883.1| GG25117 [Drosophila erecta]
gi|190660750|gb|EDV57942.1| GG25117 [Drosophila erecta]
Length = 917
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 310/822 (37%), Positives = 472/822 (57%), Gaps = 93/822 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKSNL 65
+K TT+RFF+ + Y VHG +D EL+ + KS K +TL+ V ++K+N
Sbjct: 33 EKPGTTVRFFDHSDCYTVHGNDDCELVAKIVYKSTAYIGALLPEDKKETLQFVSMSKANF 92
Query: 66 SC------------------------------------FSHIL----------CVISEDK 79
F IL +IS
Sbjct: 93 ELAVRELLLVRNYRVEVYVKKSSDWEIEYRGSPGNLLQFEDILFANKEVLIGNSIISLLV 152
Query: 80 TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
LE VGVA V+ + KF + E DDD+++ LEA +V PKECLLP+ L +
Sbjct: 153 KLEGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEATVVLLGPKECLLPS--LEGDYA 210
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
+ T+L+RN V +T KK+ S DL+QD+NRL+RF + ++A L E+ L A++ L+
Sbjct: 211 AVKTLLERNGVMVTVPKKS--SANDLLQDLNRLLRFAKGQQEDATGLKELQLQLASNALK 268
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSLL 256
+ I YL+L+N+ N+ + I +D ++VH+ SA +++L+++P+ G S + + S++
Sbjct: 269 TAIKYLDLVNDAGNLGHYEIKQLDLKRFVHLDSAAVAALNIMPKPGTYPSMPSYRWQSIM 328
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+LD CRTPQGHRL+ QW+KQPL+ D + +RH V L+ + + L L+ +PD+
Sbjct: 329 GVLDHCRTPQGHRLMGQWVKQPLRSRDILNDRHNIVQCLLESPDTMETLSLDYLKRIPDI 388
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEASNLNTILSSLQSL 372
L ++ R+KA L+D +R+Y+ + + PK++ +L S +++V + + L L L
Sbjct: 389 LMLTKKLMRRKASLQDLFRIYQVILRTPKILKVLLELGNSTIESVICAPFKSFLEDLTGL 448
Query: 373 KMM----------DRKDAVM-------------------DKMKEYLESTARRLNLVADKT 403
K M +R + ++ KM++ L L+L
Sbjct: 449 KEMVEQVVDFEAIERGEYLVKASFDSRLMELQQMMTELYSKMEKLLAKCTGDLDLDGKSQ 508
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+KLE + G +RIT+K ++ + + Y I+D ++GGVRF D+L + ++ + + Y
Sbjct: 509 VKLETIAKLGHHFRITLKDDSVLRKNKNYRIVDVIKGGVRFTSDKLEGYSDEFASCRTRY 568
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E Q SIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP PYVRP M G
Sbjct: 569 EEQQLSIVEEIIQVAVGYAAPLTSLNNELAQLDCLVSFAIAARSAPTPYVRPKMLEEGAR 628
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LVL RHP +ELQ VS+I N V FK + + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 629 ELVLQDVRHPCLELQEHVSFIANSVDFKKEKCNMFIITGPNMGGKSTYIRSVGAAVLMAH 688
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDEL
Sbjct: 689 VGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDEL 748
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ +PT +N ++A+ D+
Sbjct: 749 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLADTLPTVKNCHMAAVADADH 808
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+PG KS+G+ A++A +PE +++ A+++ E+E
Sbjct: 809 FTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFE 850
>gi|675456|gb|AAA62406.1| Spellchecker1, partial [Drosophila melanogaster]
Length = 913
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 308/822 (37%), Positives = 475/822 (57%), Gaps = 93/822 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKSNL 65
+K TT+RFF+ + Y VHG +D EL+ + KS K +TL+ V ++K N
Sbjct: 29 EKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGALLPDDKKETLQFVSMSKGNF 88
Query: 66 SCFSHILCVI-----------SEDKTLE--------------------TVLTNT------ 88
L ++ S D +E ++ N+
Sbjct: 89 ELAVRELLLVRNYRVEVYVKNSSDWEIEYRGSPGNLLQFEDILFSNKEVLVGNSIISLLV 148
Query: 89 ---------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
VGVA V+ + KF + E DDD+++ LEA +V PKECLLP+ + +
Sbjct: 149 KLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEATVVLLGPKECLLPS--IEGEYS 206
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
+ T+LDRN V +T KK+ + DL+QD+NRL+RF + ++A L E+ L A++ L+
Sbjct: 207 AVKTLLDRNGVMITMPKKS--GDNDLLQDLNRLLRFAKGQQEDATGLKELQLQLASNALK 264
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSLL 256
+ I YL+L+N+ N+ + I +D +++VH+ SA +++L+++P+ G S + + S+L
Sbjct: 265 TAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLDSAAVAALNIMPKPGTHPSMPSYRWQSVL 324
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+LD CRTPQGHRL+ QW+KQPL+ + + +RH V L+ + + L L+ +PD+
Sbjct: 325 GVLDHCRTPQGHRLMGQWVKQPLRSRNILNDRHNIVQCLLESPDTMETLSLDYLKRIPDI 384
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTILSSLQSL 372
L ++ R+KA L+D +R+Y+ + + PK++ +L L +++V + + L L L
Sbjct: 385 LMLTKKLMRRKANLQDLFRIYQVILRTPKILKVLHELDNSTIESVICAPFKSFLKDLTGL 444
Query: 373 KMM----------DRKDAVM-------------------DKMKEYLESTARRLNLVADKT 403
K M +R + ++ KM+E ++ LNL
Sbjct: 445 KQMVEQVVDFEAIERGEYLVKASFDSRLMELQQMMTELYSKMEELQFKCSQELNLDGKNQ 504
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+KLE+ + G +RIT+K ++ + + Y I+D ++GGVRF D+L ++ + + Y
Sbjct: 505 VKLESVAKLGHHFRITVKDDSVLRKNKNYRIVDVIKGGVRFTSDKLEGYADEFASCRTRY 564
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E Q SIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP PYVRP M G
Sbjct: 565 EEQQLSIVEEIIHVAVGYAAPLTLLNNELAQLDCLVSFAIAARSAPTPYVRPKMLEEGAR 624
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LVL RHP +ELQ V++I N V FK E + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 625 ELVLEDVRHPCLELQEHVNFIANSVDFKKEECNMFIITGPNMGGKSTYIRSVGTAVLMAH 684
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IG FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDEL
Sbjct: 685 IGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDEL 744
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ + T +N ++A+ D+
Sbjct: 745 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLSTVKNCHMAAVADADD 804
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+PG KS+G+ A++A +PE +++ A+++ E+E
Sbjct: 805 FTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFE 846
>gi|113204903|gb|ABI34185.1| RE64551p [Drosophila melanogaster]
Length = 917
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 308/822 (37%), Positives = 474/822 (57%), Gaps = 93/822 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKSNL 65
+K TT+RFF+ + Y VHG +D EL+ + KS K +TL+ V ++K N
Sbjct: 33 EKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGALLPDDKKETLQFVSMSKGNF 92
Query: 66 SCFSHILCVI-----------SEDKTLE--------------------TVLTNT------ 88
L ++ S D +E ++ N+
Sbjct: 93 ELAVRELLLVRNYRVEVYVKNSSDWEIEYRGSPGNLLQFEDILFSNKEVLVGNSIISLLV 152
Query: 89 ---------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
VGVA V+ + KF + E DDD+++ LEA +V PKECLLP+ + +
Sbjct: 153 KLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEATVVLLGPKECLLPS--IEGEYS 210
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
+ T+LDRN V +T KK+ + DL+QD+NRL+RF + ++A L E+ L A++ L+
Sbjct: 211 AVKTLLDRNGVMITMPKKS--GDNDLLQDLNRLLRFAKGQQEDATGLKELQLQLASNALK 268
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSLL 256
+ I YL+L+N+ N+ + I +D +++VH+ SA +++L+++P+ G S + + S+L
Sbjct: 269 TAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLDSAAVAALNIMPKPGTHPSMPSYRWQSVL 328
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+LD CRTPQGHRL+ QW+KQPL+ + + +RH V L+ + + L L+ +PD+
Sbjct: 329 GVLDHCRTPQGHRLMGQWVKQPLRSRNILNDRHNIVQCLLESPDTMETLSLDYLKRIPDI 388
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTILSSLQSL 372
L +I R+KA L+D +R+Y+ + + PK++ +L L +++V + + L L L
Sbjct: 389 LMLTKKIMRRKANLQDLFRIYQVILRTPKILKVLHELDNSTIESVICAPFKSFLKDLTGL 448
Query: 373 KMM----------DRKDAVM-------------------DKMKEYLESTARRLNLVADKT 403
K M +R + ++ KM+E ++ LNL
Sbjct: 449 KQMVEQVVDFEAIERGEYLVKASFDSRLMELQQMMTELYSKMEELQFKCSQELNLDGKNQ 508
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+KLE+ + G +RIT+K ++ + + Y I+D ++GGVRF D+L ++ + + Y
Sbjct: 509 VKLESVAKLGHHFRITVKDDSVLRKNKNYRIVDVIKGGVRFTSDKLEGYADEFASCRTRY 568
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E Q SIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP PYVRP M G
Sbjct: 569 EEQQLSIVEEIIHVAVGYAAPLTLLNNELAQLDCLVSFAIAARSAPTPYVRPKMLEEGAR 628
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LVL RHP +ELQ V++I N V FK E + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 629 ELVLEDVRHPCLELQEHVNFIANSVDFKKEECNMFIITGPNMGGKSTYIRSVGTAVLMAH 688
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IG FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDEL
Sbjct: 689 IGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDEL 748
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ + T +N ++A+ D+
Sbjct: 749 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLSTVKNCHMAAVADADD 808
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+ G KS+G+ A++A +PE +++ A+++ E+E
Sbjct: 809 FTLLYQVRSGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFE 850
>gi|24584320|ref|NP_523565.2| spellchecker1, isoform A [Drosophila melanogaster]
gi|386769639|ref|NP_001246031.1| spellchecker1, isoform D [Drosophila melanogaster]
gi|83304687|sp|P43248.4|MSH2_DROME RecName: Full=DNA mismatch repair protein spellchecker 1
gi|22946491|gb|AAF53392.2| spellchecker1, isoform A [Drosophila melanogaster]
gi|383291497|gb|AFH03705.1| spellchecker1, isoform D [Drosophila melanogaster]
Length = 917
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 307/822 (37%), Positives = 474/822 (57%), Gaps = 93/822 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKSNL 65
+K TT+RFF+ + Y VHG +D EL+ + KS K +TL+ V ++K N
Sbjct: 33 EKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGALLPDDKKETLQFVSMSKGNF 92
Query: 66 SCFSHILCVI-----------SEDKTLE--------------------TVLTNT------ 88
L ++ S D +E ++ N+
Sbjct: 93 ELAVRELLLVRNYRVEVYVKNSSDWEIEYRGSPGNLLQFEDILFSNKEVLVGNSIISLLV 152
Query: 89 ---------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
VGVA V+ + KF + E DDD+++ LEA +V PKECLLP+ + +
Sbjct: 153 KLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEATVVLLGPKECLLPS--IEGEYS 210
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
+ T+LDRN V +T KK+ + DL+QD+NRL+RF + ++A L E+ L A++ L+
Sbjct: 211 AVKTLLDRNGVMITMPKKS--GDNDLLQDLNRLLRFAKGQQEDATGLKELQLQLASNALK 268
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSLL 256
+ I YL+L+N+ N+ + I +D +++VH+ SA +++L+++P+ G S + + S+L
Sbjct: 269 TAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLDSAAVAALNIMPKPGTHPSMPSYRWQSVL 328
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+LD CRTPQGHRL+ QW+KQPL+ + + +RH V L+ + + L L+ +PD+
Sbjct: 329 GVLDHCRTPQGHRLMGQWVKQPLRSRNILNDRHNIVQCLLESPDTMETLSLDYLKRIPDI 388
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTILSSLQSL 372
L ++ R+KA L+D +R+Y+ + + PK++ +L L +++V + + L L L
Sbjct: 389 LMLTKKLMRRKANLQDLFRIYQVILRTPKILKVLHELDNSTIESVICAPFKSFLKDLTGL 448
Query: 373 KMM----------DRKDAVM-------------------DKMKEYLESTARRLNLVADKT 403
K M +R + ++ KM+E ++ LNL
Sbjct: 449 KQMVEQVVDFEAIERGEYLVKASFDSRLMELQQMMTELYSKMEELQFKCSQELNLDGKNQ 508
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+KLE+ + G +RIT+K ++ + + Y I+D ++GGVRF D+L ++ + + Y
Sbjct: 509 VKLESVAKLGHHFRITVKDDSVLRKNKNYRIVDVIKGGVRFTSDKLEGYADEFASCRTRY 568
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E Q SIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP PYVRP M G
Sbjct: 569 EEQQLSIVEEIIHVAVGYAAPLTLLNNELAQLDCLVSFAIAARSAPTPYVRPKMLEEGAR 628
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LVL RHP +ELQ V++I N V FK E + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 629 ELVLEDVRHPCLELQEHVNFIANSVDFKKEECNMFIITGPNMGGKSTYIRSVGTAVLMAH 688
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IG FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDEL
Sbjct: 689 IGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDEL 748
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ + T +N ++A+ D+
Sbjct: 749 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLSTVKNCHMAAVADADD 808
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+ G KS+G+ A++A +PE +++ A+++ E+E
Sbjct: 809 FTLLYQVRSGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFE 850
>gi|195436947|ref|XP_002066407.1| GK18274 [Drosophila willistoni]
gi|194162492|gb|EDW77393.1| GK18274 [Drosophila willistoni]
Length = 917
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/853 (36%), Positives = 476/853 (55%), Gaps = 100/853 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELI-----------------QRKSNVVYLVKTMGQK 51
+K TT+RFF++ + Y VHG +D EL+ +K + ++ + G
Sbjct: 33 EKPSTTVRFFDQTDCYTVHGSDDTELVAKIVYKSTAYVHPLMPDDKKEGLQFVAMSKGNF 92
Query: 52 DKTLETVLVNKS---------------------NLSCFSHIL----------CVISEDKT 80
+ + +L+ ++ NL F IL +IS
Sbjct: 93 ELAVRELLLVRNLRVEVYVKRTEWQLEYRGSPGNLLQFEDILFANKEVLVGNSIISLQVK 152
Query: 81 LETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNK 140
L VGVA V+ + F + E DDD+++ LEA IV PKECLLP L
Sbjct: 153 LVAGQQRRVGVAAVEQNDCLFQLLEFLDDDFFTELEATIVLLGPKECLLPQ--LEGEYAS 210
Query: 141 IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
+ T+L+RN V +T KK+ S +DL+QD+NRL+RF + + A L E+ + A LR
Sbjct: 211 VKTVLERNGVMVTVPKKS--SNDDLLQDLNRLLRFAKGQQEEANGLKELQMVLAAEALRV 268
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT---YDSLLG 257
I YL+L+N+ N+ + + +D ++VH+ SA +++L+++P+ G+ +Q + S+LG
Sbjct: 269 AIKYLDLVNDAGNLGHYELKQLDLKRFVHLDSAAVAALNIMPKPGTHPSQPSYRWQSILG 328
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD CRTPQGHRL+AQW+KQPL+ L + +RH V L+ + + L L+ +PD+
Sbjct: 329 VLDHCRTPQGHRLMAQWVKQPLRSLSLLNDRHNIVQCLLESPDTLDLLSLDYLKRIPDIL 388
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTILSSLQSLK 373
L ++ R+KA L+D +R+Y+ + + PK++ L L VQ+V + L L LK
Sbjct: 389 MLTKKLMRRKATLQDLFRIYQVILRTPKILKALLELEHATVQSVLCDPFKSFLEDLTGLK 448
Query: 374 MM----------DRKDAVM-------------------DKMKEYLESTARRLNLVADKTI 404
M +R + ++ KM+ L+L +
Sbjct: 449 QMVEQVVDFEGIERSEYLVKASFDSRLMELQETMSELYSKMERLQSKCNEELDLDGKQQA 508
Query: 405 KLENSPQ-GFAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
KLEN + G+ +RIT+K ++SI + Y I+D ++GGVRF D+L + ++ + + Y
Sbjct: 509 KLENVAKLGYHFRITLK-DDSILRKNKNYRIVDVIKGGVRFTSDKLESYAEEFASCRTRY 567
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E QQSIVEE+I ++ GY L L++ LAQ D LVSF+ A+ AP PY+RP M G+G
Sbjct: 568 EEQQQSIVEEIIQVAVGYAAPLTSLNNELAQLDCLVSFAAAARSAPTPYIRPQMLEEGSG 627
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LVL RHP +ELQ VS+I N V F+ + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 628 RLVLEDVRHPCLELQEHVSFIANSVDFEKDVCNMFIITGPNMGGKSTYIRSVGTAVLMAH 687
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVPC A IS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDEL
Sbjct: 688 VGAFVPCSKAIISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDEL 747
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ + T +N ++A+ N
Sbjct: 748 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLADNLSTVKNCHMAAVADTTN 807
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREE 760
LLYQVKPG KS+G+ A++A +PE +++ A+++ E+E K D +
Sbjct: 808 FTLLYQVKPGCMEKSFGIQVARLANFPEHVVQNAQEVYHEFEDEHAEKQTKAD------K 861
Query: 761 EYFKTVQEGEYQM 773
E +QE Q+
Sbjct: 862 ELLDKIQEAIEQL 874
>gi|338714299|ref|XP_001917820.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh2-like [Equus caballus]
Length = 937
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 317/839 (37%), Positives = 470/839 (56%), Gaps = 101/839 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K T+R F+R +FY HGEDA L R+ +VK MG KTLE+V
Sbjct: 19 FVRFFQGMPEKPTXTVRLFDRGDFYTAHGEDALLAAREVFKXQGVVKYMGPAGAKTLESV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + + +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGIKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNK--VCMTGRKKNEFSEEDLMQD-VNRLVRFDDSELKNA 183
C+LP + K+ ++ R + + +T RK+ ++ ++ NRL++ E N+
Sbjct: 199 CVLPGGETAGDMGKLRQVIQRGEFXIKITERKRLXHKRYNIHRERYNRLLKGKKGEQMNS 258
Query: 184 RLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ 243
+LPEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++
Sbjct: 259 AVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF-- 316
Query: 244 QGSTSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
QGS T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R
Sbjct: 317 QGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELR 376
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQ 355
+L E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +L+
Sbjct: 377 QSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQTLLL 436
Query: 356 NVEASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMK 386
V + L + S + M MD KM+
Sbjct: 437 AVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQ 496
Query: 387 EYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQD 443
L S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F +
Sbjct: 497 STLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN 556
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
+L + N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S
Sbjct: 557 SKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSN 616
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMG
Sbjct: 617 GAPVPYVRPVILEKGQGRITLRASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMG 676
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR GV V +AQIGCFVPC+SA +++VD I RVGA DSQ +G+STFM EM ETA
Sbjct: 677 GKSTYIRQTGVIVLMAQIGCFVPCESAEVTIVDCILARVGAGDSQLKGVSTFMAEMLETA 736
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
++++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+
Sbjct: 737 SILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQ 796
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
IPT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E
Sbjct: 797 IPTVNNLHVTALTTEETLTMLYQVKKGICDQSFGIHVAELANFPRHVIECAKQKALELE 855
>gi|195164888|ref|XP_002023278.1| GL21272 [Drosophila persimilis]
gi|194105363|gb|EDW27406.1| GL21272 [Drosophila persimilis]
Length = 887
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 305/804 (37%), Positives = 464/804 (57%), Gaps = 87/804 (10%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELIQR--KSNVVYLVKTMGQKDKTLETVLVNKSNLS 66
+K TT+RF++ + Y V+G +D EL+ + + ++ + +TL+ V ++K N
Sbjct: 33 EKPSTTVRFYDHSDCYTVNGSDDCELVAKIVYKSTAFIGALLPDDKETLQFVALSKGNFE 92
Query: 67 C-----------------------------------FSHILC----------VISEDKTL 81
F IL +IS L
Sbjct: 93 MAVRELLLVRNLRVEVYVKRNEWQLEYRGSPGNLLQFEDILFANKEVLVGNNMISLQVKL 152
Query: 82 ETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA---EYLNDNK 138
E VGVA V+ + +F + E DDD+++ LEA +V PKECLLP+ EY+
Sbjct: 153 EGGAQRRVGVASVEQNDCQFQLLEFLDDDFFTELEATVVLLGPKECLLPSVEGEYV---- 208
Query: 139 NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCL 198
+ +L+RN V +T KK+ S DL+QD+NRL+RF + ++A L E+ + A+ L
Sbjct: 209 -PVKALLERNGVMITVPKKS--SANDLLQDLNRLLRFAKGQQEDATGLKELQMLLASESL 265
Query: 199 RSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSL 255
+ I YL+L+N+ N+ + I +D ++VH+ SA + +L+++P+ G S + + S+
Sbjct: 266 KVAIKYLDLVNDAGNLGHYEIKQLDLKRFVHLDSAAVGALNIMPKPGTHPSMPSYRWQSI 325
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
LG+LD CRTPQGHRL+ +W+KQPL+ + + +RH V L+ +++ +L L+ +PD
Sbjct: 326 LGVLDHCRTPQGHRLMGKWVKQPLRSQEILNDRHNIVECLLESSDTLESLSLDYLKRIPD 385
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTILSSLQS 371
+ L ++ R+KA L+D +R+Y+ + + PK++ +L SL V++V S + L L
Sbjct: 386 ILMLTKKLMRRKATLQDLFRIYQVILRTPKIVQVLLSLENSTVESVICSPFKSFLEDLTG 445
Query: 372 LKMMDRKDAVMDKMK--EYL--ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDD 427
LK M + + ++ EYL S RL + +L + + R+ K N+ +D
Sbjct: 446 LKQMVEQVVDFEAIERGEYLVKSSFDSRLMELQQTMNELYDKME----RLKSKCNDELD- 500
Query: 428 RYTILDT---------VRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGY 478
LD+ ++GGVRF D+L ++ + YE Q SIVEE+I ++ GY
Sbjct: 501 ----LDSKQIKLGEYVIKGGVRFTSDKLEGYADEFASCHSRYEEQQLSIVEEIIQVAVGY 556
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV 538
L L++ LAQ D LVSF+IA+ AP PYVRP M G G LVL RHP +ELQ V
Sbjct: 557 AAPLTSLNNELAQLDCLVSFAIAARSAPTPYVRPNMLAEGAGKLVLTDVRHPCLELQEHV 616
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
S+I N V FK + + ++TGPNMGGKSTYIRS+G +V +A +G FVPC ATIS+VD I
Sbjct: 617 SFIANSVSFKKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCGMATISMVDSI 676
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDELGRGTST++G G+A SIA
Sbjct: 677 LGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAE 736
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
LA + FTLFATHFHEI L+ +PT +N ++AL DN LLYQV+PG KS+G+
Sbjct: 737 HLAKETKCFTLFATHFHEITKLAETLPTVKNCHMAALADADNFTLLYQVRPGVMEKSFGI 796
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
A++A +PED+++ A+++ E+E
Sbjct: 797 QVARLANFPEDVVQNAQEVYNEFE 820
>gi|296223913|ref|XP_002757838.1| PREDICTED: DNA mismatch repair protein Msh2 [Callithrix jacchus]
Length = 841
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 312/854 (36%), Positives = 476/854 (55%), Gaps = 90/854 (10%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY VHGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTVHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNKSNLSCFSHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAI 118
+++K N F L ++ + + V N G ++D+Y +
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRV--EVYKNRAGNKASK------------ENDWYLAFK-- 122
Query: 119 IVQKSPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDS 178
I+ R + +T +KK +FS +D+ QD+NRL++
Sbjct: 123 -------------------------IIQRGGILITEKKKADFSTKDIYQDLNRLLKGKKG 157
Query: 179 ELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSL 238
E N+ +LPEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L
Sbjct: 158 EQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRAL 217
Query: 239 HVLPQQGSTSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVN 297
++ QGS T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V
Sbjct: 218 NLF--QGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLLDKNRIEERLNLVEAFVE 275
Query: 298 NTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES----- 352
+ E R L E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE
Sbjct: 276 DAELRQTLQEDLLRRFPDLNRLAKKFLRQAANLQDCYRLYQGINQLPNVIQALEKYEGKH 335
Query: 353 --LVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------------------------- 383
L+ V + L + S + M MD
Sbjct: 336 QKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDL 395
Query: 384 --KMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGG 438
KM+ L S AR L L K IKL++S Q G+ +R+T K + + ++ +D + G
Sbjct: 396 EKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNG 455
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
V+F + +L + N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF
Sbjct: 456 VKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSF 515
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVT 558
+ S AP PYVRP + G G ++L RH VE+Q V++IPNDVYF+ + F+++T
Sbjct: 516 AHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVYFEKNKQMFHIIT 575
Query: 559 GPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMME 618
GPNMGGKSTYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM E
Sbjct: 576 GPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAE 635
Query: 619 MKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIA 678
M ETA++++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+
Sbjct: 636 MLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELT 695
Query: 679 LLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLM 738
L+ IPT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+
Sbjct: 696 ALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKA 755
Query: 739 KEY-EYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQC--LSLSKQKDTNRILHL 795
E E+ ++ D+ + F ++GE + +FL + + ++ + N + L
Sbjct: 756 LELEEFQYIGESQGYDDMEPAAKRCFLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKL 815
Query: 796 QETQEPGIEEYQSF 809
++ + I + SF
Sbjct: 816 KQLKAEVIAKNNSF 829
>gi|320168930|gb|EFW45829.1| Msh2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 909
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 292/820 (35%), Positives = 458/820 (55%), Gaps = 91/820 (11%)
Query: 11 KSKTTIRFFNRVEFYCVHGEDAELIQRK-SNVVYLVKTMG------QKDKTLETVLV--- 60
KS TT+R F+R ++Y VHG+DA L+ ++ + + ++K +G ET+L
Sbjct: 58 KSATTVRIFDRQDYYSVHGDDAVLVAKEFYHTLAVIKHIGTVPYVTMSQLMFETILRELL 117
Query: 61 ---------------------------NKSNLSCFSHILCVISEDKTLETVL-------- 85
+ NL F +L + + + V+
Sbjct: 118 LLRQNRVEVYAREGGKNSNAWVLSRRGSPGNLQQFEDMLFTGNSEMSTSAVVMAIKLGVD 177
Query: 86 --TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVT 143
VGV+ D + + + D+D +SNLEA+ VQ S KECL +E + + ++
Sbjct: 178 DGNRMVGVSFADATQRTISVCQFADNDQFSNLEALTVQISAKECLFTSEAGSADCARVRV 237
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
+L+R + +T RK+ +F+ +DL+QD+NRL+R +S +A LPEM L +L+
Sbjct: 238 VLERGGILVTDRKRADFASKDLVQDLNRLLRLPES--TSAASLPEMDLVYGMASTAALVK 295
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YLEL+++ N QF I D +Y+ + +A + +L+++ +T + L G+L++C+
Sbjct: 296 YLELLSDASNFGQFRIKPFDLGQYMRLDAAAVRALNLVASPLDGGNKTMN-LTGLLNKCK 354
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
T QG RLLAQW+KQPL +L I ER V +L N++ R+ L E LR +PD+ ++ R
Sbjct: 355 TAQGQRLLAQWVKQPLTNLAQIEERLNIVELLAENSDLRVALQEDHLRRMPDLHRISKRF 414
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVE---------ASNLNTILSSLQSLK- 373
R KA L+DC R+Y+ +LP L + LE V + + ++L I++ L+
Sbjct: 415 QRGKATLQDCVRLYQVCVRLPALRTALEGYVNHAQYGAIVSERFVNSLGEIIADCAKLEE 474
Query: 374 ----------------------------MMDRKDAVMDKMKEYLESTARRLNLVADKTIK 405
+ + D + ++ + L AR L+L +K +K
Sbjct: 475 LVETTIDLERTEQHEFVIKPTFDERLAALRAQSDEIGSQIHQQLNIAARDLSLEPNKVLK 534
Query: 406 LENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
LEN+ Q G+ +R++ ++ +YT +DT + GVRF +L N ++ ++++Y+
Sbjct: 535 LENNAQFGYFFRVSRAQEAALRTSKKYTTIDTKKDGVRFVSPKLRALNDEFAQLKKDYDD 594
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q ++ EVI ++ GY + L L+ ++A+ DV SF+ S AP PYVRP + G G++
Sbjct: 595 IQSTLATEVIKVAGGYCEPLELLNALVAELDVFASFAHISVSAPTPYVRPVVSAKGEGNI 654
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
L RHP +E+Q V++I NDV G+ ++TGPNMGGKSTYIR +GV V LAQIG
Sbjct: 655 RLFGARHPCLEVQDDVAFIANDVALVRGKSELQIITGPNMGGKSTYIRQVGVVVLLAQIG 714
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVPC SA + +VD I RVGA DSQ +G+STFM EM ETA+++K +++SL+IIDELGR
Sbjct: 715 CFVPCASAEVCIVDSILARVGAGDSQLKGVSTFMAEMLETASILKSASKDSLIIIDELGR 774
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GTST+DGFG+A +I+ +A+ F LFATHFHE+ L+ +PT N+ VSAL L
Sbjct: 775 GTSTYDGFGLAWAISEHIATKIHGFCLFATHFHELTALADTVPTVSNLHVSALTDNGTLT 834
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLY+V+PG C +S+G+H A+MA +P ++E A+ E E
Sbjct: 835 LLYRVRPGVCDQSFGIHVAQMADFPTKVVEMAKRKALELE 874
>gi|156376468|ref|XP_001630382.1| predicted protein [Nematostella vectensis]
gi|156217402|gb|EDO38319.1| predicted protein [Nematostella vectensis]
Length = 792
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 299/766 (39%), Positives = 450/766 (58%), Gaps = 56/766 (7%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
VGVA D+ ++K + E D+D +SNLEA+IVQ PKECL+ + + + K ++ R+
Sbjct: 21 VGVAYADVASRKLGVCEFADNDQFSNLEALIVQLGPKECLMASTDSSGDAAKTHEVVKRS 80
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ +T RKK EFS +D++QD+NRL++ + N+ LPEM + AT L ++I YLEL+
Sbjct: 81 NILVTERKKVEFSNKDIVQDLNRLLKL--TAGGNSATLPEMDMIHATAALAAVIKYLELL 138
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
++E N +QF + S D S+Y+ + +A + +L++LP ++ L G+L++C+TPQG
Sbjct: 139 SDESNFSQFKLSSFDLSQYMKLDAAAVRALNLLPNPMDGGNKSM-CLTGLLNKCKTPQGQ 197
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RL+AQW+KQPL D + I ER V V +TE R L + ++ PD LA + R+KA
Sbjct: 198 RLVAQWIKQPLMDKNKIEERLNIVEAFVEDTELRQTLQD-EMKKFPDFSRLAKKFQRQKA 256
Query: 329 GLKDCYRVYEGVSQLPKLISILESL----------------------------------- 353
L+DC RVY+ V +L +LE
Sbjct: 257 TLQDCVRVYQSVQRLEPFADVLERYHGDHRKLLVECFRDPLMELVADFAKFCDLVETTID 316
Query: 354 ---VQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSP 410
V+N E T LQ + + D +++K L R L+L KTIKLE++
Sbjct: 317 LEQVENHEYLIKATFDEGLQECR--EHMDEILEKFPVELNKAGRDLSLEPSKTIKLESNN 374
Query: 411 Q-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSI 467
Q G+ +RIT K + + RY+ ++T + GVRF + L+ N +++ + Y Q +
Sbjct: 375 QLGYFFRITRKEEKVLRNNKRYSTIETRKDGVRFTNSALSQLNDEFRGYKDTYNDVQGKL 434
Query: 468 VEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT-GSLVLNQ 526
EV+ I+ GY++ + LSDV+AQ D LVSF+ S AP PYVRP + P G+ G ++L
Sbjct: 435 AAEVLKIAGGYSEPMQGLSDVIAQIDALVSFAHVSANAPIPYVRPTITPKGSEGDIILTG 494
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q V++I NDV + F ++TGPNMGGKSTYIR IGV V +AQ+GCFVP
Sbjct: 495 SRHPCLEIQDNVAFIANDVTLSRDKQMFLIITGPNMGGKSTYIRQIGVIVLMAQLGCFVP 554
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C +A IS+ D I RVG+ DSQ +G+STFM EM ETA++++ T++SL+IIDELGRGTST
Sbjct: 555 CSTAQISITDCILARVGSGDSQLKGVSTFMSEMLETASILRTATKDSLIIIDELGRGTST 614
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQ 706
+DGFG+A +I+ +A+ + F LFATHFHE+ L+ + T N+ V+AL L LLY+
Sbjct: 615 YDGFGLAWAISEYIATQIKSFCLFATHFHELTSLADEVSTVTNLHVTALTTGGTLTLLYK 674
Query: 707 VKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG----DETNNREEEY 762
VKPG C +S+G+H A++A +P D++E A+ E E + G D T + +
Sbjct: 675 VKPGVCDQSFGIHVAELAHFPSDVIEFAKQKAAELEDFQGSSAELGQGVTDSTGESQAKR 734
Query: 763 FKTV-QEGEYQMFDFLQQCLSLSKQKDTNRILHLQETQ--EPGIEE 805
+ QEGE + DFLQ+ L + T+ ++ +E Q + G++E
Sbjct: 735 RRLAKQEGEVIIKDFLQKVNQLQLETMTDEQIY-EEVQKLKQGVQE 779
>gi|340375398|ref|XP_003386222.1| PREDICTED: DNA mismatch repair protein Msh2-like [Amphimedon
queenslandica]
Length = 906
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 306/873 (35%), Positives = 467/873 (53%), Gaps = 101/873 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
F FF P+K +TTIR F+R ++Y HG D + ++ + K G + + +V
Sbjct: 10 FTRFFRSMPEKPETTIRVFDRGDYYTAHGNDGLFVAKEVFGSTSVAKYYGSEGNKVPSVS 69
Query: 60 VNKSNLSCFSHILCVISEDKT--------------------------LETVLTNT----- 88
++K F+ L ++ + + LE ++ N+
Sbjct: 70 LSKLKFESFARDLLLVKKYRIEVYRNKVKSGNDWFPAYKASPGNLQQLEDIIFNSNLQGD 129
Query: 89 -----------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA 131
VGVA D +++ + + ++D ++N E+++VQ PKECLL A
Sbjct: 130 SCTAMAIRLSSKDGQRVVGVAFSDFSSQELKVCQFVENDNFANFESLLVQIGPKECLLVA 189
Query: 132 EYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCL 191
+ N + L + + +T RK+++F+ +D++QD+NRL++ +N LPE+ L
Sbjct: 190 KDTNTEAGIMKKTLQKANILITERKRSDFNSKDIVQDLNRLLK-----TENCSSLPELEL 244
Query: 192 TTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT 251
+ + L ++I YLEL+++E N N FS+ D ++Y+ + +A +L+V QG A
Sbjct: 245 SLSMEALSAIIKYLELLSDERNFNSFSLSQFDMNRYMRLDTAASLALNVEAGQGENQAY- 303
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SLLG+L+ R+PQG RLL QW+KQPL DL IVER V + V+ R ++ +L+
Sbjct: 304 --SLLGVLNHTRSPQGQRLLRQWIKQPLTDLKHIVERQNLVELFVDTVTLRQSVQGRSLK 361
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS 371
+PD+ L+ ++ + K L+DC +Y+ V LP L +L S N E+ ++ L+
Sbjct: 362 IIPDLFRLSKKLQQGKGTLQDCVIIYQAVQILPTLTDVLNSYNGNHESLLKEVFITPLEE 421
Query: 372 L------------------------------------KMMDRKDAVMDKMKEYLESTARR 395
L K+ D ++ +KM + TA
Sbjct: 422 LADDFIKYREMIETTIDLDMIQHHEYLIKPSFDEELQKLRDNMSSIEEKMNVIYKKTASD 481
Query: 396 LNLVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQ 452
L+L KT+KLE NS G+ R++ K I R+ +LD GVRF L + +
Sbjct: 482 LSLDVGKTLKLESNSHLGYYMRLSKKTEKLIRGQKRFIVLDARNEGVRFTVSPLKVLSEE 541
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
YQ +QR Y Q EV+ I++GYT + +D+ A D L S + A+T +P Y+RP
Sbjct: 542 YQGLQRVYNQQQDKFAREVVQIASGYTGPILTFNDLTAHIDALTSLAEAATSSPLGYIRP 601
Query: 513 CMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSI 572
+ GTG++VL RHP +E Q +S+I NDV GE F ++TGPNMGGKSTYIR I
Sbjct: 602 SITDKGTGNIVLTGARHPCLEKQDDISFIANDVSLLRGEDEFQIITGPNMGGKSTYIRMI 661
Query: 573 GVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
GV V +AQ+G FVPC SA IS+VD I RVGA DSQ +G+STFM EM ETAT++K T N
Sbjct: 662 GVIVLMAQVGSFVPCTSANISIVDSILARVGAGDSQLKGVSTFMSEMLETATILKTATRN 721
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV 692
SL+IIDELGRGTST+DGFG+A +I++ +A+ F LFATHFHE+ LS +PT N V
Sbjct: 722 SLIIIDELGRGTSTYDGFGLAWAISQHIATQIHCFCLFATHFHELTSLSDTVPTVSNRHV 781
Query: 693 SALEQEDN-LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
+A+ DN L LLY+V G +S+G+ A+MA +P +++ AR E E + S
Sbjct: 782 TAITSSDNTLTLLYKVNKGVSDQSFGIQVAEMAHFPSEVISYARQKAAELELFYNKGEGS 841
Query: 752 GDETNNREEEYFKTVQEGEYQMFDFLQQCLSLS 784
DE ++ ++EGE + +L++ +LS
Sbjct: 842 IDEPTAKKRR--TEIKEGEELIDSYLRRIDALS 872
>gi|301611824|ref|XP_002935427.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2,
partial [Xenopus (Silurana) tropicalis]
Length = 878
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 307/873 (35%), Positives = 461/873 (52%), Gaps = 138/873 (15%)
Query: 9 PQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNK--- 62
P+K TT+R F+R ++Y VHG DA + K+N V +K +G K LE+V+++K
Sbjct: 6 PEKPDTTVRVFDRNDYYTVHGGDAIFAAKEVFKTNGV--IKYLGSGSKKLESVVLSKMNF 63
Query: 63 ----------------------------------------SNLSCFSHILCVISEDKTLE 82
NL+ F IL S+ T
Sbjct: 64 ESVVKDLLLVRQYRVEVYKNKSGGKSSKENDWQLAFKASPGNLTQFEEILFGNSDMSTAV 123
Query: 83 TVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
V+ VGV VD +K + E PD+D +SNLEA++VQ PKEC++P
Sbjct: 124 GVVGIKLVSAEGQRLVGVGYVDSTLRKLGVCEFPDNDQFSNLEALLVQIGPKECVMPGGD 183
Query: 134 LNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
+ K+ I+ R + +T RKK EF+ +D +QD+NRL++ E + LPEM
Sbjct: 184 TAGDMGKLRQIVKRGGILITDRKKAEFTTKDSVQDLNRLLKAKKGEQVTSAALPEMEKQV 243
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A L S++ YLEL+++E N QF + + D S+Y+ + +A + +L++ P
Sbjct: 244 AMSALASVMKYLELLSDESNFGQFVMTNFDLSQYMKLDNAAVGALNLFP----------- 292
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
PL D + I ER V V + E R L E LR
Sbjct: 293 ------------------------PLMDKNRIEERLNLVEAFVTDAELRQCLQEDLLRRF 328
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTIL 366
PD+ LA + R+ A L+DCYR+Y+ V+QLP +I +E L+ V A+ L+ +
Sbjct: 329 PDLNRLAKKFQRQTANLQDCYRLYQAVNQLPGVIQAIEKYEGTHQMLLLAVFATPLSDLS 388
Query: 367 SSLQSLKMMDRKDAVMDK-----------------------------MKEYLESTARRLN 397
S + M MD+ M+ L AR L
Sbjct: 389 SDFSKFQEMIETTLDMDQVENHEFLVKASFDPNLTELREKMNELEKNMQAALNGAARELG 448
Query: 398 LVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQ 454
L A K+IKLE NS G +R+T K ++ + ++T +D + GVRF + +L++ + +Y
Sbjct: 449 LDAGKSIKLESNSQVGHFFRVTCKEEKALRNNKKFTTIDIQKNGVRFTNGKLSSLSEEYM 508
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
+ EYE Q +IV+E+I ISAGY + L+DV+AQ D VSF+ S AP PYVRP +
Sbjct: 509 RNREEYEEAQNAIVKEIISISAGYVDPIQTLNDVIAQLDAAVSFAYVSNSAPVPYVRPVI 568
Query: 515 KPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
G G ++L RHP +E+Q V++IPND+ F+ + F+++TGPNMGGKSTYIR GV
Sbjct: 569 LEKGQGKIMLQSARHPCIEMQDDVAFIPNDITFEKEKQMFHIITGPNMGGKSTYIRQTGV 628
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
V +AQIG FVPCDSA IS+VD I RVGA DSQ +G+STFM EM ETA++++ TENSL
Sbjct: 629 IVLMAQIGSFVPCDSAEISIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATENSL 688
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
+IIDELGRGTST+DGFG+A +I+ +++ + F +FATHFHE+ L+ +PT N+ V+
Sbjct: 689 IIIDELGRGTSTYDGFGLAWAISEYISTKIKAFCMFATHFHELTALADQVPTVNNLHVTX 748
Query: 695 LEQEDNLV-LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD---LMKEYEYSLDTKTP 750
+ N ++ G C +S+G+H A++A +P+ ++E A++ ++E+++ +
Sbjct: 749 XXSQHNYSDFVFYFFXGVCDQSFGIHVAELANFPKHVIETAKEKALQLEEFQFVGNPDDC 808
Query: 751 SGDETNNREEEYFKTVQEGEYQMFDFLQQCLSL 783
+ T R K +EGE + DFL + +L
Sbjct: 809 DDEPTRKRR---CKEKEEGEKIIQDFLSRVKAL 838
>gi|91093785|ref|XP_967374.1| PREDICTED: similar to mismatch repair protein [Tribolium castaneum]
gi|270015917|gb|EFA12365.1| hypothetical protein TcasGA2_TC002071 [Tribolium castaneum]
Length = 913
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 321/891 (36%), Positives = 485/891 (54%), Gaps = 100/891 (11%)
Query: 1 HKFYLFFF---PQKSKTTIRFFNRVEFYCVHGEDAELIQRKSNVVYLVKTMGQKDKTLET 57
+ ++ FF PQK +T+RFF+ +FY +H DA + +VK MG+ D L
Sbjct: 17 QRLFVDFFNNLPQKPSSTLRFFSHGDFYTLHSSDAS--SASTFTGNIVKYMGE-DPQLSY 73
Query: 58 VLVNKS----------------------------------------NLSCFSHIL----- 72
V++ KS NLS F +L
Sbjct: 74 VVLRKSQFEQYVRELLLVRQYRVEVYVKSTPNKINDWTLKYKGSPGNLSQFEDVLFENAS 133
Query: 73 CVISEDKT-LETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA 131
S D L+ + A V+ KF + E D++ ++ LEA+I Q P+EC++P
Sbjct: 134 ITFSNDVLGLKVTKGRIIAAASVNSTELKFQVCEFSDNECFTELEALIAQVGPRECVIPQ 193
Query: 132 EYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCL 191
D ++ +L+RN V + KK++F E+++QD+NRL+ F + ++ PE
Sbjct: 194 GEAPD-LIELKKVLERNSVLVARAKKSDFGAENIVQDLNRLLYFAEGHQRSCLSFPETHN 252
Query: 192 TTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT 251
+ A CL ++I +L L +E N NQF I S+D +YV + +A + SL++LP+ G + ++
Sbjct: 253 SEALTCLNAVIKFLNLTGDEQNFNQFRISSLDVHRYVRLDNAALYSLNILPKPGVNTLES 312
Query: 252 YD------SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
+ SL GILD C TPQG RLL W+KQPLKDL+ I ERH V V N + R +L
Sbjct: 313 TNQTSKNFSLKGILDHCVTPQGRRLLETWIKQPLKDLNLIQERHEIVETFVKNPQLRQDL 372
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI---------SILESLVQN 356
L LPD+ L+ ++ +KA L+DCY+VY+ V+ +P L+ S+ +L+
Sbjct: 373 QTEVLARLPDLLLLSKKLSSQKATLQDCYKVYQVVAAVPLLLKNLKQVDNPSLQSALIHP 432
Query: 357 VEA-----SNLNTILSSLQSLKMMDR-------------------KDAVMDKMKEYLEST 392
+E ++ L L+++DR K + ++M++ L +
Sbjct: 433 IEELRNDLDKYQDMIEELLDLELVDRGEFLVKSSFSPALEEISARKLQIEERMQKLLRAA 492
Query: 393 ARRLNLVADKTIKLENSPQG-FAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATA 449
A L +KTIKL+ + Q + +R+T+K + + RY ILD V+GGVRF + +LA
Sbjct: 493 ANDLGFEEEKTIKLDYTDQHRYFFRVTLKEEPVLRSNSRYQILDVVKGGVRFTNSKLAEL 552
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
N Y + EY Q++I+ E+ ++AGY L L+ +A DVLV+F+ + A PY
Sbjct: 553 NDDYAEAKAEYVEQQKTIISEMFAVAAGYGDCLRNLNMFIATVDVLVAFANVAVWARVPY 612
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
+RP M G L L + RHP +E Q VS+IPN V F S E + +++TGPNM GKSTYI
Sbjct: 613 IRPKMFEAGQSPLKLFKVRHPCIEQQEHVSFIPNSVEFDS-EHTLHIITGPNMCGKSTYI 671
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
RSIGV V +AQIG FVPC+ A I +VD I RVGA D +G+STFM+EM ETAT+IK
Sbjct: 672 RSIGVCVLMAQIGSFVPCNYAEIPIVDAILARVGAEDCLLKGLSTFMVEMIETATIIKSA 731
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T NSLVIIDELGRGTST+DG G+A +IA LA + F+LFATHFHEI L+ + P+ N
Sbjct: 732 TPNSLVIIDELGRGTSTYDGCGLAFAIAEFLAKEIKCFSLFATHFHEITRLAEMHPSVCN 791
Query: 690 VQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT 749
V+A+ ++ + LYQ++ G C SYG+HCA+M + +D+++ A + K+ E++ +
Sbjct: 792 KHVTAVTTDNTITPLYQIRDGECDNSYGIHCARMVEFSDDVIQSAVEHQKKLEHTAGMQF 851
Query: 750 PSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKDTNRILHLQETQE 800
E R + V EG+ + D L++ L K D + + + + +E
Sbjct: 852 LRDFEPVLRRQ----VVSEGDKIIQDTLEKVKGLDKLSDEDLVKEIAKLKE 898
>gi|1000885|gb|AAB59572.1| The deletion results in premature stop [Homo sapiens]
Length = 810
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 292/768 (38%), Positives = 426/768 (55%), Gaps = 98/768 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHF 674
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FAT F
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATIF 784
>gi|449663119|ref|XP_002154213.2| PREDICTED: DNA mismatch repair protein Msh2-like [Hydra
magnipapillata]
Length = 911
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 303/838 (36%), Positives = 457/838 (54%), Gaps = 123/838 (14%)
Query: 1 HKF--YLFFFPQKSKTTIRFFNRVEFYCVHGEDA-----ELIQRKSNVVYLVKTMGQKDK 53
H F YL +K TT+RFF+R EFY VH +DA EL + +S ++K +G +K
Sbjct: 18 HGFVAYLNNLGEKPNTTVRFFDRGEFYTVHNDDAIFAAKELFKTQS----VIKELGSGNK 73
Query: 54 TLETVLVNKSNLSCFSHILCVISE-------DKT-------------------------- 80
+ +V ++K+N F L +I + +KT
Sbjct: 74 KILSVALSKNNFEKFLRELLLIRQYRVELYRNKTGKSNQWDLVGKASPGNLQQFEEMLFG 133
Query: 81 ------LETVLT---------NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPK 125
+ +L+ +G A VDL + + E D+D ++NLEA ++Q K
Sbjct: 134 NNEMSDMAVILSLKVSSNENQKLIGAAFVDLTERILNVCEFCDNDQFTNLEAFLLQVGVK 193
Query: 126 ECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL 185
EC++ + +DN K+ +L R+ V +T RKK+EF +D+ QD+NRL++ + ++
Sbjct: 194 ECVITHQDCSDNGGKLQQVLQRSNVLITERKKSEFQSKDIHQDLNRLLK---TSYGSSTA 250
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG 245
L E+ L A CL ++I YLEL+++E NQFSI D ++Y+ + + + +L+V+P
Sbjct: 251 LREVDLLQAMMCLSAIIKYLELLSDESVFNQFSIKIFDLNQYMRLDAGAIKALNVMPSVD 310
Query: 246 STSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
+ ++ S+ G+L+ CRT QG RLLAQW+KQPL D I ER V+ N ++ R +
Sbjct: 311 DGNNKSM-SVFGLLNMCRTSQGQRLLAQWVKQPLLDHKKIEERLDIVDAFFNRSDTRKTI 369
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL------------ 353
+ L+ +PD+ ++ + RKKA L+DC RVY+ + QLP L+S L+S
Sbjct: 370 QDTYLKKMPDLTRISKKFSRKKASLQDCVRVYQAIKQLPYLLSALDSYEGDYKVTITDVF 429
Query: 354 --------------------------VQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKE 387
V+N E SSLQ K + + +++ +
Sbjct: 430 CKPLKDLISDFSKYIELIETTVDLEDVENHEYMIKAEFDSSLQDCKTT--MNEISEQLND 487
Query: 388 YLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDD 444
L+ AR L L A KTIKLE NS G +R+T+K + ++T ++T + GVRF +
Sbjct: 488 SLDDAARVLGLDAGKTIKLESNSQIGHFFRVTLKEEKVLRSCKKFTTIETRKDGVRFTNS 547
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
L+ + Y+ + Y Q + EVI I++GY +N LSD++A DVL+
Sbjct: 548 TLSELSNAYRTQKASYNELQTQLANEVIKIASGYADPMNVLSDLVAHLDVLLR------- 600
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
Y++ G+ ++L RHP +E+Q +S+I NDV E F ++TGPNMGG
Sbjct: 601 ----YIK------GSDKIILIGSRHPCMEVQDDISFIANDVKLVKEEAEFLVITGPNMGG 650
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR I V +AQIG FVPCD A IS+V I RVGA DSQ +G+STFM EM ETA+
Sbjct: 651 KSTYIRQIAVITLMAQIGSFVPCDQAEISIVKSIMARVGAGDSQMKGVSTFMSEMLETAS 710
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
++ +NSL+IIDELGRGTST+DGFG+A +I+ +A+ F LFATHFHE+ L+ I
Sbjct: 711 ILNAADKNSLIIIDELGRGTSTYDGFGLAWAISEYIATKINAFCLFATHFHELTTLADEI 770
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
T +N V+AL D L LLY+VKPG C +S+G+H A++A +P+ ++E A+ KE E
Sbjct: 771 STVKNFHVTALTTSDRLTLLYRVKPGVCDQSFGIHVAEIADFPKHVIEFAKQKAKELE 828
>gi|183582335|dbj|BAG28295.1| mismatch repair protein [Mesocricetus auratus]
Length = 782
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 287/766 (37%), Positives = 430/766 (56%), Gaps = 98/766 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K +G KTL++V
Sbjct: 19 FVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYLGPAGAKTLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S+ + V + V GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSDSVGIVGVKMSMVDGQRHVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDICQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSYFGQFELTTFDFSQYMRLDMAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+T QG RL+ QW+KQPL D + I ER V ++E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDKNRIEERLNLVEAFAEDSELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L DCYR+Y+GV+QLP +I L+ +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLHDCYRLYQGVNQLPSVIQALKKYQGRHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMDKMKEYLEST- 392
++ L L+ MD+ + VMD +++ L+ST
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLIKPSFDPNLSELREVMDGLEKKLQSTL 496
Query: 393 ---ARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
AR L L K +KL++S Q G+ +R+T K + + ++ +D + GV+F + L
Sbjct: 497 ISAARGLGLDPGKQMKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSEL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 SALNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G +VL RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGKGRIVLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S++D I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSILDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFAT 672
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FAT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFAT 782
>gi|195579202|ref|XP_002079451.1| GD23963 [Drosophila simulans]
gi|194191460|gb|EDX05036.1| GD23963 [Drosophila simulans]
Length = 879
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 291/822 (35%), Positives = 450/822 (54%), Gaps = 131/822 (15%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELI-----------------QRKSNVVYLVKTMGQK 51
+K TT+RFF+ + Y VHG +D EL+ +K + ++ + G
Sbjct: 33 EKPATTVRFFDHSDRYTVHGSDDCELVAKIVYKSTAFIGALLPDDKKETLQFVSMSKGNF 92
Query: 52 DKTLETVLVNKS----------------------NLSCFSHIL----------CVISEDK 79
++ + +L+ ++ NL F IL +IS
Sbjct: 93 ERAVRELLLVRNYRVEVYVKNSSDWEIEYRGSPGNLLQFEDILFSNKEVLVGNSIISLLV 152
Query: 80 TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
L+ VGVA V+ + KF + E DDD ++ LEA +V PKECLLP+ + + +
Sbjct: 153 KLDAGGQRRVGVASVEQNDCKFQLLEFLDDDLFTELEATVVLLGPKECLLPS--IEGDYS 210
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
+ T+LDRN V +T KK+ DL+QD+NRL+RF + ++A L E+ L A++ L+
Sbjct: 211 AVKTLLDRNGVMITVPKKS--GANDLLQDLNRLLRFAKGQQEDATGLKELQLQLASNALK 268
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSLL 256
+ I YL+L+N+ N+ + I +D ++VH+ SA +++L+++P+ G S + + S+L
Sbjct: 269 TAIKYLDLVNDPGNLGHYEIKQLDLKRFVHLDSAAVAALNIMPKPGTHPSMPSYRWQSVL 328
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+LD CRTPQGHRL+ QW+KQPL+ D + +RH V L+ + + L L+ +PD+
Sbjct: 329 GVLDHCRTPQGHRLMGQWVKQPLRSRDILNDRHNIVQCLLESPDTLETLSLDYLKRIPDI 388
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEASNLNTILSSLQSL 372
L ++ R+KA L+D +R+Y+ + + PK++ +L S +++V L L L
Sbjct: 389 LMLTKKLMRRKANLQDLFRIYQVILRTPKILKVLLELDNSTIESVICEPFKNFLMDLTGL 448
Query: 373 KMM----------DRKDAVM-------------------DKMKEYLESTARRLNLVADKT 403
K M +R + ++ KM+E + LNL
Sbjct: 449 KQMVEQVVDFEAIERGEYLVKASFDSRLMELQQTMTELYSKMEELQFKCTQELNLDGKNQ 508
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+KLE+ + G +RIT+K ++ + + Y I+D ++GGVRF D+L ++ + + Y
Sbjct: 509 VKLESVAKLGHHFRITVKDDSVLRKNKNYRIVDVIKGGVRFTSDKLQGYADEFASCRTRY 568
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E QQSIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP YVRP
Sbjct: 569 EEQQQSIVEEIIQVAVGYASPLTLLNNELAQLDCLVSFAIAARSAPTLYVRP-------- 620
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
EV + GPNMGGKSTYIRS+G +V +A
Sbjct: 621 ------------------------------EVQHVYIMGPNMGGKSTYIRSVGTAVLMAH 650
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IG FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDEL
Sbjct: 651 IGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDEL 710
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ +PT +N ++A+ D+
Sbjct: 711 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLPTVKNCHMAAVADADD 770
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+PG KS+G+ A++A +PE +++ A+++ E+E
Sbjct: 771 FTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFE 812
>gi|57870611|gb|AAH89046.1| MSH2 protein, partial [Xenopus laevis]
Length = 676
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/600 (41%), Positives = 373/600 (62%), Gaps = 43/600 (7%)
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG 245
LPEM A L +++ YLEL+++E N QF + + D S+Y+ + +A + +L++ P
Sbjct: 1 LPEMEKQVAMSALAAVMKYLELLSDESNFGQFVMTNFDLSQYMKLDNAAVGALNLFPGSA 60
Query: 246 STSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
++ T SL G+L++C+TPQG RL+ QW+KQPL D + + ER V V + E R L
Sbjct: 61 EDTSGT-QSLAGLLNKCKTPQGQRLVNQWIKQPLMDKNRVEERLNLVEAFVMDVELRQCL 119
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+ V+ LP ++ +E L+ V
Sbjct: 120 QEDLLRRFPDLNRLAKKFQRQTANLQDCYRLYQAVNHLPTVVQAIEKYEGTHQMLLLAVF 179
Query: 359 ASNLNTILSSLQSLKMM-----------------------------DRKDAVMDKMKEYL 389
A+ L+ + S + M ++ D + M+ L
Sbjct: 180 ATPLSDLSSDFSKFQEMIETTLDMDQVENHEFLVKASFDPNLTELREKMDELEKNMQGAL 239
Query: 390 ESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
AR L L A K+IKLE NS G +R+T K ++ + ++T +D + GVRF + +L
Sbjct: 240 GGAARELGLDAGKSIKLESNSQIGHYFRVTCKEEKALRNNKKFTTIDIQKNGVRFTNSKL 299
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ + +Y + EYE Q +IV+E+I ISAGY + L+DV+AQ D +VSF+ S AP
Sbjct: 300 SSLSEEYMRNREEYEEAQNAIVKEIITISAGYVDPIQTLNDVIAQLDAVVSFAHVSNSAP 359
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G +VL+ RHP +E+Q V++IPND+ F+ + F ++TGPNMGGKS
Sbjct: 360 VPYVRPVILEKGQGRIVLHSARHPCIEMQDDVAFIPNDITFEKEKQMFQIITGPNMGGKS 419
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPCDSA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 420 TYIRQTGVIVLMAQIGCFVPCDSAQVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 479
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ TENSL+IIDELGRGTST+DGFG+A +I+ +++ + F +FATHFHE+ L+ +PT
Sbjct: 480 RSATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIKAFCMFATHFHELTALADQVPT 539
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL ED L +LY++K G C +S+G+H A++A +P+ ++E A++ ++E++Y
Sbjct: 540 VNNLHVTALTTEDTLTMLYRIKKGVCDQSFGIHVAELANFPKHVIETAKEKALELEEFQY 599
>gi|167536501|ref|XP_001749922.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771637|gb|EDQ85301.1| predicted protein [Monosiga brevicollis MX1]
Length = 878
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 290/890 (32%), Positives = 464/890 (52%), Gaps = 132/890 (14%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDA----------------------------------- 32
P K T IRFF+R ++Y +HG+DA
Sbjct: 13 LPAKPATCIRFFDRGDYYTLHGDDALYAAKNIFKSQGVLKYYGAKKLPSCSMNQMLFETT 72
Query: 33 --ELIQRKSNVVYLVKTMGQKDKTLETVLVNKSNLSCFSHILC---VISEDKTLETVLTN 87
+L+ ++ V + + G+ + T + N F IL ++ L L
Sbjct: 73 IRDLLLQRRYRVEVFSSSGKSHQWAVTKKASPGNTQAFQDILYNSDLVQSSIVLAVTLQG 132
Query: 88 T-----VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIV 142
+ VGVA D F + + PD ++N EA++VQ PKE LLP+E N K+
Sbjct: 133 SGNDQLVGVAFCDTAQASFGVCQFPDTAQFNNFEALLVQVGPKEVLLPSEQNNPLITKLS 192
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
I +R +T R+K ++ +D++QD+ RL++ ++ + A LP++ A L +I
Sbjct: 193 QISERYGAMVTPRRKADYQAKDVVQDLERLLKL--AQDQKAAALPQVDEKAAMAALCCVI 250
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
+YL+L+ ++ N N+F + + ++++Y+ + SA M +L+V P G S +++ SL G+L+ C
Sbjct: 251 HYLDLLADDANTNKFRLSTFNFTQYMRLDSAAMRALNVFPA-GPHSTKSH-SLFGLLNHC 308
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
+T QG RLL QW+KQPL D++ I ERH E AL+ +PD+ L+ +
Sbjct: 309 KTLQGQRLLYQWLKQPLLDVNRIRERHDL---------------ETALKKMPDLSRLSKK 353
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQNVEASNLNTILSSLQS-LKM 374
R++A L+D VY V +LP LI L+ +L+ + T+ + L++
Sbjct: 354 FARQRARLQDVVSVYMAVKRLPDLIEHLQDFEGTHATLLHKQFLEDFTTLFEDFEKYLEL 413
Query: 375 MDRK----------------------------DAVMDKMKEYLESTARRLNLVADKTIKL 406
++R D + +++ E A LNL K++K
Sbjct: 414 VERTIDLEQADHQNYFIKPTFNEDMQKTREAIDTIEEEITSACEEAAEDLNLEYGKSLKC 473
Query: 407 ENSPQG--FAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
E + + +R+T + + + YT ++T + G++F + RL+ N QA Y
Sbjct: 474 EQDAKSKQYLFRVTRAYDKLLRNNKAYTTIETQKNGIKFTNKRLSRLNEARQAQHDRYAE 533
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q + +VIGI++GY + + +L+ V+A DV +S + AS AP PYVRP M MG G++
Sbjct: 534 IQAEVAAKVIGIASGYEEPMEELNAVIAVLDVFLSLATASLRAPVPYVRPVMHAMGEGNI 593
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
L CRHP +E+Q +++IPNDV + + F ++TGPNMGGKSTYIR IG++V +AQIG
Sbjct: 594 TLKACRHPCLEVQDELAFIPNDVDLRREDGEFQIITGPNMGGKSTYIRQIGMAVLMAQIG 653
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVP ++A I+VVD + RGISTFM EM ETA+++ + NSL+I+DELGR
Sbjct: 654 CFVPANTAEIAVVDAVLA---------RGISTFMAEMLETASILSAASRNSLIIVDELGR 704
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GTST+DGFG+A +I+ +A F LFATHFHE+ L+ +P+ N+ V AL + L
Sbjct: 705 GTSTYDGFGLAWAISEHIAKTIGAFCLFATHFHELTALADELPSVVNLHVDALTSNNELT 764
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEY 762
LLY+VKPG C +S+G+H A+M +P ++E A+ E E +T G+ + +++
Sbjct: 765 LLYKVKPGVCDQSFGIHVAEMVHFPAAVIEDAKRKAAELEDFENT----GELGSTPDKKA 820
Query: 763 FKTVQEGEYQMFDFLQQCLSLSKQKDTNRILHLQETQEPGIEEYQSFDKV 812
+EGE + F+ Q S+ Q G+ Q+F+KV
Sbjct: 821 KLEQREGEQLLSTFVDQVRSI---------------QAEGLTPEQAFEKV 855
>gi|328766455|gb|EGF76509.1| hypothetical protein BATDEDRAFT_21067 [Batrachochytrium
dendrobatidis JAM81]
Length = 923
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 279/750 (37%), Positives = 426/750 (56%), Gaps = 61/750 (8%)
Query: 89 VGVAIVDLDT-KKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
VGV D T ++ + E D++ ++N E+I++Q KE ++P + N + KI I+ R
Sbjct: 155 VGVGYTDATTMRRLGICEFVDNETFTNFESIMIQLGVKEVVMPDDSQNYDLKKIKAIVLR 214
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+T R+K+EF+ +++ QD++RL+ D LPEM LTTA C+ +LI+YL+L
Sbjct: 215 CDAIITERRKSEFNIQNIQQDLSRLLESD----IFVSALPEMELTTAMRCIAALIHYLDL 270
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--QQGSTSAQTYDSLLGILDRCRTP 265
+ +E N +++I D S+Y+ + +A + +L+++P Q G SA S+ G+LD+C+T
Sbjct: 271 LADESNFGKYTIEQHDLSQYMRLDAAAVKALNLVPNGQSGPKSA----SIFGLLDQCKTA 326
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
QG RLL QW+KQPL ++ IV R V + ++++ R L + L+ PD+ LA + R
Sbjct: 327 QGSRLLGQWIKQPLMNISDIVNRQNLVQVFFDDSQLRQALQDERLKTFPDLHRLARKFQR 386
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILE-----------------------SLVQNVEASNL 362
A L+D RVY+ V LP ++ LE SL + E
Sbjct: 387 GSASLQDVVRVYQVVLGLPAMVETLEDYSGKYMDLFSETFTLKFKEYSESLCKLQELVET 446
Query: 363 NTILSSLQS-------------LKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-N 408
L+++++ L+ D V++ ++ E A L + +K +K E N
Sbjct: 447 TIDLAAVENHQYLIKPDFHRELLETRSSMDNVLNTIQSEAEQVAIDLGIEFEKRLKFEKN 506
Query: 409 SPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
S G+ R++ N I + Y L T + GV F L T + + + + YE QQ+
Sbjct: 507 SQYGYHLRLSRVDANRIRGNRDYIELSTQKAGVLFTTVNLRTLSNNFAELTKAYELLQQN 566
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+ ++VI I+ Y L L+ ++A DVLVSF+ + AP YVRP + G G ++L +
Sbjct: 567 LSKDVISITGSYFPVLELLNQLVAHIDVLVSFADVAISAPMQYVRPNILLSGQGDIILKK 626
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP VE+Q VS+I NDV + F ++TGPNMGGKSTYIR IGV V +AQIG FVP
Sbjct: 627 ARHPCVEVQDDVSFIENDVDLVRNDSVFQIITGPNMGGKSTYIRQIGVIVLMAQIGSFVP 686
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C+ A++S+VD I RVGA DSQ +GISTFM EM ETA++++ T NSL+IIDELGRGTST
Sbjct: 687 CEEASVSIVDSILARVGANDSQLKGISTFMAEMLETASILRAATSNSLIIIDELGRGTST 746
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL-----EQEDNL 701
+DGFG+A +IA +A H FTLFATHFHE++ L+ +P +N+ VSAL +L
Sbjct: 747 YDGFGLAWAIAEHIAKHIGCFTLFATHFHELSNLADQVPFVKNLHVSALLSTLSSGPKSL 806
Query: 702 VLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-YSLDTKTPSGDETNNREE 760
LLY+V PG C +S+G+H A++A +P+ +++ A+ E E +S + P N +
Sbjct: 807 TLLYKVMPGVCDQSFGIHVAELAAFPDSVVKIAKRKAAELEDFSHHDEQPK--RVWNSSD 864
Query: 761 EYFKTVQEGEYQMFDFLQQCLSLSKQKDTN 790
E +Q G FL + L+K+ +N
Sbjct: 865 E---AIQSGSELAQQFLSEASILAKKHGSN 891
>gi|194384482|dbj|BAG59401.1| unnamed protein product [Homo sapiens]
Length = 682
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 257/635 (40%), Positives = 381/635 (60%), Gaps = 50/635 (7%)
Query: 182 NARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVL 241
N+ +LPEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++
Sbjct: 2 NSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF 61
Query: 242 PQQGSTSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTE 300
QGS T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E
Sbjct: 62 --QGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAE 119
Query: 301 ARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------L 353
R L E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L
Sbjct: 120 LRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKL 179
Query: 354 VQNVEASNLNTILSSLQSLKMMDRKDAVMD-----------------------------K 384
+ V + L + S + M MD K
Sbjct: 180 LLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKK 239
Query: 385 MKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRF 441
M+ L S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F
Sbjct: 240 MQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKF 299
Query: 442 QDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIA 501
+ +L + N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+
Sbjct: 300 TNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHV 359
Query: 502 STCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
S AP PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPN
Sbjct: 360 SNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPN 419
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM E
Sbjct: 420 MGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLE 479
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA++++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+
Sbjct: 480 TASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALA 539
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---M 738
IPT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ +
Sbjct: 540 NQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALEL 599
Query: 739 KEYEY-----SLDTKTPSGDETNNREEEYFKTVQE 768
+E++Y D P+ + E+ K +QE
Sbjct: 600 EEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQE 634
>gi|402219240|gb|EJT99314.1| DNA mismatch repair protein [Dacryopinax sp. DJM-731 SS1]
Length = 951
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 286/843 (33%), Positives = 455/843 (53%), Gaps = 107/843 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKD------- 52
F FF P+ + TIR F+R +F+ VHGEDA+ + Q + ++K G+K
Sbjct: 33 FCQFFERMPKVATGTIRLFDRGDFFSVHGEDAKYVAQHVYHTNTVIKYFGKKSGGLPSVT 92
Query: 53 --KTLETVLVNKS-------------------------------NLSCFSHILC----VI 75
+TL V + ++ NL +L ++
Sbjct: 93 LSQTLAKVFLREALTAKQLRVEIWQGEGGKKNMNFKLAKQASPGNLQAVEELLFADRDIL 152
Query: 76 SEDKTLETVLTN-----TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
S + L VGVA D ++ + + PD+D +SN+E++++Q KECL+
Sbjct: 153 SSPIVMAIKLATQDGARMVGVAYADASIREIGVSQFPDNDLFSNIESLVIQLGVKECLIQ 212
Query: 131 AEYLNDNKN--KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE 188
++ + + K+ +L+R V +T R+ NEF+ ++ QD+ R+++ + + ++ LPE
Sbjct: 213 SDEKRHDLDLAKLRGVLERCNVVLTERRTNEFAVRNVEQDLRRILKEETAAVQ----LPE 268
Query: 189 MCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS 248
L TA +L++YL L+ +E N Q+++ D S+Y+ + ++ + +L+++P +
Sbjct: 269 FDLKTAMAATSALLSYLSLLMDESNYGQYTLRHHDLSQYMRLDASALRALNLMPGPQDGA 328
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
A S+ G+L+RC+T QG RLL W+KQPL +L AI R V +V ++ R L +
Sbjct: 329 ANKNASVFGLLNRCKTSQGTRLLGSWLKQPLVNLHAIKRRQDLVEAMVEDSNTRRTLQDD 388
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES----------LVQNVE 358
++ +PDM+ ++ R + A L+D RVY+ + +LP LI LE LV +
Sbjct: 389 YIKSMPDMRRISKRFQKGNANLEDVVRVYQAILKLPGLIETLEGIETGNDEHKELVTDQW 448
Query: 359 ASNLNTILSSLQSLKMM-------------------DRKD----------AVMDKMKEYL 389
+NL LSSL ++ M D D V DK+
Sbjct: 449 VNNLKEYLSSLTKMEEMVVHTLDLEELQNHNYAIKPDFDDDLKHISEEICVVRDKLDAEH 508
Query: 390 ESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRL 446
+ L++ DK + LE NS G+ R++ + +I + Y L T + GV F +
Sbjct: 509 RRVSGELDMDMDKKLHLENNSVYGYCLRLSKNDSKAIHNVRGYIELSTQKAGVYFTTKHM 568
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
A+T Y + +YE Q +V+EV+ I++ YT L L +++A DV++SF+ S AP
Sbjct: 569 KEASTDYAELIEKYERMQSGLVKEVVNIASTYTPVLEMLDNLIAHMDVILSFAHVSVNAP 628
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYV+P M GTG++V+ + RHP +E+Q V++IPND G F ++TGPNMGGKS
Sbjct: 629 IPYVKPTMSEKGTGNVVVKEARHPCLEVQDEVNFIPNDHEMIKGMSEFQIITGPNMGGKS 688
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR IGV +AQ GCFVPC A + V D I RVGA DSQ +G+STFM EM ETAT++
Sbjct: 689 TYIRQIGVIALMAQTGCFVPCAEAELPVFDSILARVGAGDSQLKGVSTFMAEMLETATIL 748
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
K T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F LFATHFHE+ L++ +
Sbjct: 749 KSATKDSLIIIDELGRGTSTYDGFGLAWAISENIATQIHAFCLFATHFHELTALAQEVSH 808
Query: 687 FRNVQVSA-------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMK 739
+N+ V A + ++ LLY+V+PG C +S+G+H A++A +PE +++ A+
Sbjct: 809 VKNLHVVAHVTQRGSSNHDRDITLLYKVEPGICDQSFGIHVAELANFPESVVKLAKRKAD 868
Query: 740 EYE 742
E E
Sbjct: 869 ELE 871
>gi|299739901|ref|XP_001840335.2| DNA mismatch repair protein MSH2 [Coprinopsis cinerea okayama7#130]
gi|298403994|gb|EAU81391.2| DNA mismatch repair protein MSH2 [Coprinopsis cinerea okayama7#130]
Length = 962
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/750 (34%), Positives = 421/750 (56%), Gaps = 60/750 (8%)
Query: 53 KTLETVLVNKSNLSCFSHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYY 112
+ +E +L + S++ ++ V ++ VGVA D ++ + + D+D +
Sbjct: 130 QAVEDLLFSNSDVISAPIVMAVKLATAPMDRARLRAVGVAFADTSGRELGVADFTDNDLF 189
Query: 113 SNLEAIIVQKSPKECLLP---AEYLNDNK---NKIVTILDRNKVCMTGRKKNEFSEEDLM 166
SNLE++++Q S KE ++P A D NK+ +LDR V +T RK +EF+ ++L
Sbjct: 190 SNLESLVIQLSVKEAIIPTGTASGTTDRDIDLNKLKAVLDRCNVIITERKPSEFNVKNLS 249
Query: 167 QDVNRLVRFD----DSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSI 222
D+ L++ S A ++P++ L A L +LINYL L+ ++ N +SI +
Sbjct: 250 SDLPLLLKPSAMQSSSSADIAAVIPQLSLPNAPGALSALINYLALLGDQSNHGAYSIRTH 309
Query: 223 DYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDL 282
D S+++ + ++ + +L+++ G + ++ GIL+RC+T QG RLL W+KQPL +L
Sbjct: 310 DLSQFMRLDASALRALNLVEGPGKLGSSKTTTIFGILNRCKTAQGGRLLGTWLKQPLVNL 369
Query: 283 DAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQ 342
I +R V I V++T +R L + L+ +PD+ + R + A L+D RVY+ V +
Sbjct: 370 HEIHKRQNLVEIFVDDTNSRRTLRDEYLKFMPDLNRIYKRFQKGVATLEDVVRVYQVVLK 429
Query: 343 LPKLISILES----------LVQNVEASNLNTILSSLQSLKMMDRKDAVMDKM------- 385
LP ++ LES LV+ V A+ SL M + +D++
Sbjct: 430 LPGMVETLESVQAEDEAKLELVKEVFATTYKEAAGSLAKYGEMVEETIDLDELDNHNYVI 489
Query: 386 ------------------KEYLESTARRL----NLVADKTIKLENSPQ-GFAYRITMKLN 422
++ L++ R++ ++ DK + LEN+ G+ +R+T
Sbjct: 490 KPDYDAKLQELAEQLKDVRDGLDAEHRKVGNATDMELDKKLHLENNATYGYCFRLTKADA 549
Query: 423 NSID-DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+D D+Y T + GV F +L Q++ + Y Q +V++V+ I+A Y
Sbjct: 550 KKVDMDKYIEYATTKSGVHFATRKLKELAVQFKELSALYSKTQTGVVKQVVQIAATYGPV 609
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
L+D+LA DV++SF+ + AP PYV+P + +GSL+L + RHP +E+Q G+++I
Sbjct: 610 FENLNDILAHLDVILSFAEVAVNAPTPYVKPKVVQKDSGSLILEEARHPCLEVQEGINFI 669
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+V + F ++TGPNMGGKSTYIR +GV +AQ+G FVPC A + V D I R
Sbjct: 670 PNNVEMIKNKSEFQIITGPNMGGKSTYIRQVGVIALMAQVGSFVPCSEAELPVFDSILCR 729
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
VGA DSQ +G+STFM EM ETAT+++ T+NSL+IIDELGRGTST+DGFG+A +I+ +A
Sbjct: 730 VGAGDSQLKGVSTFMAEMLETATILRSATKNSLIIIDELGRGTSTYDGFGLAWAISEHIA 789
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA---------LEQEDNLVLLYQVKPGSC 712
S F LFATHFHE+ L + IP +N V A +DN+VLLY+V+PG
Sbjct: 790 SEIHAFCLFATHFHELTNLDQQIPHVKNFHVVAHVNKDAGGESASKDNIVLLYRVEPGVS 849
Query: 713 VKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+S+G+H A++A +PED+++ AR +E E
Sbjct: 850 DQSFGIHVAELANFPEDVVKLARKNAEELE 879
>gi|357626320|gb|EHJ76450.1| putative mutS-like protein 2 [Danaus plexippus]
Length = 877
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 282/769 (36%), Positives = 438/769 (56%), Gaps = 81/769 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL-PAEYLNDNKNKIVTILDR 147
VG+A V + + E DD ++ LE+I+VQ +P EC+ PA+ ND K + ++DR
Sbjct: 95 VGIACVYQNDYTLSVSEFTDDVDFTQLESIVVQVAPSECVAAPAD--NDYK-ALKKVMDR 151
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
V +T KK+EF+ E L+QD+NRL++F + + K+A E L A L + + Y L
Sbjct: 152 ASVTVTKVKKSEFTTEGLIQDLNRLLKFKEDQQKDANGFQETKLPVAMSALAAAVRYTSL 211
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+N++ N +F I S+ + Y+ + S+ +S+L+V P+ G T+ S+ G+LDRCRT G
Sbjct: 212 LNDDTNFGRFRISSVK-ADYLQLDSSALSALNVFPELGDTNTSPTRSIYGLLDRCRTQHG 270
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL Q ++QPL+D++ I ER + +LV++++ R+ LHE LR +PD+Q+LA R+ RKK
Sbjct: 271 KRLLCQLLRQPLRDINLINERLDIIQLLVSSSQMRLQLHEDHLRRMPDLQALARRLARKK 330
Query: 328 AGLKDCYRVYEGVSQL------------PKLISIL-----------ESLVQNVE------ 358
AGL+DCYR+Y+ ++++ P + S+L E Q +E
Sbjct: 331 AGLQDCYRIYQAINRIPVLLKCLSEFNDPTIHSVLCEPIAELNNDLEKFQQMIETTIDLE 390
Query: 359 ------ASNL-----NTILSSLQSLKMMDRK----------------------DAVMDKM 385
A NL + L L SL+ R+ + + +
Sbjct: 391 AVDRDRALNLHLGCKSQALLELLSLQRWTRRPNGDFLVKPSFDEELQVLANDLEKLQNSA 450
Query: 386 KEYLESTARRLNLVADKTIKLENSPQ-GFAYR---ITMKLNNSIDDRYTILDTVRGGVRF 441
++ L AR L++ A KTIKLEN+PQ GF +R + ++ D +YTI+D ++GGVRF
Sbjct: 451 EKELNKAARDLDMEAGKTIKLENNPQHGFVFRYYILGVEGFLKKDLKYTIVDAIKGGVRF 510
Query: 442 QDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIA 501
++ L Y + YE Q +V E+I I++ Y++ L LS+++++ DVLVS S+
Sbjct: 511 RNSCLGDITENYLQAKAAYEKEQDKVVAEIINIASTYSECLYCLSNIISKLDVLVSLSVV 570
Query: 502 STCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
++ + Y RP + LVL RHP +ELQ GVSYIPNDV + ++VTG N
Sbjct: 571 ASTSSSKYTRPVL-TTSIQDLVLKDVRHPCLELQEGVSYIPNDVVLERDSSLMHIVTGAN 629
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKST++RS GV+V LA +G FVP + A I ++ + R+GA+D + +G STFM+EM E
Sbjct: 630 MGGKSTWMRSCGVAVILAHVGSFVPAEYAKIPILRSLCARIGASDREEKGQSTFMLEMLE 689
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA +++ T +SLV+IDELGRGTST++G G+A +IA +L+ Q F LFATH+HE+ L+
Sbjct: 690 TAGILRNATADSLVLIDELGRGTSTYEGCGIAWAIAEKLSKEIQCFCLFATHYHELTRLA 749
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY 741
N Q A + LVLL++V G KS G+H AK+A PED+L+ A + E
Sbjct: 750 SCGSRVVNSQALADVVDGRLVLLHRVVQGPAAKSLGLHVAKIADLPEDILQFAEEKQAEL 809
Query: 742 EYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKDTN 790
E L E+ R E+ EG+ + +FL +C + ++ +++
Sbjct: 810 ETDL-----CEVESEVRSED----TSEGQAFIKEFLIKCKQIQEKNESD 849
>gi|336363101|gb|EGN91554.1| hypothetical protein SERLA73DRAFT_164445 [Serpula lacrymans var.
lacrymans S7.3]
Length = 888
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/794 (34%), Positives = 435/794 (54%), Gaps = 73/794 (9%)
Query: 76 SEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLN 135
S DKT T TVG+A D ++ + + D+D +SN E++I+Q S KE L+P +
Sbjct: 83 SADKTK----TKTVGIAFADTSIRQLGVADFVDNDLFSNTESLIIQLSVKEALIPTGTAS 138
Query: 136 DNK------NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFD---DSELKNARLL 186
N NK+ +L+R V +T +K +EF+ +++ D+ +L+ D + + N + +
Sbjct: 139 GNTDRDIDLNKLKAVLERCGVVITEKKPSEFTAKNIEDDLMKLLVQDPGSSATVGNPQTI 198
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
++ L A L +L+NYL L+ + N FSI + D S+Y+ + ++ + +L++ GS
Sbjct: 199 SQLSLPVAPSALSALVNYLSLLTDPSNHGAFSIRTHDLSQYMRLDASALRALNLTEPPGS 258
Query: 247 TSAQTYDS-LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
+ ++ LLG+L++C+T QG RLL W+KQPL +L I +R V + V+++ R NL
Sbjct: 259 AGSINRNATLLGLLNKCKTAQGTRLLGSWLKQPLVNLHEIQKRQNLVEMFVDDSSTRRNL 318
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE----------SLVQ 355
+ L+ +PDM ++ R + A L+D RVY+ V ++P LI+ LE SL++
Sbjct: 319 QDDFLKFMPDMHRISKRFKKSAASLEDVVRVYQVVLKIPGLIANLEGTQTEQDDYKSLLE 378
Query: 356 NVEASNLNTI----------------LSSLQSLKMMDRKD-------------AVMDKMK 386
+ + L L + K + + D + D +
Sbjct: 379 EIYLKDFREFNENLCKYGEMVEQTLDLDELDNHKYVIKPDYDPRLQELANKLIEIRDGLD 438
Query: 387 EYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQD 443
+ L+L DK + LENS G+ +R+T ++ ++ Y L TV+ GV F
Sbjct: 439 QEHREVGNDLDLELDKKLHLENSQNYGYCFRLTKNDAKAVINKRKYIELGTVKSGVFFTT 498
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
L YQ Y Q +V+EV+ I+A YT L L V+A DV++SF+ S
Sbjct: 499 KTLKELAGDYQETTDTYSRTQSGLVKEVVNIAATYTPVLEALDHVIAHLDVILSFAHVSV 558
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP+PYV+P M GTG+L+L + RHP +E+Q +S+IPNDV E F ++TGPNMG
Sbjct: 559 NAPEPYVKPVMLEKGTGNLILKEARHPCLEVQDDISFIPNDVEMIKDESEFQIITGPNMG 618
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR +GV +AQ GCFVPC A + + D + RVGA DSQ +G+STFM EM ETA
Sbjct: 619 GKSTYIRQVGVIALMAQTGCFVPCSEAHVPIFDSVLCRVGAGDSQLKGVSTFMAEMLETA 678
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
T++K T++SL+IIDELGRGTST+DGFG+A +I+ +AS + F LFATHFHE+ L +
Sbjct: 679 TILKSATKDSLIIIDELGRGTSTYDGFGLAWAISEHIASQIRAFCLFATHFHELTALDQE 738
Query: 684 IPTFRNVQVSA-LEQED--------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
+ +N+ V A + Q D ++ LLY+V+PG +S+G+H AK+A +PE++++ A
Sbjct: 739 LSHVKNLHVVAHVTQGDDEVASLNQDITLLYKVEPGVSDQSFGIHVAKLANFPENVVKLA 798
Query: 735 RDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMF-DFLQQCLSLSKQKDTNRIL 793
+ E E G + E ++ V E ++ + LQ S + + D + I+
Sbjct: 799 KRKADELE-------DFGTDKVQTEPQFSPAVTENGIKIIEELLQNWASKTSEPDGDVIM 851
Query: 794 HLQETQEPGIEEYQ 807
T +EE +
Sbjct: 852 SDDSTSAAQLEELR 865
>gi|353237857|emb|CCA69819.1| probable DNA mismatch repair protein MSH2 [Piriformospora indica
DSM 11827]
Length = 926
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 294/873 (33%), Positives = 449/873 (51%), Gaps = 120/873 (13%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKS- 63
P K T+R F R ++Y HG DA I + ++N V +K++G+K L +V ++ +
Sbjct: 19 LPAKRDDTVRLFERGDYYTAHGADAHFIAQEVYRTNSV--IKSLGKKAAPLPSVTLSSTL 76
Query: 64 ----------------------------------------NLSCFSHILCVISEDKTLET 83
NL ++ ++ T
Sbjct: 77 AKEFLRDALTIKQLKIEIWVPEGGKKSAAKFELSRQASPGNLQEVEDLIFANTDMTTAPI 136
Query: 84 VLT---------NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAE-- 132
VL+ T+G A D +K + + ++D + NLE++IVQ KEC++ E
Sbjct: 137 VLSIRIAKVDNIRTIGTAFADATIRKIGVSQFAENDLFGNLESLIVQLGVKECIMQTEGK 196
Query: 133 YLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+ + +K+ +L+R +T RK EFS +D+ QD+ RL+ S + LP L
Sbjct: 197 TADYDLSKLRQVLERCNTVVTERKPVEFSTKDVEQDLTRLL----SGNQQVTALPVFDLR 252
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A LI YL+LM + N +++ D +Y+ + ++ + +L +LP G SA
Sbjct: 253 VAMSATAGLIRYLDLMRDSSNFGHYTLSQYDLGQYMRLDASAIQALTLLPGPGD-SATKN 311
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
S+LG+L++C+T QG RLL QW+K PL +L I R V I V ++ +R L + LR
Sbjct: 312 TSVLGLLNKCKTAQGGRLLGQWLKLPLVNLHEINRRLNLVEIFVKDSSSRRALQDDFLRY 371
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL---------------------- 350
+PDM + R +K A L+D RVY+ ++P LI L
Sbjct: 372 MPDMHRICKRFHKKVASLEDVIRVYQAAIRVPDLIEKLNDIDTEEYADSVLIAEQYTTAF 431
Query: 351 -----------ESLVQNVEASNLNT---ILS-----SLQSLKMMDRKDAVMDKMKEYLES 391
E + Q ++ L I+ LQSL D+ V+ + E E
Sbjct: 432 QKFDDNITKFKEMVEQTIDLDQLKNHQYIIKPDYDEQLQSL--ADQIAEVVSALDEEHER 489
Query: 392 TARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLAT 448
+R L L DK + LEN+P G+ +R++ + ++ + YT L T + GV F L
Sbjct: 490 VSRDLGLDMDKKLHLENNPTHGYCFRVSKNDSKVVEKKKDYTELSTQKAGVLFTTKTLKR 549
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+ +Y ++ Y Q ++V EV+ I++GYT L + D++A DV+VSF+ S AP
Sbjct: 550 HSVEYSELRERYNRVQSTLVAEVVSIASGYTPVLEAVDDIIAHLDVIVSFAHVSANAPSN 609
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
YV+P + GTG+L+L + RHP +E+Q +S+IPNDV G+ F+++TGPN GGKSTY
Sbjct: 610 YVKPVVTEKGTGNLLLKEARHPCLEVQEDISFIPNDVEMIRGKSEFHIITGPNTGGKSTY 669
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
R IGV +AQ+GCFVPC+SA I + D I RVGA DSQ +G+STFM EM E+A ++K
Sbjct: 670 ARQIGVIALMAQVGCFVPCESAEIPIFDCILARVGAGDSQLKGVSTFMAEMLESAAILKT 729
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR 688
T NSL+IIDELGRGTST DGFG+A +I+ +A+ + F LFATHFHE+ LS+ IP +
Sbjct: 730 ATPNSLIIIDELGRGTSTADGFGIAWAISEYIATTIRAFCLFATHFHELTTLSQQIPHVK 789
Query: 689 NVQVSAL------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
N V A +E + LLY+V+ G +S+G+H A++ +PE +++ A+ +E E
Sbjct: 790 NAHVVAHVSEGEGSKEKEITLLYKVEEGPSDQSFGIHVAQLCNFPESVVKHAKRKAEELE 849
Query: 743 ---YSLDTKTPSG---DETNNREEEYFKTVQEG 769
DT S DE EE+F+ G
Sbjct: 850 DFGNEGDTMMFSKADIDEGTKIVEEFFRDFANG 882
>gi|449543819|gb|EMD34794.1| hypothetical protein CERSUDRAFT_125339 [Ceriporiopsis subvermispora
B]
Length = 971
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 298/929 (32%), Positives = 466/929 (50%), Gaps = 137/929 (14%)
Query: 1 HKFYLFFF---PQKSKT--TIRFFNRVEFYCVHGEDA----------------------- 32
H + FF P+KS T+R F R E+Y HG DA
Sbjct: 21 HPGFCSFFAKLPKKSPEDGTLRLFYRNEYYSAHGPDALYVATHVFRTNTVIKYLGPGGRA 80
Query: 33 ------------------ELIQRKSNVVYLVKTMGQKDKT----------------LETV 58
L R+ V V GQ K +E +
Sbjct: 81 GLPSVILGEAKAVEFLREALTSRQLKVEIWVPEAGQGKKATKFRLDKEASPGNLQAVEDL 140
Query: 59 LVNKSNLSCFSHILCV-----ISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYS 113
L S++ ++ V IS ++++ T +VGVA D ++ + + D+D +S
Sbjct: 141 LFGNSDIMAAPIVMAVKVTSSISAGESVKAK-TKSVGVAFADATVREIGVADFVDNDVFS 199
Query: 114 NLEAIIVQKSPKECLLPAEYLNDNK------NKIVTILDRNKVCMTGRKKNEFS----EE 163
NLE +++Q S KE L+P + K+ +LDR V +T RK +EF+ ++
Sbjct: 200 NLETLVIQLSVKEALIPTGTASGTTERDLELKKLKDVLDRCGVVITERKPSEFTTKNVQD 259
Query: 164 DLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSID 223
DLM+ +N S + + +P++ L A L +LI+YL LM++ N ++I + D
Sbjct: 260 DLMRLLNPSSIPSSSSVDASLTIPQLSLPVAPSALSALISYLSLMSDPTNHGAYTIRTHD 319
Query: 224 YSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLD 283
S+++ + ++ + +L++ G+ + +L G+L++C+T QG RLLA W+KQPL +L
Sbjct: 320 LSQFMKLDASALRALNLTEAPGNIGSNKNTTLFGLLNKCKTAQGSRLLAAWLKQPLVNLH 379
Query: 284 AIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQL 343
I +R V + V ++ AR L + LR +PDM + R + A L+D RVY+ V +L
Sbjct: 380 EIRKRQNLVELFVTDSNARRTLQDDFLRMMPDMHRICKRFQKSAASLEDVVRVYQAVLKL 439
Query: 344 PKLISILESLVQNVEASNLNTILSSL--------------------QSL----------- 372
LIS L+ L + + +L ++ + Q+L
Sbjct: 440 EGLISSLDGL-ETTDQDHLKALIDEMYLTKLREYETSLSKYAEMVEQTLDLDELENHNFV 498
Query: 373 ----------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKL 421
K+ ++ + D + + A L+L DK + LENSP G+ +R+T
Sbjct: 499 IKPDFDERLQKLAEKLREIRDGLDSQHRAVANDLDLELDKKLHLENSPVHGYCFRVTKND 558
Query: 422 NNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
I +Y L T++ GV F L QYQ Y Q +V+EV+ I++ YT
Sbjct: 559 ARVITGKKKYPELGTLKSGVFFTTTPLRELANQYQETTDAYSRTQSGLVKEVVNIASTYT 618
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVS 539
L + V+A DV++S + + AP+ YV+P + G+GSL+L + RHP +E+Q +S
Sbjct: 619 PVLEAWNGVIAHLDVIISLAHVAVNAPEAYVKPTLLEKGSGSLILKEARHPCLEVQDDLS 678
Query: 540 YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIF 599
+IPNDV E F ++TGPNMGGKSTYIR +GV +AQ G FVPC A + V D I
Sbjct: 679 FIPNDVEMIKDESEFQIITGPNMGGKSTYIRQVGVIALMAQAGSFVPCSEARVPVFDSIL 738
Query: 600 TRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARE 659
RVGA DSQ +GISTFM EM ETAT+++ +++SL+IIDELGRGTST+DGFG+A +I+
Sbjct: 739 CRVGAGDSQLKGISTFMAEMLETATILRSASKDSLIIIDELGRGTSTYDGFGLAWAISEH 798
Query: 660 LASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA-------LEQEDNLVLLYQVKPGSC 712
+AS F LFATHFHE+ L + +P +N+ V A ++ + LLY+V+PG C
Sbjct: 799 IASQIHAFCLFATHFHELTALDQEVPHVKNLHVVAHVSNSDEAARDREITLLYKVEPGIC 858
Query: 713 VKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQ 772
+S+G+H A++A +PE++++ A+ E E D T E N E + V+EG
Sbjct: 859 DQSFGIHVAELANFPENVVKLAKRKADELE---DFNT----EHNGDAELPPEVVEEGTQL 911
Query: 773 MFDFLQQCLSLSKQKDTNRILHLQETQEP 801
+ +FL+ + + D I+ E P
Sbjct: 912 VEEFLRTWAAHTPATDGEDIVMADEDTSP 940
>gi|347836210|emb|CCD50782.1| similar to DNA mismatch repair protein msh-2 [Botryotinia
fuckeliana]
Length = 923
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 287/878 (32%), Positives = 448/878 (51%), Gaps = 111/878 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDA---------------------------- 32
F FF PQ+ TIR F+R +FY HG+DA
Sbjct: 15 FIKFFTNLPQRDGETIRVFDRGDFYTAHGDDATFIARTVYKTTSVLRDLGSNSTKIPSVT 74
Query: 33 -----------ELIQRKSNVVYLVKTMGQKDKTLETVLVNKSNL--------SCFSHILC 73
E + R V + T G+ + + T + NL F
Sbjct: 75 MTVTVYKNFLREALYRMGKRVEIFTTSGRNNWKV-TKTASPGNLQDVEEELGGSFDAAPI 133
Query: 74 VISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
+++ + + +GV D ++ + E D+D YSN E++++Q KECL+ +
Sbjct: 134 ILAVKVSAKASEARNIGVCFADASVRELGVSEFLDNDLYSNFESLLIQLGVKECLIQVDR 193
Query: 134 LNDNK--NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCL 191
+ K+ I++ T R F +D+ QD+ RL++ + K+ ++P+ L
Sbjct: 194 TTKDVELQKLKQIIENCGCAWTERAGGTFGTKDIEQDLARLLK----DEKSTGVIPQTDL 249
Query: 192 TTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT 251
A +LINYL ++++ N Q+ ++ D S+++ + ++ + +L+++P G
Sbjct: 250 KLAMGSAAALINYLGVLHDNSNFGQYQLYQHDLSQFMKLDASALKALNLMP--GPRDGSK 307
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+L+ C+TP G RLLAQW+KQPL L+ I +R V V + E + + E +R
Sbjct: 308 TMSLYGLLNHCKTPVGSRLLAQWLKQPLMSLEEIEKRQQLVEAFVEDQELKQTIQETHMR 367
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ---------------- 355
+PD+ LA R +K A L+D R Y+ V ++P LI LE ++
Sbjct: 368 SIPDLYRLAKRFQKKLANLEDVVRAYQVVIRIPDLIKTLEDVMDEKYRDALDEAYTDKLR 427
Query: 356 --NVEASNLNTILSSLQSLKMMDRKDAV---------------MDKMKEYLES----TAR 394
NV NL ++ + L+ MD + + +DK+K ++ A+
Sbjct: 428 GCNVSLGNLAEMVETTVDLEAMDNHEYIIKPEFDDSLNIIRRKLDKLKYEMDQEFRIVAK 487
Query: 395 RLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANT 451
L +K I LEN+ G+ R+T + I ++ Y T + GV F +L +
Sbjct: 488 DLGQEIEKKIFLENNKVHGWCMRLTRTEASCIRNKSKYQECQTQKNGVYFTTSKLLSIRR 547
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
++ + Y Q S+V EV+ +A Y + QL+ VLA DV+VS + S AP YVR
Sbjct: 548 EFDQLSENYNRTQSSLVNEVVATAASYCPVIEQLASVLAHLDVIVSLAHTSAHAPTSYVR 607
Query: 512 PCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
P M P GTGS +L + RHP +E+Q V +I NDV E SF ++TGPNMGGKSTYIR
Sbjct: 608 PKMHPRGTGSTILKEARHPCMEMQDDVQFITNDVSLIREESSFLIITGPNMGGKSTYIRQ 667
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
IGV +AQIGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T
Sbjct: 668 IGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATS 727
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
SL+IIDELGRGTST+DGFG+A +I+ + F++FATHFHE+ L+ P +N+
Sbjct: 728 ESLIIIDELGRGTSTYDGFGLAWAISEYIVREIGAFSMFATHFHELTALADTFPQVKNLH 787
Query: 692 V--------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE- 742
V S+ E++ + LLY+V+ G C +S+G+H A++ +PE ++ AR +E E
Sbjct: 788 VVAHIDTEPSSQERKREVTLLYKVEEGICDQSFGIHVAELVKFPEKVIGMARRKAEELED 847
Query: 743 YSLDTKTPSGDETNNREEEYFKT-VQEGEYQMFDFLQQ 779
+ K +GD ++ +EY K V+EG + D L++
Sbjct: 848 FGTSVKADNGDPSS---QEYAKEDVEEGSRLLKDILKK 882
>gi|358368332|dbj|GAA84949.1| DNA mismatch repair protein Msh2 [Aspergillus kawachii IFO 4308]
Length = 944
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 273/749 (36%), Positives = 416/749 (55%), Gaps = 69/749 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL--LPAEYLNDNKNKIVTIL 145
+VGV D ++ + E D+D YSNLE++++Q KECL + A + K+ I+
Sbjct: 161 SVGVCFADASVRELGVSEFLDNDVYSNLESLVIQLGVKECLVQMDAGRKDVELGKVRNIM 220
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
D + ++ R+ +F D+ QD+ RL+R + ++A LP+ L A +LI YL
Sbjct: 221 DSCGIAVSERQSGDFGVRDIEQDLTRLLR----DERSAGTLPQTELKLAMGSAAALIKYL 276
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+M + N Q+ ++ D S+++ + S+ + +L+++P G SL G+L+ C+TP
Sbjct: 277 GVMTDPSNFGQYRLYQHDLSQFMKLDSSALRALNLMP--GPRDGSKSMSLFGLLNHCKTP 334
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLLAQW+KQPL D D I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 335 VGSRLLAQWLKQPLMDKDEIEKRQQLVESFVMDTELRQTMQEEHLRSIPDLYRLAKRFQR 394
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQN-----VEAS----------NLNTI----- 365
K+A L+D RVY+ +LP ++ LE+++ +EA NL +
Sbjct: 395 KQATLEDVVRVYQVAIRLPGFVASLENVMDEQYQTPLEAEYTSKLRSHSDNLAKLEEMVE 454
Query: 366 ----LSSL------------QSLKMMDRKDAVMDKMKEYLESTARR----LNLVADKTIK 405
L +L +SL+++ +K +DK++ ++S RR L+ DK +
Sbjct: 455 TTVDLDALENHEFIIKPEFDESLRIIRKK---LDKLRHDMDSEHRRVGRDLDQEVDKKLF 511
Query: 406 LENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
LEN G+ +R+T I ++ Y T + GV F + ++ + Y
Sbjct: 512 LENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSSNYNR 571
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q +V EV+G++A Y L QL+ VLA DV+VSF+ + AP PYVRP + P GTG+
Sbjct: 572 TQTGLVSEVVGVAASYCPVLEQLAGVLAHLDVIVSFAHCAVHAPTPYVRPRIHPRGTGNT 631
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
+L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ G
Sbjct: 632 ILKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTG 691
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGR
Sbjct: 692 CFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGR 751
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL------ 695
GTST+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 752 GTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKSAKNLHVVAFIGDGTG 811
Query: 696 ------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT 749
+ D + LLY+V+PG C +S+G+H A++ +PE ++ AR E E +
Sbjct: 812 DEESKDSKRDQVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKADELE-DFTSSG 870
Query: 750 PSGDETNNREEEYFK-TVQEGEYQMFDFL 777
G E+N ++Y + V+EG + D L
Sbjct: 871 AQGQESNMTLDKYSQEEVEEGSALLKDML 899
>gi|336388191|gb|EGO29335.1| hypothetical protein SERLADRAFT_433333 [Serpula lacrymans var.
lacrymans S7.9]
Length = 904
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 276/796 (34%), Positives = 435/796 (54%), Gaps = 75/796 (9%)
Query: 76 SEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLE--AIIVQKSPKECLLPAEY 133
S DKT T TVG+A D ++ + + D+D +SN E ++I+Q S KE L+P
Sbjct: 97 SADKTK----TKTVGIAFADTSIRQLGVADFVDNDLFSNTEIKSLIIQLSVKEALIPTGT 152
Query: 134 LNDNK------NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFD---DSELKNAR 184
+ N NK+ +L+R V +T +K +EF+ +++ D+ +L+ D + + N +
Sbjct: 153 ASGNTDRDIDLNKLKAVLERCGVVITEKKPSEFTAKNIEDDLMKLLVQDPGSSATVGNPQ 212
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ 244
+ ++ L A L +L+NYL L+ + N FSI + D S+Y+ + ++ + +L++
Sbjct: 213 TISQLSLPVAPSALSALVNYLSLLTDPSNHGAFSIRTHDLSQYMRLDASALRALNLTEPP 272
Query: 245 GSTSAQTYDS-LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
GS + ++ LLG+L++C+T QG RLL W+KQPL +L I +R V + V+++ R
Sbjct: 273 GSAGSINRNATLLGLLNKCKTAQGTRLLGSWLKQPLVNLHEIQKRQNLVEMFVDDSSTRR 332
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE----------SL 353
NL + L+ +PDM ++ R + A L+D RVY+ V ++P LI+ LE SL
Sbjct: 333 NLQDDFLKFMPDMHRISKRFKKSAASLEDVVRVYQVVLKIPGLIANLEGTQTEQDDYKSL 392
Query: 354 VQNVEASNLNTI----------------LSSLQSLKMMDRKD-------------AVMDK 384
++ + + L L + K + + D + D
Sbjct: 393 LEEIYLKDFREFNENLCKYGEMVEQTLDLDELDNHKYVIKPDYDPRLQELANKLIEIRDG 452
Query: 385 MKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRF 441
+ + L+L DK + LENS G+ +R+T ++ ++ Y L TV+ GV F
Sbjct: 453 LDQEHREVGNDLDLELDKKLHLENSQNYGYCFRLTKNDAKAVINKRKYIELGTVKSGVFF 512
Query: 442 QDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIA 501
L YQ Y Q +V+EV+ I+A YT L L V+A DV++SF+
Sbjct: 513 TTKTLKELAGDYQETTDTYSRTQSGLVKEVVNIAATYTPVLEALDHVIAHLDVILSFAHV 572
Query: 502 STCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
S AP+PYV+P M GTG+L+L + RHP +E+Q +S+IPNDV E F ++TGPN
Sbjct: 573 SVNAPEPYVKPVMLEKGTGNLILKEARHPCLEVQDDISFIPNDVEMIKDESEFQIITGPN 632
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQ GCFVPC A + + D + RVGA DSQ +G+STFM EM E
Sbjct: 633 MGGKSTYIRQVGVIALMAQTGCFVPCSEAHVPIFDSVLCRVGAGDSQLKGVSTFMAEMLE 692
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TAT++K T++SL+IIDELGRGTST+DGFG+A +I+ +AS + F LFATHFHE+ L
Sbjct: 693 TATILKSATKDSLIIIDELGRGTSTYDGFGLAWAISEHIASQIRAFCLFATHFHELTALD 752
Query: 682 RVIPTFRNVQVSA-LEQED--------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+ + +N+ V A + Q D ++ LLY+V+PG +S+G+H AK+A +PE++++
Sbjct: 753 QELSHVKNLHVVAHVTQGDDEVASLNQDITLLYKVEPGVSDQSFGIHVAKLANFPENVVK 812
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMF-DFLQQCLSLSKQKDTNR 791
A+ E E G + E ++ V E ++ + LQ S + + D +
Sbjct: 813 LAKRKADELE-------DFGTDKVQTEPQFSPAVTENGIKIIEELLQNWASKTSEPDGDV 865
Query: 792 ILHLQETQEPGIEEYQ 807
I+ T +EE +
Sbjct: 866 IMSDDSTSAAQLEELR 881
>gi|395331444|gb|EJF63825.1| DNA mismatch repair protein [Dichomitus squalens LYAD-421 SS1]
Length = 964
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 289/861 (33%), Positives = 442/861 (51%), Gaps = 123/861 (14%)
Query: 3 FYLFFFPQKSKT-TIRFFNRVEFYCVHGEDAE-----LIQRKSNVVYL------------ 44
F+ P+ +T T+R F R E+Y VHG DA L + S + YL
Sbjct: 26 FFAKLPPKSPETGTVRLFFRNEYYSVHGPDAHYVATHLFRTNSVIKYLGGRAGLPSVTLS 85
Query: 45 ----------------------VKTMGQKDKTLETVL---VNKSNLSCFSHILCVISEDK 79
GQ K + VL + NLS +L V ++
Sbjct: 86 ESLAKSFLRDALTSKQLKVEIWAPEAGQGKKATKFVLDKEASPGNLSAVEDLLFVNTDIV 145
Query: 80 TLETVL-----------------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQK 122
+ V+ T VGVA D T++ + + D+D +SN E +I+Q
Sbjct: 146 SAPIVMAIKIASTPAVPGSTAVKTKAVGVAYADSSTRELGVADFVDNDLFSNTETLIIQL 205
Query: 123 SPKECLLPAEYLNDNK------NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVR-- 174
S KE ++P + K+ +LDR V +T RK ++F+ +++ D+ RL+
Sbjct: 206 SVKEAIIPTGTNSGTTERDFDLKKLKEVLDRCGVVITERKPSDFTVKNINDDLVRLLNAS 265
Query: 175 -FDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSA 233
S +A +P++ L TA L +L++YL L+++ N +SI + D S+Y+ + ++
Sbjct: 266 AMPSSSTDSAATIPQLSLPTAPAALSALVSYLSLLSDPSNHGAWSIRTHDLSQYMRLDAS 325
Query: 234 VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVN 293
+ +L++ G+ + +L G+L++C+T QG RLL W+KQPL + I+ R + V
Sbjct: 326 ALRALNLTEAPGNIGSNKNTTLFGLLNKCKTAQGSRLLGSWLKQPLVNRHDILRRQSLVE 385
Query: 294 ILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES- 352
+ R L + L+ +PDM + R + A L+D RVY+ V +L IS +ES
Sbjct: 386 AFFEDANTRRILQDDYLKLMPDMHRICKRFQKSIASLEDVVRVYQAVLKLEGFISTIESM 445
Query: 353 -------------------------------LVQNV----EASNLNTIL-----SSLQSL 372
+VQ E N N ++ + LQSL
Sbjct: 446 ETSSEDQKALLKEIYLTKLKEFDGSLSKYSEMVQQTLDLDELENHNFVIKPDYDARLQSL 505
Query: 373 KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRIT---MKLNNSIDDR 428
D+ V D + + L L DK + LENSP G+ +RI+ +KL + R
Sbjct: 506 --ADKLAEVRDGLDAEHRKVGKALGLELDKKLHLENSPTYGYCFRISKNDVKLLHDDKKR 563
Query: 429 YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDV 488
Y L ++ GV F L +T++ I +Y Q +V+EV+ I++ YT L L++V
Sbjct: 564 YIELGALKSGVFFTTPTLKGLSTEHTEITEQYSRTQSGLVKEVVNIASTYTPVLEALNNV 623
Query: 489 LAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFK 548
+A DV VS + + AP+ YV+P + G+GSLVL + RHP +E+Q +S+IPNDV
Sbjct: 624 IAHLDVTVSLAHVAVNAPETYVKPEILARGSGSLVLKEARHPCLEVQDDLSFIPNDVEMI 683
Query: 549 SGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQ 608
E F ++TGPNMGGKSTYIR +GV +AQ G FVPC SA I + D I RVGA DSQ
Sbjct: 684 KDESEFQIITGPNMGGKSTYIRQVGVIALMAQTGSFVPCASARIPIFDSILCRVGAGDSQ 743
Query: 609 YRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFT 668
+GISTFM EM ETAT+++ T++SL+IIDELGRGTST+DGFG+A +I+ +AS F
Sbjct: 744 LKGISTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEHIASQIHAFC 803
Query: 669 LFATHFHEIALLSRVIPTFRNVQVSALEQED-------NLVLLYQVKPGSCVKSYGVHCA 721
+FATHFHE+ L + I +N+ V A + ++ LLY+V+PG C +S+G+H A
Sbjct: 804 MFATHFHELTALDQEISHVKNLHVVAHVSDSEEGGGDRDITLLYKVEPGVCDQSFGIHVA 863
Query: 722 KMAGYPEDMLEQARDLMKEYE 742
++A +PE +++ AR +E E
Sbjct: 864 ELANFPESVVKLARKKAEELE 884
>gi|302681541|ref|XP_003030452.1| hypothetical protein SCHCODRAFT_257642 [Schizophyllum commune H4-8]
gi|300104143|gb|EFI95549.1| hypothetical protein SCHCODRAFT_257642 [Schizophyllum commune H4-8]
Length = 965
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 269/785 (34%), Positives = 425/785 (54%), Gaps = 67/785 (8%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK------NKI 141
TVGVA D ++ + + D++ YSN E++I+Q KE ++P + NK+
Sbjct: 172 TVGVAYADTSLRELGVADFVDNELYSNTESLIIQLGVKEAVIPMGTSSGTSERDLDLNKL 231
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLV--RFDDSELKNARLLPEMCLTTATHCLR 199
++LDR V +T RK +EF ++++ DV RL+ S +PE+ L A L
Sbjct: 232 RSVLDRCGVVITERKPSEFRDKNVADDVPRLLVATPGTSTADPTATIPELSLPNAKGALN 291
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG-STSAQTYDSLLGI 258
+L+ YL L+ + N N ++I + D +Y+ + ++ + +L+++ G S + +LLG+
Sbjct: 292 ALLGYLSLLADPANHNAWTIRTHDLEQYMKLDASALRALNLVDMTGQSGQSNKNTTLLGL 351
Query: 259 LDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQS 318
L++C+T QG R+L W+KQPL +L I +R V I ++ AR L + L+ +PDM
Sbjct: 352 LNKCKTAQGTRMLGTWLKQPLVNLHEIQKRQELVQIFFDDANARQTLQDEYLKMMPDMHR 411
Query: 319 LAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES----------LVQNVEASNLNTILSS 368
L R + A L++ RVY+ + +LP +I LE+ L++ L +S
Sbjct: 412 LGRRFQKGLATLENVVRVYQVILKLPGMIEALEAVRTETPEHQALIEETYLRELRDKEAS 471
Query: 369 LQSLKMMDRKDAVMDKMK-------------------------EYLESTARR----LNLV 399
L M + +D++ E L+ RR LN+
Sbjct: 472 LSKYSQMVEQTLDLDQLDNHNYVVKPDYDEQLQELHNKLQEATEKLDQEHRRVGEDLNIE 531
Query: 400 ADKTIKLENSPQ-GFAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLATANTQYQA 455
DK + LEN+P G+ +R+T I D+Y L T + GV F +L TA ++
Sbjct: 532 LDKKLHLENNPTYGYCFRLTKNDAKGITNKKDKYIELATNKSGVYFVTKKLKTAAADHKE 591
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
+ + Y Q +V+E++ I+A YT + L V+A DV++SF+ S AP YV+P +
Sbjct: 592 LTQAYSRKQSGLVKEIVAIAATYTSVMESLDSVIAHLDVIISFAHVSVNAPVTYVKPKVV 651
Query: 516 PMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
G GSL+L + RHP +E+Q V++IPNDV + F ++TGPNMGGKSTYIR +GV
Sbjct: 652 ERGNGSLILKEARHPCLEVQDEVNFIPNDVEMIKDKSEFQIITGPNMGGKSTYIRQVGVI 711
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
+AQ GCFVPCD AT+ + D + RVGA DSQ +G+STFM EM ETAT+++ T++SL+
Sbjct: 712 ALMAQTGCFVPCDKATLPIFDSVLCRVGAGDSQLKGVSTFMAEMLETATILRSATKDSLI 771
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
IIDELGRGTST+DGFG+A +I+ +AS F LFATHFHE+ L + +P N+ V A
Sbjct: 772 IIDELGRGTSTYDGFGLAWAISEHIASQIHAFCLFATHFHELTALDQQLPHVTNLHVVAH 831
Query: 696 EQED------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-YSLDTK 748
D ++ LLY+V+PG +S+G+H A++A +PE++++ A+ E E + + K
Sbjct: 832 VSGDSSGDTSDITLLYKVEPGVSDQSFGIHVARLANFPENVVKLAKRKADELEDFGSEDK 891
Query: 749 TPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKDTNRILHLQETQEPGIEEYQS 808
+ + EE K V+ D L+Q +D + + ++ E +EE +
Sbjct: 892 RSAPEAPPEVTEEGLKIVE-------DLLKQWAGEPDGEDV-EMADVDDSPEAQLEELKK 943
Query: 809 FDKVH 813
H
Sbjct: 944 IVNAH 948
>gi|345568246|gb|EGX51143.1| hypothetical protein AOL_s00054g519 [Arthrobotrys oligospora ATCC
24927]
Length = 926
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 283/838 (33%), Positives = 433/838 (51%), Gaps = 115/838 (13%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKTLE------TV 58
P K TIR F R +FY VHGEDA+ + + K+N V +K++G TL+ TV
Sbjct: 22 LPAKDSNTIRVFERSDFYTVHGEDAQFVAQHVYKTNSV--LKSLGGGKSTLQSCTLSVTV 79
Query: 59 LVNKSNLSCFSHI-------------------------LCVISED--------------K 79
N + F L + ED K
Sbjct: 80 FRNFLREALFQQGKKIEIWGSQKGRNSWEIIKQASPGNLQDVEEDIAGQLDSSPIVLAVK 139
Query: 80 TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
V VGVA D ++ + E D+D YSN E++++Q KEC++ ND+K
Sbjct: 140 VSAKVDQRVVGVAFADASVRELGVSEFVDNDLYSNFESLLIQLGVKECIIQT---NDSKK 196
Query: 140 -----KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTA 194
K+ +I+DR V +T +K ++F+ +D+ QD+ RL++ DD + + LP+ L A
Sbjct: 197 DVENTKLRSIIDRCGVVITDKKSSDFAGKDVEQDLTRLLK-DDVAVGS---LPQADLKVA 252
Query: 195 THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS 254
+LI YL LM+++ N Q+ ++ D ++Y+ + ++ + +L+++P G S
Sbjct: 253 MCAASALIRYLGLMSDQLNFGQYRLYQHDLAEYMKLDASALKALNLMP--GPRDGSKNMS 310
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
+ G+L++C+T G RLLAQW+KQPL L+ I +RH V V +TE R + E LR +P
Sbjct: 311 VYGLLNKCKTAVGTRLLAQWLKQPLMSLEEIEKRHLLVEAFVEDTELRQTMQEEHLRSVP 370
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ------------------N 356
D+ LA + R A L+D R Y V +LP I LE ++
Sbjct: 371 DLYRLAKKFQRNMANLEDVVRAYMLVIKLPGFIGTLEGVMDEKYKDPLDEVYTRKLREFQ 430
Query: 357 VEASNLNTILSSLQSLKMMDRKDAVM--------------------DKMKEYLESTARRL 396
V+ + L ++ + L+ ++ + ++ D KE+ S + L
Sbjct: 431 VQLAKLEEMVETTVDLEALENHEYIIKPEFDDSLKTIRTKLDSLQRDLGKEH-RSVSNDL 489
Query: 397 NLVADKTIKLENSP-QGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQY 453
DK + LEN G+ +R+T SI + Y + T + GV F D+L++ +
Sbjct: 490 GQEMDKKLFLENHRVHGWCFRLTRNEAGSIRNNRHYREISTQKNGVYFTTDKLSSLRRDF 549
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPC 513
+ Y Q +V+EV+ +++ Y L+ VLA DV+VSF+ S AP PYVRP
Sbjct: 550 DQYTQNYNRTQTGLVQEVVNVASSYCPVFENLAAVLAHLDVIVSFAHVSVHAPSPYVRPT 609
Query: 514 MKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
M P G G+ +L + RHP +E+Q + +I NDV F ++TGPNMGGKSTYIR IG
Sbjct: 610 MHPRGEGNTILKEARHPCMEMQDDIQFITNDVELIRDSSEFLIITGPNMGGKSTYIRQIG 669
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
V +AQ GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETAT++K T S
Sbjct: 670 VIALMAQAGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETATILKSATRES 729
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVS 693
L+IIDELGRGTST+DGFG+A +I+ + + F +FATHFHE+ L P +N+ V
Sbjct: 730 LIIIDELGRGTSTYDGFGLAWAISEYIVKQIKCFAMFATHFHELTALVEEYPVVKNLHVV 789
Query: 694 AL---------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
A E++ + LLY+V G C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 790 AHVGDKNGNDGERKREVTLLYKVSEGVCDQSFGIHVAELVRFPQKVVNMAKRKADELE 847
>gi|367031938|ref|XP_003665252.1| hypothetical protein MYCTH_2308779 [Myceliophthora thermophila ATCC
42464]
gi|347012523|gb|AEO60007.1| hypothetical protein MYCTH_2308779 [Myceliophthora thermophila ATCC
42464]
Length = 873
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/715 (36%), Positives = 390/715 (54%), Gaps = 64/715 (8%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KI 141
+VGV D ++ + E D+D YSN EA+++Q KECL+ E + K+ K+
Sbjct: 73 ARSVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVKECLIHMEKADKEKDPELAKL 132
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
I+D + ++ R +F +D+ QD+ RL++ + ++A LLP+ L A +L
Sbjct: 133 RQIIDNCGIAISERPAADFGTKDIEQDLARLLK----DERSATLLPQTDLKLAMGAASAL 188
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
I YL ++++ N Q+ ++ D ++++ + +A + +L+++P A+T SL G+L+
Sbjct: 189 IKYLGVLHDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMPS-ARDGAKTM-SLFGLLNH 246
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
CRTP G RLLAQW+KQPL D I +R V VN+TE R + E LR +PD+ LA
Sbjct: 247 CRTPLGSRLLAQWLKQPLMDKSEIEKRQQLVEAFVNDTELRQTMQEEHLRAIPDLYRLAK 306
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-----------EASNLNTILSSLQ 370
R RKKA L+D RVY+ +LP + LE ++ + L+ L+ LQ
Sbjct: 307 RFQRKKANLEDVVRVYQVAIRLPGFLGTLEGVMDETYRDPLDEAYTNQLRGLSDSLAKLQ 366
Query: 371 -------------------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTI 404
SL+++ +K D + M A L DK I
Sbjct: 367 EMVETTVDLDALDNHEFIIKPEFDDSLRIIRKKLDKLRTDMNREFADVASDLGQERDKKI 426
Query: 405 KLENSP-QGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
LEN G+ R+T I + RY T + GV F L ++ + + Y
Sbjct: 427 FLENHKVHGWCMRLTRTEAGCIRNKSRYMECSTQKNGVYFTTKTLQGYRREFDQLSQTYN 486
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q +V EV+G++A YT L +L+ +LA DV+VSF+ S AP YVRP + P G G
Sbjct: 487 RTQSGLVNEVVGVAASYTPVLERLAGILAHLDVIVSFAHCSVHAPISYVRPKIHPRGEGQ 546
Query: 522 LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 581
+L + RHP +E+Q V +I NDV + SF ++TGPNMGGKSTYIR IGV +AQI
Sbjct: 547 TILTEARHPCLEMQDDVQFITNDVELTRDKSSFLVITGPNMGGKSTYIRQIGVIALMAQI 606
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
GCFVPC +A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELG
Sbjct: 607 GCFVPCSTAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELG 666
Query: 642 RGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL------ 695
RGTST+DGFG+A +I+ + F LFATHFHE+ L+ P RN+ V+A
Sbjct: 667 RGTSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTALADQYPQVRNLHVTAHISGTDS 726
Query: 696 --------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++ + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 727 SSSKKKTGTEKREVTLLYKVEPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELE 781
>gi|169612762|ref|XP_001799798.1| hypothetical protein SNOG_09508 [Phaeosphaeria nodorum SN15]
gi|160702578|gb|EAT82773.2| hypothetical protein SNOG_09508 [Phaeosphaeria nodorum SN15]
Length = 1234
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 291/905 (32%), Positives = 452/905 (49%), Gaps = 130/905 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKSNVVY----LVKTMGQKDKTLE 56
F FF P+K++ TIR F+R E+Y HGEDA I +N VY +++ +G +D L+
Sbjct: 15 FCKFFRNLPEKNEDTIRIFDRKEYYSAHGEDAVFI---ANTVYKTTAVIRKLG-RDPGLD 70
Query: 57 TVLV--------------------------------------NKSNLSCFSHIL------ 72
+V + + NL L
Sbjct: 71 SVTMTNMVYRNFLRDALFRLSKRIEIWQSPGQRMDWKMAKQASPGNLQDLEEELGGQIEN 130
Query: 73 --CVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL-- 128
+++ T + +VGV D ++ + E D+D YSN E++++Q KECL
Sbjct: 131 APIILAVKVTAKASEARSVGVCFADASVRELGVTEFLDNDLYSNFESLLIQLGVKECLIQ 190
Query: 129 LPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE 188
L A + NK+ TI D + R +F +D+ QD+ RL++ A LP+
Sbjct: 191 LDASKKDIELNKLRTIADNCGCAVAERSATDFGTKDIEQDLPRLLK------DEAGTLPQ 244
Query: 189 MCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS 248
M L A LI YL LM++ N Q+ ++ D S+Y+ + +A + +L+++P G
Sbjct: 245 MDLKLAMGAASCLIRYLGLMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNLMP--GPRD 302
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL G+L+ C+TP G RLLAQW+KQPL ++ I R V VN+TE R + E
Sbjct: 303 GAKNMSLYGLLNHCKTPTGSRLLAQWLKQPLMNVAEIERRQQLVEAFVNDTELRQTMQEE 362
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ------------- 355
LR +PD+ L+ + RK A L+D R Y+ + +LP +S LES++
Sbjct: 363 HLRSIPDLYRLSKKFQRKVANLEDVVRAYQVIIRLPGFLSSLESVMDEKYKDPLDAEYTD 422
Query: 356 -----NVEASNLNTILSSLQSLKMMDRKDAV---------------MDKMKEYLESTARR 395
+ L ++ + L +D + + +DK+K +ES R
Sbjct: 423 KLRQFSAAFGGLQEMVETTVDLDALDNHEFIIKPEFDEALRTIRKRLDKLKRDMESEHAR 482
Query: 396 ----LNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLAT 448
LN +K + LEN G+ +R+T + +I + Y + T + GV F L
Sbjct: 483 VGDDLNQDTEKKLFLENHKVHGWCFRLTRNESGAIRQKKQYQEIQTQKNGVYFTTSTLQD 542
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
++ + Y Q +V EV+ +++ Y + +L+ VLA DV+V+F+ S AP
Sbjct: 543 KRREFDQMSENYNRTQSGLVNEVVSVASSYVPVVEKLAAVLAHLDVIVAFAHVSVHAPTS 602
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
Y RP M GTG+ +L + RHP +E Q +S+I ND+ K GE F ++TGPNMGGKST+
Sbjct: 603 YTRPKMHARGTGNTILKEARHPCMEQQDDISFITNDISLKRGESEFLIITGPNMGGKSTF 662
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR GV +AQIGCFVP A +++ D I RVGA+DS +G+STFM EM ETA ++K
Sbjct: 663 IRQTGVIALMAQIGCFVPAAEAELTIFDCILARVGASDSSIKGVSTFMAEMLETANILKS 722
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR 688
T+ SL+IIDELGRGTST+DGFG+A +I+ + F LFATHFHE+ LS P
Sbjct: 723 ATKESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAFALFATHFHELTALSNTYPQVE 782
Query: 689 NVQV------------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
N+ V S ++++ + LLY+V+PG +S+G+H A++ +P+ ++ A+
Sbjct: 783 NLHVVAHISEGTEETDSGVQKKREVTLLYKVEPGFSDQSFGIHVAELVRFPQKVINMAKR 842
Query: 737 LMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQC------LSLSKQKDTN 790
E E SG +N E+ + V+EG + + L + L+K++
Sbjct: 843 KADELE------DFSGKHEDNFEQASKEEVEEGSKMLKEMLAKWKEEVEGKGLTKKQQVE 896
Query: 791 RILHL 795
R+ L
Sbjct: 897 RMKEL 901
>gi|261206138|ref|XP_002627806.1| DNA mismatch repair protein msh-2 [Ajellomyces dermatitidis
SLH14081]
gi|239592865|gb|EEQ75446.1| DNA mismatch repair protein msh-2 [Ajellomyces dermatitidis
SLH14081]
Length = 966
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 267/717 (37%), Positives = 399/717 (55%), Gaps = 69/717 (9%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVT 143
T VGV D ++ + E D+D YSN E++++Q KECL+ AE + K+ +
Sbjct: 178 TRQVGVCFADASVRELGVSEFVDNDLYSNFESLVIQLGVKECLITAETQKKDVELGKLRS 237
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
ILD + ++ R +F +D+ QD++RL+R + + A LP+ L A +LI
Sbjct: 238 ILDSCGIAISQRPMADFGTKDIEQDLSRLLR----DERAAGALPQTDLKLAMGSAAALIK 293
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL M++ N Q+ ++ D S+Y+ + + + +L+++P G SL G+L+ C+
Sbjct: 294 YLGAMSDATNFGQYQLYQHDLSQYMKLDAPALRALNLMP--GPRDGAKNMSLYGLLNHCK 351
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLLAQW+KQPL + + I +R V V +TE R + E LR +PD+ LA R
Sbjct: 352 TPAGSRLLAQWLKQPLMNHEDIEKRQQLVEAFVVDTELRQTMQEDHLRSIPDLYRLAKRF 411
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQN-----VEAS------NLNTILSSLQ-- 370
R A L+D RVY+ V +LP I+ LES++ +EA NL+ S L
Sbjct: 412 QRNLANLEDVVRVYQVVIRLPGFINTLESVMDEQYQGPLEAEYTAKLRNLSDSFSKLAEM 471
Query: 371 -----------------------SLKMMDRKDAVMDKMKEYLES----TARRLNLVADKT 403
SL+++ +K +DK+K ++ + LN DK
Sbjct: 472 VETTVDLDALDNHEFIIKPEFDGSLRIIRKK---LDKLKHDMDVEHKIVGKNLNQDTDKK 528
Query: 404 IKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+ LEN G+ +R+T I ++ Y T + GV F + + ++ + Y
Sbjct: 529 LFLENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQSFRREHDQLSSNY 588
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
Q +V+EV+ ++A Y L QL+ VLA DV+VSF+ S AP YVRP + P GTG
Sbjct: 589 NRTQTGLVQEVVNVAASYCPLLEQLASVLAHLDVIVSFAHVSVHAPTAYVRPKIHPRGTG 648
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+ VL + RHP +E+Q +S+I NDV+ E SF ++TGPNMGGKSTYIR IGV +AQ
Sbjct: 649 NTVLKEARHPCMEMQDDISFITNDVFLLRNESSFLIITGPNMGGKSTYIRQIGVIALMAQ 708
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDEL
Sbjct: 709 TGCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDEL 768
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---- 695
GRGTST+DGFG+A +I+ + + + F LFATHFHE+ L P + +N+ V A
Sbjct: 769 GRGTSTYDGFGLAWAISEHIVTEIRCFALFATHFHELTALQEQYPNSVKNLHVVAFIGNG 828
Query: 696 -EQEDN---------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
EQ++N + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 829 TEQKENDSTGKSKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELE 885
>gi|239610962|gb|EEQ87949.1| DNA mismatch repair protein msh-2 [Ajellomyces dermatitidis ER-3]
gi|327351661|gb|EGE80518.1| DNA mismatch repair protein msh-2 [Ajellomyces dermatitidis ATCC
18188]
Length = 941
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 267/717 (37%), Positives = 399/717 (55%), Gaps = 69/717 (9%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVT 143
T VGV D ++ + E D+D YSN E++++Q KECL+ AE + K+ +
Sbjct: 153 TRQVGVCFADASVRELGVSEFVDNDLYSNFESLVIQLGVKECLITAETQKKDVELGKLRS 212
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
ILD + ++ R +F +D+ QD++RL+R + + A LP+ L A +LI
Sbjct: 213 ILDSCGIAISQRPMADFGTKDIEQDLSRLLR----DERAAGALPQTDLKLAMGSAAALIK 268
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL M++ N Q+ ++ D S+Y+ + + + +L+++P G SL G+L+ C+
Sbjct: 269 YLGAMSDATNFGQYQLYQHDLSQYMKLDAPALRALNLMP--GPRDGAKNMSLYGLLNHCK 326
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLLAQW+KQPL + + I +R V V +TE R + E LR +PD+ LA R
Sbjct: 327 TPAGSRLLAQWLKQPLMNHEDIEKRQQLVEAFVVDTELRQTMQEDHLRSIPDLYRLAKRF 386
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQN-----VEAS------NLNTILSSL--- 369
R A L+D RVY+ V +LP I+ LES++ +EA NL+ S L
Sbjct: 387 QRNLANLEDVVRVYQVVIRLPGFINTLESVMDEQYQGPLEAEYTAKLRNLSDSFSKLAEM 446
Query: 370 ----------------------QSLKMMDRKDAVMDKMKEYLES----TARRLNLVADKT 403
SL+++ +K +DK+K ++ + LN DK
Sbjct: 447 VETTVDLDALDNHEFIIKPEFDDSLRIIRKK---LDKLKHDMDVEHKIVGKDLNQDTDKK 503
Query: 404 IKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+ LEN G+ +R+T I ++ Y T + GV F + + ++ + Y
Sbjct: 504 LFLENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQSFRREHDQLSSNY 563
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
Q +V+EV+ ++A Y L QL+ VLA DV+VSF+ S AP YVRP + P GTG
Sbjct: 564 NRTQTGLVQEVVNVAASYCPLLEQLASVLAHLDVIVSFAHVSVHAPTAYVRPKIHPRGTG 623
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+ VL + RHP +E+Q +S+I NDV+ E SF ++TGPNMGGKSTYIR IGV +AQ
Sbjct: 624 NTVLKEARHPCMEMQDDISFITNDVFLLRNESSFLIITGPNMGGKSTYIRQIGVIALMAQ 683
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDEL
Sbjct: 684 TGCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDEL 743
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---- 695
GRGTST+DGFG+A +I+ + + + F LFATHFHE+ L P + +N+ V A
Sbjct: 744 GRGTSTYDGFGLAWAISEHIVTEIRCFALFATHFHELTALQEQYPNSVKNLHVVAFIGNG 803
Query: 696 -EQEDN---------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
EQ++N + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 804 TEQKENDSTGKSKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELE 860
>gi|392562297|gb|EIW55477.1| DNA mismatch repair protein [Trametes versicolor FP-101664 SS1]
Length = 967
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 285/875 (32%), Positives = 451/875 (51%), Gaps = 125/875 (14%)
Query: 1 HKFYLFFF---PQKS--KTTIRFFNRVEFYCVHGEDA----------------------- 32
H + FF P KS T+R F R E+Y VHG DA
Sbjct: 20 HPGFCSFFTKLPAKSPDSGTVRLFYRNEYYSVHGPDALYVATHVFRTNSVIKYLGGRAGL 79
Query: 33 ----------------ELIQRKSNVVYLVKTMGQKDKTLETVL---VNKSNLSCFSHILC 73
L ++ V V GQ K + VL + NLS +L
Sbjct: 80 PSVTLSESLAKTFLRDALTSKQLKVEIWVPEAGQGKKATKFVLDKEASPGNLSAVEDLLF 139
Query: 74 VISEDKTLETVL-----------------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLE 116
V ++ + V+ T TVGVA D T++ + + D+D +SN E
Sbjct: 140 VNTDIVSAPIVMAIKMASAPVTAGSNAAKTRTVGVAYADSSTRELGVADFVDNDIFSNTE 199
Query: 117 AIIVQKSPKECLLPAEYLNDNK------NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVN 170
+I+Q S KE ++P + K+ +LDR V +T RK ++F + + D+
Sbjct: 200 TLIIQLSVKEAIIPTGTASGTTERDFDLKKLKEVLDRCGVVITERKPSDFMTKSIADDLL 259
Query: 171 RLVRFDDSELKN----ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSK 226
RL+ + + +P++ L +A L +L++YL L+++ N +SI + D S+
Sbjct: 260 RLLNPSSTPSSSSSDATATIPQLQLPSAPAALSALVSYLSLLSDTSNHGAWSIRTHDLSQ 319
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ + ++ + +L++ G+ + +L G+L++C+T QG RLL W+KQPL + I+
Sbjct: 320 YMRLDASALRALNLTEAPGNIGSNKNTTLFGLLNKCKTAQGSRLLGSWLKQPLVNRHEIL 379
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R + V ++ +R L + L+ +PDM + R + A L+D RVY+ V +L L
Sbjct: 380 KRQSLVEAFFDDANSRRILQDDYLKLMPDMHRICKRFQKSVASLEDVVRVYQAVLKLEGL 439
Query: 347 ISILESLVQNVEASNL-------------NTILSSL-----QSLKM-------------- 374
IS +E + + E +T LS Q+L +
Sbjct: 440 ISTIEGMDTSSEDQKALLEEAYLTKFREYDTALSKYSEMVQQTLDLDELEHHNFVIKPDY 499
Query: 375 MDRKDAVMDKMKEYLES-------TARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSID 426
DR + DK+ E + + + L L DK + LENSPQ G+ +R+T ++
Sbjct: 500 DDRLRTLADKLGEVRDGLDAEHRKSGKALGLELDKKLHLENSPQYGYCFRVTKADGKALT 559
Query: 427 D---RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLN 483
D R+ L T++ G+ F L +T+Y + ++Y Q +V+EV+ I++ YT L
Sbjct: 560 DDKRRWQELGTLKSGIFFTTSTLKELSTEYTELTQQYSRTQSGLVKEVVNIASTYTPILE 619
Query: 484 QLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPN 543
++V+A DV++S + + AP+ YV+P + G+G+LVL + RHP +E+Q +S+IPN
Sbjct: 620 AWNNVIAYLDVVISLAHVAVNAPEAYVKPEILEKGSGNLVLKEARHPCLEVQDDISFIPN 679
Query: 544 DVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVG 603
DV G+ F ++TGPNMGGKSTYIR +GV +AQ G FVPC A + + D I RVG
Sbjct: 680 DVEMIKGDSEFQIITGPNMGGKSTYIRQVGVIALMAQTGSFVPCSEARVPIFDSILCRVG 739
Query: 604 AADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASH 663
A DSQ +GISTFM EM ETAT+++ +++SL+IIDELGRGTST+DGFG+A +I+ +AS
Sbjct: 740 AGDSQLKGISTFMAEMLETATILRSASKDSLIIIDELGRGTSTYDGFGLAWAISEHIASQ 799
Query: 664 RQPFTLFATHFHEIALLSRVIPTFRNVQVSA------LEQED-NLVLLYQVKPGSCVKSY 716
F +FATHFHE+ L + I +N+ V A E D ++ LLY+V+PG C +S+
Sbjct: 800 IHAFCMFATHFHELTALDQEIKHVKNLHVVAHVSDADAEGRDRDITLLYKVEPGVCDQSF 859
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE-YSLDTKTP 750
G+H A++A +PE +++ AR E E ++ D P
Sbjct: 860 GIHVAELANFPESVVKLARRKADELEDFNTDKGEP 894
>gi|367047841|ref|XP_003654300.1| hypothetical protein THITE_2117183 [Thielavia terrestris NRRL 8126]
gi|347001563|gb|AEO67964.1| hypothetical protein THITE_2117183 [Thielavia terrestris NRRL 8126]
Length = 925
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 264/744 (35%), Positives = 398/744 (53%), Gaps = 61/744 (8%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KI 141
VGV D ++ + E D+D YSN EA+++Q KECL+ E + +++ K+
Sbjct: 148 ARAVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVKECLVQVEKADRDRDPELAKL 207
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
I+D + ++ R +F +D+ QD+ RL++ + ++A LLP+ L A +L
Sbjct: 208 RQIIDSCGIAISERPVADFGTKDIEQDLARLLK----DERSATLLPQTDLKLAMGSASAL 263
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
I YL ++++ N Q+ ++ D ++++ + +A + +L+++P G SL G+L+
Sbjct: 264 IKYLGVLHDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMP--GVRDGAKTMSLFGLLNH 321
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
C+TP G RLLAQW+KQPL D D I +R V VN+TE R + E LR +PD+ LA
Sbjct: 322 CKTPVGSRLLAQWLKQPLMDKDEIEKRQQLVEAFVNDTELRQTMQEEHLRSIPDLYRLAK 381
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-----------EASNLNTILSSLQ 370
R R KA L+D R Y+ V +LP + LE ++ + L+ L+ LQ
Sbjct: 382 RFQRGKANLEDVVRAYQVVIRLPAFLGTLEGVMDEAYRDALDEAYTNKLRELSDSLAKLQ 441
Query: 371 -------------------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTI 404
SL+++ RK D + M A L DK I
Sbjct: 442 EMVETTVDLDALDNHEFIIKPEFDDSLRIIRRKLDKLRSDMDREFADAAYDLGQERDKKI 501
Query: 405 KLENSP-QGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
LEN G+ R+T I + RY T + GV F L ++ + + Y
Sbjct: 502 FLENHKVHGWCMRLTRTEAGCIRNKSRYLECSTQKNGVYFTTKTLQGYRREFDQLSQNYN 561
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q +V EV+ ++A Y+ L +L+ VLA DV+V+F+ S AP YVRP + P G G
Sbjct: 562 RTQSGLVNEVVSVAASYSPVLERLAGVLAHLDVIVAFAHCSVHAPISYVRPKIHPRGEGQ 621
Query: 522 LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 581
+L + RHP +E+Q V +I NDV + SF ++TGPNMGGKSTYIR IGV +AQI
Sbjct: 622 TILREARHPCMEMQDDVQFITNDVELTRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQI 681
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELG
Sbjct: 682 GCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELG 741
Query: 642 RGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA------- 694
RGTST+DGFG+A +I+ + F LFATHFHE+ L+ P RN+ V+A
Sbjct: 742 RGTSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTALADQYPQVRNLHVTAHIGGADS 801
Query: 695 -LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+ + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E + GD
Sbjct: 802 KSKARREVTLLYKVEPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTSSNKHDGD 861
Query: 754 ETNNREEEYFKTVQEGEYQMFDFL 777
+ + + V+EG + D L
Sbjct: 862 AAADYSK---RDVEEGSALLKDLL 882
>gi|145341286|ref|XP_001415744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575967|gb|ABO94036.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 936
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 278/834 (33%), Positives = 435/834 (52%), Gaps = 102/834 (12%)
Query: 2 KFYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRK-SNVVYLVKTMGQKDKTLETV 58
KF F+ P ++ +RFF+R + HG+DA I R ++KTMG D L V
Sbjct: 25 KFVRFYRGLPSETARVVRFFDRKDCISAHGDDAMYIARAFYKTTSVIKTMGSGDDALPGV 84
Query: 59 LVNKSNL-SCFSHIL---------------------CVIS---------EDKTLET---- 83
+N+S S +L CV S ED+ +
Sbjct: 85 ALNRSMFESALRELLLDGDGARVEFYEESKPSGTWTCVKSASPGKLQAFEDELFRSNEMS 144
Query: 84 ---------VLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
V VGVA + T++ DD+ Y LE+++ Q KEC++P E
Sbjct: 145 DASVVCAVRVANGNVGVAYANTTTRELGACAFVDDEQYCTLESVLCQIGVKECVVPKEGT 204
Query: 135 NDNKNK-IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
+ + + ++ R T R+ +F +DL D+ RLVR ++ R + + +
Sbjct: 205 ETPEGRRLRDVVSRCGALATERQARDFDAQDLENDLGRLVR---GNVEAHRAVIDQ--SH 259
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A CL +++ + E++ + N + ++ D +Y+ + ++ + +L+VLP++ + +
Sbjct: 260 AAACLAAVLRFSEMLADSANHGRCTLSMYDTGRYMRLDASALRALNVLPER--SDGPSSF 317
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SL G+L++CRTP G RLL++W+KQPL D++ I RH VN V N E R L LR L
Sbjct: 318 SLYGLLNKCRTPMGRRLLSRWLKQPLVDVNEIATRHDVVNEFVTNAEVRDALRGAHLRAL 377
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQNVEASNLNTI- 365
PD++ + ++ R+KA L D R+Y+ + LP + LE ++ A L +
Sbjct: 378 PDIERITRKLERRKASLMDLCRLYQASAALPHMAEALERCEGRHGDYIRKKYAEELKKLS 437
Query: 366 ----LSSLQSL-------------------------KMMDRKDAVMDKMKEYLESTARRL 396
L ++L ++ +KD + ++++ + L
Sbjct: 438 APSHLGRFEALLEAAVDLSKIPDEYVICASYDAELGELQKQKDTLEKQIRDAFADASDDL 497
Query: 397 NLVADKTIKLE-NSPQGFAYRITMKLNNSIDDR----YTILDTVRGGVRFQDDRLATANT 451
+ DK +KLE N+ G+ R+T K S+ + Y IL+ + G +F + ++ +
Sbjct: 498 GMERDKQLKLEHNNMHGWFMRLTKKDETSVRKKLSVSYQILEAKKDGTKFTNKKIRGLSE 557
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
Q ++ R Y+ Q+ +V+ V+ ++A +++ +S + A+ DVL SF+ + AP P+VR
Sbjct: 558 QRVSLDRSYDAKQRHLVDRVVDVAATFSEIFLSVSAMTAEIDVLASFAEVAVSAPVPFVR 617
Query: 512 PCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
P M + ++ L RHP VE Q V +I N K GE F ++TGPNMGGKST+IR
Sbjct: 618 PIMHEKTSDTIHLENSRHPNVEAQDNVRFIANTCSMKKGESWFQIITGPNMGGKSTFIRQ 677
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
+GV V LAQ+G FVPCD A I+V D IF RVGA D Q RGISTFM EM ETA ++K T
Sbjct: 678 VGVCVLLAQVGSFVPCDDAVIAVRDAIFARVGAGDCQLRGISTFMAEMLETAAILKAATS 737
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT-FRNV 690
+SLVIIDELGRGTST+DGFG+A +I+ + + Q LFATHFHE+ L P+ N
Sbjct: 738 SSLVIIDELGRGTSTYDGFGLAWAISEHIVNEIQAPCLFATHFHELTALEG--PSGVSNF 795
Query: 691 QVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V AL ++ L +LYQ+KPG+C +S+G+HCA+ A +PE++L+ AR E E
Sbjct: 796 HVEALIDQESRKLTMLYQIKPGACDQSFGIHCAEFARFPEEVLKIARAKADELE 849
>gi|403413091|emb|CCL99791.1| predicted protein [Fibroporia radiculosa]
Length = 973
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 260/717 (36%), Positives = 410/717 (57%), Gaps = 61/717 (8%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK------N 139
T ++G+A D T++ + + D+D +SN+EA+I Q S KE L+P +
Sbjct: 172 TTSIGIAFADTSTREIGVADFADNDLFSNIEALI-QLSVKEALIPTGTSSGTTERDFELK 230
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSE----LKNARLLPEMCLTTAT 195
K+ +LDR V +T RK +EF+ +++ D+ RL+ + ++++PE+ L A
Sbjct: 231 KLKEVLDRCGVVITERKPSEFTAKNIKDDMVRLLNPSSIPSSSNVDTSQVIPELSLPVAP 290
Query: 196 HCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
L +L++YL L+ + N F++ + D S+++ + ++ + +L+++ G+ + +L
Sbjct: 291 SALSALVSYLSLLTDPSNHGAFTLRAHDLSQFMKLDASALRALNLIEAPGTIGSNKNTTL 350
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
G+L++C+T QG RLL W+KQPL +L I +R V ILV + AR L + L+ +PD
Sbjct: 351 FGLLNKCKTAQGSRLLGSWLKQPLVNLHEIHKRQNLVEILVEDANARRILQDDYLKMMPD 410
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES----------LVQNVEASNLNTI 365
M + R + A L+D R+Y+ V +L LI+ +E L++ + L
Sbjct: 411 MHRICKRFQKSVASLEDVVRIYQAVLKLEGLIATVEGIETVHEGYKELIEETYLTKLQES 470
Query: 366 LSSL--------QSLKM--MDRKDAVM------------DKMKEYLES-------TARRL 396
SSL Q+L + ++R + V+ DK+K+ + A L
Sbjct: 471 NSSLSKYAEMVEQTLDLDELERHNFVIKPDYDARLQTLADKLKDLRDGLDQEHRDVANDL 530
Query: 397 NLVADKTIKLENSPQ-GFAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLATANTQ 452
++ DK + LENSP G+ +R+T + I +YT L T++ GV F L T
Sbjct: 531 DIEIDKKLHLENSPTYGYCFRVTKNDSKVIAKQKKKYTELCTLKNGVFFTTRTLKELATD 590
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
YQ Y Q +V+EV+ I++ YT L + VLA DV+VSFS + AP+ YV+P
Sbjct: 591 YQETTEMYAKTQSGLVKEVVNIASTYTPVLESWNTVLAHLDVIVSFSHVAVNAPESYVKP 650
Query: 513 CMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSI 572
+ G+GSL+L RHP +E+Q +S+IPND+ E F ++TGPNMGGKSTYIR
Sbjct: 651 QVLEQGSGSLILKDARHPCLEVQDDMSFIPNDIQMIKDESEFQIITGPNMGGKSTYIRQT 710
Query: 573 GVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
GV +AQ G FVPC A++ V D I RVGA DSQ +GISTFM EM ETAT+++ +++
Sbjct: 711 GVIALMAQTGSFVPCSEASLPVFDSILCRVGAGDSQLKGISTFMAEMLETATILRSASKD 770
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV 692
SL+IIDELGRGTST+DGFG+A +I+ +AS + F LFATHFHE+ L + I +N+ V
Sbjct: 771 SLIIIDELGRGTSTYDGFGLAWAISEHIASKIRAFCLFATHFHELTALDQEITHVKNLHV 830
Query: 693 SA-LEQED------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
A + + D ++ LLY+V+PG C +S+G+H A++A +PE++++ A+ E E
Sbjct: 831 VAHVSKSDENTRDRDITLLYKVEPGVCDQSFGIHVAELANFPENVVKLAKRKADELE 887
>gi|154309887|ref|XP_001554276.1| hypothetical protein BC1G_06864 [Botryotinia fuckeliana B05.10]
Length = 833
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 262/743 (35%), Positives = 408/743 (54%), Gaps = 61/743 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
+GV D ++ + E D+D YSN E++++Q KECL+ + + K+ I++
Sbjct: 59 IGVCFADASVRELGVSEFLDNDLYSNFESLLIQLGVKECLIQVDRTTKDVELQKLKQIIE 118
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
T R F +D+ QD+ RL++ + K+ ++P+ L A +LINYL
Sbjct: 119 NCGCAWTERAGGTFGTKDIEQDLARLLK----DEKSTGVIPQTDLKLAMGSAAALINYLG 174
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
++++ N Q+ ++ D S+++ + ++ + +L+++P G SL G+L+ C+TP
Sbjct: 175 VLHDNSNFGQYQLYQHDLSQFMKLDASALKALNLMP--GPRDGSKTMSLYGLLNHCKTPV 232
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL L+ I +R V V + E + + E +R +PD+ LA R +K
Sbjct: 233 GSRLLAQWLKQPLMSLEEIEKRQQLVEAFVEDQELKQTIQETHMRSIPDLYRLAKRFQKK 292
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ------------------NVEASNLNTILSS 368
A L+D R Y+ V ++P LI LE ++ NV NL ++ +
Sbjct: 293 LANLEDVVRAYQVVIRIPDLIKTLEDVMDEKYRDALDEAYTDKLRGCNVSLGNLAEMVET 352
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLES----TARRLNLVADKTIKLENS 409
L+ MD + + +DK+K ++ A+ L +K I LEN+
Sbjct: 353 TVDLEAMDNHEYIIKPEFDDSLNIIRRKLDKLKYEMDQEFRIVAKDLGQEIEKKIFLENN 412
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ R+T + I ++ Y T + GV F +L + ++ + Y Q S
Sbjct: 413 KVHGWCMRLTRTEASCIRNKSKYQECQTQKNGVYFTTSKLLSIRREFDQLSENYNRTQSS 472
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ +A Y + QL+ VLA DV+VS + S AP YVRP M P GTGS +L +
Sbjct: 473 LVNEVVATAASYCPVIEQLASVLAHLDVIVSLAHTSAHAPTSYVRPKMHPRGTGSTILKE 532
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q V +I NDV E SF ++TGPNMGGKSTYIR IGV +AQIGCFVP
Sbjct: 533 ARHPCMEMQDDVQFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVP 592
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 593 CSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 652
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV--------SALEQE 698
+DGFG+A +I+ + F++FATHFHE+ L+ P +N+ V S+ E++
Sbjct: 653 YDGFGLAWAISEYIVREIGAFSMFATHFHELTALADTFPQVKNLHVVAHIDTEPSSQERK 712
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-YSLDTKTPSGDETNN 757
+ LLY+V+ G C +S+G+H A++ +PE ++ AR +E E + K +GD ++
Sbjct: 713 REVTLLYKVEEGICDQSFGIHVAELVKFPEKVIGMARRKAEELEDFGTSVKADNGDPSS- 771
Query: 758 REEEYFKT-VQEGEYQMFDFLQQ 779
+EY K V+EG + D L++
Sbjct: 772 --QEYAKEDVEEGSRLLKDILKK 792
>gi|393235788|gb|EJD43340.1| DNA mismatch repair protein [Auricularia delicata TFB-10046 SS5]
Length = 967
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 286/848 (33%), Positives = 440/848 (51%), Gaps = 136/848 (16%)
Query: 11 KSKTTIRFFNRVEFYCVHGEDAELIQ-----------------RKSNVVYL--------- 44
+S TIR F+R E+Y VHG+DA+ + RK N V L
Sbjct: 39 QSDDTIRLFDRGEYYTVHGKDADFVALHVFRTTQVVKVLGKGMRKLNSVVLRPVLAKSFL 98
Query: 45 ----------VKTMGQKDKTLETVLVNK----SNLSCFSHILCVISEDKTLETVL----- 85
++ G +DK + + NL +L V + + V+
Sbjct: 99 REALTARQMRIEIWGIEDKKANKWALQRQASPGNLQDVEDLLFVNEDMSSAPIVMAVKLS 158
Query: 86 ----TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA-----EYLND 136
T VGVA D ++ + E D+D +SN E++++Q KECLL + E +D
Sbjct: 159 SKGETKNVGVAFADASNREIGVAEFVDNDLFSNTESLLIQLGVKECLLQSDEKKKEAADD 218
Query: 137 NKNK------IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
K K + IL+R + T RK +F+ ++ D+ RL++ D + LPE+
Sbjct: 219 EKKKDMDLAKLAQILERCNIVHTARKAADFTGRNIEDDLRRLLKEDTT----VAALPELD 274
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP-------- 242
L A +L YL L++++ N ++++ D ++Y+ + ++ + +L + P
Sbjct: 275 LKLAMQATAALTAYLALVSDDTNHGRYALRRHDLAQYMRLDASGVRALGLFPAPQDQTLG 334
Query: 243 -QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEA 301
Q+G + +L G+L++ RT QG RLLA+W+KQPL +L I +R V + + +A
Sbjct: 335 GQRGKNT-----TLFGLLNKTRTGQGARLLARWLKQPLVNLHEIKKRQDLVEVFAEDGDA 389
Query: 302 RMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-------- 353
R + L+ +PD + R +K AGL+D RVY+ V +LP LI LE +
Sbjct: 390 RQTIQMEFLKAMPDFHRIGKRFQKKVAGLQDVVRVYQAVQKLPPLIDNLEEMQGKLTQHQ 449
Query: 354 --------VQNVEAS---NLNTILSSLQS-------LKMMDRKD---------------- 379
VQ ++AS N +T+L L+ +DR
Sbjct: 450 SDLVQSFFVQPLKASLHTNNHTLLEKYGEMVETTIDLEELDRSPNNYIIRSEHDEQLAKL 509
Query: 380 -----AVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSIDDR--YTI 431
V D + + R L L DK + LE N G+ +R++ I+ + Y
Sbjct: 510 ATTIRRVRDGLDKEHAKAGRDLGLELDKKLHLEKNDKYGYVFRVSKLDTKHIEGKRAYIQ 569
Query: 432 LDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQ 491
L T + G F+ LA T++ Y+ Q +V+E++ ++A YT+ L L DV+A
Sbjct: 570 LATQKTGTFFRTQALADLATEFAEAAESYKAKQAQLVKEIVEVAASYTEVLLALDDVIAT 629
Query: 492 FDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGE 551
DV++SF+ + AP YV+P + MGTG++ L + RHP +E+Q +S+IPNDV G
Sbjct: 630 MDVILSFAHVAMTAPTAYVKPTVLEMGTGNVQLKEARHPCMEVQDEISFIPNDVEMIRGV 689
Query: 552 VSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRG 611
F ++TGPNMGGKSTYIR IGV +AQ+G FVPC+SAT+ + D I RVGA DSQ +G
Sbjct: 690 SEFQIITGPNMGGKSTYIRQIGVIALMAQVGSFVPCESATVPIFDSILARVGAGDSQLKG 749
Query: 612 ISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFA 671
+STFM EM ETAT++K T+NSLVIIDELGRGTST+DGFG+A +I+ +AS + F LFA
Sbjct: 750 VSTFMAEMLETATILKSATQNSLVIIDELGRGTSTYDGFGLAWAISEHIASQIRAFCLFA 809
Query: 672 THFHEIALLSRVIPTFRNVQVSA--------LEQEDNLVLLYQVKPGSCVKSYGVHCAKM 723
THFHE+ L +P +N+ V A + + ++ LLY+V+PG C +S+G+H A++
Sbjct: 810 THFHELTALDHQLPHVKNLHVVAHVAPRGTESKHDRDITLLYKVQPGICDQSFGIHVAEL 869
Query: 724 AGYPEDML 731
A +PE +L
Sbjct: 870 ANFPESVL 877
>gi|119491961|ref|XP_001263475.1| DNA mismatch repair protein Msh2, putative [Neosartorya fischeri
NRRL 181]
gi|119411635|gb|EAW21578.1| DNA mismatch repair protein Msh2, putative [Neosartorya fischeri
NRRL 181]
Length = 940
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 265/713 (37%), Positives = 393/713 (55%), Gaps = 68/713 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL--LPAEYLNDNKNKIVTILD 146
VGV D ++ + E D+D YSN E++I+Q KECL + A + KI I D
Sbjct: 157 VGVCFADASVRELGVSEFLDNDVYSNFESLIIQLGVKECLVQMDANRKDVELGKIRAIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R +F +D+ QD+ RL+R + ++A LP+ L A +LI YL
Sbjct: 217 NCGIAISERPVADFGVKDIEQDLTRLLR----DERSAATLPQTELKLAMGSASALIKYLG 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+M++ N Q+ ++ D S+++ + ++ + +L+++P G SL G+L+ C+TP
Sbjct: 273 VMSDPSNFGQYQLYQHDLSQFMKLDASALRALNLMP--GPRDGSRTMSLFGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL DL I +R V V NTE R L E LR +PD+ LA R RK
Sbjct: 331 GSRLLAQWLKQPLMDLAEIEKRQQLVEAFVENTELRQTLQEEHLRSIPDLYRLAKRFQRK 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISILE------------------------SLVQNVEASNL 362
+A L+D RVY+ +LP +S LE SL + E
Sbjct: 391 QANLEDVVRVYQVAIRLPGFVSSLENVMDEQYQTPLETEYTSKLRSHSDSLAKLEEMVET 450
Query: 363 NTILSSLQ------------SLKMMDRKDAVMDKMKEYLESTARR----LNLVADKTIKL 406
L++L+ SL+++ +K +DK++ ++ RR L+ DK + L
Sbjct: 451 TVDLAALENHEFIIKPEFDDSLRIIRKK---LDKLRHDMDVEHRRVAKDLDQEVDKKLFL 507
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ +R+T I ++ Y T + GV F + ++ + Y
Sbjct: 508 ENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSSNYNRT 567
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+ ++A Y L QL+ VLA DV+VSF+ A+ AP YVRP M P GTG+ V
Sbjct: 568 QTGLVNEVVNVAASYCPVLEQLAGVLAHLDVIVSFAHAAVHAPTAYVRPKMHPRGTGNTV 627
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GC
Sbjct: 628 LKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGC 687
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGRG
Sbjct: 688 FVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRG 747
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL------- 695
TST+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 748 TSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKSVKNLHVVAFIGDGTND 807
Query: 696 ------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 808 NAGEEKSKKQQVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELE 860
>gi|321250171|ref|XP_003191714.1| DNA mismatch repair protein MSH2 [Cryptococcus gattii WM276]
gi|317458181|gb|ADV19927.1| DNA mismatch repair protein MSH2, putative [Cryptococcus gattii
WM276]
Length = 964
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 263/717 (36%), Positives = 407/717 (56%), Gaps = 57/717 (7%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
NTVGV VD+ K + E DD+ +SN E++++Q KEC+L A+ K+ +++
Sbjct: 177 NTVGVGFVDVQEKVVGVSEFVDDENFSNTESLLIQLGVKECILQADEKRPELAKLRMLVE 236
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T RK +EF +++ QD+NRL+ D+S A LPE L A L +LINYL
Sbjct: 237 WCGVIVTDRKSSEFQTKNVEQDLNRLL--DESHAGAA--LPEFDLKIAMSALSALINYLS 292
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
L+++ Q +H D S+Y+ + ++ + +L+++P S+ G+L+RC+T Q
Sbjct: 293 LLSDLSLHGQLRLHRHDLSQYMKLDASALKALNLMPNPQELGGNRNMSIYGLLNRCKTSQ 352
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL +W+KQPL + I++R V + V ++ R ++ L+ +PD ++ + ++
Sbjct: 353 GTRLLGRWLKQPLVNRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKR 412
Query: 327 KAGLKDCYRVYEGVSQLPKLISILE--------------------------------SLV 354
AGL+D RVY+ V LP L ILE S+V
Sbjct: 413 VAGLEDVVRVYQAVQLLPGLQEILENANTPEPGARDLIEEIWLKPLREHIEKLGNYSSMV 472
Query: 355 QNV----EASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARR----LNLVADKTIKL 406
++ E +N N ++ + +D ++D +++ L+ RR L L DK + L
Sbjct: 473 EDTIDLDELANHNYVILPTIDEDLQRHRDELLD-VRDQLDDEHRRVGNDLGLDIDKKLHL 531
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN +++RIT + I ++ Y L T + G F L + +Y +Q YE
Sbjct: 532 ENHQVYKYSFRITKAEASLIRNKKEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQ 591
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q+ +V+EV+ I+A YT L L +++A DV+VS + S+ AP PYV+P + GTG +V
Sbjct: 592 QRHLVKEVVSIAASYTPVLEMLDNMIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVV 651
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
+ RHP +E+Q + +IPND + G+ F ++TGPNMGGKSTYIR IGV +AQ+GC
Sbjct: 652 VLGARHPCLEVQDDIVFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGC 711
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP A + + D I RVGA D+Q +G+STFM EM ETAT+++ T++SL+IIDELGRG
Sbjct: 712 FVPATEAQLPIFDCILARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRG 771
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ------ 697
TST+DGFG+A +I+ +A F LFATHFHE+ LS P +N+ V AL Q
Sbjct: 772 TSTYDGFGLAWAISEYIAEKIHCFCLFATHFHELTTLSEKNPHVKNLHVEALVQDKDGEG 831
Query: 698 ---EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
E ++ LLYQVK G C +S+G+H A++A +PE +++ A+ +E E D +TP+
Sbjct: 832 GGKERDITLLYQVKEGICDQSFGIHVAELANFPESVVKLAKRKAEELEDFGDNQTPA 888
>gi|169767466|ref|XP_001818204.1| DNA mismatch repair protein msh-2 [Aspergillus oryzae RIB40]
gi|238484337|ref|XP_002373407.1| DNA mismatch repair protein Msh2, putative [Aspergillus flavus
NRRL3357]
gi|83766059|dbj|BAE56202.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701457|gb|EED57795.1| DNA mismatch repair protein Msh2, putative [Aspergillus flavus
NRRL3357]
Length = 940
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 264/714 (36%), Positives = 395/714 (55%), Gaps = 68/714 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-----NKIV 142
+VGV D ++ + E D+D YSN E++I+Q KECL+ ++ NK KI
Sbjct: 156 SVGVCFADASVRELGVSEFLDNDIYSNFESLIIQLGVKECLVQ---MDANKKDVELGKIR 212
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
I D + ++ R ++ +D+ QD+ RL+R + ++A LP+ L A +LI
Sbjct: 213 AIADSCGIAISERPVADYGVKDIEQDLTRLLR----DERSAGTLPQTELKLAMGSASALI 268
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
YL +M + N Q+ ++ D S+++ + S+ + +L+++P G SL G+L+ C
Sbjct: 269 KYLGVMTDPTNFGQYQLYQHDLSQFMKLDSSALRALNLMP--GPRDGSKSMSLFGLLNHC 326
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
+TP G RLLAQW+KQPL DL I +R V V NTE R + E LR +PD+ LA R
Sbjct: 327 KTPVGSRLLAQWLKQPLMDLAEIEKRQQLVEAFVVNTELRQTMQEEHLRSIPDLYRLAKR 386
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILESL--------VQNVEASNLNTILSSLQSLKM 374
RK+A L+D RVY+ +LP ++ LE++ ++ SNL + SL L+
Sbjct: 387 FQRKQANLEDVVRVYQVAIRLPGFVNSLENVMDEEYQTPLETEYTSNLRSHSDSLAKLEE 446
Query: 375 MDRKDAVMDKMK--------EYLES---------------------TARRLNLVADKTIK 405
M +D ++ E+ ES AR L+ +K +
Sbjct: 447 MVETTVDLDALENHEFIIKPEFDESLRIIRKKLDKLRHDMGVEHRRVARDLDQDIEKKLF 506
Query: 406 LENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
LEN G+ +R+T + I ++ Y T + GV F + T ++ + Y
Sbjct: 507 LENHRVHGWCFRLTRNESGCIRNKREYQECSTQKNGVYFTTSTMQTLRREHDQLSSNYNR 566
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q +V EV+ ++A Y L +L+ V+A DV+VSF+ AS AP PY RP M P GTG+
Sbjct: 567 TQTGLVNEVVNVAASYCPVLERLAGVIAHLDVIVSFAHASVHAPTPYARPKMHPRGTGNT 626
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
VL + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ G
Sbjct: 627 VLKEARHPCMEMQDDISFITNDVALVRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTG 686
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGR
Sbjct: 687 CFVPCTEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGR 746
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL------ 695
GTST+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 747 GTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKSVKNLHVVAFIGDGTD 806
Query: 696 -------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ + + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 807 DDSEDKKSKRNQVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELE 860
>gi|145252302|ref|XP_001397664.1| DNA mismatch repair protein msh-2 [Aspergillus niger CBS 513.88]
gi|134083212|emb|CAK42850.1| unnamed protein product [Aspergillus niger]
Length = 945
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 264/714 (36%), Positives = 398/714 (55%), Gaps = 68/714 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL--LPAEYLNDNKNKIVTIL 145
+VGV D ++ + E D+D YSNLE++++Q KECL + A + K+ I+
Sbjct: 162 SVGVCFADASVRELGVSEFLDNDVYSNLESLVIQLGVKECLVQMDAGRKDVELGKVRNIM 221
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
D + ++ R +F D+ QD+ RL+R + ++A LP+ L A +LI YL
Sbjct: 222 DSCGIAVSERHSGDFGVRDIEQDLTRLLR----DERSAGTLPQTELKLAMGSAAALIKYL 277
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+M + N Q+ ++ D S+++ + S+ + +L+++P G SL G+L+ C+TP
Sbjct: 278 GVMTDPSNFGQYRLYQHDLSQFMKLDSSALRALNLMP--GPRDGSKSMSLFGLLNHCKTP 335
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLLAQW+KQPL D I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 336 VGSRLLAQWLKQPLMDKAEIEKRQQLVESFVMDTELRQTMQEEHLRSIPDLYRLAKRFQR 395
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQN-----VEAS----------NLNTI----- 365
K+A L+D RVY+ +LP ++ LE+++ +EA NL +
Sbjct: 396 KQATLEDVVRVYQVAIRLPGFVASLENVMDEQYQTPLEAEYTSKLRSHSDNLAKLEEMVE 455
Query: 366 ----LSSLQ------------SLKMMDRKDAVMDKMKEYLESTARR----LNLVADKTIK 405
L +L+ SL+++ +K +DK++ ++S RR L+ DK +
Sbjct: 456 TTVDLDALENHEFIIKPEFDESLRIIRKK---LDKLRHDMDSEHRRVGGDLDQEVDKKLF 512
Query: 406 LENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
LEN G+ +R+T I ++ Y T + GV F + ++ + Y
Sbjct: 513 LENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSSNYNR 572
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q +V EV+G++A Y L QL+ VLA DV+VSF+ + AP PYVRP + P GTG+
Sbjct: 573 TQTGLVSEVVGVAASYCPVLEQLAGVLAHLDVIVSFAHCAVHAPTPYVRPKIHPRGTGNT 632
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
VL + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ G
Sbjct: 633 VLKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTG 692
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGR
Sbjct: 693 CFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGR 752
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL------ 695
GTST+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 753 GTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKSAKNLHVVAFIGDGTG 812
Query: 696 -------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ D + LLY+V+PG C +S+G+H A++ +PE ++ AR E E
Sbjct: 813 NEEDSKDSKRDQVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKADELE 866
>gi|70999834|ref|XP_754634.1| DNA mismatch repair protein Msh2 [Aspergillus fumigatus Af293]
gi|66852271|gb|EAL92596.1| DNA mismatch repair protein Msh2, putative [Aspergillus fumigatus
Af293]
gi|159127648|gb|EDP52763.1| DNA mismatch repair protein Msh2, putative [Aspergillus fumigatus
A1163]
Length = 940
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 264/716 (36%), Positives = 394/716 (55%), Gaps = 74/716 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-----NKIVT 143
VGV D ++ + E D+D YSN E++I+Q KECL+ ++ N+ KI
Sbjct: 157 VGVCFADASVRELGVSEFLDNDVYSNFESLIIQLGVKECLVQ---MDTNRKDVELGKIRA 213
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I D + ++ R +F +D+ QD+ RL+R + ++A LP+ L A +LI
Sbjct: 214 IADNCGIAISERPVADFGVKDIEQDLTRLLR----DERSAATLPQTELKLAMGSASALIK 269
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL +M + N Q+ ++ D S+++ + ++ + +L+++P G SL G+L+ C+
Sbjct: 270 YLGVMADPSNFGQYQLYQHDLSQFMKLDASALRALNLMP--GPRDGSRTMSLFGLLNHCK 327
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLLAQW+KQPL DL I +R V V NTE R L E LR +PD+ LA R
Sbjct: 328 TPVGSRLLAQWLKQPLMDLAEIEKRQQLVEAFVENTELRQTLQEEHLRSIPDLYRLAKRF 387
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILE------------------------SLVQNVEA 359
RK+A L+D RVY+ +LP +S LE SL + E
Sbjct: 388 QRKQANLEDVVRVYQVAIRLPGFVSSLENVMDEQYQTPLETEYTSKLRSHSDSLAKLEEM 447
Query: 360 SNLNTILSSLQ------------SLKMMDRKDAVMDKMKEYLESTARR----LNLVADKT 403
L++L+ SL+++ +K +DK++ ++ RR L+ DK
Sbjct: 448 VETTVDLAALENHEFIIKPEFDDSLRIIRKK---LDKLRHDMDVEHRRVAKDLDQEVDKK 504
Query: 404 IKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+ LEN G+ +R+T I ++ Y T + GV F + ++ + Y
Sbjct: 505 LFLENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSSNY 564
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
Q +V EV+ ++A Y L QL+ VLA DV+VSF+ A+ AP YVRP M P GTG
Sbjct: 565 NRTQSGLVNEVVNVAASYCPVLEQLAGVLAHLDVIVSFAHAAVHAPTAYVRPKMHPRGTG 624
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+ +L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ
Sbjct: 625 NTILKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQ 684
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDEL
Sbjct: 685 TGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDEL 744
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL---- 695
GRGTST+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 745 GRGTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKSVKNLHVVAFIGDG 804
Query: 696 ---------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 805 TNDNAGEERPKKQQVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELE 860
>gi|154278353|ref|XP_001539990.1| DNA mismatch repair protein msh-2 [Ajellomyces capsulatus NAm1]
gi|150413575|gb|EDN08958.1| DNA mismatch repair protein msh-2 [Ajellomyces capsulatus NAm1]
Length = 1015
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 260/711 (36%), Positives = 398/711 (55%), Gaps = 63/711 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ +GE D+D YSN E++++Q KECL+ E + K+ +ILD
Sbjct: 230 VGVCFADASVRELGVGEFVDNDLYSNFESLVIQLGVKECLIMMESQKKDVELGKLRSILD 289
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R +F +D+ QD++RL+R + + A +LP+ L A +LI YL
Sbjct: 290 NCGIAISQRPMADFGTKDIEQDLSRLLR----DERVAGILPQTDLKLAMGAAAALIKYLG 345
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D S+Y+ + +A + +L+++P G SL G+L+ C+TP
Sbjct: 346 AMSDATNFGQYRLYQHDLSQYMKLDAAALRALNLMP--GPRDGAKNMSLYGLLNHCKTPV 403
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + + I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 404 GSRLLAQWLKQPLMNHEDIEKRQQLVEAFVVDTELRQTMQEDHLRSIPDLYRLAKRFQRD 463
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESL----------------VQNVEA--SNLNTILSS 368
A L+D RVY+ V +LP I+ LE++ ++N+ S L ++ +
Sbjct: 464 MANLEDVVRVYQVVIRLPGFINTLENVMDEQYQGPLETEYTTKLRNISDNFSKLAEMVET 523
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLES----TARRLNLVADKTIKLENS 409
L +D + + +D++K +++ R LN DK + LEN
Sbjct: 524 TVDLDALDNHEFIIKPEFDDSLRIIKKKLDRLKHDMDTEHKIVGRDLNQDTDKKLFLENH 583
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T + I ++ Y T + GV F + + ++ + Y Q
Sbjct: 584 RVHGWCFRLTRNEASCIRNKREYQECSTQKNGVYFTTSTMLSLRREHDQLSSNYNRTQTG 643
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V+EV+ ++A Y L QL+ VLA DV+VSF+ S AP YVRP + P GTG+ VL +
Sbjct: 644 LVQEVVNVAASYCPLLEQLASVLAHLDVIVSFAHVSVHAPTAYVRPKIHPRGTGNTVLKE 703
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 704 ARHPCMEMQDDISFITNDVSLLRNESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 763
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 764 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 823
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL---------- 695
+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 824 YDGFGLAWAISEHIVTEIRCFALFATHFHELTALQDRYPNSVKNLHVVAFINDGTEGKQN 883
Query: 696 ----EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 884 SSTDKKKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELE 934
>gi|388582942|gb|EIM23245.1| DNA mismatch repair protein [Wallemia sebi CBS 633.66]
Length = 906
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/704 (36%), Positives = 401/704 (56%), Gaps = 55/704 (7%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA--EYLNDNKNKIVTILD 146
VG A D ++ + E D+D +SN+E++I+Q KECL+P+ + + + K+ T+++
Sbjct: 140 VGSAYCDASCRELGLSEFVDNDLFSNVESLIIQLGVKECLMPSNDKGTDHDLTKLKTLIE 199
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + +T K ++F+ +D+ QD++RL++ D +K + E + A LINYL
Sbjct: 200 RCGIVVTEVKPSDFNTKDIEQDLDRLLK--DGAIKQS---SEFNMKIAMSSASVLINYLG 254
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
LM + N +QF++ + D S Y+ + ++ + +L + P G SL G+L+ C+T Q
Sbjct: 255 LMGDAANFSQFTLKNHDLSHYMKLDASALRALSLFPSPGEVGGSKNMSLYGLLNHCKTAQ 314
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL L I R V +N E R + E + +PD+ L+ R R
Sbjct: 315 GQRLLAQWLKQPLMTLHEIHSRQNLVEWFMNEVELRGTMREQIMTKMPDLHRLSKRFQRG 374
Query: 327 KAGLKDCYRVYEGVSQLPKLISIL-----------------ESLVQNVE--ASNLNTILS 367
A L+D R Y+ +PKL+ ++ E+ ++ E + +LN ++
Sbjct: 375 VANLEDVVRTYQACLNIPKLLELIRQTQESVMDDSLKLLIEETYIKPFEEFSGSLNMLIE 434
Query: 368 SLQS---------------------LKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIK 405
++S LK RK + + D + + ++ L L K +
Sbjct: 435 MVESTIDLDELANHNYVIKPEFDDDLKAYRRKLEVIRDGLDDEHQAVGDDLGLDLGKKLH 494
Query: 406 LE-NSPQGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
+E + G+ +R+T S+ + +Y L T++ G F+ L +Y+ +Q Y+
Sbjct: 495 MERHQTYGYCFRVTKAEAKSVSNNKKYHELSTLKSGTYFRTSTLRDLGDEYKEVQTAYDK 554
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q S+V+EV+GI+A Y L L +VLA DVL+ F+ S + P+V+P + GT +
Sbjct: 555 KQSSLVKEVVGIAATYCPVLESLDNVLAHVDVLMDFAYVSDKSANPFVKPEVLEKGTSDM 614
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
L++ RHP +E+Q GV +I NDV K E F +VTGPNMGGKSTYIR IG+ +AQIG
Sbjct: 615 TLSEARHPCLEVQDGVDFIANDVTLKRDESEFLIVTGPNMGGKSTYIRQIGIIALMAQIG 674
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
C+VPC AT+ V D I +RVGA DSQ +GISTFM EM ETAT++K T +SL+IIDELGR
Sbjct: 675 CYVPCTKATVPVFDCILSRVGAGDSQIKGISTFMAEMLETATILKSATRDSLIIIDELGR 734
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA-LEQE--- 698
GTST+DGFG+A +I+ +A + F +FA+HFHE+ LS +N+ V A +EQE
Sbjct: 735 GTSTYDGFGLAWAISEYIAVELRSFCVFASHFHELTALSNQQTHVKNLHVVAHVEQENDQ 794
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ LLY+V+PG KS+G++ A+MAG+PE +++ A+ E E
Sbjct: 795 EDVSLLYKVEPGISDKSFGINVAQMAGFPESVIKLAKRKADELE 838
>gi|212528164|ref|XP_002144239.1| DNA mismatch repair protein Msh2, putative [Talaromyces marneffei
ATCC 18224]
gi|111380652|gb|ABH09703.1| MSH2-like protein [Talaromyces marneffei]
gi|210073637|gb|EEA27724.1| DNA mismatch repair protein Msh2, putative [Talaromyces marneffei
ATCC 18224]
Length = 944
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 263/739 (35%), Positives = 402/739 (54%), Gaps = 67/739 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
+GV D ++ + E D+D YSN E++++Q KEC++ + + K+ I D
Sbjct: 162 IGVCFADASVRELGVSEFLDNDVYSNFESLVIQLGVKECVIQLDSTKKDAELAKLRAIAD 221
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T R +F D+ QD+ RL+R + ++A LP+ L A +LI YL
Sbjct: 222 TCGVAITERPMADFGTRDIEQDLTRLLR----DERSAATLPQTELKLAMGAAAALIKYLG 277
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+M++ N Q+ ++ D S+Y+ + +A + +L+++P G SL G+L+ C+TP
Sbjct: 278 VMSDSTNFGQYQLYQHDLSQYMKLDAAALRALNLMP--GPRDGAKNMSLYGLLNHCKTPV 335
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL D I +RH V V +TE R + E LR +PD+ LA R R
Sbjct: 336 GSRLLAQWLKQPLMDQAEIEKRHQLVEAFVVDTELRQTMQEEHLRAIPDLYRLAKRFQRS 395
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ-----------NVEASNLNTILSSLQ----- 370
+A L+D RVY+ +LP + E+++ + NL+ L+ L+
Sbjct: 396 QANLEDVVRVYQVAIRLPGFVRSFENVMDEQYQTPLDDQYTTKLRNLSNSLAKLEEMVET 455
Query: 371 --------------------SLKMMDRKDAVMDKMKEYLESTARR----LNLVADKTIKL 406
SL+++ +K +DK++ ++ RR LN +K + +
Sbjct: 456 TVDLDALANHEFIIKPEFDDSLRVIRKK---LDKLRYDMDLEHRRVAKDLNQDMEKKLFM 512
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ +R+T I ++ Y T + GV F + ++ + Y
Sbjct: 513 ENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTRTMQELRREHDQLSSNYNRT 572
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V+EV+ ++ Y L QL+ +LA DV+VSF+ S AP Y RP M P GTG+ +
Sbjct: 573 QSGLVQEVVNVATSYCPVLEQLAGILAHLDVIVSFAHVSVHAPTAYARPKMHPRGTGNTI 632
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV GE SF ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 633 LKEARHPCMEMQDDISFITNDVSLVRGESSFLIITGPNMGGKSTYIRQIGVIALMAQIGC 692
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGRG
Sbjct: 693 FVPCTEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRG 752
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL-----EQ 697
TST+DGFG+A +I+ + + F +FATHFHE+ AL R + +N+ V A E
Sbjct: 753 TSTYDGFGLAWAISEHIVTEIGCFGMFATHFHELTALADRYPKSVKNLHVVAFISDAKEG 812
Query: 698 EDN----LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
E N + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E D T + D
Sbjct: 813 ESNKKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELE---DFTTATSD 869
Query: 754 ETNNREEEYFKTVQEGEYQ 772
T +E + + E +
Sbjct: 870 NTEKKETSALDSYSQDEVE 888
>gi|85093179|ref|XP_959643.1| hypothetical protein NCU02230 [Neurospora crassa OR74A]
gi|3914053|sp|O13396.1|MSH2_NEUCR RecName: Full=DNA mismatch repair protein msh-2
gi|2606088|gb|AAB84225.1| DNA mismatch repair protein [Neurospora crassa]
gi|28921089|gb|EAA30407.1| hypothetical protein NCU02230 [Neurospora crassa OR74A]
Length = 937
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 263/736 (35%), Positives = 395/736 (53%), Gaps = 78/736 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVT 143
TVGV D ++ + E D+D YSN EA+++Q KEC++ + K+ K+
Sbjct: 150 TVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVKECIVTQDKGEKEKDPELAKLRQ 209
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I+D V + R EF +D+ QD++RL++ + + A LLP+ L A +LI
Sbjct: 210 IIDNCGVAIAERSAGEFGTKDIEQDLSRLLK----DERAASLLPQTDLKLAMGSASALIK 265
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL ++++ N Q+ ++ D ++++ + +A + +L+++P G+ SL G+L+ C+
Sbjct: 266 YLGILHDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMP--GARDGAKNMSLYGLLNHCK 323
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLL+QW+KQPL + + I +R V N+TE R ++ E LR +PD+ L+ R
Sbjct: 324 TPVGSRLLSQWLKQPLMNAEEIEKRQQLVEAFANDTELRQSMQEEHLRSIPDLYRLSKRF 383
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-----------LSSLQ-- 370
R KA L+D R Y+ V +LP I LE ++ L+ + L LQ
Sbjct: 384 QRGKATLEDVVRAYQVVIRLPGFIGTLEGVMDEAYRDPLDEVYTNKLRELSDSLVKLQEM 443
Query: 371 -----------------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIKL 406
SL+++ +K D + M A L +K I L
Sbjct: 444 VETTVDLDALDNHEFIIKPEFDDSLRIIRKKLDRLRTDMDNEFAEAAEDLGQEREKKIFL 503
Query: 407 ENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ R+T I + RY T + GV F L ++ + + Y
Sbjct: 504 ENHKVHGWCMRLTRTEAGCIRNNSRYLECSTQKNGVYFTTKTLQALRREFDQLSQNYNRT 563
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q S+V EV+G++A Y L +L+ VLA DV+VSF+ S AP YVRP + P GTG V
Sbjct: 564 QSSLVNEVVGVAASYCPVLERLAAVLAHLDVIVSFAHCSVHAPISYVRPKIHPRGTGRTV 623
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q V++I NDV + SF ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 624 LTEARHPCMEVQDDVTFITNDVTLTREDSSFLIITGPNMGGKSTYIRQIGVIALMAQIGC 683
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC SA +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 684 FVPCSSAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRG 743
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA--------- 694
TST+DGFG+A +I+ + F LFATHFHE+ L+ P +N+ V+A
Sbjct: 744 TSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTALADQYPNVKNLHVTAHISGTDTDT 803
Query: 695 ---------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSL 745
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 804 DVITDEDEKAKKKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE--- 860
Query: 746 DTKTPSGDETNNREEE 761
D T+ EEE
Sbjct: 861 -------DFTSKHEEE 869
>gi|403260988|ref|XP_003922924.1| PREDICTED: DNA mismatch repair protein Msh2 [Saimiri boliviensis
boliviensis]
Length = 825
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 293/830 (35%), Positives = 436/830 (52%), Gaps = 135/830 (16%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQ--KDKTLE- 56
F FF P+K TT+R F+R +FY VHGEDA L R+ ++K MG +D+ E
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTVHGEDALLAAREVFKTQGVIKYMGPAGEDRDGEC 78
Query: 57 --------------------------------TVLVNKSNLSCFSHILCVISEDKTLETV 84
L + NLS F +L ++ V
Sbjct: 79 WGGTRGLWRDSIPASESGRRTASPAWGRDVGAPALASPGNLSQFEDVLFGNNDTSASIGV 138
Query: 85 LT---------NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLN 135
+ VGV VD +K + E PD+D +SNLEA+++Q PKEC+LP
Sbjct: 139 VGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPGGETA 198
Query: 136 DNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTAT 195
+ K+ I+ R + +T +KK +FS +D+ QD+NRL++ E
Sbjct: 199 GDMGKLRQIIQRGGILITEKKKADFSTKDIYQDLNRLLKGKKGE---------------- 242
Query: 196 HCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT-YDS 254
M+SAV+ + QGS T S
Sbjct: 243 ---------------------------------QMNSAVLPEME---NQGSVEDTTGSQS 266
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVER--HAAVNILVNNTEARMNLHEYALRG 312
L +L++C+TPQG RL+ QW+KQPL D + I ER H + +L + R H+ L
Sbjct: 267 LAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERIAHKDMGVLWKEKK-RKGKHQKLL-- 323
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL 372
LA+ + L D S K ++E+ + + N ++
Sbjct: 324 ------LAVFV----TPLTDLR------SDFSKFQEMIETTLDMDQVENHEFLVKPSFDP 367
Query: 373 KMMDRKDAVMD---KMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--D 426
+ + ++ + D KM+ L S AR L L K IKL++S Q G+ +R+T K + +
Sbjct: 368 NLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNN 427
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+T +D + GV+F + +L + N +Y + EYE Q +IV+E++ IS+GY + + L+
Sbjct: 428 KNFTTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLN 487
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVY 546
DVLAQ D +VSF+ S AP PYVRP + G G ++L RH VE+Q V++IPNDVY
Sbjct: 488 DVLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVY 547
Query: 547 FKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAAD 606
F+ + F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+SA +S+VD I RVGA D
Sbjct: 548 FEKNKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGD 607
Query: 607 SQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQP 666
SQ +G+STFM EM ETA++++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+
Sbjct: 608 SQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGA 667
Query: 667 FTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGY 726
F +FATHFHE+ L+ IPT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +
Sbjct: 668 FCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANF 727
Query: 727 PEDMLEQARDL---MKEYEY-----SLDTKTPSGDETNNREEEYFKTVQE 768
P+ ++E A+ ++E++Y D P+ E+ K +QE
Sbjct: 728 PKHVIECAKQKALELEEFQYIGESQGYDNMEPATKRCYLEREQGEKIIQE 777
>gi|390599866|gb|EIN09262.1| DNA mismatch repair protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 978
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/718 (35%), Positives = 401/718 (55%), Gaps = 66/718 (9%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK------N 139
T +GVA D ++ + + D+D +SN E++I+Q KECL+P ++ N
Sbjct: 183 TKNIGVAFADTTLREIGVADFADNDLFSNTESLIIQLGIKECLVPTGTVSGKTDRDVDLN 242
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
K+ +L+R V T RK +EF+ + D+ RL++ + S A ++ L A L
Sbjct: 243 KLKAVLERCGVVCTERKPSEFNSRSVEDDLTRLLKPEASSSTTASTSEQLSLPVAPASLN 302
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP-QQGSTSAQTYDSLLGI 258
+LI YL L+++ N ++I + D S+++ + ++ + +L+++ G TSA +LLG+
Sbjct: 303 ALITYLSLLSDPANHGTWTIRTHDLSQFMKLDASALRALNLVDGPNGETSANKNTTLLGL 362
Query: 259 LDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQS 318
L++C+T QG R+LA W+KQPL +L I +R V I V + +R L + L+ +PD+
Sbjct: 363 LNKCKTAQGTRMLASWLKQPLVNLHEIRKRQDLVEIFVEDANSRRTLQDEYLKLMPDLHR 422
Query: 319 LAMRIGRKKAGLKDCYRVYEGVSQLPKLIS------------------------------ 348
++ R + A L+D RVY+ V +LP +I
Sbjct: 423 ISKRFQKNAASLEDVVRVYQAVLKLPGIIESLANVESTSMHAKELIDEIYLVKLREYDGS 482
Query: 349 ------ILESLVQNVEASNLNTILS-----SLQSL--KMMDRKDAVMDKMKEYLESTARR 395
++E+ + E N N ++ LQ L K+M +D + D+ +E R
Sbjct: 483 LNKYGEMVETTIDLNELDNHNYVIKPDYDPKLQELAEKLMKTRDGLDDEHRE----VGRD 538
Query: 396 LNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQ 452
L L DK I LENSP G+ +R+T ++ ++ ++ Y L T + G F L +
Sbjct: 539 LGLELDKQIFLENSPTYGYCFRLTKGVSKAVHNKKNYYELATTKSGAFFTTSNLRDLANE 598
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
Y+ + Y Q +V+E++ I++ YT L + VLA DV++S + + AP+ YV+P
Sbjct: 599 YKDLTDLYARTQAGLVKEIVSIASTYTPVLELFNVVLAHLDVILSMAHVAVNAPEAYVKP 658
Query: 513 CMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSI 572
+ G+ SL+L RHP +E+Q +S+IPNDV GE F ++TGPNMGGKSTYIR +
Sbjct: 659 KVLQKGSSSLILKAARHPCLEVQDDISFIPNDVEMIKGEGEFQIITGPNMGGKSTYIRQV 718
Query: 573 GVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
GV +AQ+G FVPC+ A + + D I RVGA DSQ +GISTFM EM ETA +++ + N
Sbjct: 719 GVIALMAQVGSFVPCEEAQLPIFDSILCRVGAGDSQLKGISTFMAEMLETAAILRSASSN 778
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV 692
SL+IIDELGRGTST+DGFG+A +I+ +AS F +FATHFHE+ L + +P RN+ V
Sbjct: 779 SLIIIDELGRGTSTYDGFGLAWAISEHIASKIHAFCMFATHFHELTSLDQQLPHVRNLHV 838
Query: 693 --------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
S L D + LLY+V+PG C +S+G+H A++A +P+ +++ AR E E
Sbjct: 839 VAHVSKRGSELNDRD-ITLLYKVEPGVCDQSFGIHVAELANFPQSVVKLARRKANELE 895
>gi|336467575|gb|EGO55739.1| hypothetical protein NEUTE1DRAFT_124099 [Neurospora tetrasperma
FGSC 2508]
gi|350287773|gb|EGZ69009.1| DNA mismatch repair protein msh-2 [Neurospora tetrasperma FGSC
2509]
Length = 937
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/717 (35%), Positives = 389/717 (54%), Gaps = 68/717 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVT 143
TVGV D ++ + E D+D YSN EA+++Q KEC++ + K+ K+
Sbjct: 150 TVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVKECIVTQDKGEKEKDPELAKLRQ 209
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I+D V + R EF +D+ QD++RL++ + + A LLP+ L A +LI
Sbjct: 210 IIDNCGVAIAERSAGEFGTKDIEQDLSRLLK----DERAASLLPQTDLKLAMGSASALIK 265
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL ++++ N Q+ ++ D ++++ + +A + +L+++P G+ SL G+L+ C+
Sbjct: 266 YLGILHDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMP--GARDGAKNMSLYGLLNHCK 323
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLL+QW+KQPL + + I +R V N+TE R ++ E LR +PD+ L+ R
Sbjct: 324 TPVGSRLLSQWLKQPLMNAEEIEKRQQLVEAFANDTELRQSMQEEHLRSIPDLYRLSKRF 383
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-----------LSSLQ-- 370
R KA L+D R Y+ V +LP I LE ++ L+ + L LQ
Sbjct: 384 QRGKATLEDVVRAYQVVIRLPGFIGTLEGVMDEAYRDPLDEVYTNKLRELSDSLVKLQEM 443
Query: 371 -----------------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIKL 406
SL+++ +K D + M A L +K I L
Sbjct: 444 VETTVDLDALDNHEFIIKPEFDDSLRIIRKKLDRLRTDMDNEFAEAAEDLGQEREKKIFL 503
Query: 407 ENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ R+T I + RY T + GV F L ++ + + Y
Sbjct: 504 ENHKVHGWCMRLTRTEAGCIRNNSRYLECSTQKNGVYFTTKTLQALRREFDQLSQNYNRT 563
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q S+V EV+G++A Y L +L+ VLA DV+VSF+ S AP YVRP + P GTG V
Sbjct: 564 QSSLVNEVVGVAASYCPVLERLAAVLAHLDVIVSFAHCSVHAPISYVRPKIHPRGTGRTV 623
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q V++I NDV + SF ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 624 LTEARHPCMEVQDDVTFITNDVTLTREDSSFLIITGPNMGGKSTYIRQIGVIALMAQIGC 683
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC SA +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 684 FVPCSSAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRG 743
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA--------- 694
TST+DGFG+A +I+ + F LFATHFHE+ L+ P +N+ V+A
Sbjct: 744 TSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTALADQYPNVKNLHVTAHISGTDTDT 803
Query: 695 ---------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 804 DVITDEDEKAKKKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE 860
>gi|350633597|gb|EHA21962.1| hypothetical protein ASPNIDRAFT_183201 [Aspergillus niger ATCC
1015]
Length = 1653
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/714 (36%), Positives = 398/714 (55%), Gaps = 68/714 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL--LPAEYLNDNKNKIVTIL 145
+VGV D ++ + E D+D YSNLE++++Q KECL + A + K+ I+
Sbjct: 162 SVGVCFADASVRELGVSEFLDNDVYSNLESLVIQLGVKECLVQMDAGRKDVELGKVRNIM 221
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
D + ++ R +F D+ QD+ RL+R + ++A LP+ L A +LI YL
Sbjct: 222 DSCGIAVSERHSGDFGVRDIEQDLTRLLR----DERSAGTLPQTELKLAMGSAAALIKYL 277
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+M + N Q+ ++ D S+++ + S+ + +L+++P G SL G+L+ C+TP
Sbjct: 278 GVMTDPSNFGQYRLYQHDLSQFMKLDSSALRALNLMP--GPRDGSKSMSLFGLLNHCKTP 335
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLLAQW+KQPL D I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 336 VGSRLLAQWLKQPLMDKAEIEKRQQLVESFVMDTELRQTMQEEHLRSIPDLYRLAKRFQR 395
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQN-----VEAS----------NLNTI----- 365
K+A L+D RVY+ +LP ++ LE+++ +EA NL +
Sbjct: 396 KQATLEDVVRVYQVAIRLPGFVASLENVMDEQYQTPLEAEYTSKLRSHSDNLAKLEEMVE 455
Query: 366 ----LSSL------------QSLKMMDRKDAVMDKMKEYLESTARR----LNLVADKTIK 405
L +L +SL+++ +K +DK++ ++S RR L+ DK +
Sbjct: 456 TTVDLDALENHEFIIKPEFDESLRIIRKK---LDKLRHDMDSEHRRVGRDLDQEVDKKLF 512
Query: 406 LENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
LEN G+ +R+T I ++ Y T + GV F + ++ + Y
Sbjct: 513 LENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSSNYNR 572
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q +V EV+G++A Y L QL+ VLA DV+VSF+ + AP PYVRP + P GTG+
Sbjct: 573 TQTGLVSEVVGVAASYCPVLEQLAGVLAHLDVIVSFAHCAVHAPTPYVRPKIHPRGTGNT 632
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
VL + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ G
Sbjct: 633 VLKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTG 692
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGR
Sbjct: 693 CFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGR 752
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL------ 695
GTST+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 753 GTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKSAKNLHVVAFIGDGTG 812
Query: 696 -------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ D + LLY+V+PG C +S+G+H A++ +PE ++ AR E E
Sbjct: 813 NEEDSKDSKRDQVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKADELE 866
>gi|240280777|gb|EER44281.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
gi|325088962|gb|EGC42272.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 941
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/711 (36%), Positives = 396/711 (55%), Gaps = 63/711 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+ E + K+ +ILD
Sbjct: 156 VGVCFADASVRELGVSEFVDNDLYSNFESLVIQLGVKECLIMMESQKKDVELGKLRSILD 215
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R +F +D+ QD++RL+R + + A +LP+ L A +LI YL
Sbjct: 216 NCGIAISQRPMADFGTKDIEQDLSRLLR----DERVAGILPQTDLKLAMGAAAALIKYLG 271
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D S+Y+ + +A + +L+++P G SL G+L+ C+TP
Sbjct: 272 AMSDATNFGQYRLYQHDLSQYMKLDAAALRALNLMP--GPRDGAKNMSLYGLLNHCKTPV 329
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + + I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 330 GSRLLAQWLKQPLMNHEDIEKRQQLVEAFVVDTELRQTMQEDHLRSIPDLYRLAKRFQRD 389
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESL----------------VQNVEA--SNLNTILSS 368
A L+D RVY+ V +LP I+ LE++ ++N+ S L ++ +
Sbjct: 390 MANLEDVVRVYQVVIRLPGFINTLENVMDEQYQGPLETEYTTKLRNISDNFSKLAEMVET 449
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLES----TARRLNLVADKTIKLENS 409
L +D + + +D++K +++ R LN DK + LEN
Sbjct: 450 TVDLDALDNHEFIIKPEFDDSLRIIKKKLDRLKHDMDTEHKIVGRDLNQDTDKKLLLENH 509
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T + I ++ Y T + GV F + + ++ + Y Q
Sbjct: 510 RVHGWCFRLTRNEASCIRNKREYQECSTQKNGVYFTTSTMLSLRREHDQLSSNYNRTQTG 569
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V+EV+ ++A Y L QL+ VLA DV+VSF+ S AP YVRP + P GTG+ VL +
Sbjct: 570 LVQEVVNVAASYCPLLEQLASVLAHLDVIVSFAHVSVHAPTAYVRPKIHPRGTGNTVLKE 629
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 630 ARHPCMEMQDDISFITNDVSLLRNESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 689
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 690 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 749
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---------- 695
+DGFG+A +I+ + + + F LFATHFHE+ L P + +N+ V A
Sbjct: 750 YDGFGLAWAISEHIVTEIRCFALFATHFHELTALQERYPNSVKNLHVVAFINDGPEGKQH 809
Query: 696 ----EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 810 SSTDKKKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELE 860
>gi|224118890|ref|XP_002317931.1| predicted protein [Populus trichocarpa]
gi|222858604|gb|EEE96151.1| predicted protein [Populus trichocarpa]
Length = 944
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 290/847 (34%), Positives = 447/847 (52%), Gaps = 117/847 (13%)
Query: 4 YLFFF---PQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
+L FF P + +R F+R ++Y VH E+A I + + ++ +G L +V
Sbjct: 26 FLSFFKTLPHDPRA-VRVFDRRDYYTVHAENATFIAKTYYHTTTALRQLGSGSNGLSSVS 84
Query: 60 VNKSNLSCFSHILCVISEDKTLE------------------------------------- 82
++K+ + L + D TLE
Sbjct: 85 ISKNMFETIARDLLLERTDHTLELYEGSGSNWKLVKSGTPGNLGSFEDVLFANNDMQDSP 144
Query: 83 ---TVLTN------TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
+L N TVG++ VDL + + E DD +++N+E+ +V S KECLLP E
Sbjct: 145 VVVALLLNFREKGCTVGLSYVDLTKRVLGLAEFLDDSHFTNVESALVALSCKECLLPMES 204
Query: 134 LNDNKNKIV-TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
N + + +L + V +T RKKNEF DL+QD+ RLV+ L+ R L
Sbjct: 205 GKSNDCRTLHDVLTKCGVMLTERKKNEFKTRDLVQDLGRLVK---GPLEPVRDLVS-GFE 260
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A L +L++Y EL+ +E N + I + Y+ + SA +L+VL + T A
Sbjct: 261 FAPGALGALLSYAELLADESNYGNYRIRKYNLDSYMRLDSAATRALNVL--ESKTDANKN 318
Query: 253 DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+++R C G RLL W+KQPL ++DAI R V V++T R +L ++ L+
Sbjct: 319 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLEVDAINSRLDLVQAFVDDTGLRQDLRQH-LK 377
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQN-------- 356
+ D++ L + + +AGL ++Y+ + +LP + LE SL++
Sbjct: 378 RISDIERLMHIVEKGRAGLHHIVKLYQSIIRLPYIKGALERYDGQFSSLIKEKYLESLEV 437
Query: 357 -VEASNLNTILSSLQSLKMMDRKD-----------AVMDKMKEYLES-----------TA 393
+ ++LN ++ +++ +D+ D A + +K ES TA
Sbjct: 438 WTDDNHLNKFIALVETAVDLDQLDNGEYMISPGYEAALGALKAEQESLEHQIHNLHKQTA 497
Query: 394 RRLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLAT 448
L+L DK +KL+ Q G +RIT K + + ++ +L+T + GV+F + +L
Sbjct: 498 SDLDLPLDKGLKLDKGTQYGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 557
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFS-IASTCAPK 507
QYQ I Y++ Q+ +V V+ I+A +++ +LS +L++ DVL+SF+ +AS+C P
Sbjct: 558 LGDQYQKIVENYKSRQKELVSRVVQITATFSEVFEKLSGLLSEMDVLLSFADLASSC-PT 616
Query: 508 PYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
PY RP + P G ++L RHP VE Q V++IPND G+ F ++TGPNMGGKST
Sbjct: 617 PYTRPDITPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKST 676
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
+IR IGV++ +AQ+G F+PCD ATISV D IF RVGA D Q RG+STFM EM ETA+++K
Sbjct: 677 FIRQIGVNILMAQVGSFIPCDKATISVRDCIFARVGAGDCQMRGVSTFMQEMLETASILK 736
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-- 685
T+ SL+IIDELGRGTST+DGFG+A +I L + TLFATHFHE+ L+ P
Sbjct: 737 GATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVRELKAPTLFATHFHELTALAHQKPDQ 796
Query: 686 --------TFRNVQVSALEQEDN--LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
N VSA N L +LY+V+PG+C +S+G+H A+ A +PE ++ AR
Sbjct: 797 EPHAKQIVGVANYHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 856
Query: 736 DLMKEYE 742
+ E E
Sbjct: 857 EKAAELE 863
>gi|393219867|gb|EJD05353.1| DNA mismatch repair protein MSH2 [Fomitiporia mediterranea MF3/22]
Length = 962
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/718 (36%), Positives = 401/718 (55%), Gaps = 64/718 (8%)
Query: 84 VLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK----- 138
+ T VGVA D ++ + E D D +SN+E++++Q S KE ++P N
Sbjct: 166 IKTKAVGVAFADTSVREIGISEFVDSDLFSNIESLVIQLSVKEAVIPMSSKTGNTDRDLE 225
Query: 139 -NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHC 197
NK+ + +R V +T RK ++F+ +++ QD+ LV+ + A + PE+ +T+
Sbjct: 226 LNKLKGVFERCGVVITERKPSDFAAKNIEQDLALLVKTNTGVDITASI-PELSSSTSAAA 284
Query: 198 LRS--LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
+ LI+YL L+ + N N + + + D S+++ + ++ + +L L +TSA+ +L
Sbjct: 285 SATSALISYLSLLGDASNHNAYVLKTHDLSQFMKLDASALRALG-LAGDSTTSAKNT-TL 342
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
G+L++C+T QG RLL W+KQPL +L I +R V ++++ R L + LR +PD
Sbjct: 343 HGLLNKCKTGQGTRLLGSWLKQPLVNLHEIQKRQDLVQTFIHDSNTRRTLQDDYLRMMPD 402
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES----------LVQNVEASNLNTI 365
M ++ R R A L+D RVY+ +L LI LE+ L++ + L
Sbjct: 403 MHRISKRFQRSVATLEDVVRVYQAAQKLVGLIEALETVETEDVGHNKLIEEIYLIKLKEH 462
Query: 366 LSSLQSLKMM----------------------DRKDAVMDKMKEYLES-------TARRL 396
+L+ M DR + DK+ E + R L
Sbjct: 463 SQNLEKYSEMVEQTLDLDELSSHNFVIKPDYDDRLRELADKLIEIRDGLDAEHRKVGRDL 522
Query: 397 NLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATANT 451
L DK + LENS G+ +RIT ++N D Y L T + GV F +L +
Sbjct: 523 GLELDKKLHLENSQNYGYCFRITKSDAKVIHNEKD--YIELGTNKSGVYFTTKKLRSLAM 580
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
+Q I Y Q S+V+EV+ I+A YT L L D +A DV+VSF+ S AP+ YVR
Sbjct: 581 DFQEITDTYSRTQSSLVKEVVNIAATYTPVLEALDDQIAHLDVIVSFAHVSANAPEEYVR 640
Query: 512 PCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
P + G+GS+VL RHP++E+Q +S+IPNDV GE F ++TGPNMGGKSTYIR
Sbjct: 641 PKLSVKGSGSVVLKNARHPLLEVQDDISFIPNDVEMIKGESEFQIITGPNMGGKSTYIRQ 700
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
+GV +AQ GCFVPC A + + D I RVGA DSQ +G+STFM EM ETAT++K ++
Sbjct: 701 VGVIALMAQTGCFVPCSEAELPIFDSILCRVGAGDSQLKGVSTFMAEMLETATILKSASQ 760
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
+SL+IIDELGRGTST+DGFG+A +I+ +AS F LFATHFHE+ L + IP +N+
Sbjct: 761 DSLIIIDELGRGTSTYDGFGLAWAISEYIASEIHAFCLFATHFHELTALDQQIPHVKNLH 820
Query: 692 VSA-------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V A Q+ ++ LLY+V+PG C +S+G+H A++A +PE +++ A+ E E
Sbjct: 821 VVAHVSKTGESSQDRDITLLYKVEPGICDQSFGIHVAELANFPESVVKLAKRKADELE 878
>gi|115396094|ref|XP_001213686.1| DNA mismatch repair protein msh-2 [Aspergillus terreus NIH2624]
gi|114193255|gb|EAU34955.1| DNA mismatch repair protein msh-2 [Aspergillus terreus NIH2624]
Length = 1349
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 261/717 (36%), Positives = 395/717 (55%), Gaps = 74/717 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-----NKIV 142
+VGV D ++ + E D+D YSN E++++Q KECL+ ++ N+ KI
Sbjct: 567 SVGVCFADASVRELGVSEFLDNDVYSNFESLVIQLGVKECLV---QMDTNRKDVELGKIR 623
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
I D + ++ R +F +D+ QD+ RL+R + S A LP+ L A +LI
Sbjct: 624 AIADTCGIAISERPVADFGIKDIEQDLTRLLRAEHS----AATLPQTELKLAMGSAAALI 679
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
YL +M++ N Q+ ++ D S+++ + ++ + +L+++P G SL G+L+ C
Sbjct: 680 KYLGVMSDPTNFGQYQLYQHDLSQFMKLDASALRALNLMP--GPRDGSRSMSLFGLLNHC 737
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
+TP G RLLAQW+KQPL DL I +R V V NTE R + E LR +PD+ LA R
Sbjct: 738 KTPVGSRLLAQWLKQPLMDLGEIEKRQQLVEAFVENTELRQTMQEEHLRSIPDLYRLAKR 797
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSL------------- 369
RK+A L+D RVY+ +LP ++ LE+++ + L T +S
Sbjct: 798 FQRKQANLEDVVRVYQVAIRLPGFVASLENVMDEQYQTPLETEYTSKLRSHSDSLAKLEE 857
Query: 370 -----------------------QSLKMMDRKDAVMDKMKEYLESTARR----LNLVADK 402
+SL+++ +K +DK++ + RR L DK
Sbjct: 858 MVETTVDLDALENHEFIIKPEFDESLRIIRKK---LDKLRHDMNVEHRRVSRDLGQEVDK 914
Query: 403 TIKLENSP-QGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQYQAIQRE 459
+ LEN G+ +R+T I + Y T + GV F + T ++ +
Sbjct: 915 KLFLENHRVHGWCFRLTRNEAGCIRNAKEYQECSTQKNGVYFTTSTMQTLRREHDQLSSN 974
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
Y Q +V EV+ ++A Y L QL+ VLA DV+VSF+ AS AP YVRP + P GT
Sbjct: 975 YNRTQTGLVHEVVNVAASYCPVLEQLAGVLAHLDVIVSFAHASVHAPSSYVRPKIHPRGT 1034
Query: 520 GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
G+ VL + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +A
Sbjct: 1035 GNTVLKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMA 1094
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDE
Sbjct: 1095 QTGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDE 1154
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL--- 695
LGRGTST+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 1155 LGRGTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKSVKNLHVVAFIGD 1214
Query: 696 ----------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++++ LLY+V+PG C +S+G+H A++ +P+ ++ AR +E E
Sbjct: 1215 GTSGDNEENKSKQNHVTLLYRVEPGICDQSFGIHVAELVRFPDKVVNMARQKAEELE 1271
>gi|308808672|ref|XP_003081646.1| Mismatch repair ATPase MSH4 (MutS family) (ISS) [Ostreococcus
tauri]
gi|116060111|emb|CAL56170.1| Mismatch repair ATPase MSH4 (MutS family) (ISS) [Ostreococcus
tauri]
Length = 913
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 271/819 (33%), Positives = 425/819 (51%), Gaps = 113/819 (13%)
Query: 16 IRFFNRVEFYCVHGEDAELIQRK-SNVVYLVKTMGQKDKTLETVLVNKSNL-SCFSHILC 73
+RFF+R +FY VHG DAE + R ++K G+ + L V +N++ + +L
Sbjct: 29 VRFFDRRDFYSVHGADAEYVARTFYKTTSVIKHTGRGEDALAGVTLNRAMFETALRELLI 88
Query: 74 VISEDKTLE----------TVLTNT----------------------------------- 88
+E +E L+ T
Sbjct: 89 EGAEGARVELYEESKPSGTWTLSKTASPGRTQAFEEELFRSNEMSDAAVVCAVRATSGGG 148
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNK-IVTILDR 147
VGVA V+ T++ DD+ + LE+++ Q KEC++P E L + + + ++ R
Sbjct: 149 VGVAYVNATTRELGACAFVDDEQFCTLESVLCQMGAKECVVPKEGLETPEGRRLRDVVAR 208
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
T R EF DL D++RL++ ++ R + + + A CL +++ + E+
Sbjct: 209 CGALATERPSREFDVLDLESDLDRLIK---GNVEAHRAVIDQPNSAA--CLAAVLRFSEM 263
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + N + S+ D +Y+ + ++ + +L+ G+L++CRTP G
Sbjct: 264 LADSANHGRCSLSMYDTGRYMRLDASALRALNSF---------------GLLNKCRTPMG 308
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL++W+KQPL D+ I +RH V+ VN+ E R L LR LPD++ + ++ R+K
Sbjct: 309 RRLLSRWLKQPLVDVGEIAQRHDVVHEFVNSAEVRDALRSAHLRSLPDIERITRKLERRK 368
Query: 328 AGLKDCYRVYEGVSQLPKLISILE----------------SLVQNVEASNLNTILSSLQS 371
A L D R+Y+ + LP + LE L + + S+L L++
Sbjct: 369 ATLMDLCRLYQASAALPHMAEALERCEGRFADFIRTKYADELKKFSDPSHLGRFEGLLEA 428
Query: 372 L---------------------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NS 409
++ +KD + + ++ ++ L + DK +KLE N+
Sbjct: 429 AVDLSKIPDEYVICASYDAELGELQKQKDVLEEDIRSAFADASKDLGMERDKQLKLEHNN 488
Query: 410 PQGFAYRITMKLNNSIDDR----YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQ 465
G+ R+T K S+ + Y IL+ + G +F + +L + Q A+ R YE Q+
Sbjct: 489 MHGWFMRLTKKDETSVRKKLSVSYQILEAKKDGTKFTNKKLRALSEQRVALDRSYEAKQR 548
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
+VE V+ ++A +++ +S + A+ DVLVSF+ + AP P+VRP M+ + ++ L
Sbjct: 549 HLVERVVDVAASFSEVFLNVSAMAAEIDVLVSFAEVAVSAPVPFVRPIMQEKSSDTIHLE 608
Query: 526 QCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
CRHP VE Q V +I N K GE F ++TGPNMGGKST+IR +GV V LAQIG FV
Sbjct: 609 NCRHPNVEAQDNVRFIANTCSMKKGESWFQIITGPNMGGKSTFIRQVGVCVLLAQIGSFV 668
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
PCD ATI+V D IF RVGA D Q RGISTFM EM ETA ++K T +SLVIIDELGRGTS
Sbjct: 669 PCDEATIAVRDAIFARVGAGDCQLRGISTFMAEMLETAAILKAATPSSLVIIDELGRGTS 728
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL--EQEDNLVL 703
T+DGFG+A +I+ + + Q +FATHFHE+ L + N V AL + L +
Sbjct: 729 TYDGFGLAWAISEHIVNEIQAPCMFATHFHELTAL-KGASGVANFHVEALIDQASRKLTM 787
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LYQ+KPG+C +S+G+HCA+ A +PE++L+ AR +E E
Sbjct: 788 LYQIKPGACDQSFGIHCAEFARFPEEVLKVARQKAEELE 826
>gi|225560675|gb|EEH08956.1| DNA mismatch repair protein msh-2 [Ajellomyces capsulatus G186AR]
Length = 941
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/711 (36%), Positives = 395/711 (55%), Gaps = 63/711 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+ E + K+ +ILD
Sbjct: 156 VGVCFADASVRELGVSEFVDNDLYSNFESLVIQLGVKECLIMMESQKKDVELGKLRSILD 215
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R +F +D+ QD++RL+R + + A +LP+ A +LI YL
Sbjct: 216 NCGIAISQRPMADFGTKDIEQDLSRLLR----DERVAGILPQTDFKLAMGAAAALIKYLG 271
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D S+Y+ + +A + +L+++P G SL G+L+ C+TP
Sbjct: 272 AMSDATNFGQYRLYQHDLSQYMKLDAAALRALNLMP--GPRDGAKNMSLYGLLNHCKTPV 329
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + + I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 330 GSRLLAQWLKQPLMNHEDIEKRQQLVEAFVVDTELRQTMQEDHLRSIPDLYRLAKRFQRD 389
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESL----------------VQNVEA--SNLNTILSS 368
A L+D RVY+ V +LP I+ LE++ ++N+ S L ++ +
Sbjct: 390 MANLEDVVRVYQVVIRLPGFINTLENVMDEQYQGPLETEYTTKLRNISDNFSKLAEMVET 449
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLES----TARRLNLVADKTIKLENS 409
L +D + + +D++K +++ R LN DK + LEN
Sbjct: 450 TVDLDALDNHEFIIKPEFDDSLRIIKKKLDRLKHDMDTEHKIVGRDLNQDTDKKLFLENH 509
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T + I ++ Y T + GV F + + ++ + Y Q
Sbjct: 510 RVHGWCFRLTRNEASCIRNKREYQECSTQKNGVYFTTSTMLSLRREHDQLSSNYNRTQTG 569
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V+EV+ ++A Y L QL+ VLA DV+VSF+ S AP YVRP + P GTG+ VL +
Sbjct: 570 LVQEVVNVAASYCPLLEQLASVLAHLDVIVSFAHVSVHAPTAYVRPKIHPRGTGNTVLKE 629
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 630 ARHPCMEMQDDISFITNDVSLLRNESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 689
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 690 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 749
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---------- 695
+DGFG+A +I+ + + + F LFATHFHE+ L P + +N+ V A
Sbjct: 750 YDGFGLAWAISEHIVTEIRCFALFATHFHELTALQERYPNSVKNLHVVAFINDGAEGKQH 809
Query: 696 ----EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 810 SSTDKKKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELE 860
>gi|116203461|ref|XP_001227541.1| DNA mismatch repair protein msh-2 [Chaetomium globosum CBS 148.51]
gi|88175742|gb|EAQ83210.1| DNA mismatch repair protein msh-2 [Chaetomium globosum CBS 148.51]
Length = 942
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 262/730 (35%), Positives = 389/730 (53%), Gaps = 69/730 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVT 143
VGV D ++ + E D+D YSN EA+++Q KECL+ E + K+ K+
Sbjct: 150 AVGVCFADASVRELGVSEFLDNDSYSNFEALLIQLGVKECLIHMEKADKEKDPELAKVKQ 209
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I+D V ++ R +F +D+ QD+ RL++ + ++A LLP+ L A +LI
Sbjct: 210 IIDNCGVAISERPVADFGIKDIEQDLARLLK----DERSATLLPQTDLKLAMGSAAALIQ 265
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL ++++ N Q+ ++ D ++++ + +A + +L+++P G+ SL G+L+ C+
Sbjct: 266 YLGVLHDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMP--GARDGSKTMSLFGLLNHCK 323
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLLAQW+KQPL D + I +R V N+TE R + E LR +PD+ LA R
Sbjct: 324 TPVGSRLLAQWLKQPLMDKNEIEKRQQLVEAFANDTELRQTMQEEHLRSIPDLYRLAKRF 383
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILE------------------------SLVQNVEA 359
RKKA L+D R Y+ V +LP + LE SLV+ E
Sbjct: 384 QRKKANLEDVVRAYQAVIRLPGFLGTLEGVMDETYRDPLDEAYTNKLRELSDSLVKLQEM 443
Query: 360 SNLNTILSSLQ------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIKL 406
L +L SL+++ ++ D + +M A L DK I L
Sbjct: 444 VETTVDLDALDNHEFIIKPEFDDSLRIIRKRLDRLRSEMDREFADAASDLGQERDKKIFL 503
Query: 407 ENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ R+T I RY T + GV F L ++ + + Y
Sbjct: 504 ENHKVHGWCMRLTRTEAGCIRQKSRYQECSTQKNGVYFTTKTLQGYRREFDQLSQNYNRT 563
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+G+++ Y+ L +L VLA DV+VS + S AP YVRP + P G G V
Sbjct: 564 QSGLVNEVVGVASSYSPVLEKLGGVLAHLDVIVSLAHCSVHAPISYVRPTIHPRGEGQTV 623
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q V +I NDV + SF ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 624 LVEARHPCLEMQDDVQFITNDVELTRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQIGC 683
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC SA +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 684 FVPCSSAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRG 743
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL-------- 695
TST+DGFG+A +I+ + LFATHFHE+ L+ P RN+ V+A
Sbjct: 744 TSTYDGFGLAWAISEHIVKEIGCSALFATHFHELTALADQYPQVRNLHVTAHISGSSSAA 803
Query: 696 ----------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSL 745
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 804 TAEKKKQKAEDEKREVTLLYKVEPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELE-DF 862
Query: 746 DTKTPSGDET 755
+ GD T
Sbjct: 863 TSAKQDGDST 872
>gi|336273216|ref|XP_003351363.1| MSH2 protein [Sordaria macrospora k-hell]
gi|380092884|emb|CCC09637.1| putative MSH2 protein [Sordaria macrospora k-hell]
Length = 934
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/714 (35%), Positives = 388/714 (54%), Gaps = 65/714 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVT 143
VGV D ++ + E D+D YSN EA+++Q KEC++ + K+ K+
Sbjct: 150 AVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVKECIITQDKGEKEKDPELAKLRQ 209
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I+D V ++ R EF +D+ QD++RL++ + + A LLP+ L A +LI
Sbjct: 210 IIDNCGVAVSERPAGEFGIKDIEQDLSRLLK----DERAATLLPQTDLKLAMGSAAALIK 265
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL ++++ N Q+ ++ D ++++ + +A + +L+++P G+ SL G+L+ C+
Sbjct: 266 YLGVLHDSSNFGQYQLYQHDLAQFMKLDAAALKALNLMP--GARDGAKNMSLYGLLNHCK 323
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLL+QW+KQPL + + I +R V N+TE R + E LR +PD+ L+ R
Sbjct: 324 TPVGSRLLSQWLKQPLMNAEEIEKRQQLVEAFANDTELRQTMQEEHLRSIPDLYRLSKRF 383
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-----------LSSLQ-- 370
R KA L+D R Y+ V ++P I LE ++ L+ + L LQ
Sbjct: 384 QRGKATLEDVVRAYQVVIRVPGFIGTLEGVMDEAYRDPLDEVYTNKLRELSDSLVKLQEM 443
Query: 371 -----------------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIKL 406
SL+++ +K D + M A L +K I L
Sbjct: 444 VETTVDLDALDNHEFIIKPEFDDSLRIIRKKLDRLRTDMDNEFADAADDLGQEREKKIFL 503
Query: 407 ENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ R+T I + RY T + GV F L T ++ + + Y
Sbjct: 504 ENHKVHGWCMRLTRTEAGCIRNNSRYLECSTQKNGVYFTTKTLQTLRREFDQLSQNYNRT 563
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q S+V EV+G+++ Y L +L+ VLA DV+VSF+ S AP YVRP + P GTG V
Sbjct: 564 QSSLVNEVVGVASSYCPVLERLAAVLAHLDVIVSFAHCSVHAPTSYVRPKIHPRGTGRTV 623
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q V++I NDV + SF ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 624 LTEARHPCMEVQDDVTFITNDVTLSREDSSFLIITGPNMGGKSTYIRQIGVIALMAQIGC 683
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC SA +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 684 FVPCSSAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRG 743
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL-------- 695
TST+DGFG+A +I+ + F LFATHFHE+ L+ P +N+ V+A
Sbjct: 744 TSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTALADQYPNVKNLHVTAHISGTDADT 803
Query: 696 -------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ + LLY+V PG C +S+G+H A++ +PE ++ A+ E E
Sbjct: 804 DADSEKEKKKREVTLLYKVSPGVCDQSFGIHVAELVRFPEKVVRMAKRKADELE 857
>gi|171679627|ref|XP_001904760.1| hypothetical protein [Podospora anserina S mat+]
gi|170939439|emb|CAP64667.1| unnamed protein product [Podospora anserina S mat+]
Length = 925
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 273/841 (32%), Positives = 423/841 (50%), Gaps = 105/841 (12%)
Query: 1 HKFYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAEL----IQRKSNVV------------ 42
H F ++ P+ + IR F+R ++Y HGEDA + + ++VV
Sbjct: 19 HGFIRYYKSLPKVDEDVIRIFDRGDWYTAHGEDANFIARTVYKTTSVVRQLGKNDHTGLP 78
Query: 43 -----------YLVKTMGQKDKTLETVLVNKSNLSC---------------------FSH 70
+L + + + K +E ++ F
Sbjct: 79 SVTMTVTVFRQFLREALYKLGKRIEIYASPNGRMNWKIVKQASPGNLQDVEDELGGQFEG 138
Query: 71 ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
+++ T++ TVGV D ++ + E D+D YSN E++++Q KECL+
Sbjct: 139 APVILAVKITVKASEGRTVGVCFADASVRELGVSEFLDNDLYSNFESLVIQLGVKECLMQ 198
Query: 131 AEYLNDNKN----KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
+ NK+ K+ ILD + ++ R EF +D+ QD+ RL++ + ++A LL
Sbjct: 199 IDKAEKNKDPELAKLRQILDSCGIAVSERPAGEFGTKDIEQDLARLLK----DERSATLL 254
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
P+ L A +LI YL ++++ N + ++ D ++++ + +A + +L+++P G+
Sbjct: 255 PQTDLKLAMGSAAALIKYLGVLHDPSNFGHYQLYQHDLAQFMKLDAAALKALNLMP--GA 312
Query: 247 TSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLH 306
SL G+L+ C+TP G RLL+QW+KQPL D I +R V + VN+TE R +
Sbjct: 313 RDGAKTMSLYGLLNHCKTPVGSRLLSQWLKQPLMDKAEIEKRQQLVEVFVNDTELRQTMQ 372
Query: 307 EYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVE-------- 358
E LR +PD+ L+ R RKKA L+D R Y+ V LP + LE ++
Sbjct: 373 EEHLRSIPDLYRLSKRFQRKKATLEDVVRAYQVVILLPGFLCTLEGVMDEAARDPLDEAY 432
Query: 359 ASNLNTILSSLQSLKMM-----------------------------DRKDAVMDKMKEYL 389
+ L + +SL L+ M R D + M +
Sbjct: 433 TNKLRELSNSLVKLQEMVETTVDLDALENHEFIIKPDFDDGLRIIRKRLDKLRSDMDKEF 492
Query: 390 ESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRL 446
A L+ DK I LEN G+ R+T + I + RY T + GV F L
Sbjct: 493 SEAANDLDQERDKKIFLENHKVHGWCMRLTRTEASCIRNKSRYQECSTQKNGVYFTTKTL 552
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ + + Y Q +V EV+G++A Y L +L VLA DV+VS + + AP
Sbjct: 553 QAYRREFDQLSQNYNRTQSGLVNEVVGVAASYCPVLEKLGGVLAHLDVIVSLAHCAENAP 612
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
Y RP + P G G +L RHP +E+Q V++I NDV SF ++TGPNMGGKS
Sbjct: 613 VSYARPKIHPRGQGQTILTGARHPCMEMQDDVTFITNDVSLTRDSSSFLIITGPNMGGKS 672
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR IGV +AQIG FVPC+SA +++ D I RVGA+DSQ +G+STFM EM ETA ++
Sbjct: 673 TYIRQIGVIALMAQIGSFVPCESAELTIFDSILARVGASDSQLKGVSTFMAEMLETANIL 732
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
K T SL+IIDELGRGTST+DGFG+A +I+ + F LFATHFHE+ L+ P
Sbjct: 733 KSATSESLIIIDELGRGTSTYDGFGLAWAISEHIIQQIGCFALFATHFHELTALAEKYPQ 792
Query: 687 FRNVQVSALEQED-----NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY 741
+N+ V+A D + LLY++ PG C +S+G+H A++ +P+ ++ A+ E
Sbjct: 793 VQNLHVTAHITSDRDVKREVTLLYKLAPGICDQSFGIHVAELVRFPDKVVRMAKRKADEL 852
Query: 742 E 742
E
Sbjct: 853 E 853
>gi|303310697|ref|XP_003065360.1| DNA mismatch repair protein msh-2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105022|gb|EER23215.1| DNA mismatch repair protein msh-2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320034786|gb|EFW16729.1| DNA mismatch repair protein Msh2 [Coccidioides posadasii str.
Silveira]
Length = 941
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 261/741 (35%), Positives = 411/741 (55%), Gaps = 64/741 (8%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVT 143
T VGV D ++ + E D+D YSN E++++Q KECL+ + + KI +
Sbjct: 154 TRHVGVCFADASVRELGVSEFDDNDLYSNFESLVIQLGVKECLVTTDGQKKDVELAKIRS 213
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I D + ++ R ++F D+ QD++RL++ + + A LP+ L A +LI
Sbjct: 214 IADSCGIAISSRPASDFHTRDIDQDLSRLLKGE----RTAGTLPQTDLKLAMGAAAALIK 269
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL M++ N Q+ ++ D S+Y+ + SA + +L+++P G SL G+L+ C+
Sbjct: 270 YLGAMSDPSNFGQYQLYQHDLSQYMKLDSAALRALNLMP--GPRDGVKSMSLYGLLNHCK 327
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLLAQW+KQPL + + I +R V V++TE R + E LR +PD+ LA +
Sbjct: 328 TPVGGRLLAQWLKQPLMNHEDIEKRQQLVEAFVSDTELRQTMQEDHLRSIPDLYRLAKKF 387
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESL----------------VQNVEAS--NLNTI 365
R A L+D R+Y+ V +LP I+ LE++ ++N+ S L +
Sbjct: 388 QRNAATLEDVVRIYQVVIRLPGFINTLEAVMDEQYQEPLEEEYTSKIRNLSNSFGKLAEM 447
Query: 366 LSSLQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKL 406
+ + L+ +D + + +DK++ +++ RR LN +K + L
Sbjct: 448 VETTVDLEALDHHEFIIKPEFDESLRIIRKKLDKLRYDMDAEHRRVGRDLNQDTEKKLFL 507
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
E+ G+ +R+T I ++ Y T + GV F + + ++ + + Y
Sbjct: 508 EDHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQSLRREHDQLSQNYNRT 567
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+ ++A Y L QL+ VLA DV+VSF+ S AP PYVRP + P GTG+ +
Sbjct: 568 QTGLVNEVVNVAASYCPLLEQLAGVLAHLDVIVSFAHVSVHAPTPYVRPKVHPRGTGNTI 627
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GC
Sbjct: 628 LKEARHPCMEMQDDISFITNDVSLVRNESSFLIITGPNMGGKSTYIRQIGVVALMAQTGC 687
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 688 FVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKTATSESLIIIDELGRG 747
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL------E 696
TST+DGFG+A +I+ + + + F LFATHFHE+ L P + +N+ V A +
Sbjct: 748 TSTYDGFGLAWAISEHIITEIRCFGLFATHFHELTALEERYPNSVKNLHVVAFIGDNVSD 807
Query: 697 QEDN--------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK 748
+++N + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E T
Sbjct: 808 KQNNTASKKKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELE-DFTTA 866
Query: 749 TPSGDETNNREEEYFKTVQEG 769
G+ + + ++ + V EG
Sbjct: 867 AEKGENSMDIDKYSAEEVAEG 887
>gi|225679033|gb|EEH17317.1| DNA mismatch repair protein MSH2 [Paracoccidioides brasiliensis
Pb03]
Length = 941
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 267/738 (36%), Positives = 403/738 (54%), Gaps = 63/738 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+ AE + KI +ILD
Sbjct: 156 VGVCFADATVRELGVSEFVDNDLYSNFESLVIQLGVKECLVMAETQKKDVELGKIRSILD 215
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R +F +D+ QD+ RL+R E+ +LP+ L A +LI YL
Sbjct: 216 SCGIAISQRPIADFGTKDIEQDLARLLR---DEMAPG-ILPQTDLKLAMGSAAALIKYLG 271
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D S+Y+ + ++ + +L+++P G SL G+L+ C+TP
Sbjct: 272 AMSDASNFGQYQLYQHDLSQYMKLDASALRALNLMP--GPRDGAKNMSLYGLLNHCKTPV 329
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + I +R V V +TE R + E LR +PD+ LA R RK
Sbjct: 330 GSRLLAQWLKQPLMNHADIEKRQQLVEAFVVDTELRQTMQEDQLRSIPDLYRLAKRFLRK 389
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLV-----QNVEA-------------SNLNTILSS 368
A L+D RVY+ V +LP I+ LE+++ + +E S L ++ +
Sbjct: 390 MANLEDVVRVYQVVIRLPGFINTLEAVIDEQYQEPLETEYTSKLRSLSDNFSKLAEMVET 449
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L +D + + +DK+K ++ R LN DK + LEN
Sbjct: 450 TVDLDALDNHEFIIKPEFDDSLRIIREKLDKLKHDMDVEHRMVGKDLNQDTDKKLFLENH 509
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I ++ Y T + GV F + + ++ + Y Q
Sbjct: 510 RVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQSLRREHDQLSSNYNRTQAG 569
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V+EV+ ++A Y L QL+ VLA DV+VSF+ S AP YVRP + P GTG +L +
Sbjct: 570 LVQEVVNVAASYCPLLEQLASVLAHLDVIVSFAHVSVHAPSAYVRPKIHPRGTGHTILKE 629
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 630 ARHPCMEMQDDISFITNDVSLLRNESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 689
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 690 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 749
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQV------------- 692
+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V
Sbjct: 750 YDGFGLAWAISEHIITEIRCFALFATHFHELTALQDRYPKSVKNLHVVAFISDGKDAKRN 809
Query: 693 -SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
SA ++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E T +
Sbjct: 810 ESADRKKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSTAADN 869
Query: 752 GDETNNREEEYFKTVQEG 769
+ + +E + V EG
Sbjct: 870 QQQAASLDEYSTEEVAEG 887
>gi|449299727|gb|EMC95740.1| hypothetical protein BAUCODRAFT_501656 [Baudoinia compniacensis
UAMH 10762]
Length = 931
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 282/853 (33%), Positives = 430/853 (50%), Gaps = 123/853 (14%)
Query: 2 KFYLFFFPQKSKTTIRFFNRVEFYCVHGEDAELIQR-KSNVVYLVKTMG----------- 49
K YL K+ T+R F+R ++ HGEDA LI R + ++KT+G
Sbjct: 17 KAYLQLESAKNVDTVRIFDRGDWLSAHGEDAMLIARVQYKTTSVIKTLGRSPGLPSVTMT 76
Query: 50 ----------------QKDKTLETVLVNKSNL--------------SCFSHI------LC 73
++ + L+T N+ N+ HI L
Sbjct: 77 WTAYKSFLREAIFRLGKRVEVLQTTGRNQWNVIKQASPGNLQDIEEELGGHIDSAPIILA 136
Query: 74 VISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
V K E VGV D ++ + E D+D YSN E++++Q KECL+ ++
Sbjct: 137 VRVSAKATEA---RQVGVCFADASVRELGVSEFADNDIYSNFESLLIQLGVKECLIQSDG 193
Query: 134 LNDNK--NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCL 191
+ K+ TI D ++ R +++FS D+ QD+ RL+R + ++A LP+ L
Sbjct: 194 TKKDAELQKLRTIADNCGCAVSERPQSDFSNRDIEQDLTRLLR----DERSAGTLPQTDL 249
Query: 192 TTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--QQGSTSA 249
A +LI YL ++ + N Q+ ++ D S+Y+ + S+ + +L+++P + GS +
Sbjct: 250 KLAMTSAAALIKYLGVLTDATNFGQYQLYQHDLSQYMKLDSSALKALNLMPSPKDGSRTM 309
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
Y G+L+ C+TP G RLLAQW+KQPL LD I R V V++TE R L E
Sbjct: 310 NLY----GLLNHCKTPVGSRLLAQWLKQPLMSLDEIERRQQLVEAFVSDTELRQTLQEEH 365
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-------EASN- 361
LR +PD+ LA + RKKA L+D R Y+ +LP I E ++ E +N
Sbjct: 366 LRSIPDLYRLAKKFQRKKANLEDVVRAYQVAIRLPGFIGTFEGVMDEAYKDALDSEYTNK 425
Query: 362 ----------LNTILSSLQSLKMMDRKDAV---------------MDKMKEYLE----ST 392
L ++ + L +D + + +DK++ +E S
Sbjct: 426 LRSYTDSFGKLQEMVETTVDLDALDNHEFIIKSEFDDGLRIIRKKLDKLRYEMEKEHRSV 485
Query: 393 ARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATA 449
A LN +K + LEN G+ +R+T +I ++ Y T + GV F ++
Sbjct: 486 ADDLNQDPEKKLFLENHKVHGWCFRLTRTEAAAIRNKKQYQECSTQKNGVFFTTTKMTGY 545
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
+ + +Y Q +V+EV+ ++A Y + +L+ VLA DV+VSF+ S AP Y
Sbjct: 546 RRDFDQLSEQYNRTQSGLVQEVVNVAASYCPVIEKLAGVLAHLDVIVSFAHVSVHAPTAY 605
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
VRP + P GTGS +L + RHP +E+Q +S+I NDV G+ F ++TGPNMGGKSTYI
Sbjct: 606 VRPKIHPRGTGSTILKEARHPCMEMQDDISFITNDVSLVRGDSEFLIITGPNMGGKSTYI 665
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R IGV +AQIGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K
Sbjct: 666 RQIGVIALMAQIGCFVPCSEAELTLFDCILARVGASDSQLKGVSTFMAEMLETANILKTA 725
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T SLVIIDELGRGTST+DGFG+A +I+ + F +FATHFHE+ L +N
Sbjct: 726 TRESLVIIDELGRGTSTYDGFGLAWAISEHIIKEIGAFAMFATHFHELTALHDTYSQVQN 785
Query: 690 VQV--------------------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
+ V A + + LLY+V PG +S+G+H A++ +P+
Sbjct: 786 LHVVAHIGDGGSGDAAMTGTTDAPAAPRRQEVTLLYKVVPGISDQSFGIHVAELVRFPQK 845
Query: 730 MLEQARDLMKEYE 742
++ A+ E E
Sbjct: 846 VVNMAKRKADELE 858
>gi|453084349|gb|EMF12393.1| DNA mismatch repair protein MSH2 [Mycosphaerella populorum SO2202]
Length = 956
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 276/840 (32%), Positives = 425/840 (50%), Gaps = 114/840 (13%)
Query: 11 KSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVY------------------------ 43
K T+R F+R E+ HG+DAE I R K++ V
Sbjct: 26 KPTDTVRIFDRGEYLSAHGDDAEFIARVQYKTSAVLKTLGRSPGLPSVTMTITVFRTFLR 85
Query: 44 -LVKTMGQKDKTLE---------TVLVNKSNLSCFSHIL--------CVISEDKTLETVL 85
+ +G++ + LE T + NL L ++S + +
Sbjct: 86 EAIFRLGRRIEVLESSGRGQWAVTKQASPGNLQDIEDDLGGHVDSAPIILSVKVSAKANE 145
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVT 143
VGV D ++ + E D+D YSN E++I+Q KECL+ + + +K+ T
Sbjct: 146 ARNVGVCFADASVRELGISEFVDNDIYSNFESLIIQLGVKECLIQVDTTKKDAELHKLKT 205
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I D + R +F ++D+ QD+ R++R + K LP+ L A +LI
Sbjct: 206 IADNCNCAIAERPAGDFGKQDIEQDLTRILR----DEKAGGTLPQTDLKLAMGSAAALIK 261
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL +M++ N Q+ ++ D S+Y+ + S+ + +L+++P G SL G+L+ C+
Sbjct: 262 YLGIMSDPSNFGQYQLYQHDLSQYMKLDSSALKALNLMP--GPRDGSKTMSLYGLLNHCK 319
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLLAQW+KQPL L+ I +R V VN+TE R L E LR +PD+ LA +
Sbjct: 320 TPVGSRLLAQWLKQPLMSLEEIEKRQQLVEAFVNDTELRQTLQEDHLRSIPDLYRLAKKF 379
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSS-----------LQS- 371
RKKA L+D R Y+ +LP I E ++ L+ + ++ LQ
Sbjct: 380 QRKKANLEDVVRAYQVAIRLPDFIGTFEGVMDETYKDALDAVYTNKLRDHSDSFVKLQEM 439
Query: 372 ------LKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKL 406
L+ +D + + +DK++ ++ RR L + +K + L
Sbjct: 440 VETTVDLEALDNHEFIIKPEFDDTLRVIRKKLDKLRYDIDKEHRRAGDDLGMDTEKKLLL 499
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ +R+T I + Y + T + G F RL+ ++ + Y
Sbjct: 500 ENHRVHGWCFRLTRAEAAVIRGKKQYPEIATQKNGTYFTTPRLSEMRREFDQLSENYNRT 559
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V+EV+ ++A Y+ + QL+ VLA DV+VSF+ S AP YVRP M P GTGS +
Sbjct: 560 QSGLVQEVVNVAASYSPVIEQLAGVLAHLDVIVSFAHVSVHAPTAYVRPKMHPRGTGSTI 619
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q + +I NDV F ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 620 LKEARHPCMEMQDDIQFITNDVSLTRESSEFLIITGPNMGGKSTYIRQIGVIALMAQIGC 679
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T+ SLVIIDELGRG
Sbjct: 680 FVPCSEAELTLFDCILARVGASDSQLKGVSTFMAEMLETSNILKTATKESLVIIDELGRG 739
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN--- 700
TST+DGFG+A +I+ + + +T+FATHFHE+ L P +N+ V A + N
Sbjct: 740 TSTYDGFGLAWAISEHIITEIGAYTMFATHFHELTALVDTHPQVQNLHVVAHIENGNEEG 799
Query: 701 ------------------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ LLY+V PG +S+G+H A++ +P+ ++ A+ +E E
Sbjct: 800 GEDVHMTNSGNNNHRRREVTLLYKVVPGISDQSFGIHVAELVRFPQKVVNMAKRKAEELE 859
>gi|340966637|gb|EGS22144.1| DNA mismatch repair protein msh2-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 940
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 266/754 (35%), Positives = 404/754 (53%), Gaps = 71/754 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN-----KIV 142
TVGV D ++ + E D+D YSN E++++Q KECL+ + + +K K+
Sbjct: 150 TVGVCFADATARELGVSEFLDNDLYSNFESLLIQLGVKECLIQIDKADKDKKDPELAKLR 209
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
I+D + ++ R ++F+ +D+ QD+ RL++ + ++A +LP+ L A +LI
Sbjct: 210 QIIDSCNIAISERPSSDFATKDIEQDLARLLK----DERSATMLPQTDLKLAMGSAAALI 265
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
YL ++++ N QF ++ D ++++ + +A + +L+++P G SL G+L+ C
Sbjct: 266 KYLGVLHDPANFGQFRLYQHDLAQFMKLDAAALKALNLMP--GPRDGSKTMSLFGLLNHC 323
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
+TP G RLLAQW+KQPL D D I +R V N+TE R + E LR +PD+ LAMR
Sbjct: 324 KTPLGSRLLAQWLKQPLMDKDEIEKRQQLVEAFANDTELRQTMQEEHLRAVPDLYRLAMR 383
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-----------EASNLNTILSSLQ- 370
RKKA L+D RVY+ V +LP L+ LE ++ + L+ L+ Q
Sbjct: 384 FQRKKANLEDVVRVYQVVIRLPSLLGTLEGVMDEAYRDPLDEAYTNKLRELSDSLAKFQD 443
Query: 371 ------------------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIK 405
SL+++ ++ D + M+ AR L DK I
Sbjct: 444 MVETTVDLDALDNHEFIIKPEFDDSLRIIRKRLDKLRSDMEREFAEAARDLGQERDKKIF 503
Query: 406 LENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
LEN G+ R+T I ++ Y T + GV F L ++ + Y
Sbjct: 504 LENHKVHGWCMRLTRTEAGCIRNKPKYMECSTQKNGVYFTTKTLQAYRREFDQLNLNYNR 563
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q +V EV+ ++A Y L +L+ VLA DV+VSF+ + AP YVRP + P G G
Sbjct: 564 TQSGLVSEVVSVAASYVPVLERLAGVLAHLDVIVSFAHCAVHAPTSYVRPKIHPRGEGQT 623
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
+L + RHP +E+Q V +I NDV + SF ++TGPNMGGKSTYIR IGV +AQ+G
Sbjct: 624 ILKEARHPCLEVQDDVQFITNDVELTRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQVG 683
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGR
Sbjct: 684 SFVPCSYAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATRESLIIIDELGR 743
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA-------- 694
GTST+DGFG+A +I+ + F LFATHFHE+ L+ P RN+ V+A
Sbjct: 744 GTSTYDGFGLAWAISEHIVQEIGCFALFATHFHELTALADQHPQVRNLHVTAHISGTSTA 803
Query: 695 -------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
+ + + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E T
Sbjct: 804 NGSGPRKADTKREVTLLYKVEPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELE-DFTT 862
Query: 748 KTPSGDETN---NREEEYFKT-VQEGEYQMFDFL 777
G ++N E Y K V+EG + D L
Sbjct: 863 NHEEGADSNVGGVAAEGYSKQDVEEGSALLKDLL 896
>gi|259482119|tpe|CBF76294.1| TPA: DNA mismatch repair protein Msh2, putative (AFU_orthologue;
AFUA_3G09850) [Aspergillus nidulans FGSC A4]
Length = 945
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 263/716 (36%), Positives = 399/716 (55%), Gaps = 71/716 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN EA+++Q KECL+ + + KI I D
Sbjct: 159 VGVCFADASVRELGVSEFLDNDVYSNFEALVIQLGVKECLVVQDVNRKDVEVAKIRAICD 218
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R ++F +D+ QD+ RL+R + ++A LPE L A +LI YL
Sbjct: 219 NCGIAISERPASDFGVKDIEQDLTRLLR----DERSAGTLPETELKLAMGGAAALIRYLG 274
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+M++ N Q+ ++ D ++Y+ + +A + +L+++P G SL G+L+ C+TP
Sbjct: 275 VMSDATNFGQYQLYQHDLAQYMKLDAAALRALNLMP--GPRDGSKSMSLFGLLNHCKTPV 332
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL DL I +R V V +TE R + E LR +PD+ LA R RK
Sbjct: 333 GSRLLAQWLKQPLMDLAEIEKRQRLVEAFVVSTELRQMMQEEHLRSIPDLYRLAKRFQRK 392
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ-----------NVEASNLNTILSSLQ----- 370
+A L+D RVY+ +LP ++ LE+++ + N + L+ L+
Sbjct: 393 QANLEDVVRVYQVAIRLPGFVNSLENVMDEEYQTPLETEYTAKLRNHSASLAKLEEMVET 452
Query: 371 --------------------SLKMMDRKDAVMDKMKE--YLE--STARRLNLVADKTIKL 406
SL+++ +K +D+++ YLE + AR L+ DK + L
Sbjct: 453 TVDLDALENHEFIIKPEFDDSLRIIRKK---LDQLRHDMYLEHKAVARDLDQEMDKKLFL 509
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ +R+T I ++ Y T + GV F + + ++ + Y
Sbjct: 510 ENHRVYGWCFRLTRNEAGCIRNKKAYQECSTQKNGVYFTTSTMQSLRREHDQLSSNYNRT 569
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+ ++A Y L QL+ VLA DV+VSF+ AS AP Y +P + P GTG+ V
Sbjct: 570 QTGLVSEVVNVAASYCPVLEQLAGVLAHLDVIVSFAHASVHAPTAYTKPKIHPRGTGNTV 629
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 630 LKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRMIGVIALMAQIGC 689
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGRG
Sbjct: 690 FVPCTEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRG 749
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL------- 695
TST+DGFG+A +I+ + + + F LFATHFHE+ L+ P + +N+ V A
Sbjct: 750 TSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTTLADRYPKSVKNLHVVAFIGDGTTA 809
Query: 696 EQED---------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ED + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 810 NEEDEKEKRKTRQKVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELE 865
>gi|295659293|ref|XP_002790205.1| DNA mismatch repair protein msh-2 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281910|gb|EEH37476.1| DNA mismatch repair protein msh-2 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 941
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 288/855 (33%), Positives = 439/855 (51%), Gaps = 124/855 (14%)
Query: 3 FYLFF--FPQKS-KTTIRFFNRVEFYCVHGED----AELIQRKSNV-------------- 41
F FF P K +T+R F+R +FY HG D A + + ++V
Sbjct: 15 FIRFFRSLPAKDDSSTVRVFDRGDFYTAHGPDAEYIARTVYKTTSVLKSLGRSDTGGLPS 74
Query: 42 ------------------------VYLVKTMGQKDKTL-------------ETVLVNKSN 64
+++ + G+ + TL E + + +
Sbjct: 75 VTMTVTVFRNFLREALFRLSMRVEIWVSQGGGKANWTLAKQASPGNLQDVEEDLGASGAA 134
Query: 65 LSCFSHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSP 124
+ IL V K E L VGV D ++ + E D+D YSN E++++Q
Sbjct: 135 MDSSPIILAVKVSAKASEARL---VGVCFADASVRELGVSEFVDNDLYSNFESLVIQLGV 191
Query: 125 KECLLPAEYLNDNK--NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN 182
KECL+ AE + KI +ILD + ++ R +F +D+ QD+ RL+R E+
Sbjct: 192 KECLVIAETQKKDVELGKIRSILDSCGIAISQRPIADFGTKDIEQDLARLLR---DEMAP 248
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
+LP+ L A +LI YL M++ N Q+ ++ D S+Y+ + ++ + +L+++P
Sbjct: 249 G-ILPQTDLKLAMGSAAALIKYLGAMSDASNFGQYQLYQHDLSQYMKLDASALRALNLMP 307
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
G SL G+L+ C+TP G RLLAQW+KQPL + I +R V V +TE R
Sbjct: 308 --GPRDGAKNMSLYGLLNHCKTPVGSRLLAQWLKQPLMNHADIEKRQQLVEAFVVDTELR 365
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLV-----QNV 357
+ E LR +PD+ LA R RK A L+D RVY+ V +LP I+ LE+++ + +
Sbjct: 366 QTMQEDQLRSIPDLYRLAKRFLRKMANLEDVVRVYQVVIRLPGFINTLEAVIDEQYQEPL 425
Query: 358 EA-------------SNLNTILSSLQSLKMMDRKDAV---------------MDKMKEYL 389
E S L ++ + L +D + + +D++K +
Sbjct: 426 ETEYTSKLRSLSDNFSKLAEMVETTVDLDALDNHEFIIKPEFDDSLRIIRKKLDELKHDM 485
Query: 390 ESTARR----LNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQ 442
+ R LN DK + LEN G+ +R+T I ++ Y T + GV F
Sbjct: 486 DVEHRMVGKDLNQDTDKKLFLENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFT 545
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+ + ++ + Y Q +V+EV+ ++A Y L QL+ VLA DV+VSF+ S
Sbjct: 546 TSTMQSLRREHDQLSSNYNRTQAGLVQEVVNVAASYCPLLEQLASVLAHLDVIVSFAHVS 605
Query: 503 TCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNM 562
AP YVRP + P GTG+ +L + RHP +E+Q +S+I NDV E SF ++TGPNM
Sbjct: 606 VHAPSAYVRPKIHPRGTGNTILKEARHPCMEMQDDISFITNDVSLLRNESSFLIITGPNM 665
Query: 563 GGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKET 622
GGKSTYIR IGV +AQ GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ET
Sbjct: 666 GGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLET 725
Query: 623 ATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLS 681
A ++K T SL+IIDELGRGTST+DGFG+A +I+ + + + F LFATHFHE+ AL
Sbjct: 726 ANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIITEIRCFALFATHFHELTALQD 785
Query: 682 RVIPTFRNVQVSAL-------EQEDN-------LVLLYQVKPGSCVKSYGVHCAKMAGYP 727
R + +N+ V A +Q D+ + LLY+V+PG C +S+G+H A++ +P
Sbjct: 786 RYPKSVKNLHVVAFISDGKDAKQNDSADRKKREVTLLYRVEPGVCDQSFGIHVAELVRFP 845
Query: 728 EDMLEQARDLMKEYE 742
E ++ AR +E E
Sbjct: 846 EKVVNMARQKAEELE 860
>gi|328851311|gb|EGG00467.1| hypothetical protein MELLADRAFT_118031 [Melampsora larici-populina
98AG31]
Length = 963
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 263/735 (35%), Positives = 407/735 (55%), Gaps = 67/735 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPD-DDYYSNLEAIIVQKSPKECLLPAEYLNDNKN-----KI 141
TVGVA D+ + + E P+ DD ++N E++++Q KE +LP + + ++
Sbjct: 168 TVGVAFADMSIRTIGLSEFPEKDDGWANTESLVIQLGIKEAILPTTTTGKSGDTGEYGQV 227
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
+L+R V +T R + EF+ + + QDVNRL+ + + LP+ + TA L L
Sbjct: 228 RDMLERCGVVVTERPRAEFNIKSIEQDVNRLLEGE----RQLAALPQFDMKTALAALNPL 283
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-QGSTSAQTYDSLLGILD 260
+NYL ++++ N + F + D +Y+ + ++ + +LH+ P G SL G+L+
Sbjct: 284 LNYLSILDDPSNHSTFKFVTHDLGQYMRLDASAVRALHLFPNPTGIGGGGKSMSLFGMLN 343
Query: 261 RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLA 320
RC+T QG RLL +W+KQPL +L I +R VNIL ++ R L E L+ +PD+ ++
Sbjct: 344 RCKTSQGTRLLGRWLKQPLVNLHEIEQRQMLVNILFHDGLLRQQLQEDHLKAMPDLTRIS 403
Query: 321 MRIGRKKAGLKDCYRVYEGVSQLPKLISILES---------------------------- 352
R + A L+D RVY+ + LP ++ LE
Sbjct: 404 KRFTQGAASLEDVVRVYQAIIILPDILKALEKAEGPTDTDCAAEKRLMNEIYCVPLEECI 463
Query: 353 --LVQNVEASNLNTILSSLQSLKMMDRK--DAVMDKMKEYLESTARRL----NLVAD--- 401
L Q VE L L + + + + D + ++K LE +L N VAD
Sbjct: 464 TDLAQYVEMVETTVDLEELSNHRFIIKPEFDDELRELKTGLEQNRDQLDEEHNRVADDLG 523
Query: 402 -----KTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQY 453
KT+ EN G+ +R+T K + +I + Y L G F L N
Sbjct: 524 MGMDSKTLHFENHQVYGYVFRLTRKESGAIRAKKNYIELSNRNNGCHFTTKLLKELNNDL 583
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPC 513
+ + ++Y+ Q S+V+EV+ I+A Y L +L++++A D++VSF+ S AP Y RP
Sbjct: 584 KELTQKYQKKQNSLVKEVVKIAASYCPILEKLNEIIAHLDLIVSFAHVSLHAPITYTRPK 643
Query: 514 MKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
+ P+G G + L +CRHP +E+Q +++IPND + + SF+++TGPNMGGKSTYIR IG
Sbjct: 644 VFPLGEGDVSLKECRHPCLEVQEDINFIPNDTIMERNQSSFHIITGPNMGGKSTYIRQIG 703
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
V +AQ+GC+VPC A++ + D I RVGA DSQ +GISTFM EM ETA ++K T+NS
Sbjct: 704 VVALMAQLGCYVPCSEASLPIFDSILARVGAGDSQTKGISTFMAEMLETAVILKSATKNS 763
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVS 693
L+IIDELGRGTST+DGFG+A +I+ +A FTLFATHFHE+ L + + +N V
Sbjct: 764 LIIIDELGRGTSTYDGFGLAWAISEHIAVEIGAFTLFATHFHELTSLDQQVEHVKNYHVV 823
Query: 694 A-------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
A E + LLY+V+ G +S+G+H A+M+ +PE++L+ AR +E E D
Sbjct: 824 AHVETSKTKESIQEITLLYKVEKGFSDQSFGIHVAEMSEFPEEVLKLARRKAEELE-QFD 882
Query: 747 TKTPSGDETNNREEE 761
KT + ET+ +EEE
Sbjct: 883 KKTVT-KETSIKEEE 896
>gi|194389128|dbj|BAG61581.1| unnamed protein product [Homo sapiens]
Length = 720
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 258/677 (38%), Positives = 376/677 (55%), Gaps = 100/677 (14%)
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
K+ I+ R + +T RKK +FS +D+ QD+NRL++ E
Sbjct: 48 KLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGE-------------------- 87
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT-YDSLLGI 258
M+SAV+ + QGS T SL +
Sbjct: 88 -----------------------------QMNSAVLPEME---NQGSVEDTTGSQSLAAL 115
Query: 259 LDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQS 318
L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L E LR PD+
Sbjct: 116 LNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNR 175
Query: 319 LAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTILSSLQS 371
LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V + L + S
Sbjct: 176 LAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSK 235
Query: 372 LKMMDRKDAVMD-----------------------------KMKEYLESTARRLNLVADK 402
+ M MD KM+ L S AR L L K
Sbjct: 236 FQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGK 295
Query: 403 TIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQRE 459
IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L + N +Y + E
Sbjct: 296 QIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTE 355
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
YE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP PYVRP + G
Sbjct: 356 YEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQ 415
Query: 520 GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKSTYIR GV V +A
Sbjct: 416 GRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMA 475
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
QIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+IIDE
Sbjct: 476 QIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDE 535
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT N+ V+AL E+
Sbjct: 536 LGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEE 595
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY-----SLDTKTPS 751
L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y D P+
Sbjct: 596 TLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPA 655
Query: 752 GDETNNREEEYFKTVQE 768
+ E+ K +QE
Sbjct: 656 AKKCYLEREQGEKIIQE 672
>gi|119195125|ref|XP_001248166.1| hypothetical protein CIMG_01937 [Coccidioides immitis RS]
gi|392862590|gb|EAS36755.2| DNA mismatch repair protein msh-2 [Coccidioides immitis RS]
Length = 941
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/741 (35%), Positives = 409/741 (55%), Gaps = 64/741 (8%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVT 143
T VGV D ++ + E D+D YSN E++++Q KECL+ + + KI +
Sbjct: 154 TRHVGVCFADASVRELGVSEFDDNDLYSNFESLVIQLGVKECLVTTDGQKKDVELAKIRS 213
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I D + ++ R ++F D+ QD++RL++ + + A LP+ L A +LI
Sbjct: 214 IADSCGIAISSRPASDFHTRDIDQDLSRLLK----DERTAGTLPQTDLKLAMGAAAALIK 269
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL M++ N Q+ ++ D S+Y+ + SA + +L+++P G SL G+L+ C+
Sbjct: 270 YLGAMSDPSNFGQYQLYQHDLSQYMKLDSAALRALNLMP--GPRDGVKSMSLYGLLNHCK 327
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLLAQW+KQPL + + I +R V V++TE R + E LR +PD+ LA +
Sbjct: 328 TPVGGRLLAQWLKQPLMNHEDIEKRQQLVEAFVSDTELRQTMQEDHLRSIPDLYRLAKKF 387
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESL----------------VQNVEAS--NLNTI 365
R A L+D R+Y+ V +LP I+ LE++ ++N+ S L +
Sbjct: 388 QRNAATLEDVVRIYQVVIRLPGFINTLEAVMDEQYQEPLEEEYTSKIRNLSNSFGKLAEM 447
Query: 366 LSSLQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKL 406
+ + L+ +D + + +DK++ + + RR LN +K + L
Sbjct: 448 VETTVDLEALDHHEFIIKPEFDESLRIIRKKLDKLRYDMHAEHRRVGRDLNQDTEKKLFL 507
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
E+ G+ +R+T I ++ Y T + GV F + + ++ + + Y
Sbjct: 508 EDHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQSLRREHDQLSQNYNRT 567
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+ ++ Y L QL+ VLA DV+VSF+ S AP PYVRP + P GTG+ +
Sbjct: 568 QTGLVNEVVNVATSYCPLLEQLAGVLAHLDVIVSFAHVSVHAPTPYVRPKVHPRGTGNTI 627
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GC
Sbjct: 628 LKEARHPCMEMQDDISFITNDVSLVRNESSFLIITGPNMGGKSTYIRQIGVVALMAQTGC 687
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 688 FVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKTATSESLIIIDELGRG 747
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL------E 696
TST+DGFG+A +I+ + + + F LFATHFHE+ L P + +N+ V A +
Sbjct: 748 TSTYDGFGLAWAISEHIITEIRCFGLFATHFHELTALEERYPNSVKNLHVVAFIGDNVSD 807
Query: 697 QEDN--------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK 748
+++N + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E T
Sbjct: 808 KQNNTASKKKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELE-DFTTA 866
Query: 749 TPSGDETNNREEEYFKTVQEG 769
G+ + + ++ + V EG
Sbjct: 867 AEKGENSMDIDKYSAEEVAEG 887
>gi|389740898|gb|EIM82088.1| DNA mismatch repair protein [Stereum hirsutum FP-91666 SS1]
Length = 973
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 268/747 (35%), Positives = 414/747 (55%), Gaps = 68/747 (9%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN------ 139
+ TVG+A D ++ + + D+D +SN E ++VQ KE L+ + +
Sbjct: 170 SKTVGIAFADSSVRQLGVSDFVDNDLFSNTETLVVQLGVKEALVTTGTASGTTDRDFDLR 229
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDD---SELKNARL-LPEMCLTTAT 195
K+ +LDR V +T RK +EF+ +++ +D+ RL+ D S +A +P++ L TA
Sbjct: 230 KLKEVLDRCGVVITERKPSEFTAKNIQEDLTRLLTKPDAVPSATGDASSSIPQLSLPTAP 289
Query: 196 HCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
L +L+ YL L+ + N ++I++ D +Y+ + ++ + +L+++ +G+ + T +L
Sbjct: 290 AALTALLTYLNLLADTSNHGAWTIYTHDLGQYMRLDASALRALNLV--EGTATRNT--TL 345
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
LG+L++C+T QG R+L W+KQPL + I++R V V++ AR L + ++ +PD
Sbjct: 346 LGLLNKCKTAQGTRMLGSWLKQPLVNRHEILKRQDLVETFVDDLNARRTLQDDFMKLMPD 405
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES----------LVQNV-------E 358
M + R + A L+D RVY+ V +L LI L++ L+Q
Sbjct: 406 MHRICKRFQKSVASLEDVVRVYQAVLKLSGLIENLKAVDYKSDRSRDLIQETYLEHFEKH 465
Query: 359 ASNLNTI---------LSSLQSLKMMDRKD------AVMDKMKEYLES-------TARRL 396
A++L+ LS L+ K + + D + +KE LE R L
Sbjct: 466 ATSLSNYADMVEQTLDLSQLEQHKYVIKPDYDQKLMNIASALKEALEGLDREHKEVGRDL 525
Query: 397 NLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQY 453
L DK ++LEN+ G+ +R+T +I+ + Y L TV+ GV F L T Y
Sbjct: 526 GLELDKKLRLENTQTYGYCFRLTKNDARAINGKRKYIELGTVKAGVHFTTATLKEHATDY 585
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPC 513
Q Y Q S+V+EV+ I+A Y L L+ VLA DV++SF+ + AP+ YV+P
Sbjct: 586 QESTERYSRTQSSLVKEVVSIAATYAPVLEALNGVLAHLDVILSFAQVAANAPEAYVKPT 645
Query: 514 MKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS-I 572
+ MGTG L+L + RHP +E+Q +S+IPNDV E F ++TGPNMGGKSTYIR I
Sbjct: 646 IVDMGTGDLILKEARHPCLEVQDDMSFIPNDVEMIKNESEFQIITGPNMGGKSTYIRQVI 705
Query: 573 GVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
GV +AQ G FVPC A I + D I RVGA DSQ +GISTFM EM ETAT++K +++
Sbjct: 706 GVIALMAQTGSFVPCSEAQIPIFDSILCRVGAGDSQLKGISTFMAEMLETATILKSASKD 765
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV 692
SL+IIDELGRGTST+DGFG+A +I+ +AS F LFATHFHE+ L + + +N+ V
Sbjct: 766 SLIIIDELGRGTSTYDGFGLAWAISEHIASQIHAFCLFATHFHELTALDQELSHVKNLHV 825
Query: 693 SA---------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE- 742
A +E ++ LLY+V+PG C +S+G+H A++A +PE ++ A+ E E
Sbjct: 826 VAHVSKADETSKSKERDITLLYKVEPGVCDQSFGIHVAELANFPESVVRLAKRKADELED 885
Query: 743 -YSLDTKTPSGDETNNREEEYFKTVQE 768
+ D D EE K V+E
Sbjct: 886 FNTDDASNSEADLPPEVTEEGIKIVEE 912
>gi|121705444|ref|XP_001270985.1| DNA mismatch repair protein Msh2, putative [Aspergillus clavatus
NRRL 1]
gi|119399131|gb|EAW09559.1| DNA mismatch repair protein Msh2, putative [Aspergillus clavatus
NRRL 1]
Length = 940
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/718 (36%), Positives = 398/718 (55%), Gaps = 75/718 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN-----KIV 142
+VGV D ++ + E D+D YSN E++++Q KECL+ ++ N+ KI
Sbjct: 156 SVGVCFADASVRELGVSEFLDNDVYSNFESLVIQLGVKECLVQ---MDSNRKDAELAKIR 212
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
I D + ++ R +F +D+ QD+ RL+R + ++A LP+ L A +LI
Sbjct: 213 AIADNCGIAVSERPVADFGVKDIEQDLTRLLR----DERSAGTLPQTELKLAMGSASALI 268
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
YL +M++ N Q+ ++ D S+++ + ++ + +L+++P G SL G+L+ C
Sbjct: 269 KYLGVMSDPSNFGQYQLYQHDLSQFMKLDASALRALNLMP--GPRDGSRTMSLFGLLNHC 326
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
+TP G RLLAQW+KQPL DL I +R V V NTE R + E LR +PD+ L+ R
Sbjct: 327 KTPVGSRLLAQWLKQPLMDLTEIEKRQQLVEAFVTNTELRQTMQEEHLRSIPDLYRLSKR 386
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILESLVQN-----VEAS------NLNTILSSLQ- 370
RK+A L+D RVY+ +LP ++ LE+++ +EA N + L+ L+
Sbjct: 387 FQRKQANLEDVVRVYQVAIRLPGFVNSLENVMDEQYQTPLEAEYTSKLRNYSDSLAKLEE 446
Query: 371 ------------------------SLKMMDRKDAVMDKMKEYLE----STARRLNLVADK 402
SL+++ +K +DK++ ++ AR L+ DK
Sbjct: 447 MVETTVDLAALENHEFIIKPEFDDSLRIIRKK---LDKLRHDMDVEHRRVARDLDQEVDK 503
Query: 403 TIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQRE 459
+ LEN G+ +R+T I ++ Y T + GV F + ++ +
Sbjct: 504 KLFLENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSSN 563
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
Y Q +V EV+ ++A Y L QL+ VLA DV+VSF+ AS AP YVRP M GT
Sbjct: 564 YNRTQTGLVNEVVNVAASYCPVLEQLAGVLAHLDVIVSFAHASVHAPTAYVRPKMHLRGT 623
Query: 520 GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
G+ +L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +A
Sbjct: 624 GNTILKEARHPCMEMQDDISFITNDVSLIRDESSFLVITGPNMGGKSTYIRQIGVIALMA 683
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDE
Sbjct: 684 QTGCFVPCTEAEMTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDE 743
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL--- 695
LGRGTST+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 744 LGRGTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKSVKNLHVVAFIGD 803
Query: 696 -----------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 804 GADSNADTKANSKKAQVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARKKAEELE 861
>gi|67537672|ref|XP_662610.1| hypothetical protein AN5006.2 [Aspergillus nidulans FGSC A4]
gi|40741894|gb|EAA61084.1| hypothetical protein AN5006.2 [Aspergillus nidulans FGSC A4]
Length = 1644
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 263/716 (36%), Positives = 399/716 (55%), Gaps = 71/716 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN EA+++Q KECL+ + + KI I D
Sbjct: 159 VGVCFADASVRELGVSEFLDNDVYSNFEALVIQLGVKECLVVQDVNRKDVEVAKIRAICD 218
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R ++F +D+ QD+ RL+R + ++A LPE L A +LI YL
Sbjct: 219 NCGIAISERPASDFGVKDIEQDLTRLLR----DERSAGTLPETELKLAMGGAAALIRYLG 274
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+M++ N Q+ ++ D ++Y+ + +A + +L+++P G SL G+L+ C+TP
Sbjct: 275 VMSDATNFGQYQLYQHDLAQYMKLDAAALRALNLMP--GPRDGSKSMSLFGLLNHCKTPV 332
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL DL I +R V V +TE R + E LR +PD+ LA R RK
Sbjct: 333 GSRLLAQWLKQPLMDLAEIEKRQRLVEAFVVSTELRQMMQEEHLRSIPDLYRLAKRFQRK 392
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ-----------NVEASNLNTILSSLQ----- 370
+A L+D RVY+ +LP ++ LE+++ + N + L+ L+
Sbjct: 393 QANLEDVVRVYQVAIRLPGFVNSLENVMDEEYQTPLETEYTAKLRNHSASLAKLEEMVET 452
Query: 371 --------------------SLKMMDRKDAVMDKMKE--YLE--STARRLNLVADKTIKL 406
SL+++ +K +D+++ YLE + AR L+ DK + L
Sbjct: 453 TVDLDALENHEFIIKPEFDDSLRIIRKK---LDQLRHDMYLEHKAVARDLDQEMDKKLFL 509
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ +R+T I ++ Y T + GV F + + ++ + Y
Sbjct: 510 ENHRVYGWCFRLTRNEAGCIRNKKAYQECSTQKNGVYFTTSTMQSLRREHDQLSSNYNRT 569
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+ ++A Y L QL+ VLA DV+VSF+ AS AP Y +P + P GTG+ V
Sbjct: 570 QTGLVSEVVNVAASYCPVLEQLAGVLAHLDVIVSFAHASVHAPTAYTKPKIHPRGTGNTV 629
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 630 LKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRMIGVIALMAQIGC 689
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGRG
Sbjct: 690 FVPCTEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRG 749
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL------- 695
TST+DGFG+A +I+ + + + F LFATHFHE+ L+ P + +N+ V A
Sbjct: 750 TSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTTLADRYPKSVKNLHVVAFIGDGTTA 809
Query: 696 EQED---------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ED + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 810 NEEDEKEKRKTRQKVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELE 865
>gi|226288050|gb|EEH43563.1| DNA mismatch repair protein msh-2 [Paracoccidioides brasiliensis
Pb18]
Length = 941
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 266/738 (36%), Positives = 402/738 (54%), Gaps = 63/738 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+ AE + KI +ILD
Sbjct: 156 VGVCFADATVRELGVSEFVDNDLYSNFESLVIQLGVKECLVMAETQKKDVELGKIRSILD 215
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R +F +D+ QD+ RL+R E+ +LP+ L A +LI YL
Sbjct: 216 SCGIAISQRPIADFGTKDIEQDLARLLR---DEMAPG-ILPQTDLKLAMGSAAALIKYLG 271
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D S+Y+ + ++ + +L+++P G SL G+L+ C+TP
Sbjct: 272 AMSDASNFGQYQLYQHDLSQYMKLDASALRALNLMP--GPRDGAKNMSLYGLLNHCKTPV 329
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + I +R V V +T R + E LR +PD+ LA R RK
Sbjct: 330 GSRLLAQWLKQPLMNHADIEKRQQLVEAFVVDTGLRQTMQEDQLRSIPDLYRLAKRFLRK 389
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLV-----QNVEA-------------SNLNTILSS 368
A L+D RVY+ V +LP I+ LE+++ + +E S L ++ +
Sbjct: 390 MANLEDVVRVYQVVIRLPGFINTLEAVIDEQYQEPLETEYTSKLRSLSDNFSKLAEMVET 449
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L +D + + +DK+K ++ R LN DK + LEN
Sbjct: 450 TVDLDALDNHEFIIKPEFDDSLRIIREKLDKLKHDMDVEHRMVGKDLNQDTDKKLFLENH 509
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I ++ Y T + GV F + + ++ + Y Q
Sbjct: 510 RVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQSLRREHDQLSSNYNRTQAG 569
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V+EV+ ++A Y L QL+ VLA DV+VSF+ S AP YVRP + P GTG +L +
Sbjct: 570 LVQEVVNVAASYCPLLEQLASVLAHLDVIVSFAHVSVHAPSAYVRPKIHPRGTGHTILKE 629
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 630 ARHPCMEMQDDISFITNDVSLLRNESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 689
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 690 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 749
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQV------------- 692
+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V
Sbjct: 750 YDGFGLAWAISEHIITEIRCFALFATHFHELTALQDRYPKSVKNLHVVAFISDGKDAKRN 809
Query: 693 -SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
SA ++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E T +
Sbjct: 810 ESADRKKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSTAADN 869
Query: 752 GDETNNREEEYFKTVQEG 769
+ + +E + V EG
Sbjct: 870 QQQAASLDEYSTEEVAEG 887
>gi|425768288|gb|EKV06815.1| DNA mismatch repair protein Msh2, putative [Penicillium digitatum
Pd1]
gi|425770369|gb|EKV08842.1| DNA mismatch repair protein Msh2, putative [Penicillium digitatum
PHI26]
Length = 943
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 262/725 (36%), Positives = 394/725 (54%), Gaps = 70/725 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+ + + KI I D
Sbjct: 157 VGVCFADASVRELGVSEFLDNDIYSNFESLVIQLGVKECLVTMDVARKDVELAKIRAIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R +F +D+ QD+ RL+R + ++A LP+ L A +LI YL
Sbjct: 217 SCGIAISERPVADFGVKDIEQDLTRLLR----DERSAGTLPQTELKLAMGSASALIKYLN 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
++ + N Q+ ++ D S+Y+ + ++ + +L+++P G SL G+L+ C+TP
Sbjct: 273 VLTDPTNFGQYQLYQHDLSQYMKLDASALRALNLMP--GPRDGAKSMSLFGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL DL AI +R V V NTE R + E LR +PD+ LA R RK
Sbjct: 331 GSRLLAQWLKQPLMDLAAIEQRQQLVEAFVVNTELRQTMQEEHLRSIPDLYRLAKRFQRK 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISIL------------------------ESLVQNVEASNL 362
+A L+D R Y+ +LP +S L +SL E
Sbjct: 391 QANLEDVVRAYQVAIRLPGFVSALGDVMDEQYQTPLETEYTSKLRGFSDSLAMLEEMVET 450
Query: 363 NTILSSLQS------------LKMMDRKDAVMDKMKEYLESTARR----LNLVADKTIKL 406
L++L++ L+++ +K +DK++ ++ RR LN +K + +
Sbjct: 451 TVDLAALENHEFIIKPEFDDGLRVIRKK---LDKVRYDMDMEHRRVSKNLNQDIEKKLFM 507
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ +R+T I ++ Y T + GV F L + ++ + Y
Sbjct: 508 ENHRVHGWCFRLTRNEAGCIRNKKEYQECSTQKNGVYFTTSNLQSLRREHDQLSSNYNRT 567
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+ ++A Y L QL+ VLA DV+VSF+ AS AP YVRP M P GTG+ V
Sbjct: 568 QTGLVNEVVNVAASYCPVLEQLAGVLAHLDVIVSFAHASMHAPSGYVRPKMHPRGTGNTV 627
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GC
Sbjct: 628 LKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGC 687
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGRG
Sbjct: 688 FVPCTEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRG 747
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL------- 695
TST+DGFG+A +I+ + + + F LFATHFHE+ AL R +N+ V A
Sbjct: 748 TSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYQKAVKNLHVVAFIGNGNES 807
Query: 696 --------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ AR +E E
Sbjct: 808 DSEAETKEKKKRQVTLLYRVEPGICDQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSA 867
Query: 748 KTPSG 752
T G
Sbjct: 868 TTEDG 872
>gi|396474309|ref|XP_003839541.1| similar to DNA mismatch repair protein msh-2 [Leptosphaeria
maculans JN3]
gi|312216110|emb|CBX96062.1| similar to DNA mismatch repair protein msh-2 [Leptosphaeria
maculans JN3]
Length = 922
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 284/866 (32%), Positives = 434/866 (50%), Gaps = 121/866 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKSNVVY----LVKTMGQKD---- 52
F FF P+K TIR F+R ++Y HG DA I +N VY +++ +G++
Sbjct: 15 FCKFFRNLPEKDTDTIRIFDRGDYYSAHGGDAVFI---ANTVYKTTAVIRRLGREPGLES 71
Query: 53 ------------------------------KTLETVLVNKS---NLSCFSH--------- 70
K ++ ++V ++ NL
Sbjct: 72 VTMTVTVFRSFLRDALFRLSKRIEIWQSSAKRMDWIMVKQASPGNLQDLEDDLGGQIENA 131
Query: 71 --ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL 128
IL V KT E VG+ D ++ + E D+D YSN E++++Q KECL
Sbjct: 132 PIILAVKVSTKTSEA---RNVGICFADASVRELGVTEFLDNDLYSNFESLLIQLGVKECL 188
Query: 129 LPAEYLNDNK--NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
+ + + +K+ TI D + R +F +D+ QD+ RL++ + + L
Sbjct: 189 IQIDTSKKDVELSKLRTIADNCGCAVAERSPADFGTKDIEQDLPRLLK----DERAVTTL 244
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
P L A LI YL +M++ N Q+ ++ D ++Y+ + +A + +L+++P G
Sbjct: 245 PSTDLKLAMGAAACLIKYLGVMSDSSNFGQYQLYQHDLTQYMKLDAAALKALNLMP--GP 302
Query: 247 TSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLH 306
SL G+L+ C+TP G RLL+QW+KQPL ++ I R V V +TE R +
Sbjct: 303 RDGAKNMSLYGLLNHCKTPTGSRLLSQWLKQPLMNVKDIERRQQLVEAFVEDTELRQTMQ 362
Query: 307 EYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------- 352
E LR +PD+ LA + RK A L+D R Y+ V +LP +S LE+
Sbjct: 363 EEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVVIRLPGFLSSLEAVMDEKYKEPLDAEY 422
Query: 353 ---LVQNVEA-SNLNTILSSLQSLKMMDRKDAV---------------MDKMKEYLES-- 391
L Q A + L ++ + L+ +D + + +D++K +ES
Sbjct: 423 IDKLRQYANAFAGLQNMVETTVDLEALDNHEFIIKPEYDEALKTIRKRLDRLKRDMESEH 482
Query: 392 --TARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRL 446
L+ +K + LEN Q G+ +R+T I + Y + T + GV F RL
Sbjct: 483 MNVGNDLDQDTEKKLFLENHKQHGWCFRLTRNEAGCIRQKKQYKEISTQKNGVYFTTSRL 542
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ + Y Q +V EV+ +++ Y L +L+ VLA DV+VSF+ S AP
Sbjct: 543 QEKRREFDQLSDTYNRTQTGLVNEVVSVASSYVPVLEKLAAVLAHLDVIVSFAHVSVHAP 602
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
Y RP M P GTG+ +L + RHP +E+Q VS+I NDV E F ++TGPNMGGKS
Sbjct: 603 TSYTRPRMHPRGTGNTILKEARHPCLEMQDDVSFITNDVALVRDESEFLIITGPNMGGKS 662
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR IGV +AQIGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++
Sbjct: 663 TYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQIKGVSTFMAEMLETANIL 722
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
K T SL+IIDELGRGTST+DGFG+A +I+ + F LFATHFHE+ L P
Sbjct: 723 KSATRESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAFALFATHFHELTALVDSYPQ 782
Query: 687 FRNVQV------------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
+N+ V S + ++ + LLY+V+PG +S+G+H A++ +P+ ++ A
Sbjct: 783 VQNLHVVAHISEGTVEEGSEIHKKREVTLLYKVEPGFSDQSFGIHVAELVRFPQKVINMA 842
Query: 735 RDLMKEYEYSLDTKTPSGDETNNREE 760
+ E E K G E +R+E
Sbjct: 843 KRKADELE-DFAGKHEEGFEQASRDE 867
>gi|356563103|ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
Length = 942
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 286/865 (33%), Positives = 460/865 (53%), Gaps = 120/865 (13%)
Query: 4 YLFFF---PQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
+L FF P + +RFF+R ++Y HGE+A I + + ++ +G L +V
Sbjct: 25 FLSFFKTLPDDPRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTAMRQLGSGSNALSSVS 83
Query: 60 VNKSNLSCFSHILCVISEDKTLE-------------------------TVLTN------- 87
V+++ + L + D TLE + N
Sbjct: 84 VSRNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNIGSFEDVLFANSEMQDSP 143
Query: 88 --------------TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
T+G+ VDL + M E DD +++N+E+ V KEC+LP E
Sbjct: 144 VVVALSLNYRENGCTIGLGFVDLTKRVLGMAEFLDDSHFTNVESAFVALGCKECILPIES 203
Query: 134 LNDNKNKIVT-ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+N+++ +L + V +T +KK+EF DL+QD+ RLV+ ++ R L
Sbjct: 204 GKSTENRMLCDVLTKCGVMLTEKKKSEFKTRDLVQDLGRLVK---GPIEPVRDLVS-GFE 259
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A L +L++Y EL+ +E N +++ S + Y+ + SA M +L+VL + T A
Sbjct: 260 FAPGALGALLSYAELLADESNYENYTLRSYNLDSYMRLDSAAMRALNVL--ESKTDANKN 317
Query: 253 DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+++R C G RLL W+KQPL D+ I R V V +T R +L ++ L+
Sbjct: 318 FSLFGLMNRTCTAGMGKRLLHVWLKQPLVDVKEINSRLDIVQAFVEDTALRQDLRQH-LK 376
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------SLVQN-------- 356
+ D++ L I +++AGL+ ++Y+ +LP + S LE +++++
Sbjct: 377 RISDIERLMHNIQKRRAGLQHIVKLYQSSIRLPYIKSALERYDGQFSTMMRSRYLEPIEL 436
Query: 357 -VEASNLNTILSSLQSLKMMDR-----------KDAVMDKMK---EYLES--------TA 393
+ +LN + +++ +D+ D+++ +K E LES TA
Sbjct: 437 WTDDEHLNKFIGLVEASVDLDQLENREYMISPSYDSILANLKDQQELLESQIQNLHRQTA 496
Query: 394 RRLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLAT 448
L+L DK +KL+ Q G +RIT K + ++ ++ IL+T + GV+F + +L
Sbjct: 497 DDLDLPMDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIILETRKDGVKFTNTKLKK 556
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFS-IASTCAPK 507
QYQ I EY++ Q+ +V+ V+ +A +++ L++++++ DVL+SF+ +AS+C P
Sbjct: 557 LGDQYQQILEEYKSCQKKLVDRVVQTAATFSEVFESLAEIISELDVLLSFADLASSC-PT 615
Query: 508 PYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
PY RP + G + L CRHP VE Q V++IPND G+ F ++TGPNMGGKST
Sbjct: 616 PYTRPDITSSDEGDITLEGCRHPCVEAQDWVNFIPNDCKLVRGKTWFQIITGPNMGGKST 675
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
+IR +GV++ +AQ+G FVPCD+A+ISV D IF RVGA D Q RG+STFM EM ETA+++K
Sbjct: 676 FIRQVGVNILMAQVGSFVPCDNASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILK 735
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS------ 681
T+ SL+IIDELGRGTST+DGFG+A +I + + TLFATHFHE+ L+
Sbjct: 736 GATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALALENVSN 795
Query: 682 ---RVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ I N VSA L +LY+V+PG+C +S+G+H A+ A +PE ++ AR+
Sbjct: 796 DSQKQIVGVANYHVSAHIDSSTRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 855
Query: 737 LMKEYEYSLDTKTPSGDETNNREEE 761
E L+ +PS N+ +E
Sbjct: 856 KAAE----LEDFSPSATSLNHTTQE 876
>gi|378732144|gb|EHY58603.1| DNA mismatch repair protein msh-2 [Exophiala dermatitidis
NIH/UT8656]
Length = 932
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 258/728 (35%), Positives = 397/728 (54%), Gaps = 66/728 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTIL 145
+VGV D ++ + E D+D +SN E++++Q KEC++P E + K+ I+
Sbjct: 154 SVGVCFADASVRELGVSEFLDNDLFSNFESLLIQLGVKECIVPTEGSKKDPELTKLRQII 213
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
D + ++ R ++ +D+ QD+ RL++ +++ LLP+ L A +LI YL
Sbjct: 214 DSCGIAISERPAADYGTKDIEQDLARLLKGENA----IGLLPQTDLKLAMGSASALIKYL 269
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
++ + N QF ++ D S ++ + +A + +L+++P G SL G+L+ C+TP
Sbjct: 270 GVLTDPSNFGQFRLYQHDLSHFMKLDAAALRALNLMP--GPRDGAKSMSLFGLLNHCKTP 327
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLLAQW+KQPL L I +R V + +TE R ++ E LR +PD+ LA + R
Sbjct: 328 IGGRLLAQWLKQPLMSLSEIEKRQQLVEAFIEDTELRQSMQEEHLRSIPDLYRLAKKFQR 387
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLV--------QNVEASNLNTILSSLQSLKMM-- 375
K+A L+D R Y+ + +LP I LE++V Q S L + + L+ L M
Sbjct: 388 KQANLEDVVRAYQVIIRLPGFIGALEAVVDEKYQEPLQAEYTSKLKELSNFLEKLAEMVE 447
Query: 376 --------DRKD---------------AVMDKMKEYLESTARR----LNLVADKTIKLEN 408
DR + A +D+ K ++ RR LN DK + LEN
Sbjct: 448 TTIDLDALDRHEFIIKSEFDDRLRNIRAKLDRAKHDMDVEHRRVGKDLNQELDKKLYLEN 507
Query: 409 SP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQ 465
G+ +R+T I ++ Y + T + GV F +L +Y + Y Q
Sbjct: 508 HRVHGYCFRLTRNEAGCIRNKSQYREISTQKNGVYFTTQKLQELRREYDQLSSSYNRQQS 567
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
S+V EV+ +++ YT + QL+ ++A DV+VS + S AP YVRP M GTG VL
Sbjct: 568 SLVSEVVTVASSYTPVIEQLAAIIAHLDVVVSLAHVSVHAPTAYVRPKMHERGTGDTVLK 627
Query: 526 QCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
+ RHP +E Q +++I NDV K F ++TGPNMGGKSTYIR+IG +AQIGCFV
Sbjct: 628 EARHPCMEAQDDINFITNDVELKRESSRFLIITGPNMGGKSTYIRTIGCIALMAQIGCFV 687
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
PC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T +SL+IIDELGRGTS
Sbjct: 688 PCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATRDSLIIIDELGRGTS 747
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQV------------ 692
T+DGFG+A +I+ E+ + F FATHFHE+ AL R +N+ V
Sbjct: 748 TYDGFGLAWAISEEIVAQIGAFGCFATHFHELTALADRHPNAVKNLHVVAFVGDKDTATG 807
Query: 693 --SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
+A + + LLY+V+PG +S+G+H A++ +PE ++ AR +E E D T
Sbjct: 808 DTAASTKRREVTLLYRVEPGVSDQSFGIHVAELVRFPEKVVNMARRKAEELE---DFTTV 864
Query: 751 SGDETNNR 758
+G++ N +
Sbjct: 865 TGEQKNKQ 872
>gi|302657750|ref|XP_003020589.1| hypothetical protein TRV_05311 [Trichophyton verrucosum HKI 0517]
gi|291184439|gb|EFE39971.1| hypothetical protein TRV_05311 [Trichophyton verrucosum HKI 0517]
Length = 942
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/708 (35%), Positives = 392/708 (55%), Gaps = 60/708 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+PAE + K+ I D
Sbjct: 157 VGVCFADASVRELGVSEFVDNDLYSNFESLLIQLGVKECLIPAEGQKKDVELAKLRQIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T R + F +D+ QD++RL++ D++ +LP+ L A +LI+YL
Sbjct: 217 SCGVAITERPVSAFGTKDIEQDLSRLLK-DET---GPAMLPQTDLKLAMGSASALISYLN 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D ++Y+ + ++ + +L+++P G + SL G+L+ C+TP
Sbjct: 273 AMSDPSNFGQYQLYKHDLAQYMKLDASALRALNLMP--GPRDSMKNMSLYGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + I +R V V +TE R + E+ LR +PD+ LA R R
Sbjct: 331 GGRLLAQWLKQPLMNHKDIEKRQQLVEAFVTDTELRQTMQEHHLRSIPDLYRLAKRFQRG 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ------------------NVEASNLNTILSS 368
KA L+D RVY+ V ++P I+ E ++ + + L ++ +
Sbjct: 391 KANLEDVVRVYQVVIRIPGFINSFEGVMDEQYQTPLDAEYTDKLRKLSQDLGKLAEMVET 450
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L+ +D + + +DK++ ++S RR L +K + LEN
Sbjct: 451 TVDLEALDNHEFIIKPEFDDSLRIIRKKLDKLRHDMDSEHRRVGRDLGQDTEKKLFLENH 510
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I ++ Y T + GV F + ++ + Y Q
Sbjct: 511 RVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSMNYNRTQTG 570
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ ++A Y L QL+ +LA DV+VSF+ S AP YVRP + P GTG+ +L +
Sbjct: 571 LVSEVVNVAASYCPLLEQLAGILAHLDVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKE 630
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +++I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 631 ARHPCMEMQDDITFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 690
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 691 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 750
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---------- 695
+DGFG+A +I+ + + + F+LFATHFHE+ L P N+ V A
Sbjct: 751 YDGFGLAWAISEHIVTEIKCFSLFATHFHELTALEERYPKAVSNLHVVAFIGDGPAAEGK 810
Query: 696 -EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ AR +E E
Sbjct: 811 QKKKQEVTLLYRVEPGVCDQSFGIHVAELVRFPDKVVNMARQKAEELE 858
>gi|406862019|gb|EKD15071.1| MutS domain V [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 916
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 272/766 (35%), Positives = 410/766 (53%), Gaps = 67/766 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDN--KNKIVTILD 146
VGV D ++ + E D+D YSN E++++Q KEC++ + + K+ TI+D
Sbjct: 150 VGVCFADASVRELGVSEFLDNDLYSNFESLLIQLGVKECIIQVDKSEKDVEMTKLKTIID 209
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R +F +D+ QD+ RL++ + K A LP+ L A SLI YL
Sbjct: 210 SCGIAISERPAADFGTKDIDQDLARLLK----DEKAAGTLPQTDLKLAMGSAASLIKYLG 265
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+M++ N Q+ ++ D S+++ + ++ + +L+++P G SL G+LD C+TP
Sbjct: 266 VMHDSSNFGQYQLYQHDLSQFMKLDASALKALNLMP--GPRDGAKTMSLFGLLDHCKTPV 323
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL+QW+KQPL D I +R V V +TE R + E +R +PD+ L R +K
Sbjct: 324 GRRLLSQWLKQPLMSRDEIEKRQQLVEAFVEDTELRQTIQEEHMRSIPDLFRLTKRFQKK 383
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESL--------VQNVEASNLNTILSSLQSLKMM--- 375
A L+D R + V LP I LE + ++ S L L SL L+ M
Sbjct: 384 LATLEDVVRASQVVLSLPGFIGALEGVMDEKYQGPLEETYTSKLREYLESLAKLQEMVET 443
Query: 376 ----------------DRKDAV------MDKMKEYLE----STARRLNLVADKTIKLENS 409
+ D + +DKMK ++ + ++ L DK + LEN
Sbjct: 444 TVDLQAAENHEYIIKPEFDDGLRIIRKKLDKMKVEMDQEHRAASKDLGQEMDKKLFLENH 503
Query: 410 PQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
Q G+ R+T I ++ Y T + GV F +L + ++ + Y Q S
Sbjct: 504 KQHGWCLRLTRTEAGCIRNKRNYQECSTQKNGVYFTTQKLQSIRREFDQLSENYNRTQSS 563
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ ++A Y L L++VLA DV++SF+ S AP YVRP + P G G+ VL
Sbjct: 564 LVNEVVSVAASYCPVLELLANVLAHMDVIISFAHCSVHAPTSYVRPKIHPRGEGNTVLVG 623
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q + +I NDV K GE F ++TGPNMGGKSTYIR IGV +AQIGCFVP
Sbjct: 624 ARHPCMEMQDDIQFITNDVTLKRGESEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVP 683
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
CD A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 684 CDEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 743
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN------ 700
+DGFG+A +I+ + F++FATHFHE+ L P N+ V A +DN
Sbjct: 744 YDGFGLAWAISEHIVKEIGCFSMFATHFHELTALVEQYPQVHNLHVVA-HIDDNGKAKRE 802
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREE 760
+ LLY+V+ G C +S+G+H A++ +PE ++ A+ E E +K T +E+
Sbjct: 803 VTLLYKVEEGVCDQSFGIHVAELVRFPEKVVNMAKRKADELE-DFTSKHEGQAITYGKED 861
Query: 761 EYFKTVQEGEYQMFDFL----QQC--LSLSKQKDTNRILHLQETQE 800
V+EG + D L Q+C SLSK++ ++ L + E
Sbjct: 862 -----VEEGSALLKDVLMKWKQECEGKSLSKEEKIGKMRDLVKGDE 902
>gi|302501199|ref|XP_003012592.1| hypothetical protein ARB_01205 [Arthroderma benhamiae CBS 112371]
gi|291176151|gb|EFE31952.1| hypothetical protein ARB_01205 [Arthroderma benhamiae CBS 112371]
Length = 942
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/726 (34%), Positives = 400/726 (55%), Gaps = 64/726 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+PAE + K+ I D
Sbjct: 157 VGVCFADASVRELGVSEFVDNDLYSNFESLLIQLGVKECLIPAEGQKKDVELAKLRQIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T R + F +D+ QD++RL++ D++ +LP+ L A +LI+YL
Sbjct: 217 SCGVAITERPVSAFGTKDIEQDLSRLLK-DET---GPAMLPQTDLKLAMGSASALISYLN 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D ++Y+ + ++ + +L+++P G + SL G+L+ C+TP
Sbjct: 273 AMSDPSNFGQYQLYKHDLAQYMKLDASALRALNLMP--GPRDSMKNMSLYGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 331 GGRLLAQWLKQPLMNHKDIEKRQQLVEAFVTDTELRQTMQESHLRSIPDLYRLAKRFQRG 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ------------------NVEASNLNTILSS 368
KA L+D RVY+ V ++P I+ E ++ + + L ++ +
Sbjct: 391 KANLEDVVRVYQVVIRIPGFINSFEGVMDEQYQTPLDAEYTDKLRKLSQDLGKLAEMVET 450
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L+ +D + + +DK++ ++S RR L +K + LEN
Sbjct: 451 TVDLEALDNHEFIIKPEFDDSLRIIRKKLDKLRHDMDSEHRRVGRDLGQDTEKKLFLENH 510
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I ++ Y T + GV F + ++ + Y Q
Sbjct: 511 RVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSMNYNRTQTG 570
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ ++A Y L QL+ +LA DV+VSF+ S AP YVRP + P GTG+ +L +
Sbjct: 571 LVSEVVNVAASYCPLLEQLAGILAHLDVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKE 630
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +++I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 631 ARHPCMEMQDDITFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 690
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 691 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 750
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---------- 695
+DGFG+A +I+ + + + F+LFATHFHE+ L P N+ V A
Sbjct: 751 YDGFGLAWAISEHIVTEIKCFSLFATHFHELTALEERYPKAVSNLHVVAFIGDGPAAEGK 810
Query: 696 -EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDE 754
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ AR +E L+ T SG +
Sbjct: 811 QKKKQEVTLLYRVEPGVCDQSFGIHVAELVRFPDKVVNMARQKAEE----LEDFTSSGAD 866
Query: 755 TNNREE 760
+ +++
Sbjct: 867 SEGKQK 872
>gi|405118126|gb|AFR92901.1| DNA mismatch repair protein MSH2 [Cryptococcus neoformans var.
grubii H99]
Length = 954
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 258/716 (36%), Positives = 402/716 (56%), Gaps = 55/716 (7%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
NTVGV VD+ K + E DD+ +SN E++++Q KEC+L A+ K+ +++
Sbjct: 167 NTVGVGFVDVQEKVVGVSEFVDDENFSNTESLLIQLGVKECVLQADEKRPELAKLRMLVE 226
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T RK +EF +++ QD+NRL+ D+S A LPE L A L +LINYL
Sbjct: 227 WCGVIVTDRKSSEFQTKNVEQDLNRLL--DESHAGAA--LPEFDLKIAMSALSALINYLS 282
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
L+++ Q +H D S+Y+ + ++ + +L+++P S+ G+L+RC+T Q
Sbjct: 283 LLSDLSLHGQLRLHRHDLSQYMKLDASALKALNLMPNPQELGGNRNMSIYGLLNRCKTSQ 342
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL +W+KQPL + I++R V + V ++ R ++ L+ +PD ++ + ++
Sbjct: 343 GTRLLGRWLKQPLVNRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKR 402
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES----------LVQNVEASNLNTILSSLQSLKMMD 376
AGL+D RVY+ V LP L ILE+ L++ + L + L + M
Sbjct: 403 VAGLEDVVRVYQAVQLLPGLQEILENANTPELGARDLIEEIWLKPLREHIEKLVNYSSMV 462
Query: 377 RKDAVMDKM-------------------------KEYLESTARR----LNLVADKTIKLE 407
+D++ ++ L+ RR L L DK + LE
Sbjct: 463 EDTIDLDELANHNYVILPTIDEDLQRFREELLNVRDQLDDEHRRVGNDLGLDIDKKLHLE 522
Query: 408 NSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
N +++RIT + I ++ Y L T + G F L + +Y +Q YE Q
Sbjct: 523 NHQVYKYSFRITKAEASLIRNKKEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQQ 582
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ +V+EV+ I++ YT L L +++A DV+VS + S+ AP PYV+P + GTG +V+
Sbjct: 583 RHLVKEVVSIASSYTPVLEMLDNLIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVVV 642
Query: 525 NQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
RHP +E+Q + +IPND + G+ F ++TGPNMGGKSTYIR IGV +AQ+GCF
Sbjct: 643 LGARHPCLEVQDDIVFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGCF 702
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP A + + D I RVGA D+Q +G+STFM EM ETAT+++ T++SL+IIDELGRGT
Sbjct: 703 VPATEARLPIFDCILARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGT 762
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL--------- 695
ST+DGFG+A +I+ +A F LFATHFHE+ LS P +N+ V AL
Sbjct: 763 STYDGFGLAWAISEYIAEKIHCFCLFATHFHELTTLSEKNPHVKNLHVEALVKDKDGEGG 822
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
+E ++ LLYQVK G C +S+G+H A++A +PE +++ A+ +E E D +T +
Sbjct: 823 GKERDITLLYQVKEGICDQSFGIHVAELANFPESVVKLAKRKAEELEDFGDDQTSA 878
>gi|258566327|ref|XP_002583908.1| DNA mismatch repair protein msh-2 [Uncinocarpus reesii 1704]
gi|237907609|gb|EEP82010.1| DNA mismatch repair protein msh-2 [Uncinocarpus reesii 1704]
Length = 1447
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/741 (34%), Positives = 410/741 (55%), Gaps = 63/741 (8%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVT 143
T VGV D ++ + E D+D YSN E++++Q KECL+ A+ + KI +
Sbjct: 659 TRHVGVCFADASVRELGVSEFDDNDLYSNFESLVIQLGVKECLVTADGQKKDIELAKIRS 718
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I D + ++ R ++F+ D+ QD+ RL++ + + LP+ L A +LI
Sbjct: 719 IADSCGIAISSRPASDFATRDIDQDLARLLKNEHA----TGTLPQTDLKLAMGSAAALIK 774
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL M++ N Q+ ++ D S+Y+ + SA + +L+++P G SL G+L+ C+
Sbjct: 775 YLGAMSDPSNFGQYQLYQHDLSQYMKLDSAALRALNLMP--GPRDGAKSMSLYGLLNHCK 832
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLLAQW+KQPL + + I +R V V++T+ R + E LR +PD+ LA +
Sbjct: 833 TPVGGRLLAQWLKQPLMNHNDIEKRQQLVEAFVSDTDLRQTMQEDHLRSIPDLYRLAKKF 892
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESL----------------VQNVEAS--NLNTI 365
R A L+D R+Y+ V +LP I+ LE++ ++N+ S L +
Sbjct: 893 QRNVANLEDVVRIYQVVIRLPGFINTLEAVMDEQYQEPLETEYTSKIRNLSNSFGKLAEM 952
Query: 366 LSSLQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKL 406
+ + L+ +D + + +D+++ +++ + LN +K + L
Sbjct: 953 VETTVDLEALDHHEFIIKPEFDESLRTIRKKLDRLRHDMDAEHKHVGHDLNQDIEKKLFL 1012
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ +R+T I ++ Y T + GV F + + ++ + + Y
Sbjct: 1013 ENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQSLRREHDQLSQNYNRT 1072
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+ ++A Y L QL+ VLA DV+VSF+ S AP PYVRP + P GTG+ +
Sbjct: 1073 QTGLVNEVVNVAASYCPLLEQLAGVLAHLDVIVSFAHVSVHAPTPYVRPKVHPRGTGNTI 1132
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GC
Sbjct: 1133 LKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGC 1192
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 1193 FVPCTEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKTATSESLIIIDELGRG 1252
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL------- 695
TST+DGFG+A +I+ + + + F LFATHFHE+ L P + +N+ V A
Sbjct: 1253 TSTYDGFGLAWAISEHIVAEIRCFGLFATHFHELTALEERYPKSAKNLHVVAFIGDGSSE 1312
Query: 696 -------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK 748
+++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E ++
Sbjct: 1313 TQNGTPSKKKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTNST 1372
Query: 749 TPSGDETNNREEEYFKTVQEG 769
G+++ + ++ + V EG
Sbjct: 1373 AEKGEDSMDLDKYSCEEVAEG 1393
>gi|242767113|ref|XP_002341306.1| DNA mismatch repair protein Msh2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218724502|gb|EED23919.1| DNA mismatch repair protein Msh2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 944
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 258/723 (35%), Positives = 392/723 (54%), Gaps = 61/723 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
+GV D ++ + E D+D YSN E++++Q KEC++ + + K+ I D
Sbjct: 162 IGVCFADASVRELGVSEFLDNDVYSNFESLVIQLGVKECVIQLDSSKKDAELAKLRAIAD 221
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ +T R +F D+ QD+ RL+R + ++A LP+ L A SLI YL
Sbjct: 222 TCGIAITERPAADFGTRDIEQDLTRLLR----DERSAATLPQTELKLAMGAAASLIKYLG 277
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+M++ N Q+ ++ D S+Y+ + ++ + +L+++P G SL G+L+ C+TP
Sbjct: 278 VMSDSTNFGQYQLYQHDLSQYMKLDASALRALNLMP--GPRDGAKNMSLYGLLNHCKTPV 335
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL D I +RH V V +TE R + E LR +PD+ LA R R
Sbjct: 336 GSRLLAQWLKQPLMDQVEIEKRHQLVEAFVVDTELRQTMQEEHLRAIPDLYRLAKRFQRS 395
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESL----------------VQNVEAS--NLNTILSS 368
+A L+D RVY+ +LP I E++ ++N+ S NL ++ +
Sbjct: 396 QANLEDVVRVYQVAIRLPGFIRSFENIMDEQYQTPLDDQYTTKLRNMSNSLANLEEMVET 455
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L +D + + +DK++ ++ RR LN +K + +EN
Sbjct: 456 TVDLDALDNHEFIIKPEFDDSLRVIRKKLDKLRYDMDVEHRRVAKDLNQDMEKKLFMENH 515
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I ++ Y T + GV F + ++ + Y Q
Sbjct: 516 RVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTRTMQELRREHDQLSSNYNRTQSG 575
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V+EV+ ++A Y L QL+ LA DV+VSF+ S AP Y RP M P GTG+ +L +
Sbjct: 576 LVQEVVNVAASYCPVLEQLAGTLAHLDVIVSFAHVSVHAPTAYTRPKMHPRGTGNTILKE 635
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +S+I NDV SF ++TGPNMGGKSTYIR IGV +AQIGCFVP
Sbjct: 636 ARHPCMEMQDDISFITNDVSLLRDVSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVP 695
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGRGTST
Sbjct: 696 CTEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTST 755
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL---------E 696
+DGFG+A +I+ + F LFATHFHE+ AL R +N+ V A
Sbjct: 756 YDGFGLAWAISEHIVREIGCFGLFATHFHELTALADRYPKAVKNLHVVAFIGDAKEGESS 815
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETN 756
++ + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E D T + D T
Sbjct: 816 KKREVTLLYRVEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELE---DFTTATSDNTE 872
Query: 757 NRE 759
+E
Sbjct: 873 KKE 875
>gi|407928260|gb|EKG21122.1| hypothetical protein MPH_01541 [Macrophomina phaseolina MS6]
Length = 933
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 278/852 (32%), Positives = 425/852 (49%), Gaps = 122/852 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKSNVVY----LVKTMGQKDKTLE 56
F FF K T+R F+R +FY HG+DA I + VY +++ +G ++ LE
Sbjct: 15 FIRFFRNLATKPDDTVRIFDRGDFYTAHGDDAVFI---ARTVYRTTSVLRQLG-REPGLE 70
Query: 57 TVLVN--------------------------KSNLSCFSHI----LCVISEDK------- 79
+V ++ +SN L + ED
Sbjct: 71 SVTLSITVFRNFLREALFRLGKRIEIWESTGRSNWKVSKQASPGNLQDVEEDLGGQLDSA 130
Query: 80 --------TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA 131
T + VGV D ++ + E D+D YSN E++++Q KECLL A
Sbjct: 131 PIILAVKITAKASEARHVGVCFADASVRELGVSEFLDNDLYSNFESLLIQLGAKECLLQA 190
Query: 132 EYLNDNKN--KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEM 189
+ + K+ TI D ++ R +F +D+ QD++RL+R + + LP+
Sbjct: 191 DSSRKDAELAKLRTIADNCGCAVSERGSTDFGTKDIDQDLSRLLR----DERAVGTLPQT 246
Query: 190 CLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSA 249
L A +LI YL +M+++ N Q+ ++ D S+++ + +A + +L+++P G
Sbjct: 247 DLKLAMGAAAALIRYLGVMSDQTNFGQYQLYQHDLSQFMKLDAAALKALNLMP--GPRDG 304
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
SL G+L+ C+TP G RLLAQW+KQPL D+ I R V V +TE R + E
Sbjct: 305 SKTMSLYGLLNHCKTPLGSRLLAQWLKQPLMDVREIERRQQLVEAFVMDTELRQTMQEEH 364
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL--------VQNVEASN 361
LR +PD+ LA + RK A L+D R Y+ +LP + LE + + + S
Sbjct: 365 LRSIPDLYRLAKKFQRKMANLEDVVRAYQVAIRLPGFLGTLEGVMDEQYKDPLDSEYTSK 424
Query: 362 LNTILSSLQSLKMMDRKDAVMDKMKEY-----------LESTARRLNLVA---------- 400
LN +SL L+ M ++ + + L + +RRL +
Sbjct: 425 LNECSNSLAKLQEMVETTVDLEALDNHEFIIKPEFDDDLRNISRRLEKLRKSMQIEHTRV 484
Query: 401 --------DKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATA 449
DK + +EN G+ +R+T I ++ YT T + GV F + LA
Sbjct: 485 SNDLDQDIDKKLFMENHKVHGWCFRLTRNEAGCIRNKKQYTECSTQKNGVYFTTENLAEL 544
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
++ + Y Q+ +V EV+ ++A Y + +L+ +LA DV+VSF+ S AP Y
Sbjct: 545 RREFDQLSENYNRTQRGLVNEVVNVAASYCPVIEKLAGILAHLDVIVSFAHVSVHAPTAY 604
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
VRP M GTG+ +L + RHP +E+Q +S+I NDV G+ F ++TGPNMGGKSTYI
Sbjct: 605 VRPKMHDRGTGNTILKEARHPCMEMQDDISFITNDVSLVRGQSEFLIITGPNMGGKSTYI 664
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R IGV LAQ+GCFVPC A + + D I RVGA+DS +G+STFM EM ETA ++K
Sbjct: 665 RQIGVIALLAQVGCFVPCSEAELCIFDSILARVGASDSTLKGVSTFMAEMLETANILKSA 724
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T SL+IIDELGRGTST+DGFG+A +I+ + F FATHFHE+ L P +N
Sbjct: 725 TRESLIIIDELGRGTSTYDGFGLAWAISEHIVREIGAFAAFATHFHELTALVDTYPQVQN 784
Query: 690 VQVSA-------------------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDM 730
+ V A E+ + LLY+V+PG C +S+G+H A++ +P+ +
Sbjct: 785 LHVVAHIGEGQQDTTMGDGDEDAPPEKRREVTLLYKVEPGVCDQSFGIHVAELVRFPQKV 844
Query: 731 LEQARDLMKEYE 742
+ A+ E E
Sbjct: 845 VNMAKRKADELE 856
>gi|322708049|gb|EFY99626.1| DNA mismatch repair protein MSH2 [Metarhizium anisopliae ARSEF 23]
Length = 1058
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 279/846 (32%), Positives = 426/846 (50%), Gaps = 116/846 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT-LETV 58
F F+ P + TIR F+R ++Y HG++A I + +++ +G+ D T L +V
Sbjct: 151 FIRFYKSLPDVGEDTIRIFDRGDWYTAHGDNASFIAKTVYKTTSVLRQLGRNDHTGLPSV 210
Query: 59 LV---------------------------NKSNLSCFSH--------------------- 70
+ + N C
Sbjct: 211 TMTVTVFRQFLREALFKLGKRIEIWESPSGRMNWKCVKQASPGNLQDIEDDLGGQIESAP 270
Query: 71 -ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
I+ V K E VGV D ++ + E D+D YSN E++++Q +EC++
Sbjct: 271 MIIAVKISAKASEA---RNVGVCFADASVRELGVSEFLDNDLYSNFESLLIQLGVRECVI 327
Query: 130 PAEYLNDNKN----KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL 185
+ + +K+ K+ I+D V + R +F D+ QD+ RL++ D K+ L
Sbjct: 328 QLDKGDKDKDPELAKLKQIIDNCGVAIAERPAGDFGTRDIEQDLARLLKDD----KSVNL 383
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG 245
LP+ L A SLI YL ++ + N Q+ ++ D ++++ + +A + +L+++P G
Sbjct: 384 LPQTDLKLAMGSAASLIKYLGVLQDPSNFGQYHLYQHDLAQFMKLDAAALKALNLMP--G 441
Query: 246 STSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
S+ G+L+ C+TP G RLLAQW+KQPL D D I +R V N+TE R +
Sbjct: 442 PRDGSKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMDKDEIEKRQQLVEAFFNDTELRQTM 501
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-------- 357
E LR +PD+ L+ R R KA L+D R Y+ V +LP I E ++
Sbjct: 502 QEEHLRSVPDLYRLSKRFQRGKANLEDVVRAYQVVIRLPGFIGTFEGVMDEAYRDPLDIA 561
Query: 358 ---EASNLNTILSSLQS-------LKMMDRKDAVM--------------------DKMKE 387
+ L+ L LQ L +DR + ++ D E
Sbjct: 562 YTTKLRELSDNLGKLQDMVEQTVDLDALDRHEYIIKSEYDQGLQTIRKKLDQLDRDIRAE 621
Query: 388 YLESTARRLNLVADKTIKLENSPQ--GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQD 443
+ E+ AR L ADK I LE S + G R+T + I ++ Y T + GV F
Sbjct: 622 FHEA-ARDLGQEADKKIFLETSHKVHGVCMRLTRQEAGCIRNKSSYQECSTQKNGVYFTT 680
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
++ + +Y + + Y Q S+V EV+ +++ Y L +L+ VLA DV+VS + S
Sbjct: 681 KKMQSYRREYDQLSQNYNRTQSSLVNEVVNVASSYCPVLERLAGVLAHLDVIVSLAHCSV 740
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP+ YVRP + G G L RHP +ELQ V +I ND+ F + SF ++TGPNMG
Sbjct: 741 HAPEAYVRPKIHTRGEGQTRLIGARHPCMELQDDVQFITNDLEFTRDKSSFLIITGPNMG 800
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR GV +AQIGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA
Sbjct: 801 GKSTYIRQAGVIALMAQIGCFVPCAEAELTIFDSILARVGASDSQLKGVSTFMAEMLETA 860
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
++K T+ SL+IIDELGRGTST+DGFG+A +I+ + F +FATHFHE+ L+
Sbjct: 861 NILKSATKESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADQ 920
Query: 684 IPTFRNVQVSAL---EQEDN----LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
P RN+ V+A +DN + LLY+V+PG C +S+G+H A++ +P+ ++ A+
Sbjct: 921 YPQVRNLHVTAHISGTGKDNSKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKR 980
Query: 737 LMKEYE 742
E E
Sbjct: 981 KADELE 986
>gi|327308508|ref|XP_003238945.1| DNA mismatch repair protein Msh2 [Trichophyton rubrum CBS 118892]
gi|326459201|gb|EGD84654.1| DNA mismatch repair protein Msh2 [Trichophyton rubrum CBS 118892]
Length = 942
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/708 (35%), Positives = 391/708 (55%), Gaps = 60/708 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+PAE + K+ I D
Sbjct: 157 VGVCFADASVRELGVSEFVDNDLYSNFESLLIQLGVKECLIPAEGQKKDVELAKLRQIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T R F +D+ QD++RL++ D++ +LP+ L A +LI+YL
Sbjct: 217 SCGVAITERPAGAFGTKDIEQDLSRLLK-DET---GPAMLPQTDLKLAMGSASALISYLN 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D ++Y+ + ++ + +L+++P G + SL G+L+ C+TP
Sbjct: 273 SMSDPSNFGQYQLYKHDLAQYMKLDASALRALNLMP--GPRDSMKNMSLYGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 331 GGRLLAQWLKQPLMNHKDIEKRQQLVEAFVTDTELRQTMQENHLRSIPDLYRLAKRFQRG 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ------------------NVEASNLNTILSS 368
KA L+D RVY+ V ++P I+ E ++ + + L ++ +
Sbjct: 391 KANLEDVVRVYQVVIRIPGFINSFEGVMDEQYQTPLDAEYTDKLRKLSQDLGKLAEMVET 450
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L+ +D + + +DK++ ++S RR L +K + LEN
Sbjct: 451 TVDLEALDNHEFIIKPEFDDSLRIIRKKLDKLRHDMDSEHRRVGRDLGQDTEKKLFLENH 510
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I ++ Y T + GV F + ++ + Y Q
Sbjct: 511 RVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSMNYNRTQTG 570
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ ++A Y L QL+ +LA DV+VSF+ S AP YVRP + P GTG+ +L +
Sbjct: 571 LVGEVVNVAASYCPLLEQLAGILAHLDVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKE 630
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +++I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 631 ARHPCMEMQDDITFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 690
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 691 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 750
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---------E 696
+DGFG+A +I+ + + + F+LFATHFHE+ L P N+ V A +
Sbjct: 751 YDGFGLAWAISEHIVTEIKCFSLFATHFHELTALEERYPKAVSNLHVVAFIGDGPAAEGK 810
Query: 697 QEDN--LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
Q+ N + LLY+V+PG C +S+G+H A++ +P+ ++ AR +E E
Sbjct: 811 QKKNQEVTLLYRVEPGVCDQSFGIHVAELVRFPDKVVNMARQKAEELE 858
>gi|255541826|ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
gi|223549157|gb|EEF50646.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
Length = 936
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 282/844 (33%), Positives = 437/844 (51%), Gaps = 113/844 (13%)
Query: 4 YLFFF---PQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
+L FF P + +R F+R ++Y HGE+A I + + ++ +G L +V
Sbjct: 20 FLSFFKTLPHDPRA-VRVFDRRDYYTSHGENATFIAKTYYHTTTALRQLGSGPDGLSSVS 78
Query: 60 VNKSNLSCFSHILCVISEDKTLE------------------------------------- 82
++K+ + L + D TLE
Sbjct: 79 ISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDVLFANNEMQDSP 138
Query: 83 ---TVLTN------TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
V+ N ++G+ VDL + + E DD +++NLE+ +V KECLLP E
Sbjct: 139 AVAAVIPNFRENGCSIGLGYVDLTKRILGLAEFLDDSHFTNLESALVALGCKECLLPIES 198
Query: 134 LNDNKNKIV-TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+ + + L R V +T RKKNEF DL++D+ RLV+ ++ R L
Sbjct: 199 GKSIECRTLHDALTRCGVMLTERKKNEFKTRDLVEDLGRLVK---GSIEPVRDLVS-GFE 254
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A L +L++Y EL+ +E N ++I + Y+ + SA M +L+VL + T A
Sbjct: 255 FAPGALGALLSYAELLADESNYGNYTIRKYNLDSYMRLDSAAMRALNVL--ESKTDANKN 312
Query: 253 DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+++R C G RLL W+KQPL D++ I R V V +T R +L ++ L+
Sbjct: 313 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAFVEDTALRQDLRQH-LK 371
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP-------------------KLISILES 352
+ D++ L + +++AGL+ ++Y+ +LP + + LES
Sbjct: 372 RISDIERLVHNLEKRRAGLQHIVKLYQSSIRLPYIRGALDKYDGQFSSLIKERYLDPLES 431
Query: 353 LVQNVEASNLNTILSSLQSLKMMDRK--------DAVMDKMKEYLES-----------TA 393
L + + ++ + L +D D + +K+ ES TA
Sbjct: 432 LTDDDHLNKFIALVETSVDLDQLDNGEYLISPSYDPALSALKDEQESLECQIHNLHKQTA 491
Query: 394 RRLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLAT 448
+ L+L DK +KL+ Q G +RIT K + + ++ +L+T + GV+F + +L
Sbjct: 492 QDLDLPQDKGLKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 551
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
QYQ I EY+ Q+ +V V+ +A +++ L+ +L+Q DVL+SF+ +T P P
Sbjct: 552 LGDQYQKIVEEYKNCQKELVNRVVQTAATFSEVFKSLAGLLSQLDVLLSFADLATSCPTP 611
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
Y RP + P G+++L RHP VE Q V++IPND GE F ++TGPNMGGKST+
Sbjct: 612 YTRPDITPSDVGNIILEGSRHPCVEAQDWVNFIPNDCKLIRGESWFQIITGPNMGGKSTF 671
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR +GV++ +AQ+G FVPCD A+ISV D IF RVGA D Q RG+STFM EM ETA+++K
Sbjct: 672 IRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 731
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS------- 681
T+ SL+IIDELGRGTST+DGFG+A +I L + TLFATHFHE+ L+
Sbjct: 732 ATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVIKAPTLFATHFHELTGLADEKAEPH 791
Query: 682 -RVIPTFRNVQVSALEQEDN--LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLM 738
+ I N VSA N L +LY+V+PG+C +S+G+H A+ A +PE ++ AR+
Sbjct: 792 MKQIAGVANYHVSAHIDSSNRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKA 851
Query: 739 KEYE 742
E E
Sbjct: 852 AELE 855
>gi|380496043|emb|CCF31929.1| DNA mismatch repair protein msh-2 [Colletotrichum higginsianum]
Length = 921
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 258/726 (35%), Positives = 392/726 (53%), Gaps = 66/726 (9%)
Query: 71 ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
IL V KT E +VGV D ++ + E D+D +SN EA+++Q +ECL+
Sbjct: 136 ILAVKISTKTSEA---RSVGVCFADASVRELGVSEFLDNDLFSNFEALLIQLGVRECLIQ 192
Query: 131 AEYLNDNKN----KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
+ + NK+ K+ I+ V ++ R EF +D+ QD+ RL++ + ++ LL
Sbjct: 193 MDKADKNKDPDLTKLKQIIGNCGVSVSERSAGEFGTKDIEQDLARLLK----DERSTTLL 248
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
P+ L A +LI YL ++++ N Q+ ++ D S+++ + +A + +L+++P G+
Sbjct: 249 PQTDLKLAMGSAAALIKYLGVLHDPSNFGQYQLYQHDLSQFMKLDAAALKALNLMP--GA 306
Query: 247 TSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLH 306
SL G+L+ C+TP G RLL+QW+KQPL + I +R V VN+TE R +
Sbjct: 307 RDGAKSMSLYGLLNHCKTPVGSRLLSQWLKQPLMNKAEIEKRQQLVEAFVNDTELRQTMQ 366
Query: 307 EYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE--------------- 351
E LR +PD+ LA R R KA L+D R Y+ + +LP + LE
Sbjct: 367 EEHLRSVPDLYRLAKRFQRGKANLEDVVRAYQVIIRLPGFMGTLEGVMDEAYRDPLDETY 426
Query: 352 ---------SLVQNVEASNLNTILSSLQ------------SLKMMDRKDAVMDKMKEYLE 390
SL + E L +L SL+++ +K +DK+K ++
Sbjct: 427 TTPLRGLSNSLAKLAEMVETTVDLDALDNHEYIIKPEFDDSLRIIRKK---LDKLKRDID 483
Query: 391 ----STARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQD 443
AR L K I LEN G+ R+T + +I ++ Y T + GV F
Sbjct: 484 QEFSDAARDLKQEVGKKIFLENHKVHGYCMRLTRQEAGAIRNKSGYQECSTQKNGVYFTT 543
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
L + ++ + + Y Q S+V EV+G++A Y L +L+ +LA DV+VSF+ S
Sbjct: 544 KTLQSLRREFDQLSQNYNRTQSSLVSEVVGVAASYCPVLERLAGILAHLDVIVSFAHCSV 603
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP YVRP M G G +L + RHP +E+Q V +I NDV + SF ++TGPNMG
Sbjct: 604 HAPSEYVRPTMHKRGEGQTILKEARHPCLEMQDDVQFITNDVTLTRDKSSFLIITGPNMG 663
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR IGV +AQIGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA
Sbjct: 664 GKSTYIRQIGVIALMAQIGCFVPCTEAELTIFDSILARVGASDSQLKGVSTFMAEMLETA 723
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
++K T SL+IIDELGRGTST+DGFG+A +I+ + F +FATHFHE+ L+
Sbjct: 724 NILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADE 783
Query: 684 IPTFRNVQVSAL-------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
P N+ V+A + + LLY+V G C +S+G+H A++ +P+ ++ A+
Sbjct: 784 HPQVHNLHVAAHIGGGGGENSKREVTLLYKVDDGVCDQSFGIHVAELVRFPDKVVRMAKR 843
Query: 737 LMKEYE 742
E E
Sbjct: 844 KADELE 849
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 HKFYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT 54
H F FF P + T+R F+R ++Y HGEDA I R +V+T+G+ +KT
Sbjct: 13 HGFIRFFKSLPAVHEDTVRIFDRGDWYTSHGEDANFIARTVYKTTSVVRTLGRDEKT 69
>gi|330930898|ref|XP_003303190.1| hypothetical protein PTT_15308 [Pyrenophora teres f. teres 0-1]
gi|311320956|gb|EFQ88715.1| hypothetical protein PTT_15308 [Pyrenophora teres f. teres 0-1]
Length = 929
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 253/718 (35%), Positives = 388/718 (54%), Gaps = 73/718 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-----NKIVT 143
VGV D ++ + E D+D YSN E++++Q KECL+ L+ +K +K+ T
Sbjct: 149 VGVCFADASVRELGVTEFLDNDLYSNFESLLIQLGVKECLIQ---LDSSKKDVELSKLRT 205
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I D + R + +F +D+ QD+ RL++ + + A LP L+ A LI
Sbjct: 206 IADNCGCAVAERAQADFGTKDIDQDLPRLLK----DERAAGSLPLTDLSLAMGSAACLIR 261
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL +M++ N Q+ ++ D S+Y+ + +A + +L+++P G SL G+L+ C+
Sbjct: 262 YLGVMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNLMP--GPRDGAKNMSLYGLLNHCK 319
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLLAQW+KQPL +++ I R V VN+TE R + E LR +PD+ LA +
Sbjct: 320 TPTGSRLLAQWLKQPLMNVEEIERRQQLVEAFVNDTELRQTMQEEHLRSIPDLYRLAKKF 379
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQ------------------NVEASNLNTI 365
RK A L+D R Y+ V +LP +S LE+++ + L +
Sbjct: 380 QRKAANLEDVVRAYQVVIRLPGFLSSLEAVIDEQYKEPLDAEYTDKLRQYTAAFAGLQDM 439
Query: 366 LSSLQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKL 406
+ + L+ +D + + +DK+K +ES R LN +K + L
Sbjct: 440 VETTVDLEALDNHEFIIKPEFDESLKVIRKRLDKLKREMESEHMRVGDDLNQDTEKKLFL 499
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ +R+T I + Y + T + GV F + L ++ + Y
Sbjct: 500 ENHKVNGWCFRLTRNEAGCIRQKKQYQEISTQKNGVYFTTNTLQEKRREFDQLSENYNRT 559
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+ +++ Y + +L+ VLA DV+V+F+ S AP Y RP M P GTG+ V
Sbjct: 560 QSGLVNEVVSVASSYVPVVEKLAAVLAHLDVIVAFAHVSVHAPTSYTRPTMHPRGTGNTV 619
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV E F ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 620 LKEARHPCMEMQDDISFITNDVSLIRNESEFLIITGPNMGGKSTYIRQIGVIALMAQIGC 679
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T+ SL+IIDELGRG
Sbjct: 680 FVPCSEAELTIFDCILARVGASDSQIKGVSTFMAEMLETANILKSATKESLIIIDELGRG 739
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV----------- 692
TST+DGFG+A +I+ + F LFATHFHE+ L P +N+ V
Sbjct: 740 TSTYDGFGLAWAISEYIVKEIGAFALFATHFHELTALVDTYPQVQNLHVVAHISEGNTPA 799
Query: 693 --------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
A+E++ + LLY+V+PG +S+G+H A++ +P+ ++ A+ E E
Sbjct: 800 NEDGDVDMDAVEKKREVTLLYKVEPGFSDQSFGIHVAELVRFPQKVINMAKRKADELE 857
>gi|400601702|gb|EJP69327.1| DNA mismatch repair protein MSH2 [Beauveria bassiana ARSEF 2860]
Length = 925
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 279/851 (32%), Positives = 421/851 (49%), Gaps = 123/851 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKSNVVY----LVKTMGQKDKT-L 55
F FF P + T+R F+R ++Y HG+DA I +N VY +V+ +G+ D T L
Sbjct: 15 FIRFFKSLPAVNDDTVRIFDRGDWYTSHGDDANYI---ANTVYKTTSVVRQLGRNDHTGL 71
Query: 56 ETVLV---------------------------NKSNLSCFSH------------------ 70
+V + + N C
Sbjct: 72 PSVTMTVTVFRQFLREALFKLGRRVEIWQSSNGRMNWKCIKQASPGNLQDVEDDLGGQVE 131
Query: 71 ----ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
I+ V K E VGV D ++ + E D+D YSN EA+++Q +E
Sbjct: 132 SAPMIMAVKISAKASEA---RAVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVRE 188
Query: 127 CLLPAEYLNDNKN----KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN 182
CLLP + +K+ K+ I+D V + R N+F D+ QD+ RL++ + K
Sbjct: 189 CLLPQDKSEKDKDPELAKLRQIIDNCGVAIAERPANDFGIRDIDQDLARLLK----DEKA 244
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
LLP+ L A SLI YL ++ + N Q+ ++ D ++++ + +A + +L+++P
Sbjct: 245 TGLLPQTDLKLAMGSASSLIKYLGILQDVSNFGQYQLYQHDLAQFMKLDAAALKALNLMP 304
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
G S+ G+L+ C+TP G RLLAQW+KQPL + I +R V +TE R
Sbjct: 305 --GPRDGAKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMKKEEIEKRQQLVEAFYTDTELR 362
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ------- 355
+ E LR +PD+ L+ R R KA L+D R Y+ V +LP I LE ++
Sbjct: 363 QTMQETHLRSVPDLYRLSKRFQRGKANLEDVVRAYQVVIRLPGFIGTLEGVMDETYRDPL 422
Query: 356 ----NVEASNLNTILSSLQS-------LKMMDRKDAVMD-------------------KM 385
+ +L+ L LQ L +DR + ++ +
Sbjct: 423 DEAYTTKLRDLSDSLGRLQDMVEQTVDLNALDRHEYIIKPDYDAGLRIIRKKLDQLDRSI 482
Query: 386 KEYLESTARRLNLVADKTIKLENSPQ--GFAYRITMKLNNSIDDR--YTILDTVRGGVRF 441
+E A L+ ADK I LE S + G R+T + I ++ Y T + GV F
Sbjct: 483 REEFNEAAHDLDQEADKKIFLETSHKVHGVCMRLTRQEAGCIRNKSKYQECSTQKNGVYF 542
Query: 442 QDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIA 501
+L ++ + + Y Q +V EV+ ++A Y L +L+ VLA DV+VS +
Sbjct: 543 TTKKLQAYRREHDQLSQNYNRTQSGLVHEVVQVAASYCPVLERLAGVLAHLDVIVSLAHC 602
Query: 502 STCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
S AP+ YVRP + P G G L RHP +ELQ V +I NDV SF ++TGPN
Sbjct: 603 SVNAPEAYVRPTIHPRGQGQTRLLGARHPCLELQDDVQFITNDVTLTRDTSSFLIITGPN 662
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +G +AQ+GCFVPC A +++ D I RVGA+DSQ +G+STFM EM E
Sbjct: 663 MGGKSTYIRQVGAIALMAQVGCFVPCAEAELTIFDAILARVGASDSQLKGVSTFMAEMLE 722
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA ++K T SL+IIDELGRGTST+DGFG+A +I+ + + F +FATHFHE+ L+
Sbjct: 723 TANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIIKEIRCFAMFATHFHELTALA 782
Query: 682 RVIPTFRNVQVSA----------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDML 731
P N+ V+A + + LLY+V+PG C +S+G+H A++ +P+ ++
Sbjct: 783 DQHPHVANLHVTAHIGGAGGDGAKADKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVV 842
Query: 732 EQARDLMKEYE 742
A+ E E
Sbjct: 843 RMAKRKADELE 853
>gi|406604110|emb|CCH44419.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 929
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 263/751 (35%), Positives = 430/751 (57%), Gaps = 73/751 (9%)
Query: 59 LVNKSNLSCFSHILCVISEDKTLETVLTN---TVGVAIVDLDTKKFYMGEIPDDDYYSNL 115
L+N S L+ L ++S L+ V N ++G ++ + K+ + E D+D YSNL
Sbjct: 118 LMNPSELNQSGDALVLVS----LKIVNKNEGKSIGYCFINSNIKEIGISEFLDNDLYSNL 173
Query: 116 EAIIVQKSPKECLLP--AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLV 173
E++++Q KE L+P + L+ + K++ ++DR +T + N+F+ +D+ QD+ RL+
Sbjct: 174 ESLLIQIDAKEVLIPTPSNELDPDYTKLIGVIDRCGAVVTEIRSNDFNNKDIEQDLIRLL 233
Query: 174 R----FDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVH 229
F ++ NA L L++A+ +++NYL L+ ++ N F++ + ++++
Sbjct: 234 GDELIFSTGDISNASL----GLSSAS----AILNYLGLLTDDSNFGSFNLKNHTLNQFMK 285
Query: 230 MSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERH 289
+ SA + +L++ P ST+ ++ +L+ C++ G RLL QW+KQPL ++D I++RH
Sbjct: 286 LDSAAVKALNLFPSSKSTNGSKNSNVFDLLNHCKSIGGTRLLHQWIKQPLIEIDEILQRH 345
Query: 290 AAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK-KAGLKDCYRVYEGVSQLPKLIS 348
V LV +T+ R +LH+ + +PD++ L ++ + A L+D R+Y+ + ++P+++
Sbjct: 346 QLVGCLVEDTQLRTSLHDDLMNSIPDIRKLNKKLNKSIYANLEDVVRIYQFLIKIPEILE 405
Query: 349 ILESLVQNVEASNLNTI---------------LSSLQSL-------KMMDRK-------- 378
+LES + E+ L + L LQ L + +DR
Sbjct: 406 LLESKINETESLELKGLIELHWVSPLKELMNPLLKLQELVETTVDLENLDRHEFVIKPDY 465
Query: 379 DAVMDKMKEYL---ESTAR--------RLNLVADKTIKLE-NSPQGFAYRITMKLNNSI- 425
D ++ K +E L EST R L L +K +KLE + G+ R+T SI
Sbjct: 466 DEILLKYRERLDEIESTIRSIHADVADELGLDPEKKLKLELHQNHGWCMRLTRTEERSIR 525
Query: 426 -DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQ 484
++ L TV+ GV F + + + + IQ +Y Q+S+V+E+I I+A Y+ L +
Sbjct: 526 GKSKFIELQTVKAGVFFTTEEMKDISLESSEIQAKYNKQQRSLVKEIISITATYSPVLEK 585
Query: 485 LSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT--GSLVLNQCRHPIVELQGGVSYIP 542
LS +L+ DVL SF+ S+ AP PY++P M P+ + G ++ + RHP VE+Q GV++I
Sbjct: 586 LSLILSHLDVLTSFAHVSSYAPVPYIKPKMYPLNSTEGKTIVKEARHPCVEMQDGVTFIA 645
Query: 543 NDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRV 602
NDV E F ++TGPNMGGKSTYIR IG +AQIGCFVP A + V D I RV
Sbjct: 646 NDVELVKNETEFLIITGPNMGGKSTYIRQIGTISLIAQIGCFVPATEAELCVFDAILARV 705
Query: 603 GAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELAS 662
GA DSQ +G+STFMMEM ETA++++ + NSL+IIDELGRGTST+DGFG+A +I+ +A+
Sbjct: 706 GAGDSQLKGVSTFMMEMLETASILQTASSNSLIIIDELGRGTSTYDGFGLAWAISEFIAT 765
Query: 663 HRQPFTLFATHFHEIALLSRVIPTFRNVQVSA-LEQEDN----LVLLYQVKPGSCVKSYG 717
FT+FATHFHE+ LS + +N+ V A +E N + LLY+V+PG +S+G
Sbjct: 766 KLNCFTIFATHFHELTKLSDKLNKVKNLHVVAHVESNSNTSSDITLLYKVEPGISDQSFG 825
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYEYSLDTK 748
+H A++ +P ++ A+ E E D K
Sbjct: 826 IHVAEVVKFPGKIVSMAKRKAAELEEYNDNK 856
>gi|326477897|gb|EGE01907.1| DNA mismatch repair protein msh-2 [Trichophyton equinum CBS 127.97]
Length = 942
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 251/708 (35%), Positives = 391/708 (55%), Gaps = 60/708 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+PAE + K+ I D
Sbjct: 157 VGVCFADASVRELGVSEFVDNDLYSNFESLLIQLGVKECLIPAEGQKKDVELAKLRQIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T R + F +D+ QD++RL++ D++ +LP+ L A +LI+YL
Sbjct: 217 SCGVAITERPVSAFGTKDIEQDLSRLLK-DET---GPAMLPQTDLKLAMGSASALISYLN 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D ++Y+ + ++ + +L+++P G + SL G+L+ C+TP
Sbjct: 273 AMSDPSNFGQYQLYKHDLAQYMKLDASALRALNLMP--GPRDSMKNMSLYGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 331 GGRLLAQWLKQPLMNHKDIEKRQQLVEAFVIDTELRQTMQENHLRSIPDLYRLAKRFQRG 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ------------------NVEASNLNTILSS 368
KA L+D RVY+ V ++P I+ E ++ + + L ++ +
Sbjct: 391 KANLEDVVRVYQVVIRIPGFINSFEGVMDEQYQTPLDAEYTDKLRKLSQDLGKLAEMVET 450
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L+ +D + + +DK++ ++S RR L +K + LEN
Sbjct: 451 TVDLEALDNHEFIIKPEFDDSLRIIRKKLDKLRHDMDSEHRRVGRDLGQDTEKKLFLENH 510
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I ++ Y T + GV F + ++ + Y Q
Sbjct: 511 RVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSMNYNRTQTG 570
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ ++A Y L QL+ +LA DV+VSF+ S AP YVRP + P GTG+ +L +
Sbjct: 571 LVSEVVNVAASYCPLLEQLAGILAHLDVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKE 630
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +++I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 631 ARHPCMEMQDDITFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 690
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 691 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 750
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---------- 695
+DGFG+A +I+ + + + F+LFATHFHE+ L P N+ V A
Sbjct: 751 YDGFGLAWAISEHIVTEIKCFSLFATHFHELTALEERYPKAVSNLHVVAFIGDGPAAEGK 810
Query: 696 -EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ AR +E E
Sbjct: 811 QKKKQEVTLLYRVEPGVCDQSFGIHVAELVRFPDKVVNMARQKAEELE 858
>gi|255934164|ref|XP_002558363.1| Pc12g15640 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582982|emb|CAP81191.1| Pc12g15640 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 943
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 261/725 (36%), Positives = 392/725 (54%), Gaps = 70/725 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+ + + KI I D
Sbjct: 157 VGVCFADASVRELGVSEFLDNDIYSNFESLVIQLGVKECLVTMDVARKDVELAKIRAIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ ++ R +F +D+ QD+ RL+R + ++A LP+ L A +LI YL
Sbjct: 217 SCGIAISERPVADFGVKDIEQDLTRLLR----DERSAGTLPQTELKLAMGAASALIKYLN 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
++ + N Q+ ++ D S+Y+ + ++ + +L+++P G SL G+L+ C+TP
Sbjct: 273 VLTDPTNFGQYQLYQHDLSQYMKLDASALRALNLMP--GPRDGAKSMSLFGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL DL AI +R V V NTE R + E LR +PD+ LA R RK
Sbjct: 331 GSRLLAQWLKQPLMDLAAIEQRQQLVEAFVVNTELRQTMQEEHLRAIPDLYRLAKRFQRK 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISIL------------------------ESLVQNVEASNL 362
+A L+D R Y+ +LP +S L +SL E
Sbjct: 391 QANLEDVVRAYQVSIRLPGFVSALSDVMDEQYQTPLEAEYTSKLRGYSDSLAMLEEMVET 450
Query: 363 NTILSSLQ------------SLKMMDRKDAVMDKMKEYLESTARR----LNLVADKTIKL 406
L++L+ SL+++ +K +DK++ ++ +R L+ +K + +
Sbjct: 451 TVDLAALENHEFIIKPEFDDSLRVIRKK---LDKLRYDMDMEHQRVSKDLHQDMEKKLFM 507
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ +R+T I ++ Y T + GV F + + ++ + Y
Sbjct: 508 ENHRVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTANMQSLRREHDQLSSNYNRT 567
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q +V EV+ ++A Y L QL+ VLA DV+VSF+ AS AP YVRP M P GTG+ V
Sbjct: 568 QTGLVNEVVNVAASYCPVLEQLAGVLAHLDVIVSFAHASMHAPSGYVRPKMHPRGTGNTV 627
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GC
Sbjct: 628 LKEARHPCMEMQDDISFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGC 687
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGRG
Sbjct: 688 FVPCTEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRG 747
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSALEQEDN-- 700
TST+DGFG+A +I+ + + + F LFATHFHE+ AL R +N+ V A N
Sbjct: 748 TSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKAVKNLHVVAFIGNGNEG 807
Query: 701 -------------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
+ LLY+V+PG C +S+G+H A++ +P+ ++ AR +E E
Sbjct: 808 ESESETEEKKKRQVTLLYRVEPGICDQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSA 867
Query: 748 KTPSG 752
T G
Sbjct: 868 TTEDG 872
>gi|343429855|emb|CBQ73427.1| probable DNA mismatch repair protein MSH2 [Sporisorium reilianum
SRZ2]
Length = 950
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 281/843 (33%), Positives = 443/843 (52%), Gaps = 128/843 (15%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKSNVVYLVKTM------GQKDKTLETVLVN 61
P+ + T+R F+R +FY HG+DA LI +N+V+ + G KDK L ++ ++
Sbjct: 34 MPKPAPGTLRLFDRSDFYSAHGDDAVLI---ANLVFKTHSALKYLGSGGKDKGLPSITLS 90
Query: 62 ----------------------------------------KSNLSCFSHILCV----ISE 77
NL ++ V +S
Sbjct: 91 VAAAKNFLREALTTRQMRVEIYANAGGKRNNQWTIIKQASPGNLQQMEDMIFVNADIVSS 150
Query: 78 DKTLETVLTN-----TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAE 132
+ LT T+G A D ++ + E ++D +SN E++++Q KEC+LP
Sbjct: 151 PIVMALKLTTRDGVKTIGAAFADASNRELCVTEYAENDLFSNTESLMIQLGVKECILP-- 208
Query: 133 YLNDNKN------KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
D+K K+ +++R V M K+ +F+ +++ QD+ RL+R + S + +
Sbjct: 209 --KDDKGADVDLKKLRDVIERCGVVMFDNKRADFAGKNIDQDLRRLLREESSGVT----I 262
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PE+ L A +LI YL L+ +E N Q++I + D S+Y+ + ++ + +L++ P+ G
Sbjct: 263 PELDLKVAMAAASALITYLALLTDESNFGQYTIRTHDLSQYLRLDNSALRALNLFPEPGQ 322
Query: 247 TSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLH 306
T + S+ G+L+RCRT QG RLL QW+KQPL ++ AI ER V + VN+ AR +
Sbjct: 323 TGSSKNTSVYGLLNRCRTGQGQRLLGQWLKQPLVNVHAIQERQNLVELFVNDNAARQLIQ 382
Query: 307 EYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI------------------- 347
L+ +PDM ++ R + A L+D RVY+ V +LP LI
Sbjct: 383 TDYLKLMPDMHRISKRFQKGVATLEDVVRVYQAVLRLPGLIQTLSDIDTPSEEHAELLAT 442
Query: 348 ----------SILESLVQNVEAS-NLNTIL-----------SSLQSLKMMDRKDAVMDKM 385
S L VEA+ +LN + +L+ +K + D DK+
Sbjct: 443 TYIHPFQLHSSALTKFTALVEATLDLNELAQHNFVIKPDFDDNLRQIK--EALDDTRDKL 500
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQ 442
E + L + +K + LEN G+ R+T + ++ Y+ + TV+GG+ F
Sbjct: 501 DEQHRLAGKELRMDTEKKLHLENHHVYGYCLRVTRTDAGLVRNKKGYSDIATVKGGLYFT 560
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
++ L ++ + Y Q +V+EVI I++ Y L +L+ VLA DV+VSF+ S
Sbjct: 561 NEALRDLANDFKDLSDRYGRSQSGLVKEVIRIASTYCSPLEKLNVVLAHLDVIVSFAHVS 620
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
AP PYV+P + GT + V L + RHP +E+ V++IPND G+ F ++TGPN
Sbjct: 621 DSAPIPYVKPAVSEKGTNADVDLREARHPCLEVMDDVAFIPNDTEMVRGKSEFLVITGPN 680
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPC-DSATISVVDQIFTRVGAADSQYRGISTFMMEMK 620
MGGKSTYIR +G+ +AQIGCFVP A + V D I RVGA DSQ +G+STFM EM
Sbjct: 681 MGGKSTYIRQVGIIALMAQIGCFVPAAQGAKLPVFDCILARVGAGDSQLKGVSTFMAEML 740
Query: 621 ETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALL 680
ETAT++K T +SL+IIDELGRGTST+DGFG+A +I+ +A+H + LFATHFHE+ L
Sbjct: 741 ETATILKTATVDSLIIIDELGRGTSTYDGFGLAWAISEWIATHVRCKCLFATHFHELTNL 800
Query: 681 SRVIPTFRNVQVSA-LEQED-------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+ P RN+ V A +EQ++ ++ LLY+V+PG +S G++ A++A +P ++
Sbjct: 801 ASQQPHVRNLHVVAHVEQKEGGSRQDRDITLLYKVEPGISDQSLGINVAELANFPPSVIA 860
Query: 733 QAR 735
A+
Sbjct: 861 LAK 863
>gi|326473055|gb|EGD97064.1| DNA mismatch repair protein Msh2 [Trichophyton tonsurans CBS
112818]
Length = 935
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/704 (35%), Positives = 390/704 (55%), Gaps = 59/704 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+PAE + K+ I D
Sbjct: 157 VGVCFADASVRELGVSEFVDNDLYSNFESLLIQLGVKECLIPAEGQKKDVELAKLRQIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T R + F +D+ QD++RL++ D++ +LP+ L A +LI+YL
Sbjct: 217 SCGVAITERPVSAFGTKDIEQDLSRLLK-DET---GPAMLPQTDLKLAMGSASALISYLN 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D ++Y+ + ++ + +L+++P G + SL G+L+ C+TP
Sbjct: 273 AMSDPSNFGQYQLYKHDLAQYMKLDASALRALNLMP--GPRDSMKNMSLYGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 331 GGRLLAQWLKQPLMNHKDIEKRQQLVEAFVIDTELRQTMQENHLRSIPDLYRLAKRFQRG 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ------------------NVEASNLNTILSS 368
KA L+D RVY+ V ++P I+ E ++ + + L ++ +
Sbjct: 391 KANLEDVVRVYQVVIRIPGFINSFEGVMDEQYQTPLDAEYTDKLRKLSQDLGKLAEMVET 450
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARRLNLVADKTIKLENSP-QG 412
L+ +D + + +DK++ ++S RR +K + LEN G
Sbjct: 451 TVDLEALDNHEFIIKPEFDDSLRIIRKKLDKLRHDMDSEHRR---DTEKKLFLENHRVHG 507
Query: 413 FAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEE 470
+ +R+T I ++ Y T + GV F + ++ + Y Q +V E
Sbjct: 508 WCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSMNYNRTQTGLVSE 567
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
V+ ++A Y L QL+ +LA DV+VSF+ S AP YVRP + P GTG+ +L + RHP
Sbjct: 568 VVNVAASYCPLLEQLAGILAHLDVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKEARHP 627
Query: 531 IVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
+E+Q +++I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVPC A
Sbjct: 628 CMEMQDDITFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEA 687
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
+++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST+DGF
Sbjct: 688 ELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGF 747
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL-----------EQE 698
G+A +I+ + + + F+LFATHFHE+ L P N+ V A +++
Sbjct: 748 GLAWAISEHIVTEIKCFSLFATHFHELTALEERYPKAVSNLHVVAFIGDGPAAEGKQKKK 807
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ LLY+V+PG C +S+G+H A++ +P+ ++ AR +E E
Sbjct: 808 QEVTLLYRVEPGVCDQSFGIHVAELVRFPDKVVNMARQKAEELE 851
>gi|429857861|gb|ELA32701.1| DNA mismatch repair protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 923
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/711 (35%), Positives = 386/711 (54%), Gaps = 65/711 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVT 143
+VGV D ++ + E D+D +SN EA+++Q +ECL+ + + K+ K+
Sbjct: 150 SVGVCFADASVRELGVSEFLDNDLFSNFEALLIQLGVRECLIQTDKADKAKDPDLTKLKQ 209
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I+ V ++ R EF +D+ QD+ RL++ + + LLP+ L A +LI
Sbjct: 210 IIVNCGVAISERSGGEFGTKDIEQDLARLLK----DERATTLLPQTDLKLAMGSAAALIK 265
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL ++++ N Q+ ++ D S+Y+ + +A + +L+++P G+ SL G+L+ C+
Sbjct: 266 YLGVLHDPSNFGQYQLYQHDLSQYMKLDAAALKALNLMP--GARDGAKTMSLYGLLNHCK 323
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLL+QW+KQPL + I +R V VN+TE R + E LR +PD+ LA R
Sbjct: 324 TPVGSRLLSQWLKQPLMSKEEITKRQQLVEAFVNDTELRQTMQEEHLRSVPDLYRLAKRF 383
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILE------------------------SLVQNVEA 359
R KA L+D R Y+ V +LP + E SLV+ E
Sbjct: 384 QRGKANLEDVVRAYQVVIRLPGFLGTFEGVMDEQYKDPLDEAYTIPLRELSDSLVKLAEM 443
Query: 360 SNLNTILSSLQ------------SLKMMDRKDAVMDKMKEYLE----STARRLNLVADKT 403
L +L SL+++ +K +DK+K ++ +AR L K
Sbjct: 444 VETTVDLDALDNHEYIIKPEFDDSLRIIRKK---LDKLKRDIDQEFSDSARDLKQEVGKK 500
Query: 404 IKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
I LEN G+ R+T + +I ++ Y T + GV F L + ++ + + Y
Sbjct: 501 IFLENHKVHGYCMRLTRQEAGAIRNKSGYQECSTQKNGVYFTTKTLQSLRREFDQLSQNY 560
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
Q S+V EV+G++A Y L +L+ VLA DV+VSF+ S AP YVRP + G G
Sbjct: 561 NRTQSSLVNEVVGVAASYCPVLEKLAGVLANLDVIVSFAHCSVHAPSEYVRPTIHARGQG 620
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+L + RHP +E+Q V +I NDV + SF ++TGPNMGGKSTYIR IGV +AQ
Sbjct: 621 QTILKEARHPCLEMQDDVQFITNDVSLTRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQ 680
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDEL
Sbjct: 681 IGCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDEL 740
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST+DGFG+A +I+ + F +FATHFHE+ L+ P N+ V+A N
Sbjct: 741 GRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADEHPEVHNLHVAAHISGGN 800
Query: 701 ---------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ LLY+V+ G C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 801 EGGENTKREVTLLYKVEDGVCDQSFGIHVAELVRFPDKVVRMAKRKADELE 851
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 HKFYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT 54
H F FF P + T+R F+R ++Y HGEDA I R +V+T+G+ DKT
Sbjct: 13 HGFIRFFKSLPTVHEDTVRIFDRGDWYTAHGEDANFIARTVYKTTSVVRTLGRDDKT 69
>gi|392587833|gb|EIW77166.1| DNA mismatch repair protein [Coniophora puteana RWD-64-598 SS2]
Length = 960
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 292/929 (31%), Positives = 463/929 (49%), Gaps = 138/929 (14%)
Query: 3 FYLFF--FPQKSKTT--IRFFNRVEFYCVHGEDA-------------------------- 32
F FF P+KS T +R F+R +FY HG DA
Sbjct: 23 FVSFFSKLPKKSPETGTVRLFDRGDFYSTHGSDALFVAANVFRTNSVIKHLGSRAAGGGL 82
Query: 33 ----------------ELIQRKSNVVYLVKTMGQKDKTLETVL---VNKSNLSCFSHIL- 72
L R+ V V GQ K + VL + NL +L
Sbjct: 83 ASVTLSRTLAHAFLREALTARQLRVEIWVPAPGQGKKAAKFVLDKEASPGNLQPVEDLLF 142
Query: 73 -------------CVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAII 119
+S ++ T VG+A D T++ + + D+D +SN E++I
Sbjct: 143 GNTDVLSAPIVMALRLSTTPAVDKTRTKGVGIAYADTSTRELGVADFVDNDLFSNTESLI 202
Query: 120 VQKSPKECLLPAEYLNDNK------NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLV 173
+Q S KE L+P ++ N NK+ + +R V +T RK ++F+ +++ + RL+
Sbjct: 203 IQLSVKEALIPTGTISGNTDRDLDLNKLKAVFERCGVIVTERKPSDFTGKNVEDHLQRLL 262
Query: 174 RFDDSELKNARLLPEMCLTT--ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMS 231
++ + P+ T A+ L +LI+YL L ++ N + + + D ++Y+ +
Sbjct: 263 PAPSADSSSD---PQQLETPPGASAALGALISYLGLASDPANEGAYILRTHDLARYMRLD 319
Query: 232 SAVMSSLHVLPQQGST-SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHA 290
++ + +L++ GS S +LLG+L++C+T QG RLL W+KQPL +L I +R
Sbjct: 320 ASALRALNLTEVPGSGGSINKNATLLGLLNKCKTAQGTRLLGTWLKQPLVNLHEIRQRQN 379
Query: 291 AVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL 350
V + VN+ R L + L+ +PDM ++ R + A L+D RVY+ ++ L+ L
Sbjct: 380 LVEVFVNDANGRRTLQDEYLKYMPDMHRISKRFKKSNASLEDVVRVYQVTLKMAGLLETL 439
Query: 351 ESLVQNVEASNLNTILSSL--------------------QSLKMMD--------RKD--- 379
E+L ++E ++ L Q+L + + R D
Sbjct: 440 ETL--DIEDDEYKALIKELYLGPLQQFNENLSKYGEMVEQTLDLSELDNHNYAIRPDYDP 497
Query: 380 ----------AVMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--D 426
+ D + E L L DK + LENS Q G+ +R+T + +
Sbjct: 498 RLQELAEKLMEIRDGLDEQHRDAGNDLRLELDKKLHLENSQQYGYCFRLTKNDAKVMMKN 557
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+Y L T++ GV F +L + +Q EY Q +V+EV+ I++ YT L L
Sbjct: 558 KKYIELGTIKSGVFFTTKKLKEFSGDFQETTAEYGRAQSGLVKEVVSIASTYTPVLESLD 617
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVY 546
VLA DV+ SF+ S AP+PYV+P + G LVL RHP +E+Q +S+IPNDV
Sbjct: 618 MVLAHLDVITSFAHVSMNAPEPYVKPIVSEKGASGLVLKDARHPCLEVQDDISFIPNDVE 677
Query: 547 FKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAAD 606
E F ++TGPNMGGKSTYIR +GV +AQIGCFVPC A + + D I RVGA D
Sbjct: 678 MAKDEGEFLIITGPNMGGKSTYIRQVGVIALMAQIGCFVPCSEARMPIFDSILCRVGAGD 737
Query: 607 SQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQP 666
+Q +G+STFM EM ETA++++ +++SL+IIDELGRGTST+DGFG+A +I+ +AS +
Sbjct: 738 NQLKGVSTFMAEMLETASILRSASKDSLIIIDELGRGTSTYDGFGLAWAISEHIASEIRA 797
Query: 667 FTLFATHFHEIALLSRVIPTFRNVQVSA--------LEQEDNLVLLYQVKPGSCVKSYGV 718
F +FATHFHE+ L + + +N+ V A Q+ ++ LLY+V+PG +S+G+
Sbjct: 798 FCMFATHFHELTALDQELKHVKNLHVVAHVSQEAQSSTQDQDITLLYKVEPGVSDQSFGI 857
Query: 719 HCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQ 778
H A++A +PE++++ A+ E E D T D+ + E Q+G + + L+
Sbjct: 858 HVARLANFPENVVKLAKRKADELE---DFNTTRTDQQFSEE-----VTQQGVELVEELLR 909
Query: 779 QCLSLSKQKDTNRILHLQETQEPGIEEYQ 807
+ S SKQ D ++ T E +EE +
Sbjct: 910 KFASSSKQ-DGEDVMMDDPTPEEQLEELK 937
>gi|346327086|gb|EGX96682.1| DNA mismatch repair protein MSH2 [Cordyceps militaris CM01]
Length = 930
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 284/851 (33%), Positives = 423/851 (49%), Gaps = 120/851 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKSNVVY----LVKTMGQKDKT-L 55
F FF P + T+R F+R ++Y HG+DA I +N VY +V+ +G+ D T L
Sbjct: 16 FIRFFKSLPAPNDDTVRIFDRGDWYTSHGDDANYI---ANTVYKTTSVVRQLGRNDHTGL 72
Query: 56 ETVLV---------------------------NKSNLSC-------------------FS 69
+V + + N C F
Sbjct: 73 PSVTMTVTVFRQFLREALFKLGRRVEIWQSPNGRMNWRCAKQASPGNLQDVEDDLGGQFE 132
Query: 70 HILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
++S + VGV D ++ + E D+D YSN EA+++Q +ECLL
Sbjct: 133 SAPMIMSVKISTRASEARAVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVRECLL 192
Query: 130 PAEYLNDNKN----KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL 185
P + +K+ K+ ILD V + R +F D+ QD+ RL++ E A L
Sbjct: 193 PQDKSEKDKDPELAKLRQILDSCGVAIAERPAADFGIRDIDQDLARLLK---DETATA-L 248
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG 245
LP+ L A SLI YL ++ + N Q+ ++ D ++++ + +A + +L+++P G
Sbjct: 249 LPQTDLKLAMGSAASLIKYLSILQDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMP--G 306
Query: 246 STSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
S+ G+L+ C+TP G RLLAQW+KQPL D I +R V V +TE R +
Sbjct: 307 PRDGAKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMSKDEIEKRQQLVEAFVTDTELRQTM 366
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-------- 357
E LR +PD+ L+ R R KA L+D R Y+ + +LP + LE ++
Sbjct: 367 QETHLRSVPDLYRLSKRFQRNKADLEDVVRAYQVIIRLPGFLGTLEGVMDEAYRDPLDAA 426
Query: 358 ---EASNLNTILSSLQS-------LKMMDRK-------------------DAVMDKMKEY 388
+ +L+ L LQ L +DR DA+ ++
Sbjct: 427 YTSKLRDLSDSLGRLQDMVEQTVDLDALDRHEYIIKPDYDAGLRIIRKKLDALDRNIRAE 486
Query: 389 LESTARRLNLVADKTIKLENSPQ--GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDD 444
+ A L ADK I LE S + G R+T + + I +R Y T + GV F
Sbjct: 487 FQEAAADLGQEADKKIFLETSHKVHGVCMRLTRQEASCIRNRAQYQECSTQKNGVYFTTK 546
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+L ++ + + Y Q +V EV+ ++A Y L +L+ VLA DV+VS + +
Sbjct: 547 KLQAYRREHDQLSQNYNRTQSGLVHEVVQVAASYCPVLERLAGVLAHLDVIVSLAHCAVH 606
Query: 505 APKPYVRPCMKP-MGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP+ YVRP M P G G L RHP +ELQ V +I NDV SF ++TGPNMG
Sbjct: 607 APEVYVRPTMHPPGGQGQTRLVGARHPCLELQDDVQFITNDVTLTRDASSFLIITGPNMG 666
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR IG LAQIG FVPC SA +++ D + RVGA+DSQ +G+STFM EM ETA
Sbjct: 667 GKSTYIRQIGAIALLAQIGSFVPCTSAELTIFDAVLARVGASDSQLKGVSTFMAEMLETA 726
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
++K T +SL+IIDELGRGTST+DGFG+A +I+ + + F LFATHFHE+ L+
Sbjct: 727 NILKSATADSLIIIDELGRGTSTYDGFGLAWAISEHIVKEIRCFALFATHFHELTALADQ 786
Query: 684 IPTFRNVQVSA-LEQEDN-----------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDML 731
P N+ V+A + D + LLY+V+PG C +S+G+H A++ +P+ ++
Sbjct: 787 HPNVANLHVTAHIGGADGGKNGDDGAKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVV 846
Query: 732 EQARDLMKEYE 742
A+ E E
Sbjct: 847 RMAKRKADELE 857
>gi|389640915|ref|XP_003718090.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae 70-15]
gi|351640643|gb|EHA48506.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae 70-15]
gi|440475156|gb|ELQ43857.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae Y34]
gi|440487085|gb|ELQ66891.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae P131]
Length = 924
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 270/758 (35%), Positives = 398/758 (52%), Gaps = 67/758 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
VGV D ++ + E D+D +SN EA+++Q KECL+ + D K+ K+ I
Sbjct: 150 VGVCFADASVRELGVSEFLDNDLFSNFEALLIQLGVKECLIQYDKAEDLKDPDLAKLKQI 209
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+D V M+ R +F D+ QD+ RL++ + ++A LLP+ L A +LI Y
Sbjct: 210 IDNCGVAMSERPMADFGTRDIEQDLARLLK----DERSASLLPQTDLKLAMGAASALIKY 265
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRT 264
L ++ + N Q+ + D S+++ + +A + +L++ P G+ SL G+L+ C+T
Sbjct: 266 LNVLQDPSNFGQYQLFQHDLSQFMKLDAAALKALNLTP--GARDGSKTMSLYGLLNHCKT 323
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG 324
P G RLLAQW+KQPL D I R V +N+TE R + E LR +PD+ LA R
Sbjct: 324 PVGSRLLAQWLKQPLMSKDEIEGRQQLVEAFMNDTELRQTMQEEHLRSIPDLYRLAKRFQ 383
Query: 325 RKKAGLKDCYRVYEGVSQLPKLISILE------------------------SLVQNVEAS 360
RKKA L+D R Y+ V +LP I LE SLV+ E
Sbjct: 384 RKKANLEDVVRAYQVVIRLPGFIGTLEGVMDEAYRDPLDVAYTTKLRELSDSLVRLQEMV 443
Query: 361 NLNTILSSLQS------------LKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIKLE 407
L +L++ L+++ +K D + +M A L +K I LE
Sbjct: 444 ETTVDLDALENHEFIIKLEFDDGLRIIRKKLDRIRTEMDREFSKAADDLGQEKEKKIFLE 503
Query: 408 NSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
N GF R+T I + Y T + GV F L + ++ + + Y Q
Sbjct: 504 NHKVHGFCMRLTRTEAGCIRNNSGYQECSTQKNGVYFTTKHLQSLRREFDQLSQSYNRTQ 563
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
S+V EV+ ++A Y L L+ +LA DV+VSF+ S AP YVRP + P G G +L
Sbjct: 564 SSLVNEVVSVAASYAPLLENLAGILAHLDVIVSFAHCSMHAPISYVRPKIHPRGQGRTLL 623
Query: 525 NQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RHP +E+Q V +I NDV SF ++TGPNMGGKSTYIR IGV +AQIGCF
Sbjct: 624 REARHPCLEVQDDVQFITNDVELDRSGSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCF 683
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGT
Sbjct: 684 VPCSEAELTIFDAILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGT 743
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA---------- 694
ST+DGFG+A +I+ + LFATHFHE+ L+ N+ V+A
Sbjct: 744 STYDGFGLAWAISEHIVVEIGCSALFATHFHELTALAEQHKQVANLHVTAHISGTGDDAK 803
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDE 754
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E D T D
Sbjct: 804 ADEKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE---DFTTKHND- 859
Query: 755 TNNREEEYFK-TVQEGEYQMFDFLQQCLSLSKQKDTNR 791
N +Y K V++G ++ + L Q K D +R
Sbjct: 860 --NLGLQYSKDDVEQGSARLKEILVQWKEEVKAGDMSR 895
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 1 HKFYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVVYLVKTMGQKDKT 54
H F FF P K TIR F R ++Y HGEDA LI R KS V V+ +G+ D T
Sbjct: 13 HGFIRFFKSLPAAHKDTIRIFFRGDYYTAHGEDANLIARTVYKSTSV--VRQLGRSDHT 69
>gi|452840462|gb|EME42400.1| hypothetical protein DOTSEDRAFT_54773 [Dothistroma septosporum
NZE10]
Length = 923
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 282/842 (33%), Positives = 429/842 (50%), Gaps = 124/842 (14%)
Query: 10 QKSKTTIRFFNRVEFYCVHGEDAELIQR-KSNVVYLVKTMGQKDKTLETVLVNKSNLSCF 68
QK TIR F+R +F HG+DAE I R + ++KT+G K L++V + + F
Sbjct: 25 QKPTDTIRIFDRGDFLSAHGDDAEYIARMQYKTTSVLKTLG---KNLQSVTMTVTVFRTF 81
Query: 69 ------------------------------------------SH------ILCVISEDKT 80
H IL V K
Sbjct: 82 LREAIFRLGRRVEVLQTSGRNQWKVVKQASPGNLQDIEDDLGGHVESAPIILAVKVSSKA 141
Query: 81 LETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-- 138
E VGV D ++ + E D+D YSN E++I+Q KECL+ + +
Sbjct: 142 NEA---RNVGVCFADASVRELGVSEFVDNDIYSNFESLIIQLGVKECLVQVDMTKKDAEL 198
Query: 139 NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCL 198
+K+ TI D ++ R +F ++D+ QD+ RL+R + K LP+ L A
Sbjct: 199 HKLRTIADNCNCAVSERPAGDFGKQDIEQDLTRLLR----DEKAGASLPQTDLKLAMGSA 254
Query: 199 RSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGI 258
+LI YL +M++ N Q+ ++ D S+Y+ + S+ + +L+++P G +L G+
Sbjct: 255 AALIKYLGIMSDVSNFGQYQLYQHDLSQYMKLDSSALKALNLMP--GPRDGAKTMNLYGL 312
Query: 259 LDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQS 318
L+ C+TP G RLLAQW+KQPL + I R V VN+TE R L E LR +PD+
Sbjct: 313 LNSCKTPVGSRLLAQWLKQPLMSQEEIERRQQLVEAFVNDTELRQTLQEEHLRSIPDLYR 372
Query: 319 LAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQN--------------VEASN--- 361
LA + RKKA L+D R Y+ +LP I E ++ +E SN
Sbjct: 373 LAKKFQRKKATLEDVVRAYQVALRLPDFIGTFEGVMDEAYKDALDQEYTNKLLEFSNSFG 432
Query: 362 -LNTILSSLQSLKMMDRKDAV---------------MDKMKEYL----ESTARRLNLVAD 401
L ++ + L+ MD + + +DK++ + + LN +
Sbjct: 433 KLLEMVETTVDLEAMDNHEFIIKSEFDDTLRVIRKKLDKLRYEIDREHQDVGADLNQDTE 492
Query: 402 KTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQR 458
K + LEN G+ R+T + I ++ Y + T + GV F +LA ++ +
Sbjct: 493 KKLLLENHRVHGWCLRLTRNEASVIRNKKKYQEISTQKNGVYFTTTKLAEMRREFDQLSE 552
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
Y Q +V EV+ ++A Y + +L+ VLA DV+VSF+ S AP Y+RP + P G
Sbjct: 553 NYNRTQSGLVNEVVNVAASYCPVIEKLAGVLAHLDVIVSFAHVSVHAPTAYIRPKIHPRG 612
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
TGS +L + RHP +E+Q V +I NDV E F ++TGPNMGGKSTYIR IGV +
Sbjct: 613 TGSTILKEARHPCMEMQDDVQFITNDVSLVREESEFLIITGPNMGGKSTYIRQIGVIALM 672
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQIGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T+ SLVIID
Sbjct: 673 AQIGCFVPCSEAELTLFDCILARVGASDSQLKGVSTFMAEMLETSNILKTATKESLVIID 732
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ----VSA 694
ELGRGTST+DGFG+A +I+ + +++FATHFHE L+ ++ T+R VQ V+
Sbjct: 733 ELGRGTSTYDGFGLAYAISEHIIKEIGCYSMFATHFHE---LTSLVATYRQVQNLHVVAH 789
Query: 695 L-EQEDNLV-------------LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
+ + ED+++ LLY+V PG +S+G+H A++ +P+ ++ A+ E
Sbjct: 790 MGDGEDSVMDGDSHTSRRREVTLLYKVVPGISDQSFGIHVAELVRFPQKVVNMAKRKADE 849
Query: 741 YE 742
E
Sbjct: 850 LE 851
>gi|322697506|gb|EFY89285.1| DNA mismatch repair protein MSH2 [Metarhizium acridum CQMa 102]
Length = 922
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 277/846 (32%), Positives = 425/846 (50%), Gaps = 116/846 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT-LETV 58
F F+ P + TIR F+R ++Y HG++A I + +++ +G+ D T L +V
Sbjct: 15 FIRFYKSLPDVGEDTIRIFDRGDWYTAHGDNASFIAKTVYKTTSVLRQLGRNDHTGLPSV 74
Query: 59 LV---------------------------NKSNLSCFSH--------------------- 70
+ + N C
Sbjct: 75 TMTVTVFRQFLREALFKLGKRIEIWESPSGRMNWKCVKQASPGNLQDIEDDLGGQIESAP 134
Query: 71 -ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
I+ V K E + VGV D ++ + E D+D YSN E++++Q +EC++
Sbjct: 135 MIIAVKISAKASEARI---VGVCFADASVRELGVSEFLDNDLYSNFESLLIQLGVRECVI 191
Query: 130 PAEYLNDNKN----KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL 185
+ + +K+ K+ I+D V + R +F D+ QD+ RL++ D K+ L
Sbjct: 192 QLDKGDKDKDPELAKLRQIIDNCGVAIAERPAGDFGTRDIEQDLARLLKDD----KSVNL 247
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG 245
LP+ L A SLI YL ++ + N Q+ ++ D ++++ + +A + +L+++P G
Sbjct: 248 LPQTDLKLAMGSAASLIKYLGVLQDPSNFGQYHLYQHDLAQFMKLDAAALKALNLMP--G 305
Query: 246 STSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
S+ G+L+ C+TP G RLLAQW+KQPL D D I +R V +TE R +
Sbjct: 306 PRDGSKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMDKDEIEKRQQLVEAFFTDTELRQTM 365
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR +PD+ L+ R R KA L+D R Y+ V +LP I E ++ L+
Sbjct: 366 QEEHLRSVPDLYRLSKRFQRGKANLEDVVRAYQVVIRLPGFIGTFEGVMDEAYRDPLDAA 425
Query: 366 -----------LSSLQS-------LKMMDRKDAVM--------------------DKMKE 387
L LQ L +DR + ++ D E
Sbjct: 426 YTTKLRELSDNLGKLQDMVEQTVDLDALDRHEYIIKSEYDQGLQTIRKKLDQLDRDIRAE 485
Query: 388 YLESTARRLNLVADKTIKLENSPQ--GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQD 443
+ E+ AR L ADK I LE S + G R+T + I ++ Y T + GV F
Sbjct: 486 FHEA-ARDLGQEADKKIFLETSHKVHGVCMRLTRQEAGCIRNKSSYQECSTQKNGVYFTT 544
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
++ + +Y + + Y Q S+V EV+ +++ Y L +L+ VLA DV+VS + S
Sbjct: 545 KKMQSYRREYDQLSQNYNRTQSSLVNEVVHVASSYCPVLERLAGVLAHLDVIVSLAHCSV 604
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP+ YVRP + G G L RHP +ELQ V +I ND+ F + SF ++TGPNMG
Sbjct: 605 HAPEAYVRPKIHTRGEGQTRLIGARHPCMELQDDVQFITNDLEFTRDKSSFLIITGPNMG 664
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR GV +AQ+GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA
Sbjct: 665 GKSTYIRQAGVIALMAQVGCFVPCAEAELTIFDSILARVGASDSQLKGVSTFMAEMLETA 724
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
++K T+ SL+IIDELGRGTST+DGFG+A +I+ + F +FATHFHE+ L+
Sbjct: 725 NILKSATKESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADQ 784
Query: 684 IPTFRNVQVSAL---EQEDN----LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
P RN+ V+A +DN + LLY+V+PG C +S+G+H A++ +P+ ++ A+
Sbjct: 785 YPQVRNLHVTAHISGTGKDNNKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKR 844
Query: 737 LMKEYE 742
E E
Sbjct: 845 KADELE 850
>gi|164655966|ref|XP_001729111.1| hypothetical protein MGL_3578 [Malassezia globosa CBS 7966]
gi|159103001|gb|EDP41897.1| hypothetical protein MGL_3578 [Malassezia globosa CBS 7966]
Length = 947
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/711 (36%), Positives = 404/711 (56%), Gaps = 60/711 (8%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTI 144
N VG A D ++F + E + D +SN E++I+Q KEC+LP + + N K+ ++
Sbjct: 166 NQVGAAFADATNREFGIAEYAETDLFSNSESLIIQLGVKECVLPTDEAGSDYNLQKLRSM 225
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
++R +T ++ F + + +D+ RL+ + L ++ +T+A+ +LI+Y
Sbjct: 226 IERCGCVITEVRRGLFVNKSVEEDILRLLPSSQQATLTSNLNKKLAMTSAS----ALISY 281
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD--SLLGILDRC 262
L L+ +E N +F++ S D S+Y+ M +A + +L++ P ++ T SL G+L+ C
Sbjct: 282 LNLLGDESNFGKFTLCSHDLSEYLRMDNAALRALNLFPDPHGQASGTNKGASLFGLLNHC 341
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
+T QG R+L QW+KQPL +L AI R + ++IL+++ EAR L + L+ +PDM + R
Sbjct: 342 KTAQGIRMLNQWLKQPLVNLHAIQNRQSMLSILLDDPEARHRLQDDFLKYMPDMLRIGKR 401
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILES--------------------------LVQN 356
R A L+D R Y+ V ++P L +L S LV+
Sbjct: 402 FQRGVATLEDVVRCYQAVIKIPDLTQVLRSIAIVSEADCALFHSTFVAPLDELYQHLVKL 461
Query: 357 VEASNLNTILSSLQ------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKT 403
VE + L LQ +L+++ K D + D++ E L L +K
Sbjct: 462 VEMVEMTLDLDELQYHNYVIKPEFDETLRLIRTKLDVIRDQLDEQHIQVGHDLRLDTEKK 521
Query: 404 IKLEN-SPQGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+ LEN S G+ +R+T + +R Y L TV+GG+ F + N +++++ +Y
Sbjct: 522 LHLENHSSYGYCFRVTRTDAGVVKNRNGYLDLSTVKGGLYFTTPSVRELNDEFRSLSEDY 581
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ Q +V++VI I++ YT L L+ V+A DV+VS + S+ AP PY RP ++ G+
Sbjct: 582 ASTQSRLVKDVIDIASSYTPPLEHLNVVVAHLDVIVSLAHVSSNAPIPYTRPELRERGS- 640
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
SLVL RHP +E+Q + +IPNDV E F +VTGPNMGGKSTY+R IGV +AQ
Sbjct: 641 SLVLRDSRHPCLEVQDDIHFIPNDVSMVPNESEFLVVTGPNMGGKSTYLRQIGVITLMAQ 700
Query: 581 IGCFVPCDS-ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
IGCFVP + A I + D I RVGA DSQ RGISTFM EM ETAT++K T +SLV+IDE
Sbjct: 701 IGCFVPAAAGAQIPICDCILARVGAGDSQLRGISTFMAEMLETATILKSATRDSLVLIDE 760
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA----- 694
LGRGTST+DGFG+A +I+ + + +FATHFHE+ L+R +P N+ V A
Sbjct: 761 LGRGTSTYDGFGLAWAISEYMVTQIHCKCVFATHFHEMTSLARKLPGVENLHVVAHVTPR 820
Query: 695 ---LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ + ++ LLY+V+PGS +SYG+ A++A +PED++ A+ +E E
Sbjct: 821 ENGSQFDKDITLLYKVEPGSSDQSYGIQIAELADFPEDVIRLAKRKAEELE 871
>gi|398396998|ref|XP_003851957.1| hypothetical protein MYCGRDRAFT_72798 [Zymoseptoria tritici IPO323]
gi|339471837|gb|EGP86933.1| hypothetical protein MYCGRDRAFT_72798 [Zymoseptoria tritici IPO323]
Length = 936
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 285/842 (33%), Positives = 428/842 (50%), Gaps = 119/842 (14%)
Query: 11 KSKTTIRFFNRVEFYCVHGEDAELIQR-KSNVVYLVKTM--------------------- 48
K TIR F+R +F HG+DA+ I R + ++KT+
Sbjct: 26 KPTDTIRIFDRGDFLSAHGDDADFIARVQYKTTSVLKTLGRNPGLPSVTMTVTVYRTFLR 85
Query: 49 ------GQKDKTLETVLVNK---------SNLSCFSH-----------ILCVISEDKTLE 82
G++ + L+T N NL IL V K E
Sbjct: 86 DAIFRLGKRVEVLQTSGRNAWKVAKQASPGNLQDIEEDLGGHVESAPIILAVKVSSKANE 145
Query: 83 TVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NK 140
VGV D ++ + E D+D YSN E++I+Q KECL+ + + +K
Sbjct: 146 G---RNVGVCFADASVRELGVSEFVDNDVYSNFESLIIQLGVKECLIQIDSTKKDAELSK 202
Query: 141 IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
+ TI D ++ R +F+ D+ QD+ RL+R + S + LP+M L A +
Sbjct: 203 LRTIADNCNCAVSERPSGDFANRDIEQDLTRLLRSETS----SGTLPQMDLKVAMSSAAA 258
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILD 260
LI YL +M++ N ++ ++ D ++Y+ + S+ + +L+++P G +L G+L+
Sbjct: 259 LIKYLGIMSDPSNFGEYKLYQHDLTQYMKLDSSALKALNLMP--GPRDGSKTMNLYGLLN 316
Query: 261 RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLA 320
C+TP G RLLAQW+KQPL L+ I +R V VN+T+ R L E +R +PD+ LA
Sbjct: 317 HCKTPVGSRLLAQWLKQPLMSLEDIEKRQTLVEAFVNDTQLRQTLQETHMRSIPDLYRLA 376
Query: 321 MRIGRKKAGLKDCYRVYEGVSQLPKLISILES---------------------------L 353
+ RKKA L+D R Y+ +LP I E+ L
Sbjct: 377 KKFQRKKADLQDVVRTYQVAIRLPGFIEAFENAADESCKPALDSEYADKLRDYSGSFDKL 436
Query: 354 VQNVEAS-NLNTILSSL--------QSLKMMDRK-DAVMDKMKEYLESTARRLNLVADKT 403
V+ VE++ +L+ I + +L+++ RK D+V + + L+L +K
Sbjct: 437 VEMVESTVDLDAIDNHEYIIKPEFDDTLRIIRRKLDSVQYNINKEHSRVGDDLSLDTEKK 496
Query: 404 IKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+ LEN G+ R+T + I ++ YT L T + G F L+ +++ + Y
Sbjct: 497 LLLENHRIHGWCLRLTRNEASVIRNKKSYTELATQKNGTYFTTSTLSDLRREFEQLNENY 556
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
Q +V EV+ ++A Y + +L+ VLA DV VSF+ S AP Y RP + P GTG
Sbjct: 557 TRTQTGLVAEVVNVAASYCPVIEKLAAVLAHLDVCVSFAHVSVHAPIAYTRPKIHPRGTG 616
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
S VL + RHP +E+Q VS+IPNDV + SF L+TGPNMGGKSTYIR IGV +AQ
Sbjct: 617 STVLKEARHPCLEMQDDVSFIPNDVSMTREDSSFLLITGPNMGGKSTYIRQIGVIALMAQ 676
Query: 581 IGCFVPC-DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
+GCFVPC + A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SLVIIDE
Sbjct: 677 VGCFVPCAEGAELTLFDCILARVGASDSQLKGVSTFMAEMLETANILKTATRESLVIIDE 736
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA----L 695
LGRGTST+DGFG+A +I+ + FT+FATHFHE+ L P +N+ V A
Sbjct: 737 LGRGTSTYDGFGLAWAISEHIIKEIGSFTMFATHFHELTALKDEYPQVQNLHVVAHIGDS 796
Query: 696 EQEDN---------------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
E N + LLY+V PG +S+G+H A++ +P +++ A+ E
Sbjct: 797 PAESNGDVAMGGTGAGRGGEVTLLYKVVPGISDQSFGIHVAELVRFPRKVIDMAKRKADE 856
Query: 741 YE 742
E
Sbjct: 857 LE 858
>gi|391347199|ref|XP_003747852.1| PREDICTED: DNA mismatch repair protein Msh2-like [Metaseiulus
occidentalis]
Length = 908
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/700 (36%), Positives = 403/700 (57%), Gaps = 56/700 (8%)
Query: 82 ETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKI 141
E+VL +GVA D ++ + +I D+ + L+ +++Q SPKE ++P + +K+
Sbjct: 148 ESVL---IGVAFCDPVLQRLKVTQILDNTMLTKLQVLLIQISPKEMVIPTKM----DDKL 200
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
+L RN + + F++++L QD+ ++ +F + KN ++LPE+ + A L +L
Sbjct: 201 HKLLRRNNITFYEVAADHFNDKNLEQDLEKIYKFGKKQAKNIQILPELLVQQARKPLAAL 260
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
+ +L L ++ + +QFS+ + + + +A + +LH+LP D++ GIL R
Sbjct: 261 LKFLNLASSPSSFSQFSLQELKPDTLMRLDAAAVHALHLLP---VNELAKEDTIYGILCR 317
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
RTP G RLL++W+KQPL D I ER V VN+ E R +LHE LR PD+ +A
Sbjct: 318 ARTPGGQRLLSEWIKQPLIDPAKIEERLDIVEFFVNSNEVRHSLHEDFLRRFPDLHIMAK 377
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL-----KMMD 376
++ +KK L D Y++Y V L +L +L Q AS + I+ SLQ + K ++
Sbjct: 378 KLHQKKVRLSDLYKLYTIVRSLS---PVLSTLPQGECASLDDLIVKSLQGMTKDFEKYVE 434
Query: 377 RKDAVMD--------------------------------KMKEYLESTARRLNLVADKTI 404
+ V+D + ++ L A+ L++ K I
Sbjct: 435 MIEQVIDIERAESKMEFLVMPSFDEALKEINDRIVDCEKQAEKLLTKAAQTLSVEKGKVI 494
Query: 405 KLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
KL+ + GF +R++ K N I + + I D GV F + L N++Y A + +Y+
Sbjct: 495 KLDYATDGGFVFRVSKKEYNRIKTQRAFDIADVKNNGVSFSNGELRDLNSEYVAAKSDYK 554
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
T Q+++V +++ +++GY+ L QL+D ++Q D LV ++A+ YVRP + M G
Sbjct: 555 TMQETLVSDIVDVASGYSDPLYQLADNISQLDALVGLAVAAVDG--NYVRPKILQMSGGE 612
Query: 522 LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 581
+ L RHPIV + Y+P+D +F E F ++TGPNMGGKST++R++ SV +AQI
Sbjct: 613 IKLENVRHPIVAKKQS-QYVPSDAHFTKDERRFQILTGPNMGGKSTFMRAVATSVVMAQI 671
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
G FVPCD ATISV D I TRVGA D RG+STFM EM ETA ++K TENSL++IDELG
Sbjct: 672 GSFVPCDEATISVRDAILTRVGAGDEIVRGVSTFMAEMLETAFIMKSATENSLIVIDELG 731
Query: 642 RGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNL 701
RGTST+DG G+A +I+ E+++ ++ F +FATH+HE+A L IP NV VSAL ++ +
Sbjct: 732 RGTSTYDGLGLAWAISNEISTEQRSFCIFATHYHELAALEAQIPGVVNVHVSALAEDSRI 791
Query: 702 VLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY 741
VLLY+V PG C +S+GV A++A P+ ++ +AR + Y
Sbjct: 792 VLLYKVVPGPCSQSFGVQAAELAELPKSVVSEARQRLSRY 831
>gi|402080716|gb|EJT75861.1| DNA mismatch repair protein msh-2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 923
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/708 (36%), Positives = 383/708 (54%), Gaps = 60/708 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
VGV D ++ + E D+D +SN EA+++Q KECL+ + + NK+ K+ I
Sbjct: 150 VGVCFADASVRELGVSEFLDNDLFSNFEALLIQLGVKECLIQHDKADVNKDPDLAKLKQI 209
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+D + M+ R ++F +D+ QD+ RL++ + ++A LLP+ L A +LI Y
Sbjct: 210 IDSCGIAMSERSVSDFGTKDIEQDLARLLK----DERSASLLPQTDLKLAMGAASALIKY 265
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRT 264
L ++ + N Q+ + D S+++ + +A + +L+++P G+ SL G+L+ C+T
Sbjct: 266 LNVLQDPSNFGQYQLFQHDLSQFMKLDAAALKALNLMP--GARDGSKTMSLFGLLNHCKT 323
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG 324
P G RLL+QW+KQPL + + I R V +N+TE R + E LR +PD+ LA R
Sbjct: 324 PVGSRLLSQWLKQPLMNKEEIESRQQLVEAFMNDTELRQTMQEEHLRSVPDLYRLAKRFQ 383
Query: 325 RKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-----------EASNLNTILSSLQ--- 370
RKKA L+D R Y+ V +LP I LE ++ V + L+ L LQ
Sbjct: 384 RKKANLEDVVRTYQVVIRLPGFIGTLEGVMDEVYRDPIDATYTTKLRELSDSLVRLQEMV 443
Query: 371 ----------------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIKLE 407
L+++ +K D + M + A L DK I LE
Sbjct: 444 ETTVDLDALDNHEFIIKPEFDDGLRIIRKKLDRLRSDMNKEFTKAADDLGQEMDKKIFLE 503
Query: 408 NSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
N G+ R+T I + Y T + GV F L + ++ + + Y+ Q
Sbjct: 504 NHKVHGWCMRLTRTEAGCIRNTSGYQECSTQKNGVYFTTKHLQSLRREFDQLSKNYDRTQ 563
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
S+V EV+ ++A Y L +L VLA DV+VSF+ S AP YVRP + G G +L
Sbjct: 564 GSLVNEVVSVAASYAPLLERLGGVLAHLDVIVSFAHCSVHAPISYVRPKVHARGEGRTLL 623
Query: 525 NQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RHP +E+Q V +I NDV SF ++TGPNMGGKSTYIR +GV +AQIGCF
Sbjct: 624 KEARHPCLEMQDDVQFITNDVELDRQGSSFLIITGPNMGGKSTYIRQVGVIALMAQIGCF 683
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VPC A I+V D I RVGA+DSQ +G+STFM EM ETA ++K T +SL+IIDELGRGT
Sbjct: 684 VPCAEAEITVYDAILARVGASDSQLKGVSTFMAEMLETANILKSATADSLIIIDELGRGT 743
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV-------SALEQ 697
ST+DGFG+A +I+ + LFATHFHE+ L+ N+ V SA +
Sbjct: 744 STYDGFGLAWAISEHIVREIGSAALFATHFHELTALADQHKQVDNLHVTAHISGTSASAK 803
Query: 698 ED---NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
ED + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 804 EDEKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE 851
>gi|46123905|ref|XP_386506.1| MSH2_NEUCR DNA mismatch repair protein MSH2 [Gibberella zeae PH-1]
Length = 930
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 277/854 (32%), Positives = 423/854 (49%), Gaps = 124/854 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT----- 54
F FF P ++ TIR F+R ++Y HG+DA I + +V+ +G+ D T
Sbjct: 15 FIRFFKSLPDVNQDTIRIFDRGDWYTSHGQDANYIAKTVYKTTSVVRQLGRNDHTGLPSV 74
Query: 55 ----------LETVLV-------------NKSNLSCFSH--------------------- 70
L L+ + N C
Sbjct: 75 TMTMTVFRQFLREALLKLGKRIEIWQSSSGRMNWKCIKQASPGNLQDVEDDLGGQIESAP 134
Query: 71 -ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
IL V K E VGV D ++ + E D+D YSN EA+++Q +ECL+
Sbjct: 135 MILAVKISAKASEA---RNVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVRECLI 191
Query: 130 PAEYLNDNKN---------KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL 180
+ D K+ KI I+D V + R +F D+ QD+ RL++ +
Sbjct: 192 QVDK-GDKKDENEKDPELAKIKKIIDNCGVAIAERPAGDFGIRDIEQDLARLLK----DE 246
Query: 181 KNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV 240
++A LLP+ L A SLI YL ++ + N Q+ ++ D + ++ + +A + +L++
Sbjct: 247 RSASLLPQTDLKLAMGSAASLIKYLGVLQDPSNFGQYQLYQHDLAHFMKLDAAALKALNL 306
Query: 241 LPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTE 300
+P G S+ G+L+ C+TP G RLLAQW+KQPL + I +R V +TE
Sbjct: 307 MP--GPRDGSKTMSIFGVLNHCKTPVGSRLLAQWLKQPLMSKNEIEKRQQLVEAFYVDTE 364
Query: 301 ARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ----- 355
R L E LR +PD+ L+ R R KA L+D R Y+ V +LP I E ++
Sbjct: 365 LRQTLQEEHLRSIPDLYRLSKRFQRGKANLEDVVRAYQVVIRLPGFIGTFEGVMDENYKD 424
Query: 356 ------NVEASNLNTILSSLQ-------------------------SLKMMDRKDAVMDK 384
+ +L+ L LQ SL+++ +K +DK
Sbjct: 425 PLDEAYTTKLRDLSDSLGKLQDMVEQTVDLDALDRHEYIIKADFDKSLRIIRKKLDQLDK 484
Query: 385 -MKEYLESTARRLNLVADKTIKLENSPQ--GFAYRITMKLNNSI--DDRYTILDTVRGGV 439
++ ++A+ L ADK I LE S + G R+T + I + +Y T + GV
Sbjct: 485 DIRAEFTASAKDLGQEADKKIFLETSHKVHGVCMRLTRQEAGCIRNNSKYQECSTQKNGV 544
Query: 440 RFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFS 499
F +L +Y + + Y Q S+V EV+ +++ Y L +L+ +LA DV+VS +
Sbjct: 545 YFTTKKLQAYRREYDQLSQNYNRTQSSLVHEVVQVASSYCPVLERLAGILAHLDVIVSLA 604
Query: 500 IASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTG 559
AS AP+ YVRP + G G +L + RHP +ELQ V +I NDV + SF ++TG
Sbjct: 605 HASVHAPESYVRPKIHARGEGQTILREARHPCMELQDDVQFITNDVELTRDKSSFLIITG 664
Query: 560 PNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEM 619
PNMGGKSTYIR GV +AQ+GCFVPC A +++ D I RVGA+DSQ +G+STFM EM
Sbjct: 665 PNMGGKSTYIRQTGVIALMAQVGCFVPCAEAELTIYDSILARVGASDSQLKGVSTFMAEM 724
Query: 620 KETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIAL 679
ETA ++K T SL++IDELGRGTST+DGFG+A +I+ + +FATHFHE+
Sbjct: 725 LETANILKSATSESLIVIDELGRGTSTYDGFGLAWAISEHIVKEIGCSAMFATHFHELTA 784
Query: 680 LSRVIPTFRNVQVSA-----------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPE 728
L+ P +N+ V+A + + + LLY+V PG C +S+G+H A++ +P+
Sbjct: 785 LADQYPQVQNLHVTAHIGGTDAAASEADAKREVTLLYKVAPGVCDQSFGIHVAELVRFPD 844
Query: 729 DMLEQARDLMKEYE 742
++ A+ E E
Sbjct: 845 KVVRMAKRKADELE 858
>gi|358338323|dbj|GAA56654.1| DNA mismatch repair protein MSH2 [Clonorchis sinensis]
Length = 764
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 255/657 (38%), Positives = 385/657 (58%), Gaps = 79/657 (12%)
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATH------- 196
I R T +K+ F+ +D+ QD+N L+R P TT
Sbjct: 12 IFQRTGFLATEVEKSNFALQDVTQDLNYLLR-----------RPRGIQTTGISQDNKAFE 60
Query: 197 ------CLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQ 250
CL ++I YL+L +++ N FS+ +V + SA +LH+LP G
Sbjct: 61 HKQGLACLGAIIKYLDLKSDDSNAGVFSLEPFSLDNFVRLDSAATRALHLLP--GPDDKN 118
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
Y S+ G+L+ CRT QG RLLAQW++QPL D++ I ER V LV T R +LH+ L
Sbjct: 119 RYQSVYGVLNNCRTQQGQRLLAQWLRQPLTDINKINERLDMVEALVEETGVRQSLHDDFL 178
Query: 311 RGLPDMQSLAMRIGRKKA-GLKDCYRVYEGVSQLPKLISIL------------ESLVQ-- 355
R +PD Q + ++ RK+ GL+D YR+Y+ V++L IS+L + L++
Sbjct: 179 RRMPDFQRIGRKLQRKQGCGLQDVYRIYQAVARLQNAISLLRQCGGQTSLAVQKCLIEPL 238
Query: 356 NVEASNLNTILSSLQS---LKMMDRKD----------------AVMDKMKEYLES----T 392
V A N + +QS L+M+ R++ + +DK++E +E +
Sbjct: 239 QVAAENFSKFQEMVQSTIDLEMIQRRNEYIIRSDFDDELGELKSKLDKLEESIEDEFRRS 298
Query: 393 ARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATA 449
AR+LNL K++KL+++ Q G+ R+T+K ++ D + +LD +GGVRF++ ++
Sbjct: 299 ARKLNLEPGKSVKLDSNEQLGYFMRVTLKEEKTLRDFKSFEVLDAQKGGVRFRNSSMSQL 358
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSI-ASTCAPKP 508
NT + +++EY QQ+IV+EV+ I+AGY + +++L+ A DV+VS ++ A +
Sbjct: 359 NTSHLEMKQEYAAAQQTIVDEVLRITAGYLEPIHELNACTALLDVIVSLAVTACSATGGQ 418
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
YVRP + P +G +V + RHP +ELQ S IPNDV+ + G+ F ++TGPNMGGKSTY
Sbjct: 419 YVRPRLLPRESGRMVFKEMRHPCLELQDTASVIPNDVHLERGKQIFLVITGPNMGGKSTY 478
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IRS+GV +AQIG FVPC A + VD + RVGAAD Q RG+STFM EM ET++V++
Sbjct: 479 IRSVGVITAMAQIGSFVPCSFAELFPVDAVMARVGAADCQIRGVSTFMAEMLETSSVLRA 538
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQP-FTLFATHFHEIALLSRVIPT- 686
T NSLVIIDELGRGTSTFDGFG+A ++A LA + F+LFATHFHE+ L+R +P
Sbjct: 539 ATPNSLVIIDELGRGTSTFDGFGLAWAVASHLAGPQLGCFSLFATHFHELTTLARHMPGR 598
Query: 687 FRNVQVSALEQED---------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
N++V+A + ++V+LY+V+PG C +SYG+ AK+ G P+ +L +A
Sbjct: 599 VANLRVTAHVSPESSADSINGSSVVMLYKVEPGICTRSYGLDVAKLVGLPDKVLTEA 655
>gi|310801343|gb|EFQ36236.1| MutS domain V [Glomerella graminicola M1.001]
Length = 922
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/707 (34%), Positives = 386/707 (54%), Gaps = 58/707 (8%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVT 143
+VGV D ++ + E D+D +SN EA+++Q +ECL+ + + NK+ K+
Sbjct: 150 SVGVCFADASVRELGVSEFLDNDLFSNFEALLIQLGVRECLVQMDKADKNKDPDLAKLKQ 209
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I+ V ++ R +EF +D+ QD+ RL++ + + LLP+ L A +LI
Sbjct: 210 IITNCGVAVSERSTSEFGTKDIEQDLARLLK----DERATTLLPQTDLKLAMGSAAALIK 265
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL ++++ N Q+ ++ D S+++ + +A + +L+++P G+ SL G+L+ C+
Sbjct: 266 YLGVLHDPSNFGQYQLYQHDLSQFMKLDAAALKALNLMP--GARDGAKSMSLYGLLNHCK 323
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLL+QW+KQPL + + I +R V VN+TE R + E LR +PD+ LA R
Sbjct: 324 TPAGSRLLSQWLKQPLMNKEEIEKRQQLVEAFVNDTELRQTMQEEHLRSVPDLYRLAKRF 383
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------------------EASNLNTI 365
R KA L+D R Y+ V +LP + LE ++ + L+ +
Sbjct: 384 QRGKANLEDVVRAYQVVIRLPGFLGTLEGVMDEAYRDPLDVAYTTPLRGLSDSLAKLSEM 443
Query: 366 LSSLQSLKMMDRKDAV---------------MDKMKEYLE----STARRLNLVADKTIKL 406
+ + L +D + + +DK+K ++ AR L K I L
Sbjct: 444 VETTVDLDALDNHEYIIKPEFDDSLRIIRKKLDKLKRDIDQEFSDAARDLRQEVGKKIFL 503
Query: 407 ENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ R+T + +I ++ Y T + GV F + + ++ + + Y
Sbjct: 504 ENHKVHGYCMRLTRQEAGAIRNKSGYQECSTQKNGVYFTTKTMQSLRREFDQLSQNYNRT 563
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q S+V EV+G++A Y+ L +L+ VLA DV++S + S AP YVRP + G G +
Sbjct: 564 QSSLVSEVVGVAASYSPVLERLAGVLAHLDVIISLAHCSVHAPSEYVRPKIHKRGEGQTI 623
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q V +I NDV + SF ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 624 LKEARHPCLEMQDDVQFITNDVALTRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQIGC 683
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 684 FVPCTEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRG 743
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN--- 700
TST+DGFG+A +I+ + F +FATHFHE+ L+ P N+ V+A D
Sbjct: 744 TSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADEHPQVHNLHVTAHIGGDGGGK 803
Query: 701 -----LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ LLY+V G C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 804 NSKREVTLLYKVDDGVCDQSFGIHVAELVRFPDKVVRMAKRKADELE 850
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 HKFYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT 54
H F FF P + T+R F+R ++Y HGEDA I R +V+T+G+ DKT
Sbjct: 13 HGFIRFFKSLPAVHEDTVRIFDRGDWYTSHGEDANFIARTVYKTTSVVRTLGRDDKT 69
>gi|58259371|ref|XP_567098.1| DNA mismatch repair protein MSH2 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134107449|ref|XP_777609.1| hypothetical protein CNBA7300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260303|gb|EAL22962.1| hypothetical protein CNBA7300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223235|gb|AAW41279.1| DNA mismatch repair protein MSH2, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 965
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 256/718 (35%), Positives = 399/718 (55%), Gaps = 57/718 (7%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
NTVGV VD+ K + E DD+ +SN E++++Q KEC+L A+ K+ +++
Sbjct: 178 NTVGVGFVDVQEKVVGVSEFVDDENFSNTESLLIQLGVKECILQADEKRPELAKLRMLVE 237
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T RK +EF +++ QD+NRL+ E LPE L A L +LINYL
Sbjct: 238 WCGVIVTDRKSSEFQTKNVEQDLNRLLH----ESHAGAALPEFDLKIAMSALSALINYLS 293
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
L+++ Q ++ D S+Y+ + ++ + +L+++P S+ G+L+RC+T Q
Sbjct: 294 LLSDLSLHGQLRLYRHDLSQYMKLDASALKALNLMPNPQELGGNKNMSIYGLLNRCKTSQ 353
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL +W+KQPL + I++R V + V ++ R ++ L+ +PD ++ + ++
Sbjct: 354 GTRLLGRWLKQPLVNRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKR 413
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES----------LVQNVEASNLNTILSSLQSLKMMD 376
AGL+D RVY+ V LP L ILE+ L++ + L + L + M
Sbjct: 414 VAGLEDVVRVYQAVQLLPGLQEILENADTPEPGARDLIEEIWLKPLREHIEKLGNYSSMV 473
Query: 377 RKDAVMDKM-------------------------KEYLESTARR----LNLVADKTIKLE 407
+D++ ++ L+ RR L L DK + LE
Sbjct: 474 EDTIDLDELANHNYVILPTIDEDLQRYREELLNVRDQLDDEHRRVGSDLGLDIDKKLHLE 533
Query: 408 NSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
N +++RIT + I ++ Y L T + G F L + +Y +Q YE Q
Sbjct: 534 NHQVYKYSFRITKAEASLIRNKKEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQQ 593
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ +V+EV+ I++ YT L L +++A DV+VS + S+ AP PYV+P + GTG +V+
Sbjct: 594 RHLVKEVVSIASSYTPVLEMLDNLIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVVV 653
Query: 525 NQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
RHP +E+Q + +IPND + G+ F ++TGPNMGGKSTYIR IGV +AQ+GCF
Sbjct: 654 LGARHPCLEVQDDIVFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGCF 713
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP A + + D I RVGA D+Q +G+STFM EM ETAT+++ T++SL+IIDELGRGT
Sbjct: 714 VPATEARLPIFDCILARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGT 773
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL--------- 695
ST+DGFG+A +I+ +A F LFATHFHE+ LS +N+ V AL
Sbjct: 774 STYDGFGLAWAISEYIAETIHCFCLFATHFHELTSLSEKNSHVKNLHVEALVKDKDGEGG 833
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD--TKTPS 751
+E ++ LLYQVK G C +S+G+H A++A +PE +++ A+ +E E D T+ PS
Sbjct: 834 AKERDITLLYQVKEGICDQSFGIHVAELANFPESVVKLAKRKAEELEDFGDDQTRAPS 891
>gi|50310365|ref|XP_455202.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644338|emb|CAG97910.1| KLLA0F02706p [Kluyveromyces lactis]
Length = 956
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 260/728 (35%), Positives = 409/728 (56%), Gaps = 88/728 (12%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN------KI 141
T+GV+ VD + + ++ D++ +SNLE+ ++Q KECL+P L DN + KI
Sbjct: 159 TIGVSFVDNTNYRIGLFDLLDNEVFSNLESCLIQLGIKECLIPD--LRDNPSMANDLKKI 216
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS- 200
++++DR + K ++F+ +D+ D+ +L D+ L ++ + +CL +
Sbjct: 217 LSVIDRCSCVASFVKPSDFNGKDVEADLAKLCG-DELSLSVSKF--------SANCLGAC 267
Query: 201 --LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--QQGST------SAQ 250
L+NYL +MNNE N+ F + S++V + ++ + +L+V P QG+T S Q
Sbjct: 268 SVLLNYLNIMNNEANVGNFEVVDHSLSQFVKLDASAIKALNVFPTGSQGNTALLSVGSPQ 327
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
SL +L+RC+T G RLL +W+KQPL D+D I +RH V ++ E R +L E L
Sbjct: 328 KCSSLFQLLNRCKTNSGVRLLNEWLKQPLTDIDQITKRHDLVEFFMDQLELRSSLQEECL 387
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQ 370
+PD++ L ++ +K L+D ++Y+ +P + +L+ + V++++L ++ +
Sbjct: 388 PSVPDIRRLTKKL-QKNGNLEDVLKIYQFAQMVPVISDLLKQKTEEVDSNDLMILVKEVL 446
Query: 371 SLKMMDRKDAVMDKMKEYLEST-------------------------------------- 392
M++ + ++K+KE +E+T
Sbjct: 447 LDPMLENANP-LEKLKELVETTVDLEAYEETNEFMIKVEFNEQLSIIRTHLDELKDAIRT 505
Query: 393 -----ARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDD 444
A L +K +KLEN G+ R+T ++ +Y L TV+ G+ F
Sbjct: 506 IHLDTADDLGFDPEKKLKLENHHLHGWCMRLTRNDAKALRQHKKYIELSTVKAGIFFSTK 565
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
L + +Q++YE Q S+V+E++ I+ YT L +LS V AQ D+L SF+ S+
Sbjct: 566 ELKNIAEETSELQKKYEQQQASLVKEIVSITLSYTPVLEKLSVVTAQLDILCSFAQVSSY 625
Query: 505 APKPYVRPCMKPMG----TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGP 560
AP PYVRP M P+ T L+ + RHPIVE+Q V++I NDV G+ F ++TGP
Sbjct: 626 APIPYVRPKMYPLNDQNRTTELIAS--RHPIVEMQDDVTFISNDVKLVQGDSEFIVITGP 683
Query: 561 NMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMK 620
NMGGKSTYIR IGV +AQIGCFVPCD A I+ VD I RVGA DSQ +G+STFMMEM
Sbjct: 684 NMGGKSTYIRQIGVICLMAQIGCFVPCDEAKIAAVDAILCRVGAGDSQLKGVSTFMMEML 743
Query: 621 ETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALL 680
ETA+++K T NSLVI+DELGRGTST+DGFG+A SI+ +A++ FTLFATHFHE+ L
Sbjct: 744 ETASILKNATHNSLVIVDELGRGTSTYDGFGLAWSISEHIATNINCFTLFATHFHELTTL 803
Query: 681 SRVIPTFRNVQVSALEQE------DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
+ + N+ V A ++ D++ LLY+V+ GS +S+G+H A++ +P ++ A
Sbjct: 804 ADKLDNVSNMHVVAHIEDNGSHNSDDITLLYKVEAGSSDQSFGIHVAEVVQFPSKIVNMA 863
Query: 735 RDLMKEYE 742
+ E E
Sbjct: 864 KRKAAELE 871
>gi|451850345|gb|EMD63647.1| hypothetical protein COCSADRAFT_118766 [Cochliobolus sativus
ND90Pr]
Length = 931
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/717 (35%), Positives = 383/717 (53%), Gaps = 69/717 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+ + + +K+ TI D
Sbjct: 149 VGVCFADASVRELGVSEFLDNDLYSNFESLLIQLGVKECLVQLDSTKKDVELSKLRTIAD 208
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ R +F +D+ QD+ RL++ D + A LP A LI YL
Sbjct: 209 NCGCAVAERAPADFGTKDIEQDLPRLLKDD----RAAGSLPLTDQKLAMGSAACLIRYLG 264
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+M++ N Q+ ++ D S+Y+ + +A + +L+++P G SL G+L+ C+TP
Sbjct: 265 VMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNLMP--GPRDGAKNMSLYGLLNHCKTPT 322
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL +L I R V VN+TE R + E LR +PD+ LA + RK
Sbjct: 323 GSRLLAQWLKQPLMNLSDIERRQQLVEAFVNDTELRQTMQEEHLRSIPDLYRLAKKFQRK 382
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN-----------TILSSLQ----- 370
A L+D R Y+ V +LP +S LE+++ L+ T + LQ
Sbjct: 383 AANLEDVVRAYQVVIRLPGFLSALEAVIDEQYKEPLDAEYTEKLRQYTTAFAGLQDMVET 442
Query: 371 --SLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L+ +D + + +DK+K +ES R LN +K + LEN
Sbjct: 443 TVDLEALDNHEFIIKPEFDESLKTIRKRLDKLKRDMESEHMRVGDDLNQDTEKKLFLENH 502
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I + Y + T + GV F + L ++ + Y Q
Sbjct: 503 KVNGWCFRLTRNEAGCIRQKKQYQEISTQKNGVYFTTNTLQEKRREFDQLSENYNRTQAG 562
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ +++ Y + +L+ VLA DV+V+F+ S AP Y RP M P GTG VL +
Sbjct: 563 LVNEVVSVASSYVPVIEKLAAVLAHLDVIVAFAHVSVHAPTSYTRPKMHPRGTGDTVLKE 622
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +S+I NDV + F ++TGPNMGGKSTYIR IGV +AQIGCFVP
Sbjct: 623 ARHPCMEMQDDISFITNDVSLVRNKSEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVP 682
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T+ SL+IIDELGRGTST
Sbjct: 683 CSEAELTIFDCILARVGASDSQIKGVSTFMAEMLETANILKSATKESLIIIDELGRGTST 742
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV-------------- 692
+DGFG+A +I+ + F LFATHFHE+ L+ P +N+ V
Sbjct: 743 YDGFGLAWAISEYIIKEIGAFALFATHFHELTALTDTYPQVQNLHVVAHISEGSSAADDD 802
Query: 693 -------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+A +++ + LLY+V+PG +S+G+H A++ +P+ ++ A+ E E
Sbjct: 803 GDVDMENAAAQKKREVTLLYKVEPGFSDQSFGIHVAELVRFPQKVINMAKRKADELE 859
>gi|426194636|gb|EKV44567.1| hypothetical protein AGABI2DRAFT_187339 [Agaricus bisporus var.
bisporus H97]
Length = 966
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/781 (33%), Positives = 428/781 (54%), Gaps = 82/781 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA------EYLNDNKNKIV 142
+GVA D ++ + + D+D +SN E++I+Q S KE +LP + + NK+
Sbjct: 174 IGVAFADTSVRELGVADFIDNDIFSNTESLIIQLSVKEAILPTGTSAGTTERDIDLNKMK 233
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDD--SELKNARLLPEMCLTTATHCLRS 200
+L+R V +T RK +EF +++ D+ RL++ S + + ++ L TA L +
Sbjct: 234 GVLERCGVVITERKPSEFRSKNIADDLPRLLQSQSPVSTADASATISQLSLPTAPAALSA 293
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS-LLGIL 259
L+ YL L+ ++ N+ + + + D S+Y+ + ++ + +L++ G+ ++ LLG+L
Sbjct: 294 LVQYLSLLTDDSNLGSYKLRTHDLSQYMKLDASALRALNLTENSGTVGLGAKNTTLLGLL 353
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
++C+T QG RLL W+KQPL +L I +R V I N + R L + L+ +PD+Q L
Sbjct: 354 NKCKTSQGTRLLGTWIKQPLVNLHGIRKRQNLVEIFTNESTTRQILQDEYLKVMPDLQRL 413
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL---VQNVEASNLNTILSSLQS----- 371
R R A L+D R+Y+ V +LP +I+ LE++ Q+ +A+ LSSL+
Sbjct: 414 GKRFKRGNASLEDVVRIYQVVLKLPGMITSLEAVQMVSQDYQAAIDEAYLSSLKEHDSHL 473
Query: 372 ------------LKMMDRKDAVM-----DKMKEYLESTAR--------------RLNLVA 400
L +D + V+ +++++ E R LN+
Sbjct: 474 KKYSEMVEATLDLDELDNHNYVIKPDYDERLQQLAEKLKRVRDGLDSEHTVVGDDLNIEL 533
Query: 401 DKTIKLENSP-QGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQRE 459
DK + LEN+ G+ +R+T + ++ L T + GV F L +Y+ + +
Sbjct: 534 DKKLHLENNQVYGYCFRLTKTDAKGLSKKFIELGTNKSGVYFTTKTLKNLAEEYKDLTQT 593
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP------- 512
Y Q +V+EV+ I+A Y L L +V+A DV++SF+ S AP PY++P
Sbjct: 594 YARTQNGLVKEVVNIAATYAPVLETLDNVVAHLDVILSFAHVSVSAPIPYIKPTLLDKGI 653
Query: 513 ----CMKPM-----GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
C + + G+G+LVL + RHP +E+Q +++IPND+ F ++TGPNMG
Sbjct: 654 AFLSCGQYLAEYFEGSGNLVLREARHPCLEVQDEINFIPNDIEMVKDRSEFQIITGPNMG 713
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR +GV +AQIGCFVPC+ A + V D + RVGA DSQ +G+STFM EM ETA
Sbjct: 714 GKSTYIRQVGVIALMAQIGCFVPCEEAQLPVFDSVLCRVGAGDSQLKGVSTFMAEMLETA 773
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
T+++ +++SL+IIDELGRGTST+DGFG+A +I+ +A+ F LFATHFHE+ L +
Sbjct: 774 TILRSASKDSLIIIDELGRGTSTYDGFGLAWAISEHIATKIHAFCLFATHFHELTALDQQ 833
Query: 684 IPTFRNVQVSALEQED-------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ +N+ V A ++ ++ LLY+V+PG +S+G+H A++A +PE++++ A+
Sbjct: 834 LSHVKNLHVVAHVTQNGSNIRDRDITLLYKVEPGISDQSFGIHVAELANFPENVVKLAKC 893
Query: 737 LMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKDTNRILHLQ 796
E E K GD + T+ G M + L + S Q D +++ +LQ
Sbjct: 894 KADELEDFTGEKKLDGDISQ-------ATITNGIVIMEEILHEW---SAQMDESQLHNLQ 943
Query: 797 E 797
+
Sbjct: 944 K 944
>gi|320588440|gb|EFX00909.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 862
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/715 (35%), Positives = 385/715 (53%), Gaps = 66/715 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN-------K 140
TVGV D ++ + E D+D YSN EA+++Q +EC++ E L+ + + K
Sbjct: 74 TVGVCFADATVRELGVSEFLDNDLYSNFEALLIQLGVRECIVQTERLDQDGSVKDPELSK 133
Query: 141 IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
+ I+D V + R ++F+ +D+ QD+ RL++ + + L +LP+ L A +
Sbjct: 134 LKQIIDNCGVAVAERALSDFAIKDIEQDLARLLKDERATL----VLPQSDLKLALGSAAA 189
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILD 260
LI YL ++ + N Q+ ++ D S+++ + +A + +L+++P G+ SL G+L+
Sbjct: 190 LIKYLGVLQDPSNFGQYQLYQHDLSQFMKLDAAAVKALNLMP--GARDGSKTMSLFGLLN 247
Query: 261 RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLA 320
C+TP G RLL+QW+KQPL + I +R V VN+TE R + E LR +PD+ LA
Sbjct: 248 HCKTPLGGRLLSQWLKQPLMNKADIEQRQQLVEAFVNDTELRQTMQEDHLRSVPDLYRLA 307
Query: 321 MRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-----------EASNLNTILSSL 369
R R KA L+D R Y+ V +LP + LE ++ + L+ L+ L
Sbjct: 308 KRFQRNKANLEDVVRAYQVVIRLPGFLGTLEGVMDEAYRVPLDAAYTTKLRTLSDSLAKL 367
Query: 370 Q-------------------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKT 403
Q SL+++ RK D + M AR L+ DK
Sbjct: 368 QEMVETTVDLDALDNHEFIIKPEFDDSLRIIRRKLDRLRLDMDREFAEAARDLHQERDKK 427
Query: 404 IKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
I LEN G+ R+T I ++ Y T + GV F L ++ + Y
Sbjct: 428 IFLENHKVHGWCMRLTRTEAGCIRNQSQYQECSTQKNGVYFTTKALQALRREFDQLSSNY 487
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
Q S+V EV+G++A Y+ L +L+ VL DV+VS + S AP YVRP + G G
Sbjct: 488 NRTQSSLVSEVVGVAASYSPVLERLAGVLGHLDVIVSLAHCSVHAPIAYVRPRIHARGEG 547
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
VL + RHP +E+Q V +I NDV +F ++TGPNMGGKSTYIR IGV +AQ
Sbjct: 548 RTVLREARHPCLEMQDDVQFITNDVVLDRESSAFLIITGPNMGGKSTYIRQIGVIALMAQ 607
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDEL
Sbjct: 608 IGCFVPCAEAELTLFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDEL 667
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA------ 694
GRGTST+DGFG+A +I+ + F LFATHFHE+ L+ P N+ V+A
Sbjct: 668 GRGTSTYDGFGLAWAISEHIVREIGCFALFATHFHELTALADRYPQVTNMHVTAHISGTG 727
Query: 695 -------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 728 SSEDTAKKDEKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE 782
>gi|189211064|ref|XP_001941863.1| DNA mismatch repair protein MSH2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977956|gb|EDU44582.1| DNA mismatch repair protein MSH2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 930
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 257/725 (35%), Positives = 387/725 (53%), Gaps = 86/725 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-----NKIVT 143
VGV D ++ + E D+D YSN E++++Q KECL+ L+ NK +K+ T
Sbjct: 149 VGVCFADASVRELGVTEFLDNDLYSNFESLLIQLGVKECLIQ---LDSNKKDVELSKLRT 205
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT---ATHCLRS 200
I D + R + +F +D+ QD+ RL LK+ R + LT A
Sbjct: 206 IADNCGCAVAERAQADFGTKDIDQDLPRL-------LKDERAAGSLHLTDLNLAMGAAAC 258
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILD 260
LI YL +M++ N Q+ ++ D S+Y+ + +A + +L+++P G SL G+L+
Sbjct: 259 LIRYLGVMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNLMP--GPRDGAKNMSLYGLLN 316
Query: 261 RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLA 320
C+TP G RLLAQW+KQPL ++ I R V VN+TE R + E LR +PD+ LA
Sbjct: 317 HCKTPTGSRLLAQWLKQPLMNVKEIERRQQLVEAFVNDTELRQTMQEEHLRSIPDLYRLA 376
Query: 321 MRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN-----------TILSSL 369
+ RK A L+D R Y+ V +LP +S LE+++ L+ T + L
Sbjct: 377 KKFQRKAANLEDVVRAYQVVIRLPGFLSSLEAVMDEQYKEPLDAEYTDKLRQYTTAFAGL 436
Query: 370 Q-------------------------SLKMMDRKDAVMDKMKEYLESTARR----LNLVA 400
Q SLK++ ++ +DK+K +ES R LN
Sbjct: 437 QDMVETTVDLEALDNHEFIIKPEFDESLKIIRKR---LDKLKREMESEHMRVGDDLNQDT 493
Query: 401 DKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+K + LEN G+ +R+T I + Y + T + GV F + L ++ +
Sbjct: 494 EKKLFLENHKVNGWCFRLTRNEAGCIRQKKQYHEISTQKNGVYFTTNTLQEKRREFDQLS 553
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
Y Q +V EV+ +++ Y + +L+ VLA DV+V+F+ S AP Y RP M P
Sbjct: 554 ENYNRTQSGLVNEVVSVASSYVPVVEKLAAVLAHLDVIVAFAHVSVHAPTSYTRPTMHPR 613
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
GTG+ +L + RHP +E+Q +S+I NDV E F ++TGPNMGGKSTYIR IGV
Sbjct: 614 GTGNTILKEARHPCMEMQDDISFITNDVSLVRNESEFLIITGPNMGGKSTYIRQIGVIAL 673
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQIGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T+ SL+II
Sbjct: 674 MAQIGCFVPCSEAELTIFDCILARVGASDSQIKGVSTFMAEMLETANILKSATKESLIII 733
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV----- 692
DELGRGTST+DGFG+A +I+ + F LFATHFHE+ L P +N+ V
Sbjct: 734 DELGRGTSTYDGFGLAWAISEYIVKEIGAFALFATHFHELTALVDTYPQVQNLHVVAHIS 793
Query: 693 ---------------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
A++++ + LLY+V+PG +S+G+H A++ +P+ ++ A+
Sbjct: 794 EGSAPVVNDDGDVDMDAVQKKREVTLLYKVEPGFSDQSFGIHVAELVRFPQKVINMAKRK 853
Query: 738 MKEYE 742
E E
Sbjct: 854 ADELE 858
>gi|342874150|gb|EGU76220.1| hypothetical protein FOXB_13292 [Fusarium oxysporum Fo5176]
Length = 927
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 274/850 (32%), Positives = 421/850 (49%), Gaps = 119/850 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT----- 54
F F+ P ++ TIR F+R ++Y HG+DA I + +V+ +G+ D +
Sbjct: 15 FIRFYKSLPAVNEDTIRIFDRGDWYTSHGQDATYIAKTVYKTTSVVRQLGRNDHSGLPSV 74
Query: 55 ----------LETVLV-------------NKSNLSCFSH--------------------- 70
L L+ + N C
Sbjct: 75 TMTMTVFRQFLREALLKLGKRVEIWQSPSGRMNWKCIKQASPGNLQDVEDDLGGQVESAP 134
Query: 71 -ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
IL V K E VGV D ++ + E D+D YSN EA+++Q +ECL+
Sbjct: 135 MILAVKISTKASEA---RNVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVRECLI 191
Query: 130 PAEYLNDNKN----KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL 185
+ K+ K+ I+D V + R +F D+ QD+ RL++ + ++A L
Sbjct: 192 QIDKSEKEKDPELSKLKKIIDNCGVAIAERPAGDFGTRDIEQDLARLLK----DERSASL 247
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG 245
LP+ L A SLI YL ++ + N Q+ ++ D + ++ + +A + +L+++P G
Sbjct: 248 LPQTDLKLAMGSAASLIKYLGVLQDPSNFGQYQLYQHDLAHFMKLDAAALKALNLMP--G 305
Query: 246 STSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
S+ G+L+ C+TP G RLLAQW+KQPL I +R V +TE R L
Sbjct: 306 PRDGSKTMSIFGVLNHCKTPVGSRLLAQWLKQPLMSKTEIEKRQQLVEAFYVDTELRQTL 365
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ---------- 355
E LR +PD+ L+ R R KA L+D R Y+ V +LP I E ++
Sbjct: 366 QEEHLRSIPDLYRLSKRFQRGKANLEDVVRAYQVVIRLPGFIGTFEGVMDENYKDPLDEA 425
Query: 356 -NVEASNLNTILSSLQ-------------------------SLKMMDRKDAVMDK-MKEY 388
++ +L+ L LQ SL+++ +K +DK ++
Sbjct: 426 YTIKLRDLSDSLGKLQDMVEQTVDLDALDRHEYIIKADFDKSLRIIRKKLDQLDKDIRAE 485
Query: 389 LESTARRLNLVADKTIKLENSPQ--GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDD 444
++A+ L DK I LE S + G R+T + I + +Y T + GV F
Sbjct: 486 FTASAKDLGQDPDKKIFLETSHKVHGVCMRLTRQEAGCIRNNSKYQECSTQKNGVYFTTK 545
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+L +Y + + Y Q S+V EV+ +++ Y L +L+ VLA DV+VS S AS
Sbjct: 546 KLQAYRREYDQLSQNYNRTQSSLVHEVVQVASSYCPVLERLAGVLAHLDVIVSLSHASVH 605
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
AP+ YVRP + G G +L + RHP +ELQ V +I ND+ + SF ++TGPNMGG
Sbjct: 606 APESYVRPKIHARGEGQTILREARHPCMELQDDVQFITNDIELTRDKSSFLIITGPNMGG 665
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR GV +AQ+GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA
Sbjct: 666 KSTYIRQTGVIALMAQVGCFVPCAEAELTIYDSILARVGASDSQLKGVSTFMAEMLETAN 725
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
++K T SL+IIDELGRGTST+DGFG+A +I+ + +FATHFHE+ L+
Sbjct: 726 ILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCSAMFATHFHELTALADQY 785
Query: 685 PTFRNVQVSA------------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
P +N+ V+A + + + LLY+V PG C +S+G+H A++ +P+ ++
Sbjct: 786 PQVQNLHVTAHIGGTSAAATSEADAKREVTLLYKVAPGVCDQSFGIHVAELVRFPDKVVR 845
Query: 733 QARDLMKEYE 742
A+ E E
Sbjct: 846 MAKRKADELE 855
>gi|14348673|gb|AAK61336.1|AF332582_1 mismatch repair protein Msh2p [Kluyveromyces lactis]
Length = 956
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 260/728 (35%), Positives = 409/728 (56%), Gaps = 88/728 (12%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN------KI 141
T+GV+ VD + + ++ D++ +SNLE+ ++Q KECL+P L DN + KI
Sbjct: 159 TIGVSFVDNTNYRIGLFDLLDNEVFSNLESCLIQLGIKECLIPD--LRDNPSMANDLKKI 216
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS- 200
++++DR + K ++F+ +D+ D+ +L D+ L ++ + +CL +
Sbjct: 217 LSVIDRCSCVASFVKPSDFNGKDVEADLAKLCG-DELSLSVSKF--------SANCLGAC 267
Query: 201 --LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--QQGST------SAQ 250
L+NYL +MNNE N+ F + S++V + ++ + +L+V P QG+T S Q
Sbjct: 268 SVLLNYLNIMNNEANVGNFEVVDHSLSQFVKLDASAIKALNVFPTGSQGNTALLSVGSPQ 327
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
SL +L+RC+T G RLL +W+KQPL D+D I +RH V ++ E R +L E L
Sbjct: 328 KCSSLFQLLNRCKTNSGVRLLNEWLKQPLTDIDQITKRHDLVEFFMDQLELRSSLQEECL 387
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQ 370
+PD++ L ++ +K L+D ++Y+ +P + +L+ + V++++L ++ +
Sbjct: 388 PSVPDIRRLTKKL-QKNGNLEDVLKIYQFAQMVPVISDLLKQKSEEVDSNDLMILVKEVL 446
Query: 371 SLKMMDRKDAVMDKMKEYLEST-------------------------------------- 392
M++ + ++K+KE +E+T
Sbjct: 447 LDPMLENANP-LEKLKELVETTVDLEAYEETNEFMIKVEFNEQLSIIRTHLDELKDAIRT 505
Query: 393 -----ARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDD 444
A L +K +KLEN G+ R+T ++ +Y L TV+ G+ F
Sbjct: 506 IHLDTADDLGFDPEKKLKLENHHLHGWCMRLTRNDAKALRQHKKYIELSTVKAGIFFSTK 565
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
L + +Q++YE Q S+V+E++ I+ YT L +LS V AQ D+L SF+ S+
Sbjct: 566 ELKNIAEETSELQKKYEQQQASLVKEIVSITLSYTPVLEKLSVVTAQLDILCSFAQVSSY 625
Query: 505 APKPYVRPCMKPMG----TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGP 560
AP PYVRP M P+ T L+ + RHPIVE+Q V++I NDV G+ F ++TGP
Sbjct: 626 APIPYVRPKMYPLNDQNRTTELIAS--RHPIVEMQDDVTFISNDVKLVQGDSEFIVITGP 683
Query: 561 NMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMK 620
NMGGKSTYIR IGV +AQIGCFVPCD A I+ VD I RVGA DSQ +G+STFMMEM
Sbjct: 684 NMGGKSTYIRQIGVICLMAQIGCFVPCDEAKIAAVDAILCRVGAGDSQLKGVSTFMMEML 743
Query: 621 ETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALL 680
ETA+++K T NSLVI+DELGRGTST+DGFG+A SI+ +A++ FTLFATHFHE+ L
Sbjct: 744 ETASILKNATHNSLVIVDELGRGTSTYDGFGLAWSISEHIATNINCFTLFATHFHELTTL 803
Query: 681 SRVIPTFRNVQVSALEQE------DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
+ + N+ V A ++ D++ LLY+V+ GS +S+G+H A++ +P ++ A
Sbjct: 804 ADKLDNVSNMHVVAHIEDNGSHNSDDITLLYKVEAGSSDQSFGIHVAEVVQFPSKIVNMA 863
Query: 735 RDLMKEYE 742
+ E E
Sbjct: 864 KRKAAELE 871
>gi|408399575|gb|EKJ78674.1| hypothetical protein FPSE_01162 [Fusarium pseudograminearum CS3096]
Length = 930
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 275/853 (32%), Positives = 421/853 (49%), Gaps = 122/853 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT----- 54
F FF P ++ TIR F+R ++Y HG+DA I + +V+ +G+ D T
Sbjct: 15 FIRFFKSLPDVNQDTIRIFDRGDWYTSHGQDANYIAKTVYKTTSVVRQLGRNDHTGLPSV 74
Query: 55 ----------LETVLV-------------NKSNLSCFSH--------------------- 70
L L+ + N C
Sbjct: 75 TMTMTVFRQFLREALLKLGKRIEIWQSSSGRMNWKCIKQASPGNLQDVEDDLGGQIESAP 134
Query: 71 -ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
IL V K E VGV D ++ + E D+D YSN EA+++Q +ECL+
Sbjct: 135 MILAVKISAKASEA---RNVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVRECLI 191
Query: 130 PAEYLNDNKN--------KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELK 181
+ + KI I+D V + R +F D+ QD+ RL++ + +
Sbjct: 192 QVDKGDKKDEKEKDPELAKIKKIIDNCGVAIAERPAGDFGIRDIEQDLARLLK----DER 247
Query: 182 NARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVL 241
+A LLP+ L A SLI YL ++ + N Q+ ++ D + ++ + +A + +L+++
Sbjct: 248 SASLLPQTDLKLAMGSAASLIKYLGVLQDPSNFGQYQLYQHDLAHFMKLDAAALKALNLM 307
Query: 242 PQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEA 301
P G S+ G+L+ C+TP G RLLAQW+KQPL + I +R V +TE
Sbjct: 308 P--GPRDGSKTMSIFGVLNHCKTPVGSRLLAQWLKQPLMSKNEIEKRQQLVEAFYVDTEL 365
Query: 302 RMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ------ 355
R L E LR +PD+ L+ R R KA L+D R Y+ V +LP I E ++
Sbjct: 366 RQTLQEEHLRSIPDLYRLSKRFQRGKANLEDVVRAYQVVIRLPGFIGTFEGIMDENYKDP 425
Query: 356 -----NVEASNLNTILSSLQ-------------------------SLKMMDRKDAVMDK- 384
+ +L+ L LQ SL+++ +K +DK
Sbjct: 426 LDEAYTTKLRDLSDSLGKLQDMVEQTVDLDALDRHEYIIKADFDKSLRIIRKKLDQLDKD 485
Query: 385 MKEYLESTARRLNLVADKTIKLENSPQ--GFAYRITMKLNNSI--DDRYTILDTVRGGVR 440
++ ++A+ L ADK I LE S + G R+T + I + +Y T + GV
Sbjct: 486 IRAEFTASAKDLGQEADKKIFLETSHKVHGVCMRLTRQEAGCIRNNSKYQECSTQKNGVY 545
Query: 441 FQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSI 500
F +L +Y + + Y Q S+V EV+ +++ Y L +L+ +LA DV+VS +
Sbjct: 546 FTTKKLQAYRREYDQLSQNYNRTQSSLVHEVVQVASSYCPVLERLAGILAHLDVIVSLAH 605
Query: 501 ASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGP 560
AS AP+ YVRP + G G +L + RHP +ELQ V +I NDV + SF ++TGP
Sbjct: 606 ASVHAPESYVRPKIHARGEGQTILREARHPCMELQDDVQFITNDVELTRDKSSFLIITGP 665
Query: 561 NMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMK 620
NMGGKSTYIR GV +AQ+GCFVPC A +++ D I RVGA+DSQ +G+STFM EM
Sbjct: 666 NMGGKSTYIRQTGVIALMAQVGCFVPCAEAELTIYDSILARVGASDSQLKGVSTFMAEML 725
Query: 621 ETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALL 680
ETA ++K T SL++IDELGRGTST+DGFG+A +I+ + +FATHFHE+ L
Sbjct: 726 ETANILKSATSESLIVIDELGRGTSTYDGFGLAWAISEHIVKEIGCSAMFATHFHELTAL 785
Query: 681 SRVIPTFRNVQVSA-----------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
+ P +N+ V+A + + + LLY+V PG C +S+G+H A++ +P+
Sbjct: 786 ADQYPQVQNLHVTAHIGGTDAAASEADAKREVTLLYKVAPGVCDQSFGIHVAELVRFPDK 845
Query: 730 MLEQARDLMKEYE 742
++ A+ E E
Sbjct: 846 VVRMAKRKADELE 858
>gi|315054281|ref|XP_003176515.1| DNA mismatch repair protein msh-2 [Arthroderma gypseum CBS 118893]
gi|311338361|gb|EFQ97563.1| DNA mismatch repair protein msh-2 [Arthroderma gypseum CBS 118893]
Length = 943
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/709 (34%), Positives = 387/709 (54%), Gaps = 61/709 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN--KIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+ E + K+ I D
Sbjct: 157 VGVCFADASVRELGVSEFVDNDLYSNFESLLIQLGVKECLITTEGQKKDVELAKLRQIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T R + F +D+ QD++RL++ D++ +LP+ L A +LI+YL
Sbjct: 217 SCGVAITERPVSAFGTKDIEQDLSRLLK-DET---GPAMLPQTELKLAMGSASALISYLN 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D ++Y+ + ++ + +L+++P G SL G+L+ C+TP
Sbjct: 273 AMSDPSNFGQYQLYKHDLAQYMKLDASALRALNLMP--GPRDGMKNMSLYGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 331 GGRLLAQWLKQPLMNHKDIEKRQQLVEAFVTDTELRQTMQEDHLRSIPDLYRLAKRFQRG 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ------------------NVEASNLNTILSS 368
KA L+D R+Y+ V ++P I+ E ++ + + L ++ +
Sbjct: 391 KANLEDVVRIYQVVIRIPGFINSFEGVMDEQYQTPLDAEYTTKLRKLSQDLGKLTEMVET 450
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L +D + + +DK++ ++S RR L +K + LEN
Sbjct: 451 TVDLDALDNHEFIIKPEFDDSLRIIRKKLDKLRHDMDSEHRRVGRDLGQDTEKKLFLENH 510
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I ++ Y T + GV F + ++ + Y Q
Sbjct: 511 RVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQALRREHDQLSMNYNRTQTG 570
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ ++A Y L QL+ +LA DV+VSF+ S AP YVRP + P GTG+ +L +
Sbjct: 571 LVSEVVNVAASYCPLLEQLAGILAHLDVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKE 630
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +++I NDV E SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 631 ARHPCMEMQDDITFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 690
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 691 CSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 750
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---------- 695
+DGFG+A +I+ + + + F+LFATHFHE+ L P N+ V A
Sbjct: 751 YDGFGLAWAISEHIVTEIKCFSLFATHFHELTALEERYPKAVSNLHVVAFIGDGPATDEK 810
Query: 696 --EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ AR +E E
Sbjct: 811 QQKKKQEVTLLYRVEPGVCDQSFGIHVAELVRFPDKVVNMARQKAEELE 859
>gi|170107109|ref|XP_001884765.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640327|gb|EDR04593.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 965
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 265/782 (33%), Positives = 419/782 (53%), Gaps = 90/782 (11%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP---AEYLND---NKNKI 141
++G+A D ++ + + D+D +SNLE++++Q S KE ++P A D + NK+
Sbjct: 152 SIGIAFADTSIRQLGVADFVDNDLFSNLESLVIQLSVKEAVIPTGTASGTTDRDVDLNKL 211
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVR--FDDSELKNARLLPEMCLTTATHCLR 199
++LDR V +T RK +EF+ +++ D+ RL++ S + +P++ L A L
Sbjct: 212 KSVLDRCGVVITERKPSEFTAKNIADDLPRLLKNSLASSSADVSMTIPQLLLPFAPSALS 271
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS-LLGI 258
+L+ YL L+++ N + + I + D S+Y+ + ++ +L + G+ T ++ L G+
Sbjct: 272 ALVTYLSLLSDPSNHDAYKIFTHDLSQYMKLDASATRALSLTEAPGNVGTTTRNTTLFGL 331
Query: 259 LDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQS 318
L++C+T QG RLL W+KQPL +L I +R V V +T +R L + L+ +PD+Q
Sbjct: 332 LNKCKTAQGARLLGVWLKQPLVNLHEIHKRQNLVETFVEDTNSRRTLQDDYLKMMPDIQR 391
Query: 319 LAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-VQNVEASNLNTILSSLQSLKMMDR 377
L+ R R A L+D RVY+ V +LP +I L + +N E S +L LK +
Sbjct: 392 LSKRFQRSAASLEDVVRVYQMVLKLPGMIETLGGIQSENDEYS----VLVDETFLKPLKE 447
Query: 378 KDAVMDKMKEYLEST--------------------------------------ARRLNLV 399
+A + K E +E T + L L
Sbjct: 448 CEANLSKYAEMVEQTLDLDELDNHNYVIKSDFHPTLQELAEKLKDVNNEHRKAGKDLGLD 507
Query: 400 ADKTIKLENSP-QGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
DK ++L+N P G+ R+T ++ D+YT L+T +GGV F+ L + + +
Sbjct: 508 LDKKLQLQNHPVNGYCLRVTKADAKNLTDKYTELNTNKGGVFFRTKALKQLAEDFAELSQ 567
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLV------------------SFSI 500
Y Q +V+EVI I+A YT L + ++A DV++ S +
Sbjct: 568 TYSRTQSGLVKEVINIAATYTPVLETVDVIIANLDVIIRQNKPLETTALFTDDYCYSLAH 627
Query: 501 ASTCAPKPYVRPCMK--PMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVT 558
S AP PYV+P + G+G+L+L Q RHP +E+Q V +I NDV F ++T
Sbjct: 628 VSVNAPTPYVKPRVSNYSQGSGNLILKQARHPCLEVQDEVDFIANDVEMIKDSSEFQIIT 687
Query: 559 GPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMME 618
GPNMGGKSTYIR +GV +AQ+GCFVPC+ A + + D I RVGA DSQ +G+STFM E
Sbjct: 688 GPNMGGKSTYIRQVGVVSLMAQVGCFVPCEEAEVPIFDSILCRVGAGDSQLKGVSTFMAE 747
Query: 619 MKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIA 678
M ETAT+++ SL+IIDELGRGTST+DGFG+A +I+ +AS F LFATHFHE+
Sbjct: 748 MLETATILQASILYSLIIIDELGRGTSTYDGFGLAWAISEHIASQIHAFCLFATHFHELT 807
Query: 679 LLSRVIPTFRNVQVSA-LE--------QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
L + IP +N+ V A +E ++ + LLY+V+PG +S+G+H A++A +PE
Sbjct: 808 ALDQQIPHVKNLHVVAHIEASMSGKSYRDRAITLLYKVEPGISDQSFGIHVAELANFPES 867
Query: 730 MLEQARDLMKEYE-YSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKD 788
+++ A+ E E +S + K + D + K +EG M D L S ++ D
Sbjct: 868 VVKLAKRKADELEDFSGENKEMASDISQ-------KVTEEGVQIMEDLLAAWSSSTRTLD 920
Query: 789 TN 790
+
Sbjct: 921 QD 922
>gi|409047069|gb|EKM56548.1| hypothetical protein PHACADRAFT_207767 [Phanerochaete carnosa
HHB-10118-sp]
Length = 988
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/722 (35%), Positives = 399/722 (55%), Gaps = 65/722 (9%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP------AEYLNDNKN 139
T VGVA D T++ + + D+D +SN E +I+Q + KE +LP A + +
Sbjct: 177 TKQVGVAFADTSTRELGVADFVDNDLFSNTETLIIQLAVKEAILPTGTQSGATERDVDLK 236
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDD-----SELKNARLLPEMCLTTA 194
K+ +L+R V +T RK +EF+ ++ D+ RL+ + + A ++P++ L A
Sbjct: 237 KLRAVLERCNVVITERKPSEFNSRNIQDDLMRLLSPSSIPSSSTGVDAASIVPQLSLPAA 296
Query: 195 THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS 254
L +L YL L+++ N ++I + D ++++ + ++ + +L+++ G+ A +
Sbjct: 297 PASLAALTTYLSLLSDPTNHGAYTIRTHDLTQFMRLDASALRALNLIDAPGNVGANKNAT 356
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
LLG+L++C+T QG RLLA W+KQPL +L I R V++ V + +R L E L+ LP
Sbjct: 357 LLGLLNKCKTAQGSRLLASWLKQPLVNLHEIRNRQNLVDVFVQDPNSRRLLQEEQLKMLP 416
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNL--NTILSSLQSL 372
DM + + + A L+D RVY+ V +L L+ +ES+ E L T L+ L+
Sbjct: 417 DMHRICKKFQKSVATLEDVVRVYQAVLKLEGLVKNIESIDTTDEYKVLIDETYLTKLKEF 476
Query: 373 KMMDRK--DAVMDKM----------------KEYLESTARRLNLVA-------------- 400
++ K D V D + YLE A++L V
Sbjct: 477 EVSLSKYSDMVQDTLDLDELENHNFVVKPEYDPYLEELAQKLKGVRDELDAEHRRIAAEL 536
Query: 401 ----DKTIKLENSPQ-GFAYRITMKLNNSIDDR---YTILDTVRGGVRFQDDRLATANTQ 452
DK + LENS G+ +RI+ + I+ Y L T + G+ F L +
Sbjct: 537 ELDLDKKLHLENSVNWGYCFRISKLDSKKIEKNRRAYHELGTQKSGMFFTTSPLRELAEE 596
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
Y+ +Y+ Q +V E++ I+A YT L Q + V+A DV++SF+ + AP+PY +P
Sbjct: 597 YRETVAKYKAKQSKLVGEIVAIAATYTPILEQWNGVIAHLDVIISFAHVAVNAPEPYTKP 656
Query: 513 CMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSI 572
+ GTG +VL RHP +E+Q VS+IPNDV E F ++TGPNMGGKSTYIR +
Sbjct: 657 EVLERGTGGMVLKDARHPCLEVQDDVSFIPNDVEMIKDESEFQIITGPNMGGKSTYIRQV 716
Query: 573 GVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
GV LAQ G +VPC A + V D + RVGA DSQ RG+STFM EM ETA +++ T++
Sbjct: 717 GVIALLAQTGSWVPCSEARLPVFDSVLCRVGAGDSQLRGVSTFMAEMLETANILRSATQD 776
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV 692
SL+IIDELGRGTST+DGFG+A +I+ +AS F LFATHFHE+ L++ +P +N+ V
Sbjct: 777 SLIIIDELGRGTSTYDGFGLAWAISEHIASTIHAFCLFATHFHELTTLAQQLPHVKNLHV 836
Query: 693 SA------------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
A + Q+ ++ LLY+V PG C +S+G+H A++A +PE ++ A+ E
Sbjct: 837 VAHVSSADGAEDEGVAQKKDMTLLYKVAPGVCDQSFGIHVAELANFPERVVRLAKRKADE 896
Query: 741 YE 742
E
Sbjct: 897 LE 898
>gi|302418756|ref|XP_003007209.1| DNA mismatch repair protein msh-2 [Verticillium albo-atrum
VaMs.102]
gi|261354811|gb|EEY17239.1| DNA mismatch repair protein msh-2 [Verticillium albo-atrum
VaMs.102]
Length = 922
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 276/846 (32%), Positives = 428/846 (50%), Gaps = 112/846 (13%)
Query: 1 HKFYLFF--FPQKSKTTIRFFNRVEFYCVHGED----AELIQRKSNVV------------ 42
H F +F P+ + TIR F+R ++Y HGED A + + ++VV
Sbjct: 13 HGFIRYFKSLPEVHEDTIRIFDRGDWYTAHGEDANFIARTVYKTTSVVRQLGRDDKTGLP 72
Query: 43 -----------YLVKTMGQKDKTLETVLVNKSNLSC---------------------FSH 70
+L + + + K +E ++ F
Sbjct: 73 SVTMTVTVFRQFLREALYKLSKRVEIYQSTSGRMNWKVVKQASPGNLQDVEEELGGQFEA 132
Query: 71 ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
+++ T + +VGV D ++ + E D+D YSN EA+++Q +ECL+
Sbjct: 133 APMILAVKITAKASEARSVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVRECLIQ 192
Query: 131 AEYLNDNK-----NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL 185
A+ +K K+ I+D V ++ R EF +D+ QD+ RL++ + + L
Sbjct: 193 ADKAEKDKRDPELTKLRQIIDNCGVAVSERSAVEFGTKDIEQDLARLLK----DERAVTL 248
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--Q 243
LP+ + + +LI YL ++++ N Q+ ++ D ++++ + +A + +L+++P +
Sbjct: 249 LPQTEMKLSMGSAAALIKYLGVLHDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMPGPR 308
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
G+ S Y G+L+ C+TP G RLL+QW+KQPL I R V V++TE R
Sbjct: 309 DGAKSMSVY----GLLNHCKTPNGSRLLSQWLKQPLMSKQDIERRQQLVEAFVSDTELRQ 364
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------ 357
+ E LR +PD+ LA R RKKA L+D R Y+ + +LP + LE ++
Sbjct: 365 TMQEEHLRSVPDLYRLAKRFQRKKANLEDVVRAYQVIIRLPGFLGTLEGVMDEAYRDPLD 424
Query: 358 EA--SNLNTILSSLQSLKMM----------DRKDAV---------------MDKMKEYLE 390
EA S L T+ SL L+ M DR + V +DK K ++
Sbjct: 425 EAYTSKLRTLSDSLVKLQEMVETTVDLDALDRHEYVIKPEFDDSLRIIRKKLDKAKRDID 484
Query: 391 ----STARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQD 443
A L +K I LEN G+ R+T I ++ Y T + GV F
Sbjct: 485 QEFNKAAHDLGQEKEKKIFLENHKVHGYCMRLTRTEAGCIRNKSGYQECSTQKNGVYFTT 544
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
L ++ + Y Q S+V EV+G++A Y L +L+ VLA DV++SF+ S
Sbjct: 545 RNLQNLRREFDQQSQNYNRTQASLVNEVVGVAASYCPVLEKLAGVLAHLDVIISFAHCSV 604
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP YVRP M G G VL + RHP +E+Q V +I NDV + SF ++TGPNMG
Sbjct: 605 HAPIEYVRPKMHKRGEGQTVLKEARHPCLEMQDDVQFITNDVELTKDKSSFLIITGPNMG 664
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR IGV +AQ+GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA
Sbjct: 665 GKSTYIRQIGVIALMAQVGCFVPCAEAEMTIFDSILARVGASDSQLKGVSTFMAEMLETA 724
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
++K T SL+IIDELGRGTST+DGFG+A +I+ + +FATHFHE+ L+
Sbjct: 725 NILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCSAMFATHFHELTALADQ 784
Query: 684 IPTFRNVQVSA----LEQED---NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+N+ V+A E+ D + LLY+V+ G C +S+G+H A++ +P+ ++ A+
Sbjct: 785 HAQVKNLHVTAHISGSEEGDAKREVTLLYKVEDGICDQSFGIHVAELVRFPDKVVRMAKR 844
Query: 737 LMKEYE 742
E E
Sbjct: 845 KADELE 850
>gi|296815192|ref|XP_002847933.1| DNA mismatch repair protein msh-2 [Arthroderma otae CBS 113480]
gi|238840958|gb|EEQ30620.1| DNA mismatch repair protein msh-2 [Arthroderma otae CBS 113480]
Length = 942
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 253/722 (35%), Positives = 395/722 (54%), Gaps = 66/722 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+PAE + +K+ I D
Sbjct: 157 VGVCFADASVRELGVSEFVDNDLYSNFESLLIQLGVKECLIPAEGQKKDVELSKLRQIAD 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
V +T R ++F +D+ QD++RL++ D++ +LP+ L A +LI YL
Sbjct: 217 SCGVAITQRPVSDFGTKDIEQDLSRLLK-DET---GPAMLPQTDLKLAMGSAAALIGYLN 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
M++ N Q+ ++ D ++Y+ + ++ + +L+++P G SL G+L+ C+TP
Sbjct: 273 AMSDPSNFGQYQLYKHDLAQYMKLDASALRALNLMP--GPRDGVKSMSLYGLLNHCKTPV 330
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL + I +R V V +TE R + E LR +PD+ LA R R
Sbjct: 331 GGRLLAQWLKQPLMNHTDIEKRQQLVEAFVTDTELRQTMQEDHLRAIPDLFRLAKRFQRG 390
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQ------------------NVEASNLNTILSS 368
A L+D RVY+ V ++P I+ E ++ + + L ++ +
Sbjct: 391 LANLEDVVRVYQVVIRIPGFINSFEGVMDEKYQAPLDAEYTTKLRKLSNDLGKLAEMVET 450
Query: 369 LQSLKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L+ +D + + +DK++ ++S RR L +K + LEN
Sbjct: 451 TVDLEALDNHEFIIKPEFDDSLRIIRKKLDKLRNDMDSEHRRVGRDLGQDTEKKLFLENH 510
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I ++ Y T + GV F + + ++ + Y Q
Sbjct: 511 RVHGWCFRLTRNEAGCIRNKREYQECSTQKNGVYFTTSTMQSLRREHDQLSMNYNRTQSG 570
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ ++A Y L QL+ +LA DV+VSF+ S AP YVRP + P GTG+ +L +
Sbjct: 571 LVNEVVNVAASYCPLLEQLAGILAHLDVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKE 630
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +++I NDV + SF ++TGPNMGGKSTYIR IGV +AQ GCFVP
Sbjct: 631 ARHPCMEMQDDITFITNDVSLIRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVP 690
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRGTST
Sbjct: 691 CSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTST 750
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSAL---------- 695
+DGFG+A +I+ + + + F+LFATHFHE+ L P + N+ V A
Sbjct: 751 YDGFGLAWAISEHIITEIKCFSLFATHFHELTALEERYPKSVSNLHVVAFIGDGPASGDK 810
Query: 696 ----EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++ + LLY+V+PG C +S+G+H A++ +P+ ++ AR +E E D T S
Sbjct: 811 KPEKGKKQEVTLLYRVEPGVCDQSFGIHVAELVRFPDKVVNMARQKAEELE---DFTTSS 867
Query: 752 GD 753
D
Sbjct: 868 AD 869
>gi|346976785|gb|EGY20237.1| DNA mismatch repair protein msh-2 [Verticillium dahliae VdLs.17]
Length = 922
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 276/846 (32%), Positives = 428/846 (50%), Gaps = 112/846 (13%)
Query: 1 HKFYLFF--FPQKSKTTIRFFNRVEFYCVHGED----AELIQRKSNVV------------ 42
H F +F P+ + TIR F+R ++Y HGED A + + ++VV
Sbjct: 13 HGFIRYFKSLPEVHEDTIRIFDRGDWYTAHGEDANFIARTVYKTTSVVRQLGRDDKSGLP 72
Query: 43 -----------YLVKTMGQKDKTLETVLVNKSNLSC---------------------FSH 70
+L + + + K +E ++ F
Sbjct: 73 SVTMTVTVFRQFLREALYKLSKRVEIYQSTSGRMNWKVVKQASPGNLQDVEEELGGQFEA 132
Query: 71 ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
+++ T + +VGV D ++ + E D+D YSN EA+++Q +ECL+
Sbjct: 133 APMILAVKITAKASEARSVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVRECLIQ 192
Query: 131 AEYLNDNK-----NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL 185
A+ +K K+ I+D V ++ R EF +D+ QD+ RL++ + + L
Sbjct: 193 ADKAEKDKRDPELTKLRQIIDNCGVAVSERSAVEFGTKDIEQDLARLLK----DERAVTL 248
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--Q 243
LP+ L + +LI YL ++++ N Q+ ++ D ++++ + +A + +L+++P +
Sbjct: 249 LPQTELKLSMGSAAALIKYLGVLHDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMPGPR 308
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
G+ S Y G+L+ C+TP G RLL+QW+KQPL I +R V ++TE R
Sbjct: 309 DGAKSMSVY----GLLNHCKTPNGSRLLSQWLKQPLMSKQDIEKRQQLVEAFASDTELRQ 364
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------ 357
+ E LR +PD+ LA R RKKA L+D R Y+ + +LP + LE ++
Sbjct: 365 TMQEEHLRSVPDLYRLAKRFQRKKANLEDVVRAYQVIIRLPGFLGTLEGVMDEAYRDPLD 424
Query: 358 EA--SNLNTILSSLQSLKMM----------DRKDAV---------------MDKMKEYLE 390
EA S L T+ SL L+ M DR + V +DK K ++
Sbjct: 425 EAYTSKLRTLSDSLVKLQEMVETTVDLDALDRHEYVIKPEFDDSLRIIRKKLDKAKRDID 484
Query: 391 ----STARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQD 443
A L +K I LEN G+ R+T I ++ Y T + GV F
Sbjct: 485 QEFNKAAHDLGQEKEKKIFLENHKVHGYCMRLTRTEAGCIRNKSGYQECSTQKNGVYFTT 544
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
L ++ + Y Q S+V EV+G++A Y L +L+ VLA DV++SF+ S
Sbjct: 545 RNLQNLRREFDQQSQNYNRTQASLVNEVVGVAASYCPVLEKLAAVLAHLDVIISFAHCSV 604
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP YVRP M G G VL + RHP +E+Q V +I NDV + SF ++TGPNMG
Sbjct: 605 HAPIEYVRPKMHKRGEGQTVLKEARHPCLEMQDDVQFITNDVELTKDKSSFLIITGPNMG 664
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR IGV +AQ+GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA
Sbjct: 665 GKSTYIRQIGVIALMAQVGCFVPCAEAEMTIFDSILARVGASDSQLKGVSTFMAEMLETA 724
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
++K T SL+IIDELGRGTST+DGFG+A +I+ + +FATHFHE+ L+
Sbjct: 725 NILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCSAMFATHFHELTALADQ 784
Query: 684 IPTFRNVQVSA----LEQED---NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+N+ V+A E+ D + LLY+V+ G C +S+G+H A++ +P+ ++ A+
Sbjct: 785 HAQVKNLHVTAHISGSEEGDAKREVTLLYKVEDGICDQSFGIHVAELVRFPDKVVRMAKR 844
Query: 737 LMKEYE 742
E E
Sbjct: 845 KADELE 850
>gi|49615724|gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 942
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 277/843 (32%), Positives = 436/843 (51%), Gaps = 111/843 (13%)
Query: 4 YLFFFPQKSKTT--IRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLV 60
+L FF K T +R F+R ++Y HG+DA I + + ++ +G L +V V
Sbjct: 24 FLSFFKTLPKDTRAVRLFDRRDYYTAHGDDASFIAKTYYHTTSALRQLGNGADALSSVTV 83
Query: 61 NKSNLSCFSHILCVISEDKTLE-------------------------TVLTN-------- 87
+++ + + + D+TLE + N
Sbjct: 84 SRNMFETIARDILLERMDRTLELYEGSGSNWRLVKNGTPGVLGSFEDILFANNEMQDSPV 143
Query: 88 -------------TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
T+G+ VD+ + + E DD +++NLE+ +V +ECL+PAE
Sbjct: 144 IVALAPNSSQNGCTIGLGYVDITKRILGLAEFLDDSHFTNLESALVALGCRECLVPAETG 203
Query: 135 NDNKNK-IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
++ + + + R V +T RKK EF DL+QD+ RLV+ +++ E C
Sbjct: 204 KSSEYRPLYDAISRCGVMVTERKKAEFKGRDLVQDLGRLVKGSTEPVRDLVSGFE-CAAG 262
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A C+ ++Y EL+ +E N + + + S Y+ + SA M +L+V+ + T A
Sbjct: 263 ALGCI---LSYAELLADESNYGNYIVKQYNLSSYMRLDSAAMRALNVM--ESKTDANKNF 317
Query: 254 SLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
SL G+++R C G RLL W+KQPL D+D I R V V + R +L ++ L+
Sbjct: 318 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDKINCRLDLVQAFVEDAALRQDLRQH-LKR 376
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL---------------VQNV 357
+ D++ L + RK+A L ++Y+ +LP + S+L ++N+
Sbjct: 377 IADIERLTRNLERKRASLVHVVKLYQSSIRLPYIKSVLARYDGQFATLIREKYIDPLENL 436
Query: 358 EASN-LNTI---------LSSLQSLKMM-----DRKDAVMDKMKEYLE--------STAR 394
N LN L L+S + M D + + +E LE TA
Sbjct: 437 SDDNHLNKFIGLVETSIDLDQLESGEYMISSAYDPNLSALKDEQETLERHIHNLHKQTAN 496
Query: 395 RLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATA 449
L+L DK++KL+ G +RIT K + ++ Y IL+T + GV+F + +L
Sbjct: 497 DLDLPVDKSLKLDKETTFGHVFRITKKEEPKIRKQLNSHYIILETRKDGVKFTNTKLKKL 556
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
QYQ I EY++ Q+ +V V+ +A +++ ++ L++ DVL+S + + P PY
Sbjct: 557 GDQYQKIVEEYKSCQKELVARVVQTAASFSEVFEGIAGSLSELDVLLSLADLAASCPTPY 616
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
RP + P TG ++L CRHP VE Q V++IPND GE F ++TGPNMGGKSTYI
Sbjct: 617 TRPNITPPDTGDIILEGCRHPCVEAQDWVNFIPNDCRLVRGESWFQIITGPNMGGKSTYI 676
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R +GV++ +AQ+G FVPC++A+IS+ D IF RVGA D Q RG+STFM EM ETA+++K
Sbjct: 677 RQVGVNILMAQVGSFVPCNNASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 736
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS-------- 681
T+ SL+IIDELGRGTST+DGFG+A +I + + TLFATHFHE+ L+
Sbjct: 737 TDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALANANGDNGH 796
Query: 682 RVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMK 739
+ I N VSA L +LY+V+PG+C +S+G+H A+ A +P +++ AR+
Sbjct: 797 KQIAGVANFHVSAHIDASSRKLTMLYKVQPGACDQSFGIHVAEFANFPRSVVDLAREKAS 856
Query: 740 EYE 742
E E
Sbjct: 857 ELE 859
>gi|410730699|ref|XP_003980170.1| hypothetical protein NDAI_0G05110 [Naumovozyma dairenensis CBS 421]
gi|401780347|emb|CCK73494.1| hypothetical protein NDAI_0G05110 [Naumovozyma dairenensis CBS 421]
Length = 962
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 260/760 (34%), Positives = 418/760 (55%), Gaps = 87/760 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK----NKIVTI 144
+GVA VD K M I D++ YSNLE+ ++Q +EC++ NDN KI +
Sbjct: 157 IGVAFVDTTAYKIGMLNIVDNEVYSNLESFLIQLGVRECIIQDMSNNDNTASDFKKITGV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
LDR +T K +EFS++D+ D+ +L++ +EL + LPE A +LI Y
Sbjct: 217 LDRCGCVVTTVKSSEFSDKDVEMDLTKLLK---NELSLS--LPEKYSNLAMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ--------------QGSTSAQ 250
LEL+N +D ++++ + +++ + ++ + ++++ PQ S
Sbjct: 272 LELLNEQDQLDRYELIEHSLQEFMKLDASAIKAMNLFPQGPVQPFGPSISSSFSNSNGGG 331
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
SL +L+ C+T G RLL +W+KQPL +LD I +RH V L++ E R L L
Sbjct: 332 KIASLFQLLNNCKTNAGTRLLNEWLKQPLTNLDEITKRHDLVGYLMDQLELRQMLQTETL 391
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQN------------VE 358
+PD++ L ++ +K L+D ++YE ++P++ +LES ++ V
Sbjct: 392 PAVPDLRRLTKKL-KKSGNLEDVLKLYEFSKKIPEITQLLESFLEEGSSQSEEDVSSLVR 450
Query: 359 ASNLNTILSSLQSLKMMDRK----------------------DAVMDKMKEYLESTARRL 396
++ ++ + S L L D + + K++E L+S ++
Sbjct: 451 STWIDPLSSYLDPLSKFDEMVETTVDLQAYEENNEYMIKVEFNEELAKIREQLDSMKEQI 510
Query: 397 NLV-----------ADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
N++ +K +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 NIIHLDSAEDLGFDPEKKLKLENHHLHGWCMRLTRNDAKELRKHKKYLELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
L + +Q+EY+ Q S+V+E++GI++ Y+ L +LS +LA DVL SFS AS
Sbjct: 571 TRELKELAQETAVLQKEYDRQQSSLVKEIVGITSSYSPVLEKLSQILAHLDVLCSFSHAS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP M + + L + RHP++E+Q +++I N+V + G F ++TGPN
Sbjct: 631 SFAPIPYIRPTMHGIDSDRKTHLIKSRHPVLEMQEDLNFIANNVTLERGVGDFIIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR + V +AQIGCFVPC+ A I+VVD I RVGA DSQ +G+STFM+EM E
Sbjct: 691 MGGKSTYIRQVAVISLMAQIGCFVPCEQADIAVVDAILCRVGAGDSQLKGVSTFMVEMLE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K T+NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNATKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTSLS 810
Query: 682 RVIPTFRNVQVSA--------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQ 733
+P +N+ V+A E ED + LLY+V+PG +S+G+H A++ +P+ ++
Sbjct: 811 DKLPNVKNMHVAAHVEMNRSKFENED-ITLLYRVEPGISDQSFGIHVAEVVQFPDKIVRM 869
Query: 734 ARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQM 773
A+ E + D K G+E + + + + EG ++
Sbjct: 870 AKRKANELD---DLK--RGNEDAKKAKLTIQEINEGNKKL 904
>gi|452000375|gb|EMD92836.1| hypothetical protein COCHEDRAFT_1154553 [Cochliobolus
heterostrophus C5]
Length = 931
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/717 (35%), Positives = 381/717 (53%), Gaps = 69/717 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ + E D+D YSN E++++Q KECL+ + + +K+ TI D
Sbjct: 149 VGVCFADASVRELGVSEFLDNDLYSNFESLLIQLGVKECLVQLDSTKKDVELSKLRTIAD 208
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ R +F +D+ QD+ RL++ D + A LP A LI YL
Sbjct: 209 NCGCAVAERASADFGTKDIEQDLPRLLKDD----RTAGSLPLTDQKLAMGSAACLIRYLG 264
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+M++ N Q+ ++ D S+Y+ + +A + +L+++P G SL G+L+ C+TP
Sbjct: 265 VMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNLMP--GPRDGAKNMSLYGLLNHCKTPT 322
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL D+ I R V VN+TE R + E LR +PD+ LA + RK
Sbjct: 323 GSRLLAQWLKQPLMDISEIERRQQLVEAFVNDTELRQTMQEEHLRSIPDLYRLAKKFQRK 382
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN-----------TILSSLQS---- 371
A L+D R Y+ V +LP +S E+++ L+ T + LQ
Sbjct: 383 AANLEDVVRAYQVVIRLPGFLSSFEAVIDEQYKEPLDAEYTEKLRQYTTAFAGLQDMVET 442
Query: 372 ---LKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L+ +D + + +DK+K +ES R LN +K + LEN
Sbjct: 443 TVDLEALDNHEFIIKPEFDESLRTIRKRLDKLKRDMESEHMRVGDDLNQDTEKKLFLENH 502
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +R+T I + Y + T + GV F + L ++ + Y Q
Sbjct: 503 KVNGWCFRLTRNEAGCIRQKKQYQEISTQKNGVYFTTNTLQEKRREFDQLSENYNRTQAG 562
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ +++ Y + +L+ VLA DV+V+F+ S AP Y RP M GTG VL +
Sbjct: 563 LVNEVVSVASSYVPVIEKLAAVLAHLDVIVAFAHVSVHAPTSYTRPKMHARGTGDTVLKE 622
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q +S+I NDV + F ++TGPNMGGKSTYIR IGV +AQIGCFVP
Sbjct: 623 ARHPCMEMQDDISFITNDVSLVRNKSEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVP 682
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T+ SL+IIDELGRGTST
Sbjct: 683 CSEAELTIFDCILARVGASDSQIKGVSTFMAEMLETANILKSATKESLIIIDELGRGTST 742
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV-------------- 692
+DGFG+A +I+ + F LFATHFHE+ L+ P +N+ V
Sbjct: 743 YDGFGLAWAISEYIIKEIGAFALFATHFHELTALTDTYPQVQNLHVVAHISEGSSAPDDD 802
Query: 693 -------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+A +++ + LLY+V+PG +S+G+H A++ +P+ ++ A+ E E
Sbjct: 803 GDVDMENAAAQKKREVTLLYKVEPGFSDQSFGIHVAELVRFPQKVINMAKRKADELE 859
>gi|391871877|gb|EIT81026.1| mismatch repair ATPase MSH2 [Aspergillus oryzae 3.042]
Length = 934
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 259/714 (36%), Positives = 389/714 (54%), Gaps = 74/714 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-----NKIV 142
+VGV D ++ + E D+D YSN E++I+Q KECL+ ++ NK KI
Sbjct: 156 SVGVCFADASVRELGVSEFLDNDIYSNFESLIIQLGVKECLVQ---MDANKKDVELGKIR 212
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
I D + ++ R ++ +D+ QD+ RL+R + ++A LP+ L A +LI
Sbjct: 213 AIADSCGIAISERPVADYGVKDIEQDLTRLLR----DERSAGTLPQTELKLAMGSASALI 268
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
YL +M + N Q+ ++ D S+++ + S+ + +L+++P G SL G+L+ C
Sbjct: 269 KYLGVMTDPTNFGQYQLYQHDLSQFMKLDSSALRALNLMP--GPRDGSKSMSLFGLLNHC 326
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
+TP G RLL PL DL I +R V V NTE R + E LR +PD+ LA R
Sbjct: 327 KTPVGSRLL------PLMDLAEIEKRQQLVEAFVVNTELRQTMQEEHLRSIPDLYRLAKR 380
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILESL--------VQNVEASNLNTILSSLQSLKM 374
RK+A L+D RVY+ +LP ++ LE++ ++ SNL + SL L+
Sbjct: 381 FQRKQANLEDVVRVYQVAIRLPGFVNSLENVMDEEYQTPLETEYTSNLRSHSDSLAKLEE 440
Query: 375 MDRKDAVMDKMK--------EYLES---------------------TARRLNLVADKTIK 405
M +D ++ E+ ES AR L+ +K +
Sbjct: 441 MVETTVDLDALENHEFIIKPEFDESLRIIRKKLDKLRHDMGVEHRRVARDLDQDIEKKLF 500
Query: 406 LENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
LEN G+ +R+T + I ++ Y T + GV F + T ++ + Y
Sbjct: 501 LENHRVHGWCFRLTRNESGCIRNKREYQECSTQKNGVYFTTSTMQTLRREHDQLSSNYNR 560
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q +V EV+ ++A Y L +L+ V+A DV+VSF+ AS AP PY RP M P GTG+
Sbjct: 561 TQTGLVNEVVNVAASYCPVLERLAGVIAHLDVIVSFAHASVHAPTPYARPKMHPRGTGNT 620
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
VL + RHP +E+Q +S+I NDV E SF ++TGPNMGGKSTYIR IGV +AQ G
Sbjct: 621 VLKEARHPCMEMQDDISFITNDVALVRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTG 680
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T SL+IIDELGR
Sbjct: 681 CFVPCTEAELTIFDCILARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGR 740
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSAL------ 695
GTST+DGFG+A +I+ + + + F LFATHFHE+ AL R + +N+ V A
Sbjct: 741 GTSTYDGFGLAWAISEHIVTEIRCFGLFATHFHELTALADRYPKSVKNLHVVAFIGDGTD 800
Query: 696 -------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ + + LLY+V+PG C +S+G+H A++ +PE ++ AR +E E
Sbjct: 801 DDSEDKKSKRNQVTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELE 854
>gi|4139230|gb|AAD04176.1| mismatch repair protein [Arabidopsis thaliana]
Length = 937
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 285/882 (32%), Positives = 460/882 (52%), Gaps = 121/882 (13%)
Query: 15 TIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLVNKSNLSCFSHILC 73
+RFF+R ++Y HGE++ I + + ++ +G L +V ++++ + L
Sbjct: 37 AVRFFDRKDYYTAHGENSVFIAKTYYHTTTALRQLGSGSNALSSVSISRNMFETIARDLL 96
Query: 74 VISEDKTLE-------------------------TVLTN--------------------- 87
+ D T+E + N
Sbjct: 97 LERNDHTVELYEGSGSNWRLVKTGSPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRC 156
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNK-IVTILD 146
+G+A VDL + + E DD ++NLE+ ++ KEC+ PAE N+ K + L+
Sbjct: 157 VIGMAYVDLTRRVLGLAEFLDDSRFTNLESSLIALGAKECIFPAESGKSNECKSLYDSLE 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R V +T RKK+EF DL D+ RLV+ + +++ L+ L AT L +L+++ E
Sbjct: 217 RCAVMITERKKHEFKGRDLDSDLKRLVKGNIEPVRD--LVSGFDL--ATPALGALLSFSE 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR-CRTP 265
L++NEDN F+I D ++ + SA M +L+V+ + T A SL G+++R C
Sbjct: 273 LLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALNVM--ESKTDANKNFSLFGLMNRTCTAG 330
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL W+KQPL DL+ I R V V R +L ++ L+ + D++ L + R
Sbjct: 331 MGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAGLRQDLRQH-LKRISDVERLLRSLER 389
Query: 326 KKAGLKDCYRVYEGVSQLP-----------------------------------KLISIL 350
++ GL+ ++Y+ +LP K I ++
Sbjct: 390 RRGGLQHIIKLYQSAIRLPFIKTAMQQYTGEFASLISERYLKKLEALSDQDHLGKFIDLV 449
Query: 351 ESLV-----QNVE---ASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADK 402
E V +N E +SN +T L+SL+ D+K+ + ++ E + TA L+L DK
Sbjct: 450 ECSVDLDQLENGEYMISSNYDTKLASLK-----DQKELLEQQIHELHKKTAIELDLQVDK 504
Query: 403 TIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+KL+ + Q G +RIT K + + ++ +L+T + GV+F + +L QYQ++
Sbjct: 505 ALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVV 564
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+Y + Q+ +V+ V+ +++ L+ +L++ DVL+SF+ + P PY RP + +
Sbjct: 565 DDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSFADLAASCPTPYCRPEITSL 624
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
G +VL RHP VE Q V++IPND G+ F +VTGPNMGGKST+IR +GV V
Sbjct: 625 DAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVTGPNMGGKSTFIRQVGVIVL 684
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQ+G FVPCD A+IS+ D IF RVGA D Q RG+STFM EM ETA+++K T+ SL+II
Sbjct: 685 MAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIII 744
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV-------IPTFRNV 690
DELGRGTST+DGFG+A +I L ++ TLFATHFHE+ L++ N
Sbjct: 745 DELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELTALAQANSEVSGNTVGVANF 804
Query: 691 QVSA-LEQED-NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-YSLDT 747
VSA ++ E L +LY+V+PG+C +S+G+H A+ A +PE ++ AR+ E E +S +
Sbjct: 805 HVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSS 864
Query: 748 KTPSGDETNNRE--EEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
+ +E+ R+ E+ V G + FL++ ++ K
Sbjct: 865 MIINNEESGKRKSREDDPDEVSRGAERAHKFLKEFAAMPLDK 906
>gi|297834760|ref|XP_002885262.1| hypothetical protein ARALYDRAFT_479358 [Arabidopsis lyrata subsp.
lyrata]
gi|297331102|gb|EFH61521.1| hypothetical protein ARALYDRAFT_479358 [Arabidopsis lyrata subsp.
lyrata]
Length = 937
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 288/892 (32%), Positives = 465/892 (52%), Gaps = 117/892 (13%)
Query: 4 YLFFFPQKSKTT--IRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLV 60
+L F+ T +RFF+R ++Y HGE++ I + + ++ +G L +V +
Sbjct: 24 FLSFYKTLPNATRAVRFFDRKDYYTAHGENSVFIAKTYYHTTTALRQLGSGSNALSSVSI 83
Query: 61 NKS-------------------------------------NLSCFSHILCVISEDKTLET 83
+K+ N+ F +L +E +
Sbjct: 84 SKNMFETIARDLLLERNDHTAELYEGSGSNWRLVKTGSPGNIGSFEDVLFANNEMQDTPV 143
Query: 84 VLT---------NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
V++ +G+A VDL + + E DD ++NLE+ ++ KEC+ PAE
Sbjct: 144 VVSIFPSFQDGRCVIGMAYVDLTRRILGLAEFLDDSRFTNLESSLIALGAKECIFPAESG 203
Query: 135 NDNKNK-IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
N+ K + L+R V +T RKK+EF DL D+ RLV+ + +++ L+ L
Sbjct: 204 KSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLKRLVKGNIEPVRD--LVSGFDL-- 259
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
AT L +L+++ EL++NEDN F+I D ++ + SA M +L+V+ + T A
Sbjct: 260 ATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALNVM--ESKTDANKNF 317
Query: 254 SLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
SL G+++R C G RLL W+KQPL DL+ I R V V R +L ++ L+
Sbjct: 318 SLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAGLRQDLRQH-LKR 376
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP---------------------------- 344
+ D++ L + R++ GL+ ++Y+ +LP
Sbjct: 377 ISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGEFSPLIRERYLKKLEAL 436
Query: 345 -------KLISILESLVQNVEASNLNTILSS-----LQSLKMMDRKDAVMDKMKEYLEST 392
K I ++E V + N ++SS L SLK D+K+ + ++ E + T
Sbjct: 437 SDQDHLGKFIDLVEYSVDLDQLENGEYMISSSYDTTLASLK--DQKELLEQQIHELHKKT 494
Query: 393 ARRLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLA 447
A L+L DK +KL+ + Q G +RIT K + + ++ +L+T + GV+F + +L
Sbjct: 495 AIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 554
Query: 448 TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPK 507
QYQ++ +Y++ Q+ +V+ V+ +++ +L+ +L++ DVL+SF+ + P
Sbjct: 555 KLGDQYQSVVDDYKSCQKELVDRVVQTVTSFSEVFEELAGLLSEMDVLLSFADLAASCPT 614
Query: 508 PYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
PY RP + G +VL RHP VE Q V++IPND G+ F +VTGPNMGGKST
Sbjct: 615 PYCRPEVTSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVTGPNMGGKST 674
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
+IR +GV V +AQ+G FVPCD A+IS+ D IF RVGA D Q RG+STFM EM ETA+++K
Sbjct: 675 FIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILK 734
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV---- 683
T+ SL+IIDELGRGTST+DGFG+A +I L ++ TLFATHFHE+ L++
Sbjct: 735 GATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKKAPTLFATHFHELTALAQSNSEV 794
Query: 684 ---IPTFRNVQVSA-LEQED-NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLM 738
N VSA ++ E L +LY+V+PG+C +S+G+H A+ A +PE ++ AR+
Sbjct: 795 AGDTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKA 854
Query: 739 KEYE-YSLDTKTPSGDETNNRE--EEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
E E +S + + +E+ R+ E+ V G + FL++ ++ K
Sbjct: 855 AELEDFSPSSMIVNNEESGKRKSREDDPDEVSRGAARAHKFLKEFAAMPLDK 906
>gi|366988079|ref|XP_003673806.1| hypothetical protein NCAS_0A08670 [Naumovozyma castellii CBS 4309]
gi|342299669|emb|CCC67425.1| hypothetical protein NCAS_0A08670 [Naumovozyma castellii CBS 4309]
Length = 959
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/734 (35%), Positives = 410/734 (55%), Gaps = 91/734 (12%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN------K 140
+ +GVA +D K M +I D++ YSNLE+ ++Q +EC++ + L +N+N K
Sbjct: 155 SVLGVAFIDTSNYKIGMLDIVDNEVYSNLESFLIQLGVRECIV--QDLTNNENTSREFKK 212
Query: 141 IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
I+ ++DR +T K +EFSE+D+ D+ +L+ ++EL + LP+ A +
Sbjct: 213 IIGVIDRCGSVVTLVKNSEFSEKDVEMDLTKLI---NNELSLS--LPKKYSNLAMGACNA 267
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ-------------GST 247
L+ YLEL+N +D + +F + +++ + ++ + +L++ PQ G+
Sbjct: 268 LLGYLELLNEQDQLGKFELIEHSLQEFMKLDASAIKALNLFPQGPVQPFGPTPTASFGTA 327
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S SL +L+ C+T G RLL +W+KQPL DL I +RH V+ L++ E R L
Sbjct: 328 SGGKIASLFQLLNNCKTNAGIRLLNEWLKQPLTDLARIEQRHDLVDYLIDQLELRQMLQT 387
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
L +PD++ L ++ K L+D ++++ ++P++ +LES + E N N+ +
Sbjct: 388 DTLPMIPDLRRLTKKLN-KNGNLEDVLKIFQFSQKIPEVAQLLESFL---EDDNSNSKVK 443
Query: 368 SLQSLKMMDRKDAVMD-----------------------------------KMKEYLEST 392
SL + +D + +D K++E L+S
Sbjct: 444 SLIKMVWLDPLTSHLDPLSKFQEMVETTVDLEAFETNNQFMIKVEFNEELAKIREQLDSL 503
Query: 393 ARRLNLV-----------ADKTIKLENSP-QGFAYRITMKLNNSIDDR----YTILDTVR 436
++N + DK +KLEN G+ R+T N++ + R Y L TV+
Sbjct: 504 REQINAIHLNAADDLGFDPDKKLKLENHHLHGWCMRLTR--NDAKELRKHRNYLELSTVK 561
Query: 437 GGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLV 496
G+ F L + +Q++Y+ Q ++V+E++GI+ YT L +LS VLA DVL
Sbjct: 562 AGIFFSTKELKEIAQETIKLQKDYDRLQSALVKEIVGITVTYTPVLEKLSQVLAHLDVLC 621
Query: 497 SFSIASTCAPKPYVRPCMKPM-GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFN 555
SF+ S+ AP PYVRP M P T L RHP++E+Q +++I NDV GE F
Sbjct: 622 SFAHVSSYAPIPYVRPKMHPFDSTRRTHLVGSRHPVLEMQDDLTFISNDVDLVDGEGDFL 681
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
++TGPNMGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STF
Sbjct: 682 IITGPNMGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTF 741
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M+EM ETA+++K T+NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFH
Sbjct: 742 MVEMLETASILKNATKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFH 801
Query: 676 EIALLSRVIPTFRNVQVSALEQE-------DNLVLLYQVKPGSCVKSYGVHCAKMAGYPE 728
E+ LS +N+ V A ++ D++ LLY+V+PG +S+G+H A++ +P+
Sbjct: 802 ELTSLSDKFSNVKNMHVVAYIEKGTDQLESDDITLLYKVEPGISDQSFGIHVAEVVQFPD 861
Query: 729 DMLEQARDLMKEYE 742
+++ A+ E E
Sbjct: 862 KIVKMAKRKASELE 875
>gi|350538025|ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
gi|296034481|gb|ADG85112.1| mismatch repair protein [Solanum lycopersicum]
Length = 943
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 275/844 (32%), Positives = 443/844 (52%), Gaps = 113/844 (13%)
Query: 4 YLFFFPQ--KSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLV 60
+L FF K +R F+R ++Y HG+DA I + + ++ +G L +V V
Sbjct: 24 FLSFFKTLPKDVRAVRLFDRRDYYTAHGDDATFIAKTYYHTTTALRQLGNGVGALSSVSV 83
Query: 61 NKSNLSCFSHILCVISEDKTLE-------------------------TVLTN-------- 87
+++ + + + D+TLE + N
Sbjct: 84 SRNMFETIARDILLERMDRTLELYEGSGSNWKLVKSGTPGNFGSFEDILFANNEMQDSPV 143
Query: 88 -------------TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
TVG+ VD+ + + E DD +++NLE+ +V +ECL+P E
Sbjct: 144 IVALAPKFDQNGCTVGLGYVDITKRVLGLAEFLDDSHFTNLESALVALGCRECLVPTETG 203
Query: 135 NDNKNK-IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
++++ + + R V +T RKK EF DL+QD+ RLV+ +++ E C
Sbjct: 204 KSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQDLGRLVKGSVEPVRDLVSSFE-CAAG 262
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A C+ ++Y EL+ ++ N +++ + Y+ + SA M +L+V+ + + A
Sbjct: 263 ALGCI---LSYAELLADDSNYGNYTVKQYNLDSYMRLDSAAMRALNVM--ESKSDANKNF 317
Query: 254 SLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
SL G+++R C G RLL W+KQPL D+D I R V V + R +L ++ L+
Sbjct: 318 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLVQAFVEDAALRQDLRQH-LKR 376
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE----------------SLVQN 356
+ D++ L + RK+A L ++Y+ ++P + S+LE SL +
Sbjct: 377 ISDIERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERYDGQFAPLIRERYIDSLEKW 436
Query: 357 VEASNLNTILSSLQSLKMMDR-----------KDAVMDKMKEYLES-----------TAR 394
+ ++LN ++ +++ +D+ D + +K+ E+ TA
Sbjct: 437 SDDNHLNKFIALVETAVDLDQLENGEYMISSAYDPNLSALKDEQETLEQQIHNLHKQTAN 496
Query: 395 RLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATA 449
L+L DK++KL+ Q G +RIT K + ++ Y +L+T + GV+F + +L
Sbjct: 497 DLDLPIDKSLKLDKGTQFGHVFRITKKEEPKVRRQLNSHYIVLETRKDGVKFTNTKLKKL 556
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFS-IASTCAPKP 508
+YQ I EY++ Q+ +V V+ A +++ L+ L++ DVL+SF+ +AS+C P
Sbjct: 557 GDRYQKILDEYKSCQKELVARVVQTVASFSEVFEGLAGSLSELDVLLSFADLASSC-PTA 615
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
Y RP + P TG ++L CRHP VE Q V++IPND GE F ++TGPNMGGKSTY
Sbjct: 616 YSRPNISPPDTGDIILEGCRHPCVEAQDWVNFIPNDCRLVRGESWFQIITGPNMGGKSTY 675
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR +GV+V +AQ+G FVPCD+ATIS+ D IF RVGA D Q +G+STFM EM ETA+++K
Sbjct: 676 IRQVGVNVLMAQVGSFVPCDNATISIRDCIFARVGAGDCQLKGVSTFMQEMLETASILKG 735
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS------- 681
T SLVIIDELGRGTST+DGFG+A +I + + TLFATHFHE+ L+
Sbjct: 736 ATNRSLVIIDELGRGTSTYDGFGLAWAICEHIVEEIKAPTLFATHFHELTALANENGNNG 795
Query: 682 -RVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLM 738
+ I + N VSA L +LY+V+PG+C +S+G+H A+ A +P+ ++ AR+
Sbjct: 796 HKQISSVANFHVSAHIDSSSRKLTMLYKVQPGACDQSFGIHVAEFANFPQSVVALAREKA 855
Query: 739 KEYE 742
E E
Sbjct: 856 SELE 859
>gi|256271408|gb|EEU06469.1| Msh2p [Saccharomyces cerevisiae JAY291]
Length = 964
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 262/775 (33%), Positives = 426/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECLL N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLLQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIEVRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + DA+ D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR IGV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQIGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNIKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L++ + K++
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920
>gi|151945544|gb|EDN63785.1| MutS-like protein [Saccharomyces cerevisiae YJM789]
Length = 964
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 262/775 (33%), Positives = 426/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECLL N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLLQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + DA+ D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR IGV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQIGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNIKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L++ + K++
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920
>gi|340518853|gb|EGR49093.1| DNA mismatch repair protein [Trichoderma reesei QM6a]
Length = 922
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 272/851 (31%), Positives = 420/851 (49%), Gaps = 120/851 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT-LETV 58
F FF P +R F+R ++Y HG DA I + +V+ +G+ D T L +V
Sbjct: 8 FIRFFKSLPDIGDDAVRIFDRGDWYTAHGSDAMFIAKTVYKTTSVVRQLGKNDHTGLPSV 67
Query: 59 LVN---------------------------KSNLSCFSH--------------------- 70
++ + N C
Sbjct: 68 TISTTVFRQFLREALFKLGKRVEIWQSPSGRMNWKCVKQASPGNLQDVEDELGGQIDSAP 127
Query: 71 -ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
I+ + K E VGV D ++ + E D+D YSNLE++I+Q +ECL+
Sbjct: 128 MIMAIKISAKASEA---RAVGVCFADASVRELGVSEFLDNDLYSNLESLIIQLGVRECLI 184
Query: 130 PAEYLNDNKNK------IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNA 183
E + K K I I++ V + R +F +D+ QD+ RL++ + K+
Sbjct: 185 QYEKGDREKEKDPELAKIRQIINNCGVALAERPAGDFGIKDIEQDLARLLK----DEKSV 240
Query: 184 RLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ 243
+LP+ L A LI Y+ + + N Q+ ++ D + Y+ + +A + +L+++P
Sbjct: 241 AMLPQTDLKLAMGSAACLIKYIGALQDASNFGQYQLYQHDLAHYMKLDAAALKALNLMP- 299
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
G S+ G+L+ C+TP G RLLAQW+KQPL D I +R V +TE R
Sbjct: 300 -GPRDGSKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMSKDEIEKRQQLVEAFFTDTELRQ 358
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL--------VQ 355
+ E LR +PD+ L+ + R KA L+D R Y+ V +LP I LE + +
Sbjct: 359 TMQEEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLPGFIGTLEGVMDEAYKDPLD 418
Query: 356 NVEASNLNTILSSL----------------------------QSLKMMDRKDAVMDK-MK 386
+ + L + SL QSL+++ +K +D+ ++
Sbjct: 419 DAYTNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDQSLRIIRKKLDQLDRDIR 478
Query: 387 EYLESTARRLNLVADKTIKLE--NSPQGFAYRITMKLNNSIDDRYTILD--TVRGGVRFQ 442
+ + AR L+ ADK I LE + G R+T + I + L+ T + GV F
Sbjct: 479 QEFNNAARDLDQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGKSKYLECSTQKNGVYFT 538
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L ++ + + Y Q S+V EV+ +++ Y L +L+ VLA DV+VS S A+
Sbjct: 539 TKQLQAYRREHDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLAGVLAHLDVIVSLSHAA 598
Query: 503 TCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNM 562
AP+ YVRP + P G G L RHP +ELQ V +I NDV + SF ++TGPNM
Sbjct: 599 VHAPEAYVRPKIHPRGEGQTKLTAARHPCMELQDDVQFITNDVELTRDKSSFLIITGPNM 658
Query: 563 GGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKET 622
GGKSTYIR GV +AQ+G FVPC A +++ D I RVGA+DSQ +G+STFM EM ET
Sbjct: 659 GGKSTYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLET 718
Query: 623 ATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR 682
A ++K T SL+IIDELGRGTST+DGFG+A +I+ + F +FATHFHE+ L+
Sbjct: 719 ANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALAD 778
Query: 683 VIPTFRNVQVSA-----------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDML 731
P +N+ V+A + + + LLY+V+PG C +S+G+H A++ +P+ ++
Sbjct: 779 QYPQVKNMHVTAHISGTNSGGDDVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVV 838
Query: 732 EQARDLMKEYE 742
A+ E E
Sbjct: 839 RMAKRKADELE 849
>gi|401623755|gb|EJS41843.1| msh2p [Saccharomyces arboricola H-6]
Length = 964
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 260/775 (33%), Positives = 424/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+G++ +D K M +I D++ YSNLE+ ++Q KECL+ LN N N K++ +
Sbjct: 157 IGISFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTLNPNSNTEVQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ D A LP+ + +LI+Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLGND-----LALSLPQKYSKLSMGACNALISY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TS
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGGNNLAVSGFTSGGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ CRT G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKITSLFQLLNHCRTNAGVRLLNEWLKQPLTNIDQITKRHDLVDYLIDQIELRQMLTTD 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES---------------- 352
L +PD++ L ++ K+ GL+D ++Y+ ++P+++ I S
Sbjct: 392 FLPMIPDIRRLTKKLN-KRGGLEDVLKIYQFSKKIPEIVQIFNSFLEDEGPVESVKELVR 450
Query: 353 ------LVQNVEA-SNLNTILSSLQSLKMMDRKDAVM----------------DKMKEYL 389
L Q+VE S ++ + L + + M D ++E +
Sbjct: 451 STWLAPLSQHVEPLSKFEEMVETTVDLDAYEENNEFMIKIEFNEELAKIRGNLDALREEI 510
Query: 390 ES----TARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+ +A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HTIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQAALVREIISITLTYTPVFEKLSLVLAHLDVISSFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMNSERRTHLVSSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +A F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIAGKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSALEQED---------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A ++D ++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKDTNEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L+Q + K++
Sbjct: 871 MAKRKANELD---DLKT--SNENLKKAKLSLQEVNEGNIRLKALLEQWIRRVKEE 920
>gi|330840928|ref|XP_003292459.1| hypothetical protein DICPUDRAFT_50444 [Dictyostelium purpureum]
gi|325077299|gb|EGC31021.1| hypothetical protein DICPUDRAFT_50444 [Dictyostelium purpureum]
Length = 919
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/708 (36%), Positives = 387/708 (54%), Gaps = 68/708 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A D K + E D+D SNL + I+Q S KECLL ++ N + K+ L
Sbjct: 178 GIAFGDATFKTLGVSEFMDNDNLSNLSSFIMQMSIKECLLYSDPKNYDYAKVKEKLAEAD 237
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ T K +FS ++ QD+ RL+ +KN L ++ A LI +L+L++
Sbjct: 238 IPFTEVPKADFSSKNAEQDLTRLL----GSVKNNLL--DLEKENAIQSASCLIKHLDLLS 291
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV----------LPQQGSTSAQTYDSLLGIL 259
N + +F + D +KY+ + SA LH+ LP +TS + SL +L
Sbjct: 292 NPNYFGKFKLEKFDLNKYMKLDSASFRGLHIIDLKEHNSSGLPNSSATSTKD-QSLYNLL 350
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
++C TP G RLL QW+KQPL D + I R V N+ E R +L L+ + D+ L
Sbjct: 351 NQCNTPMGSRLLLQWVKQPLLDTEEIEMRLNFVETFFNDIELRQSLRSNDLKKIGDLDRL 410
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISI-------------------LESLVQNVEA- 359
+ ++ +KA L+DC +Y V++LP ++S LES++ + +
Sbjct: 411 SKKLHGQKASLEDCVNLYGIVNRLPVVLSTLNGHSGVHQEMLKANFIDSLESIINDFQKF 470
Query: 360 ----------------------SNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLN 397
S+ + L+ +Q L KD K++ + TA +L+
Sbjct: 471 CAMVEKTIDLDLANEKHEYVIRSSFDEALAEIQKL-----KDKTSQKIEGFRIKTADKLD 525
Query: 398 LVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQ 454
L K +KL S + G+ RI+ K + D+ + I T + GVRF + N Y+
Sbjct: 526 LDESK-VKLHYSEKDGYLLRISRKDEVKLRDKKEFIIYATQKDGVRFSIKEINNLNETYK 584
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
+ EY Q + + + I+A + + LS ++A DV V+ + S+ AP P+VRP +
Sbjct: 585 KLSAEYANKQDGLAKRTLQIAASFVPLIEDLSSLIATLDVFVTMAHISSIAPTPFVRPEI 644
Query: 515 KPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
P+GTG+ V+ RHP VE Q GVS+I ND+ E F ++TGPNMGGKST+IR +G+
Sbjct: 645 HPLGTGNTVIFGGRHPCVETQDGVSFIANDIELIREESQFQIITGPNMGGKSTFIRQVGL 704
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
V +AQIGCFVP A +SVVD I +RVGA DSQ RG+STFM EM ET+ ++K T+NSL
Sbjct: 705 IVLMAQIGCFVPAQKAIVSVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVATKNSL 764
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
+IIDELGRGTST+DGFG+A IA + + F LFATHFHE+ +L+ +IP +N+ VSA
Sbjct: 765 IIIDELGRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILADIIPVVKNLHVSA 824
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ + LLY+V+ G+C +S+G+H A +A +P+ ++E A+ KE E
Sbjct: 825 STENNTFTLLYKVESGACDQSFGIHVAVLADFPQQVIETAKLKAKELE 872
>gi|358385712|gb|EHK23308.1| hypothetical protein TRIVIDRAFT_36626 [Trichoderma virens Gv29-8]
Length = 925
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 273/848 (32%), Positives = 417/848 (49%), Gaps = 117/848 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT-LETV 58
F FF P + +R F+R ++Y HG DA I + +V+ +G+ D T L +V
Sbjct: 15 FIRFFKSLPNLGEDAVRIFDRGDWYTSHGNDAMFIAKTVYKTTSVVRQLGKNDHTGLPSV 74
Query: 59 LV---------------------------NKSNLSCFSH--------------------- 70
+ + N C
Sbjct: 75 TLTTTVFRQFLREALFKLGKRVEIWQSSSGRMNWKCIKQASPGNLQDVEDELGGQIDSAP 134
Query: 71 -ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
I+ V K E VGV D ++ + E D+D YSN EA+++Q +ECL+
Sbjct: 135 MIMAVKISAKASEA---RAVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVRECLI 191
Query: 130 PAEYLNDNKNK------IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNA 183
E + K K I I++ V + R +F +D+ QD+ RL++ + K+
Sbjct: 192 QYEKGDREKEKDPELAKIRQIINNCGVALAERPAGDFGIKDIEQDLTRLLK----DEKSV 247
Query: 184 RLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ 243
+LP+ L A LI Y+ + + N Q+ ++ D ++Y+ + +A + +L+++P
Sbjct: 248 AMLPQTDLKLAMGSAACLIKYIGALQDVSNFGQYQLYQHDLAQYMKLDAAALKALNLMP- 306
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
G S+ G+L+ C+TP G RLLAQW+KQPL D I R V +TE R
Sbjct: 307 -GPRDGSKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMSKDEIERRQQLVEAFYTDTELRQ 365
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL--------VQ 355
+ E LR +PD+ L+ + R KA L+D R Y+ V +LP I LE + +
Sbjct: 366 TMQEEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLPGFIGTLEGVMDEAYKDPLD 425
Query: 356 NVEASNLNTILSSL----------------------------QSLKMMDRKDAVMDK-MK 386
+ + L + SL QSL+++ +K +D+ ++
Sbjct: 426 DAYTNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDQSLRVIRKKLDQLDRDIR 485
Query: 387 EYLESTARRLNLVADKTIKLE--NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+ S AR L+ ADK I LE + G R+T + I +Y T + GV F
Sbjct: 486 QEFHSAARDLDQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGKSKYQECSTQKNGVYFT 545
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L ++ + + Y Q S+V EV+ +++ Y L +L+ VLA DV+VS S A+
Sbjct: 546 TKQLQAYRREHDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLAGVLAHLDVIVSLSHAA 605
Query: 503 TCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNM 562
AP+ YVRP M G G L RHP +ELQ V +I NDV + SF ++TGPNM
Sbjct: 606 VYAPEAYVRPKMHTRGEGQTKLTGARHPCMELQDDVQFITNDVDLTRDKSSFLIITGPNM 665
Query: 563 GGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKET 622
GGKSTYIR GV +AQ+G FVPC A +++ D I RVGA+DSQ +G+STFM EM ET
Sbjct: 666 GGKSTYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLET 725
Query: 623 ATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR 682
A ++K T SL+IIDELGRGTST+DGFG+A +I+ + F +FATHFHE+ L+
Sbjct: 726 ANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALAD 785
Query: 683 VIPTFRNVQVSA--------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
P +N+ V+A + + + LLY+V+PG C +S+G+H A++ +P+ ++ A
Sbjct: 786 QYPQVKNMHVTAHISGTNGDVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMA 845
Query: 735 RDLMKEYE 742
+ E E
Sbjct: 846 KRKADELE 853
>gi|403160122|ref|XP_003320671.2| DNA mismatch repair protein MSH2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169419|gb|EFP76252.2| DNA mismatch repair protein MSH2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 980
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/713 (34%), Positives = 394/713 (55%), Gaps = 70/713 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPD-DDYYSNLEAIIVQKSPKECLLPAEYLNDNKN-------- 139
+GVA D + + E P+ +D + N E++I+Q KE ++ N +
Sbjct: 171 MGVAFADTSVRTLGLSEFPEQEDGWGNTESLIIQLGIKEAIIATPTSTKNTSDSSQNTEY 230
Query: 140 -KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCL 198
+++ +L+R V +T RK+ EF+ +++ QD+NRL+ D + LP+ + TA L
Sbjct: 231 QQLIEVLERCGVVVTERKRAEFTLKNVEQDINRLLSGD----RQLAALPQFEMKTALAAL 286
Query: 199 RSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD-SLLG 257
L+NYL ++++ N + + + D +++ + ++ + +LH+ P S + SL G
Sbjct: 287 NPLLNYLAILDDPSNHSAYKFITHDLGQFMRLDASAVRALHLFPNPTSIGGGGKNMSLFG 346
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+L+RC+T QG RLL +W+KQPL +L I +R V I+ + R L + L+ +PD+
Sbjct: 347 LLNRCKTGQGTRLLGRWLKQPLVNLHEIEQRQTLVGIMFQDGLLRQTLQDDHLKAMPDLT 406
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------------------------- 351
++ R + L+D RVY+ V +LP+++ L+
Sbjct: 407 RISKRFIQGAGSLEDVVRVYQAVVKLPEILEALDKADGFETGNSEEAKELLNVIYRLPFQ 466
Query: 352 ----SLVQNVEASNLNTILSSLQSLKMMDRKD---------AVMDKMKEYLES----TAR 394
+L Q VE L L++ + + + D +D+ +E L+ A+
Sbjct: 467 ECVTNLAQYVEMVETTVDLDELENHQFIIKPDFDDDLRELKNALDQNREQLDEEHLRVAQ 526
Query: 395 RLNLVAD-KTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATAN 450
L + D K + EN G+ +R+T K I + Y L G F L N
Sbjct: 527 DLGMGTDSKVLHFENHQVYGYVFRLTRKEAGVIRSKKTYIELSNRNNGCHFTTKTLKELN 586
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
+ + + ++Y+ Q S+V+EV+ I+A Y L +L++++A D++VSF+ S AP Y
Sbjct: 587 NELKDLTQKYQRKQSSLVKEVVSIAASYCPILEKLNEIIAHLDLIVSFAHVSLNAPMTYT 646
Query: 511 RPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
P M +G G + L CRHP +E+Q +++IPND + SF+++TGPNMGGKSTYIR
Sbjct: 647 CPKMYALGEGDVCLKGCRHPCLEVQDDINFIPNDTLMERERSSFHIITGPNMGGKSTYIR 706
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
IGV+ +AQ+GC+VPC A++ V D I RVGA DSQ +GISTFM EM ETA ++K T
Sbjct: 707 QIGVAALMAQLGCYVPCAEASLPVFDSILARVGAGDSQTKGISTFMAEMLETAVILKSAT 766
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNV 690
NSL+IIDELGRGTST+DGFG+A +I+ +A + FTLFATHFHE+ L + + +N
Sbjct: 767 PNSLIIIDELGRGTSTYDGFGLAWAISEHIAVEIKAFTLFATHFHELTTLDKQVEHVKNY 826
Query: 691 QVSA-LEQE-------DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
V A +E++ ++ LLY+V+PG +S+G+H A+MA +PED+L+ AR
Sbjct: 827 HVVAHVEKKSAAGVSSSDITLLYKVEPGFSDQSFGIHVAEMANFPEDVLKLAR 879
>gi|296417699|ref|XP_002838490.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634429|emb|CAZ82681.1| unnamed protein product [Tuber melanosporum]
Length = 905
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 265/830 (31%), Positives = 428/830 (51%), Gaps = 104/830 (12%)
Query: 3 FYLFFFPQKSKTTIRFFNRVEFYCVHGEDAELI-QRKSNVVYLVKTMGQKDKTLETVLVN 61
F FF IR F+R ++Y HG+DA + Q +++ +G LE+ ++
Sbjct: 15 FISFFNSLPETDAIRLFDRNDYYTAHGQDAIYVAQTIYKTTSVIRQLGSSRNPLESCTLS 74
Query: 62 KSNLSCFSHIL--CVISEDKTLETV---LTN----------------------------- 87
++ + + L C+ K +E L N
Sbjct: 75 ---VTAYRNFLRECLFQNRKRVEIWGAKLRNKWGITKKASPGNLQDVEDDFAGQIDSSPI 131
Query: 88 -------------TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
VGV D ++ + E D+D YSN E++I+Q KEC++ ++
Sbjct: 132 ILAVRISVKGEERNVGVCFADASVRELGVSEFADNDLYSNFESLIIQLGVKECVVQSDEQ 191
Query: 135 NDNK--NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
N + K+ I++R + MT RK +EFS +D+ QD++RL+ SE+ A +LP++
Sbjct: 192 NKDYELGKLRGIIERCGIVMTFRKASEFSVKDIEQDLSRLLT---SEIA-AGVLPQVENK 247
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A +LI YL+LM+++ N Q+ ++ D ++Y+ + ++ + +L+++P G
Sbjct: 248 LAMAAASALIRYLQLMSDDLNFGQYRLYQHDLAQYMKLDASAVKALNLMP--GPRDGSKN 305
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
SL G+L++C+T G RLL QW+KQPL L+ I +R V V +TE R + E L+
Sbjct: 306 MSLYGLLNKCKTAIGTRLLGQWLKQPLMSLEEIKKRQFLVEAFVEDTELRQTMQEEHLKS 365
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVE--------ASNLNT 364
+PD+ L+ R + A L+D R Y+ ++P IS E ++ + L
Sbjct: 366 IPDLYRLSKRFQKNLANLEDVVRAYQVAIRIPGFISTFEGVMDETYKDPLDLRYTTKLRE 425
Query: 365 ILSSLQSLK----------MMDRKDAV---------------MDKMKEYLESTARR---- 395
I +L+ L+ +D + + +DK+K +++ R
Sbjct: 426 IYGNLEKLQELVETTVDLDALDNHEFIIKPEFSDDLKLVRDKLDKLKRAMDTEHHRVGSD 485
Query: 396 LNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQ 452
L DK + +EN G+ +R+T SI ++ Y + T++ GV F +
Sbjct: 486 LGQEVDKKLFMENHKTYGWCFRLTRAEAGSIRNQKEYREISTMKNGVFFTTTVMQDLKRD 545
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
+ Y Q +V+EV+ +++ Y L +L+ VLA DV+VSF+ S AP PYV+P
Sbjct: 546 FDKSTYIYNKTQSGLVDEVVTVASSYCPVLEELAAVLAHLDVIVSFAHVSVHAPSPYVKP 605
Query: 513 CMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSI 572
M G G+ +L + RHP +E+Q + +I NDV G F ++TGPNMGGKSTYIR I
Sbjct: 606 KMHARGEGNTILKEARHPCMEMQDDIQFITNDVSLCRGSSEFLIITGPNMGGKSTYIRQI 665
Query: 573 GVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
GV +AQ+GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ET+T++K T
Sbjct: 666 GVIALMAQVGCFVPCSEAELTIFDCILARVGASDSQMKGVSTFMAEMLETSTILKSATSE 725
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV 692
SL+IIDELGRGTST+DGFG+A +I+ + + F +FATHFHE+ L P+ +N+ V
Sbjct: 726 SLIIIDELGRGTSTYDGFGLAWAISEHIVKEIRCFAMFATHFHELTALVDEYPSVKNLHV 785
Query: 693 SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
A ++ LLY+V G +S+G+H A++ +P+ ++ A+ E E
Sbjct: 786 IA-----HVTLLYKVDEGVSDQSFGIHVAELVRFPQKVINMAKRKADELE 830
>gi|440638319|gb|ELR08238.1| hypothetical protein GMDG_03040 [Geomyces destructans 20631-21]
Length = 1765
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/709 (35%), Positives = 382/709 (53%), Gaps = 58/709 (8%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVT 143
T VGV D ++ + E D+D YSNLE++++Q KECL+ + N + +K+
Sbjct: 991 TRNVGVCFADASVRELGVSEFLDNDLYSNLESLLIQLGVKECLIQVDKSNKDIEISKLKA 1050
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I+D + ++ R +F +D+ QD+ R++R D A LP+ L A +LI
Sbjct: 1051 IIDSCGIAVSERPITDFGTKDIEQDLARILR--DEAASGA--LPQTDLKLAMGSAAALIK 1106
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL ++++ N Q+ ++ D ++++ + S + +L+++P G SL G+L+ C+
Sbjct: 1107 YLGILHDPSNFGQYQLYQHDLAQFMKLDSPALKALNLMP--GPRDGSKTMSLFGLLNHCK 1164
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
T G RLLAQW+KQPL D I +R V V +TE R + E LR +PD+ LA R
Sbjct: 1165 TAVGTRLLAQWLKQPLMSKDEIEKRQMLVESFVEDTELRQTMQEEHLRSIPDLYRLAKRF 1224
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQN-----------VEASNLNTILSSLQ-- 370
+K A L+D R Y+ V +LP I LE ++ + V+ + LS LQ
Sbjct: 1225 QKKMANLEDVVRAYQVVIRLPGFIGTLEGVMDDKYKDILDDAYTVKIREYSESLSRLQEM 1284
Query: 371 -----SLKMMDRKDAV---------------MDKMKEYLE----STARRLNLVADKTIKL 406
L MDR + + +DK+K +E S + L+ DK + L
Sbjct: 1285 VETTVDLDAMDRHEFIIKPEFDDSLRIIRKNLDKLKYDMEKESQSVSDDLDQELDKKLFL 1344
Query: 407 EN-SPQGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ R+T I + RY T + GV F + L + ++ + Y
Sbjct: 1345 ENHRTHGWCLRLTRTEAACIRNKKRYLECSTQKNGVYFTTNALQSMRREHDQLSENYNRT 1404
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q S+V EV+ ++ Y + L+ VLA DV+VSF+ S AP Y +P M GTG +
Sbjct: 1405 QSSLVNEVVSVATSYCPVIELLAGVLAHLDVIVSFAHVSVHAPTAYTKPKMHERGTGDTI 1464
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q + +I NDV + F ++TGPNMGGKSTYIR +GV +AQIGC
Sbjct: 1465 LKEARHPCMEMQDDIQFITNDVSLIRKKSEFLIITGPNMGGKSTYIRQVGVIALMAQIGC 1524
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC +A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 1525 FVPCTTAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRG 1584
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL----EQED 699
TST+DGFG+A +I+ + F++FATHFHE+ L+ P N+ V A Q D
Sbjct: 1585 TSTYDGFGLAWAISEHIVKEIAAFSMFATHFHELTALADEFPQVSNLHVVAHIGDGPQSD 1644
Query: 700 N------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ LLY+V+ G C +S+G+H AK+ +PE ++ A+ E E
Sbjct: 1645 GKGDKREVTLLYKVEDGVCDQSFGIHVAKLVRFPEKVVNMAKRKADELE 1693
>gi|302915423|ref|XP_003051522.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732461|gb|EEU45809.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 926
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 272/850 (32%), Positives = 419/850 (49%), Gaps = 120/850 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT----- 54
F FF P ++ TIR F+R ++Y HGEDA I + +V+ +G+ D T
Sbjct: 15 FIRFFKSLPSENDDTIRIFDRGDWYTSHGEDAMFIAKTVYKTTSVVRQLGRNDHTGLPSV 74
Query: 55 ----------LETVLV-------------NKSNLSCFSH--------------------- 70
L L+ + N C
Sbjct: 75 TMTMTVFRQFLREALLKLGKRIEIWQSASGRMNWKCVKQASPGNLQDVEDDLGGQIESAP 134
Query: 71 -ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
IL V K E +GV D ++ + E D+D YSN EA+++Q +ECL+
Sbjct: 135 MILAVKISAKASEA---RNIGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVRECLV 191
Query: 130 PAEYLNDNKN----KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL 185
+ K+ K+ I+D V + R +F D+ QD+ RL++ + ++A L
Sbjct: 192 QIDKSEKEKDPELAKLKKIIDNCGVAIAERPSGDFGTRDIEQDLARLLK----DERSATL 247
Query: 186 LPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG 245
LP+ L A SLI YL ++ + N Q+ ++ D ++++ + +A + +L+++P G
Sbjct: 248 LPQTDLKLAMGSAASLIKYLGVLQDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMP--G 305
Query: 246 STSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
S+ G+L+ C+TP G RLLAQW+KQPL I +R V +TE R L
Sbjct: 306 PRDGSKTMSVYGVLNHCKTPVGSRLLAQWLKQPLMSKQEIEKRQQLVEAFYVDTELRQTL 365
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ---------- 355
E LR +PD+ L+ R R KA L+D R Y+ V +LP I E ++
Sbjct: 366 QEEHLRSIPDLYRLSKRFQRGKANLEDVVRAYQVVIRLPGFIGTFEGVMDENYKDPLDEA 425
Query: 356 -NVEASNLNTILSSLQS-------LKMMDRKDAVM--------------------DKMKE 387
+ +L+ L LQ L +DR + ++ D E
Sbjct: 426 YTTKLRDLSDSLGKLQDMVEQTVDLDALDRHEYIIKADFDKGLRIIRKKLDQLDSDIRAE 485
Query: 388 YLESTARRLNLVADKTIKLENSPQ--GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQD 443
+L ++AR L DK I LE + + G R+T + I ++ Y T + GV F
Sbjct: 486 FL-TSARDLGQEPDKKIFLETNHKVHGVCMRLTRQEAGCIRNKSGYQECSTQKNGVYFTT 544
Query: 444 DRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
++ ++ + + Y Q S+V EV+ +++ Y L +L+ VLA DV+VS A+
Sbjct: 545 KKMQAYRREHDQLSQNYNRTQSSLVHEVVQVASSYCPVLERLAGVLAHLDVIVSLGHAAV 604
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
A + YVRP + G G +L + RHP +ELQ V +I ND+ + SF ++TGPNMG
Sbjct: 605 HALESYVRPKIHARGEGQTILKEARHPCMELQDDVQFITNDIELTRDKSSFLIITGPNMG 664
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR GV +AQ+GCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA
Sbjct: 665 GKSTYIRQTGVIALMAQVGCFVPCSEAELTIYDSILARVGASDSQLKGVSTFMAEMLETA 724
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
++K T +SL+IIDELGRGTST+DGFG+A +I+ + +FATHFHE+ L+
Sbjct: 725 NILKSATADSLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCSAMFATHFHELTALADQ 784
Query: 684 IPTFRNVQVSA-----------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
P +N+ V+A + + + LLY+V PG C +S+G+H A++ +P+ ++
Sbjct: 785 YPQVQNLHVTAHIGGTGGAVSEADAKREVTLLYKVAPGVCDQSFGIHVAELVRFPDKVVR 844
Query: 733 QARDLMKEYE 742
A+ E E
Sbjct: 845 MAKRKADELE 854
>gi|358059739|dbj|GAA94508.1| hypothetical protein E5Q_01160 [Mixia osmundae IAM 14324]
Length = 1575
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/704 (36%), Positives = 392/704 (55%), Gaps = 63/704 (8%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA-----EYLNDNKNKIV 142
T+G+A D ++ + E D+D +SN E+++VQ KE L+ + EY K+
Sbjct: 778 TIGMAYADTSLRRIGLTEFVDNDLFSNTESLLVQLGVKEVLMASFEKSKEY---EAEKLR 834
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
++DR V +T RK ++F+ ++ QD+NRL+R + LPE L + + +LI
Sbjct: 835 QLIDRCSVVITDRKPSDFNIRNIEQDLNRLLRGSPA----IATLPESDLRSGMSAVNALI 890
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-QGSTSAQTYDSLLGILDR 261
YL L+ +E N Q+ + S D S+Y+ + ++ + +L+++P G S+ G+L+R
Sbjct: 891 VYLGLLTDESNFGQYDLKSHDLSQYMRLDASAVRALNLVPDPSGYGGGNKNMSIFGLLNR 950
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
C+T QG RLLAQW+KQPL +L I +R V I+V + R +L E LR +PD+Q LA
Sbjct: 951 CKTAQGMRLLAQWLKQPLVNLHQIEKRQDLVEIMVEDNFLRESLQEDILRAMPDLQKLAK 1010
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEA-------------SNLNTILSS 368
++ R A L+D R+Y+ +LP LI+ LE++ + A + NT L
Sbjct: 1011 KLRRGVATLEDVVRIYQVSIKLPDLINHLETVGEGAPAKLALIKESYLSALTENNTALEK 1070
Query: 369 L-------------------------QSLKMMDRK-DAVMDKMKEYLESTARRLNLVAD- 401
LK + +K +A+ + + A L + D
Sbjct: 1071 YVEMVETTLDLDELANHRYIIKPDFDDELKRIQKKLNAIRKGLDDVYRDVAEDLGVAMDG 1130
Query: 402 KTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQR 458
K + EN+P G +R+T K + + + Y L G+ F +L N Q +
Sbjct: 1131 KVLHFENNPTYGQVFRLTRKESAKLKGKPGYIDLANKTNGLTFTTKKLKALNEDQQDCKE 1190
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
Y Q S+V+EV+ I+A Y L L+ +A DV+VS S + A PYV+P + G
Sbjct: 1191 SYTRKQSSLVKEVVAIAASYDTILEDLNTTIADLDVIVSLSHVAVNAVGPYVKPKLHEKG 1250
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
G LV + RHP +E Q +S+I ND F GE F ++TG NMGGKSTYIR +G +
Sbjct: 1251 QGKLVFREARHPCLEAQDDISFIANDHEFVRGESEFQIITGANMGGKSTYIRQVGCIALM 1310
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
A IG +VPC A + + D I RVGA DSQ +G+STFM EM ETAT++K T++SL+IID
Sbjct: 1311 ACIGSYVPCTEAELPIFDCILARVGAGDSQLKGVSTFMSEMLETATILKSATKDSLIIID 1370
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL--E 696
ELGRGTSTFDGFG+A +I+ +A + FTLFA+HFHEI L++ +P+ RN+ V AL E
Sbjct: 1371 ELGRGTSTFDGFGLAYAISEHIAKEIRAFTLFASHFHEITSLAQEVPSVRNMHVLALVEE 1430
Query: 697 QEDNL-----VLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
+ D+L LY+V+PG +S+G+H A++A +P+++++ A+
Sbjct: 1431 KPDSLTGRDVTFLYKVEPGISDQSFGIHVAQLARFPDEVIKLAK 1474
>gi|190407259|gb|EDV10526.1| DNA mismatch repair protein MSH2 [Saccharomyces cerevisiae RM11-1a]
gi|323335633|gb|EGA76916.1| Msh2p [Saccharomyces cerevisiae Vin13]
Length = 964
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/775 (33%), Positives = 426/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + DA+ D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L++ + K++
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920
>gi|349581080|dbj|GAA26238.1| K7_Msh2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 964
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/775 (33%), Positives = 426/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + DA+ D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERKTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L++ + K++
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920
>gi|42565226|ref|NP_566804.3| DNA mismatch repair protein Msh2 [Arabidopsis thaliana]
gi|3914056|sp|O24617.1|MSH2_ARATH RecName: Full=DNA mismatch repair protein MSH2; Short=AtMSH2;
AltName: Full=MutS protein homolog 2
gi|2522362|gb|AAB82649.1| MutS homolog 2 [Arabidopsis thaliana]
gi|2522364|gb|AAB82650.1| MutS homolog 2 [Arabidopsis thaliana]
gi|2547236|gb|AAB81282.1| DNA mismatch repair protein MSH2 [Arabidopsis thaliana]
gi|11994116|dbj|BAB01119.1| DNA mismatch repair protein MSH2 [Arabidopsis thaliana]
gi|332642591|gb|AEE76112.1| DNA mismatch repair protein Msh2 [Arabidopsis thaliana]
Length = 937
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 282/871 (32%), Positives = 453/871 (52%), Gaps = 115/871 (13%)
Query: 15 TIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLVNKSNLSCFSHILC 73
+RFF+R ++Y HGE++ I + + ++ +G L +V ++++ + L
Sbjct: 37 AVRFFDRKDYYTAHGENSVFIAKTYYHTTTALRQLGSGSNALSSVSISRNMFETIARDLL 96
Query: 74 VISEDKTLE-------------------------TVLTN--------------------- 87
+ D T+E + N
Sbjct: 97 LERNDHTVELYEGSGSNWRLVKTGSPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRC 156
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNK-IVTILD 146
+G+A VDL + + E DD ++NLE+ ++ KEC+ PAE N+ K + L+
Sbjct: 157 VIGMAYVDLTRRVLGLAEFLDDSRFTNLESSLIALGAKECIFPAESGKSNECKSLYDSLE 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R V +T RKK+EF DL D+ RLV+ + +++ L+ L AT L +L+++ E
Sbjct: 217 RCAVMITERKKHEFKGRDLDSDLKRLVKGNIEPVRD--LVSGFDL--ATPALGALLSFSE 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR-CRTP 265
L++NEDN F+I D ++ + SA M +L+V+ + T A SL G+++R C
Sbjct: 273 LLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALNVM--ESKTDANKNFSLFGLMNRTCTAG 330
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL W+KQPL DL+ I R V V R +L ++ L+ + D++ L + R
Sbjct: 331 MGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAGLRQDLRQH-LKRISDVERLLRSLER 389
Query: 326 KKAGLKDCYRVYEGVSQLP-----------------------------------KLISIL 350
++ GL+ ++Y+ +LP K I ++
Sbjct: 390 RRGGLQHIIKLYQSTIRLPFIKTAMQQYTGEFASLISERYLKKLEALSDQDHLGKFIDLV 449
Query: 351 ESLVQNVEASNLNTILSS-----LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIK 405
E V + N ++SS L SLK D+K+ + ++ E + TA L+L DK +K
Sbjct: 450 ECSVDLDQLENGEYMISSSYDTKLASLK--DQKELLEQQIHELHKKTAIELDLQVDKALK 507
Query: 406 LENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
L+ + Q G +RIT K + + ++ +L+T + GV+F + +L QYQ++ +Y
Sbjct: 508 LDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVVDDY 567
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ Q+ +V+ V+ +++ L+ +L++ DVL+SF+ + P PY RP + G
Sbjct: 568 RSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSFADLAASCPTPYCRPEITSSDAG 627
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+VL RHP VE Q V++IPND G+ F +VTGPNMGGKST+IR +GV V +AQ
Sbjct: 628 DIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVTGPNMGGKSTFIRQVGVIVLMAQ 687
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVPCD A+IS+ D IF RVGA D Q RG+STFM EM ETA+++K ++ SL+IIDEL
Sbjct: 688 VGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDEL 747
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV-------IPTFRNVQVS 693
GRGTST+DGFG+A +I L ++ TLFATHFHE+ L++ N VS
Sbjct: 748 GRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELTALAQANSEVSGNTVGVANFHVS 807
Query: 694 A-LEQED-NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-YSLDTKTP 750
A ++ E L +LY+V+PG+C +S+G+H A+ A +PE ++ AR+ E E +S +
Sbjct: 808 AHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSSMII 867
Query: 751 SGDETNNRE--EEYFKTVQEGEYQMFDFLQQ 779
+ +E+ R+ E+ V G + FL++
Sbjct: 868 NNEESGKRKSREDDPDEVSRGAERAHKFLKE 898
>gi|357121225|ref|XP_003562321.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
MSH2-like [Brachypodium distachyon]
Length = 942
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 272/867 (31%), Positives = 445/867 (51%), Gaps = 114/867 (13%)
Query: 4 YLFFFPQ--KSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLV 60
++ FF + K IRFF+R ++Y HGE+A I + + + ++ +G + +V V
Sbjct: 26 FISFFKKLPKDPRAIRFFDRRDYYTAHGENATFIAKTYYHTMTALRQLGSNSDGISSVSV 85
Query: 61 NKSNLSCFSHILCVISEDKTLE-------------------------TVLTNT------- 88
+++ + L + D TLE + TN
Sbjct: 86 SRAMFETIARNLLLERTDCTLELYEGSGSSWRLAKSGTPGNIGSFEDILFTNNDMQDSPV 145
Query: 89 --------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
+G++ VD+ +K + E P+D ++N+E+ +V KECLLPA++
Sbjct: 146 TVALFPVLRESQLYIGLSFVDMTNRKLGLAEFPEDSRFTNVESALVALGCKECLLPADFE 205
Query: 135 ND-NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
+ + + + V +T RKK +F DL+QD+ R++R +++ LL +
Sbjct: 206 KPIDLQPLQDAISKCSVLLTERKKADFKSRDLVQDLGRIIRGSVEPVRD--LLSQ--FDY 261
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A L +L++Y EL+ ++ N ++I + + +Y+ + SA M +L++ +G T A
Sbjct: 262 ALGALGALVSYAELLADDTNYGNYTIETYNLDRYMRLDSAAMRALNI--AEGKTDANKNF 319
Query: 254 SLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
SL G+++R C G RLL +W+KQPL D++ I R V + E R L + L+
Sbjct: 320 SLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFAEDPELRQGLRQ-QLKR 378
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYE---GVSQLP----------------KLISILESL 353
+ D+ L + ++ A L+ ++Y+ G+S + + +S E
Sbjct: 379 ISDIDRLTHALRKRSANLQPVVKLYQSCRGISYIKDVLQQYNGQFSTLIRKRFVSSFEEW 438
Query: 354 VQNVEASNLNTILSSLQSLKMMDRKD-----------AVMDKMKEYLES--------TAR 394
+ + ++ + LK ++ + AV+ +E+ TA
Sbjct: 439 LTKNRYGRFSEMVETAIDLKQVENGEYRISPGYSSDLAVLKDELSEVENHINNSHMHTAT 498
Query: 395 RLNLVADKTIKLENSPQGFAYRIT----MKLNNSIDDRYTILDTVRGGVRFQDDRLATAN 450
L+L DK +KLE P G +RI+ K+ + Y I++T + GV+F +L
Sbjct: 499 DLDLSVDKQLKLEKGPFGHVFRISKKEEQKVRKKLTSSYIIIETRKDGVKFTSTKLKKLG 558
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
QYQA+ EY + Q+ IV++V+ IS +++ + ++++ DVL SF+ +T P PY+
Sbjct: 559 EQYQALLGEYTSCQKKIVDDVVRISCTFSEVFENFAAIISELDVLQSFADLATSCPVPYI 618
Query: 511 RPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
RP + G +VL RHP +E Q GV++IPND G+ F ++TGPNMGGKST+IR
Sbjct: 619 RPDITTSEEGDIVLQGSRHPCLEAQDGVNFIPNDCTLMRGKSWFQIITGPNMGGKSTFIR 678
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
+GV+V +AQIG FVPCD A+ISV D IF RVGA D Q RG+STFM EM ETA+++K +
Sbjct: 679 QVGVNVLMAQIGSFVPCDQASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAS 738
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS-------RV 683
E SL+IIDELGRGTST+DGFG+A +I L + TLFATHFHE+ L+ +
Sbjct: 739 EKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFATHFHELTALANKNGDQHQH 798
Query: 684 IP--TFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMK 739
+P N V A L +LY+V+PG+C +S+G+H A+ A +PE ++ A+ +
Sbjct: 799 VPDVGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAEFANFPEAVIALAKSKAE 858
Query: 740 EYE---YSLDTKTPSGDETNNREEEYF 763
E E + + S DE ++ + F
Sbjct: 859 ELEDFSAAPNFNDESNDEVGSKRKRVF 885
>gi|323352314|gb|EGA84849.1| Msh2p [Saccharomyces cerevisiae VL3]
Length = 964
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 259/769 (33%), Positives = 423/769 (55%), Gaps = 87/769 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + DA+ D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCL 781
A+ E + D KT +E + + + V EG ++ L++ +
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWI 914
>gi|259149396|emb|CAY86200.1| Msh2p [Saccharomyces cerevisiae EC1118]
Length = 964
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 259/775 (33%), Positives = 426/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + DA+ D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT ++S VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKISLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L++ + K++
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920
>gi|71017883|ref|XP_759172.1| hypothetical protein UM03025.1 [Ustilago maydis 521]
gi|46098793|gb|EAK84026.1| hypothetical protein UM03025.1 [Ustilago maydis 521]
Length = 963
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 275/852 (32%), Positives = 449/852 (52%), Gaps = 112/852 (13%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGED----AELIQRKSNVVYLVKTMGQKDKTLETVLVN-- 61
P+ + T+R F+R +FY HG+D A L+ + + + + + G+ + L ++ ++
Sbjct: 34 MPKPTPGTLRLFDRSDFYSAHGDDAILIANLVFKTHSALKYLGSGGKDNGGLPSITLSVA 93
Query: 62 --------------------------------------KSNLSCFSHILCV----ISEDK 79
NL ++ V +S
Sbjct: 94 ATKNLLREVLTSRQMRVEIYGNAGAKRNNQWSIVKQASPGNLQQMEDMIFVDADIVSSPI 153
Query: 80 TLETVLTN-----TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAE-- 132
+ LT TVG A D ++ + E ++D +SN E++I+Q KEC+LP +
Sbjct: 154 VMALKLTTRDGVKTVGAAFADATNRELCVSEYAENDLFSNTESLIIQLGVKECILPKDDK 213
Query: 133 YLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
++ + K+ +++R V M K+ +FS ++ QD+ RL++ + L L E+ L
Sbjct: 214 GVDADLKKLREVIERCGVVMFDSKRADFSGRNIDQDLRRLLKEESCGLN----LTELDLK 269
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A +L++YL L+ +E N Q+SI + D S+Y+ + ++ + +L++ P+ G T +
Sbjct: 270 LAMAAASALMSYLALLTDESNFGQYSIRTHDLSQYLRLDNSALRALNLFPEPGQTGSSKN 329
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
S+ G+L+RCRT QG RLL QW+KQPL ++ AI +R V + VN+ R + L+
Sbjct: 330 TSIYGLLNRCRTGQGQRLLGQWLKQPLVNVHAIEQRQNLVELFVNDNSTRQLIQNDYLKL 389
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL-------ESLVQNVEASNLNTI 365
+PDM ++ R + A L+D RVY+ + +LP LI L E+L + ++ S L+
Sbjct: 390 MPDMHRISKRFQKGIATLEDVVRVYQAILRLPGLIQTLADMETPSEALSELLKTSYLDPF 449
Query: 366 LSSLQSL-KMMDRKDAVMD--------------------KMKEYLEST-----------A 393
+ +L K + +A +D ++KE L+ T
Sbjct: 450 EAHRAALTKFNELVEATLDLTELSQHNFVIKPDFDDNLREIKEALDDTRDKLDEQHRLAG 509
Query: 394 RRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDRYTILD--TVRGGVRFQDDRLATAN 450
+ L + +K + LEN G+ R+T + ++ +D TV+GG+ F ++ L
Sbjct: 510 KELRMDTEKKLHLENHHVYGYCLRVTRTDAGLVRNKKGYMDIATVKGGLYFTNEALRDLA 569
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
++ + Y Q +V+EVI I++ Y L +L+ VLA DV+VSF+ S AP PYV
Sbjct: 570 NDFKDLSERYSRSQSGLVKEVIQIASSYCPPLEKLNVVLAHLDVIVSFAHVSDSAPVPYV 629
Query: 511 RPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
+P + GT + V L + RHP +E+ +++I ND G+ F ++TGPNMGGKSTYI
Sbjct: 630 KPVVSEKGTNADVDLREARHPCLEVMDDINFISNDTEMVRGQSEFLVITGPNMGGKSTYI 689
Query: 570 RSIGVSVFLAQIGCFVPC-DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
R +G+ +AQIGCFVP A + V D I RVGA DSQ +G+STFM EM ETAT++K
Sbjct: 690 RQVGIIALMAQIGCFVPAAQGARLPVFDCILARVGAGDSQLKGVSTFMAEMLETATILKT 749
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR 688
T +SL+IIDELGRGTST+DGFG+A +I+ +A++ + LFATHFHE+ L+ P R
Sbjct: 750 ATSDSLIIIDELGRGTSTYDGFGLAWAISEWIATNIRCKCLFATHFHELTNLAAQQPHVR 809
Query: 689 NVQVSAL--------EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
N+ V AL Q+ ++ LLY+V+PG +S G++ A++A +P ++ A+ +E
Sbjct: 810 NLHVVALVKQKEGGSRQDRDITLLYKVQPGISDQSLGINVAELANFPPSVIALAKRKAEE 869
Query: 741 YE-YSLDTKTPS 751
E Y +D +T S
Sbjct: 870 LEDYDVDEQTAS 881
>gi|172002|gb|AAA34802.1| homologue of bacterial MutS protein [Saccharomyces cerevisiae]
Length = 966
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 259/775 (33%), Positives = 425/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVNELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + D + D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDTLRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L++ + K++
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920
>gi|6324482|ref|NP_014551.1| mismatch repair ATPase MSH2 [Saccharomyces cerevisiae S288c]
gi|2506880|sp|P25847.2|MSH2_YEAST RecName: Full=DNA mismatch repair protein MSH2; AltName: Full=MutS
protein homolog 2
gi|600468|emb|CAA58189.1| orf 00935 [Saccharomyces cerevisiae]
gi|1419934|emb|CAA99102.1| MSH2 [Saccharomyces cerevisiae]
gi|285814801|tpg|DAA10694.1| TPA: mismatch repair ATPase MSH2 [Saccharomyces cerevisiae S288c]
gi|392296738|gb|EIW07840.1| Msh2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 964
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 259/775 (33%), Positives = 425/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVNELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + D + D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDTLRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L++ + K++
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920
>gi|410077361|ref|XP_003956262.1| hypothetical protein KAFR_0C01330 [Kazachstania africana CBS 2517]
gi|372462846|emb|CCF57127.1| hypothetical protein KAFR_0C01330 [Kazachstania africana CBS 2517]
Length = 960
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 260/741 (35%), Positives = 413/741 (55%), Gaps = 85/741 (11%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK----NKIV 142
N +GVA +D K M +I D++ YSN+E+ ++Q KECL+ + N+N K+V
Sbjct: 156 NVIGVAFIDTSNFKIGMLDIVDNEVYSNVESFLIQLGVKECLIQDQRSNENSAVEFKKLV 215
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
++++R + K +EFSE+D+ D LV+ EL A LP+ + +L+
Sbjct: 216 SVIERCDCVASLLKNSEFSEKDVELD---LVKLLGDEL--ALSLPQKYSNISMGACNALL 270
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSA 249
YL+L+ E+ + ++ + +++ + ++ + +L++ PQ +S
Sbjct: 271 KYLQLVTEEEQIGKYELVEHSLKEFMKLDASAIKALNLFPQGPLQALGPSSIISMSPSSG 330
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
+SL +L+ C+T G RLL +W+KQPL DL+ I +RH V L++ E R L
Sbjct: 331 GKIESLFQLLNNCKTNAGIRLLNEWLKQPLTDLNLINQRHDLVEFLIDQLELRNMLQSDF 390
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASN-LNTI--- 365
L +PD++ + ++ KK GL+D +VY+ ++P++ +LES VQ+ + S +N++
Sbjct: 391 LPLIPDVRRITKKLS-KKGGLEDVLKVYQFSKRVPEIAQLLESFVQDTDISEEMNSLINA 449
Query: 366 ------------LSSLQSL---------------------------KMMDRKDAVMDKMK 386
LS LQ + + ++ D++ D++K
Sbjct: 450 TWLTPLKSHLDPLSKLQEMVETTVDLEAYDESNVYMIKVEFNEELASIRNKLDSLRDEIK 509
Query: 387 EYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR----YTILDTVRGGVRF 441
A L ++ +KLEN G+ R+T N++ + R Y L TV+ G+ F
Sbjct: 510 TIHLDAAEDLGFDPERKLKLENHHLHGWCMRLTR--NDAKELRKHKNYIELSTVKAGIFF 567
Query: 442 QDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIA 501
L + +Q+EY+ Q ++V+E++ I+ YT L +LS VLA DVL SF+
Sbjct: 568 STRELKEIANETAILQKEYDKQQSTLVKEIVNITLTYTPVLEKLSLVLANLDVLSSFAHT 627
Query: 502 STCAPKPYVRPCMKPMG-TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGP 560
S+ AP PYVRP M G T L RHP++E+Q +++I NDV ++G F ++TGP
Sbjct: 628 SSYAPIPYVRPKMYGFGSTRKTKLLGSRHPVLEMQDELTFIANDVVLENGTGEFLIITGP 687
Query: 561 NMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMK 620
NMGGKSTYIR +GV +AQIGCFVPCD A IS+VD I RVGA DSQ +G+STFM+EM
Sbjct: 688 NMGGKSTYIRQVGVISLMAQIGCFVPCDKAEISIVDAILCRVGAGDSQLKGVSTFMVEML 747
Query: 621 ETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALL 680
ETA+++K T+NSL+IIDELGRGT T+DGFG+A +IA +A++ F LFATHFHE+ L
Sbjct: 748 ETASILKNSTKNSLIIIDELGRGTGTYDGFGLAWAIAEHIAANIGCFALFATHFHELTTL 807
Query: 681 SRVIPTFRNVQVSA-LEQ-------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+ + +N+ V A +EQ D++ LLY+V+PG +S+G+H A++ +P+ ++
Sbjct: 808 ADKLANVKNMHVVAHIEQSESSHHDSDDITLLYKVEPGISDQSFGIHVAEVVQFPDKIIR 867
Query: 733 QARDLMKEYEYSLDTKTPSGD 753
A+ E E D K +G+
Sbjct: 868 MAKRKADELE---DLKKSNGE 885
>gi|254578468|ref|XP_002495220.1| ZYRO0B06160p [Zygosaccharomyces rouxii]
gi|238938110|emb|CAR26287.1| ZYRO0B06160p [Zygosaccharomyces rouxii]
Length = 957
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/786 (33%), Positives = 440/786 (55%), Gaps = 89/786 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP----AEYLNDNKNKIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q +ECLLP +E ++ KI+ +
Sbjct: 158 IGVAFIDTSNYKVGMLDIIDNEVYSNLESFLIQLGVRECLLPDMSKSESISSELKKIIGV 217
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
++R T K ++F+++D+ D+ LV D+ L LP + + C +L+NY
Sbjct: 218 IERCGCVSTLIKSSDFTDKDVELDLANLVG-DELSLS----LPRYSKSALSSC-GALLNY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST------------SAQTY 252
L+L+N +D + ++ + +++ + ++ + +L++ PQ + +
Sbjct: 272 LQLLNEQDQVGKYELIQHSLQEFMKLDASAIKALNLFPQTANQPFGPAAGISLGGAGTKV 331
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
SL +L+ CRT G RLL +W+KQPL D++ I +RH V+ L++ E R L L
Sbjct: 332 SSLFQLLNHCRTNAGVRLLNEWLKQPLTDVEQIEKRHILVDYLIDQLELRQILQTDHLPS 391
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQN----VEASNL--NTIL 366
+ D++ + ++ R L+D ++Y+ ++P++ +L S + + EA +L +T L
Sbjct: 392 VLDVRRITKKLNRN-GNLEDVLKIYQFGKKIPEIADLLSSFLDDDQGSAEAKSLVKSTWL 450
Query: 367 SSLQS--------LKMM-----------------------------DRKDAVMDKMKEYL 389
L S L+M+ D+ DA+ D++
Sbjct: 451 EPLMSHTEPLTKLLEMVETTVDLDAYEQHNGFMIKVELNEGLANIRDQLDALKDEINSIH 510
Query: 390 ESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR----YTILDTVRGGVRFQDD 444
TA L +K +KLEN G+ R+T N++ + R Y L TV+ G+ F
Sbjct: 511 LETAEDLGFDPEKKLKLENHHIHGWCMRLTR--NDARELRNHKEYLELSTVKAGIYFSTK 568
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+L ++ +Q+EY+ Q ++V+E++ I+ Y+ L +LS VLA DVL SF+ AS+
Sbjct: 569 KLKEIASETAVLQKEYDKQQSALVKEIVSITLTYSPVLEKLSLVLANLDVLCSFAHASSY 628
Query: 505 APKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
AP PY+RP M + T L RHP++E+Q V++I NDV +SG F ++TGPNMG
Sbjct: 629 APIPYIRPKMHGLETTRTTRLVASRHPVLEVQDDVTFIANDVNLESGVNDFLIITGPNMG 688
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTYIR +GV +AQIGCFVPC+ A I+VVD + RVGA DSQ +G+STFM+EM ETA
Sbjct: 689 GKSTYIRQVGVISLMAQIGCFVPCEEADIAVVDAVLCRVGAGDSQLKGVSTFMVEMLETA 748
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
+++K T+NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ L+
Sbjct: 749 SILKNATKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTALADK 808
Query: 684 IPTFRNVQVSA-LEQE-------DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
+P +N+QV A LE++ D++ LLY+V+PG +S+G++ A++ +P+ +++ A+
Sbjct: 809 LPNVKNMQVVAHLEKDQDGQNESDDITLLYKVEPGISDQSFGIYVAEVVQFPQKIVKMAK 868
Query: 736 DLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK--DTNRIL 793
E E + S D+ + R + + + EG ++ L+ ++ +Q+ D R L
Sbjct: 869 RKANELE-----ELKSHDQDSKRAKLSVEELNEGNQRLKTLLKDWVNQLRQQGLDDPRKL 923
Query: 794 HLQETQ 799
+++Q
Sbjct: 924 TEEDSQ 929
>gi|388853653|emb|CCF52621.1| probable DNA mismatch repair protein MSH2 [Ustilago hordei]
Length = 957
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 289/902 (32%), Positives = 460/902 (50%), Gaps = 126/902 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVH------------------------GEDA---- 32
F FF P+ S T+R F+R EFY H G+D
Sbjct: 27 FCQFFKSMPKSSAGTLRLFDRSEFYSAHGDDAILIANLVFKTHSALKYLGSGGKDKGLPS 86
Query: 33 --------------ELIQRKSNVVYLVKTMGQKDKTLETV-LVNKSNLSCFSHILCVISE 77
L R+ V T G+++ + + + NL ++ V ++
Sbjct: 87 ITLSVAATKNFLREALTTRQMRVEIYGNTGGKRNNSWTVIKQASPGNLQQMEDMIFVNAD 146
Query: 78 DKTLETVLT---------NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL 128
+ V+ TVG A D ++ + E ++D +SN E++I+Q KEC+
Sbjct: 147 IVSSPIVMALKMTTRDGVKTVGAAFADATNRELCVAEYAENDLFSNTESLIIQLGVKECI 206
Query: 129 LPAEYLNDNKN------KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN 182
LP D+K K+ +++R V M ++ +FS +++ QD+ RL+R + + +
Sbjct: 207 LP----KDDKGADLDLKKLREVVNRCGVVMFDNRRADFSGKNIEQDLRRLLREEAAGIT- 261
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
+PE+ L A +LI+YL L+ +E N Q++IH+ D S+Y+ + ++ + +L++ P
Sbjct: 262 ---VPELDLKVAMGAASALISYLALLTDELNFGQYTIHTHDLSQYLRLDNSALRALNLFP 318
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ G T + S+ G+L+RCRT QG RLL QW+KQPL ++ AI ER V I VN+ R
Sbjct: 319 EPGQTGSSKNTSVYGLLNRCRTGQGQRLLGQWLKQPLVNVHAIKERQNLVEIFVNDNNTR 378
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------ 350
L L+ +PDM ++ R + A L+D RVY+ V +L LI +L
Sbjct: 379 ELLQLDYLKLMPDMHRISKRFQKGVATLEDVVRVYQAVLRLSGLIQMLVDMETPSDTHQQ 438
Query: 351 -------ESLVQN----------VEAS-NLNTIL-----------SSLQSLKMMDRKDAV 381
E L Q+ VEA+ +LN + L+ +K + D
Sbjct: 439 LLETTYIEPLKQHDAALAKYAELVEATIDLNELTHHNFVIKPDFDDDLRQIK--EALDDT 496
Query: 382 MDKMKEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGG 438
DK+ E + L + +K + LEN G+ R+T + ++ Y+ + TV+GG
Sbjct: 497 RDKLDEQHRLAGKELKMDTEKKLHLENHHVYGYCLRVTRTDAGLVRNKKGYSDIATVKGG 556
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
+ F ++ L ++ + Y Q +V+EVI I++ Y L +L+ VLA DV+VSF
Sbjct: 557 LYFTNEALRDLANGFKDLSERYSRSQSGLVKEVIQIASSYCSPLEKLNVVLAHLDVIVSF 616
Query: 499 SIASTCAPKPYVRPCMKPMGTGS-LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLV 557
+ S AP PY +P + GT + L L RHP +E+ V++IPND G F ++
Sbjct: 617 AHVSENAPVPYTKPIVSEKGTNADLELRDARHPCLEVMDDVNFIPNDTEMVRGSSEFLVI 676
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS-ATISVVDQIFTRVGAADSQYRGISTFM 616
TGPNMGGKSTYIR +G+ +AQ+GCFVP ++ A + V D I RVGA DSQ +G+STFM
Sbjct: 677 TGPNMGGKSTYIRQVGIIALMAQVGCFVPAEAGAKLPVFDCILARVGAGDSQLKGVSTFM 736
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
EM ETAT++K T++SL+IIDELGRGTST+DGFG+A +I+ +A++ + FATHFHE
Sbjct: 737 AEMLETATILKTATKDSLIIIDELGRGTSTYDGFGLAWAISEWIATNIRCKCFFATHFHE 796
Query: 677 IALLSRVIPTFRNVQVSA--------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPE 728
+ L+ RN+ V A Q+ ++ LLY+V+PG +S G++ A++A +P
Sbjct: 797 LTNLASQQTHVRNLHVVAHVKQRQGGSRQDRDITLLYKVEPGISDQSLGINVAELANFPA 856
Query: 729 DMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKD 788
++ A+ +E E + SG + E +EG + +FL+ S ++Q+D
Sbjct: 857 SVIALAKRKAEELEDYDEDDPKSGKTVLDSLPE--DVTKEGAALIDEFLKTWASRTQQED 914
Query: 789 TN 790
Sbjct: 915 AG 916
>gi|365763167|gb|EHN04697.1| Msh2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 964
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 259/775 (33%), Positives = 425/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + DA+ D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ + +STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKXVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L++ + K++
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920
>gi|326515768|dbj|BAK07130.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 942
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 272/867 (31%), Positives = 440/867 (50%), Gaps = 114/867 (13%)
Query: 4 YLFFFPQ--KSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLV 60
++ FF + K IR F+R ++Y HGE+A I + + + ++ +G + +V V
Sbjct: 26 FISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMTALRQLGGNSDGISSVSV 85
Query: 61 NKSNLSCFSHILCVISEDKTLETV--------LTNT------------------------ 88
+++ + L + D TLE LT +
Sbjct: 86 SRAMFETIARNLLLDRTDHTLELYEGSGSSWRLTKSGTPGNIGSFEDILFANNDMQYSPV 145
Query: 89 --------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
V ++ VD+ +K + E P+D ++N+E+ +V KECLLPA++
Sbjct: 146 TVALFPVFREGQLYVALSFVDMTNRKLGLAEFPEDSRFTNVESALVALGCKECLLPADFE 205
Query: 135 ND-NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
+ + + + +T RKK EF D++QD+ R++R +++ LL +
Sbjct: 206 KSIDLQPLQDAISNCNILLTERKKAEFKSRDIVQDLGRIIRGSVEPIRD--LLSQ--FDY 261
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A L +L++Y EL+ ++ N ++I + +Y+ + SA + +L+++ +G T
Sbjct: 262 ALGALGALVSYAELLADDTNYGNYTIEKFNLDRYMRLDSAAVRALNIV--EGKTDVNKNF 319
Query: 254 SLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
SL G+++R C G RLL +W+KQPL D++ I R V + E L ++ L+
Sbjct: 320 SLFGLMNRTCTAGMGKRLLNKWLKQPLLDVNEINNRLDMVQAFAEDPELHHGLRQH-LKR 378
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL 372
+ D+ L + +K A L+ ++Y+ S +P + +L+ S + LSSL+
Sbjct: 379 ISDIDRLIHALRKKSANLQPVVKLYQSCSTIPYIKGVLQQYNGQFSTSVMTRFLSSLEEW 438
Query: 373 KMMDR--------KDAV-MDKMK--EYLES---------------------------TAR 394
+R K A+ +D++ EY S TA
Sbjct: 439 LTENRYGRFANLVKTAIDLDQVDNGEYRISPLYSPDLAVLKDELSEVENHINNLHMHTAT 498
Query: 395 RLNLVADKTIKLENSPQGFAYRIT----MKLNNSIDDRYTILDTVRGGVRFQDDRLATAN 450
L+L DK +KLE P G +RI+ K+ + Y I++T + GV+F +L
Sbjct: 499 DLDLSVDKQLKLEKGPFGHVFRISKKDEQKVRKKLTTNYIIIETRKDGVKFTSAKLKKLG 558
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
QYQ++ +Y + Q+ IV+ V+ +S +++ + ++++ DVL SF+ + P PYV
Sbjct: 559 DQYQSLLGDYTSCQKKIVDNVVQVSCTFSEVFENFAAIISELDVLQSFADLAVSCPVPYV 618
Query: 511 RPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
RP + G ++L RHP VE Q GV++IPND G+ F ++TGPNMGGKST+IR
Sbjct: 619 RPDITTSEEGDIILQGSRHPCVEAQDGVNFIPNDCTLARGKSWFQIITGPNMGGKSTFIR 678
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
+GV+V +AQ+G FVPCD A+ISV D IF RVGA D Q RG+STFM EM ETA+++K +
Sbjct: 679 QVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAS 738
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS-------RV 683
E SL+IIDELGRGTST+DGFG+A +I L + TLFATHFHE+ L+ +
Sbjct: 739 EKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFATHFHELTALANKNGDQHQH 798
Query: 684 IPTF--RNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMK 739
+P N V A L +LY+V+PGSC +S+G+H A+ A +PE ++ A+ +
Sbjct: 799 VPDLGIANYHVGAHIDPSSRKLTMLYKVEPGSCDQSFGIHVAEFANFPEAVIALAKSKAE 858
Query: 740 EYEYSLDTKTPSG---DETNNREEEYF 763
E E SG DE ++ + F
Sbjct: 859 ELEDFTSAPNLSGEPSDEVGSKRKRVF 885
>gi|365758493|gb|EHN00331.1| Msh2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 964
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/796 (33%), Positives = 437/796 (54%), Gaps = 92/796 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+G+A +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGIAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNPNSNTEIQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
LDR + +T + EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 LDRCECVITLLRNTEFSEKDVELDLIKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G T+A
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNTLAVSGFTNAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ CRT G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 TGKITSLFHLLNHCRTNAGVRLLNEWLKQPLTNIDEITKRHDLVDYLIDQIELRQMLTTD 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI----------SILESLVQNVE 358
L +PD++ L ++ K+ L+D ++Y+ ++P+++ S+ ESL + V
Sbjct: 392 FLPMIPDIRRLTKKLN-KRGSLEDVLKIYQFSKKIPEIVNLFNSFLEEGSLAESLKELVC 450
Query: 359 ASNLNTILSSLQSL---------------------------------KMMDRKDAVMDKM 385
++ L + ++ L K+ ++ DA+ +++
Sbjct: 451 STWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKIEFNEELTKIRNKLDALREEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVISSFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERKTHLVNSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +A F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIADKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQEDN--------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ N + LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNSNEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK---DT 789
A+ E + D KT +E + + + V EG ++ L++ + K++ D
Sbjct: 871 MAKRKANELD---DLKTT--NENLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEEGLDDP 925
Query: 790 NRILHLQETQEPGIEE 805
++I +ET + I+E
Sbjct: 926 SKI--SEETAQHKIQE 939
>gi|255712741|ref|XP_002552653.1| KLTH0C09988p [Lachancea thermotolerans]
gi|238934032|emb|CAR22215.1| KLTH0C09988p [Lachancea thermotolerans CBS 6340]
Length = 955
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/726 (34%), Positives = 400/726 (55%), Gaps = 81/726 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP----AEYLNDNKNKIVTI 144
+GV+ +D + K M +I D++ YSNLE+ ++Q KECLLP E + + K+V +
Sbjct: 157 LGVSFIDSSSYKIGMLDIVDNEVYSNLESFLIQMGVKECLLPDLRSNETVANELKKMVGV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLV--RFDDSELKNARLLPEMCLTTATHCLRSLI 202
LDR T K ++FS D+ QD+ +LV S +K + L C +L+
Sbjct: 217 LDRCGCVSTFVKNSDFSHRDVDQDLVKLVGDELSMSLMKFSNLALGSC--------NALL 268
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS-------- 254
+YL+L+N+E + ++ + ++++ + ++ + +L++ P S ++ S
Sbjct: 269 SYLQLLNDESQLGRYELVQHSLTEFMKLDASALKALNIFPTGPSGASGVSVSHGGGSGGK 328
Query: 255 ---LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
+ +L++C+T G RLL QW+KQPL DL AI RH V L++ E R L L
Sbjct: 329 VSSIFQLLNKCKTNAGVRLLNQWLKQPLTDLQAIQNRHDLVEFLIDQLELRQVLQSDYLP 388
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS 371
+PD++ L ++ K GL+D ++Y+ ++P++ +LE + N++ + L +
Sbjct: 389 LVPDVRRLTKKLN-KNGGLEDVLKIYQFARKIPEVSQVLEDYLGNMDGGDSIKPLVTETW 447
Query: 372 LKMMDRKDAVMDKMKEYLEST--------------------------------------- 392
L+ ++ +DK +E +E+T
Sbjct: 448 LQPLNAHITPLDKFQEMVETTVDLEAYEDTNEFMIKVDFNEDLAKIRGELDALKDNIKSI 507
Query: 393 ----ARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDR 445
A L +K +KLEN G+ R+T ++ +Y L TV+ G+ F
Sbjct: 508 HLDAAEDLGFDPEKKLKLENHHMHGWCMRLTRNDGKALRQHRKYLELTTVKAGIYFSTRE 567
Query: 446 LATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCA 505
L Q +Q+EY+ Q +V+E++ I+ YT L +LS VLA DVL +F+ S+ A
Sbjct: 568 LKQIAEQTAILQKEYDRLQYDLVKEIVQITLTYTPVLEKLSIVLANLDVLSAFAHVSSYA 627
Query: 506 PKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
P PYVRP M +GT L RHP++E V++I NDV +SG+ F ++TGPNMGG
Sbjct: 628 PIPYVRPQMHGLGTQRKTELIGSRHPVLETLDDVTFISNDVRLESGKSEFLIITGPNMGG 687
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR +GV +AQIGCFVPCD+A I+VVD + RVGA DSQ +G+STFM+EM ETA+
Sbjct: 688 KSTYIRQVGVISLMAQIGCFVPCDTAEIAVVDAVLCRVGAGDSQLKGVSTFMVEMLETAS 747
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
++K TENSL+I+DELGRGTST+DGFG+A SI+ +A + + F LFATHFHE+ L+ +
Sbjct: 748 ILKNATENSLIIVDELGRGTSTYDGFGLAWSISEHIARNVRCFALFATHFHELTSLADQV 807
Query: 685 PTFRNVQV--------SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
PT +N+ V ++ D++ LLY+V+PG +S+G+H A++ +P ++ A+
Sbjct: 808 PTVQNMHVIAHIEDARASTHSADDITLLYKVEPGISDQSFGIHVAEVVQFPAKLVSMAKR 867
Query: 737 LMKEYE 742
E E
Sbjct: 868 KAAELE 873
>gi|401840373|gb|EJT43216.1| MSH2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 964
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 265/796 (33%), Positives = 437/796 (54%), Gaps = 92/796 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+G+A +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGIAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNPNSNTEIQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
LDR + +T + EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 LDRCECVVTLLRNTEFSEKDVELDLIKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G T+A
Sbjct: 272 LQLLSEQDQVGKYELVEHRLKEFMKLDASAIKALNLFPQGPQNPFGSNTLAVSGFTNAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ CRT G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 TGKITSLFHLLNHCRTNAGVRLLNEWLKQPLTNIDEITKRHDLVDYLIDQIELRQMLTTD 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI----------SILESLVQNVE 358
L +PD++ L ++ K+ L+D ++Y+ ++P+++ S+ ESL + V
Sbjct: 392 FLPMIPDIRRLTKKLN-KRGSLEDVLKIYQFSKKIPEIVNLFNSFLEEGSLAESLKELVC 450
Query: 359 ASNLNTILSSLQSL---------------------------------KMMDRKDAVMDKM 385
++ L + ++ L K+ ++ DA+ +++
Sbjct: 451 STWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKIEFNEELAKIRNKLDALREEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVISSFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERKTHLVNSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +A F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIADKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQEDN--------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ N + LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNSNEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK---DT 789
A+ E + D KT + D + + + V EG ++ L++ + K++ D
Sbjct: 871 MAKRKANELD---DLKTTNEDL--KKAKLSLQEVNEGNIRLKALLKEWIRKVKEEGLDDP 925
Query: 790 NRILHLQETQEPGIEE 805
++I +ET + I+E
Sbjct: 926 SKI--SEETAQHKIQE 939
>gi|207341422|gb|EDZ69483.1| YOL090Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 872
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 249/722 (34%), Positives = 402/722 (55%), Gaps = 82/722 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + DA+ D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QA 734
Sbjct: 871 MG 872
>gi|340730331|gb|AEK64794.1| Msh2 [Schmidtea mediterranea]
Length = 884
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 275/847 (32%), Positives = 449/847 (53%), Gaps = 119/847 (14%)
Query: 1 HKFYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVV------------Y 43
+ F LF+ K +TIRFF+R ++Y VH EDAE++ R KS + Y
Sbjct: 6 NSFSLFWNSLGDKPNSTIRFFDRQDYYTVHFEDAEMLARSYYKSMEILKYFRRDSVSSPY 65
Query: 44 LVKTMGQKDKTLETVLV-----------NKS-------------NLSCFSHILCVISEDK 79
+ + D + +L+ NKS NL + IL K
Sbjct: 66 INISKSNSDGVFKYLLIANQYKVEVYSNNKSHDSWDLDFVATPGNLEKYQDILF-----K 120
Query: 80 TLETVLTNT--------------VGVAIVDLDTKKFYMGEIPDD----DYYSNLEAIIVQ 121
+E V +N+ + + DLD F +G + + +NL + + Q
Sbjct: 121 DVELVSSNSLLGLNIKRINDDYRIFLGFCDLDNGIFMIGGFEESFTGYEQLANLSSALFQ 180
Query: 122 KSPKECLLPAEYLNDNKNKIVTI---LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDS 178
+ +ECL+P ND + +++ + + + +T KK+ FS E++M + +L+ +
Sbjct: 181 LNCRECLIP----NDTRPELLAVKNAVQSAGLLVTEVKKSFFSSENVMNSILKLIC--KT 234
Query: 179 ELKNARLLPEMCLTTATH---CLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVM 235
+L N + ++ T CL S+I YL+L N+E N F + + Y+ +
Sbjct: 235 KLNNENTVLKLVDTEGAETIGCLGSVITYLDLANDESFFNFFDVQTFKLDNYMRVGEQCS 294
Query: 236 SSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNIL 295
+L++LP + +DSL G+L+ CRT G RLL QW+KQPL D++ I R V L
Sbjct: 295 RALNILP--SPNDLRKHDSLYGLLNCCRTASGERLLLQWIKQPLMDVNLINNRLDIVESL 352
Query: 296 VNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL----- 350
+N+ + R L+E LR +PD+Q + R+ R K L+D Y++Y + Q ++++L
Sbjct: 353 INDNKLRGCLYEENLRRIPDLQRITRRLQRNKGNLQDIYKLYVALRQASDMLNLLNEHNG 412
Query: 351 --ESLVQNVEASNLNTILSSLQSLKMM-------------------DRKDAV------MD 383
+ ++Q+ +S + IL ++ M D +++ M
Sbjct: 413 PYKCIIQSELSSVIQEILKDTENFIQMFTSFFDFEAVKNHEFKVKCDVDESLKECENSMI 472
Query: 384 KMKEYLESTARR----LNLVADKTIKLENSPQ-GFAYRITMKLNNSIDDR--YTILDTVR 436
+K +E+ + R L + + K +K E+S G+ R++ K N + ++ +I++T++
Sbjct: 473 TLKSQMETESSRVSDKLGIESTKQLKFESSNSLGYYMRVSRKDENVLRNKSFISIIETLK 532
Query: 437 GGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLV 496
GV+F ++ N Y +R+YE +++SI+EE++ I+ Y +L+QLS ++A+ DVL
Sbjct: 533 DGVKFHSTQMTLMNESYLQHRRDYEEYERSIIEEIMKITNKYVGSLHQLSSIIAKLDVLC 592
Query: 497 SFSIASTCAPKPYVRP-CMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFN 555
S + AP Y RP + T + CRHP+VE+Q +SYI ND+ F +F
Sbjct: 593 SLATMVCGAPGTYARPKVVDDCKTRVFKVKNCRHPLVEMQNNMSYIANDISFDESR-TFQ 651
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
++TGPNMGGKSTYIRSIG+ +AQIG FVPCD A IS+ D+I TR+GA D Q G+STF
Sbjct: 652 IITGPNMGGKSTYIRSIGLISVMAQIGSFVPCDGAEISIFDRIMTRIGAGDCQLTGVSTF 711
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M EM + + ++K T SL+IIDELGRGTSTFDGFG+A SI+ +A+ + F+ FATHFH
Sbjct: 712 MAEMLDISWILKTATSKSLIIIDELGRGTSTFDGFGLAWSISEHIATELKAFSAFATHFH 771
Query: 676 EIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
E+ LS++ N+ V+A + L+ +Y+V+ G V+SYG+ AK +G P++ ++ A+
Sbjct: 772 ELTDLSKIHCNVNNLHVTAQTIGNELIFMYKVEEGPAVRSYGIEVAKASGLPDESIKLAK 831
Query: 736 DLMKEYE 742
+ EYE
Sbjct: 832 LKLSEYE 838
>gi|168053439|ref|XP_001779144.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669504|gb|EDQ56090.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 956
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 278/860 (32%), Positives = 444/860 (51%), Gaps = 125/860 (14%)
Query: 4 YLFFFPQ--KSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLV 60
++ FF + +++ +RFF+R +++ HG++A I + +++ +G +L V +
Sbjct: 27 FISFFRRLPENEQAVRFFDRKDYFTAHGDNATFIASTYYRTLTVLRQLGSGADSLPGVTI 86
Query: 61 NKS-------------------------------------NLSCFSHILCVISEDKTLET 83
NKS L F +L +E +
Sbjct: 87 NKSMFETIVRDLLLERTDCTVELYEGTGSKWQLVRSGSPGKLGSFEEVLFASNEMQETPV 146
Query: 84 VLT---------NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL--LPAE 132
V+ VG+A VD+ ++ M E DDD Y++LE+ +V S +EC+ +P
Sbjct: 147 VMAVNITTRQSERCVGIAFVDMTKRQLGMTEFLDDDLYTSLESAMVALSCRECIIPMPTA 206
Query: 133 YLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+ + K+ ++ R V +T +KK++F D+ QD+ RLV+ + K
Sbjct: 207 AKSPDDRKLRDVMARCNVLVTEKKKSDFRSRDVEQDLGRLVKGPAEQHKEL----VAASD 262
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A L +L+ Y EL++++ N ++ I Y+ + +A + +L+V + T + +
Sbjct: 263 LAAAALAALLTYTELLSDDTNYGKYVIQPYSLDLYMRLDAAALRALNV--TESKTDSNKH 320
Query: 253 DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+++R C G RLL +W+KQPL D+ I +R V V + E R +L + LR
Sbjct: 321 FSLFGLMNRTCTQGMGKRLLNRWLKQPLVDVVEITKRLDTVQAFVEDLELRQDLRSH-LR 379
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP--------------------------- 344
+PD++ L ++ ++KAGL+D R+Y+ +LP
Sbjct: 380 RMPDIERLVSKLEKRKAGLQDVVRLYQASLRLPLIRTCLEKYDGEFSKDLQEKYGTHLDV 439
Query: 345 --------KLISILESLVQNVEASNLNTILS-----SLQSLKMMDRKDAVMDKMKEYLES 391
K ++E+ V + N I+S SLQ LK +D V ++ + +
Sbjct: 440 WTQPNHLGKFDGLVEAAVDLEQLQNGEYIISADYDNSLQELKTG--RDDVERQILKVHQQ 497
Query: 392 TARRLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRL 446
+A L L A+K++KL+ S Q G +RIT K + ++ +Y L+T + G++F + +L
Sbjct: 498 SADDLGLPAEKSLKLDKSTQYGHVFRITKKEEPKVRKKLNSQYITLETRKDGIKFTNAKL 557
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT-----LNQLSDVLAQFDVLVSFSIA 501
+ QY + EY + Q+ +V +V+ ++A + + + ++ +LA DVL+SF+
Sbjct: 558 RRLSEQYTKLTEEYSSAQRELVAKVVDVAATFVEASFSTIFSGVAVLLADMDVLLSFADL 617
Query: 502 STCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
++C+P PYVRP + G ++L RHP VE Q V++I ND G+ F ++TGPN
Sbjct: 618 ASCSPVPYVRPSITSADEGDIILEGSRHPCVEAQDDVNFISNDCRLVRGKSWFQIITGPN 677
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKST+IR +GV+V +AQ+GCFVPCD A ISV D IF RVGA D Q RG+STFM EM E
Sbjct: 678 MGGKSTFIRQVGVNVLMAQVGCFVPCDRAEISVRDCIFARVGAGDCQLRGVSTFMAEMLE 737
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALL- 680
TA++IK TE SL+IIDELGRGTST+DGFG+A +I L + TLFATHFHE+ L
Sbjct: 738 TASIIKSATERSLIIIDELGRGTSTYDGFGLAWAICEYLVEVTRAPTLFATHFHELTALE 797
Query: 681 -SRVIPT----------FRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYP 727
S P N VSA + L +LY+V+ G C +S+G+H A+ A +P
Sbjct: 798 HSNSPPVHGPPRGPLVGIANYHVSAHIDTKSQKLAMLYKVEEGPCDQSFGIHVAEFAHFP 857
Query: 728 EDMLEQARDLMKEYEYSLDT 747
E ++E A+ E E DT
Sbjct: 858 ESVVELAKQKAAELEDFSDT 877
>gi|71835971|gb|AAZ42361.1| DNA mismatch repair protein MSH2 [Physcomitrella patens]
Length = 951
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 276/853 (32%), Positives = 443/853 (51%), Gaps = 116/853 (13%)
Query: 4 YLFFFPQ--KSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLV 60
++ FF + +++ +RFF+R +++ HG++A I + +++ +G +L V +
Sbjct: 27 FISFFRRLPENEQAVRFFDRRDYFTAHGDNATFIASTYYRTLTVLRQLGSGADSLPGVTI 86
Query: 61 NKS-------------------------------------NLSCFSHILCVISEDKTLET 83
NKS L F +L +E +
Sbjct: 87 NKSMFETIVRDLLLERTDCTVELYEGTGSKWQLVRSGSPGKLGSFEEVLFASNEMQETPV 146
Query: 84 VLT---------NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL--LPAE 132
V+ VG+A VD+ ++ M E DDD Y++LE+ +V S +EC+ +P
Sbjct: 147 VMAVNITTRQSERCVGIAFVDMTKRQLGMTEFLDDDLYTSLESAMVALSCRECIIPMPTA 206
Query: 133 YLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+ + K+ ++ R V +T +KK++F D+ QD+ RLV+ + K
Sbjct: 207 AKSPDDRKLRDVMARCNVLVTEKKKSDFRSRDVEQDLGRLVKGPAEQHKEL----VAASD 262
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A L +L+ Y EL++++ N ++ I Y+ + +A + +L+V + T + +
Sbjct: 263 LAAAALAALLTYTELLSDDTNYGKYVIQPYSLDLYMRLDAAALRALNV--TESKTDSNKH 320
Query: 253 DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+++R C G RLL +W+KQPL D+ I +R V V + E R +L + LR
Sbjct: 321 LSLFGLMNRTCTQGMGKRLLNRWLKQPLVDVVEITKRLDTVQAFVEDLELRQDLRSH-LR 379
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-------VQNVEASNLNT 364
+PD++ L ++ ++KAGL+D R+Y+ +LP + + LE +Q ++L+
Sbjct: 380 RMPDIERLVSKLEKRKAGLQDVVRLYQASLRLPLIRTCLEKYDGEFSKDLQEKYGAHLDV 439
Query: 365 ILSSLQSLKMMDRKDAVMD----KMKEYL------------ESTARR------------- 395
K +A +D + EY+ ++ ARR
Sbjct: 440 WTQPNHLGKFDGLVEAAVDLEQLQNGEYIYFSRLCQQSSRAQNWARRCERQILKVHQQSA 499
Query: 396 --LNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLAT 448
L L A+K++KL+ S Q G +RIT K + ++ +Y L+T + G++F + +L
Sbjct: 500 DDLGLPAEKSLKLDKSTQYGHVFRITKKEEPKVRKKLNSQYITLETRKDGIKFTNAKLRR 559
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+ QY + EY + Q+ +V +V+ ++A + + + ++ +LA DVL+SF+ ++C+P P
Sbjct: 560 LSEQYTKLTEEYSSAQRELVAKVVDVAATFVEIFSGVAVLLADMDVLLSFADLASCSPVP 619
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
YVRP + G ++L RHP VE Q V++I ND G+ F ++TGPNMGGKST+
Sbjct: 620 YVRPSITSADEGDIILEGSRHPCVEAQDDVNFISNDCRLVRGKSWFQIITGPNMGGKSTF 679
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR +GV+V +AQ+GCFVPCD A ISV D IF RVGA D Q RG+STFM EM ETA++IK
Sbjct: 680 IRQVGVNVLMAQVGCFVPCDRAEISVRDCIFARVGAGDCQLRGVSTFMAEMLETASIIKS 739
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALL--SRVIPT 686
TE SL+IIDELGRGTST+DGFG+A +I L + TLFATHFHE+ L S P
Sbjct: 740 ATERSLIIIDELGRGTSTYDGFGLAWAICEYLVEVTRAPTLFATHFHELTALEHSNSPPV 799
Query: 687 ----------FRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
N VSA + L +LY+V+ G C +S+G+H A+ A +PE ++E A
Sbjct: 800 HGPPRGPLVGIANYHVSAHIDTKSQKLAMLYKVEEGPCDQSFGIHVAEFAHFPESVVELA 859
Query: 735 RDLMKEYEYSLDT 747
+ E E DT
Sbjct: 860 KQKAAELEDFSDT 872
>gi|384248011|gb|EIE21496.1| DNA mismatch repair protein [Coccomyxa subellipsoidea C-169]
Length = 909
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 286/837 (34%), Positives = 421/837 (50%), Gaps = 117/837 (13%)
Query: 14 TTIRFFNRVEFYCVHGEDAELIQRK-SNVVYLVKTMGQKDKTLETVLVNKSNL--SCFSH 70
T +RFF+R +FY VHGE+A I R +VK MG L V +NK NL + H
Sbjct: 33 TLVRFFDRKDFYSVHGENALFIARTFYKTTAVVKYMGGSATGLPGVTLNK-NLFETAVRH 91
Query: 71 ILCVISE-------------DKTLETV----------------LTN-------------- 87
+L +E KT E +T+
Sbjct: 92 LLVESAEYSVQMFEGSGTQWRKTREASPGKLGAFEEELFRNVDMTDVPVVAALLLGYSEG 151
Query: 88 --TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAE----YLNDNKNKI 141
TVG+A D ++ E DD+Y+ EA+++Q KE +LP E + + ++
Sbjct: 152 ARTVGIAFADAAGRRLGACEFADDEYFCATEAVLLQLGAKEVVLPKESEAAAQSADAGRL 211
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
++ R + R + F +L QD+ RL+R + E R + E L +A L ++
Sbjct: 212 RDVVARCNALGSERPRAAFGTRNLEQDLGRLLRSGNVE--QHRDVLERPLASAA--LAAV 267
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
I + ++M + ++S+ D +Y+ + A +L+V+ Q+ T A SL G++++
Sbjct: 268 IAFSDVMAVDSGHGKWSLALYDTGRYMRLDVAAQRALNVMKQR--TDANDSFSLYGLMNK 325
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
RT RLL W+KQPL DL I ERH V + R L LRGLPD++ L
Sbjct: 326 GRTAMAKRLLKVWLKQPLVDLTEITERHDIVEAFAEDPTLRERLRNLHLRGLPDIERLTR 385
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKL-------------------------ISILESLVQN 356
++ RKKA L D ++Y S+LP + I+ S +
Sbjct: 386 KLERKKATLADMCQLYRASSRLPMMEEAFRDHDGPHAQLLATRYSLALWHIAAWPSTAHD 445
Query: 357 VE-----------ASNLNTIL----------SSLQSLKMMDRKDAVMDKMKEYLESTARR 395
E A +L+ I + LQ L+ + KD V + + E A
Sbjct: 446 DEHLAKFEELLEAAIDLDRIPDEYLICASYDADLQGLR--EEKDKVEATINKVAEDAADD 503
Query: 396 LNLVADKTIKLE----NSPQGFAYRITMKLNNSI-----DDRYTILDTVRGGVRFQDDRL 446
L L+ DKTIKLE + + RIT + RY L+T + G +F + L
Sbjct: 504 LGLIMDKTIKLEWHKVANTRMRCLRITQTEEKKVRKKLQSGRYMTLETRKDGTKFTNRPL 563
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
A + QAI R Y+ Q ++VE+V+ ++A + + ++ ++A+ D+L F+ + CAP
Sbjct: 564 KEAAERLQAISRSYDQRQHALVEQVVSVAATFAEVWEGVAGMVAEMDLLAGFAELAVCAP 623
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP M P + L L CRHP VE Q GV +I ND + + G+ F ++TGPNM GKS
Sbjct: 624 LPYVRPTMLPADSSELKLTACRHPCVEAQDGVEFIANDCHMERGKSWFQVITGPNMAGKS 683
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR +GV+V +AQ+GCFV C+ A I+V D IF RVGA D Q RGISTFM EM ETA ++
Sbjct: 684 TYIRQVGVAVLMAQVGCFVACEHARIAVRDCIFARVGAGDCQLRGISTFMAEMLETAAIL 743
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI-ALLSRVIP 685
K + SLVIIDELGRGTST+DGFG+A +I+ L TLFATHFHE+ AL V
Sbjct: 744 KGASAKSLVIIDELGRGTSTYDGFGLAWAISEHLMQEIGCPTLFATHFHELTALQGPVGV 803
Query: 686 TFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++V+ + E L +LYQV G+C +S+G+H A+ A +P +++E A+ E E
Sbjct: 804 ANKHVETAIDEASGKLTMLYQVTEGACDQSFGIHVAEFARFPPEVVELAKRKAAELE 860
>gi|358394352|gb|EHK43745.1| hypothetical protein TRIATDRAFT_127655 [Trichoderma atroviride IMI
206040]
Length = 925
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 271/845 (32%), Positives = 417/845 (49%), Gaps = 123/845 (14%)
Query: 8 FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT-LETVLV----- 60
P +R F+R ++Y HGEDA I + +V+ +G+ D T L +V +
Sbjct: 22 LPDIGADAVRIFDRGDWYTAHGEDALFIAKTVYKTTSVVRQLGKNDHTGLPSVTMTMTVF 81
Query: 61 ----------------------NKSNLSCFSH----------------------ILCVIS 76
+ N C I+ V
Sbjct: 82 RQFLREALFKLGKRVEIWQSSSGRMNWKCIKQASPGNLQDVEDELGGQIDSAPMIMAVKI 141
Query: 77 EDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLND 136
K E VGV D ++ + E D+D YSN EA+++Q +ECL+ +Y +
Sbjct: 142 SAKASEA---RAVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGIRECLI--QYDKN 196
Query: 137 NKNK--------IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE 188
K K + +++ V + R +F +D+ QD+ RL++ + K+ +LP+
Sbjct: 197 EKEKERDPELAKLRQVINNCGVALAERPAGDFGIKDIEQDLARLLK----DEKSVAMLPQ 252
Query: 189 MCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--QQGS 246
L A LI Y+ + + N Q+ ++ D ++Y+ + +A + +L+++P + GS
Sbjct: 253 TDLKLAMGSAACLIKYIGALQDPSNFGQYQLYQHDLAQYMKLDAAALKALNLMPGLRDGS 312
Query: 247 TSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLH 306
+ Y G+L+ C+TP G RLLAQW+KQPL I +R V +TE R +
Sbjct: 313 KTMSIY----GVLNHCKTPVGSRLLAQWLKQPLMSKIEIEKRQQLVEAFFTDTELRQTMQ 368
Query: 307 EYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------EA- 359
E LR +PD+ L+ + R KA L+D R Y+ V +LP I LE ++ EA
Sbjct: 369 EEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLPGFIGTLEGIMDEAYKDPLDEAY 428
Query: 360 -SNLNTILSSL----------------------------QSLKMMDRK-DAVMDKMKEYL 389
+ L + SL QSL+++ +K D + +++
Sbjct: 429 TNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDQSLRVIRKKLDRLDHDIRQEF 488
Query: 390 ESTARRLNLVADKTIKLE--NSPQGFAYRITMKLNNSIDDRYTILD--TVRGGVRFQDDR 445
+S AR L ADK I LE + G R+T + I + L+ T + GV F +
Sbjct: 489 QSAARDLGQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGKSKYLECSTQKNGVYFTTKQ 548
Query: 446 LATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCA 505
L +Y + + Y Q S+V EV+ +++ Y L +L+ VLA DV+VS S A+ A
Sbjct: 549 LQAYRREYDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLAGVLAHLDVIVSLSHAAVHA 608
Query: 506 PKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGK 565
P YVRP + G G L RHP +ELQ V +I NDV + SF ++TGPNMGGK
Sbjct: 609 PDAYVRPKIHTRGEGQTKLLGARHPCMELQDDVQFITNDVELTRDQSSFIIITGPNMGGK 668
Query: 566 STYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATV 625
STYIR GV +AQ+G FVPC A +++ D I RVGA+DSQ +G+STFM EM ETA +
Sbjct: 669 STYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANI 728
Query: 626 IKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP 685
+K T SL+IIDELGRGTST+DGFG+A +I+ + F +FATHFHE+ L+ P
Sbjct: 729 LKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADQYP 788
Query: 686 TFRNVQVSA--------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
+N+ V+A + + + LLY+V+PG C +S+G+H A++ +P+ ++ A+
Sbjct: 789 QVKNMHVTAHISGTNGDVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRK 848
Query: 738 MKEYE 742
E E
Sbjct: 849 ADELE 853
>gi|344231603|gb|EGV63485.1| hypothetical protein CANTEDRAFT_123827 [Candida tenuis ATCC 10573]
Length = 952
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 258/763 (33%), Positives = 417/763 (54%), Gaps = 95/763 (12%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-----NKIVT 143
VGV +VDL + E D+D +SNLE++++Q KE ++P+ Y +NK NK+
Sbjct: 169 VGVCLVDLSNTSIRVSEFEDNDLFSNLESLLIQLGVKEVIVPSNYDPENKQLGDVNKLFQ 228
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELK---NARLLPEMCLTTATHCLRS 200
LD+ V M+ K + FS +DL QD+ +++ +D+ ++ A+ + + CL +
Sbjct: 229 TLDKVGVVMSTLKASFFSPKDLEQDLVKILSNEDTNVELILGAKGIASNDYQLSFACLNA 288
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--QQG----STSAQTYDS 254
LI YL L+ + + FSI D Y+ + S+ +++L++ P Q G + + S
Sbjct: 289 LIGYLGLLGDGEETKTFSIDKYDLESYMKLDSSTLNALNIFPIKQSGGYNMNIKSNQISS 348
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
+ +L++C+T G RLL+QW+KQPL D AI ER V L+N+T R+ + + + +P
Sbjct: 349 IFELLNKCKTNSGSRLLSQWLKQPLTDHIAISERQMLVEKLINDTNLRVFIDQEFMSQVP 408
Query: 315 DMQSLAMRI-------GRKKAGLKDCYRVYEGVSQLPKLISIL--------ESLVQNVEA 359
D++ L RI G+ L+D R+Y+ LP LI IL +SL +E
Sbjct: 409 DIKRLIKRINSNLKKNGQDNKKLEDVVRLYQLFLNLPNLIEILKMSSDDESDSLRTLIEK 468
Query: 360 SNLNTILSSLQSLKMM------------------------------DRKDAVMD------ 383
+ L + + L+ D + ++ D
Sbjct: 469 NWLEPVTEKFEKLRQFQGLVETAIDLSPLTSANTVSDLNTDFNINPDFEKSLKDVNRRLL 528
Query: 384 ----KMKEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR---YTILDTV 435
++K+ E A LN+ DK +KLEN + +R+T N+S+ R YT L TV
Sbjct: 529 QKEGEIKQQHELVADDLNIDIDKKLKLENHQIHNWCFRVTR--NDSVVLRGTNYTELQTV 586
Query: 436 RGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVL 495
+ GV F + L+ + ++ +I +EY Q+ I++E++ I+ + +LS L+Q DVL
Sbjct: 587 KAGVFFTNKELSALSKEHASILQEYNDKQKEIIQEILLITLTFETIFLELSTSLSQIDVL 646
Query: 496 VSFSIASTCAPKPYVRPCMKPM---------GTGSLVLNQCRHPIVELQGGVSYIPNDVY 546
++F+ S +P Y++P + P+ G + L RHPI+E Q +++IPNDV
Sbjct: 647 LAFANTSILSPIQYIKPNLVPLSERIDDETFGQRLVDLKNSRHPILEAQDDLNFIPNDVK 706
Query: 547 FKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS-ATISVVDQIFTRVGAA 605
+ + SF ++TGPNMGGKSTYIR +GV ++QIGCF+PCD T+ + D I +RVGA
Sbjct: 707 LSNKDKSFAIITGPNMGGKSTYIRQVGVIALMSQIGCFIPCDEPGTLPIFDSILSRVGAG 766
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
DSQ +G+STFM+EM ET++++ T NSL+IIDELGRGTST+DGFG+A SI+ + +Q
Sbjct: 767 DSQLKGLSTFMIEMLETSSILSNATHNSLIIIDELGRGTSTYDGFGLAYSISEYIIKSKQ 826
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSAL-EQEDNLVLLYQVKPGSCVKSYGVHCAKMA 724
FTLFATHFHE+ L+ +N+QV AL + + L+Y+V+PG KS+G++ A++
Sbjct: 827 CFTLFATHFHELTELNTKYDKIQNLQVKALIGNGEEITLVYKVEPGISSKSFGINVAELV 886
Query: 725 GYPEDMLEQARDLMKEYEYSLDTKTP---------SGDETNNR 758
+P+ ++ A+ E ++ + K+ S DET N+
Sbjct: 887 KFPQKIINMAKRKSSELQHEEEWKSSCFKDNRLLFSTDETINK 929
>gi|409075410|gb|EKM75790.1| hypothetical protein AGABI1DRAFT_131867 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 976
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/743 (33%), Positives = 408/743 (54%), Gaps = 87/743 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA------EYLNDNKNKIV 142
+GVA D ++ + + D+D +SN E++I+Q S KE +LP + + NK+
Sbjct: 174 IGVAFADTSVRELGVADFIDNDIFSNTESLIIQLSVKEAILPTGTSAGTTERDIDLNKMK 233
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDD--SELKNARLLPEMCLTTATHCLRS 200
+L+R V +T RK +EF +++ D+ RL++ S + + ++ L TA L +
Sbjct: 234 GVLERCGVVITERKPSEFRSKNIADDLPRLLQSQSPVSTADASATISQLSLPTAPAALSA 293
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS-LLGIL 259
L+ YL L+ ++ N+ + + + D S+Y+ + ++ + +L++ G+ ++ LLG+L
Sbjct: 294 LVQYLSLLTDDSNLGSYKLRTHDLSQYMKLDASALRALNLTENSGTVGLGAKNTTLLGLL 353
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNT------EARMNLHEYALRGL 313
++C+T QG RLL W+KQPL +L I +R V I N + +AR+ L+
Sbjct: 354 NKCKTSQGTRLLGTWIKQPLVNLHGIRKRQNLVEIFTNESTTRRILQARIKLY------- 406
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL---VQNVEASNLNTILSSLQ 370
+Q L R R A L+D R+Y+ V +LP +I+ LE++ Q+ +A+ LSSL+
Sbjct: 407 --LQRLGKRFKRGNASLEDVVRIYQVVLKLPGMITSLEAVQMVSQDYQAAIDEAYLSSLK 464
Query: 371 S-----------------LKMMDRKDAVM-----DKMKEYLESTAR-------------- 394
L +D + V+ +++++ E R
Sbjct: 465 EHDSHLKKYSEMVEATLDLDELDNHNYVIKPDYDERLQQLAEKLKRVRDGLDSEHTVVGD 524
Query: 395 RLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY 453
LN+ DK + LEN+ G+ +R+T + ++ L T + GV F L +Y
Sbjct: 525 DLNIELDKKLHLENNQVYGYCFRLTKTDAKGLSKKFIELGTNKSGVYFTTKTLKNLAEEY 584
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP- 512
+ + + Y Q +V+EV+ I+A Y L L +V+A DV++SF+ S AP PY++P
Sbjct: 585 KDLTQTYARTQNGLVKEVVNIAATYAPVLETLDNVVAHLDVILSFAHVSVSAPIPYIKPT 644
Query: 513 ----------CMKPM-----GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLV 557
C + + G+G+LVL + RHP +E+Q +++IPND+ F ++
Sbjct: 645 LLDKGIGFLSCGQYLAEYFEGSGNLVLREARHPCLEVQDEINFIPNDIEMVKDRSEFQII 704
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNMGGKSTYIR +GV +AQIGCFVPC+ A + V D + RVGA DSQ +G+STFM
Sbjct: 705 TGPNMGGKSTYIRHVGVIALMAQIGCFVPCEEAQLPVFDSVLCRVGAGDSQLKGVSTFMA 764
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM ETAT+++ +++SL+IIDELGRGTST+DGFG+A +I+ +A+ F LFATHFHE+
Sbjct: 765 EMLETATILRSASKDSLIIIDELGRGTSTYDGFGLAWAISEHIATKIHAFCLFATHFHEL 824
Query: 678 ALLSRVIPTFRNVQVSALEQED-------NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDM 730
L + + +N+ V A ++ ++ LLY+V+PG +S+G+H A++A +PE++
Sbjct: 825 TALDQQLSHVKNLHVVAHVTQNGSNIRDRDITLLYKVEPGISDQSFGIHVAELANFPENV 884
Query: 731 LEQARDLMKEYEYSLDTKTPSGD 753
++ A+ E E K GD
Sbjct: 885 VKLAKCKADELEDFTGEKKLDGD 907
>gi|449440909|ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cucumis sativus]
gi|449477104|ref|XP_004154930.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cucumis sativus]
Length = 938
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 280/882 (31%), Positives = 437/882 (49%), Gaps = 146/882 (16%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
F FF P S+ +RFF+R ++Y H ++A I + ++ +G + L +V
Sbjct: 24 FLAFFKTLPPDSRA-VRFFDRRDYYTAHSDNAVFIAKTYYRTTTALRQLGNASEALSSVS 82
Query: 60 VNKSNLSCFSHILCVISEDKTLE-------------------------TVLTNT------ 88
V+K+ + L + D TLE + N
Sbjct: 83 VSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSGSPGNIGSFEDVLFANNEMQDSP 142
Query: 89 ---------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
VG+ VDL + M E DD +++N+E+ +V KECLLP E
Sbjct: 143 AIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFIDDSHFTNVESALVGIGCKECLLPLES 202
Query: 134 LNDNKNK-IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
K + +L + V +T RKK+EF DL+QD++RL++
Sbjct: 203 GKSGDIKPLHDVLTKCGVMLTERKKSEFKMRDLVQDLSRLIK------------------ 244
Query: 193 TATHCLRSLINYLELMN--------------NEDNMNQFSIHSIDYSKYVHMSSAVMSSL 238
+ +R L++ E +E N ++I + Y+ + SA + +L
Sbjct: 245 GSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAAIRAL 304
Query: 239 HVLPQQGSTSAQTYDSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVN 297
+VL + T A SL G+++R C G RLL W+KQPL D+ I R V V
Sbjct: 305 NVL--ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAFVE 362
Query: 298 NTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP------------- 344
+T +L ++ L+ + D++ L + +++AGL+ ++Y+ +LP
Sbjct: 363 DTALCQDLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQF 421
Query: 345 ------KLISILESLVQNVEASNLNTILSSLQSLKMMDRK--------DAVMDKMKEYLE 390
K + LE+ N + N ++ + L ++ D + K+K E
Sbjct: 422 SSLIKEKYLEFLETCTDNDHLNKFNNLVETAVDLDQLENGEYMIASSYDDTLSKLKNVQE 481
Query: 391 S-----------TARRLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDT 434
S A L+L DK +KL+ Q G +RIT K + + + +L+T
Sbjct: 482 SIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLET 541
Query: 435 VRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDV 494
+ GV+F + +L QYQ I EY++ Q+ +V VI ++ + + L+++L++ DV
Sbjct: 542 RKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFRPLAELLSELDV 601
Query: 495 LVSFS-IASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVS 553
L+ F+ +AS+C P PY RP + G+++L RHP VE Q V++IPND G+
Sbjct: 602 LLGFADLASSC-PTPYTRPDITSSNEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
Query: 554 FNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIS 613
F ++TGPNMGGKST+IR +GV++ +AQ+GCFVPCD A+ISV D IF RVGA D Q RG+S
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
Query: 614 TFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATH 673
TFM EM ETA+++K TE SL+IIDELGRGTST+DGFG+A +I L + TLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
Query: 674 FHEIALLS----------RVIPTFRNVQVSALEQEDN--LVLLYQVKPGSCVKSYGVHCA 721
FHE+ L+ + + N VSA N L +LY+V+PG+C +S+G+H A
Sbjct: 781 FHELTALAHGNTDLDSHGKQMAGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
Query: 722 KMAGYPEDMLEQARDLMKEYE-YSLDTKTPSGDETNNREEEY 762
+ A +P ++ AR+ E E +S+DT T S R+ E+
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSIDT-TASTTNGKERKREF 881
>gi|344231602|gb|EGV63484.1| DNA mismatch repair protein [Candida tenuis ATCC 10573]
Length = 969
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 252/739 (34%), Positives = 408/739 (55%), Gaps = 86/739 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-----NKIVT 143
VGV +VDL + E D+D +SNLE++++Q KE ++P+ Y +NK NK+
Sbjct: 156 VGVCLVDLSNTSIRVSEFEDNDLFSNLESLLIQLGVKEVIVPSNYDPENKQLGDVNKLFQ 215
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELK---NARLLPEMCLTTATHCLRS 200
LD+ V M+ K + FS +DL QD+ +++ +D+ ++ A+ + + CL +
Sbjct: 216 TLDKVGVVMSTLKASFFSPKDLEQDLVKILSNEDTNVELILGAKGIASNDYQLSFACLNA 275
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--QQG----STSAQTYDS 254
LI YL L+ + + FSI D Y+ + S+ +++L++ P Q G + + S
Sbjct: 276 LIGYLGLLGDGEETKTFSIDKYDLESYMKLDSSTLNALNIFPIKQSGGYNMNIKSNQISS 335
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
+ +L++C+T G RLL+QW+KQPL D AI ER V L+N+T R+ + + + +P
Sbjct: 336 IFELLNKCKTNSGSRLLSQWLKQPLTDHIAISERQMLVEKLINDTNLRVFIDQEFMSQVP 395
Query: 315 DMQSLAMRI-------GRKKAGLKDCYRVYEGVSQLPKLISIL--------ESLVQNVEA 359
D++ L RI G+ L+D R+Y+ LP LI IL +SL +E
Sbjct: 396 DIKRLIKRINSNLKKNGQDNKKLEDVVRLYQLFLNLPNLIEILKMSSDDESDSLRTLIEK 455
Query: 360 SNLNTILSSLQSLKMM------------------------------DRKDAVMD------ 383
+ L + + L+ D + ++ D
Sbjct: 456 NWLEPVTEKFEKLRQFQGLVETAIDLSPLTSANTVSDLNTDFNINPDFEKSLKDVNRRLL 515
Query: 384 ----KMKEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR---YTILDTV 435
++K+ E A LN+ DK +KLEN + +R+T N+S+ R YT L TV
Sbjct: 516 QKEGEIKQQHELVADDLNIDIDKKLKLENHQIHNWCFRVTR--NDSVVLRGTNYTELQTV 573
Query: 436 RGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVL 495
+ GV F + L+ + ++ +I +EY Q+ I++E++ I+ + +LS L+Q DVL
Sbjct: 574 KAGVFFTNKELSALSKEHASILQEYNDKQKEIIQEILLITLTFETIFLELSTSLSQIDVL 633
Query: 496 VSFSIASTCAPKPYVRPCMKPM---------GTGSLVLNQCRHPIVELQGGVSYIPNDVY 546
++F+ S +P Y++P + P+ G + L RHPI+E Q +++IPNDV
Sbjct: 634 LAFANTSILSPIQYIKPNLVPLSERIDDETFGQRLVDLKNSRHPILEAQDDLNFIPNDVK 693
Query: 547 FKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS-ATISVVDQIFTRVGAA 605
+ + SF ++TGPNMGGKSTYIR +GV ++QIGCF+PCD T+ + D I +RVGA
Sbjct: 694 LSNKDKSFAIITGPNMGGKSTYIRQVGVIALMSQIGCFIPCDEPGTLPIFDSILSRVGAG 753
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
DSQ +G+STFM+EM ET++++ T NSL+IIDELGRGTST+DGFG+A SI+ + +Q
Sbjct: 754 DSQLKGLSTFMIEMLETSSILSNATHNSLIIIDELGRGTSTYDGFGLAYSISEYIIKSKQ 813
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSAL-EQEDNLVLLYQVKPGSCVKSYGVHCAKMA 724
FTLFATHFHE+ L+ +N+QV AL + + L+Y+V+PG KS+G++ A++
Sbjct: 814 CFTLFATHFHELTELNTKYDKIQNLQVKALIGNGEEITLVYKVEPGISSKSFGINVAELV 873
Query: 725 GYPEDMLEQARDLMKEYEY 743
+P+ ++ A+ E ++
Sbjct: 874 KFPQKIINMAKRKSSELQH 892
>gi|297734165|emb|CBI15412.3| unnamed protein product [Vitis vinifera]
Length = 945
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 282/859 (32%), Positives = 441/859 (51%), Gaps = 113/859 (13%)
Query: 4 YLFFFPQ--KSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLV 60
+L FF + +RFF+R ++Y HGE+A I + + ++ +G + +V V
Sbjct: 24 FLSFFKTLPRDPRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGSGSDGISSVSV 83
Query: 61 NKSNLSCFSHILCVISEDKTLE-------------------------TVLTN-------- 87
+K+ + L + D TLE + N
Sbjct: 84 SKNMFETIARNLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDVLFANNEMQDSPV 143
Query: 88 -------------TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
TVG+ VDL + + E DD ++N+E+ +V +ECLLP+E
Sbjct: 144 IVALFPNFRENGCTVGLGFVDLTRRVLGLAEFLDDSQFTNVESALVALGCRECLLPSESA 203
Query: 135 NDNKNKIV-TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTT 193
++ + + L R V +T RK+ EF DL+QD+ RLV+ ++ R L
Sbjct: 204 KSSETRTLHDALSRCGVMLTERKRTEFKARDLVQDLGRLVK---GSIEPVRDLVS-GFEL 259
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A L L++Y EL+ +E N F+I + Y+ + SA + +L+VL + T A
Sbjct: 260 APGALGLLLSYAELLADESNYGNFTIQRYNLDSYMRLDSAAVRALNVL--ESKTDANKNF 317
Query: 254 SLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
SL G+++R C G RLL W+KQPL D++ I R V V +T R +L ++ L+
Sbjct: 318 SLFGLMNRTCTAGMGKRLLHMWLKQPLVDVNEINCRQDLVQAFVEDTALRQDLRQH-LKR 376
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL-------ESLVQN--------- 356
+ D++ L + +++A L+ ++Y+ +LP + S L SL++
Sbjct: 377 ISDIERLLRTLEKRRASLQHVVKLYQSSIRLPYIKSALGQYDGQFSSLIKEKYLDPLESW 436
Query: 357 VEASNLNTI---------LSSLQSLKMM-----DRKDAVMDKMKEYLE--------STAR 394
+ +LN L+ L++ + M D K A + +E LE TA
Sbjct: 437 TDDDHLNRFIGLVEAAVDLNELENGEYMISSGYDAKLASLKNDQETLELQIHNLHKQTAI 496
Query: 395 RLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATA 449
L+L DK++KLE Q G +RIT K + + ++ +L+T + GV+F + +L
Sbjct: 497 DLDLPMDKSLKLEKGTQFGHVFRITKKEEPKIRKKLTAKFIVLETRKDGVKFTNTKLKKL 556
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
QYQ I EY+ Q+ +V V+ +A +++ L+ +L++ DVL+SF+ +T +P Y
Sbjct: 557 GDQYQKILDEYKDCQRELVVRVVQTAATFSEVFENLARLLSELDVLLSFADLATSSPTAY 616
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
RP + P G ++L RHP VE Q V++IPND + F ++TGPNMGGKST+I
Sbjct: 617 TRPEISPSHMGDIILEGSRHPCVEAQDWVNFIPNDCKLVREKSWFQIITGPNMGGKSTFI 676
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R +GV++ +AQ+G FVPCD A ISV D IF RVGA D Q RG+STFM EM ETA+++K
Sbjct: 677 RQVGVNILMAQVGSFVPCDKANISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 736
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS-------- 681
T+ SL+IIDELGRGTST+DGFG+A +I + + TLFATHFHE+ L+
Sbjct: 737 TDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALAHENTDHQP 796
Query: 682 --RVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
+ I N VSA L +LY+V+PG+C +S+G+H A+ A +PE ++ AR+
Sbjct: 797 PEKQIVGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 856
Query: 738 MKEYEYSLDTKTPSGDETN 756
E E T+ S D ++
Sbjct: 857 AAELEDFSPTEIVSNDASD 875
>gi|452981358|gb|EME81118.1| hypothetical protein MYCFIDRAFT_49240, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 929
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 252/712 (35%), Positives = 376/712 (52%), Gaps = 64/712 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTILD 146
VGV D ++ + E D+D YSN EA+I+Q KECL+ + + +K+ TI D
Sbjct: 149 VGVCFADASVRELGVSEFVDNDIYSNFEALIIQLGVKECLIQTDLSKKDAELHKLKTIAD 208
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
++ R +FS D QD+ RL+R + K LP+ L A +L+ YL
Sbjct: 209 NCNCAVSERPIGDFSARDTEQDLARLLR----DEKATAALPQTDLKLAMASAAALMKYLG 264
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+M++ N + ++ D ++Y+ + S+ + +L+++P G +L G+L+ C+TP
Sbjct: 265 IMSDPSNFGNYQLYQHDLTQYMKLDSSALKALNLMP--GPRHGSKTMNLFGLLNHCKTPV 322
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLLAQW+KQPL L+ I +R V VN+TE R L E LR +PD+ LA + RK
Sbjct: 323 GSRLLAQWLKQPLMSLEEIEKRQQLVEAFVNDTELRQTLQEEHLRSIPDLYRLAKKFQRK 382
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-----------LSSLQS---- 371
KA L+D R Y+ ++P I E ++ + L+ L+ LQ
Sbjct: 383 KANLEDVVRAYQVAIRIPDFIGTFEGVMDEAYKNALDETYTNKLRSYSDSLAKLQEMVET 442
Query: 372 ---LKMMDRKDAV---------------MDKMKEYLESTARR----LNLVADKTIKLENS 409
L+ +D + + +D ++ ++ R L L +K + LEN
Sbjct: 443 TVDLEALDHHEFIIKPEFDDTLRVIRKKLDTLRYNIDKEHERVGSDLGLDTEKKLLLENH 502
Query: 410 P-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ R+T + I + Y + T + G F +L ++ + Y Q
Sbjct: 503 RVHGWCLRLTRTEASVIRGKKHYPEIATQKNGTYFTTRKLQEMRREFDQLSENYNRTQSG 562
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+V EV+ ++A Y + QL+ VLA DV+VSF+ S AP YVRP + P GTGS L +
Sbjct: 563 LVNEVVNVAASYCPVIEQLAGVLAHLDVIVSFAHVSVHAPAAYVRPKIHPRGTGSTNLKE 622
Query: 527 CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP +E+Q V +I NDV F ++TGPNMGGKSTYIR IGV +AQIGCFVP
Sbjct: 623 ARHPCLEMQDDVQFITNDVTLARESSEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVP 682
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
C A +++ D I RVGA+DSQ +G+STFM EM ET+ ++K T+ SLVIIDELGRGTST
Sbjct: 683 CTEAELTLFDCILARVGASDSQLKGVSTFMAEMLETSNILKTATKESLVIIDELGRGTST 742
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL---EQEDN--- 700
+DGFG+A +I+ + F +FATHFHE+ L P +N+ V A E ED
Sbjct: 743 YDGFGLAWAISEHIIKEIGAFAMFATHFHELTALVDTYPQVQNLHVVAHISGEAEDTDMT 802
Query: 701 ----------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ LLY+V PG +S+G+H A++ +P+ ++ A+ E E
Sbjct: 803 NNGTSTRRREVTLLYKVIPGISDQSFGIHVAELVRFPQKVVNMAKRKADELE 854
>gi|444315884|ref|XP_004178599.1| hypothetical protein TBLA_0B02380 [Tetrapisispora blattae CBS 6284]
gi|387511639|emb|CCH59080.1| hypothetical protein TBLA_0B02380 [Tetrapisispora blattae CBS 6284]
Length = 959
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 274/860 (31%), Positives = 452/860 (52%), Gaps = 136/860 (15%)
Query: 3 FYLFFF--PQKSKTTIRFFNRVEFYCVHGEDAELIQ----------RKSN---------- 40
FY F P+K++ T+R +R ++Y GEDA I + +N
Sbjct: 19 FYRRFLSLPEKTQGTLRIVDRGDYYSAVGEDAVFISENIYHTQSVLKNANLDPNTLKSFH 78
Query: 41 ------------VVYLVKT----MGQK----DKTLETVL-VNKSNLSCFSHILCVISEDK 79
V L+KT MG K DK+ + + + N+ S ++ ++ +
Sbjct: 79 EPTKYVTMSLQIVGTLLKTALLDMGYKIEIYDKSWKLIKNASPGNIEQVSDLMNIVVDTS 138
Query: 80 TLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
+ + T+G + +D K M +I D++ YSNLE+ ++Q +ECL+P
Sbjct: 139 IIIASIKFQFNSQEGNCTIGTSFIDTTNFKIGMLDILDNEVYSNLESFLIQLGVRECLVP 198
Query: 131 AEYLNDNKN------KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNAR 184
L +N+N KI ++DR +T K +E+S +D+ D+ +LV EL A
Sbjct: 199 D--LTNNENVSAELKKITNVIDRCGAVVTFIKNSEYSNKDIESDLTKLV---GDELSLA- 252
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVL--- 241
LP+ + A R+LI+YL+L++ E+ + ++ I +++ + ++ + ++++
Sbjct: 253 -LPKKHSSLALGASRALIHYLQLLSEENQIGKYDILEHSLKEFMKLDASAIKAMNLFSQG 311
Query: 242 ------PQQG----STSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAA 291
P G + ++ SL +L+ C+T G RLL +W+KQPL DL I++RH
Sbjct: 312 PVQPFGPSLGNQLRTANSGKVTSLFQLLNHCKTNAGSRLLNEWLKQPLTDLSEILKRHDL 371
Query: 292 VNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE 351
V+ L++ E R L L G+PD++ LA ++ K L+D +VY+ ++P++ E
Sbjct: 372 VDYLIDQLELRQILQTDYLLGIPDIRRLAKKLN-KNGTLEDVLKVYQFSRKIPEITQAFE 430
Query: 352 SLVQN----------VEASNLNTILSSLQSL----------------------------- 372
S +++ V++ L + + + L
Sbjct: 431 SFLEDDSVEPKIKDLVKSEWLQPLTAHIDPLTKFQEMIETTVDLEVYEENNEYMIRVEFN 490
Query: 373 KMMDRKDAVMDKMKE-----YLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI- 425
+ + R +D++K +LE+ A L +K +KLEN G+ R+T +
Sbjct: 491 EELARIRQKLDELKNDIHTIHLEA-AEDLGFDPEKKLKLENHHLHGWCMRLTRTDAKELR 549
Query: 426 -DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQ 484
+Y L TV+ G+ F L + +Q+EY+ Q +V+E++ I+ Y+ L++
Sbjct: 550 KHKKYLELSTVKAGIYFSTKELREIAGETSTLQKEYDRQQAVLVKEIVNITLTYSPVLDR 609
Query: 485 LSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPN 543
LS VLA DVL +F+ S+ AP PY+RP M + L RHP++E+Q +++I N
Sbjct: 610 LSMVLANIDVLSAFAHVSSYAPIPYIRPTMHGFDSERRTYLKNSRHPVIEMQDDITFISN 669
Query: 544 DVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVG 603
DV +G F ++TGPNMGGKSTYIR +GV +AQIGCFVPC+ A I+VVD I RVG
Sbjct: 670 DVDLNNGSSDFLIITGPNMGGKSTYIRQVGVITLMAQIGCFVPCEEADIAVVDAILCRVG 729
Query: 604 AADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASH 663
A DSQ +G+STFM+EM ET++++K T NSL+I+DELGRGTST+DGFG+A +IA +AS
Sbjct: 730 AGDSQLKGVSTFMIEMLETSSILKNATSNSLIIVDELGRGTSTYDGFGLAWAIAEHIASK 789
Query: 664 RQPFTLFATHFHEIALLSRVIPTFRNVQVSA-LEQ-------EDNLVLLYQVKPGSCVKS 715
F LFATHFHE+ L+ +P +N+ V A +EQ D++ LLY+V+PG +S
Sbjct: 790 IGCFALFATHFHELTSLADNLPNVKNMHVVAHIEQGDESHSNSDDITLLYKVEPGISDQS 849
Query: 716 YGVHCAKMAGYPEDMLEQAR 735
+G+H A++ +P+ +++ A+
Sbjct: 850 FGIHVAEVVNFPQKIIKMAK 869
>gi|366997713|ref|XP_003683593.1| hypothetical protein TPHA_0A00740 [Tetrapisispora phaffii CBS 4417]
gi|357521888|emb|CCE61159.1| hypothetical protein TPHA_0A00740 [Tetrapisispora phaffii CBS 4417]
Length = 970
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 257/739 (34%), Positives = 403/739 (54%), Gaps = 95/739 (12%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLND-NKN---KIVTI 144
VG+A +D +K M +I D++ YSNLE+ ++Q +ECLLP N+ N N KI ++
Sbjct: 158 VGLAFIDAGNQKIGMLDIVDNEVYSNLESCLIQLGVRECLLPDLSKNEANINEIKKITSV 217
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
L+R T K +EF +D+ D+ +L+ D S LP+ A +L+NY
Sbjct: 218 LERCNCVATFIKNSEFQAKDVEMDLMKLLGNDLS-----LSLPKKFSNLALGACNALLNY 272
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY------------ 252
LE++ +D++ +F + + + + ++ + +L++ P + +AQ+Y
Sbjct: 273 LEILQGQDSLGKFELVEYSINNIMKLDASAVKALNLFP---NNNAQSYMQSNLAASNGYS 329
Query: 253 -------DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
SL +L+ C+T G RLL +W+KQPL DL I +RH V L++ E R L
Sbjct: 330 NSNESKISSLFQLLNNCKTKAGVRLLNEWLKQPLTDLAEINKRHDLVEFLIDQLELRETL 389
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEAS---NL 362
L +PD++ + ++ K L+D ++Y ++P ++ +LES + V+ + N+
Sbjct: 390 QTNYLPSIPDVRRITKKL-HKNGNLEDILKIYLFSKKIPDILQLLESFLDGVDGTVNKNI 448
Query: 363 NTILSSLQ----------------------SLKMMDRKDAVMDKMK-------------- 386
+++ L L+M + + M K++
Sbjct: 449 QELVTDLWIDPIQKHIEPLSKFEEMVETTVDLEMYESHNEFMIKVEFNEELAKLRMELDQ 508
Query: 387 -------EYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVR 436
+LE+ A L +K +KLEN G+ R+T + +Y L TV+
Sbjct: 509 LRNQITTAHLEA-AEDLGFDTEKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVK 567
Query: 437 GGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLV 496
G+ F L + +Q+EYE Q ++V E++GI+ YT L +LS VLA DVL
Sbjct: 568 AGIYFSTRELKEVAKETAILQKEYEKQQSALVREIVGITLTYTPVLEKLSLVLANQDVLC 627
Query: 497 SFSIASTCAPKPYVRPCMKPM-GTG-SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSF 554
SF+ AS+ AP PY+RP M + TG +L RHP++E+Q +++I ND+ + G F
Sbjct: 628 SFAHASSYAPIPYIRPTMHSLQDTGRKTILKGSRHPVLEVQDDLTFISNDISLEKGSSDF 687
Query: 555 NLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIST 614
++TGPNMGGKSTYIR IGV +AQIGCFVPCD A ISVVD I RVGA DSQ +G+ST
Sbjct: 688 LIITGPNMGGKSTYIRQIGVISLMAQIGCFVPCDEAEISVVDAILCRVGAGDSQLKGVST 747
Query: 615 FMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHF 674
FM+EM ET++++K T NSL+I+DELGRGTST+DGFG+A +I+ +AS FTLFATHF
Sbjct: 748 FMVEMLETSSILKNATPNSLIIVDELGRGTSTYDGFGLAWAISEHVASKIGCFTLFATHF 807
Query: 675 HEIALLSRVIPTFRNVQVSA--------LE---QEDNLVLLYQVKPGSCVKSYGVHCAKM 723
HE+ L + + +N+ V A LE +++ LL++V+PG +S+G+H A++
Sbjct: 808 HELTSLEKKLDNVKNLHVVAHIGSVSATLEGNNSTEDITLLFKVEPGISDQSFGIHVAEV 867
Query: 724 AGYPEDMLEQARDLMKEYE 742
+PE +++ A+ E E
Sbjct: 868 VQFPEKIVKMAKRKANELE 886
>gi|50290307|ref|XP_447585.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526895|emb|CAG60522.1| unnamed protein product [Candida glabrata]
Length = 957
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 249/725 (34%), Positives = 390/725 (53%), Gaps = 77/725 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+G+ +D K M +I D++ YSNLE+ ++Q +ECL+P N + N KI +
Sbjct: 157 LGLTFIDTSNYKIGMMDIIDNEAYSNLESFLIQLGIRECLVPDLSQNGSTNPELKKITNV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T +EFS +D+ D+ +L+ D + LP+ A +L+NY
Sbjct: 217 IDRCGSVVTIVPNSEFSNKDVEVDLAKLLGNDLT-----LTLPQNVSQLALGACNALLNY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ-------------GSTSAQT 251
L+L++ ++ + ++ + + + S+ + +L++ PQ GS
Sbjct: 272 LQLLSEQEMLGKYELIQHSLESIMKLDSSAIKALNLFPQNNATFFTPMQSGTVGSNGGTK 331
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL +L+ C+T G RLL +W+KQPL D I RH V L++ E R L L
Sbjct: 332 VASLFQLLNNCKTNSGVRLLNEWLKQPLTDFSGIQVRHNLVEFLIDQLELRQILQTEYLP 391
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQNVE 358
G+PD++ L ++ K L+D +VY+ ++P +I+I+ES LV+
Sbjct: 392 GVPDIRRLVKKLN-KNGTLEDVLKVYQFSLKVPDIINIIESFLEDDITTTDIKELVRKTW 450
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-------------------KMKEYLESTARRLNLV 399
L + L+ M + +D K++E L + +N +
Sbjct: 451 CDPLKEFMEPLKKFDEMVQTTVDLDAYEENNEFMIRVEFNEELAKVREQLTAMRDEINAI 510
Query: 400 -----------ADKTIKLENSP-QGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDR 445
+K +KLEN G+ R+T ++ + +Y L TV+ G+ F +
Sbjct: 511 HLEAAEDLGFDPNKKLKLENHHIHGWCMRLTRNDAKALRNHKQYIELSTVKAGIFFSTRK 570
Query: 446 LATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCA 505
+ + +Q++YE Q S+V+E++ I+ YT +LS V+A DVL SF+ AS+ A
Sbjct: 571 MKEIAQETVVLQKDYERLQSSLVKEIVSITLTYTPIFEKLSLVIAHLDVLCSFAHASSYA 630
Query: 506 PKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
P PYVRP M P+ + L RHP++E+Q V++I NDV F ++TGPNMGG
Sbjct: 631 PIPYVRPTMHPLSSDRRTKLMNSRHPVLEVQDDVTFIANDVDMAKDVSEFQIITGPNMGG 690
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR +GV +AQIGCFVPCD+A IS+VD I RVGA DSQ +G+STFM+EM ETA+
Sbjct: 691 KSTYIRQVGVITLMAQIGCFVPCDNAEISIVDAILCRVGAGDSQLKGVSTFMVEMLETAS 750
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
++K T NSL+I+DELGRGTST+DGFG+A +IA +A + F LFATHFHE+ LS +
Sbjct: 751 ILKNATSNSLIIVDELGRGTSTYDGFGLAWAIAEHIAKEIRCFALFATHFHELTNLSEQL 810
Query: 685 PTFRNVQVSALEQE-------DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
P +N+ V A E +++ LLY+V+PG +S+G+H A++ +P+ ++ A+
Sbjct: 811 PNVKNMHVIAHIDESEKALNSNDITLLYKVEPGISDRSFGIHVAEVVQFPKKIVSMAKRK 870
Query: 738 MKEYE 742
E E
Sbjct: 871 ANELE 875
>gi|367013624|ref|XP_003681312.1| hypothetical protein TDEL_0D05170 [Torulaspora delbrueckii]
gi|359748972|emb|CCE92101.1| hypothetical protein TDEL_0D05170 [Torulaspora delbrueckii]
Length = 962
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/733 (34%), Positives = 404/733 (55%), Gaps = 88/733 (12%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP----AEYLNDNKNKIVT 143
+GV+ VD K M +I D++ +SNLE+ ++Q +ECLLP E LN KI +
Sbjct: 156 VIGVSFVDTSDYKIGMLDIIDNEVFSNLESFLIQLGVRECLLPDLSKNENLNSEMKKICS 215
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
+++R T K +FSE+++ D+ +LV D+ L ++ A +L+
Sbjct: 216 VIERCNCVATFIKSQDFSEKNVEIDLTKLVG-DELSLSLSKYS-----NLALGACGALLG 269
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSA-------------- 249
YL+L++++D + ++ + +++ + ++ + +L++ PQ S S
Sbjct: 270 YLQLLSDQDQIGKYEVMQHSLEEFIKLDASAIKALNLFPQNNSQSLTISGPNASFGSLGS 329
Query: 250 --QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
SL +L+ C+T G RLL +W+KQPL D++ I +RH V L++ E R L
Sbjct: 330 NRSKITSLFQLLNNCKTNAGVRLLNEWLKQPLTDVEKITKRHILVEYLIDQLELRQMLQS 389
Query: 308 YALRGLPDMQSLAMRIGRKKAG---LKDCYRVYEGVSQLPKLISILESL-----VQN--- 356
L +PD++ RI +K G L+ ++Y+ ++P++ +LES VQN
Sbjct: 390 DYLPAIPDVR----RITKKLMGSSNLEGVLKIYQFCKKIPEITQLLESFLSDDQVQNEVK 445
Query: 357 --VEASNLNTILSS---LQSLKMM------------------------------DRKDAV 381
++A L+ +L+ L SL+ M D+ D++
Sbjct: 446 NLIKAVWLDPLLAQTGPLASLEEMVETTVDLEVFEQSNEYMIKVEFNEELARIRDQLDSL 505
Query: 382 MDKMKEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGG 438
D++ +A L +K +KLEN G+ R+T + R Y L TV+ G
Sbjct: 506 RDQINAIHMESAEDLGFDPEKKLKLENHHIHGWCMRLTRNDAKELRKRKEYMELSTVKAG 565
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
+ F +L + +Q+EYE Q ++V+E++ I+ Y+ L +LS +LA DVL SF
Sbjct: 566 IYFSTKKLKEIANETATLQKEYEKQQSTLVKEIVSITLTYSPVLERLSLILANLDVLCSF 625
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLV 557
+ AS+ AP PY+RP M + T L RHP++E+Q V++I NDV + +F ++
Sbjct: 626 AHASSYAPIPYIRPIMHGLNTQRKTRLTNSRHPVLEMQDDVAFISNDVLLEDDVANFLII 685
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNMGGKSTYIR +GV +AQIGCFVPC+ A I+VVD I RVGA DSQ +G+STFM+
Sbjct: 686 TGPNMGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAVVDAILCRVGAGDSQLKGVSTFMV 745
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM ETA+++K T+NSL+I+DELGRGTST+DGFG+A +IA +A F LFATHFHE+
Sbjct: 746 EMLETASILKNATKNSLIIVDELGRGTSTYDGFGLAWAIAEFIAGKIGCFALFATHFHEL 805
Query: 678 ALLSRVIPTFRNVQVSA-LEQ-------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
LS + +N+ V A +E+ D++ LLY+V+PG +S+G+H A++ +P+
Sbjct: 806 TALSDKLSNVQNMHVVAHIEKGDSNHNDSDDITLLYKVEPGISDQSFGIHVAEVVQFPQK 865
Query: 730 MLEQARDLMKEYE 742
+++ A+ +E E
Sbjct: 866 IIKMAKRKAEELE 878
>gi|254567329|ref|XP_002490775.1| Protein that forms heterodimers with Msh3p and Msh6p [Komagataella
pastoris GS115]
gi|238030571|emb|CAY68495.1| Protein that forms heterodimers with Msh3p and Msh6p [Komagataella
pastoris GS115]
gi|328351159|emb|CCA37559.1| DNA mismatch repair protein mutS [Komagataella pastoris CBS 7435]
Length = 931
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 254/716 (35%), Positives = 398/716 (55%), Gaps = 70/716 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP---AEYLNDNKNKIVTIL 145
+G++ +D K + E D+D +SN+E+ ++Q KECLL ++ + + K+ ++
Sbjct: 150 IGLSYIDSVNKIIGVVEFVDNDLFSNVESAMIQLGIKECLLAGNTSKAADPDYVKLEQVM 209
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
+R V +T K +++S +++ QD+ RL DD + L A C+ SL+ YL
Sbjct: 210 NRCDVVVTHVKNSDYSTKNIEQDLVRLTG-DDLVFSTNDV---HSLDQALGCVNSLVLYL 265
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS---LLGILDRC 262
L+N++D+ ++++ S+Y+ + + + SL++ P + + + + L G+L+ C
Sbjct: 266 NLLNSDDSGWTLELYNL--SQYLRLDYSAVKSLNLFPSVSNNNQNSMNKNNSLFGLLNHC 323
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
+T G RLL+QW+KQPL D+ AI ER V +LV++ R L E L +PD+ L +
Sbjct: 324 KTVGGSRLLSQWLKQPLLDIKAITERQEIVQLLVDDMTMRAGLQEQFLNSVPDISKLTKK 383
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISIL----------ESLVQNVEASNLNTILSSLQSL 372
+ +KA L D R+Y+ ++LP L+ +L L+ + L I SSL L
Sbjct: 384 LASRKAKLDDVVRIYQLCTKLPDLLGLLIAEDKENTRASELIDEWFINPLQKICSSL--L 441
Query: 373 KMMDRKDAVMD-------------------------------------KMKEYLESTARR 395
K + + +D +M++ E +
Sbjct: 442 KFQELVETTIDLDALENATSISSSMVSVNPQFDENLVRVSKELEEMNSQMQQEHEFASDD 501
Query: 396 LNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQ 452
LN+ K +KLEN G+ +R+T ++ I + RY L TV+ GV F +L+ +
Sbjct: 502 LNMEMVKKLKLENHHVHGWCFRLTRTDSSVIRGNKRYRELQTVKAGVFFTTAKLSELASN 561
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
+ EY Q +V+E+I IS+ Y+ L QLS V+++ DVL SF+ S+ AP PY RP
Sbjct: 562 VAELTEEYSKIQSGVVKEIIEISSTYSPILVQLSAVISKLDVLTSFAHVSSFAPIPYQRP 621
Query: 513 CMKPMGTGS--LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
+ + S L L RHP +E Q +++I NDV E F ++TGPNMGGKSTYIR
Sbjct: 622 KLYGLDDSSRKLKLIGARHPCLETQDDLTFIANDVVLTKDESEFAIITGPNMGGKSTYIR 681
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
+GV +AQIGCF+PCD A I V D I RVGA+DSQ +G+STFM EM E ++++K T
Sbjct: 682 QVGVIALMAQIGCFLPCDEAEICVFDSILARVGASDSQLKGVSTFMSEMLEMSSILKTAT 741
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNV 690
NSLVIIDELGRGTST+DGFG+A I+ +A+ FTLFATHFHE+ LS +IPT N+
Sbjct: 742 SNSLVIIDELGRGTSTYDGFGLAYGISEYIANKLHSFTLFATHFHELTKLSELIPTVINL 801
Query: 691 QVSALE----QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V A ++D++ LLY+VKPG KS+G++ A++ +P+ ++ A+ +E +
Sbjct: 802 HVVAQTSTDGKDDDITLLYKVKPGISDKSFGINVAEIVKFPQKIINMAKRKAQELD 857
>gi|281211524|gb|EFA85686.1| DNA mismatch repair protein [Polysphondylium pallidum PN500]
Length = 850
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/687 (35%), Positives = 387/687 (56%), Gaps = 45/687 (6%)
Query: 63 SNLSCFSHILCVISEDKTLE----TVLTN-TVGVAIVDLDTKKFYMGEIPDDDYYSNLEA 117
N+ F IL V + + TV N +G A D K + + D+++ SNL +
Sbjct: 155 GNMQMFEDILSVKGQSLMVALRVATVRGNRVIGAAFGDATLKSLGVLQFVDNEHLSNLGS 214
Query: 118 IIVQKSPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDD 177
++Q KECL+ + N + K+V L + T +F+ +++ QD+ RL+
Sbjct: 215 FLLQMGVKECLIHIDDKNVDNKKVVEKLQDCDIPFTDVPNADFNVKNIEQDLTRLL---- 270
Query: 178 SELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSS 237
+ N +L E+ A L LI +LEL+ N+ +F + + + Y+ M SA
Sbjct: 271 GSVNN--VLNELEQEYAMQSLSCLIKHLELLCNDRYFGKFKLETFNLDSYMRMDSATFRG 328
Query: 238 LHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVN 297
L+++ ++ S ++C TP G R L+QW+KQPL D + I +R V I N
Sbjct: 329 LNIINEKES-------------NQCNTPMGSRKLSQWIKQPLVDSEEIEKRLDFVEIFTN 375
Query: 298 NTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV 357
+ E R +L L+ + D+ L+ R KA L+DC +Y+ V ++P L+S L++
Sbjct: 376 SLELRQSLRGNDLKKICDLDRLSKRFVGSKANLEDCVNLYDIVQRMPVLVSSLQAYDGQC 435
Query: 358 EASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRI 417
+T + LQS ++ +YL + ++TI L+ + + ++ +
Sbjct: 436 AELISSTFVEPLQS---------IVANFSQYLA--------MVEQTIDLDRANE--SHEL 476
Query: 418 TMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
+ K I + +Y T + GVRF L + + ++Y QQ++V++ + ++
Sbjct: 477 SRKDEKLISNASKYFTHATNKDGVRFSTTDLRRLSDECGKWSKQYAESQQALVDQALQVA 536
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQ 535
+ + ++ LS ++A DV V+ + S+ AP P+VRP + PMGTG V+ RHP VE+Q
Sbjct: 537 SSFVPIIDDLSYLIALLDVYVNLAHISSVAPTPFVRPKIFPMGTGDTVIIGGRHPCVEVQ 596
Query: 536 GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV++IPND+ F+++TGPNMGGKST+IR +GV + LAQIGCFVP + A+ISVV
Sbjct: 597 DGVNFIPNDIELNRERSQFHVITGPNMGGKSTFIRQVGVIILLAQIGCFVPAEEASISVV 656
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D I TR+GA DSQ RG+STFM EM ET+ ++K T+NSL+IIDELGRGTST+DGFG+A
Sbjct: 657 DCILTRIGAGDSQLRGVSTFMAEMLETSYILKTATKNSLIIIDELGRGTSTYDGFGLAWG 716
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
IA + + + LFATHFHE+ +L+ +IP N+ VSA ++ L LLY+++ GSC +S
Sbjct: 717 IAEYICNQIGAYCLFATHFHELTVLAELIPVVNNLHVSANITDNRLTLLYKIENGSCDQS 776
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE 742
+G+H A MAG+PE+++E AR E E
Sbjct: 777 FGIHVAIMAGFPEEVIEIARSKASELE 803
>gi|226506654|ref|NP_001146301.1| DNA mismatch repair protein MSH2 [Zea mays]
gi|11386957|sp|Q9XGC9.1|MSH2_MAIZE RecName: Full=DNA mismatch repair protein MSH2; AltName: Full=MUS1
gi|4775576|emb|CAB42554.1| MUS1 protein [Zea mays]
gi|414887420|tpg|DAA63434.1| TPA: DNA mismatch repair protein MSH2 [Zea mays]
Length = 942
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 277/905 (30%), Positives = 453/905 (50%), Gaps = 122/905 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
F FF PQ + +R F+R ++Y HGE+A I R + + ++ +G + +
Sbjct: 26 FISFFKKLPQDPRA-VRLFDRRDYYTAHGENATFIARTYYHTMSALRQLGSSSDGILSAS 84
Query: 60 VNKSNLSCFSHILCVISEDKTLETV--------LTNT----------------------- 88
V+K+ + + + D TLE LT +
Sbjct: 85 VSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGTPGNIGSFEDILFANNDMEDSP 144
Query: 89 ---------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
VG++ +D+ +K + E P+D ++N+E+ +V KECLLPA+
Sbjct: 145 VIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDSRFTNVESALVALGCKECLLPADC 204
Query: 134 LND-NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+ N + ++ V +T +KK +F DL QD+ R++R +++ LL +
Sbjct: 205 EKSIDLNPLQDVISNCNVLLTEKKKADFKSRDLAQDLGRIIRGSVEPVRD--LLSQ--FD 260
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A L +L++Y EL+ ++ N ++I + + Y+ + SA + +L++ +G T
Sbjct: 261 YALGPLGALLSYAELLADDTNYGNYTIEKYNLNCYMRLDSAAVRALNI--AEGKTDVNKN 318
Query: 253 DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+++R C G RLL +W+KQPL D++ I R V V + E R L + L+
Sbjct: 319 FSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPELRQGLRQ-QLK 377
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP--------------------------- 344
+ D+ L + +K A L+ ++Y+ S++P
Sbjct: 378 RISDIDRLTHSLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQFSTLIRSKFLEPLEE 437
Query: 345 --------KLISILESLVQNVEASNLNTILSSLQSLKMMDRKD---AVMDKMKEYLESTA 393
+ S++E+ + + N +S L S + KD V + + TA
Sbjct: 438 WMAKNRFGRFSSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELSVVENHINNLHVDTA 497
Query: 394 RRLNLVADKTIKLENSPQGFAYRIT----MKLNNSIDDRYTILDTVRGGVRFQDDRLATA 449
L+L DK +KLE G +R++ K+ + Y I++T + GV+F + +L
Sbjct: 498 SDLDLSVDKQLKLEKGSLGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGVKFTNSKLKNL 557
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
+ QYQA+ EY + Q+ +V +V+ +S +++ + VL++ DVL SF+ +T P PY
Sbjct: 558 SDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVLQSFADLATSCPVPY 617
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
VRP + G +VL RHP +E Q GV++IPND G+ F ++TGPNMGGKST+I
Sbjct: 618 VRPDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFI 677
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R +GV+V +AQ+G FVPCD A+ISV D IF RVGA D Q G+STFM EM ETA+++K
Sbjct: 678 RQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVSTFMQEMLETASILKGA 737
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR------- 682
++ SL+IIDELGRGTST+DGFG+A +I L + TLFATHFHE+ L+
Sbjct: 738 SDKSLIIIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFHELTALAHRNDDEHQ 797
Query: 683 ------VIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
V + L ++ L +LY+V+PG+C +S+G+H A+ A +PE ++ A+
Sbjct: 798 HISDIGVANYHVGAHIDPLSRK--LTMLYKVEPGACDQSFGIHVAEFANFPEAVVALAKS 855
Query: 737 LMKEYEYSLDTKTPSG---DETNNREEEYFKT--VQEGEYQMFDFLQQCLSLS-KQKDTN 790
E E T T S DE ++ + F + G + FL++ +L + D +
Sbjct: 856 KAAELEDFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFLEEFAALPMDEMDGS 915
Query: 791 RILHL 795
+IL +
Sbjct: 916 KILEM 920
>gi|190346184|gb|EDK38208.2| hypothetical protein PGUG_02306 [Meyerozyma guilliermondii ATCC
6260]
Length = 921
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/705 (34%), Positives = 398/705 (56%), Gaps = 65/705 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY----LNDNKNKIVTI 144
+GV +VDL + E D+D +SNLE +++Q KE ++P+ Y + K+ +
Sbjct: 149 IGVGLVDLSNSSIQLCEFEDNDLFSNLETLLLQLGVKEIIVPSNYDPHEETGDAVKLFQV 208
Query: 145 LDR-NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNA-RLLPEMCLTTATHCLRSLI 202
LDR + +T K + F++E + D+ R+V ++ EL A + + + + C +L+
Sbjct: 209 LDRIGNIVVTSVKSSLFNKE-VEHDLARIVEGENIELVLASKGINAIDFPLSLACCSALL 267
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
+YLEL + E FSI + S Y+ + ++ +L++ P + + S+ +L++C
Sbjct: 268 HYLELSSGE-----FSIDKYNLSDYMKLDTSTTKALNIFPASNNYTKPNVSSIFDLLNKC 322
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
++ G RLL+QW+KQPL + I +RH V +LVN+T R+ L + L +PD++ L +
Sbjct: 323 KSSAGSRLLSQWLKQPLTSVSDITDRHELVELLVNDTSLRVFLTQDWLPRVPDVKRLLKK 382
Query: 323 IG---RKKAG-----LKDCYRVYEGVSQLPKLISIL------------------ESLVQN 356
I +K +G L D R+Y+ V +P+L+S+L +SL++
Sbjct: 383 IANGVKKSSGNENKKLDDVVRLYQLVIVVPELLSMLNDNPLILKYWTEPIQKAHKSLIKF 442
Query: 357 VEASNLNTILSSLQS------------------LKMMDRKDAVMDKMKEYLESTARRLNL 398
E LS L S +K+ ++ +A + +K+ + LNL
Sbjct: 443 QELVETTIDLSPLDSSDLLHNDFNIKPEFDESLVKINNQLEATLSDIKQCQVDASDDLNL 502
Query: 399 VADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQA 455
DK +KLE + G+ +R+T +N + + +Y TV+ G F L T QYQ
Sbjct: 503 EVDKKLKLEKHQNHGWCFRVTRNDSNVLRNNSKYQQFQTVKAGTYFSTKELRTLALQYQK 562
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
EY + Q+ ++ E++ IS Y+ + LA DV+VSF+ +S AP PYVRP +
Sbjct: 563 YSDEYNSKQRELIREILSISLTYSSVFMPFALTLAHIDVIVSFANSSVFAPTPYVRPIIH 622
Query: 516 PMG---TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSI 572
+ + +L L RHP++E+Q +++I NDV G+ F+++TGPNMGGKSTYIR +
Sbjct: 623 GLNDKESRTLKLKDARHPVLEVQDDINFIANDVAMSPGK-QFSIITGPNMGGKSTYIRQV 681
Query: 573 GVSVFLAQIGCFVPC-DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
GV + QIGCFVP + A + V D I +RVGA DSQ +G+STFM+EM ET++++ +
Sbjct: 682 GVIALMNQIGCFVPAREGAELPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATASA 741
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
NSL+IIDELGRGTST+DGFG+A +I+ + ++ FTLFATHFHE+ L+ P+ +N+
Sbjct: 742 NSLIIIDELGRGTSTYDGFGLAWAISEHIIKEKECFTLFATHFHELTQLADKYPSVQNLH 801
Query: 692 VSA-LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
V A +EQ D++ L+Y+V+PG KS+G+H A++ +P ++ A+
Sbjct: 802 VVAHVEQADDITLMYRVEPGVSDKSFGIHVAELVKFPAKIVNMAK 846
>gi|403217955|emb|CCK72447.1| hypothetical protein KNAG_0K00810 [Kazachstania naganishii CBS
8797]
Length = 974
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 269/783 (34%), Positives = 418/783 (53%), Gaps = 98/783 (12%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP----AEYLNDNKNKIVTI 144
+GVA VD K M +I D++ +SNLE+ ++Q KECL+P AE N KIV +
Sbjct: 160 IGVAFVDTSDYKLGMLDILDNEVFSNLESFLIQLGVKECLVPDLSHAEN-NQEWTKIVNV 218
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDV-NRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
+DR T + ++F++ + +DV N L++ + +L + LP+ A +L++
Sbjct: 219 IDRCGTAATLIRSSQFNKGN--EDVENDLIKLTNDKLIMS--LPQKFSPLALGACHALLD 274
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS----TSAQTYD------ 253
YL L++N D + +F + +++ + ++ + +L++ PQ S TS QT +
Sbjct: 275 YLNLLSNSDVLGKFELVQHSLKEFIKLDASSIKALNLYPQGPSNPTMTSTQTSNFSYGFN 334
Query: 254 ------SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
SL +L+ C+T G RLL +W+KQPL D+ I RH V L++ E R L
Sbjct: 335 SKGKVTSLFQLLNHCKTNAGIRLLNEWIKQPLTDMTKINTRHNLVEYLIDQLELRQLLQC 394
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES--------------- 352
L PD++ L R+ K L+D +VY+ ++P+L+ +LES
Sbjct: 395 DYLPLFPDLRRLTKRL-IKNGTLEDVLKVYQFTKRVPELVQLLESFTNPDEENLADSENE 453
Query: 353 -----LVQNVEASNLNTILSSLQSLKMM------------------------------DR 377
LVQ+ L L L L+ M D+
Sbjct: 454 SSLEKLVQDTWIVPLQDRLDPLSKLEEMVETTIDLDAYEENNDFMIKVEFNQELGSIRDQ 513
Query: 378 KDAVMDKMKEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR----YTIL 432
D + +K+K+ A L +K +KLEN G+ R+T N++ + R Y L
Sbjct: 514 LDNLREKIKQIHLEAAEDLGFDPEKKLKLENHHMHGWCMRLTR--NDAKELRKHREYIEL 571
Query: 433 DTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQF 492
T++ G+ F +L ++ +++EYE Q +V+E++ I+ Y+ L ++S VLA
Sbjct: 572 STIKAGIFFSTKKLKEVASKTAELEKEYEKQQSILVKEIVSITLTYSPVLEKISLVLAHL 631
Query: 493 DVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGE 551
DVL SF+ S+ AP PYVRP M G+ L RHP++E+Q + +I NDV +
Sbjct: 632 DVLTSFAHVSSYAPIPYVRPTMHDFGSKRKTHLVASRHPVLEMQDDIVFIANDVDLEKDS 691
Query: 552 VSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRG 611
F ++TGPNMGGKSTYIR +GV +AQIGCFVPC+ A I+VVD I RVGA DSQ +G
Sbjct: 692 KEFLIITGPNMGGKSTYIRQVGVITLMAQIGCFVPCEEAEIAVVDAILCRVGAGDSQLKG 751
Query: 612 ISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFA 671
+STFM+EM ETA+++K TENSL+I+DELGRGTST+DGFG+A +IA +A + FTLFA
Sbjct: 752 VSTFMVEMLETASILKNATENSLIIVDELGRGTSTYDGFGLAWAIAEHIAKKIKCFTLFA 811
Query: 672 THFHEIALLSRVIPTFRNVQVSA-LEQ-------EDNLVLLYQVKPGSCVKSYGVHCAKM 723
THFHE+ L+ + N+ V A +EQ D++ LLY+V+ G +S+G+H A++
Sbjct: 812 THFHELTSLADKLSNVVNMHVVAHIEQSEKSQHDSDDITLLYKVELGISDQSFGIHVAEV 871
Query: 724 AGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSL 783
+P+ +++ A+ E E D K +E+ + + + EG Q+ LQ +
Sbjct: 872 VQFPQKIVKMAKRKAAELE---DLK--QSNESLKKNKLSVSEINEGNQQLKKLLQSWVQS 926
Query: 784 SKQ 786
K+
Sbjct: 927 VKE 929
>gi|66819479|ref|XP_643399.1| hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4]
gi|74897320|sp|Q553L4.1|MSH2_DICDI RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|60471699|gb|EAL69655.1| hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4]
Length = 937
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 255/737 (34%), Positives = 399/737 (54%), Gaps = 71/737 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ D K + + D+D SNL + I+Q S KECLL + N + K+ L
Sbjct: 186 GISFGDATFKTIGVSQFMDNDNLSNLSSFIMQMSVKECLLCCDQKNYDYQKVKEKLSDAG 245
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ T K++FS ++ QD+ RL+ +KN LP++ A LI +L+L++
Sbjct: 246 IPFTELPKSDFSSKNAEQDLTRLL----GSVKNN--LPDIEQEHAIQSASCLIKHLDLLS 299
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY---------------DS 254
N + +F + D +Y+ + S+ LH++ + S+ + S
Sbjct: 300 NPNYFGKFKLEKYDLDRYMKLDSSSFKGLHIIDLKDSSVSAAAGGGGAGGASSSSNKDQS 359
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
L +L++C TP G RLL QW+KQPL + + I R V N+ E R +L L+ +
Sbjct: 360 LYNLLNQCNTPMGSRLLLQWVKQPLLNAEEIEARLNFVEAFYNDLELRQSLRSNDLKKIG 419
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI-------SILESLVQNVEASNLNTILS 367
D+ L+ ++ +KA L+DC +Y V++LP ++ SI + L++ +L +I+S
Sbjct: 420 DLDRLSKKLHGQKATLEDCVNLYGIVTRLPVVLQSLNNHSSIHQELIKVNFIESLESIIS 479
Query: 368 SLQSL-----KMMD-------------------------RKDAVMDKMKEYLESTARRLN 397
K +D +KD + +K++ + A LN
Sbjct: 480 DFAKFCAMVEKTIDLDLANDKHEYVIRSSFDETLRGIQLKKDQISNKIERFRVDIADDLN 539
Query: 398 LVADKTIKLENSPQG-FAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQYQ 454
L K +KL S + F RI+ K +I D +Y + T + GVRF + T N Y+
Sbjct: 540 LDEAK-VKLHYSEKDMFLLRISRKDEVAIRDKKKYIVHATAKDGVRFATREIDTLNEAYK 598
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
EY Q + + + I+A + + LS ++A DV V+ S S+ AP P++RP +
Sbjct: 599 KWSAEYLDKQDGLAKRTLQIAASFVPLIEDLSSLIATLDVFVTLSHVSSIAPIPFIRPEI 658
Query: 515 KPMGT-----GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
P+G+ G++++ RHP VE+Q V++I ND+ G+ F ++TGPNMGGKST+I
Sbjct: 659 IPLGSDENGAGTVIIG-GRHPCVEIQDNVNFIANDIDLTRGQSQFQIITGPNMGGKSTFI 717
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R +G+ V +AQIGCFVP ATI+VVD I +RVGA DSQ RG+STFM EM ET+ ++K
Sbjct: 718 RQVGLIVLMAQIGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVA 777
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T+NSL+IIDELGRGTST+DGFG+A IA + + F LFATHFHE+ +LS ++P +N
Sbjct: 778 TKNSLIIIDELGRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILSDLLPMVKN 837
Query: 690 VQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT 749
+ VSA Q + LLY+V+ G C +S+G+H A +A +P ++E A+ KE E S ++ T
Sbjct: 838 LHVSASTQNNTFTLLYKVEQGPCDQSFGIHVAILANFPSQVIENAKQKAKELE-SFESNT 896
Query: 750 PSGDETNNREEEYFKTV 766
+ +N+ E FK +
Sbjct: 897 LK--QNHNKFLEEFKEI 911
>gi|359491419|ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
Length = 902
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 265/762 (34%), Positives = 411/762 (53%), Gaps = 69/762 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIV-TILD 146
TVG+ VDL + + E DD ++N+E+ +V +ECLLP+E ++ + + L
Sbjct: 117 TVGLGFVDLTRRVLGLAEFLDDSQFTNVESALVALGCRECLLPSESAKSSETRTLHDALS 176
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R V +T RK+ EF DL+QD+ RLV+ ++ R L A L L++Y E
Sbjct: 177 RCGVMLTERKRTEFKARDLVQDLGRLVK---GSIEPVRDLVS-GFELAPGALGLLLSYAE 232
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR-CRTP 265
L+ +E N F+I + Y+ + SA + +L+VL + T A SL G+++R C
Sbjct: 233 LLADESNYGNFTIQRYNLDSYMRLDSAAVRALNVL--ESKTDANKNFSLFGLMNRTCTAG 290
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL W+KQPL D++ I R V V +T R +L ++ L+ + D++ L + +
Sbjct: 291 MGKRLLHMWLKQPLVDVNEINCRQDLVQAFVEDTALRQDLRQH-LKRISDIERLLRTLEK 349
Query: 326 KKAGLKDCYRVYEGVSQLPKLISIL-------ESLVQN---------VEASNLNTI---- 365
++A L+ ++Y+ +LP + S L SL++ + +LN
Sbjct: 350 RRASLQHVVKLYQSSIRLPYIKSALGQYDGQFSSLIKEKYLDPLESWTDDDHLNRFIGLV 409
Query: 366 -----LSSLQSLKMM-----DRKDAVMDKMKEYLE--------STARRLNLVADKTIKLE 407
L+ L++ + M D K A + +E LE TA L+L DK++KLE
Sbjct: 410 EAAVDLNELENGEYMISSGYDAKLASLKNDQETLELQIHNLHKQTAIDLDLPMDKSLKLE 469
Query: 408 NSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
Q G +RIT K + + ++ +L+T + GV+F + +L QYQ I EY+
Sbjct: 470 KGTQFGHVFRITKKEEPKIRKKLTAKFIVLETRKDGVKFTNTKLKKLGDQYQKILDEYKD 529
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
Q+ +V V+ +A +++ L+ +L++ DVL+SF+ +T +P Y RP + P G +
Sbjct: 530 CQRELVVRVVQTAATFSEVFENLARLLSELDVLLSFADLATSSPTAYTRPEISPSHMGDI 589
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
+L RHP VE Q V++IPND + F ++TGPNMGGKST+IR +GV++ +AQ+G
Sbjct: 590 ILEGSRHPCVEAQDWVNFIPNDCKLVREKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 649
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVPCD A ISV D IF RVGA D Q RG+STFM EM ETA+++K T+ SL+IIDELGR
Sbjct: 650 SFVPCDKANISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGR 709
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS----------RVIPTFRNVQV 692
GTST+DGFG+A +I + + TLFATHFHE+ L+ + I N V
Sbjct: 710 GTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHV 769
Query: 693 SAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
SA L +LY+V+PG+C +S+G+H A+ A +PE ++ AR+ E E T+
Sbjct: 770 SAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFSPTEIV 829
Query: 751 SGDETNN-----REEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
S D ++ + E + G + FL++ L +K
Sbjct: 830 SNDASDKVGSKRKRESSPDDISRGAARAHQFLKEFSDLPLEK 871
>gi|303274132|ref|XP_003056389.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462473|gb|EEH59765.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 978
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 264/854 (30%), Positives = 433/854 (50%), Gaps = 121/854 (14%)
Query: 13 KTTIRFFNRVEFYCVHGEDAELIQRK-SNVVYLVKTMGQKDKTLETVLVNKSNLSCFSHI 71
K +R F EF+ VHGEDA + R N +V+ +G + L V N+S
Sbjct: 37 KNVLRIFKVKEFFSVHGEDANFVARNFYNTTTVVRYIGHGESALPGVTFNRSMFETVIRT 96
Query: 72 -------------------------------LCVISEDKTLETVLTNT------------ 88
LC E+ + L +T
Sbjct: 97 VLLDVNDRSVELYEDSPRQGWKLVRTASPGRLCAFEEELYCASELVDTPVVTAVRIAIRH 156
Query: 89 ----VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVT- 143
VGVA +L T++ E DD+++ LEA+I Q KECL+P E + + K++
Sbjct: 157 DQRLVGVAYANLTTRELGACEFVDDEHFCTLEAVICQLGTKECLMPRESMATPEGKVLRH 216
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFD-----------DSELKNARLLPEMCLT 192
I++R TGR+ ++F +L D+ RL+ + +E++ R L E
Sbjct: 217 IVERCGALATGRRTSDFDSRNLESDLERLLVAERTPMSAGTAAATAEVELHRSLLEKEGA 276
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
AT L +++ + EL + N + ++ + D +Y+ + S+ + +L+VLP++ S S+
Sbjct: 277 AAT--LAAVLRFSELATDPINHGRCTLVTHDTGRYMRLDSSALRALNVLPEKASISSAAP 334
Query: 253 D---------SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
S+ G+L+RC + G RLL +W+KQPL D + I RH V LV++ EAR
Sbjct: 335 SAAAETAGSFSIYGLLNRCCSAMGRRLLLRWLKQPLVDAEEISGRHDVVEALVDDPEARD 394
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------- 350
L LR LPDM+ L ++ R++A L D R+Y+ + +P + +
Sbjct: 395 TLRRVHLRSLPDMERLTRKLERRRATLLDLCRLYQASTAIPHIAEVCVRMKDRYGLMMSS 454
Query: 351 ---ESLVQNVEASNLNTILSSLQSLKMMDR---------------------KDAVMDKMK 386
+L++ + +L + L++ +DR KDA ++
Sbjct: 455 RYSSALLKLHDEEHLGRFEALLEAAVDLDRIPDEYVVSPSYDEELGKLKKLKDAASQEIH 514
Query: 387 EYLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSIDDR----YTILDTVRGGVRF 441
+ ES+A L DK +KLE N+ G+ R+T K ++ + Y +L+ + G +F
Sbjct: 515 KVFESSAEDLCTPVDKVLKLEHNNMHGWYLRLTKKDEVTVRKKLLANYQVLEAKKDGTKF 574
Query: 442 QDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIA 501
+ +L + + + R Y + Q+ +VE ++ +++ + +S + A+ DVL SF+
Sbjct: 575 TNKQLRALSCKRTDLDRMYASQQRQLVERIVDVASSFADVFLHVSAICAEVDVLTSFAEV 634
Query: 502 STCAPKPYVRPCMKP------MGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFN 555
+ AP+P+VRP M T + L RHP +E Q G +I N + G F
Sbjct: 635 AISAPEPFVRPTMTAKKNIFEADTREIYLGGSRHPCIEAQEGSQFIANTCKLEQGNSWFQ 694
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
++TGPNMGGKST+IR +GV + +AQ+G FVPC+ A I++ D IF RVGA D Q RGISTF
Sbjct: 695 IITGPNMGGKSTFIRQVGVCIIMAQVGSFVPCNMAKIAIRDAIFARVGAGDCQLRGISTF 754
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M EM ET+ ++K T +SL+IIDELGRGTST+DGFG+A +I++ ++++ + LFATHFH
Sbjct: 755 MAEMLETSAILKSATSSSLIIIDELGRGTSTYDGFGLAWAISQHISNNIKAPCLFATHFH 814
Query: 676 EI-ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
E+ A+ S + +V + L +LY++ PG+C +S+G+ CA+ A +P D+L A
Sbjct: 815 ELTAIQSPEGVSNLHVDAKISMESRKLTMLYRLLPGACDQSFGIQCAEFARFPADVLRIA 874
Query: 735 RDLMKEYE-YSLDT 747
++ E + +S++T
Sbjct: 875 QEKATELDNFSVNT 888
>gi|45199121|ref|NP_986150.1| AFR603Cp [Ashbya gossypii ATCC 10895]
gi|44985261|gb|AAS53974.1| AFR603Cp [Ashbya gossypii ATCC 10895]
gi|374109382|gb|AEY98288.1| FAFR603Cp [Ashbya gossypii FDAG1]
Length = 956
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 265/790 (33%), Positives = 422/790 (53%), Gaps = 80/790 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP----AEYLNDNKNKIVT 143
+GV+ VD ++ K M +I D++ YSN E+ ++Q KECLLP E + K+
Sbjct: 156 VLGVSYVDSNSYKIGMLDIVDNEVYSNFESFLIQLGVKECLLPDLRNNESFSAELKKVTG 215
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
+++R +T K +EF+ +D+ D+ +L EL A LP C +LI
Sbjct: 216 VIERCGCVVTFVKNSEFNNKDVEADLAKLC---GDEL--ATSLPRFSKLALASC-NALIG 269
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQ-----------TY 252
Y +L+NN N + I S+++ + ++ + +L + PQ ST +
Sbjct: 270 YQQLLNNAGNEGSYQIVEYSLSEFMKLDASAVKALSIFPQGPSTQSGMATSGKFGGNGKI 329
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
SLL +L++C+T G RLL +W+KQPL D +I +RH V+ LV+ E R L + L
Sbjct: 330 TSLLQLLNKCKTNAGVRLLNEWLKQPLSDKGSIEKRHNLVDYLVDQLELRSILRDDYLPL 389
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-------------SLVQNVEA 359
+PD++ L ++ R L+D +VY+ ++P++ +L+ LV
Sbjct: 390 VPDVRRLTKKLNRN-GSLEDVLKVYQFAQRIPEINGVLKENLDALSEGSHVKDLVLETWY 448
Query: 360 SNLNTILSSLQSLKMM----------DRKDAVM--------------------DKMKEYL 389
+ LN + L + M + + M DK++
Sbjct: 449 NPLNEHVEPLHKFQEMVETTVDLEAYEETNEFMIKVEFNDELARIRTELVDLKDKIRTIH 508
Query: 390 ESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
T+ L +K +KLEN G+ R+T ++ +Y L TV+ G+ F L
Sbjct: 509 LDTSDDLGFDPEKKLKLENHHVHGWCMRLTRNDAKALRQHKKYLELSTVKAGIYFSTKEL 568
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ + +Q++Y+ Q ++V+E++ I+ Y+ L +LS VLA DVL SF+ S+ AP
Sbjct: 569 KLLSDEIGTLQQDYDRKQSALVKEIVTITLSYSPVLEKLSLVLANLDVLCSFAHVSSYAP 628
Query: 507 KPYVRPCMKPMGTG--SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
PYVRP M M G + L RHP+VE Q V++I NDV ++ F ++TGPNMGG
Sbjct: 629 IPYVRPVMYDMHAGQRKMELLASRHPLVEAQDEVTFISNDVVLEADSSGFAIITGPNMGG 688
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR +GV LAQIGCFVPCD+A I++VD I RVGA DSQ +G+STFM EM ETA+
Sbjct: 689 KSTYIRQVGVICLLAQIGCFVPCDAAEITIVDAILCRVGAGDSQLKGVSTFMAEMLETAS 748
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
+++ T+NSL+IIDELGRGTST+DGFG+A SI+ +A + F LFATHFHE+ L+
Sbjct: 749 ILRNATKNSLIIIDELGRGTSTYDGFGLAWSISEHIAKNIGCFALFATHFHELTALADDC 808
Query: 685 PTFRNVQVSALEQE-----DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMK 739
P N+ V A +E D++ LLY+V+PG +S+G+H A++ +P +++ A+
Sbjct: 809 PNVTNLHVVAHVEEKSHKSDDITLLYKVEPGISDQSFGIHVAEVVQFPSKIVKMAKRKAT 868
Query: 740 EYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKDTNRILHLQETQ 799
E + D K + E + + + + +G + + LQ+ S+ + ++ ++ L + Q
Sbjct: 869 ELD---DIKEET--ECLKKLKCSPEHIAKGSEVLKNLLQEWASILRAENLDQQLDDESIQ 923
Query: 800 EPGIEEYQSF 809
E I++ +S
Sbjct: 924 ELCIDKLRSL 933
>gi|302801095|ref|XP_002982304.1| hypothetical protein SELMODRAFT_268576 [Selaginella moellendorffii]
gi|300149896|gb|EFJ16549.1| hypothetical protein SELMODRAFT_268576 [Selaginella moellendorffii]
Length = 936
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 272/864 (31%), Positives = 432/864 (50%), Gaps = 147/864 (17%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQR-KSNVVYLVKTMGQKDKTLETVL 59
F FF P+ + IRFF+R +++ HG++A LI R ++ +G TL +V
Sbjct: 20 FIKFFRKLPE-DPSVIRFFDRRDYFTAHGDNASLIARLYYRTTTALRQVGSGSDTLSSVS 78
Query: 60 VNKS-------------------------------------NLSCFSHILC--------- 73
++KS L F +L
Sbjct: 79 ISKSMFEVITRDVLLEKTEYNVELYEGSGGNWKLAKSATPGKLGSFEDVLFSSIDMHDTP 138
Query: 74 VISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
V+ T+ VG+A D+ + E DDD Y+NLE+ ++ +EC+LPAE
Sbjct: 139 VVMAVWTVARDQEQLVGIAFTDMTRRTLGTLEFLDDDQYTNLESALLALGCRECVLPAEN 198
Query: 134 LND-NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+ ++ +L R V +T +KK EF D+ QD++RL++ +
Sbjct: 199 AKSVDGRRLRDVLARCNVRLTEKKKAEFKSRDIEQDLSRLIK-----------------S 241
Query: 193 TATHCLRSLI--------------NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSL 238
T+ LR L+ Y ++ ++ N ++ + +Y+ + +A + +L
Sbjct: 242 TSVEELRELVVKYEVASAALAALLAYTDIFADDSNHGKYRLQQYSLDRYMRLDAAALRAL 301
Query: 239 HVLPQQGSTSAQTYDSLLGILDRCRTP-QGHRLLAQWMKQPLKDLDAIVERHAAVNILVN 297
HVL + + + +L G+++R T G RLL +W+KQPL D+D I RH V + V
Sbjct: 302 HVLESKNDPNKNS--TLFGLMNRTSTAGMGKRLLNRWLKQPLLDVDEIKHRHDVVQMFVE 359
Query: 298 NTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY----------------EG-- 339
+ E R +L L+ +PD++ L ++ R +A L+D ++Y EG
Sbjct: 360 DAELRESLKN-CLKRVPDVERLTRKLERSRATLQDLVKLYQVSVRLSVVKDALERYEGEF 418
Query: 340 -----------------VSQLPKLISILESLVQNVEASNLNTILS-----SLQSLKMMDR 377
L + +++ES + + N I+S SL+++K DR
Sbjct: 419 ASAIEERYVVPLREWTLAEHLGRYDALIESAIDLDQIKNGEYIISASYDSSLKTIKA-DR 477
Query: 378 KDAVMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTIL 432
DAV ++++E E A L+L ADK++KL+ + Q G +RIT K + + +Y L
Sbjct: 478 -DAVEEEIREAHEQAANDLDLPADKSLKLDKTTQWGHVFRITKKEEPKVRKKLAVQYITL 536
Query: 433 DTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQF 492
+T + G++F +L + +Y + Y Q+ +V+ ++ +S Y + N +++LA+
Sbjct: 537 ETRKDGIKFTTSKLRRLSERYGNLTENYTNTQRDLVKRLVQVSQSYVEIFNGAANLLAEL 596
Query: 493 DVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEV 552
DVL+SF+ + +P PYVRP + G ++L RHP VE Q V++IPND G+
Sbjct: 597 DVLLSFADLAVSSPTPYVRPIITGQNEGDIILEGSRHPCVEAQDDVNFIPNDCRLIRGKS 656
Query: 553 SFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGI 612
F ++TGPNMGGKSTYIR IGV++ +AQ+GCFVPC A IS+ IF RVGA D Q RG+
Sbjct: 657 WFQIITGPNMGGKSTYIRQIGVNILMAQVGCFVPCYRAEISIRSCIFARVGAGDCQLRGV 716
Query: 613 STFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFAT 672
STFM EM ET+ ++K TE SL+I+DELGRGTST+DGFG+A +I + + TLFAT
Sbjct: 717 STFMAEMLETSAILKSATETSLIIVDELGRGTSTYDGFGLAWAICEYIVDVTRAPTLFAT 776
Query: 673 HFHEIALLS-RVIPT-----------FRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGV 718
HFHE+ +S R P+ N VSA L +LY+V+ G C +S+G+
Sbjct: 777 HFHELTSISHRQGPSAHGPSKGPPVGISNFHVSAHIDPSSRKLTMLYKVEDGPCDQSFGI 836
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H A+ A +PE ++ A+ E E
Sbjct: 837 HVAEFARFPECVVALAKQKAAELE 860
>gi|440794810|gb|ELR15959.1| DNA mismatch repair protein msh2, putative [Acanthamoeba
castellanii str. Neff]
Length = 935
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 276/850 (32%), Positives = 429/850 (50%), Gaps = 110/850 (12%)
Query: 2 KFYLFFFPQKSKTTIRFFNRVEFYCVHGEDAELIQRK-----SNVVY----LVKTMGQKD 52
+FY FP K +RFF + E + VHGE A+ + ++ + V + + T+ K
Sbjct: 25 RFYNQTFP-KEDGVVRFFGQKEIFSVHGEAAKFVAQEYFRTLAAVTFSGSQQLPTVEMKQ 83
Query: 53 KTLETVL--------------------------VNKSNLSCFSHILCVISEDKTLETVLT 86
+ E V+ + N+ F +L +K LE
Sbjct: 84 EKYEDVVRDLILVKLKKVEVWGKTGTNWAKEKKASPGNVRDFEELL---YRNKELEDTAV 140
Query: 87 NT------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
+ VG A D +K + D + +NLE++++Q +EC+L
Sbjct: 141 SVAICFGVEGQHKMVGAAFADAILRKIGYCQFVDTIHLANLESLLLQIGARECILAPGGT 200
Query: 135 NDN--KNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFD-DSELKNARLLPEMCL 191
D K+ +L+R + T KK F +D+ QD++RLVR D + L A L C
Sbjct: 201 RDEIEMKKLDGLLERCGIMKTEVKKAHFKAQDIEQDLSRLVREDMANNLHQA--LEHSC- 257
Query: 192 TTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT 251
A L ++I ++EL+++EDN + + ++D SKY+ + +L++ P T
Sbjct: 258 --AMSSLAAIIKHMELLSDEDNFRSYQLKTLDLSKYMRIDQPASRALNLFPSPTDTDKSF 315
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+L++CRT G R L QW+KQPL ++D I R V I V + E R ++ E+ R
Sbjct: 316 --SLYGLLNKCRTAMGSRRLLQWIKQPLLNIDDIEVRQNIVEIFVEDAELRQSMQEH-FR 372
Query: 312 GLPDMQSLAMRIGRKK--AGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNL 362
+ D+ L + R + A LKDC +Y+ +LP + + L + L+ L
Sbjct: 373 RITDIDRLIKKFQRTRITASLKDCVVLYDIYRRLPSMHATLSAYSTKNAGLLHEQYTDEL 432
Query: 363 NTIL---SSLQSL--------------------------KMMDRKDAVMDKMKEYLESTA 393
++ S Q L + K+ V K+ +
Sbjct: 433 ARVIDEFSDFQRLIEGCIDLDAAQNNEYQINARFDPEFTQWCKEKEQVKQKIDTIFRAVQ 492
Query: 394 RRLNLVADK----TIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATA 449
R L ADK +++LENS + + K ++ ++ + R +D A
Sbjct: 493 RELG--ADKRDKDSVELENSKVHEWHIVVPKKASTT----KLIKSKRDWSVLEDTTKAMR 546
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
+ ++ ++ + Q+ +V E+I A Y + LS +LA DV VS + + AP Y
Sbjct: 547 SRRWTELEECIQAKQKELVLEIIKCVASYVPLVEDLSILLADLDVFVSLAHVAVNAPAGY 606
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
VRP + P GTG ++L Q RHP +ELQ GV +I NDV K + SF ++TGPNMGGKSTYI
Sbjct: 607 VRPRLTPSGTGDVILKQARHPCLELQDGVGFIANDVIMKRDDSSFQIITGPNMGGKSTYI 666
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
RS GV V +AQIG FVPC +A +SVVD I R+GA+DSQ RG+STFM EM+ET++++K
Sbjct: 667 RSAGVIVLMAQIGSFVPCSTAVVSVVDCIMCRLGASDSQLRGVSTFMAEMQETSSILKAA 726
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T+ SL+IIDELGRGTST+DGFG+A +I+ + + F FATHFHE+ L + IP +N
Sbjct: 727 TQRSLIIIDELGRGTSTYDGFGLAWAISEHIINKIGCFCFFATHFHELTALEQHIPKVKN 786
Query: 690 VQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT 749
+ V+A ++ LVLLY +K G KS+G+H A++AG+P ++E A+ ++ E + +K
Sbjct: 787 LHVTAQTADNKLVLLYNIKQGPSDKSFGIHIAELAGFPPSVIEVAQQKVETLEKTAQSKG 846
Query: 750 PSGDETNNRE 759
+ RE
Sbjct: 847 VTSGVGQKRE 856
>gi|156841571|ref|XP_001644158.1| hypothetical protein Kpol_1053p38 [Vanderwaltozyma polyspora DSM
70294]
gi|156114794|gb|EDO16300.1| hypothetical protein Kpol_1053p38 [Vanderwaltozyma polyspora DSM
70294]
Length = 959
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 247/726 (34%), Positives = 398/726 (54%), Gaps = 78/726 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP----AEYLNDNKNKIVTI 144
+GV +D K M +I D++ YSNLE+ ++Q +ECLLP +E + KI +
Sbjct: 157 LGVTFIDTSNYKIGMLDIVDNEVYSNLESFLIQLGVRECLLPDLTKSEGNMNEIKKITGV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR T + ++FS++D D+ +L+ EL + LP+ A +L++Y
Sbjct: 217 IDRCGCVATFVRNSDFSDKDSESDLAKLI---GDELSIS--LPQKFSKFALSSFNALVHY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS-------------AQT 251
LEL+ +D + ++ + + + + ++ M +L++ P S S +
Sbjct: 272 LELLQEQDQLGKYELIQHSLKELMKLDASAMKALNLFPATSSQSIVPLLTAGYSNSNSSK 331
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL +L+ C+T G RLL +W+KQPL L I +RH V L++ E R L L
Sbjct: 332 VTSLFQLLNHCKTNAGVRLLNEWIKQPLTSLAEITKRHDLVEYLIDQLELRQILQTDFLP 391
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQN----------VEASN 361
+PD++ + ++ K L+D ++Y+ ++P++ LES +++ V+ S
Sbjct: 392 VVPDIRRITKKLN-KNGNLEDILKLYQFCIKIPEISKTLESFLEDSQTDENIKTLVKESW 450
Query: 362 LNTILS---SLQSLKMMDRKDAVMDKMKEYLE---------------------------- 390
L+ +LS L L+ M +D +E+ E
Sbjct: 451 LDPMLSYTSPLSKLQEMVETTVDLDAYEEHNEFMIKVEFNEELAKIRQELDMMRDQIHTA 510
Query: 391 --STARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDR 445
+ L DK +KLEN G+ R+T + ++Y L TV+ G+ F
Sbjct: 511 HIQASEDLGFDPDKKLKLENHHLHGWCMRLTRNDGKELRKHEKYIELSTVKAGIYFSTSE 570
Query: 446 LATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCA 505
L + +Q+EY+ Q ++V+E++ I+ YT L ++S +LA DV+ SF+ AS+ A
Sbjct: 571 LREVARETSLLQKEYDRQQSALVKEIVNITLTYTPVLEKISIILANLDVICSFAHASSYA 630
Query: 506 PKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
PY+RP M +G+ L RHP++E+Q +++I NDV + G F ++TGPNMGG
Sbjct: 631 VIPYIRPKMYDIGSERKTRLISSRHPVLEMQDDLTFIANDVNLEKGTSDFLIITGPNMGG 690
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR +GV +AQIGCFVPCD A I++VD I RVGA DSQ +G+STFM+EM ETA+
Sbjct: 691 KSTYIRQVGVITLMAQIGCFVPCDEADIAIVDAILCRVGAGDSQLKGVSTFMVEMLETAS 750
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
++K + NSL+IIDELGRGTST+DGFG+A +I+ +AS + F LFATHFHE+ LS +
Sbjct: 751 ILKNASTNSLIIIDELGRGTSTYDGFGLAWAISEFIASQIKCFALFATHFHELTSLSDKL 810
Query: 685 PTFRNVQVSA-LEQ-------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+N+QV A +EQ +D++ LLY+V+PG +S+G+H A++ +P+ +++ A+
Sbjct: 811 SNVKNMQVVAHIEQNADSNQDKDDITLLYKVEPGVSDQSFGIHVAEVVQFPDKIVKMAKR 870
Query: 737 LMKEYE 742
++E E
Sbjct: 871 KVEELE 876
>gi|345309198|ref|XP_003428802.1| PREDICTED: DNA mismatch repair protein Msh2-like, partial
[Ornithorhynchus anatinus]
Length = 607
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/570 (38%), Positives = 330/570 (57%), Gaps = 63/570 (11%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SL +L+RC+TPQG RL+ QW+KQPL D + I ER V V + E R L E LR
Sbjct: 11 SLAALLNRCKTPQGQRLVNQWIKQPLLDKNRIEERLNLVEAFVEDGELRQTLQEDLLRRF 70
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVEASNLNTIL 366
PD+ LA + R+ A L+DCYR+Y+ ++QLP +I LE L+ + A+ L+ +
Sbjct: 71 PDLNRLAKKFQRQAANLQDCYRIYQTINQLPGVIQALEKYEGAHQMLLLAIFATPLSDLR 130
Query: 367 SSLQSLKMM-----------------------------DRKDAVMDKMKEYLESTARRLN 397
S + M + +++ +KM+ L S AR L
Sbjct: 131 SDFSKFQEMIETTLDLNQVENHEFLVKASFDPNLTELRETMNSLEEKMQSALASAARELG 190
Query: 398 LVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQ 454
L A K++KLE++ Q GF +R+T K S+ + ++ LD + GV+F + +L++ N +Y
Sbjct: 191 LEAGKSVKLESNAQMGFYFRVTCKEEKSLRNNKKFNTLDIQKNGVKFNNSKLSSLNEEYT 250
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
+ EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ +T AP PYVRP +
Sbjct: 251 KSREEYEEAQNAIVKEIVNISSGYVEPMQALNDVLAQLDAMVSFAHVATSAPVPYVRPTI 310
Query: 515 KPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
G G L L CRH VE+Q V++IPNDV F+ G +F++VTGPNMGGKSTYIR GV
Sbjct: 311 LDKGHGRLALRGCRHACVEVQDEVAFIPNDVVFERGRQTFHIVTGPNMGGKSTYIRQTGV 370
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
V +AQIGCFVPC++A +S+VD+I RVGA DSQ +G+STFM EM ETA++++
Sbjct: 371 VVLMAQIGCFVPCEAAEVSIVDRILARVGAGDSQLKGVSTFMAEMLETASILR------- 423
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
F G + IA + + F LFATHFHE+ L+ +P N+ V+A
Sbjct: 424 ------------FGCLGHSEYIATRVGT----FCLFATHFHELTALADQLPAVNNLHVTA 467
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP-SGD 753
L D L +LY+V+PG C +S+G+H A++A +P+ ++E A++ E E + P D
Sbjct: 468 LTSNDTLTMLYRVRPGVCDQSFGIHVAELASFPKHVIESAKEKALELEEFQNIGKPRESD 527
Query: 754 ETNNREEEYFKTVQEGEYQMFDFLQQCLSL 783
E+ + ++ ++GE + D L + +L
Sbjct: 528 ESEPAAKRCYREREQGEKIIQDLLSKVKAL 557
>gi|218196464|gb|EEC78891.1| hypothetical protein OsI_19262 [Oryza sativa Indica Group]
gi|222630934|gb|EEE63066.1| hypothetical protein OsJ_17874 [Oryza sativa Japonica Group]
Length = 942
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 282/873 (32%), Positives = 439/873 (50%), Gaps = 125/873 (14%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQR-KSNVVYLVKTMGQKDKTLETVL 59
F FF PQ S+ IR F+R ++Y HGE+A I + + + ++ +G L +V
Sbjct: 26 FISFFKKLPQDSRA-IRLFDRRDYYTAHGENATFIAKIYYHTMSALRQLGSNSDGLSSVS 84
Query: 60 VNKSNLSCFSHILCVISEDKTLETV--------LTNT----------------------- 88
V+K+ + L + D+TLE LT +
Sbjct: 85 VSKTMFETIARNLLLERTDRTLELYEGSGSSWRLTKSGTPGNIGSFEDILFANNDMQDSP 144
Query: 89 ---------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPA-- 131
VG++ VDL +K + E P+D ++N+E+ +V KECLLPA
Sbjct: 145 VTVALFPVFQEGQLYVGLSFVDLTNRKLGLSEFPEDSRFTNVESALVALGCKECLLPADC 204
Query: 132 EYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCL 191
E D K I + N V +T RKK EF DL+QD+ R++R ++ R L
Sbjct: 205 EKSIDLKPLQDAITNCN-VLLTERKKVEFKSRDLVQDLGRIIR---GPVEPVRDLVSQ-F 259
Query: 192 TTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT 251
A L +L++Y EL+ ++ N ++I +Y+ + SA + +L++ + T
Sbjct: 260 DYALGALGALVSYAELLADDTNYGNYTIEKYSLDRYMRLDSAAVRALNI--AEAKTDVNK 317
Query: 252 YDSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
SL G+++R C G RLL +W+KQPL D++ I R V V + E R L Y L
Sbjct: 318 NFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPELRQGLR-YQL 376
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQ 370
+ + D+ L + ++ A L+ ++Y+ ++ + ++L+ + A L+SL
Sbjct: 377 KRMSDIDRLTHALRKRTANLQPVVKLYQSCIRVSYIKNVLQQYDGSFSALIRTKFLNSLD 436
Query: 371 SLKMMDR-----------------------------------KDA---VMDKMKEYLEST 392
DR KD V + + + T
Sbjct: 437 EWLTEDRFGRFASLVETAIDLDQLENGEYRISPRYSSDLAVLKDELSEVENHINNLHKHT 496
Query: 393 ARRLNLVADKTIKLENSPQGFAYRIT----MKLNNSIDDRYTILDTVRGGVRFQDDRLAT 448
A L+L DK +KLE G +RI+ K+ + Y I++T + GV+F +L
Sbjct: 497 AADLDLTIDKQLKLEKGQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKK 556
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
QYQA+ EY + Q+ +V++V+ +SA +++ + +L++ DVL SF+ +T +P P
Sbjct: 557 LGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIP 616
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
YVRP + G ++L RHP +E Q GV++IPND + F ++TGPNMGGKST+
Sbjct: 617 YVRPEITASEEGDIILEGSRHPCLEAQDGVNFIPNDCTLVREKSWFQIITGPNMGGKSTF 676
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR +GV+V +AQ+G FVPCD A+ISV D IF RVGA D Q RG+STFM EM ETA+++K
Sbjct: 677 IRQVGVNVLMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 736
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS------- 681
++ SL+IIDELGRGTST+DGFG+A +I L + TLFATHFHE+ L
Sbjct: 737 ASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFATHFHELTALGHKSGDEH 796
Query: 682 RVIPTF--RNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
+ +P N V A L +LY+V+PG+C +S+G+H A+ A +PE ++ A+
Sbjct: 797 QHVPNLGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAEFANFPEAVVALAKSK 856
Query: 738 MKEYE-------YSLDTKTPSGDETNNREEEYF 763
+E E +S D+K DE ++ + F
Sbjct: 857 AEELEDFSTAPNFSDDSK----DEVGSKRKRVF 885
>gi|361131040|gb|EHL02770.1| putative DNA mismatch repair protein msh-2 [Glarea lozoyensis
74030]
Length = 783
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/651 (35%), Positives = 353/651 (54%), Gaps = 63/651 (9%)
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
I+D + ++ R +F +D+ QD+ RL++ + K+A +LP+ L A +LI
Sbjct: 73 AIIDSCGIAISERPGGDFGTKDIDQDLARLLK----DEKSAGILPQTDLKLAMGSAAALI 128
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
YL +M++ N Q+ ++ D S+++ + ++ + +L+++P G SL G+L+ C
Sbjct: 129 KYLGVMHDNSNFGQYQLYQHDLSQFMKLDASALKALNLMP--GPRDGSKTMSLYGLLNHC 186
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
+TP G RL+AQW+KQPL D I +R V V +TE R + E LR +PD+ LA R
Sbjct: 187 KTPIGSRLMAQWLKQPLMSKDEIEKRQQLVEAFVEDTELRQTMQEEHLRSIPDLYRLAKR 246
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRKDAVM 382
RK A L+D R Y+ V +LP +I+ LE ++ L ++K+ D D++
Sbjct: 247 FQRKMANLEDVIRAYQVVLRLPNIIATLEGVIDE----QYRNPLDEAYTIKLRDYSDSLA 302
Query: 383 DKMKEYLEST------------------------------------------ARRLNLVA 400
K+ E +E+T ++ L
Sbjct: 303 -KLLEMVETTVDLEAMENHEYKIKPEFDDGLRIIQRKLEKSRHEMDVEHRAASKDLGQEI 361
Query: 401 DKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
DK + LEN G+ R+T I + +Y T + GV F +L + ++ +
Sbjct: 362 DKKLFLENHKVHGWCMRLTRAEAGCIRNNKKYQECSTQKNGVFFTTHKLQSCRREFDQLA 421
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
Y Q S+V EV+ ++A Y + L+ V+A DV+VSF+ S AP YVRP M P
Sbjct: 422 ENYNRTQSSLVNEVVSVAASYCPVIEFLAGVIAHLDVIVSFAHCSVHAPTSYVRPKMHPR 481
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
G GS +L + RHP +E+Q + +I NDV + G F ++TGPN GGKSTYIR IGV
Sbjct: 482 GEGSTILKEARHPCMEMQDDIQFITNDVTLERGSSQFLIITGPNCGGKSTYIRQIGVIAL 541
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQIGCFVPC A +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+II
Sbjct: 542 MAQIGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIII 601
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DELGRGTST+DGFG+A +I+ + F++FATHFHE+ L P +N+ V A
Sbjct: 602 DELGRGTSTYDGFGLAWAISEHIIKEIGCFSMFATHFHELTALVDTYPQVQNLHVVA-HI 660
Query: 698 EDN------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+DN + LLY+V+ G C +S+G+H A++ +PE ++ A+ E E
Sbjct: 661 DDNGKAKREVTLLYKVEDGICDQSFGIHVAELVRFPEKVVNMAKRKADELE 711
>gi|146417216|ref|XP_001484577.1| hypothetical protein PGUG_02306 [Meyerozyma guilliermondii ATCC
6260]
Length = 921
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/705 (34%), Positives = 394/705 (55%), Gaps = 65/705 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY----LNDNKNKIVTI 144
+GV +VDL + E D+D +SNLE +++Q KE ++P+ Y + K+ +
Sbjct: 149 IGVGLVDLLNSSIQLCEFEDNDLFSNLETLLLQLGVKEIIVPSNYDPHEETGDAVKLFQV 208
Query: 145 LDR-NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNA-RLLPEMCLTTATHCLRSLI 202
LDR + +T K + F++E + D+ R+V ++ EL A + + + + C +L+
Sbjct: 209 LDRIGNIVVTSVKSSLFNKE-VEHDLARIVEGENIELVLASKGINAIDFPLSLACCSALL 267
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
+YLEL + E FSI + S Y+ + ++ +L++ P + + S+ +L++C
Sbjct: 268 HYLELSSGE-----FSIDKYNLSDYMKLDTSTTKALNIFPASNNYTKPNVSSIFDLLNKC 322
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
++ G RLL+QW+KQPL + I +RH V +LVN+T R+ L + L +PD++ L +
Sbjct: 323 KSLAGSRLLSQWLKQPLTSVSDITDRHELVELLVNDTSLRVFLTQDWLPRVPDVKRLLKK 382
Query: 323 IG---RKKAG-----LKDCYRVYEGVSQLPKLISIL------------------ESLVQN 356
I +K +G L D R+Y+ V +P+L+S+L +SL++
Sbjct: 383 IANGVKKSSGNENKKLDDVVRLYQLVIVVPELLSMLNDNPLILKYWTEPIQKAHKSLIKF 442
Query: 357 VEASNLNTILSSLQS------------------LKMMDRKDAVMDKMKEYLESTARRLNL 398
E LS L S +K+ ++ +A + +K+ + LNL
Sbjct: 443 QELVETTIDLSPLDSSDLLHNDFNIKPEFDESLVKINNQLEATLSDIKQCQVDASDDLNL 502
Query: 399 VADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQA 455
DK +KLE + G+ +R+T +N + + +Y TV+ G F L T QYQ
Sbjct: 503 EVDKKLKLEKHQNHGWCFRVTRNDSNVLRNNSKYQQFQTVKAGTYFSTKELRTLALQYQK 562
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
EY + Q+ ++ E++ IS Y + LA DV+VSF+ S AP PYVRP +
Sbjct: 563 YSDEYNSKQRELIREILSISLTYLLVFMPFALTLAHIDVIVSFANLSVFAPTPYVRPIIH 622
Query: 516 PMG---TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSI 572
+ + +L L RHP++E+Q +++I NDV G+ F+++TGPNMGGKSTYIR +
Sbjct: 623 GLNDKESRTLKLKDARHPVLEVQDDINFIANDVAMSPGK-QFSIITGPNMGGKSTYIRQV 681
Query: 573 GVSVFLAQIGCFVPC-DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
GV + QIGCFVP + A + V D I +RVGA DSQ +G+STFM+EM ET++++ +
Sbjct: 682 GVIALMNQIGCFVPAREGAELPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATASA 741
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
NSL+IIDELGRGTST+DGFG+A +I + ++ FTLFATHFHE+ L+ P +N+
Sbjct: 742 NSLIIIDELGRGTSTYDGFGLAWAILEHIIKEKECFTLFATHFHELTQLADKYPLVQNLH 801
Query: 692 VSA-LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
V A +EQ D++ L+Y+V+PG KS+G+H A++ +P ++ A+
Sbjct: 802 VVAHVEQADDITLMYRVEPGVSDKSFGIHVAELVKFPAKIVNMAK 846
>gi|392576842|gb|EIW69972.1| hypothetical protein TREMEDRAFT_30126 [Tremella mesenterica DSM
1558]
Length = 948
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 249/751 (33%), Positives = 399/751 (53%), Gaps = 68/751 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK--NKIVTIL 145
TVG A +D+ K + E DD + N E++++Q KEC+LP++ + K+ T++
Sbjct: 168 TVGCAFLDVQEKTLGVSEYVDDANFGNTESLLIQLQVKECILPSDEKRADVELTKLRTMI 227
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
DR + +T R+ ++ ++ QDV+RL+ + + LPE L A L +L+ Y
Sbjct: 228 DRCGLVITERRSADYKAGNIEQDVSRLLDGGHT----STTLPEFDLKLAMSSLAALLVYT 283
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
L+ + +QF ++ D ++Y+ + ++ + +L ++P SL G+L++C+T
Sbjct: 284 NLVTSPQYEHQFRLYRHDLTQYMKLDASAVKALSLMPNPQELGGGRNMSLYGLLNQCKTS 343
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
QG RLL +W+KQPL +L I +R V V++ AR L E L +PD ++ ++ R
Sbjct: 344 QGQRLLGRWLKQPLVNLHEIRQRQGIVEAFVDDALARQTLQEQFLSRMPDFHRISKKLHR 403
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRKD------ 379
A L + RV+ + + +I +LE+L + E L ++++ + + D +D
Sbjct: 404 NVASLDEVVRVFYAIQLIGPMIEVLETLNTSEENKQL---IATIYVIALRDHEDKLTTYS 460
Query: 380 -----------------------------------AVMDKMKEYLESTARRLNLVADKTI 404
AV + E L L K +
Sbjct: 461 QMVEDTVDLNDKTSHNHVLQASFDPKLEEYKTQLMAVRSALDEEHAKVGEELGLDIGKKL 520
Query: 405 KLE-NSPQGFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
LE + +++RIT I ++ Y L T + G F L + Y + +Y
Sbjct: 521 HLERHQVYNYSFRITKAEAGLIRNKKQYRDLATQKSGTIFTTATLKGLSEDYDRLMDKYN 580
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q+++V+EV+ I+A YT L L +++A DV VS + S A PYVRP + G +
Sbjct: 581 DKQRTLVKEVVSIAASYTPVLEALDNLIAAIDVTVSLARVSANANTPYVRPVLFEKGKPT 640
Query: 522 -LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+++ RHP +E+Q VS+I ND K G+ F ++TGPNMGGKSTYIR IGV +AQ
Sbjct: 641 HVIVRGARHPCLEVQDDVSFIANDHEMKKGKCEFVVLTGPNMGGKSTYIRQIGVIALMAQ 700
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IGCFVP D A + V D I RVGA DSQ +G+STFM EM ETAT+++ T++SL+IIDEL
Sbjct: 701 IGCFVPADEAQLPVFDCILARVGAGDSQLKGVSTFMAEMLETATILRSATKDSLIIIDEL 760
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA------ 694
GRGTST+DGFG+A +I+ +A+ + F LFATH+HE+ L++ P +N+ V A
Sbjct: 761 GRGTSTYDGFGLAWAISEHIATKIRCFCLFATHYHELTALNQTQPHVKNLHVEAHVQPIK 820
Query: 695 ---LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
+Q+ ++ LLY+V G C +S+G+H A++A +PE +++ A+ +E E D +
Sbjct: 821 GGKSKQDRDITLLYKVTEGICDQSFGIHVAELAQFPESIIKLAKRKAEELE---DFGDGA 877
Query: 752 GDETNNREEEYFKTVQEGEYQMFDFLQQCLS 782
DE+ N+ E +G M +FLQ S
Sbjct: 878 NDESLNKYSE--TETDQGAALMQEFLQTWKS 906
>gi|302765627|ref|XP_002966234.1| hypothetical protein SELMODRAFT_85179 [Selaginella moellendorffii]
gi|300165654|gb|EFJ32261.1| hypothetical protein SELMODRAFT_85179 [Selaginella moellendorffii]
Length = 940
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 271/865 (31%), Positives = 431/865 (49%), Gaps = 148/865 (17%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQR-KSNVVYLVKTMGQKDKTLETVL 59
F FF P+ + IRFF+R +++ HG++A LI R ++ +G TL +V
Sbjct: 23 FIKFFRKLPE-DPSVIRFFDRRDYFTAHGDNASLIARLYYRTTTALRQLGSGSDTLSSVS 81
Query: 60 VNKS-------------------------------------NLSCFSHILC--------- 73
++KS L F +L
Sbjct: 82 ISKSMFEVITRDVLLEKTEYNVELYEGSGANWKLAKSATPGKLGSFEDVLFSSIDMHDTP 141
Query: 74 VISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
V+ T+ VG+A D+ + E DDD Y+NLE+ ++ +EC+LPAE
Sbjct: 142 VVMAVWTVARDQEQLVGIAFTDMTRRTLGTLEFLDDDQYTNLESALLALGCRECVLPAEN 201
Query: 134 LND-NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+ ++ +L R V +T +KK EF D+ QD++RL++ +
Sbjct: 202 AKSVDGRRLRDVLARCNVRLTEKKKAEFKSRDIEQDLSRLIK-----------------S 244
Query: 193 TATHCLRSLI--------------NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSL 238
T+ LR L+ Y ++ ++ N ++ + +Y+ + A + +L
Sbjct: 245 TSVEELRELVVKYEVASAALAALLAYTDIFADDSNHGKYRLQQYSLDRYMRLDVAALRAL 304
Query: 239 HVLPQQGSTSAQTYDSLLGILDRCRTP-QGHRLLAQWMKQPLKDLDAIVERHAAVNILVN 297
HVL + + + +L G+++ T G RLL +W+KQPL D+D I RH V + V
Sbjct: 305 HVLESKNDPNKNS--TLFGLMNHTSTAGMGKRLLNRWLKQPLLDVDEIKHRHDVVQMFVE 362
Query: 298 NTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY----------------EG-- 339
+ E R +L L+ +PD++ L ++ R +A L+D ++Y EG
Sbjct: 363 DAELRESLKN-CLKRVPDVERLTRKLERSRATLQDLVKLYQVSVRLSVIKDALERYEGEF 421
Query: 340 -----------------VSQLPKLISILESLVQNVEASNLNTILS-----SLQSLKMMDR 377
L + +++ES + + N I+S SL+++K DR
Sbjct: 422 ASAVEERYVVPLREWTLAEHLGRYDALIESAIDLDQIKNGEYIISASYDSSLKTIKA-DR 480
Query: 378 KDAVMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRYTIL 432
D V ++++E E A L+L ADK++KL+ + Q G +RIT K + + +Y L
Sbjct: 481 -DTVEEEIREAHEQAANDLDLPADKSLKLDKTTQWGHVFRITKKEEPKVRKKLAVQYITL 539
Query: 433 DTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQF 492
+T + G++F +L + +Y ++ Y Q+ +V+ ++ +S Y + N +++LA+
Sbjct: 540 ETRKDGIKFTTSKLRRLSERYGSLTENYTNTQRDLVKRLVQVSQSYVEIFNGAANLLAEL 599
Query: 493 DVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFK-SGE 551
DVL+SF+ + +P PYVRP + G ++L RHP VE Q V++IPND G+
Sbjct: 600 DVLLSFADLAVSSPTPYVRPIITGQNEGDIILEGSRHPCVEAQDDVNFIPNDCRLVIRGK 659
Query: 552 VSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRG 611
F ++TGPNMGGKSTYIR IGV++ +AQ+GCFVPCD A IS+ IF RVGA D Q RG
Sbjct: 660 SWFQIITGPNMGGKSTYIRQIGVNILMAQVGCFVPCDRAEISIRSCIFARVGAGDCQLRG 719
Query: 612 ISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFA 671
+STFM EM ET+ ++K TE SL+I+DELGRGTST+DGFG+A +I + + TLFA
Sbjct: 720 VSTFMAEMLETSAILKSATETSLIIVDELGRGTSTYDGFGLAWAICEYIVDVTRAPTLFA 779
Query: 672 THFHEIALLS-RVIPT-----------FRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYG 717
THFHE+ +S R P+ N VSA L +LY+V+ G C +S+G
Sbjct: 780 THFHELTSISHRQGPSAHGPSKGPPVGISNFHVSAHIDPSSRKLTMLYKVEDGPCDQSFG 839
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYE 742
+H A+ A +PE ++ A+ E E
Sbjct: 840 IHVAEFARFPECVVVLAKQKAAELE 864
>gi|363750187|ref|XP_003645311.1| hypothetical protein Ecym_2796 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888944|gb|AET38494.1| Hypothetical protein Ecym_2796 [Eremothecium cymbalariae
DBVPG#7215]
Length = 954
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 247/713 (34%), Positives = 392/713 (54%), Gaps = 73/713 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GV+ +D ++ K + +I D++ YSNLE+ I+Q KECLLP ND+ KI +
Sbjct: 157 LGVSFLDSNSHKVGLLDIVDNEVYSNLESFIIQVGVKECLLPDMRNNDSTKGELKKITGV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EF+ ++ D+ +L D + + E+ L+ +L+NY
Sbjct: 217 IDRCGSVVTFVKISEFNSKNTESDLAKLC--GDDLVTSLPKFSELSLSATG----ALLNY 270
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ---------QGSTSAQTYDSL 255
++L + N ++ + S+++ + ++ + +L++ STS S+
Sbjct: 271 MQLTKDVSNEGKYELIEHSLSQFMKLDASAIKALNIFANGSTAKPGLMNTSTSGGKITSI 330
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+L++C+T G RLL +W+KQPL DL I +RH V+ L++ E R L + L +PD
Sbjct: 331 FQLLNKCKTNAGVRLLNEWLKQPLCDLAEIEKRHDLVDYLIDQLELRSLLRDDYLPLVPD 390
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL-ESLVQNVEASNLNTILSSLQ---- 370
M+ L ++ K L+D +VY+ ++P++ S+L E+L E+S + ++ +
Sbjct: 391 MRRLTKKLS-KNGTLEDVLKVYQFSHRIPEINSVLKENLDDLPESSRIKKLVMDIWYHPL 449
Query: 371 ------------------SLKMMDRKDAVM--------------------DKMKEYLEST 392
L+ + + M D MK
Sbjct: 450 EESVHPLFKFQEMIETTVDLETYEENNEFMIKAEFNEELTQTKSQLVRLKDDMKTIHLDA 509
Query: 393 ARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATA 449
A L DK +KLEN G+ R+T ++ +Y L TV+ G+ F L
Sbjct: 510 ADDLGFDPDKKLKLENHHVHGWCMRLTRNDAKALRQHRKYLELSTVKAGIYFSTKELKQI 569
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
+ + +Q EY+ Q ++V+E++ I+ Y L +LS +LA DVL SF+ ++ AP PY
Sbjct: 570 SEEIATLQEEYDRQQSTLVKEIVNITITYAPVLEKLSIILATLDVLCSFAHVASYAPIPY 629
Query: 510 VRPCMKPMGTG--SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
VRP M PM + L + RHP+VE+Q V++I N+V + E F ++TGPNMGGKST
Sbjct: 630 VRPKMYPMDSDQRKTKLIESRHPLVEVQDDVTFIANNVILERQESEFLIITGPNMGGKST 689
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
YIR +GV ++QIGCFVPCDSA I+V D I RVGA DSQ +G+STFM+EM ETA+++K
Sbjct: 690 YIRQVGVITLMSQIGCFVPCDSAEIAVSDAILCRVGAGDSQVKGVSTFMVEMLETASILK 749
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
TENSL+IIDELGRGTST+DGFG+A SI+ + + F LFATHFHE+ L+ PT
Sbjct: 750 NATENSLIIIDELGRGTSTYDGFGLAWSISEYIIKEIKCFALFATHFHELTSLADDCPTV 809
Query: 688 RNVQVSALEQE-----DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
+N+ V A ++ D++ LLY+V+ G +S+G+H A++ +P+ +L+ A+
Sbjct: 810 KNMNVIAHIEDGTHISDDITLLYKVEQGISDQSFGIHVAEVVQFPDKILKMAK 862
>gi|344305584|gb|EGW35816.1| hypothetical protein SPAPADRAFT_48774 [Spathaspora passalidarum
NRRL Y-27907]
Length = 991
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 263/827 (31%), Positives = 423/827 (51%), Gaps = 108/827 (13%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN------KIV 142
VGV ++D+ + E D++ YSNLE++++Q KE +LP+ Y +N K+
Sbjct: 155 VGVCLIDVSNSSILLSEFDDNELYSNLESLMLQLGVKEVILPSNYNPQEENSNPEIIKLF 214
Query: 143 TILDR-NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARL------LPEMCLTTAT 195
+LD+ + ++ K + F+ +D+ QD+ +LV +D L + + +
Sbjct: 215 QVLDKIGNIVVSAAKSSSFNHKDIEQDLTKLVVDEDDNESTIELTLTSKGINSLDFPLSL 274
Query: 196 HCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST----SAQT 251
C +LI YL+L+ + F+I+ + S ++ + S+ M +L++ PQ GS+ S+
Sbjct: 275 SCCNALIQYLDLLGELNTDKAFTINKYNLSNFMKLDSSTMKALNIFPQAGSSTYKSSSGN 334
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
S+ +L++C+T G RLL+QW+KQPL +L+ I ER A V +L+ NT R+ + + L
Sbjct: 335 ITSIFELLNKCKTTAGSRLLSQWLKQPLTNLNLIQERQALVELLIENTGLRVAVTQDILP 394
Query: 312 GLPDMQSLAMRI--------GRKKAGLKDCYRVYEGVSQLPKLISIL------------- 350
+PD++ L I G + L D ++Y+ V LP LI L
Sbjct: 395 QVPDIKRLTKNIALNIHKATGNENKKLDDVVKLYQMVLTLPNLIDTLTTTLSESSDQEEL 454
Query: 351 ----------------ESLVQNVEASNLNTILSSLQS------------------LKMMD 376
+SL + E LS L S +++ +
Sbjct: 455 KSYIKKYWLDPIEKYYQSLTKFAELVQTTIDLSPLDSGDLLHNDFNIRPEFDSSLVEINN 514
Query: 377 RKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRIT----MKLNNSIDDRYTI 431
+ + + +K+ A LN+ DK +KLE Q G+ +R+T + L N +Y
Sbjct: 515 KLQSSLANIKQLHADVADDLNMEVDKKLKLEKHIQHGWCFRVTRIDSVVLRNK-GKKYNE 573
Query: 432 LDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQ 491
L TV+ GV F L + +Y EY Q+ +++EV+ I+ Y+ LS LA
Sbjct: 574 LQTVKAGVFFTTKELVGLSQEYYDSYHEYNQKQKELIKEVLEIALTYSSVFLNLSLSLAH 633
Query: 492 FDVLVSFSIASTCAPKPYVRPCMKPMGTG---------SLVLNQCRHPIVELQGGVSYIP 542
DVL SF+ + AP YV+P ++P+ + L L + RHP++E+Q +++I
Sbjct: 634 LDVLNSFANVAVIAPTAYVKPKLQPLASEVESVEFTNRKLQLQEARHPLLEVQDDINFIA 693
Query: 543 NDVYFKSGE----VSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA----TISV 594
NDV+ + SF ++TGPNMGGKSTYIR IGV ++QIGCF+P I +
Sbjct: 694 NDVFLSNDSNAKGKSFVIITGPNMGGKSTYIRQIGVIALMSQIGCFIPASDVDFIPEIPI 753
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
D I +RVGA DSQ +G+STFM+EM ET++++ T NSL+IIDELGRGTST+DGFG+A
Sbjct: 754 FDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATHNSLIIIDELGRGTSTYDGFGLAW 813
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPT-FRNVQVSA------LEQEDNLVLLYQV 707
SI+ L S +Q F+LFATHFHE+ LS P N+ V A +++D++ L+Y+V
Sbjct: 814 SISEHLISSKQCFSLFATHFHELNQLSEKYPNKVDNLHVVAHLEKTDAKEDDDITLMYKV 873
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQAR----DLMKEYEYSLDTKTPSGDETNNREEEYF 763
+PG KS+G+H A++ +P ++ A+ +L +E + D + T EE
Sbjct: 874 EPGISDKSFGIHVAELVKFPTKIINMAKRKASELQEEKQDDADNEYIQSKRTKCSPEEVT 933
Query: 764 KTVQEGEYQMFDFLQQCLSLSKQK--DTNRILHLQETQEPGIEEYQS 808
V++ + + + +C +K K T I L+E E QS
Sbjct: 934 TGVKKLKSILKSWKAECYDGTKCKFDSTTTIAKLKEILSKESEAIQS 980
>gi|320581420|gb|EFW95641.1| DNA mismatch repair protein MSH2 [Ogataea parapolymorpha DL-1]
Length = 938
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 263/846 (31%), Positives = 440/846 (52%), Gaps = 122/846 (14%)
Query: 3 FYLFFF--PQKSKTTIRFFNRVEFYCVHGEDAELIQRKSNVVY----LVKTMGQKDKTLE 56
FY +F P KS T+R ++ E+Y V EDAEL+ ++++Y +VKT + +T++
Sbjct: 19 FYSKYFRLPPKSARTLRVVDKGEYYIVLDEDAELV---ADLIYKTQSVVKTATAEKRTVQ 75
Query: 57 TVLVNKSNLSCFSHILCVISEDK---------TLETV----------LTNT--------- 88
+ ++ + + ++ V S K + T L NT
Sbjct: 76 YITLSPAVFANLLKLVVVDSGHKLEIYSKNWDNMRTASPGNLSEIEELINTADLNAVSIL 135
Query: 89 --------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL 134
+G++ D + K + E D+D +SNLEA+++Q KECL+PA
Sbjct: 136 AALKLVSSSSEGKKLGLSFYDPNAKILGVTEFYDNDLFSNLEALLIQTGVKECLVPASAS 195
Query: 135 ND-NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELK-NARLLPEMCLT 192
+D + +KI ++DR + ++ + +FS++++ QDV RL +EL +A L + +
Sbjct: 196 SDPDMDKIKQLIDRCDIVVSEGRSADFSDKNIEQDVARLT---GNELTLSANELSSLHVG 252
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG-STSAQT 251
A C +++ YL L+ ++ N ++ D +++ + A + + ++ P + +
Sbjct: 253 LA--CCNAILVYLSLLADQSNFGSINVVKYDLEQFMKLDYAAVRATNLFPPPNYNNTMNK 310
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+L+ C+T G RLL+QW+KQPL D+ I RH+ V L+++ R +L L
Sbjct: 311 TSSLFGLLNNCKTVGGTRLLSQWLKQPLVDVQEIQNRHSIVGHLIDDLNLRESLQTQFLN 370
Query: 312 GLPDMQSLAMRIG--RKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASN-------- 361
+PD+ L R+ R L D R+Y+ +LP L+ L + + ++E N
Sbjct: 371 EVPDISRLVKRLANPRGTKSLDDVIRLYQLCIRLPDLLDFLGTSMDSLEPENAVRKLFQE 430
Query: 362 ---------------LNTILSSLQSLKMMD-------------------------RKDAV 381
++ + L+ +D + + V
Sbjct: 431 FWIEPIAQYAGALSKFQEMVETTVDLESLDNASSAQGSMVAINPEFDASLMEISHKIEQV 490
Query: 382 MDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGG 438
+M+ E L + DK +KLE + G+ +R+T ++ I +Y L TV+ G
Sbjct: 491 KSQMRHEHELAGEDLGMELDKKLKLEIHHVHGWCFRLTRNDSSCIRGKKKYRELSTVKAG 550
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
V F L+ N++ ++++ +Y+ Q +V+E++ I+A Y+ +LS L++ DVLVSF
Sbjct: 551 VYFTTSELSQLNSEVKSLEEQYDNGQSEVVKEIVTITATYSSIFLKLSIELSKLDVLVSF 610
Query: 499 SIASTCAPKPYVRPCMKPMGTGS----LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSF 554
+ AP PY RP K G GS + L + RHP +E Q G+S+IPND+ F F
Sbjct: 611 AHTCAFAPVPYTRP-EKIHGLGSPERRVRLREARHPCLEQQDGLSFIPNDINFCRDSEEF 669
Query: 555 NLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC-DSATISVVDQIFTRVGAADSQYRGIS 613
++TGPNMGGKSTYIR++GV + QIGC+VP + A + + D + RVGA+DSQ +G+S
Sbjct: 670 LIITGPNMGGKSTYIRTMGVIALMNQIGCYVPAGEGAELCIFDSVLARVGASDSQLKGVS 729
Query: 614 TFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATH 673
TFM EM E ++++K T NSL+I+DELGRGTST+DGFG+A +I+ + + FTLFATH
Sbjct: 730 TFMAEMLEMSSILKTATSNSLIIVDELGRGTSTYDGFGLAWAISEHICKEIRAFTLFATH 789
Query: 674 FHEIALLSRVIPTFRNVQVSA----LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
F+E+ L+ +N+QV A N+ LLY+V+PG +S+GVH A++ +P
Sbjct: 790 FYELTALADKYTAVKNLQVVAHTDTSSDAKNITLLYKVEPGVSDQSFGVHVAEIVKFPRK 849
Query: 730 MLEQAR 735
++E A+
Sbjct: 850 IIEMAK 855
>gi|328870366|gb|EGG18740.1| mutS like protein [Dictyostelium fasciculatum]
Length = 923
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 253/773 (32%), Positives = 412/773 (53%), Gaps = 65/773 (8%)
Query: 63 SNLSCFSHILCVISEDKTLETVL-------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNL 115
NL F IL + +D++L L +G A D K + + D+D+ SNL
Sbjct: 156 GNLQMFEDILNI--KDQSLMVALRVSTIEGNRVIGAAFGDSTLKTIGVLQFIDNDHLSNL 213
Query: 116 EAIIVQKSPKECLLPAEYLND-NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVR 174
+ ++Q KECL+ + N + K++ L ++V T ++F+ +++ QD+ RL+
Sbjct: 214 SSFLLQMGIKECLISVDKKNSVDCKKVMDKLQDSEVPFTEVPNSDFNTKNIEQDLTRLL- 272
Query: 175 FDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAV 234
+ N +L E+ A L LI +L+L++N+ +F + S + ++ + +A
Sbjct: 273 ---GSINN--VLNEIEKELAMQSLSCLIKHLDLLSNQSYFGKFKLVSFNLDNFMRLDAAT 327
Query: 235 MSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNI 294
L+++ T+ Q S+ +LD+C TP G R L+QW++QPL D + I R V I
Sbjct: 328 FKGLNIISSD-PTNKQGM-SIFNLLDKCNTPMGSRKLSQWVRQPLVDQEEIETRLNFVEI 385
Query: 295 LVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL---- 350
VN E R L L+ + D++ L+ ++ KA L+D +Y GV Q ++
Sbjct: 386 FVNALELRQALRSNDLKKIGDLERLSKKLVGGKATLEDVVNLY-GVVQRLSVLLSSLRSY 444
Query: 351 ----ESLVQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTAR------------ 394
+V++ L I++ Q M K +D+ E E R
Sbjct: 445 EDQGSEMVESTFTQPLEQIIAEFQQFSAMVEKTVDLDQAYETHEYVIRSSFSDELSEIHN 504
Query: 395 -------RLNLVADKT----------IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDT 434
++N + +K +KL S + G+ R++ K I + +Y + T
Sbjct: 505 KKQNCMKKINQLREKIADDLGIDEARVKLHQSDKDGYLVRLSRKDEKLIRGNAKYIVYGT 564
Query: 435 VRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDV 494
+ GVRF + N Y + +Y QQ +V+ + I+ + ++ L ++A DV
Sbjct: 565 QKDGVRFSTSDIRKLNEAYMSSSVQYNEKQQGLVQRALEITTSFVPLIDDLCSLIATLDV 624
Query: 495 LVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSF 554
S S+ AP PYVRP + PMG G++ + RHP VE+Q V++I ND+ + +F
Sbjct: 625 FASLGHVSSSAPSPYVRPIVHPMGKGNITIVGGRHPCVEVQDNVNFISNDIDLTRDKSTF 684
Query: 555 NLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIST 614
++TGPNMGGKST+IR +G+ +AQIGCFVP + A IS+VD I TR+GA DSQ RG+ST
Sbjct: 685 QIITGPNMGGKSTFIRQVGIITLMAQIGCFVPAEQAEISIVDCILTRIGAGDSQLRGVST 744
Query: 615 FMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHF 674
FM EM ETA ++K T+NSL+IIDELGRGTST+DGFG+A IA + F LFATHF
Sbjct: 745 FMAEMLETAYILKTATKNSLIIIDELGRGTSTYDGFGLAWGIAEYICHQIGAFCLFATHF 804
Query: 675 HEIALLSRVIP-TFRNVQVSA-LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
HE+ +L ++P T +N+ V A + L L+Y+VK G+C +S+G+H A MAG+P+ +++
Sbjct: 805 HELTVLQEILPLTVKNLHVQANVNDHSGLTLMYKVKEGACDQSFGIHVAIMAGFPDQVVQ 864
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTV---QEGEYQMFDFLQQCLS 782
AR KE E S ++ + + ++ ++ + FK++ Q+ + ++F+ + LS
Sbjct: 865 VARLKAKELE-SFESNSLASLDSVSQFIQDFKSLDMQQQDQDKVFNLVNNLLS 916
>gi|242216709|ref|XP_002474160.1| predicted protein [Postia placenta Mad-698-R]
gi|220726705|gb|EED80646.1| predicted protein [Postia placenta Mad-698-R]
Length = 949
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 255/793 (32%), Positives = 415/793 (52%), Gaps = 104/793 (13%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLE-------AIIVQK---SPKECLLPAEYLN 135
T TVG+A D +T++ + + D+D +SN+E +I K S KE L+P
Sbjct: 172 TKTVGIAFADTNTREIGVADFVDNDLFSNVEVCLSLCESISTGKNDLSVKEALIPTGTTT 231
Query: 136 DNK------NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELK---NARLL 186
K+ +L+R V +T RK +EF+ +++ D+ +L+ +A L+
Sbjct: 232 GTTERDIELKKVKELLERCGVVITERKPSEFTAKNIKDDMAQLLTPSSLPSSSNVDASLV 291
Query: 187 ---PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ 243
E+ L A L +L++YL L+++ N +SI + D S+++ + ++ + +L++
Sbjct: 292 VHAAELSLPVAPSALSALVSYLSLLSDPSNRGAYSIRTHDLSQFMKLDASALRALNL--- 348
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
T A QG RLL W+KQPL +L I +R V I V +T R
Sbjct: 349 ---TEAPA--------------QGSRLLGSWLKQPLVNLHEIHKRQNLVEIFVEDTSTRR 391
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------ 357
L + L+ +PDM + R G+ A L+D RVY+ + + + + ++L+
Sbjct: 392 TLQDEYLKMMPDMHRICKRFGKSVASLEDVVRVYQAILKGVETVEDYKALIDEAYLANHT 451
Query: 358 ------------------------EASNLNTIL-----SSLQSLKMMDRKDAVMDKMKEY 388
E N N ++ S LQ+L D+ + D + E
Sbjct: 452 HPGHDFDISLSKYSEMVQQTLDLDELENHNFVIKPEYDSRLQAL--ADKLKEIRDSLDEE 509
Query: 389 LESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDR 445
+ R L DK + LENSP G+ +R++ N + +Y L T++ G F
Sbjct: 510 HQEVGRDLGFELDKKLHLENSPTHGYCFRVSKSDWNVVHRSKKYIDLGTLKSGQFFTTTT 569
Query: 446 LATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCA 505
L + ++ + Y Q +V+EV+ I+A YT L ++VLA DV+VSF+ + A
Sbjct: 570 LKELSDDHKETTQMYSKTQSGLVKEVVNIAATYTPVLESWNNVLAHLDVIVSFAHVAVNA 629
Query: 506 PKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGK 565
P+ YV+P + G+GSL+L RHP +E+Q +S+IPNDV + TGPNMGGK
Sbjct: 630 PESYVKPKLMEKGSGSLILKDARHPCLEVQDDMSFIPNDVEM--------IKTGPNMGGK 681
Query: 566 STYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATV 625
STYIR GV +AQ G FVPC A+I + D + RVGA DSQ +GISTFM EM ETAT+
Sbjct: 682 STYIRQTGVIALMAQTGSFVPCSEASIPIFDSVLCRVGAGDSQLKGISTFMAEMLETATI 741
Query: 626 IKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP 685
++ +++SL+IIDELGRGTST+DGFG+A +I+ +AS F LFATHFHE+ L + IP
Sbjct: 742 LRSASKDSLIIIDELGRGTSTYDGFGLAWAISEHVASEIHAFCLFATHFHELTALDQEIP 801
Query: 686 TFRNVQVSA-------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLM 738
+N+ V A +E ++ LLY+V+PG C +S+G+H A++A +PE++++ A+
Sbjct: 802 HVKNLHVVAHVSKSDDSARERDITLLYKVEPGVCDQSFGIHVAELANFPENVVKLAKRTA 861
Query: 739 KEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKDTNRILHLQET 798
E E ++++ +G+ E V+EG + + L+ S ++D + I+ ++++
Sbjct: 862 DELE-DFNSESKAGESQLPPE-----VVEEGTRIVEELLRTWASQISERDGDDIV-MEDS 914
Query: 799 QEPGIEEYQSFDK 811
++ E + +
Sbjct: 915 EDSAATELEKLKR 927
>gi|443898651|dbj|GAC75985.1| mismatch repair ATPase MSH2 [Pseudozyma antarctica T-34]
Length = 726
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/636 (35%), Positives = 359/636 (56%), Gaps = 56/636 (8%)
Query: 152 MTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNE 211
M ++ +FS +++ QD+ RL++ + + + +PE+ L A +L++YL L+ +E
Sbjct: 1 MFDNRRADFSGKNIEQDLRRLLKDESAGIT----IPELDLKVAMAAAAALVSYLALLTDE 56
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
N Q++I + D S+Y+ + ++ + +L++ P+ G T + S+ G+L+RCRT QG RLL
Sbjct: 57 HNFGQYTIRTHDLSQYLRLDNSALRALNLFPEPGQTGSSKNTSVFGLLNRCRTGQGQRLL 116
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+KQPL ++ AI +R V + V + +R N+ L+ +PDM ++ R + A L+
Sbjct: 117 GQWLKQPLVNVHAIQQRQDLVEVFVRDNSSRQNVQSDFLKLMPDMHRISKRFQKGVATLE 176
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRK------------- 378
D RVY+ V +LP LI L + EA L + ++ LK+ +
Sbjct: 177 DVVRVYQAVLRLPGLIQTLADIDTPSEAHQLLLDSTYIEPLKLHEAALAKFIELVEATLD 236
Query: 379 --------------------------DAVMDKMKEYLESTARRLNLVADKTIKLENSP-Q 411
D DK+ E + + L + +K + LEN
Sbjct: 237 LNELTHHNFVIKPDFDDNLRQIKEALDDTRDKLDEQHRAAGKELRMDTEKKLHLENHHVY 296
Query: 412 GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G+ R+T + + ++ Y+ + TV+GG+ F ++ L +T ++ + Y Q +V+
Sbjct: 297 GYCLRVTRTDASLVRNKKGYSDIATVKGGLYFTNEALRDLSTDFKDLSERYNRSQSGLVK 356
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCR 528
EVI I++ Y L +L+ VLA DV+VSF+ S AP PYV+P + GT + V L + R
Sbjct: 357 EVIQIASSYCPPLEKLNVVLAHLDVIVSFAHVSESAPVPYVKPIVSEKGTNADVELREAR 416
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC- 587
HP +E+ V++IPND G F ++TGPNMGGKSTYIR +G+ +AQ+GCFVP
Sbjct: 417 HPCLEVMDDVNFIPNDTEMVRGASEFLVITGPNMGGKSTYIRQVGIMALMAQVGCFVPAA 476
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
+ A + V D I RVGA DSQ +G+STFM EM ETAT++K T +SL+IIDELGRGTST+
Sbjct: 477 EGARLPVFDCILARVGAGDSQLKGVSTFMAEMLETATILKTATADSLIIIDELGRGTSTY 536
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA--------LEQED 699
DGFG+A +I+ +A++ + LFATHFHE+ L+ RN+ V A Q+
Sbjct: 537 DGFGLAWAISEWIATNVRCKCLFATHFHELTNLASQQAHVRNLHVVAHVEQRKGGSRQDR 596
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
++ LLY+V+PG +S G++ A++A +P ++ A+
Sbjct: 597 DITLLYKVEPGISDQSLGINVAELANFPPSVIALAK 632
>gi|260945917|ref|XP_002617256.1| hypothetical protein CLUG_02700 [Clavispora lusitaniae ATCC 42720]
gi|238849110|gb|EEQ38574.1| hypothetical protein CLUG_02700 [Clavispora lusitaniae ATCC 42720]
Length = 989
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 250/759 (32%), Positives = 416/759 (54%), Gaps = 106/759 (13%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN-------KI 141
VGV +VDL K Y+ E D+D +SNLE++++Q + KE +LP+ Y D + K+
Sbjct: 151 VGVCLVDLSNKALYVSEFDDNDLFSNLESLLLQVNVKEVVLPSTYNPDPTDASSGDVIKL 210
Query: 142 VTILDRNKVCMTGRKKNE-FSEEDLMQDVNRLVRFD--DSELKN--ARLLPEMCLTTATH 196
+L++ + G K+ FS +L QD+ +++ D+E N +L + +A H
Sbjct: 211 FQVLNKIGSIVVGSVKSSLFSAANLDQDLGKIITAQNIDTEAANNIELILASKGIDSAEH 270
Query: 197 -----CLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ---GSTS 248
C +L+ YL L++++D+ + FSI + + ++ + S+ + +L++ PQQ G ++
Sbjct: 271 SLSFACCNALVQYLGLLSDDDSPS-FSIDKYNLASFMKLDSSTLRALNIFPQQQAGGLSN 329
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
+ S+ +L++C+T G RLL+QW+KQPL D +AI RH+ V ++N+T R+ + +
Sbjct: 330 SSAVSSIFDLLNKCKTAAGTRLLSQWLKQPLTDAEAIENRHSLVGHMINDTNLRVFVSQE 389
Query: 309 ALRGLPDMQSL--AMRIGRKKAG------LKDCYRVYEGVSQLPKLISIL---------E 351
L +PD++ L M G KK L++ R+Y+ ++ LP L+++L E
Sbjct: 390 WLPQVPDVKRLLKKMATGLKKPAASENKKLEEVVRLYQLITSLPNLLNMLQMSIDDCTDE 449
Query: 352 SLVQNVEASNLNTI-------------------LSSLQS--------------------- 371
S+ + + S L I LS L S
Sbjct: 450 SVKKLCKESWLEPISKNHQALLKFQELVETTIDLSPLDSSSAHDLLNAEFNIKPEFDESL 509
Query: 372 LKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI----D 426
+ + D A K+K+ E LN+ +K +KLE Q G+ +R+T +++++I
Sbjct: 510 IAINDNLQATSKKIKQTHEEVGEDLNIDTEKKLKLEKHQQHGWCFRVT-RIDSAILRNTG 568
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D+Y L TV+ GV F RL T + QY EY Q+ +++E++ I+ Y +LS
Sbjct: 569 DKYIELQTVKAGVFFTTKRLRTLSQQYLDYFAEYNAKQRELIKEILSITLTYQTVFLRLS 628
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG---------SLVLNQCRHPIVELQGG 537
VL+ DVL +F+ + AP +V+P + + + + L+ RHP++E+Q
Sbjct: 629 LVLSNIDVLSAFANVAIFAPTSFVKPKLHGLASSVDSPEFAQRRVKLSDARHPVLEVQDD 688
Query: 538 VSYIPNDVYF-KSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS--- 593
V++I NDV +G SF ++TGPNMGGKSTYIR +GV ++Q+G ++P +
Sbjct: 689 VNFIANDVELANTGGSSFAIITGPNMGGKSTYIRQVGVIALMSQVGSYIPASDENVPELP 748
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ D I +RVGA DSQ +G+STFM+EM ET++++ T NSL+IIDELGRGTST+DGFG+A
Sbjct: 749 IFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATINSLIIIDELGRGTSTYDGFGLA 808
Query: 654 CSIARELASHRQPFTLFATHFHEIALLS-RVIPTFRNVQV--------SALEQEDNLVLL 704
+I+ L + +Q FTLFATHFHE+ LS + +N+ V S E+ED++ L+
Sbjct: 809 WAISEHLITQKQCFTLFATHFHELTKLSEKHEGKVQNLHVVAHIEKNDSEAEKEDDITLM 868
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY 743
Y+V+PG KS+G+H A++ +P ++ A+ E ++
Sbjct: 869 YRVEPGISDKSFGIHVAELVKFPTKIVNMAKRKASELQH 907
>gi|242050756|ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [Sorghum bicolor]
gi|241926499|gb|EER99643.1| hypothetical protein SORBIDRAFT_02g038230 [Sorghum bicolor]
Length = 942
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 256/768 (33%), Positives = 404/768 (52%), Gaps = 68/768 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLND-NKNKIVTILDR 147
VG++ +D+ +K + E P+D ++N+E+ +V KECLL + + N + +
Sbjct: 160 VGLSFLDMTNRKLGLAEFPEDSRFTNVESALVALGCKECLLSEDCEKSIDLNPLRDAISN 219
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
V +T +KK +F DL QD+ R++R +++ LL + A L +L++Y EL
Sbjct: 220 CNVLLTVKKKADFKSRDLAQDLGRIIRGSVEPVRD--LLSQ--FDYALGPLGALLSYAEL 275
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR-CRTPQ 266
+ ++ N ++I + + Y+ + SA + +L++ + T SL G+++R C
Sbjct: 276 LADDTNYGNYTIEKYNLNCYMRLDSAAVRALNI--SERKTDVNKNFSLFGLMNRTCTVGM 333
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL +W+KQPL D++ I R V V + E R L + L+ + D+ L + +K
Sbjct: 334 GKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPELRQGLRQ-QLKRISDIDRLTHALRKK 392
Query: 327 KAGLKDCYRVYEGVSQLPKLISILE-------------------------------SLVQ 355
A L+ ++Y+ ++ + ILE SLV+
Sbjct: 393 SATLQPVVKLYQSCCRISYIKGILEQYNGQFSTLIRSKFLEPLEEWMAEDRFGRFSSLVE 452
Query: 356 NV----EASNLNTILSSLQSLKMMDRKD---AVMDKMKEYLESTARRLNLVADKTIKLEN 408
+ N +S L S + KD V + + TA L+L DK +KLE
Sbjct: 453 TTIDLGQLENGEYRISPLYSSDLGVLKDELSVVENHINNLHVDTASDLDLSVDKQLKLEK 512
Query: 409 SPQGFAYRIT----MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
P G +R++ K+ + Y I++T + GV+F +L + QYQA+ EY + Q
Sbjct: 513 GPLGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGVKFTSSKLKKLSDQYQALFAEYTSCQ 572
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ +V +V+ +S Y++ + VL++ DVL SF+ +T P PYVRP + G +VL
Sbjct: 573 KKVVGDVVRVSGSYSEVFENFAAVLSELDVLQSFADLATSCPVPYVRPDITVSDEGDIVL 632
Query: 525 NQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
RHP +E Q GV++IPND G+ F ++TGPNMGGKST+IR +GV+V +AQ+G F
Sbjct: 633 LGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQVGVNVLMAQVGSF 692
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VPCD A++SV D IF RVGA D Q G+STFM EM ETA+++K ++ SL+IIDELGRGT
Sbjct: 693 VPCDQASVSVRDCIFARVGAGDCQLHGVSTFMQEMLETASILKGASDKSLIIIDELGRGT 752
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLS--------RVIPT-FRNVQVSAL 695
ST+DGFG+A +I L + TLFATHFHE+ L+ RV N V A
Sbjct: 753 STYDGFGLAWAICEHLMEVTRAPTLFATHFHELTALAHKNDDEHQRVSNIGIANYHVGAH 812
Query: 696 --EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT---P 750
L +LY+V+PG+C +S+G+H A+ A +PE ++ A+ E E T T
Sbjct: 813 IDPSSRKLTMLYKVEPGACDQSFGIHVAEFANFPEAVVALAKSKAAELEDFSTTPTFSDD 872
Query: 751 SGDETNNREEEYFKT--VQEGEYQMFDFLQQCLSLS-KQKDTNRILHL 795
S DE ++ + F V G + FL+ +L + D ++I+ +
Sbjct: 873 SKDEVGSKRKRVFSPDDVTRGAARARLFLEDFAALPVDEMDRSKIVEM 920
>gi|50554795|ref|XP_504806.1| YALI0F00154p [Yarrowia lipolytica]
gi|49650676|emb|CAG77608.1| YALI0F00154p [Yarrowia lipolytica CLIB122]
Length = 887
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 238/698 (34%), Positives = 381/698 (54%), Gaps = 66/698 (9%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
+TVG+A VDL+ + E D++ SNLE++++Q KEC+ + +K+ +++
Sbjct: 144 DTVGLAFVDLNNHVLGVSEFEDNECMSNLESLLIQLDVKECIT-------SDDKVKAVIE 196
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R V T K + F+ ++ +++ L+ +L+ PE+ L A L LI YL
Sbjct: 197 RAGVSRTDAKSSWFNANEVESNLDNLLA---EKLQPTS--PELSLKNALGSLACLIKYLS 251
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
L ++ N F+I + S+Y+ + ++ + +LH++P ++ + SL G+L+ C+T
Sbjct: 252 LTSDASNHGAFTIKTHTLSQYMKLDASALKALHLMPSVKDSTKSS--SLYGLLNVCKTAT 309
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNN---TEARMNLHEYALRGLPDMQSLAMRI 323
G R LAQW+KQPL D I +RH V I ++ R NL +PD+ L +
Sbjct: 310 GSRTLAQWVKQPLMDKQEIEKRHEIVEIFTSSDLLESIRQNLST-----IPDLNRLTRKF 364
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILES----LVQNVEASNLNTILSSLQSLKMM---- 375
R+ A L+D RVY+ V+ LP + S L + L++ + L++I++ LQ + +
Sbjct: 365 MRQAASLEDVVRVYQMVATLPHIASGLRAAQSELLEETFLTQLDSIITGLQKFEELVEST 424
Query: 376 -------------------------DRKDAVMDKMKEYLESTARRLNLVADKTIKLENSP 410
R +A D+MK+ S + L + DK +K EN
Sbjct: 425 IDLNSIDSHEFMINPDMEEGLNDTKARLEACQDRMKDIFASVSDELGMEMDKKLKFENHH 484
Query: 411 -QGFAYRITMKLNNSID--DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSI 467
G+++R+T + + ++ L T++ G+ F + L + + ++ + +EY+ Q +
Sbjct: 485 VHGWSFRLTRTDASCLRGLSKFKELATLKAGIIFTTNELRSLSNEFTDLSQEYKKIQARL 544
Query: 468 VEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQC 527
+E+I I+ Y L + S VL Q DVL SF AS + Y+RP + +L
Sbjct: 545 AKEIIEIACSYCPLLERCSAVLGQLDVLTSF--ASVAIERNYIRPTVVDSDDRKCILTAS 602
Query: 528 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
RHP +E Q ++IPNDV+ F ++TGPNMGGKST+IR +GV V + QIGCFVPC
Sbjct: 603 RHPCLEAQD--TFIPNDVHLGQDSKKFLVITGPNMGGKSTFIRQVGVIVLMNQIGCFVPC 660
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A IS+ D I RVGA DSQ +G+STFM EM ET+ ++K T+ SL+IIDELGRGTST+
Sbjct: 661 DRAEISIFDCILARVGAGDSQLKGLSTFMSEMLETSAILKSATDKSLIIIDELGRGTSTY 720
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT-FRNVQVSAL--EQEDNLVLL 704
DGFG+A +I+ + F++FATHFHE+ L++ P N+ V+A E D++ LL
Sbjct: 721 DGFGLAWAISEHIVK-MNCFSMFATHFHELTELAKEHPDRVDNLHVAAHVGESSDDITLL 779
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
Y+V PG KSYG H A++ +P ++ A+ +E +
Sbjct: 780 YKVVPGVSSKSYGTHVAEVVKFPTKVVNMAKRKAQELD 817
>gi|67972282|dbj|BAE02483.1| unnamed protein product [Macaca fascicularis]
Length = 618
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/566 (38%), Positives = 329/566 (58%), Gaps = 41/566 (7%)
Query: 285 IVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP 344
I ER V V + E R L E LR PD+ LA + R+ A L+DCYR+Y+G++QLP
Sbjct: 41 IEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLP 100
Query: 345 KLISILES-------LVQNVEASNLNTILSSLQSLKMMDRKDAVMD-------------- 383
+I LE L+ V + L + S + M MD
Sbjct: 101 NVIQALEKHEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFD 160
Query: 384 ---------------KMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI-- 425
KM+ L S AR L L K IKL++S Q G+ +R+T K +
Sbjct: 161 PNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN 220
Query: 426 DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQL 485
+ ++ +D + GV+F + +L + N +Y + EYE Q +IV+E++ IS+GY + + L
Sbjct: 221 NKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTL 280
Query: 486 SDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDV 545
+DVLAQ D +VSF+ S AP PYVRP + G G ++L RH VE+Q +++IPND+
Sbjct: 281 NDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDI 340
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
YF+ + F+++TGPNMGGKSTYIR GV V +AQIGCFVPC+SA +S+VD I RVGA
Sbjct: 341 YFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAG 400
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
DSQ +G+STFM EM ETA++++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+
Sbjct: 401 DSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIG 460
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
F +FATHFHE+ L+ IPT N+ V+AL E+ L +LYQVK G C +S+G+H A++A
Sbjct: 461 AFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELAN 520
Query: 726 YPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQC--LSL 783
+P+ ++E A+ E E G + ++ + ++GE + +FL + +
Sbjct: 521 FPKHVIECAKQKALELEEFQYIGESQGYDMEPAAKKCYLEREQGEKIIQEFLSKVKQMPF 580
Query: 784 SKQKDTNRILHLQETQEPGIEEYQSF 809
++ + N + L++ + I + SF
Sbjct: 581 TEMSEENITIKLKQLKAEVIAKNNSF 606
>gi|412993592|emb|CCO14103.1| DNA mismatch repair protein msh-2 [Bathycoccus prasinos]
Length = 1006
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/723 (32%), Positives = 374/723 (51%), Gaps = 73/723 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY-------LNDNKNKI 141
+G+A + T+ E D++ LE+I+ Q + +E ++P E + + +I
Sbjct: 200 IGLAFFEYSTRTLRALEFSDEERLGQLESILAQINAREVIVPNEIDKASGGAMTADAKRI 259
Query: 142 VTILDRNKVCMTGRKKNE-FSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
++DR T + +E F +D+ D+ RL++ D+ + +L L A CL +
Sbjct: 260 ADVIDRCDAMRTAKANSEYFRTDDVEDDLKRLLKSGDNVQAHRNVLD---LPLAVQCLHA 316
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD------- 253
++ + ++ N+ N + + D +V + +A + +L+VLP G +++
Sbjct: 317 VMKFADIGNDAQNHGRCELELFDSGAHVRLDAAALKALNVLPSSGGGGDRSFGETAGKGS 376
Query: 254 ----SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
SL +L+RC +P G R+L +W+KQPL ++ I ERH V + R +L
Sbjct: 377 GGGFSLYNLLNRCTSPMGKRVLYRWLKQPLVSVEKISERHDVVETFSEESALRDSLRNAH 436
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE------------------ 351
L+ LPD++ LA ++ +KK L D ++Y+ S +P I LE
Sbjct: 437 LKSLPDVERLARKLEKKKTTLMDLCKLYQASSAIPHAIDCLERIPFSDETRKALFISKYI 496
Query: 352 -SLVQNVE-------------ASNLNTILSSLQSLKMMDRKDAVMDKMKEYLES------ 391
L + VE A +LN I D A++++ K E
Sbjct: 497 SPLKECVEEEKLGKFEALIEHAVDLNKIPDEYVISAEFDDTLALLEQQKISTEEEINVVW 556
Query: 392 --TARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSIDDR------YTILDTVRGGVRFQ 442
A L + DK +KLE N+ G+ +R+T K + + + IL+ + G +F
Sbjct: 557 QEAAEDLTMERDKQLKLEKNNQHGYFFRLTKKDETAARSKLSKSAQFQILEAKKDGSKFT 616
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+ +L + + I R YE Q+ +V+ V+ ++ + + S V+A+ DVL +F+ +
Sbjct: 617 NKKLRALSQKRLEIDRTYEAKQKHLVQRVLDVAVSFVDIFLKASSVMAELDVLCAFAEVA 676
Query: 503 TCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVS-YIPNDVYFKSGEVSFNLVTGPN 561
AP PYVRP M LVL RHP+VE+Q ++ N GE F ++TGPN
Sbjct: 677 QNAPTPYVRPQMTNADEKELVLLDSRHPLVEVQESCGEFVQNSCKMIKGESWFQIITGPN 736
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKST+IR +GV+V LAQ+G FVPC A I V D IF R+GA D Q RG+STFM EM E
Sbjct: 737 MGGKSTFIRQVGVNVLLAQVGSFVPCSKAIIPVRDAIFCRIGAGDFQLRGVSTFMAEMLE 796
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
+A++++ TE SLVIIDELGRGTST+DGFG+A IA LA+ + LFATHFHE+ L
Sbjct: 797 SASILRSATEKSLVIIDELGRGTSTYDGFGLAWGIAEHLANEVKAPCLFATHFHELTEL- 855
Query: 682 RVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMK 739
+ +N VSA + +LY ++ G+C +S+G+HCA+ +G+P + LE AR +
Sbjct: 856 KGETGVKNFHVSAKIDVASKKIAMLYALEEGACDQSFGIHCAEFSGFPAEALEDARKCAE 915
Query: 740 EYE 742
E E
Sbjct: 916 ELE 918
>gi|150866717|ref|XP_001386399.2| hypothetical protein PICST_68406 [Scheffersomyces stipitis CBS
6054]
gi|149387973|gb|ABN68370.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 999
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 250/794 (31%), Positives = 411/794 (51%), Gaps = 118/794 (14%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
VGV ++D + E D+D +SNLE++++Q KE +LP+ Y ++N K+ +
Sbjct: 156 VGVCVIDTSNSTIQVSEFEDNDLFSNLESLLLQLGVKEVVLPSNYSAKDENTESIKLFQV 215
Query: 145 LDR-NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN---------ARLLPEMCLTTA 194
LD+ + ++ K + F+ +D+ QD+ +LV ++ + + ++ + +
Sbjct: 216 LDKIGYLVVSSVKSSFFTTKDIEQDLRKLVSSENQKDDDDVNVDLLLASKGINTADFAHS 275
Query: 195 THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS------TS 248
C +LI YL+L++ +D N F+I + S Y+ + S+ M +L++ P S
Sbjct: 276 LACCNALIAYLQLLS-DDVQNSFTIEQYNLSSYMKLDSSTMKALNIFPSSNSGVSNALVK 334
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
+ S+ +L++CRT G RLL+QW+KQPL L I ER VN LV+ T R+ ++
Sbjct: 335 SSNISSIFELLNKCRTAAGSRLLSQWLKQPLTSLSMIEERLDLVNYLVDGTNFRVYANQE 394
Query: 309 ALRGLPDMQSLAMRI--------GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEAS 360
L +PD++ L +I G + L+D +Y+ V LP I + + ++ ++E
Sbjct: 395 FLSQVPDIRRLLKKISNGLSKSTGNENKKLEDIVVLYQLVLALPAFIDMSKMVIADIEEK 454
Query: 361 N------------LNTILSSLQSL------------------------------------ 372
+ L + SL+SL
Sbjct: 455 DSLPVANLIKKHWLEPVEKSLESLSKFQEMIETTIDLSPLESSSAYDQLHSDFNVRPEFD 514
Query: 373 ----KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMK----LNN 423
++ D+ A + ++K+ A LN+ DK +KLE Q G+ +R+T L N
Sbjct: 515 ESLIEINDKLQASLAEIKQLHIEVADDLNMELDKKLKLEKHIQHGWCFRVTRNDSTVLRN 574
Query: 424 SIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLN 483
+ ++Y+ L TV+ GV F RL + +Y +EY T Q+ +++E++ IS Y
Sbjct: 575 T-GNKYSQLQTVKAGVFFTTKRLTLLSQEYAEALQEYNTKQRELIKEILSISLSYQSVFM 633
Query: 484 QLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG---------SLVLNQCRHPIVEL 534
LS LA DVLVSF+ + AP + RP + P+ + L + RHP++E+
Sbjct: 634 NLSLTLAHLDVLVSFANVAIVAPTVFARPKLHPLSNDIDSDQFKNRKIKLREARHPVLEV 693
Query: 535 QGGVSYIPNDVYFKSGEVS----FNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC--- 587
Q +++I NDV+ + F ++TGPNMGGKSTYIR IGV +AQIG F+P
Sbjct: 694 QDDINFIANDVFLSNDACDKGKPFVIITGPNMGGKSTYIRQIGVIALMAQIGSFIPANED 753
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D + + D I +RVGA DSQ +G+STFM+EM ET++++ T+NSL+IIDELGRGTST+
Sbjct: 754 DFPELPIFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATQNSLIIIDELGRGTSTY 813
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALL-SRVIPTFRNVQVSAL-----EQEDNL 701
DGFG+A SI+ L + FTLFATHFHE+ L S+ N+ V A E +D++
Sbjct: 814 DGFGLAWSISEHLIKEKSCFTLFATHFHELTQLSSKYEDKVDNLHVVAHVENKDENDDDI 873
Query: 702 VLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR---------DLMKEYEYSLDTKTPSG 752
L+Y+V+PG KS+G+H A++ +P ++ A+ ++ +E ++ + KT
Sbjct: 874 TLMYRVEPGVSDKSFGIHVAELVKFPSKIINMAKRKASELQDMNVTEEDKFIQNKKTKCS 933
Query: 753 DETNNREEEYFKTV 766
E +R + KT+
Sbjct: 934 AEEIDRGVDTLKTI 947
>gi|384500813|gb|EIE91304.1| hypothetical protein RO3G_16015 [Rhizopus delemar RA 99-880]
Length = 862
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/699 (35%), Positives = 371/699 (53%), Gaps = 105/699 (15%)
Query: 108 DDDYYSNL---EAIIVQKSPKECLLPAEYLNDNKN-----KIVTILDRNKVCMTGRKKNE 159
D+ Y L ++ I+Q KECLL + + N+ KI IL R V +T RKK E
Sbjct: 156 DNKVYEKLIYVKSFIIQLGVKECLL---HTSGNEKDYEGIKIKGILARCNVVVTERKKGE 212
Query: 160 FSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSI 219
F +++ QD+NRLV + S +E + ++ N ++ +
Sbjct: 213 FDAKNIAQDLNRLVEGNLS--------------------------IETLQDDANFGKYVL 246
Query: 220 HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPL 279
D S+Y+ + + +++L+++P ++ SL G+L++C+T QG RL AQW+KQPL
Sbjct: 247 KHHDLSQYMRLDGSALAALNLMPTSNEAVNKS-TSLYGLLNKCKTAQGSRLFAQWLKQPL 305
Query: 280 KDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEG 339
+L+ I + R +L E L+ +PD+ LA R + A L+D RVY+
Sbjct: 306 LNLEEI--------------KLRQSLQEDHLKNIPDLHRLAKRFQKGTASLQDVVRVYQV 351
Query: 340 VSQLPKLISILESLV-QNVEASNL------------NTILSSLQSL-------------- 372
V +LP L++ LE+ V ++VE +NL + +L L+ L
Sbjct: 352 VIRLPGLLTCLENKVSEDVEKANLIDDLYTSKIRHLSGLLHKLEELVETTIDLDALENHE 411
Query: 373 ------------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRI-- 417
++ + + + +M E L L DK +K E +S G +R+
Sbjct: 412 YIIKAQFNDELQELRSQTNELDREMVEEYRRVGENLCLELDKKLKFERHSLYGHCFRVVG 471
Query: 418 ----TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIG 473
T N S +YT T + G F L ++++ I ++Y+ Q+ + EV+
Sbjct: 472 RSEYTRIRNKSEYIQYT---TQKSGTLFATRTLKELSSKHADISKKYDVKQRGLAREVVE 528
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE 533
I A Y +L L + + SF+ AS AP PYVRP M P+G G++ L RHP +E
Sbjct: 529 IVATYCPSLESLGVLKLKCS---SFAHASVMAPTPYVRPTMFPLGQGNVALEDARHPCLE 585
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+Q V++IPNDV E +VTGPNMGGKSTYIR +GV V +AQIGCFVPC SA++
Sbjct: 586 VQDYVTFIPNDVNLTRDESELQIVTGPNMGGKSTYIRQVGVIVLMAQIGCFVPCTSASLC 645
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
V D I RVGA DSQ +G+STFM EM ETAT++K T NSLVIIDELGRGTST+DG G+A
Sbjct: 646 VFDSILARVGAGDSQLKGVSTFMAEMLETATILKAATRNSLVIIDELGRGTSTYDGLGLA 705
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA-LEQEDNLVLLYQVKPGSC 712
+I+ + +H + F LFATHFHE+ L + + +N+ V+ + ++ LLY+V G
Sbjct: 706 WAISEYIGTHIRSFCLFATHFHELTTLCQTVKHVKNMHVAVHIGNSHDVTLLYKVNEGVG 765
Query: 713 VKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
KS+G+H A++A +PE ++E A+ E + + PS
Sbjct: 766 DKSFGIHVAELANFPESVVELAKRKADELDEESEEHKPS 804
>gi|299115252|emb|CBN74093.1| MutS protein homolog 2A [Ectocarpus siliculosus]
Length = 828
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 240/734 (32%), Positives = 389/734 (52%), Gaps = 81/734 (11%)
Query: 105 EIPDDDYYSNLEAIIVQKSPKECLLPAEY------LNDNKNKIVTILDRNKVCMTGRKKN 158
E D+D +SNL+ +++Q +P +CLL + + K++ ++R V + K
Sbjct: 61 EFLDNDQFSNLDTLMLQLAPGQCLLTLDAGAAEGKPRGDMAKVLAAMERLDVAVEDVKGG 120
Query: 159 EFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDN----- 213
+F +D+ + L+ D+ L L E L +A CL +L+ LE ED
Sbjct: 121 QFKTDDIAGRMKALL--GDASLAQHSLANEQPLGSA--CLAALMGRLE---REDKGYENE 173
Query: 214 --------MNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
M +++ K++ + SA +++ +LP T+ Y SL +L+RC+T
Sbjct: 174 EGEGESPEMPSYALVQGTLQKHLRLDSAAAAAVTLLPD--PTAPHQYGSLFDVLNRCKTK 231
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL +W++QPL D + I RH V +L + R +L + L+ PD+ +L ++ R
Sbjct: 232 MGSRLLERWLRQPLTDKEEIERRHDMVGLLKDEAGLRGSLQDGPLKACPDLDTLKTKMQR 291
Query: 326 KKAGLKDCYRVY-------------------------------------EGVSQLPKLIS 348
KKAGL + +++Y +G ++L S
Sbjct: 292 KKAGLMEVFKLYVFSRSVHTFGDVLSGHFGEDEGEEETETETLINDKFVKGFAKLADGFS 351
Query: 349 ILESLVQNVEASNL--NTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLN------LVA 400
LV++V + + +++S S ++ + ++ MD++KE +E +
Sbjct: 352 RFLQLVEHVLDMDALPDLVVNSSYSPELGELREE-MDQIKEEVEDLHQEARDGWCDFGEK 410
Query: 401 DKTIKLENSPQGFAYRIT-MKLNNSIDDRYTILDTV---RGGVRFQDDRLATANTQYQAI 456
DK + E+ +GF +R+T L + R ++T+ + GV F L ++Y++
Sbjct: 411 DKCLLDEDKQRGFFFRLTKANLEQELKRRRKGVETLAVLKNGVHFTTSELKKLGSRYKSC 470
Query: 457 QREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP 516
+ EYE Q +VE+ + +A Y + S ++++ D+LVSF+ + AP VRP MK
Sbjct: 471 RLEYEEKQSGLVEKAVETAATYLPLVESASALVSELDILVSFADVAALAPTELVRPTMKD 530
Query: 517 MGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
GTG L + CRHP +E Q +++IPND S SF +VTGPNMGGKSTYIR++G
Sbjct: 531 KGTGVLKVMGCRHPCLEWQDEMNFIPNDYDMSSDGASFVVVTGPNMGGKSTYIRTLGAVT 590
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+G FVPC+SA +SV D +F RVGA D+Q RG+STFM EM E + +I +++SL+I
Sbjct: 591 VMAQVGSFVPCESAEMSVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASKDSLII 650
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
IDELGRGTSTFDGFG+A SI+ + Q LFATHFHE+ ++ +N+ V+A
Sbjct: 651 IDELGRGTSTFDGFGLAWSISEHIVKTTQAPCLFATHFHEMTTMAEHDKRVKNMHVTAQA 710
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETN 756
+ED + +LY+V+ G C++S+G+H A MAG+P ++ +A+ E + +G ET
Sbjct: 711 KEDKITMLYEVREGPCLESFGIHVATMAGFPRAVIREAKRKAATLENFEEAMERTGGETG 770
Query: 757 NREEEYFKTVQEGE 770
E+ KT +GE
Sbjct: 771 ---EQRKKTKTDGE 781
>gi|213405331|ref|XP_002173437.1| DNA mismatch repair protein msh2 [Schizosaccharomyces japonicus
yFS275]
gi|212001484|gb|EEB07144.1| DNA mismatch repair protein msh2 [Schizosaccharomyces japonicus
yFS275]
Length = 995
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 264/815 (32%), Positives = 399/815 (48%), Gaps = 126/815 (15%)
Query: 74 VISEDKTLETVLTNT---------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSP 124
V +ED T +L T VGVA +D+ ++ + E D D Y+N E+++VQ
Sbjct: 131 VATEDSTSGILLAVTTRVRQDQRMVGVAFIDVSLRQIGVCEFVDSDSYANFESLLVQTGA 190
Query: 125 KECLLPAEYLNDNK---------NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRF 175
+E LL + N++ I + +TG + ++FS D+ ++R++
Sbjct: 191 REILLASAGAQTESQSSAAKMELNRLHNIGESAGALVTGVRMSDFSSRDVEVLLSRVLGK 250
Query: 176 DDSELKNARLLPEMCLTTATHCLR----SLINYLELMNNEDNMNQ-----------FSIH 220
S L ++ + + L+ SL+ + ED FS +
Sbjct: 251 PVSHATTPELSLQLAMASCAALLKYVGPSLVGSMSSTTEEDEAEDSGEQEKETSRTFSFY 310
Query: 221 SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLK 280
+ Y+ + +++L++ P G + ++ SL G+L+ CRT G R L +W+ QPL
Sbjct: 311 EHNLEHYMRLDVPAVAALNLFPAAGGNNNKSM-SLFGLLNHCRTAMGMRQLRRWLSQPLL 369
Query: 281 DLDAIVERHAAVNILVNNTEARMNL--HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
D DAI R V V + E R L + LR +PD+ L+ R+ R A L+D RVY+
Sbjct: 370 DADAINTRLDLVEAFVEDAEVRQLLMDDDRLLRCIPDVPRLSRRLIRGTASLEDVVRVYQ 429
Query: 339 GVSQLPKLISILES------------LVQNVEA-----SNLNTILSSLQSLKMMDRKDAV 381
LP + +L+ Q +E + L ++++ LK +D V
Sbjct: 430 MALALPYFVDVLKESSSPKKDLLNQLYTQRIEGYAGDLAKLIELVNTTIDLKALDAHRYV 489
Query: 382 ---------------MDKMKEYL----ESTARRLNLVADKTIKLENSP-QGFAYRITMKL 421
+D+++ + E L L +K + LE+ G+ R+T
Sbjct: 490 IKAEFDEELMELRQQLDELRRSIYKEHERAGDDLGLDTEKKLHLEHHHIYGWCLRLTRTE 549
Query: 422 NNSI---DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGY 478
+ RYT L T + GV F RL NT Y + R Y HQ + EV+ I+A Y
Sbjct: 550 AGCLRGKGSRYTELATQKNGVYFTTSRLHGFNTTYTDLHRSYTYHQNGLAREVVKIAATY 609
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK---------------------PM 517
L + ++LA DV+VSF+ AST AP PYVRP + P
Sbjct: 610 YAPLEDVGNLLAHLDVIVSFAHASTIAPIPYVRPNVHCDVTAASVADAASIEENEEGVPD 669
Query: 518 GTGS--------------------LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLV 557
T S LVL RHP +E+Q V++IPNDV + G+ ++
Sbjct: 670 STISETKFQSVPFRKILSRTPCTKLVLKASRHPCLEVQDDVNFIPNDVRLEHGKRQLLII 729
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNMGGKSTYIR +GV V +AQIGCFVPC+SA + +VD + RVGA DSQ +G+STFM
Sbjct: 730 TGPNMGGKSTYIRQVGVIVVMAQIGCFVPCESADLDIVDSVLARVGAGDSQLKGVSTFMA 789
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM ETAT+++ + SL+I+DELGRGTST DGFG+A +IA + F LFATHFHE+
Sbjct: 790 EMLETATILRSASPRSLIIVDELGRGTSTTDGFGLAWAIAEYIVKRIDCFCLFATHFHEL 849
Query: 678 ALLSRVIPTFRNVQVSALEQEDN---LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
++ P +N+ V+AL EDN + LYQV G+ +S+G+H A++A +P+ +++ A
Sbjct: 850 TKMAETTPVVQNLHVTALVSEDNTKDISFLYQVCNGASDRSFGIHVAELAQFPQKIIQMA 909
Query: 735 RDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEG 769
R +E E +T T + T N E K +EG
Sbjct: 910 RMKARELE---ETNTSN---TENEGPEQKKARKEG 938
>gi|448514859|ref|XP_003867187.1| Msh2 DNA mismatch repair factor [Candida orthopsilosis Co 90-125]
gi|380351526|emb|CCG21749.1| Msh2 DNA mismatch repair factor [Candida orthopsilosis]
Length = 894
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 244/707 (34%), Positives = 400/707 (56%), Gaps = 81/707 (11%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N+VGV I++ K Y+ E D++ YSNLE +++Q KE +LP N ++ K++ +++
Sbjct: 141 NSVGVCIIE--DSKIYLCEFEDNELYSNLEGLLLQFGIKEVVLP----NLSEKKLLQVIN 194
Query: 147 R--NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL---KNARLLPEMCLTTATHCLRSL 201
+ N V T + F+ +++ QD+ +L+ D+ ++ L E L+ + C +L
Sbjct: 195 KIGNVVVST---ISAFNTKNIEQDLVKLLEEDNIQMMFSSKGMKLTEYSLSLS--CCNAL 249
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
+ YLEL+ N+ FS+ D S Y+ + S+ + +L+V P+ STS +S+ +L++
Sbjct: 250 VAYLELLENDSK--HFSVDKYDLSAYMKLDSSTIKALNVFPEFKSTSI---NSIFELLNK 304
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
C+T G RLL+QW+KQPL +++AI ER + V +L+ + R+ + L +PD++ L
Sbjct: 305 CKTSGGSRLLSQWLKQPLTNVEAIEERQSLVQLLMEDASLRVAVQN-VLTQVPDIKRLLK 363
Query: 322 -------RIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------------ 350
+IG + L+D R+Y+ V LP LI +L
Sbjct: 364 KMTIAIGKIGNENKKLEDLVRLYQLVLVLPDLIEVLKDQGDLVIKYWLDPISKHHQALLK 423
Query: 351 -----ESLVQNVEASNLNTIL-------SSLQSLKMMDRKDAVMDKMKEYLESTARRLNL 398
E+ V S+LN+ +SL S+ +RK + ++++K+ A LN+
Sbjct: 424 FQELVETTVDLKGLSDLNSNFDIRPEFDASLVSIN--ERKQSSLEQIKQLHLQVADDLNM 481
Query: 399 VADKTIKLENSPQ-GFAYRITMKLNNSI----DDRYTILDTVRGGVRFQDDRLATANTQY 453
++K +KLE Q G+ R+T N+S+ + Y L TV+ GV F +L + Y
Sbjct: 482 DSEKKLKLEQHQQHGYCLRLTR--NDSVVLRNNKNYIELQTVKAGVYFTTAQLRKLSQVY 539
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPC 513
EY Q+ ++ EV+ IS Y + LS L+ DV+ SF+ + AP + +P
Sbjct: 540 SNSCDEYNIKQRELIREVLSISLTYQGVFSVLSLDLSHLDVITSFANVALLAPTSFTKPK 599
Query: 514 MKPMGTGS--LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
+ PM + + L+ RHP++E+Q V +IPNDV G FN++TGPNMGGKSTY++
Sbjct: 600 LIPMDSKERRISLHDSRHPLLEVQDHVDFIPNDVSM--GNKFFNIITGPNMGGKSTYLKQ 657
Query: 572 IGVSVFLAQIGCFVPCDS-ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
I + +AQ+G F+P +S A + V D I +RVGA DSQ +G+STFM+EM ET++++ T
Sbjct: 658 IATTGLMAQVGSFIPAESGAELPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATAT 717
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRN 689
NSL+IIDELGRGTST+DGFG+A SI+ L ++ F LFATHFHE+ L+ P + N
Sbjct: 718 SNSLLIIDELGRGTSTYDGFGLAWSISEHLIQTKKCFALFATHFHELNKLAEKYPHSVEN 777
Query: 690 VQVSA-LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
+ V A +E +D++ L+Y+++PG KS+G++ A+M +P ++ A+
Sbjct: 778 LHVVAYVENKDDITLMYKIEPGISSKSFGINVAEMVKFPPKIINMAK 824
>gi|448116378|ref|XP_004203022.1| Piso0_000618 [Millerozyma farinosa CBS 7064]
gi|359383890|emb|CCE78594.1| Piso0_000618 [Millerozyma farinosa CBS 7064]
Length = 995
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 249/767 (32%), Positives = 405/767 (52%), Gaps = 109/767 (14%)
Query: 74 VISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
VI+ K ++ VGV ++DL + E D++ +SNLE++I+Q KE +LP+ Y
Sbjct: 141 VIAAVKYIQQSGQKKVGVCMIDLSNNLMQLCEFEDNELFSNLESLILQTGIKEIVLPSNY 200
Query: 134 ----LNDNKNKIVTILDR-NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN------ 182
+ K+ +L++ + ++ K + F+ +D+ QD+++ + + EL N
Sbjct: 201 EPSETGSDNIKLFQVLNKIGNLVLSTAKSSLFTSKDIEQDLSKFIATSN-ELNNVEAVLA 259
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
++ + + +T+ C +L+NYL+L +++ F++ S Y+ + S+ M +L++
Sbjct: 260 SKGINSVEFSTSLSCCNALLNYLDLFSSDSA--SFTVEKYTLSAYMKLDSSAMKALNIFS 317
Query: 243 QQ------GSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILV 296
Q T + +S+ +L++C+T G RLL+QW+KQPL + + I ERH V +++
Sbjct: 318 SQLNNFGNAYTKGNSVNSIFDLLNKCKTAAGSRLLSQWLKQPLTNANDIQERHRLVELII 377
Query: 297 NNTEARMNLHEYALRGLPDMQSLAMRI--------GRKKAGLKDCYRVYEGVSQLPKLI- 347
+NT+ R+ L + LR +PD++ L +I G + L+D R+Y+ V LP LI
Sbjct: 378 DNTDIRVFLIQDWLRQVPDVKRLLKKITNGVNKSSGNENKKLEDVVRLYQLVLVLPNLIE 437
Query: 348 --------SILESLVQNVEASNLNTI-------------------LSSLQSLKMMDRKDA 380
+I E QNVE I LS L S D +A
Sbjct: 438 KVKETMDSNIDEDTRQNVEKHWFKPISERYEALLKFQELVETTIDLSPLDSSNTSDLLNA 497
Query: 381 VMDKMKEYLES---------------------TARRLNLVADKTIKLENSPQ-GFAYRIT 418
+ E+ +S + L + +K +KLE Q G+ +R+T
Sbjct: 498 DFNIKSEFDDSLTETNSNIQDISQTIKDCQYEVSEDLGMEVEKKLKLEKHQQHGWCFRVT 557
Query: 419 MK----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
L N+ ++Y L TV+ GV F L + +YQ + +Y + Q+ ++ E++ I
Sbjct: 558 RNDSSVLRNT-GNKYIELQTVKAGVYFTTKDLRSLAQKYQVLSDDYNSKQRELIREILSI 616
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG---------SLVLN 525
+ Y L+ LA DV+ SF+ + AP PY +P + P+ + L L
Sbjct: 617 TLTYHSVFINLALSLAHLDVITSFANVAIFAPIPYAKPVIHPLSSDVDSDEYRERRLKLK 676
Query: 526 QCRHPIVELQGGVSYIPNDVYF--KSGEV----SFNLVTGPNMGGKSTYIRSIGVSVFLA 579
+ RHP++E Q +S+I NDV S E +F ++TGPNMGGKSTYIR IGV +
Sbjct: 677 EARHPVLEAQDDISFISNDVNLANNSSEAENGKAFVIITGPNMGGKSTYIRQIGVIALMN 736
Query: 580 QIGCFVPCDSA----TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
QIG FVP A + V D I +RVGA DSQ +G+STFM+EM ET++++ + NSL+
Sbjct: 737 QIGSFVPASDADFTPEVPVFDAILSRVGAGDSQMKGLSTFMIEMLETSSILATASHNSLI 796
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS-RVIPTFRNVQVSA 694
IIDELGRGTST+DGFG+A SI+ L + ++ FTLFATHFHE+ LS + N+ V+A
Sbjct: 797 IIDELGRGTSTYDGFGLAWSISEHLITEKRCFTLFATHFHELTDLSAKYNDRVENLHVAA 856
Query: 695 -LEQED-----NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
+E ED ++ L+Y+V+PG KS+G+H A++ +PE ++ A+
Sbjct: 857 HVENEDKEGNNDITLMYKVEPGISDKSFGIHVAELVKFPEKIVNVAK 903
>gi|354547057|emb|CCE43790.1| hypothetical protein CPAR2_500160 [Candida parapsilosis]
Length = 890
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 243/705 (34%), Positives = 400/705 (56%), Gaps = 77/705 (10%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N+VGV I++ K + E D++ YSNLE +++Q KE +LP N + K++ +++
Sbjct: 140 NSVGVCIIE--DNKVDLCEFEDNELYSNLEGLLLQFGIKEVVLP----NLSDKKLLQVIN 193
Query: 147 R--NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL---KNARLLPEMCLTTATHCLRSL 201
+ N V T + F+ +++ QD+ +L+ D+ ++ L E L+ ++ C +L
Sbjct: 194 KISNIVVST---ISAFNTKNIEQDLVKLLEEDNLQMVFSSKGMKLTEYSLSLSS-C-NAL 248
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
I YLEL+ N+ F+I+ D S Y+ + S+ + +L+V P+ STS +S+ +L++
Sbjct: 249 IVYLELLENDSK--NFTINKYDLSAYMRLDSSTIKALNVFPEFKSTSI---NSIFELLNK 303
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
+TP G RLL+QW+KQPL ++DAI ER A V +L+ + R+ + L +PD++ L
Sbjct: 304 SKTPGGSRLLSQWLKQPLTNVDAIEERQALVQLLMEDASLRVAVQN-VLTQVPDIKRLLK 362
Query: 322 R-------IGRKKAGLKDCYRVYEGVSQLPKLISIL------------------------ 350
+ IG + L+D R+Y+ V LP+L+ +L
Sbjct: 363 KMSISIGKIGNENKKLEDLVRLYQLVLVLPELVDVLKGRDDLVTKYWLDPISKHHQLLLK 422
Query: 351 -ESLVQN-VEASNLNTILSSL--------QSLKMMDRKDAVMDKMKEYLESTARRLNLVA 400
+ LV+ V+ LN + S+ + + +RK + + ++K+ A LN+ +
Sbjct: 423 FQELVETTVDLKGLNDLHSNFDIRPEFDASLVSINERKQSSLKQIKQLHLQIADNLNMDS 482
Query: 401 DKTIKLENSPQ-GFAYRITMKLNNSI----DDRYTILDTVRGGVRFQDDRLATANTQYQA 455
+K +KLE Q G+ R+T N+S+ + Y L TV+ GV F ++ + Y
Sbjct: 483 EKKLKLEQHQQHGYCLRLTR--NDSVVLRNNKNYIELQTVKAGVYFTTAQMRKLSQVYAN 540
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
EY Q+ ++ EV+ IS Y + LS L+ DV+ SF+ + AP + +P +
Sbjct: 541 SCDEYNIKQRELIREVLSISLTYQGVFSALSLDLSHLDVIASFANVALLAPTTFTKPKLI 600
Query: 516 PMGTGS--LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
PM + LN RHP++E+Q V +IPNDV G+ FN++TGPNMGGKSTY++ I
Sbjct: 601 PMHAKERRIKLNDSRHPLLEVQDDVDFIPNDVSM--GDKFFNIITGPNMGGKSTYLKQIA 658
Query: 574 VSVFLAQIGCFVPCD-SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
+ +AQ+G F+P + A + V D I +RVGA DSQ +G+STFM+EM ET++++ T N
Sbjct: 659 TTGLMAQVGSFIPAEPGAELPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATSN 718
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQ 691
SL+IIDELGRGTST+DGFG+A SI+ L H++ F LFATHFHE+ L+ P + N+
Sbjct: 719 SLLIIDELGRGTSTYDGFGLAWSISEHLIQHKKCFALFATHFHELNKLAEKYPNSVENLH 778
Query: 692 VSA-LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
V A +E +D++ L+Y+++PG KS+G++ A+M +P ++ A+
Sbjct: 779 VVAYVENKDDITLMYKIEPGISSKSFGINVAEMVKFPTKIINMAK 823
>gi|401883696|gb|EJT47891.1| DNA mismatch repair protein MSH2 [Trichosporon asahii var. asahii
CBS 2479]
Length = 672
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/600 (35%), Positives = 334/600 (55%), Gaps = 57/600 (9%)
Query: 197 CLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLL 256
L +LI+YLELM + QF + D S+++ + ++ + +L+++PQ SL
Sbjct: 3 ALAALISYLELMMDTPMHGQFHLRRHDLSQFMKLDASAVKALNLMPQP-ELGGNKNMSLY 61
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+L+ C+T QG RLL +W+KQPL + AI R V + VN++ R L + L+ +PD
Sbjct: 62 GLLNHCKTSQGQRLLGRWLKQPLVNRHAIQRRQDMVEMFVNDSVRRRTLQDEYLKRMPDF 121
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-----------------EA 359
+ R R AGL+D RVY+ V+ LPK+I L+ L + +A
Sbjct: 122 HRICKRFHRGGAGLEDLVRVYQAVAVLPKIIDSLDDLAKEEGMQGQVLEEDFIVPLREKA 181
Query: 360 SNLN-------------------------TILSSLQSLKMMDRKDAVMDKMKEYLESTAR 394
+ L T+ LQ + D A D + E R
Sbjct: 182 TQLEQYSALIEESIDLEELEHNHHYHLQPTLDPELQQFR--DSLLATRDGLDEEHRRVGR 239
Query: 395 RLNLVADKTIKLENSP-QGFAYRITMKLNNSI-DDRYTI-LDTVRGGVRFQDDRLATANT 451
+L L +K + LEN+ +++R+T N+I +++ I L + G F ++L +
Sbjct: 240 KLGLDIEKKLHLENNQVYNYSFRVTKAEANAIRQNQWCIELAVQKAGTIFTTEKLKELSA 299
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
+Y +Q EYE Q+ +++EV+G+++ Y L +L +A DVLVSF+ S AP PYV+
Sbjct: 300 EYLRLQEEYEKKQKYLIKEVVGVASSYAPLLEELDGTIAALDVLVSFAHVSANAPIPYVK 359
Query: 512 PCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
P + G +++ RHP +E+Q +++I ND + G F ++TGPNMGGKSTYIR
Sbjct: 360 PTVAEKGGSDVIVRGARHPCLEVQDDINFIANDHEMRRGNSEFAILTGPNMGGKSTYIRQ 419
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
+GV LAQ+GCFVP DSA + + D + RVGA DSQ +G+STFM EM ETAT+++ T
Sbjct: 420 LGVIALLAQLGCFVPADSAKLPIFDCVLARVGAGDSQLKGVSTFMAEMLETATILRSATR 479
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
+SL+IIDELGRGTST+DGFG+A +I+ +A + + F LFATHFHE+ ++ + +N+Q
Sbjct: 480 DSLIIIDELGRGTSTYDGFGLAWAISEHIAKNIRAFCLFATHFHELTAMANQMEWVKNLQ 539
Query: 692 VSALEQ---------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V A Q + + LLYQV G +S+G+H A++A +P+ +++ A+ E E
Sbjct: 540 VRAEVQPAPAGKSISDRQITLLYQVIEGHSDQSFGIHVAELARFPDAVVKLAKRKADELE 599
>gi|167966182|gb|ACA13172.1| mismatch repair MutS-like protein [Vermamoeba vermiformis]
Length = 677
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/615 (34%), Positives = 351/615 (57%), Gaps = 48/615 (7%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL-LPAEYLNDNKNKIVTILD 146
+G A +D+ KK + ++ D+D +NLE++I+Q KEC +P + + + K+ T+ +
Sbjct: 64 VIGAAFIDVILKKIGVAQLLDNDQLTNLESLIMQVGAKECYSMPLDEKDLDCQKMKTVYE 123
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLV---RFDDSELKNARLLPEMCLTTATHCLRSLIN 203
+ + +T K+N+F+ +D+ QD+ RL+ RF+ ++ L+ + +A CL +N
Sbjct: 124 KCDLVVTEMKRNDFASQDIEQDLRRLLGEKRFNTIKMS---LIDDKHAMSAVSCL---LN 177
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
L LM +E N + ++ D +Y+ + +A + +L+VLP +L G+L+RC+
Sbjct: 178 GLALMGDETNFGAYKMYRFDLDQYMRLDTAAIYALNVLPN--PKEPNQGQNLYGLLNRCK 235
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G R L QW+KQPL DL+ I RH V I + L LR +PD++ L+ ++
Sbjct: 236 TPMGSRKLLQWLKQPLLDLEMINNRHDVVQIFYEDENLCKELRTKCLRRIPDLERLSKKV 295
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISIL-----------ESLVQNVEA--SNLNTILSSLQ 370
R +A L+DC +Y+ + +LP++ L E + +E S ++
Sbjct: 296 QRNRASLQDCVVIYQFIQRLPEISDTLKNSLGDQKLINEKFIAPLERDLSGYENLIEETI 355
Query: 371 SLKMMDRKDAVM-----DKMKEYLESTAR------------RLNLVADKTIKLENSP-QG 412
L+M+D + V+ D++KE + + ++ + + + K++N G
Sbjct: 356 DLEMVDEGEYVISASFDDELKEISDKKKKVVKNIKGREDEVKIQIGSPSSFKIDNDKTHG 415
Query: 413 FAYRITMKLNNSIDDR-----YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSI 467
+ YRI+ K SI + +TIL + ++FQD + + +Y + Y +
Sbjct: 416 WFYRISRKDEKSIGGKKNEKIFTILQPISKVLKFQDAEMKALSEKYTELSASYNKKSADL 475
Query: 468 VEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQC 527
V E++ I + Y + +++A+ DV SF+ + AP Y+RP MK +GTG++VL +
Sbjct: 476 VREIMLIVSSYLPVFEEAHELIAELDVYTSFADVAYTAPYSYIRPDMKELGTGNVVLKKA 535
Query: 528 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
RHP++E+Q +++IPND GE SF ++TGPNMGGKST+IR +GV V +AQIG FVPC
Sbjct: 536 RHPVLEIQPDMTFIPNDTDLVRGESSFQIITGPNMGGKSTFIRQVGVIVLMAQIGSFVPC 595
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
DSA IS+ D I RVGA DSQ RG+STFM EM ET+T++ T NSL+IIDELGRGTST+
Sbjct: 596 DSAEISICDAILARVGAGDSQLRGVSTFMAEMLETSTILHTATPNSLIIIDELGRGTSTY 655
Query: 648 DGFGMACSIARELAS 662
DGFG+A +I+ +++
Sbjct: 656 DGFGLAWAISEFIST 670
>gi|406700021|gb|EKD03208.1| DNA mismatch repair protein MSH2 [Trichosporon asahii var. asahii
CBS 8904]
Length = 672
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/600 (35%), Positives = 333/600 (55%), Gaps = 57/600 (9%)
Query: 197 CLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLL 256
L +LI+YLELM + QF + D S+++ + ++ + +L+++PQ SL
Sbjct: 3 ALAALISYLELMMDTPMHGQFHLRRHDLSQFMKLDASAVKALNLMPQP-ELGGNKNMSLY 61
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+L+ C+T QG RLL +W+KQPL + AI R V + VN++ R L + L+ +PD
Sbjct: 62 GLLNHCKTSQGQRLLGRWLKQPLVNRHAIQRRQDMVEMFVNDSVRRRTLQDEYLKRMPDF 121
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV-----------------EA 359
+ R R AGL+D RVY+ V+ LPK+I L+ L + +A
Sbjct: 122 HRICKRFHRGGAGLEDLVRVYQAVAVLPKIIDSLDDLAKEEGMHGQVLEEDFIVPLREKA 181
Query: 360 SNLN-------------------------TILSSLQSLKMMDRKDAVMDKMKEYLESTAR 394
+ L T+ LQ + D A D + E R
Sbjct: 182 TQLEQYSALIEESIDLEELEHNHHYHLQPTLDPELQQFR--DSLLATRDGLDEEHRRVGR 239
Query: 395 RLNLVADKTIKLENSP-QGFAYRITMKLNNSI-DDRYTI-LDTVRGGVRFQDDRLATANT 451
+L L +K + LEN+ +++R+T N+I + + I L + G F ++L +
Sbjct: 240 KLGLDIEKKLHLENNQVYNYSFRVTKAEANAIRQNPWCIELAVQKAGTIFTTEKLKELSA 299
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
+Y +Q EYE Q+ +++EV+G+++ Y L +L +A DVLVSF+ S AP PYV+
Sbjct: 300 EYLRLQEEYEKKQKYLIKEVVGVASSYAPLLEELDGTIAALDVLVSFAHVSANAPIPYVK 359
Query: 512 PCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
P + G +++ RHP +E+Q +++I ND + G F ++TGPNMGGKSTYIR
Sbjct: 360 PTVAEKGGSDVIVRGARHPCLEVQDDINFIANDHEMRRGNSEFAILTGPNMGGKSTYIRQ 419
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
+GV LAQ+GCFVP DSA + + D + RVGA DSQ +G+STFM EM ETAT+++ T
Sbjct: 420 LGVIALLAQLGCFVPADSAKLPIFDCVLARVGAGDSQLKGVSTFMAEMLETATILRSATR 479
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
+SL+IIDELGRGTST+DGFG+A +I+ +A + + F LFATHFHE+ ++ + +N+Q
Sbjct: 480 DSLIIIDELGRGTSTYDGFGLAWAISEHIAKNIRAFCLFATHFHELTAMANQMEWVKNLQ 539
Query: 692 VSALEQ---------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V A Q + + LLYQV G +S+G+H A++A +P+ +++ A+ E E
Sbjct: 540 VRAEVQPAPAGKSISDRQITLLYQVIEGHSDQSFGIHVAELARFPDAVVKLAKRKADELE 599
>gi|312072119|ref|XP_003138920.1| MutS domain III family protein [Loa loa]
gi|307765917|gb|EFO25151.1| MutS domain III family protein [Loa loa]
Length = 879
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 275/859 (32%), Positives = 440/859 (51%), Gaps = 117/859 (13%)
Query: 11 KSKTTIRFFNRVEFYCVHGEDAELIQR---------------KSNVVYLVKTMGQKDKTL 55
K+ T+ F R EFY + +DA I ++ ++Y V Q + +
Sbjct: 15 KASGTVVIFERNEFYACYEDDAIFIANSIFCSEVGLRRCRIGETELMYHVLNNAQYLRVV 74
Query: 56 ETVLV-------------------NKSNLSC---FSHILCVISEDKTLETV--LTNTVG- 90
V++ K +L C F I+ +E L TV LT T G
Sbjct: 75 HDVILVQHYRVEVYAANDGQWELKAKGSLGCLNDFEEIVGDSAELYELTTVAALTVTEGH 134
Query: 91 ------VAIVDLDTK--KFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIV 142
V++V + + + + E D +++ NLE + P+ECLL ++ + + V
Sbjct: 135 DSSECLVSVVSCNVREMQLTIAEFLDTEHFVNLEKCLAALVPRECLLVSDKMGISS---V 191
Query: 143 TILDRNKVCMTGRKKN-------EFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTAT 195
++ N T KK +FSE+ N + D + K+ RL
Sbjct: 192 SLCGENNQLNTALKKAGIRKELFQFSEQLPTTLSNHITEMIDPKYKDIRLS-----RAQK 246
Query: 196 HCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--QQGSTSAQTYD 253
+CL LI +L L ++ +F + + + Y++++SA + +L + Q+
Sbjct: 247 NCLVGLIQHLHLNDDGVMSGKFQLRNYKSAGYMYLNSAAVKALELFAACQEDEDLLDDVG 306
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SL +L++CRTPQG RLL W+++PL D+ I ER V LVNN+ R LH+ LR +
Sbjct: 307 SLYELLNKCRTPQGQRLLRDWIRRPLHDIRKINERLDVVEALVNNSLCRAILHDDILRRI 366
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVE--ASNLNTI------ 365
PD+ ++ ++ +KKAGL++CYR+Y+ + L + +L+ L + AS++N +
Sbjct: 367 PDITTITRKLLQKKAGLQECYRLYQIIRLLKRFHQVLDELHASCGSLASSVNDLCLEPLA 426
Query: 366 LSSLQSLKMMDRKDAVMD--------------KMKEYLESTARRLNLVADK--------- 402
L+ LQ K M ++ +D + E L + A R++ + K
Sbjct: 427 LAQLQFEKFMALIESTVDVAYFKENGLYRILPNIDENLLAVAERMDEIETKCNALLKKVC 486
Query: 403 -----TIKLENSPQ-GFAYRITMKLNNSI-DDRYTILDTVRG-GVRFQDDRLATANTQYQ 454
+KLEN+ GF +R+T+K SI IL+T +G GV F D L N +Y
Sbjct: 487 SGITEAVKLENTEHHGFHFRVTLKAEKSIRQSDMRILETSKGSGVHFTCDDLDILNREYL 546
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
+ YE Q S ++ V+ +GY T +LS+ +A D LV+ SI ++ +P +VRP +
Sbjct: 547 KLSSHYEAIQSSFIDMVVETCSGYVSTFCELSETVAIIDTLVALSILASGSPFCFVRPQI 606
Query: 515 KPMGTGSLVLNQCRHPIVELQGGVS-YIPNDVYF---KSGEVSFNLVTGPNMGGKSTYIR 570
L L +CRHP++E S +I NDV + F ++TG NMGGKSTY+R
Sbjct: 607 LDEDKQILELRKCRHPVMEANPNSSQFICNDVILGREQGDGAMFLVLTGANMGGKSTYLR 666
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
+SV LAQIG FVPC+SA S++D I TR+G+ D Q +G+STFM EM + A++++ T
Sbjct: 667 CCALSVLLAQIGSFVPCESARFSLIDGIHTRIGSCDYQCKGVSTFMAEMNDCASILESAT 726
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT-FRN 689
+SLVI+DELGRGTST+DGFG+A +IA ++ S + F ++ATH+HE+ LSRV P +N
Sbjct: 727 CHSLVIVDELGRGTSTYDGFGLAWAIAEDIVSRVKCFCIYATHYHELTRLSRVYPKQLKN 786
Query: 690 V-QVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK 748
V S +++ L+LLY++ PG +S+G++ KM G P +L+ A D+++ E + D+K
Sbjct: 787 VCTASQIDENGQLILLYKIIPGVAGRSFGLNIGKMIGLPNSVLQTASDMLERLE-ARDSK 845
Query: 749 TPSGDETNNREEEYFKTVQ 767
S EEE +K +
Sbjct: 846 LSSD------EEELYKKIH 858
>gi|294655493|ref|XP_002770136.1| DEHA2B15818p [Debaryomyces hansenii CBS767]
gi|199430000|emb|CAR65505.1| DEHA2B15818p [Debaryomyces hansenii CBS767]
Length = 999
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 246/766 (32%), Positives = 397/766 (51%), Gaps = 114/766 (14%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+G+ ++DL + E D+D +SNLE++++Q KE +LP+ Y ++N K+ +
Sbjct: 156 IGICLIDLSNNNIQVSEFDDNDLFSNLESLLLQLGVKEVILPSNYDPQDENNEVIKLYQV 215
Query: 145 LDR-NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN------ARLLPEMCLTTATHC 197
LD+ + ++ K + F+ +D+ QD+ + + + E N ++ + + + + C
Sbjct: 216 LDKIGGIVISSVKSSLFTNKDIEQDLGKFITTTN-EANNIEVVLGSKGISSIEYSLSFSC 274
Query: 198 LRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS------AQT 251
+L++YL+L E F+I + S ++ + S+ M +L++ P Q S+S +
Sbjct: 275 CNALLHYLDLFTQESP--NFTIDKYNLSSFMKLDSSTMKALNIFPTQSSSSNNLITKSSN 332
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
S+ +L++C+T G RLL+QW+KQPL +L I ERH VN L+ +T R+ L + L
Sbjct: 333 VTSIFELLNKCKTSVGSRLLSQWLKQPLTNLVEINERHLLVNHLMEDTNLRVFLSQDWLP 392
Query: 312 GLPDMQSLAMRI--------GRKKAGLKDCYRVYEGVSQLPKLISIL------------- 350
+PD++ L +I G + L+D R+Y+ V LP+LI L
Sbjct: 393 QIPDVKRLLKKISNGIKKTVGNENKKLEDVIRLYQLVLVLPQLIDHLSNIVGEENNGDDV 452
Query: 351 ----------------ESLVQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLES-TA 393
ESL++ E LS L+S D + + E+ ES A
Sbjct: 453 KLLIKKYWLDPVSKNYESLIKYQELVETTIDLSPLESSSAHDLLNTDFNIKPEFDESLIA 512
Query: 394 RRLNLVAD----KTIKLENSP-----------------QGFAYRITMK----LNNSIDDR 428
NL A K +E S G+ +R+T L N+ +
Sbjct: 513 INDNLQATLSNIKNCHIEVSEDLGIELEKKLKLEKHQQHGWCFRVTRNDSSVLRNT-GNN 571
Query: 429 YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDV 488
Y L TV+ GV F L + + +YQ EY + Q+ +++E++ I++ Y LS
Sbjct: 572 YIELQTVKAGVFFTSKSLRSLSEKYQEFSGEYNSKQRELIKEILSITSTYQSVFTSLSLT 631
Query: 489 LAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG---------SLVLNQCRHPIVELQGGVS 539
L DVL SF+ + AP PYV+P + P+ + + L + RHP++E+Q ++
Sbjct: 632 LGHLDVLASFANVAIFAPIPYVKPMLHPLSSSIESDEHKQRKIKLEEARHPVLEVQDDIN 691
Query: 540 YIPNDVYFKSGEVS-------FNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC--DSA 590
+I NDVY + F ++TGPNMGGKSTYIR +GV ++Q+G FVP DS+
Sbjct: 692 FIANDVYLSTPNAEADSKGKPFVIITGPNMGGKSTYIRQVGVIALMSQVGSFVPASEDSS 751
Query: 591 T--ISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
I + D I +RVGA DSQ +G+STFM+EM ET++++ T NSL+I+DELGRGTST+D
Sbjct: 752 APEIPIFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATHNSLIIVDELGRGTSTYD 811
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIA-LLSRVIPTFRNVQVSAL---------EQE 698
GFG+A SI+ L S + FTLFATHFHE+ L ++ N+ V A E E
Sbjct: 812 GFGLAWSISEHLISEKHCFTLFATHFHELTELATKYNDKVSNLHVVAHVEKNDEQNDENE 871
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
D++ L+Y+V+PG KS+G+H A++ +P ++ A+ E + S
Sbjct: 872 DDITLMYKVEPGISDKSFGIHVAELVKFPNKIVNMAKRKASELQNS 917
>gi|170589733|ref|XP_001899628.1| MutS domain III family protein [Brugia malayi]
gi|158593841|gb|EDP32436.1| MutS domain III family protein [Brugia malayi]
Length = 877
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 268/834 (32%), Positives = 425/834 (50%), Gaps = 112/834 (13%)
Query: 11 KSKTTIRFFNRVEFYCVHGEDAELI----------------------QRKSNVVYLVKTM 48
K++ T+ F R EFY + +DA I Q ++ ++Y V
Sbjct: 15 KARGTVAIFERSEFYSCYDDDALFIANDVFCSEVGLRRCKIGEHIASQGETELMYHVLNN 74
Query: 49 GQKDKTLETVLVNK-----SNLSC---FSHILCVISEDKTLETVLTNTVG---------- 90
Q + + ++ K +L C F I+ +E L TV TV
Sbjct: 75 TQYLRVVHDAILVKHYRVEGSLGCLNDFEDIVGNSAELCELTTVAALTVTERHDSTEVPS 134
Query: 91 ---VAIVDLDTK--KFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL--------NDN 137
V++V + + + + E D D++ NLE + P+ECLL + ++N
Sbjct: 135 FYVVSVVSCNVREMQLTIAEFLDTDHFVNLEKCLAALVPRECLLVPIKMGISCVTLSSEN 194
Query: 138 KNKIVTILDRNKVCMTGRKKN--EFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTAT 195
++ +L + G KK +FSE +++ D + K+ L
Sbjct: 195 SGQLHAVLKK-----AGIKKELFQFSERLPTALSDQIAEMIDPKYKDVHLS-----RAQK 244
Query: 196 HCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP--QQGSTSAQTYD 253
C LI +L L N +F + + + Y++++SA + +L + Q+
Sbjct: 245 ACFMGLIQHLNLNNIGMKSGKFQLRNYKSAGYMYLNSATIKALELFAAFQEDEDLMNDVG 304
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SL +L++CRTPQG RLL W+++PL D+ I ER V VNN R LH+ LR +
Sbjct: 305 SLYDLLNKCRTPQGQRLLRDWIRRPLHDIRKINERLDVVEAFVNNFSCRTILHDDILRRI 364
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVE--ASNLNTI------ 365
PD+ + ++ +KKAGL++CYR+Y+ V L + +L+ L + A ++N +
Sbjct: 365 PDITIITRKLVQKKAGLQECYRLYQVVRLLKRFHQVLDELHASCGPLAPSVNDLCLEPLA 424
Query: 366 LSSLQSLKMMDRKDAVMD--------------KMKEYLESTARRLNLVADK--------- 402
L+ LQ K M + +D + E L + A R++ + K
Sbjct: 425 LAQLQFEKFMALIENTVDLAYLKEKGSYRILPSIDENLLANAERIHKIEKKCKAVLKQLC 484
Query: 403 -----TIKLENSPQ-GFAYRITMKLNNSIDD-RYTILDTVRG-GVRFQDDRLATANTQYQ 454
T+KL+ + GF +R+T+K SI IL+T +G GVRF L T N +Y
Sbjct: 485 SGITETVKLDKTEHHGFHFRVTLKAERSIRQLGMKILETSKGSGVRFTCKDLDTLNREYL 544
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
+ YE Q S V V+ IS+GY T +LS +A D LV+ SI ++ +P YVRP +
Sbjct: 545 KLASCYEAIQSSFVNMVVDISSGYASTFCELSGAVATIDTLVALSILASRSPSGYVRPQI 604
Query: 515 KPMGTGSLVLNQCRHPIVELQ-GGVSYIPNDVYFKS---GEVSFNLVTGPNMGGKSTYIR 570
L L +CRHP++E +I NDV S G+ F ++TG NMGGKSTY+R
Sbjct: 605 LDEDKQVLELKKCRHPVMEANPNSPQFISNDVILGSEQGGDAMFLMLTGANMGGKSTYLR 664
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
+SV LAQ+G FVPC+SA S++D I TR+G+ D Q +G+STFM EM + A++++ T
Sbjct: 665 CCAISVLLAQMGSFVPCESARFSLIDGIHTRIGSCDYQCKGVSTFMAEMNDCASILESAT 724
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT-FRN 689
+SLVI+DELGRGTST+DGFG+A +IA ++ S + F ++ATH+H++A LSRV P ++
Sbjct: 725 CHSLVIVDELGRGTSTYDGFGLAWAIAEDIVSRVKCFCIYATHYHDLAGLSRVYPKQLKS 784
Query: 690 V-QVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V S +++ L+LLY++ PG +S+G++ KM G PE++L+ A D+++ E
Sbjct: 785 VCTASQVDENGQLILLYKIIPGVAGRSFGLNIGKMVGLPENVLQTASDMLESLE 838
>gi|448118917|ref|XP_004203603.1| Piso0_000618 [Millerozyma farinosa CBS 7064]
gi|359384471|emb|CCE78006.1| Piso0_000618 [Millerozyma farinosa CBS 7064]
Length = 995
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 239/761 (31%), Positives = 396/761 (52%), Gaps = 109/761 (14%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY----LNDNKNKIVTI 144
VGV ++DL + E D++ +SNLE++I+Q KE +LP+ Y + K+ +
Sbjct: 156 VGVCMIDLSNNLMQLCEFEDNELFSNLESLILQTGIKEIVLPSNYEPSETGSDNIKLFQV 215
Query: 145 LDR-NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN------ARLLPEMCLTTATHC 197
LD+ + ++ K + F+ +D+ QD+++ + + EL N ++ + + +T+ C
Sbjct: 216 LDKIGNLVLSTAKSSLFTSKDIEQDLSKFIATSN-ELNNVEAVLASKGINSVEFSTSLSC 274
Query: 198 LRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ------GSTSAQT 251
+L+NYL+L +++ F++ S Y+ + S+ M +L++ Q T +
Sbjct: 275 CNALLNYLDLFSSDSA--SFTVEKYTLSAYMKLDSSAMKALNIFSSQLNNFGNAYTKGNS 332
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
+S+ +L++C+T G RLL+QW+KQPL + + I ERH V ++++NT+ R+ L + LR
Sbjct: 333 VNSIFDLLNKCKTAAGSRLLSQWLKQPLTNANDIQERHRLVELIIDNTDTRVFLIQDWLR 392
Query: 312 GLPDMQSLAMRI--------GRKKAGLKDCYRVYEGVSQLPKLISILESLV--------- 354
+PD++ L +I G + L+D R+Y+ + LP LI L+ V
Sbjct: 393 QVPDVKRLLKKITNGVSKSSGNENKKLEDVVRLYQLILILPNLIEKLKETVDSNIDDQTR 452
Query: 355 QNVEASNLNTI-------------------LSSLQSLKMMDRKDA--------------- 380
NVE I LS L S D +A
Sbjct: 453 HNVEKHWFKPITERYESLLKFQELVETTIDLSPLDSSNASDLLNADFNIKSEFDDSLTET 512
Query: 381 ------VMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMK----LNNSIDDRY 429
+ K+K+ + L + +K +KLE Q G+ +R+T L N+ ++Y
Sbjct: 513 NSNIQDISQKIKDCQYEVSEDLEMEVEKKLKLEKHQQHGWCFRVTRNDSSVLRNT-GNKY 571
Query: 430 TILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVL 489
L TV+ GV F L + +YQ + +Y + Q+ ++ E++ I+ Y L+ L
Sbjct: 572 IELQTVKAGVYFTTKELRSLAQKYQELSDDYNSKQRELIREILSITLTYHSVFINLALSL 631
Query: 490 AQFDVLVSFSIASTCAPKPYVRPCMKPMGTG---------SLVLNQCRHPIVELQGGVSY 540
A DV+ SF+ + AP PY +P + P+ + L L + RHP++E Q +S+
Sbjct: 632 AHLDVITSFANVAIFAPIPYAKPIIHPLSSDVDSDEYRERRLRLKEARHPVLEAQDDISF 691
Query: 541 IPNDVYFKSGEV------SFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSAT--- 591
I NDV + +F ++TGPNMGGKSTYIR IG + QIG F+P A
Sbjct: 692 ISNDVNLSNNPSEAEEAKAFVIITGPNMGGKSTYIRQIGAIALMNQIGSFIPASDAEFTP 751
Query: 592 -ISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
+ + D I +RVGA DSQ +G+STFM+EM ET++++ + NSL+IIDELGRGTST+DGF
Sbjct: 752 EVPIFDAILSRVGAGDSQMKGLSTFMIEMLETSSILATASHNSLIIIDELGRGTSTYDGF 811
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLS-RVIPTFRNVQVSA------LEQEDNLVL 703
G+A SI+ L + ++ F LFATHFHE+ LS + N+ V+A E +++ L
Sbjct: 812 GLAWSISEHLITEKRCFALFATHFHELTDLSTKYNDRVENLHVAAHVENEEKEGNNDITL 871
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
+Y+V+PG KS+G+H A++ +PE ++ A+ E + S
Sbjct: 872 MYKVEPGISDKSFGIHVAELVKFPEKIVNVAKRKASELQSS 912
>gi|348689982|gb|EGZ29796.1| hypothetical protein PHYSODRAFT_261139 [Phytophthora sojae]
Length = 814
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 245/706 (34%), Positives = 373/706 (52%), Gaps = 62/706 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY-----LNDNKNKIVTI 144
G A D + + D +NLE+++VQ +P C L AE + D+K K+ +
Sbjct: 52 GCAGEDTRQWELLLFSFSDSSELANLESLLVQLAPSTCYLSAELEQSQAVGDSK-KLHAL 110
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE----MCLTTATHCLRS 200
L ++V KK L QDV+ V + + L A + E + A L
Sbjct: 111 LQTHEVACVYMKKQ------LFQDVSG-VETNVARLLGASTMAEYKDVLASKLAAGSLAC 163
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY---DSLLG 257
LI+ L +M + D +++ + S + + SA + SL++LP+ +T+A S+L
Sbjct: 164 LIDALGVMADADAFGCYTLQEGNLSSAMQLDSAAVWSLNLLPEPSATTAGATRFGGSVLE 223
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
IL+R +TP G RLL +W++QPL D++ I R + V + V+++ RM L + ++ LPD+
Sbjct: 224 ILNRGKTPMGRRLLERWIRQPLLDVNQIETRQSLVQLFVDDSSLRMELLDECMKALPDLG 283
Query: 318 SLAMRIGRKK-AGLKDCYRVYEG-VSQLPKLISILE-----------SLVQNVEASNLNT 364
LA+ + RKK A + D VY+ V +P++ +L+ SLV+ A+ L
Sbjct: 284 RLAVSLERKKHAKITDLVSVYDAAVGAIPRVQKLLKETTAGGDEALASLVKEKFAAPLEK 343
Query: 365 ILSSLQS----------------LKMMDRKDAVMDKMKEY-------LESTARRLNLVAD 401
+L+ LQ L + + D + ++E +E R
Sbjct: 344 VLADLQGYTELVKEVVDLDSRPNLVVNAKHDKDLQALREEWDGILADIEDEHRNALDTIG 403
Query: 402 KTIKLE-NSPQGFAYRITMKLNNSIDDRYT---ILDTVRGGVRFQDDRLATANTQYQAIQ 457
IK E + +GFA+R+ K S + I + GV+F +L Y+ ++
Sbjct: 404 GEIKCEKDKVRGFAFRVVNKKEESRLSKLPYVHICQVLVSGVQFTTTKLKALAADYRRVR 463
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EYE Q ++ I +++ Y L + LA+ DVL+ F+ A+ A Y RP ++
Sbjct: 464 GEYEERQAHVLNAAIDVASTYVPVLEAATSTLAELDVLLGFAHAACHAGSGYCRPTLEQD 523
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
G +VL RHP VELQ V +IPND F+ + F LVTGPNMGGKSTYIR +G
Sbjct: 524 GD-CIVLTSARHPCVELQDSVDFIPNDYNFEREKSRFQLVTGPNMGGKSTYIRQLGTIAV 582
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQIG FVP + A + V D++ RVGA D Q RG+STFM+EM E + ++ K TE SLVII
Sbjct: 583 MAQIGSFVPAEVARLPVFDKLLVRVGAGDLQQRGVSTFMLEMLEASAILHKATERSLVII 642
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT-FRNVQVSALE 696
DELGRGTST+DGFG+A +I+ L S + LFATHFHE+ L + P F N V+A+
Sbjct: 643 DELGRGTSTYDGFGLAWAISEYLLSKARSMCLFATHFHELTALKQEHPQGFANKHVTAVA 702
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ + ++YQV+ G C++S+GVH A MAG+P ++E AR +E E
Sbjct: 703 SDREITMVYQVRDGPCMESFGVHVASMAGFPASVIECARRKSQELE 748
>gi|255729080|ref|XP_002549465.1| hypothetical protein CTRG_03762 [Candida tropicalis MYA-3404]
gi|240132534|gb|EER32091.1| hypothetical protein CTRG_03762 [Candida tropicalis MYA-3404]
Length = 876
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/690 (33%), Positives = 383/690 (55%), Gaps = 58/690 (8%)
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTI 144
L VGV +V+ T Y E D+D +SNLE++++Q KE L+P+ N + NK +
Sbjct: 141 LGKKVGVCVVENST--IYFAEFEDNDAFSNLESLLIQLGVKEALIPS---NIDNNKFLQA 195
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNA-RLLPEMCLTTATHCLRSLIN 203
+++ G K+ +D+ QD+ +L+ D+ EL A + L + C +LI+
Sbjct: 196 INKVNDLQIGAIKS--FPKDVEQDLEKLLDTDNVELTLASKGLNSSDFALSLSCCGALID 253
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL+L+++ F+I + S ++ + S+ + +L+V P + + L +C+
Sbjct: 254 YLDLLSSS---KAFTIEKYNLSSFMKLDSSTIKALNVFPAGNQKTVTSIYELF----KCK 306
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
T G +LL+QW+KQPL +L I ER V +++++T R+++ ++ L +PD+ + +I
Sbjct: 307 TTAGSKLLSQWLKQPLIELSTIEERQKLVELMIDDTSLRVDVQDF-LSKVPDIMRILKKI 365
Query: 324 GRKKAG-----LKDCYRVYEGVSQLPKLISIL-------------ESLVQNVEASNLNTI 365
G KK G L D +Y V LP L+ +L SL + E ++ +
Sbjct: 366 GSKKPGSDSKKLNDVVGLYNVVQLLPNLLDVLTVDYYLTPLKQSAASLAKFCELVEVSIV 425
Query: 366 LSSLQS-------------LKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLEN-SPQ 411
L Q +++ ++ +++D + + + LN+ +K +KLEN
Sbjct: 426 LDVAQYEDNRIKPEFNPKLVELENQMSSLIDAINQIHLNVGDDLNIDVNKKLKLENHQTY 485
Query: 412 GFAYRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G+ R+T + I ++ Y L T + GV F L + +Y + +Y+ Q +I
Sbjct: 486 GWCLRLTRAESVVIRNKRQYEQLQTQKMGVFFTTTELKRLSAEYSDARAQYDKEQSAITR 545
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCR 528
E++ + Y L+ LA DV+ + +A++ YV+P + P GT + L + R
Sbjct: 546 EILSLVLSYENVFGSLAGTLAHLDVIAT--LATSAMLNSYVKPKLHPFGTDRKIKLEESR 603
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC- 587
HP++E+Q +++I NDV E F ++TGPNMGGKSTYIR IGV LAQIG F+P
Sbjct: 604 HPLLEVQDDINFISNDVSMD--ENRFVVITGPNMGGKSTYIRQIGVVALLAQIGSFIPAN 661
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
+ A + + D I +RVGA DSQ +G+STFM+EM ET++++ TENSL+IIDELGRGTST+
Sbjct: 662 EGAELPIFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATENSLIIIDELGRGTSTY 721
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSALEQEDN-LVLLY 705
DGFG+A +I+ L + ++ F+LFATHFHE+ L+ P +N+ V A E E+N + L+Y
Sbjct: 722 DGFGLAWAISGHLINDKKCFSLFATHFHELNNLAEKYPGKVQNLHVVAQENEENDITLMY 781
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
+V+PG KS+G+H A++ +P+ ++ A+
Sbjct: 782 KVEPGISDKSFGIHVAELVKFPQKIVNMAK 811
>gi|325192358|emb|CCA26800.1| AlNc14C417G11489 [Albugo laibachii Nc14]
Length = 778
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 248/739 (33%), Positives = 389/739 (52%), Gaps = 74/739 (10%)
Query: 89 VGVAIV---------DLDTKKF--YMGEIPDDDYYSNLEAIIVQKSPKECLLP-----AE 132
+GVA++ D + KK+ + D +NLE + VQ P +C LP A
Sbjct: 27 IGVAVLLPHKAFNVNDKNHKKWELLLYAFSDTVALTNLETLFVQLCPTKCYLPIDLNIAN 86
Query: 133 YLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+ + K+ I ++V + KK+ FS +D+ ++ L+ A E+ +
Sbjct: 87 ASDRDSKKLHAITSAHQVETSHVKKHSFSSKDIESNLKHLLGVTSL----ATYKTELDMD 142
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A L LI+ ++LM + + S S + + + + SL++LP GS Q+
Sbjct: 143 IAIGSLSCLIDSMKLMTEVSVFGCYVLGSCSISSAMQLDGSAIWSLNLLPISGS--KQSN 200
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
S+L IL+R +T G RLL QW++QPL +AI ER V V+N R+ L E ++R
Sbjct: 201 GSVLEILNRGKTSIGRRLLEQWIRQPLLQYEAITERQEIVQTFVDNPSLRIELLEESMRA 260
Query: 313 LPDMQSLAMRIGRKK-AGLKDCYRVYEGVSQ--LPKLISILESLVQNVEASN-------- 361
+PD+ L ++ RKK ++ VY+ VS+ LP+LI+ L + VQ + N
Sbjct: 261 IPDLDRLCTKLERKKKVKIEHLISVYD-VSKVVLPQLITTLNTNVQLMATDNVRHLTERY 319
Query: 362 ---LNTILSSLQS-LKMMD---------------RKDAVMDKMKEY-------LESTARR 395
L TI S L+ L +++ + D + +++E +E ++
Sbjct: 320 INPLETIQSDLKGYLNLVEEVVDLDTRPTFIINAKHDPELARIREEWDQLTLEIEQEHQK 379
Query: 396 LNLVADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVR------GGVRFQDDRLAT 448
IK E + +GF +RI +N + R + L V GV F +L
Sbjct: 380 ARETIGGDIKCEKDKTRGFVFRI---INKKEEARISKLPYVHICQVLVNGVHFTTTKLKA 436
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
T+Y+ +Q EYE Q ++E + +++ Y L + + +LA+ D L+ F+ A+ A
Sbjct: 437 LATEYKRVQMEYEKRQAHVLEAAVEVASTYVPVLERTTFLLAELDCLLGFAHAACNAGSG 496
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
Y RP M T + L RHP VELQ V +IPN+ + F ++TGPNMGGKSTY
Sbjct: 497 YCRPIMS-RDTECIQLINARHPCVELQDDVDFIPNNFDLARNKSHFQIITGPNMGGKSTY 555
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR +G +AQ+G FVP D+A + + D++ RVGA DSQ +G+STFMMEM E ++++
Sbjct: 556 IRQLGTIAVMAQVGSFVPADAAQLPIFDKLLVRVGAGDSQQQGVSTFMMEMLEASSILHN 615
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR 688
TE SLVIIDELGRGTST+DGFG+A +I+ L ++ + TLFATHFHE+ LS P
Sbjct: 616 ATERSLVIIDELGRGTSTYDGFGLAWAISEYLITNTRAMTLFATHFHELTALSDEYPNGT 675
Query: 689 -NVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
N SA ++N+ ++YQ+K G C++S+GVH A++AG+P D+++ A+ ++ EY+ T
Sbjct: 676 VNRHTSAFAAKENVTMMYQIKKGPCMESFGVHVAELAGFPSDVIKSAKRKSQQLEYAEHT 735
Query: 748 --KTPSGDETNNREEEYFK 764
KT S N R E+ +
Sbjct: 736 ISKTKSLTCKNQRSNEFVQ 754
>gi|440803775|gb|ELR24658.1| DNA mismatch repair protein msh2, putative [Acanthamoeba
castellanii str. Neff]
Length = 961
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 241/746 (32%), Positives = 388/746 (52%), Gaps = 112/746 (15%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNL------------------------------EAI 118
VG A +DL+T+ + E DDD+ SN+ E++
Sbjct: 147 VGAAFIDLNTRTLNVCEFIDDDHLSNVYVSLYHAQDALERLWTDVGRHIYAPCHDRSESL 206
Query: 119 IVQKSPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKN-------------EFSEEDL 165
+VQ ECLL E + +I+T+L+ V T ++K EF+ L
Sbjct: 207 VVQVGATECLLAQEDEAET-TRILTVLEACNVLDTPKRKGGDHATHQFSVRRGEFAIHTL 265
Query: 166 MQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYS 225
QD+ L+ + + + + A CL I + EL+++ +N+N++ + S ++
Sbjct: 266 EQDLTTLLALPPLQHNYDEMQKQFAMGAAA-CL---IRHFELLSDSNNINKWHLKSHNFG 321
Query: 226 KYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAI 285
+Y+ + +LH++P+ + SL +L+ CRTP G R L QW+KQ +
Sbjct: 322 QYMRLDRTAFVTLHLIPEGKEKRSM---SLFSLLNHCRTPMGSRRLVQWIKQNI------ 372
Query: 286 VERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPK 345
V + ++ E R L E L+ +PD+ L +I + AGL+D R+Y+ V +L
Sbjct: 373 ------VELFFDDHELRGTLQENLLKRVPDVNRLMRKIVKGNAGLQDILRLYQFVEKLVG 426
Query: 346 LISIL----------------ESLVQNVEA-SNLNTILSSLQSLKMMDRKDAVM-----D 383
+ L E L + +E+ ++ ++ L ++D+ + + D
Sbjct: 427 IHMALSFYAGEHKDLITAKYEEPLAELIESFKQFEAMVETMVDLSLIDQHEYRIRPDFDD 486
Query: 384 KMKEY---LESTARRL----NLVAD------KTIKLENSPQ-GFAYRITMKLNNSIDDRY 429
+KE+ L+ + +++ + +AD K +KLE+S G+ +R+T + I +R
Sbjct: 487 DLKEFYKGLQKSKQKMEDLRSRIADDLKLDSKELKLESSKHVGYFFRLTARNEKLIRNRK 546
Query: 430 TILDTVRG----GVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQL 485
+ V G GV+F++ L N Y+ R YE Q IV V+ ++ Y Q + +
Sbjct: 547 DFI-RVEGQKKDGVKFRNSDLHRLNEDYKKFNRSYEQKQAQIVASVVTTTSTYQQPMERA 605
Query: 486 SDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDV 545
S+++A D VS +A A Y RP + G G +++ RHP +E +++I NDV
Sbjct: 606 SEIIADLDAFVS--MAHVSANWRYTRPQLTEPGVGDIIIKGSRHPCLETMDQINFIANDV 663
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
+ E ++TGPNMGGKSTYIR + + V +AQ+GCFVP +SA+IS+VD I RVGA
Sbjct: 664 NL-TRESRVQIITGPNMGGKSTYIRQVAMVVLMAQMGCFVPAESASISIVDAILVRVGAG 722
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
DSQ RGISTFM EM ETA +++ T SL+ IDELGRGTST+DGFG+A +I+R +A +
Sbjct: 723 DSQLRGISTFMAEMLETAAILRSATSKSLICIDELGRGTSTYDGFGLAWAISRHIAKEIK 782
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQED----NLVLLYQVKPGSCVKSYGVHCA 721
F LFATHFHE+ L+ IP N+ V+A ++ +L LYQ++PG+C +S+G+H A
Sbjct: 783 AFCLFATHFHELTSLADEIPHVANLHVTAQTGDEDKLADLTFLYQIRPGACDQSFGIHVA 842
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDT 747
KM +PE++++ A E E S DT
Sbjct: 843 KMTNFPEEIVKVAEAKAAELE-SFDT 867
>gi|256087125|ref|XP_002579727.1| hypothetical protein [Schistosoma mansoni]
Length = 895
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/534 (39%), Positives = 310/534 (58%), Gaps = 55/534 (10%)
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
+ S+ G L+ CRT QG RLLAQW++QPL D I ER V V T R LHE LR
Sbjct: 266 FHSVYGTLNNCRTAQGQRLLAQWLRQPLIDKSKIEERLDLVESFVEETGIRRGLHEDFLR 325
Query: 312 GLPDMQSLAMRIGR-KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQ 370
+PD+Q L R+ + K +GL+D YR+Y+ V +LP +S+L S +T+ S+
Sbjct: 326 RIPDLQRLGRRLKKIKGSGLQDVYRIYQAVLRLPYAVSLLNQYT----GSKQSTVYESMD 381
Query: 371 SL---------------------------------KMMDRKDAVMDKMKEYLESTARRLN 397
S ++ ++ D + +++++ A+ LN
Sbjct: 382 SFILFKDLVESNIDLDYVNQRNEFIVRADKDPLLQEIRNKLDNLEERIRDEFRRCAKILN 441
Query: 398 LVADKTIKLE-NSPQGFAYRITMKLNNSID--DRYTILDTVRGGVRFQDDRLATANTQYQ 454
L +K+IKLE N G+ R+T+K + + ILDT +GGVRF++ ++ + Y
Sbjct: 442 LEQNKSIKLESNELHGYFMRVTLKDEKCLRGLKTFEILDTQKGGVRFRNKQMTSLTETYA 501
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPK-PYVRPC 513
+++EY Q+ +V +V+ +A Y + +NQL++ A DV+VS +IA+ + Y+RP
Sbjct: 502 EVKQEYNGLQEVVVHQVVCAAATYLEPINQLNETTAFLDVIVSLAIAAISSSGVSYIRPK 561
Query: 514 MKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
+ G ++L + RHP +E+Q VS IPND++ + G+ F ++TGPNMGGKSTYI S+
Sbjct: 562 ILSEDNGRIILKEARHPCLEMQDRVSVIPNDIHLERGKQIFLIITGPNMGGKSTYIHSVA 621
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
V V +AQIG FVPC A I VD I RVGAAD Q RG+STF+ EM ET++V++ T NS
Sbjct: 622 VIVAMAQIGSFVPCSYAEIMPVDAIMARVGAADYQCRGVSTFLAEMLETSSVLRSVTRNS 681
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQP-FTLFATHFHEIALLSRVIP------- 685
LVIIDELGRGTST+DGFG+A ++A LAS F LFATHFHE+ L+ +P
Sbjct: 682 LVIIDELGRGTSTYDGFGLAWAVASFLASPEVGCFGLFATHFHELTSLAYYMPKRVANLR 741
Query: 686 TFRNVQ-----VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
NV V E E + +LY+V+ G C +SYG+ A++AG P ++++QA
Sbjct: 742 VLCNVSNDKEIVENKESETKVTMLYKVEAGVCSRSYGLDVARLAGLPIEVIKQA 795
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 99/252 (39%), Gaps = 67/252 (26%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
FY F+ K TT+R F R E +H DA L+ + LVK + +L V
Sbjct: 11 FYSFWKSLGPKPPTTLRCFERGEMMTLHDSDAILVATDYYKNLSLVKRFSRGKSSLSYVT 70
Query: 60 VNKSNLSCFSHIL----------CVIS-----------------EDKTLETVLTNT---- 88
V K N H L C + + ++E +LT+T
Sbjct: 71 VKKQNTDFLRHFLLKRQYRIEIYCSTTKCGRDNEWSLKLKASPGDLSSIEDLLTSTSESV 130
Query: 89 ------------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
V +A D +++KF +GE D + +NLE +VQ +ECL+P
Sbjct: 131 EACGLSAVNIKQLNEQIHVCLAFCDTESQKFLVGEFMDSVHLANLETALVQLKTRECLVP 190
Query: 131 AEYLN--DNKNKIVTILD------------RNKVCMTGRKKNEFSEEDLMQDVNRLVRFD 176
L+ D VT+LD R V T KK+EFS QD++ +RF
Sbjct: 191 TGLLSHPDISKSDVTLLDNAISEHVSLVFERTGVLPTEVKKSEFSHIIKPQDLSYFLRF- 249
Query: 177 DSELKNARLLPE 188
+ E N LL E
Sbjct: 250 EKENPNGSLLYE 261
>gi|301119939|ref|XP_002907697.1| DNA mismatch repair protein Msh2, putative [Phytophthora infestans
T30-4]
gi|262106209|gb|EEY64261.1| DNA mismatch repair protein Msh2, putative [Phytophthora infestans
T30-4]
Length = 816
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 241/702 (34%), Positives = 376/702 (53%), Gaps = 60/702 (8%)
Query: 94 VDLDTKKF--YMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY-----LNDNKNKIVTILD 146
D DTK++ + D +NLE+++VQ +P C L AE + D+K K+ +L
Sbjct: 52 ADEDTKQWELLLFSFSDSSELANLESLLVQLAPSTCYLSAELEQSQGVGDSK-KLHALLQ 110
Query: 147 RNKVCMTGRKKNEFSE-EDLMQDVNRLVRFDD-SELKNARLLPEMCLTTATHCLRSLINY 204
++V KK F + + +V RL+ +E K+ + L LI
Sbjct: 111 THEVAAVYMKKQLFYDVSGVETNVARLLGASTMAEYKDV-----LASKITAGSLACLIEA 165
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD---SLLGILDR 261
L +M + + +++ + S + + SA + SL++LP+ ST+ S+L IL+R
Sbjct: 166 LGVMTDAQSFGCYTLKEGNLSSAMQLDSAAVWSLNLLPEPSSTTTGVVSFGGSVLEILNR 225
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
+TP G RLL +W++QPL D+ I R + V + V+++ RM L + ++ LPD+ LA+
Sbjct: 226 GKTPMGRRLLERWIRQPLLDVKQIETRQSLVQLFVDDSSLRMELLDECMKALPDLGRLAI 285
Query: 322 RIGRKK-AGLKDCYRVYEG-VSQLPKLISILES-----------LVQNVEASNLNTILSS 368
+ RKK A + D VY+ V +P+++ +L++ LV+ A+ L +L+
Sbjct: 286 SLERKKHAKITDLVSVYDAAVGAMPRVLKLLKATEAGGDNDLATLVKEKFATPLEKVLAD 345
Query: 369 LQSLKMMDRKDAVMD---------KMKEYLESTARRLN-LVAD-------------KTIK 405
L+ + ++ +D K E L++ + ++AD IK
Sbjct: 346 LEGYTDLVKEVVDLDSRPTLVVNAKHDENLQALRDEWDGILADIEEEHRNALDTIGGDIK 405
Query: 406 LE-NSPQGFAYRITMKLNNSIDDRYT---ILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
E + +GFA+R+ K + + + I + GV+F +L T Y ++ EYE
Sbjct: 406 CEKDKVRGFAFRVVNKKEEARLSKLSYVHICQVLVSGVQFTTTKLKALATDYHRVRGEYE 465
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q ++ I +++ Y L + LA+ DVL+ F+ A+ A Y RP ++ G
Sbjct: 466 ERQSHLLSAAIDVASTYVPVLEAATATLAELDVLLGFAHAACHAGSGYCRPTLEQDGE-C 524
Query: 522 LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 581
+VL RHP VELQ GV +IPND F F LVTGPNMGGKSTYIR +G +AQI
Sbjct: 525 IVLTSARHPCVELQDGVDFIPNDYNFVRERSRFQLVTGPNMGGKSTYIRQLGTIAVMAQI 584
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
G FVP + A + V D++ RVGA D Q RG+STFM+EM E + ++ K TE SLVIIDELG
Sbjct: 585 GSFVPAEVARLPVFDKLLVRVGAGDLQQRGVSTFMLEMLEASAILHKATERSLVIIDELG 644
Query: 642 RGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSALEQEDN 700
RGTST+DGFG+A +I+ L + + LFATHFHE+ L P F N V+A+ +
Sbjct: 645 RGTSTYDGFGLAWAISEYLLTKARSMCLFATHFHELTALKLEHPHGFANKHVTAVASDRE 704
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ ++YQV+ G C++S+GVH A MAG+P+ ++E AR +E E
Sbjct: 705 ITMVYQVRDGPCMQSFGVHVASMAGFPKSVIECARLKSQELE 746
>gi|255070289|ref|XP_002507226.1| predicted protein [Micromonas sp. RCC299]
gi|226522501|gb|ACO68484.1| predicted protein [Micromonas sp. RCC299]
Length = 963
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 274/867 (31%), Positives = 424/867 (48%), Gaps = 133/867 (15%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
F F+ P K IR F+R + Y VHG++A LI R + +G + L +
Sbjct: 19 FVAFYRSLPADPKI-IRIFSRKDNYSVHGDNAVLIARTFLKTTTALHYLGHGESALPGLT 77
Query: 60 VNKSNLSCFSHILCVISEDKTLETV----------------------------------L 85
+N+ NL F IL + D+T V L
Sbjct: 78 LNR-NL--FESILRELLLDRTEHLVELYEETSRQVWKLSRTASPGKLDAFEEELNRSDDL 134
Query: 86 TNTVGVAIVDLD----------------TKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
+T VA V + T+ F E DDD LEA I Q KEC+L
Sbjct: 135 FDTPAVAAVQVKVRMDQQHVGFAYFNPVTRHFGACEFVDDDQLRILEATICQLGIKECVL 194
Query: 130 PAEYL-NDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSE--------- 179
+ + N ++ ++ R + R ++F L D++ L+ + SE
Sbjct: 195 QLQAIETPNGRRLRDLISRCGALASQRATSDFDINHLEHDLSCLLAHEASENIRTVNVVN 254
Query: 180 LKNARLLPE----MCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVM 235
NA L + A L + + + + + + ++ + ++ D KYV + S+ +
Sbjct: 255 APNAAALEHHRAILTKELAAGALAATLRFSDALADSNHRGRCTLALHDTGKYVRLDSSAL 314
Query: 236 SSLHVLPQQ----GSTSAQTYD-----SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
S+L+VLP++ ST++ D SL +L++CR P G R+L +W+KQPL D I
Sbjct: 315 SALNVLPERRVLSPSTASAAADAISNFSLYDLLNKCRCPMGRRMLFRWLKQPLLDTVEIG 374
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP-- 344
RH V VNN E R L LR LPD+ + RI R++A L D ++Y+ + LP
Sbjct: 375 RRHDVVEAFVNNPEVRDALRGTHLRALPDIHRITRRIERRRANLADLCKLYQASAALPYI 434
Query: 345 ---------------------KLISI--------LESLVQNVEASNLNTILS-------- 367
KLI + E+L++ A +LN I
Sbjct: 435 AGAVSQIDTCHSRALRDMYTDKLIKLSDNDHLGKYEALIE--AAIDLNKIPEEYVIDASY 492
Query: 368 SLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRITMK----LN 422
L + RKDA + +++ + A L + A K +KLE N+ G+ R+T K +
Sbjct: 493 DLDLEILQKRKDAANEDLQKAFQDAADDLRMQAGKALKLESNNMYGWYLRLTKKDETTVR 552
Query: 423 NSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ Y IL+ + G +F + RL + +++ + + YE Q+ +V+ V+ ++A +
Sbjct: 553 RQLSASYQILEAKKDGTKFTNKRLHSLSSKCMELDKAYECQQRVLVDRVVDVAASFVDVF 612
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS------LVLNQCRHPIVELQG 536
++S++ A+ DVL SF+ + AP P+ RP + P + + ++L RHP +ELQ
Sbjct: 613 LEVSNLCAEIDVLASFAEVAVSAPLPFTRPSVHPKQSNADSIREEIILKDSRHPCMELQH 672
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
GV ++ N + G+ F L+TGPNMGGKST+IR +G+ V +AQ+G FVPC A I+V D
Sbjct: 673 GVQFVSNTCTLQRGKSWFQLITGPNMGGKSTFIRQVGICVLMAQVGSFVPCAEAKIAVRD 732
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
I+ RVGA DSQ RGISTFM EM ET +IK T +SL+IIDELGRGTST+DGFG+A +I
Sbjct: 733 AIYARVGAGDSQLRGISTFMAEMLETTAIIKAATPSSLIIIDELGRGTSTYDGFGVAWAI 792
Query: 657 ARELASHRQPFTLFATHFHEI-ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
+ + + + LFATHFHE+ AL + T +V E+ L +LY V PG +S
Sbjct: 793 SEYIMRNVKAPCLFATHFHELTALQGPLGVTNYHVDAEIDERSGKLTMLYCVSPGVSDQS 852
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE 742
+G+ CA+ A +PE +++ AR+ E E
Sbjct: 853 FGIECAEYAKFPEQVIKNAREKALELE 879
>gi|149234545|ref|XP_001523152.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453261|gb|EDK47517.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 968
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 241/769 (31%), Positives = 396/769 (51%), Gaps = 129/769 (16%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTIL 145
+N VGV +++ D + + E D+D SNLE ++VQ KE ++P N + +++ ++
Sbjct: 141 SNKVGVCLIEEDIIR--LCEFEDNDLLSNLEGLLVQFGVKEVVVP----NLGEKRLMLVI 194
Query: 146 DR--NKVCMTGRKKNEFSEEDLMQDVNRLVRFDD-----SELKNARLLP----------- 187
++ N V T +F+ + + QD+ +L+ D E+ N +
Sbjct: 195 NKISNIVVSTS---TQFNTKYIEQDLVKLLAHGDEAGEAGEVGNDAISNNDNNSSNNNNN 251
Query: 188 ---EMCLTT----------ATHCLRSLINYLELMNNEDNMN---QFSIHSIDYSKYVHMS 231
EM + + C +LI+YL L+ + +++ + + D ++ +
Sbjct: 252 NNLEMAFSAKGIKMTEHPISLSCCNALISYLGLLEEQTDLSTSRAYHLEKYDLLSFMKLD 311
Query: 232 SAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAA 291
S+ + +L+V P+ ST T S+ +L++C+T G RLL+QW+KQPL +D I ER
Sbjct: 312 SSTLKALNVFPEFKST---TISSIFELLNKCKTAGGSRLLSQWLKQPLTLVDEIEERQTL 368
Query: 292 VNILVNNTEARMNLHEYALRGLPDMQSL-------AMRIGRKKAGLKDCYRVYEGVSQLP 344
V +L+N++ R+++ AL +PD++ L M+ G + L+D R+Y+ V LP
Sbjct: 369 VALLINDSTLRVSIQN-ALTQIPDIKRLLKKLTIAMMKNGNENKKLEDLVRLYQIVLVLP 427
Query: 345 KLISIL---ESLVQNVEASNLNTILSSLQSLKMM-------------------------- 375
+LI L + +V + + S+L + +
Sbjct: 428 ELIEALTDKDKIVDKFWLEPIKKLYSALLKFQELIETTVDLKGLHDLHSNFDIRPEFDAS 487
Query: 376 -----DRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSI---- 425
++K MD++K+ A LN+ DK +KLE + G+ R+T N+S+
Sbjct: 488 LVEINEKKTEAMDRIKQLHLDAADDLNMDVDKKLKLEMHQIHGYCMRLTR--NDSVVLRN 545
Query: 426 DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQL 485
+ +Y + TV+ GV F Y EY Q+ ++ EVI IS Y +L
Sbjct: 546 NRKYIEIQTVKAGVYFTTSEFRKQAQVYTHSCEEYNHKQRELIREVISISLTYLSVFTKL 605
Query: 486 SDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN--QCRHPIVELQGGVSYIPN 543
S L+ DV+ SF+ A+ AP YVRP M P+ + V+N RHP++E+Q V +IPN
Sbjct: 606 SLDLSHLDVINSFANAALLAPTTYVRPKMIPLDSEKRVVNVKNSRHPLLEVQEDVEFIPN 665
Query: 544 DVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD--------------- 588
D+ G FN++TGPNMGGKSTY++ I +AQ+G F+P D
Sbjct: 666 DISI--GSKFFNIITGPNMGGKSTYLKQIATLALMAQVGSFIPADDLREEEEEEEKEEAA 723
Query: 589 -------------SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
+ T+ V D I +RVGA DSQ +G+STFM+EM ET++++ T NSL+
Sbjct: 724 AAAAAKSGENKNGAPTLPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATRNSLI 783
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNVQVSA 694
IIDELGRGTST+DGFG+A SI+ L ++ TLFATHFHE+ L++ P N+ V A
Sbjct: 784 IIDELGRGTSTYDGFGLAWSISDHLIQVKKCITLFATHFHELNQLAKKYPLEVENLHVVA 843
Query: 695 -LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+E +D++ L+Y+++PG KS+G++ A+M +PE +++ A+ +E E
Sbjct: 844 YVENQDDITLMYKIEPGVSNKSFGINVAEMVNFPEKIIKMAKRKAEELE 892
>gi|241955156|ref|XP_002420299.1| DNA mismatch repair protein MSH2, putative [Candida dubliniensis
CD36]
gi|223643640|emb|CAX42523.1| DNA mismatch repair protein MSH2, putative [Candida dubliniensis
CD36]
Length = 873
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 253/813 (31%), Positives = 424/813 (52%), Gaps = 102/813 (12%)
Query: 8 FPQKSKTTIRFF--NRVEFYCVHGEDAELIQRKSNVVYLVKTMGQKDKTLETVLVNKSNL 65
P K TTIRF N +++ G DA+LI K +Y +++ + + V ++ N
Sbjct: 26 LPPKESTTIRFIDHNNHDYFTALGSDADLIAEK---IYRTQSVIKHHNQTKYVTISPQNF 82
Query: 66 S-----CF-SHILCVISEDKTLETVLTNTVG----------------------VAIVDLD 97
C +H+ + KT + + + T G +A + L
Sbjct: 83 KESLNYCLQNHLKVEVYHSKTFQLISSGTAGNLDSLSEEFDIDFDFKDGSSSSIAAIKLG 142
Query: 98 TKK---------FYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR- 147
+K ++ E D++ YSNLE++++Q KE ++PA DNK K +L++
Sbjct: 143 SKVGVCVIADSIVHLSEFEDNELYSNLESLLIQLGVKEVVIPANV--DNK-KFFQMLEKI 199
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELK-NARLLPEMCLTTATHCLRSLINYLE 206
N + ++ K +D QD+++L+ ++ EL A+ + + ++A C +LI YL+
Sbjct: 200 NDLVVSAAKS---FPKDNEQDISKLLDTENLELTLAAKGINSLDYSSALSCCGALIAYLD 256
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
L+N + F I+ + S ++ + S+ M +L++LP G+ A T S+ + +C+T
Sbjct: 257 LLNGD---KTFEINKYNLSTFMKLDSSTMKALNILPN-GTQRAIT--SIFELF-KCKTLA 309
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI--G 324
G RLLAQW+KQPL DL I ER V ++++T R+ E+ L +PD+ L ++ G
Sbjct: 310 GSRLLAQWLKQPLIDLPLIEERQELVKSMIDDTSLRVETQEF-LSKVPDINRLLKKVSLG 368
Query: 325 RKKAG-----LKDCYRVYEGVSQLPKLISIL------ESLVQNVEA---------SNLNT 364
K++G L + +Y+ VS LP L IL + L ++ +A + ++
Sbjct: 369 VKRSGAENKKLNEVVNLYQLVSLLPNLTEILTVDYYAKPLKKDEQALSKFCELVETTIDL 428
Query: 365 ILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLV------------ADKTIKLE-NSPQ 411
S + K+ D + ++ +E+ + +N + A +KLE +
Sbjct: 429 DTSFDKDYKIKPDFDPSLSEISNTMEAAFKAINDLYLEAGDDLNLDTASNKLKLEQHQTH 488
Query: 412 GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G+ R+T + + +Y L TV+ GV F + + +Y EY Q +++
Sbjct: 489 GWCMRVTRNDSRVLRGKSQYKELQTVKSGVFFTTIEMKRLSQEYAKAYDEYNVKQSEVIK 548
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCR 528
E++ ++ Y L LS LA DV+ SF A+T Y +P + P + + L + R
Sbjct: 549 EILSLTLTYEPVLQSLSSTLAHLDVITSF--ATTAMLNSYTQPKLFPFESARKINLIESR 606
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC- 587
HP++E+Q V++I NDV K G+ F ++TGPNMGGKSTYIR IG +AQ+G FVP
Sbjct: 607 HPLLEVQDDVNFISNDV--KMGDKHFAIITGPNMGGKSTYIRQIGTIALMAQVGSFVPAN 664
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
+ A + + D I +RVGA DSQ +G+STFM+EM ET++++ T NSL+IIDELGRGTST+
Sbjct: 665 EGAELPIFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATANSLIIIDELGRGTSTY 724
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DGFG+A +I+ EL R+ F +FATHFHE++ LS N+ + A + +++ L+Y+V
Sbjct: 725 DGFGLAWAISEELI-KRKCFAVFATHFHELSQLSEKYDGVENLNLMAEQTNEDITLIYKV 783
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
PG S+G+ A+ PE ++ A+ ++E
Sbjct: 784 GPGISNTSFGISVAEKLHMPEKIINMAKRKVEE 816
>gi|68481114|ref|XP_715472.1| hypothetical protein CaO19.10605 [Candida albicans SC5314]
gi|68481255|ref|XP_715402.1| hypothetical protein CaO19.3093 [Candida albicans SC5314]
gi|46437024|gb|EAK96377.1| hypothetical protein CaO19.3093 [Candida albicans SC5314]
gi|46437096|gb|EAK96448.1| hypothetical protein CaO19.10605 [Candida albicans SC5314]
Length = 873
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 251/813 (30%), Positives = 420/813 (51%), Gaps = 102/813 (12%)
Query: 8 FPQKSKTTIRFF--NRVEFYCVHGEDAELIQRKSNVVYLVKTMGQKDKTLETVLVNKSNL 65
P K TTIRF N +++ G DA+LI K +Y +++ + + V ++ N
Sbjct: 26 LPPKESTTIRFIDHNNHDYFTALGSDADLIAEK---IYRTQSVIKHHNQTKYVTISPQNF 82
Query: 66 S-----CF-SHILCVISEDKTLETVLTNTVG----------------------VAIVDLD 97
C +H + KT + + + T G +A + L
Sbjct: 83 KESLNYCLQNHFKVEVYHSKTFQLISSGTAGNLDSLSEEFDIDFDFRDGSSSSIAAIKLG 142
Query: 98 TKK---------FYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR- 147
K ++ E D++ YSNLE++++Q KE ++PA DNK K +L++
Sbjct: 143 NKVGVCVIADSIVHLSEFEDNELYSNLESLLIQLGVKEVVIPANV--DNK-KFFQMLEKL 199
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELK-NARLLPEMCLTTATHCLRSLINYLE 206
N + ++ K +D QD+++L+ ++ EL A+ + + A C +LI+YL+
Sbjct: 200 NDLVVSAAKS---FPKDNEQDISKLLDTENLELSLAAKGINSLDYALALSCCGALIDYLD 256
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
L+N + F I+ + S ++ + S+ M +L++LP G+ A T S+ + +C+T
Sbjct: 257 LLNGD---KTFEINKYNLSTFMKLDSSTMKALNILPN-GTQKAIT--SIFELF-KCKTLG 309
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR- 325
G RLL+QW+KQPL DL I ER V ++++T R+ + E+ L +PD+ L +IG
Sbjct: 310 GSRLLSQWLKQPLIDLSLIEERQELVKAMIDDTSLRVEIQEF-LSKVPDINRLLKKIGLG 368
Query: 326 -KKAG-----LKDCYRVYEGVSQLPKLISIL------ESLVQNVEA---------SNLNT 364
K++G L + +Y+ VS LP L IL + L ++ +A + ++
Sbjct: 369 VKRSGAENKKLNEVVNLYQLVSLLPNLTEILTIDYYAKPLKKDEQALSKFCELVETTIDL 428
Query: 365 ILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLV------------ADKTIKLE-NSPQ 411
S + K+ D + ++ +ES + +N + A +KLE +
Sbjct: 429 DTSFDKDYKIKPDFDPSLSEISNNMESAFKAINDLYLEAGDDLNLDTASNKLKLEQHQTH 488
Query: 412 GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G+ R+T + + +Y L TV+ GV F + + +Y EY Q +++
Sbjct: 489 GWCMRVTRNDSRVLRGKSQYKELQTVKSGVFFTTIEMKRLSQEYTKAYDEYNVKQSEVIK 548
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCR 528
E++ ++ Y L LS LA DV+ F A+T Y +P + P + + L + R
Sbjct: 549 EILSLTLTYEPVLQSLSSTLAHLDVITCF--ATTAMLNSYTQPKLFPFESSRKINLIESR 606
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC- 587
HP++E+Q +++I NDV K + F ++TGPNMGGKSTYIR IG +AQ+G F+P
Sbjct: 607 HPLLEVQDDINFISNDV--KMDDKHFAIITGPNMGGKSTYIRQIGTIALMAQVGSFIPAN 664
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D I +RVGA DSQ +G+STFM+EM ET++++ T NSL+IIDELGRGTST+
Sbjct: 665 DGAELPIFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATANSLIIIDELGRGTSTY 724
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DGFG+A +I+ EL R+ F +FATHFHE++ LS N+ + A + +++ L+Y+V
Sbjct: 725 DGFGLAWAISEELI-KRKCFAVFATHFHELSQLSEKYDGVENLNLMAEQTNEDITLIYKV 783
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
PG S+G+ A+ PE ++ A+ ++E
Sbjct: 784 GPGISNTSFGISVAEKLHMPEKIVNMAKRKVEE 816
>gi|238881184|gb|EEQ44822.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 873
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 251/813 (30%), Positives = 420/813 (51%), Gaps = 102/813 (12%)
Query: 8 FPQKSKTTIRFF--NRVEFYCVHGEDAELIQRKSNVVYLVKTMGQKDKTLETVLVNKSNL 65
P K TTIRF N +++ G DA+LI K +Y +++ + + V ++ N
Sbjct: 26 LPPKESTTIRFIDHNNHDYFTALGSDADLIAEK---IYRTQSVIKHHNQTKYVNISPQNF 82
Query: 66 S-----CF-SHILCVISEDKTLETVLTNTVG----------------------VAIVDLD 97
C +H + KT + + + T G +A + L
Sbjct: 83 KESLNYCLQNHFKVEVYHSKTFQLISSGTAGNLDSLSEEFDIDFDFRDGSSSSIAAIKLG 142
Query: 98 TKK---------FYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR- 147
K ++ E D++ YSNLE++++Q KE ++PA DNK K +L++
Sbjct: 143 NKVGVCVIADSIVHLSEFEDNELYSNLESLLIQLGVKEVVIPANV--DNK-KFFQMLEKL 199
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELK-NARLLPEMCLTTATHCLRSLINYLE 206
N + ++ K +D QD+++L+ ++ EL A+ + + A C +LI+YL+
Sbjct: 200 NDLVVSAAKS---FPKDNEQDISKLLDTENLELSLAAKGINSLDYALALSCCGALIDYLD 256
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
L+N + F I+ + S ++ + S+ M +L++LP G+ A T S+ + +C+T
Sbjct: 257 LLNGD---KTFEINKYNLSTFMKLDSSTMKALNILPN-GTQKAIT--SIFELF-KCKTLG 309
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR- 325
G RLL+QW+KQPL DL I ER V ++++T R+ + E+ L +PD+ L +IG
Sbjct: 310 GSRLLSQWLKQPLIDLSLIEERQELVKAMIDDTSLRVEIQEF-LSKVPDINRLLKKIGLG 368
Query: 326 -KKAG-----LKDCYRVYEGVSQLPKLISIL------ESLVQNVEA---------SNLNT 364
K++G L + +Y+ VS LP L IL + L ++ +A + ++
Sbjct: 369 VKRSGAENKKLNEVVNLYQLVSLLPNLTEILTIDYYAKPLKKDEQALSKFCELVETTIDL 428
Query: 365 ILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLV------------ADKTIKLE-NSPQ 411
S + K+ D + ++ +ES + +N + A +KLE +
Sbjct: 429 DTSFDKDYKIKPDFDPSLSEISNNMESAFKAINDLYLEAGDDLNLDTASNKLKLEQHQTH 488
Query: 412 GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G+ R+T + + +Y L TV+ GV F + + +Y EY Q +++
Sbjct: 489 GWCMRVTRNDSRVLRGKSQYKELQTVKSGVFFTTIEMKRLSQEYTKAYDEYNVKQSEVIK 548
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCR 528
E++ ++ Y L LS LA DV+ F A+T Y +P + P + + L + R
Sbjct: 549 EILSLTLTYEPVLQSLSSTLAHLDVITCF--ATTAMLNSYTQPKLFPFESSRKINLIESR 606
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC- 587
HP++E+Q +++I NDV K + F ++TGPNMGGKSTYIR IG +AQ+G F+P
Sbjct: 607 HPLLEVQDDINFISNDV--KMDDKHFAIITGPNMGGKSTYIRQIGTIALMAQVGSFIPAN 664
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D I +RVGA DSQ +G+STFM+EM ET++++ T NSL+IIDELGRGTST+
Sbjct: 665 DGAELPIFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATANSLIIIDELGRGTSTY 724
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DGFG+A +I+ EL R+ F +FATHFHE++ LS N+ + A + +++ L+Y+V
Sbjct: 725 DGFGLAWAISEELI-KRKCFAVFATHFHELSQLSEKYDGVENLNLMAEQTNEDITLIYKV 783
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
PG S+G+ A+ PE ++ A+ ++E
Sbjct: 784 GPGISNTSFGISVAEKLHMPEKIVNMAKRKVEE 816
>gi|350582428|ref|XP_003481267.1| PREDICTED: DNA mismatch repair protein Msh2-like [Sus scrofa]
Length = 450
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/437 (42%), Positives = 279/437 (63%), Gaps = 6/437 (1%)
Query: 379 DAVMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTV 435
D + KM+ L S AR L L K IKL++S Q G+ +R+T K + + ++ +D
Sbjct: 2 DDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQ 61
Query: 436 RGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVL 495
+ GV+F + +L + N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +
Sbjct: 62 KNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQLDAV 121
Query: 496 VSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFN 555
VSF+ S AP PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+
Sbjct: 122 VSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFH 181
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
++TGPNMGGKSTYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STF
Sbjct: 182 IITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTF 241
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M EM ETA++++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFH
Sbjct: 242 MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH 301
Query: 676 EIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
E+ L+ IPT N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+
Sbjct: 302 ELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAK 361
Query: 736 DLMKEYEYSLDTKTP-SGDETNNREEEYFKTVQEGEYQMFDFLQQC--LSLSKQKDTNRI 792
E E + P DE + + ++GE + +F+ + + ++ + N
Sbjct: 362 QKALELEEFQNIGAPQEHDEMEPAAKRCYLEREQGEKIIQEFVSKVKQVPFTEMSEENIT 421
Query: 793 LHLQETQEPGIEEYQSF 809
+ L++ + + + SF
Sbjct: 422 MKLKQLKAEVMAKNNSF 438
>gi|430812726|emb|CCJ29847.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 711
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 226/648 (34%), Positives = 346/648 (53%), Gaps = 73/648 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
VG+A +D TKK + E D++ Y+N E ++VQ + KE ++P +NKN K+ T+
Sbjct: 16 VGIAFLDGLTKKLGVTEFIDNELYNNFEFLLVQLNTKEVIIPLN--EENKNLELSKVKTV 73
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+ + +T + +F ++L D F++ LK LL + A + +LI Y
Sbjct: 74 SENAGMIVTEISEQDFKIDNLNYDFPCF--FNEESLK---LLSHIESKIAKSSIAALIKY 128
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRT 264
L NN + + ++ + S+Y+ + + +L + P S ++ SL G+L+RC+T
Sbjct: 129 LLYTNNLTDSEKLQLYKYNLSQYMKLDIPALKALSLFPDPTFESNKSM-SLFGLLNRCKT 187
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG 324
G RLL+QW+KQPL DL I +R V N A ++ E+ L+ PD+ L +
Sbjct: 188 AIGSRLLSQWIKQPLMDLIEINKRQLLVEAFSKNLHALQSVQEF-LKSFPDVYKLNRKFQ 246
Query: 325 RKKAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEASNLNTILSSLQS----- 371
+KKA L++ RVY+ + ++P LI+ LE L+Q + S L +L+
Sbjct: 247 KKKATLEEVVRVYQMIIKIPDLINALEGVNDHNYSVLIQELYLSKLKEFNGNLKKYIKLI 306
Query: 372 -----LKMMDRKDAVMDKMKEYLESTARRLNLVAD---------------------KTIK 405
+ M + ++ E+ ES R LN + + K +K
Sbjct: 307 ETTIDFEAMSNHEWIIKS--EFDESLTRLLNELNELKDKIYQEHLRVGEELQQDTMKKLK 364
Query: 406 LENSP-QGFAYRITMKLNNSIDDR-YTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
LE S G+ R+T SI D+ Y L T++ GV F + + +Y I +Y+
Sbjct: 365 LEQSEIHGWCLRLTRSHAYSIRDKNYIELSTLKSGVYFTTLMMRQYSKEYNDILAQYKHQ 424
Query: 464 QQSIVEEVIGIS---------------AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
Q + +EV+ I+ A + + +L V+ DV++SFS S+ + P
Sbjct: 425 QTELAKEVVEIAGILIYYFRFKSMVILASFCPIMEELGMVIGHLDVIISFSDLSSSSVLP 484
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
YVRP + ++L + RHP +E+Q +++I NDVY + G F ++TGPNMGGKSTY
Sbjct: 485 YVRPIISK--DSKIILKESRHPCLEIQTDITFISNDVYLERGVSEFLIITGPNMGGKSTY 542
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR IG+ V +AQIGCFVPC+ A IS+ D I RVGA D+Q +GISTFM EM ETAT+++
Sbjct: 543 IRQIGIIVLMAQIGCFVPCEKAEISIFDCILARVGANDTQLKGISTFMAEMLETATILET 602
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+ NSL+IIDELGRGTST DGFG+A +I+ L S F+LFATHFHE
Sbjct: 603 ASSNSLIIIDELGRGTSTADGFGLAWAISEYLISKINAFSLFATHFHE 650
>gi|146164189|ref|XP_001013224.2| MutS domain III family protein [Tetrahymena thermophila]
gi|117556983|gb|ABK35677.1| putative mismatch repair protein [Tetrahymena thermophila]
gi|146145776|gb|EAR92979.2| MutS domain III family protein [Tetrahymena thermophila SB210]
Length = 813
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 218/715 (30%), Positives = 370/715 (51%), Gaps = 65/715 (9%)
Query: 86 TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPK----ECLLPAEY--LNDNKN 139
T V AI+D D +KF + E D +YYSN E++I+Q +P+ + LL +Y L K
Sbjct: 26 TRQVNAAILDSDQRKFQVTEFQDTEYYSNFESLILQTNPQNQHTQFLLLIQYPDLTTEKE 85
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
K+ I+ + + + + K F E+ D+N+L++ A+ + E LT A L
Sbjct: 86 KVNDIVQQCDINVKEKDKKSFLEKGYEDDLNKLLK-----KPLAQYIQESQLTHALSSLA 140
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT-------- 251
++ L+L N NQF++ ++ + ++ + A +++L + P++ +
Sbjct: 141 CIVGDLQLSKEPTNQNQFTVETLILNNFMKLDLAAINALLIFPKEKDIQRRNLMGGQENN 200
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
+ +L+ +LD+C+T G R L +W+KQPLK+ I R V VNN + R + LR
Sbjct: 201 FSTLVDLLDKCKTQIGSRTLKRWIKQPLKNEAEINRRLDIVEYFVNNQDLRNYIQNEFLR 260
Query: 312 GLPDMQSLAMR---IGRKK---AGLKDCYRVYEGVSQLPKLISILES------LVQNVEA 359
+ D+ L + + KK A L DC +VY+ V+ L L +E+ L Q
Sbjct: 261 KIADLDKLYAKFYKVASKKKHNASLADCIKVYQLVTNLSTLAQYIENNHSADELAQREFL 320
Query: 360 SNLNTILSSLQSLKMMDRKDAVMDKMK---EY---------LESTARRLNLVADKTIKLE 407
L IL + + L M + M+K + EY L A+++ + + L
Sbjct: 321 IPLGEILENFEKLSSMIDQSIDMEKARRDNEYQVSSKFSPTLAELAKQMKQIMKQIESLR 380
Query: 408 N---------------SPQGFAYRITMKLNNSIDDR-----YTILDTVRGGVRFQDDRLA 447
N + + + K + R Y + +G + F D L
Sbjct: 381 NEYAQELGVEPKLVESTTHTYLFESKKKETDEAFRRLHSRKYKSISVKKGCISFTTDELQ 440
Query: 448 TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPK 507
+Y +++ Y+ Q+S+V++++ + + Y + + S V+++ DVL +F+ A +
Sbjct: 441 ACVAEYNSLKDNYQEEQKSVVQKILDVVSTYYPAMERASFVISELDVLANFASLVNSATR 500
Query: 508 PYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
PYV+P + + L + RHP +E+ + + ND + + + F+++TGPNMGGKST
Sbjct: 501 PYVKPNIHA-SNKQINLVESRHPCLEVMDN-NCVANDCFMDNDKSRFHIITGPNMGGKST 558
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
+IR + + V LA IGCF+PC S + ++D I TRVGA+D Q RGISTFM EM E + ++
Sbjct: 559 FIRQVAICVLLAHIGCFIPCKSGEMPIIDAIITRVGASDMQLRGISTFMSEMLEASNMLM 618
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
TENSL+IIDELGRGTST +GFG+A +I+ +A+ + + LFATHFHE+ + + +
Sbjct: 619 TATENSLIIIDELGRGTSTSEGFGIAWAISEHIANKIKCYCLFATHFHEMTKMEQEVKGV 678
Query: 688 RNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
N VS + ++ L + Y++K G +SYG+ A+ +P ++LE A + + E E
Sbjct: 679 INYYVSCVTIDNKLTMQYKLKRGFAERSYGLFVAETLDFPREILEHASNKLLELE 733
>gi|452822720|gb|EME29737.1| DNA mismatch repair protein MutS [Galdieria sulphuraria]
Length = 956
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 230/741 (31%), Positives = 374/741 (50%), Gaps = 78/741 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL-LPAEYLNDNKNKIVTILDR 147
+GVA ++ F GE +D+ ++ E+I+V KE PA+ K + R
Sbjct: 177 LGVAFYEIGDSSFLTGEFCEDETFALCESILVSLQAKEIFYCPADLQEKELRKFRDMTAR 236
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTAT--------HCLR 199
MT + + EF +++D+ ++ L +A + P T C
Sbjct: 237 LNFLMTPQDRKEFESSLVVRDLTKV-------LGDASIPPSTLEQTLVLQALAVLLKCCG 289
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP------QQGSTSAQTYD 253
+ + +E + + +F + ++ S+Y+ + +A + L +LP ++ ++S + D
Sbjct: 290 LVPDLIESNDEHLSKPRFLLKPLEMSQYLRLDAACIRGLDLLPLNNRELERVASSVKRKD 349
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SL GIL++ +T G RLL +W+ PL++++ I +R V + N R + L+ +
Sbjct: 350 SLYGILNKTKTVMGSRLLKKWLLMPLQNIEEIEKRQNVVETFIENAIFRTEFRDRHLKFV 409
Query: 314 PDMQSLAMRIGR-KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL 372
PD+ L R + K L+ +Y+ +LP L+ ++S L L SL
Sbjct: 410 PDLARLCRRFQKLKNVTLRHVICLYQLSIRLPLLLDCFSQYTMADDSSPLKPYWQRLISL 469
Query: 373 ------------------------------------KMMDRKDAVMDKMKEYLESTARRL 396
+MM KD ++ ++ E L
Sbjct: 470 HTELDRFEELIEATIDLDLVQNNEYVVSARIDENLSEMMRVKDEILAEIAVVHEDVCSHL 529
Query: 397 NLVADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQY 453
NL DK +KLE GF +R++ K + + Y IL+T + G+RF L + +Y
Sbjct: 530 NLKTDK-LKLERKESAGFFFRLSRKDERLVRGNPHYVILETRKDGIRFVTKALNRLSERY 588
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPC 513
I EY+ Q+ + ++I + A Y + S VLA+ DVL +F+I + AP+PY RP
Sbjct: 589 FCICTEYDKKQEEMENKIIQVVASYISVFEEASLVLAELDVLSTFAIVAVDAPEPYCRPS 648
Query: 514 MKPMGTGSLVLNQCRHPIVELQ-GGVSYIPNDVYFKS--------GEVSFNLVTGPNMGG 564
+ TG + L Q RHPIVE G +I ND + ++ G+V F +VTGPNMGG
Sbjct: 649 IDQPRTG-ICLIQARHPIVEENLEGKQFIANDCFLENVSDSDDRLGQV-FIVVTGPNMGG 706
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTYIR++GV +A IGCFVP SA I++ D+I R+G+ D Q G+STFM EM ET++
Sbjct: 707 KSTYIRTVGVITLMAHIGCFVPAKSARIALTDRILCRIGSTDYQMFGVSTFMAEMLETSS 766
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
+++ + +SL+I+DELGRGT T +GFG+A SIA + H +FATHFHE+A L+
Sbjct: 767 ILRLASPSSLIIVDELGRGTCTEEGFGLAYSIAEYIVQHIGCPCMFATHFHELAFLADTF 826
Query: 685 P--TFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
P +NV +SA + L LY+V+ G C KS+G+H A++A +P +L+ A+D +
Sbjct: 827 PQGVVQNVHMSAEPDPETQKLQFLYKVEAGICDKSFGIHVAELARFPASVLQDAKDTVDR 886
Query: 741 YEYSLDTKTPSGDETNNREEE 761
E + SG++T + E++
Sbjct: 887 LEKYGIGEEDSGNKTCSSEKK 907
>gi|428168656|gb|EKX37598.1| Msh2 mismatch repair muts-like protein, meiosis and mitosis
[Guillardia theta CCMP2712]
Length = 982
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 258/864 (29%), Positives = 412/864 (47%), Gaps = 146/864 (16%)
Query: 3 FYLFF--FPQKSKTTIRFFNRV---EFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLE 56
F FF P+ + TIRFF R EFY HGEDA I ++ + + ++K +G K+ L
Sbjct: 54 FIAFFKNMPEPASRTIRFFYRKKEGEFYSCHGEDAVYIAQECFHTMSVLKHIG-KNNELP 112
Query: 57 TVLVNKSNLSCFSHILCVISE-------------------------------------DK 79
V V+ SN + F ++ +++E D
Sbjct: 113 AVAVSPSNFNSF--VVQLLTERQYRVEVWADVKGGKNGWTIIRQGSPGNLEEFEEIVFDT 170
Query: 80 TLETVLTNTV--------------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPK 125
ET T TV G+A D K + E D D +NLEA +V+ K
Sbjct: 171 CGETQETPTVVCVQIVSDGAGWRVGLAYCDNTLKIIGVCEFLDGDQLTNLEAALVRLGTK 230
Query: 126 ECLLPAEYLND--NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNA 183
EC+ + + K+ I DR V +T RK +FS +D+ QD+NRL+ + +L N
Sbjct: 231 ECVAAEDKMRSPVEGKKLREIFDRCDVVLTERKSRDFSTKDINQDLNRLLGPESCKLIN- 289
Query: 184 RLLPEMCLTTATHCLRSL---------------------INYLELMNNEDNMNQFSIHSI 222
+ E L++A +R L ++ +E +D S++++
Sbjct: 290 -MEDENALSSAACLIRYLDLLSDERKFKLQELKLDRYMKLDKVEKDEAQDGNRNMSVYTL 348
Query: 223 DYSKYVHMSSAVM----SSLHVLPQQGSTSAQTYDSLLG--------------------- 257
H+ S ++ + PQ+ T ++ +
Sbjct: 349 LNKCKTHIGSRLLLRWIKQPLLDPQEIETRLDLVETFVNDVQLRQSMQEIYLRHVPDLAR 408
Query: 258 ------ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
L+ C T +G L+ + M PLK L+ +++ + + E ++ HEY +
Sbjct: 409 LARKFQALEDCETSKGS-LMKEKMVDPLKSLEDDFKQYERLVEQSLDLEG-IDNHEYRIN 466
Query: 312 GLPDMQSLAMRIGRKKAGLKDC---------YRVYEGVSQLPKLISILESLVQNVEASNL 362
P+ + + R GR + +D Y + G L+ +V
Sbjct: 467 --PNYRQES-RKGRDREEFEDSGGERERWMFYLTFHGAV-----------LISSVWRRGR 512
Query: 363 NTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRITMKL 421
+ +L+ + + + +D + A +L L +K +KLE N + + +RIT K
Sbjct: 513 RSFEETLKGKRTDIQHEIFVDSSCSERKKAANKLGLGEEK-VKLERNKDKIYIFRITRKD 571
Query: 422 NNSIDDR---YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGY 478
+ + +++L+T + GV+F L + +Y+ Y Q S+VE+V+ + + Y
Sbjct: 572 EKVLRGKCGSFSVLETRKDGVKFTSTGLRPLSERYKEADDSYSEIQTSLVEKVVEVISTY 631
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV 538
+ LS+V+A+ DVLVS + ++ AP YVRP + P G G L+L + RHP VE+ V
Sbjct: 632 APAVESLSEVIAEIDVLVSLAHVASNAPTQYVRPLLSPAGQGDLILKESRHPCVEVMDDV 691
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
S+IPND+ ++TGPNMGGKSTYIR GV V +AQIG FVPC SA IS+ I
Sbjct: 692 SFIPNDIELLRSSSRLQIITGPNMGGKSTYIRQAGVIVLMAQIGSFVPCSSAEISICHSI 751
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
R+GA D+Q +G+STFM EM +T++++ T+ SL+IIDELGRGTST+DGFG+A +IA
Sbjct: 752 HARIGAGDNQLKGVSTFMQEMLDTSSILSSATDKSLIIIDELGRGTSTYDGFGLAWAIAE 811
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+AS + LFATHFHE+ L N V+A + L +LYQV+ G+C +S+G+
Sbjct: 812 HIASSIRAPCLFATHFHELTELEGKAEAVTNRHVTAHVADGKLTMLYQVRKGACDQSFGI 871
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H A++A +PE ++E AR ++ E
Sbjct: 872 HVAELAKFPEHVVEMARQKAEQLE 895
>gi|219886557|gb|ACL53653.1| unknown [Zea mays]
Length = 618
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/595 (34%), Positives = 314/595 (52%), Gaps = 64/595 (10%)
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
C G RLL +W+KQPL D++ I R V V + E R L + L+ + D+ L
Sbjct: 5 CTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPELRQGLRQ-QLKRISDIDRLTH 63
Query: 322 RIGRKKAGLKDCYRVYEGVSQLP-----------------------------------KL 346
+ +K A L+ ++Y+ S++P +
Sbjct: 64 SLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQFSTLIRSKFLEPLEEWMAKNRFGRF 123
Query: 347 ISILESLVQNVEASNLNTILSSLQSLKMMDRKD---AVMDKMKEYLESTARRLNLVADKT 403
S++E+ + + N +S L S + KD V + + TA L+L DK
Sbjct: 124 SSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELSVVENHINNLHVDTASDLDLSVDKQ 183
Query: 404 IKLENSPQGFAYRIT----MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQRE 459
+KLE G +R++ K+ + Y I++T + GV+F + +L + QYQA+ E
Sbjct: 184 LKLEKGSLGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGVKFTNSKLKNLSDQYQALFGE 243
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
Y + Q+ +V +V+ +S +++ + VL++ DVL SF+ +T P PYVRP +
Sbjct: 244 YTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVLQSFADLATSCPVPYVRPDITASDE 303
Query: 520 GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
G +VL RHP +E Q GV++IPND G+ F ++TGPNMGGKST+IR +GV+V +A
Sbjct: 304 GDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQVGVNVLMA 363
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+G FVPCD A+ISV D IF RVGA D Q G+STFM EM ETA+++K ++ SL+IIDE
Sbjct: 364 QVGSFVPCDQASISVRDCIFARVGAGDCQLHGVSTFMQEMLETASILKGASDKSLIIIDE 423
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR-------------VIPT 686
LGRGTST+DGFG+A +I L + TLFATHFHE+ L+ V
Sbjct: 424 LGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFHELTALAHRNDDEHQHISDIGVANY 483
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
+ L ++ L +LY+V+PG+C +S+G+H A+ A +PE ++ A+ E E
Sbjct: 484 HVGAHIDPLSRK--LTMLYKVEPGACDQSFGIHVAEFANFPEAVVALAKSKAAELEDFST 541
Query: 747 TKTPSG---DETNNREEEYFKT--VQEGEYQMFDFLQQCLSLS-KQKDTNRILHL 795
T T S DE ++ + F + G + FL++ +L + D ++IL +
Sbjct: 542 TPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFLEEFAALPMDEMDGSKILEM 596
>gi|403372692|gb|EJY86250.1| Putative mismatch repair protein [Oxytricha trifallax]
Length = 740
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 229/709 (32%), Positives = 356/709 (50%), Gaps = 67/709 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQ---KSPKECL-----LPAEYLNDNKNK 140
VG + ++++ + + E D++++S LE++I+Q SP +P + L K+K
Sbjct: 33 VGGSFINMNERSLLITEFMDNEHFSGLESLIIQLNNSSPDSKFKILVNMPTDIL---KDK 89
Query: 141 IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
+ IL +V K +FS + +N L++ E N +L E + A L +
Sbjct: 90 VQDILGMCEVEYVMGNKKDFSSNGIENTLNNLLK----ESYNYKL-EESEMDLALAALSA 144
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILD 260
I Y+ L + QFS+ S+Y+ + A + +L+V PQ + SL +L+
Sbjct: 145 AIEYMHLKTGKQK--QFSLKKYTLSQYLRLDVAALKALNVFPQSSEGVSGQGSSLYSLLN 202
Query: 261 RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLA 320
+ +T G RLL +W+KQP + D I +R A V+ L N R ++ L+ PD++ L
Sbjct: 203 QTKTSIGSRLLKKWLKQPTTNRDEINQRLAIVDYLYMNDHVRKDISAIHLKAFPDLEKLY 262
Query: 321 MRIGR------KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS--- 371
+ R A L DC +VY + L L L+ + + IL L+
Sbjct: 263 AKFYRVQMKLRNNAQLVDCVKVYNMIFTLEGLCKYLDESIMDENHPLRTVILDQLKGTLE 322
Query: 372 ----LKMM-----------------------DRK--DAVMDKMKEYLESTARRL--NLVA 400
LK M D K D ++K+K+ +E RR+ +L
Sbjct: 323 DFFKLKEMLEQCIDIGKAKQNDYIINPQFSPDLKQIDTDINKVKKKIEDLRRRVEDDLQC 382
Query: 401 DKTIKL-ENSPQGFAYRITMK------LNNSIDDRYTILDTVRGGVRFQDDRLATANTQY 453
+K + L E+ F + K N+ Y I+ + F L +Y
Sbjct: 383 NKPVNLIESQMHTFIFECDKKEGDAGMRNSHKKFNYKIISIKNKIMSFSVTELKDLVREY 442
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPC 513
++ Y Q +V +V+ I++ Y L Q+S +++Q DVL +F AS + Y +P
Sbjct: 443 NELEDNYRALQNELVMKVLEIASTYYPLLEQVSSLISQLDVLSAF--ASVSSTHQYCKPI 500
Query: 514 MKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
+ P G + L + +HP++ S I ND + + + ++TGPNMGGKSTYIR +
Sbjct: 501 ICPEGKEQIYLIESKHPLIHYIDPASCINNDCRMQKNQSNLQIITGPNMGGKSTYIRQVA 560
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
+ V LA IGCFVPC A I +VD I RVGA+D Q RGISTFM EM E + ++K T S
Sbjct: 561 ICVLLAHIGCFVPCAKAEIPIVDCIIARVGASDHQLRGISTFMAEMLEASCMLKTATNRS 620
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVS 693
L+I+DELGRGTST +GFG+A +IA +A+ F LFATHFHE+ + + +P +N VS
Sbjct: 621 LIIMDELGRGTSTNEGFGLAWAIAEYIATEINCFCLFATHFHEMTAMEKELPNVKNRYVS 680
Query: 694 ALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
AL D L +LY+VK G +SYG+H A+M +PE++L +A+ L E E
Sbjct: 681 ALAHGDQLTMLYKVKDGVIDRSYGIHVAEMLKFPEEVLREAKALASELE 729
>gi|221060208|ref|XP_002260749.1| DNA mismatch repair protein, Msh2p homologue [Plasmodium knowlesi
strain H]
gi|193810823|emb|CAQ42721.1| DNA mismatch repair protein, Msh2p homologue,putative [Plasmodium
knowlesi strain H]
Length = 810
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 226/789 (28%), Positives = 405/789 (51%), Gaps = 104/789 (13%)
Query: 70 HILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
ILC+ + K + TVGV + +F M E D+ Y++ LE++++QK P +C
Sbjct: 13 QILCLYIDTKKYQK----TVGVCFYNYLKYEFLMTEFIDNGYFTALESLLIQKRPYKCFF 68
Query: 130 PAEYLND--NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLP 187
+ +ND + +++ + + + ++ ++ +L +++ ++ +D +++N
Sbjct: 69 NS--MNDVVDDERLLNLFKMCNIEASTLERKKYDVSNLQEELKLIIPQND-DVRNYD--K 123
Query: 188 EMCLTTATHCLRSLINYLELMNNEDNMNQ--FSIHSIDYSKYVHMSSAVMSSLHVLPQQG 245
+ L A CL LIN+L++ N+D NQ +IH++D Y+ + A +S+L++LP +
Sbjct: 124 HLELQNACRCLMVLINHLKVKENKDIHNQCRINIHNMDL--YMRLDKAAISALNILPNKK 181
Query: 246 STSAQTYD-SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMN 304
+T++ + + SLL L++C T G++ L W+ QPL + I +R V + + + R N
Sbjct: 182 NTNSYSNNTSLLKFLNKCNTTIGYKKLVSWLTQPLTSVAEINKRLNIVETFIEDDDLRNN 241
Query: 305 LHEYALRGLPDMQSLAMRI----------GRKKAG----LKDCYRVY------------- 337
++ L+ +P++ L + G K LKD ++Y
Sbjct: 242 VYCNYLKRIPELDKLNHYLKEINQNNELKGNSKYNEEMILKDIVKLYYAILDFKEIYFSL 301
Query: 338 --------------------EGVSQLPKLISILESLV--QNVEASNLNTILSSL--QSLK 373
E ++ KL+ ++E + + +E + + I + + +
Sbjct: 302 VSIQGKHKQTIIEMVVNPLHEVLNNFSKLLDMIEMTIDLKEIEENKVYLISKNFDEELEQ 361
Query: 374 MMDRKDAVMDKMKEYLESTARRL-NLVADKTIKLEN---------SPQGFAYRITMKLNN 423
+ + K+A+M K+K + E L + V D+ K N + F +R++ K +
Sbjct: 362 ISNEKNALMKKIKRHKEEVEEDLFSDVCDRRYKRTNREDIRLVDCNTNVFLFRVSKKDFS 421
Query: 424 SIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE-------THQQSIVEEVIGISA 476
I + + VR + L + + +EYE T Q IV++ I +
Sbjct: 422 LIQHQKKCI-----SVRMNKNELLFTTKTLKGLCKEYEHCLNIYNTLQLEIVKKTICAVS 476
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
YT + + D+++ DVLVSF++ +P PYVRP + G ++++ + RHP++ELQ
Sbjct: 477 TYTPVIEKFIDIVSTLDVLVSFAVVCYNSPFPYVRPTVVE-GGENVIMKKSRHPLLELQH 535
Query: 537 GVS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
+S +IPND++ E +VTGPNMGGKSTYIR + LAQIG FVPCD + V
Sbjct: 536 NLSNFIPNDIHMNKKESRLIIVTGPNMGGKSTYIRQTAIICILAQIGMFVPCDVCEVPVF 595
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
Q+ RVGA+D Q +GISTF+ EM E + ++K +NS +I+DELGRGTST++G G++ S
Sbjct: 596 SQVMCRVGASDFQLKGISTFLSEMIEASAIVKNADQNSFIIVDELGRGTSTYEGLGISWS 655
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTF--RNVQVSALEQEDNLVLLYQVKPGSCV 713
I + + H + F LFATHFHEI+ ++ R+V+ + +++ + LY++K G+
Sbjct: 656 IGKYILDHIKCFCLFATHFHEISNIAYQCEGVINRHVETTIDQKQKKICFLYEIKDGASN 715
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLMKEYE-----------YSLDTKTPSGDETNNREEEY 762
KSYGV+ A++A P+D++E+A + ++E E ++DT + + N+ Y
Sbjct: 716 KSYGVNVAEIAKLPKDVIEKAYEKVEELESAENKYYLKEKLNIDTSSSINENYKNKISNY 775
Query: 763 FKTVQEGEY 771
K +E Y
Sbjct: 776 MKIKEEINY 784
>gi|124088618|ref|XP_001347169.1| DNA mismatch repair protein Msh2 [Paramecium tetraurelia strain
d4-2]
gi|145474183|ref|XP_001423114.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057558|emb|CAH03542.1| DNA mismatch repair protein Msh2, putative [Paramecium tetraurelia]
gi|124390174|emb|CAK55716.1| unnamed protein product [Paramecium tetraurelia]
Length = 794
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 208/715 (29%), Positives = 363/715 (50%), Gaps = 67/715 (9%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPK------ECLLPAEYLNDNKNKIV 142
+ A +D D + + E D++++S E +++Q +P L+ L K+
Sbjct: 23 LNCAFLDQDRRMIEVCEFQDNEHFSVFECLVLQVNPNGQDAKLTVLIQMPELESENRKVR 82
Query: 143 TILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
IL++ + + + K +FSE +L ++N++++ R+ ++C T C++ L+
Sbjct: 83 DILEQCEFEVIEKNKKDFSEINL-SNLNKVLK---KNFNTCRVEEQIC----TQCIQCLL 134
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST---SAQTYDSLLGIL 259
+ L ++ N +F+I ++ K++ + A +++L + P+QG S +L+ L
Sbjct: 135 EHTRLYKDDTNTQKFNIGLLNLHKFMRLDLAAINALMIFPKQGIKQFDSGNNASTLVDYL 194
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
DRC T G R L +W+K PL+ + I +R V L N+ R L+E L+ +PD+ L
Sbjct: 195 DRCITQMGKRCLRRWIKMPLQSIQEINQRLNIVEYLYQNSSFRQFLNEDFLKRIPDLDKL 254
Query: 320 AMRI------GRKKAGLKDCYRVYEGVSQLPKLISILE--------SLVQNVEASNLNTI 365
+ R A L DC +VY+ + ++ +I + S++Q +
Sbjct: 255 YAKFYKVASDKRNNANLSDCVKVYQLIQKIKDIIKRVNQEMYQSQNSILQEIFLKPFEEN 314
Query: 366 LSSLQSLKMMDRKDAVMDK-----------MKEYLESTAR------------RLNLVADK 402
LS + L+ M K + K E L ++ RL+ +
Sbjct: 315 LSDFEKLEEMIEKSIDLSKAYTGEFIVNPRFSEKLMQLSKNITQCMNDIENVRLDTETEL 374
Query: 403 TIKLENSPQGFAYRITMKLNNSIDD-------RYTILDTVRGGVRFQDDRLATANTQYQA 455
I + G I S D+ +Y + + F ++L + Y
Sbjct: 375 GITVTLIESGTYTYIFEAKKQSADEAFRKNPKKYKTISVKNRALTFTVEKLQSTVADYVH 434
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
+ Y+ QQ V+E++ I Y + Q S ++++ DVL +F+ + AP+ +VRP
Sbjct: 435 FRDLYQEVQQEKVQEILKIVCSYYPVMEQASRLISEIDVLSAFASVARNAPRAFVRPIFT 494
Query: 516 PMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
++L + RHP++E + I ND+ +++TGPNMGGKSTYIR I +
Sbjct: 495 E--KKEILLKESRHPLLEAIDS-TCIVNDLEMDRKSSRLHIITGPNMGGKSTYIRQIAIC 551
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
V LA IGCFVPC +A + V+D I TRVGA+D Q +GISTFM EM E + ++K +SL+
Sbjct: 552 VLLAHIGCFVPCTTAVVPVIDAIITRVGASDVQTKGISTFMSEMLEASCMLKTAKPDSLI 611
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
IIDELGRGTST +GFG+A +IA +A Q + LFATHFHE+ L+ I +N VS +
Sbjct: 612 IIDELGRGTSTSEGFGIAWAIAEHIAKQIQSYCLFATHFHEMTLMEHEITGVKNYYVSCV 671
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEYSLDT 747
++D + + Y+V+ G+ +SYG+ A+M +P+++++ A+ ++ +E++L++
Sbjct: 672 TEDDKITMEYRVRYGAVDRSYGLLVAQMLKFPKEVIDDAKQKAIELETFEHNLES 726
>gi|156102010|ref|XP_001616698.1| DNA mismatch repair enzyme [Plasmodium vivax Sal-1]
gi|148805572|gb|EDL46971.1| DNA mismatch repair enzyme, putative [Plasmodium vivax]
Length = 810
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 224/784 (28%), Positives = 396/784 (50%), Gaps = 94/784 (11%)
Query: 70 HILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
ILC+ + K + T+GV + +F M E D+ Y++ LE++ +QK P +C
Sbjct: 13 QILCLYIDTKKYQK----TLGVCFYNYLKYEFLMTEFIDNGYFTALESLFIQKRPYKCFF 68
Query: 130 PAEYLND--NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLP 187
+ +ND + +++ + + ++ ++ +L +++ ++ +D +++N
Sbjct: 69 NS--MNDLVDDERLLNLFKMCNIEAVALERKKYDVSNLKEELKLIIPQND-DVRNYD--K 123
Query: 188 EMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST 247
+ L A CL LIN+L++ N+D Q SI+ + Y+ + A +S+L++LP + +T
Sbjct: 124 HLELENACKCLMVLINHLKVKENKDIHYQCSINIHNMDLYMRLDKAAISALNILPNKKNT 183
Query: 248 SAQTYD-SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLH 306
++ + + SLL L++C T G + L W+ QPL + I +R V + + R +++
Sbjct: 184 NSYSNNTSLLKFLNKCNTTIGCKKLMSWLTQPLTSVSEINKRLNIVETFIEEDDLRNSVY 243
Query: 307 EYALRGLPDMQSLAMRI----------GRKKAG----LKDCYRVYEGVSQLPKLISILES 352
L+ +P++ L + G K LKD ++Y + ++ L S
Sbjct: 244 CNYLKRIPELDKLNHYLKEINQNNEIKGNSKYNEEMILKDIVKLYYAILDFKQIYFSLVS 303
Query: 353 L-------VQNVEASNLNTILSSLQSL------------------------------KMM 375
+ V + + L+ IL++ L ++
Sbjct: 304 IEGKHKQTVIEMVVNPLHEILNNFSKLLDMIEMTIDLKEIEENKVYLISKNFDEELEEIS 363
Query: 376 DRKDAVMDKMKEYLESTARRLNLVADKT-----------IKL-ENSPQGFAYRITMKLNN 423
+ K+A+M K+K + E R +L +DK I+L + + F +R++ K +
Sbjct: 364 NEKNALMKKIKRHKEDVER--DLFSDKCDRRYKRTNREDIRLVDCNTNVFLFRVSKKDST 421
Query: 424 SIDDRYTILDTV--RGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
I + + + F L QY+ Y T Q IV++ I + YT
Sbjct: 422 LIQHQKKCISVRMNKNEFLFTTSTLKGLCKQYEHCLNIYNTLQLEIVKKTICAVSTYTPV 481
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVS-Y 540
+ + DV++ DVLVSF++ +P PYVRP + G ++++ + RHP++ELQ +S +
Sbjct: 482 IEKFIDVVSTLDVLVSFAVVCYNSPFPYVRPTVVEDGE-NVIMKKSRHPLLELQHNLSNF 540
Query: 541 IPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFT 600
IPND++ E +VTGPNMGGKSTYIR + LAQIG FVPCD I V Q+
Sbjct: 541 IPNDIHMNKKESRLIIVTGPNMGGKSTYIRQTAIICILAQIGMFVPCDFCEIPVFSQVMC 600
Query: 601 RVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAREL 660
RVGA+D Q +GISTF+ EM E + ++K +NS +I+DELGRGTST++G G++ SI + +
Sbjct: 601 RVGASDFQLKGISTFLSEMIEASAIVKNADKNSFIIVDELGRGTSTYEGLGISWSIGKYI 660
Query: 661 ASHRQPFTLFATHFHEIALLSRVIPTF--RNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
H + F LFATHFHEI+ ++ R+V+ + +++ + LY++K G+ KSYGV
Sbjct: 661 LDHIKCFCLFATHFHEISNIAYQCEGVINRHVETTIDQKQKKICFLYEIKDGASNKSYGV 720
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE-----------YSLDTKTPSGDETNNREEEYFKTVQ 767
+ A++A P+D++++A + ++E E ++DT + + + N+ Y K
Sbjct: 721 NVAEIAKLPKDVIQRAYEKVEELESAENKYYLKEKLNIDTSSSTNENYKNKISNYMKIKD 780
Query: 768 EGEY 771
E Y
Sbjct: 781 EINY 784
>gi|349603513|gb|AEP99332.1| DNA mismatch repair protein Msh2-like protein, partial [Equus
caballus]
Length = 352
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 162/333 (48%), Positives = 229/333 (68%), Gaps = 3/333 (0%)
Query: 379 DAVMDKMKEYLESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTV 435
D + KM+ L S AR L L K IKL++S Q G+ +R+T K + + ++ +D
Sbjct: 20 DDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQ 79
Query: 436 RGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVL 495
+ GV+F + +L + N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +
Sbjct: 80 KNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAV 139
Query: 496 VSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFN 555
VSF+ S AP PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+
Sbjct: 140 VSFAHVSNGAPVPYVRPVILEKGQGRITLRASRHACVEVQDEVAFIPNDVHFEKDKQMFH 199
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
++TGPNMGGKSTYIR GV V +AQIGCFVPC+SA +++VD I RVGA DSQ +G+STF
Sbjct: 200 IITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVTIVDCILARVGAGDSQLKGVSTF 259
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M EM ETA++++ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFH
Sbjct: 260 MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH 319
Query: 676 EIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
E+ L+ IPT N+ V+AL E+ L +LYQVK
Sbjct: 320 ELTALANQIPTVNNLHVTALTTEETLTMLYQVK 352
>gi|290999727|ref|XP_002682431.1| DNA mismatch repair protein muts [Naegleria gruberi]
gi|284096058|gb|EFC49687.1| DNA mismatch repair protein muts [Naegleria gruberi]
Length = 909
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 214/729 (29%), Positives = 365/729 (50%), Gaps = 67/729 (9%)
Query: 71 ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
++C I K L +G+A D + D D +NL++ + Q KE L+
Sbjct: 141 VVCAIYIKKELNE---RKIGLAFADTTLRTIGFCSFTDSDQLANLDSTLSQIETKEALVF 197
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQ-DVNRLVRFDDSELKNARLLPEM 189
+ + + ++ +L R+ + T RKK++F ++ ++ D+ RL + + N E
Sbjct: 198 YQKNDPDSERLKDVLRRSNILETERKKSDFVKKSTLEADICRLT--GEERVMNLEFNEEH 255
Query: 190 CLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSA 249
+ +T L + L+ +NN + + S S ++ + S +SSL++LP S
Sbjct: 256 -VANSTQALLDYLELLDDINN---YSHYKTKSQQISLFMKLDSTCVSSLNILPPPNDRSK 311
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
T SL G+L++C T G RLL +W++QPL I +R V I E R + E
Sbjct: 312 NT--SLFGLLNQCVTRPGARLLREWIRQPLTSHSEIEKRLDMVQIFAEENELREEIKEL- 368
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------ESLVQNVEASNLN 363
L+ +PD+ + +R+ +++ ++D ++Y V Q+P + ++ +S V++ +L
Sbjct: 369 LKKVPDLDKILIRVVKQRVTIEDIVKLYICVQQVPAVKEVMNRVRNEKSFVKDNLYMDLM 428
Query: 364 TILSS----LQSL-----------------------------KMMDRKDAVMDKMKEYLE 390
L S LQS K+M+ + ++ + E +
Sbjct: 429 VHLDSNYADLQSFLQMVISIIDMEATEKHEYRINCKIDAELEKLMNDLNEIISQCDEECK 488
Query: 391 STARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDD--RYTILD-TVRGGVRFQDDRLA 447
S LN+ + LE + + +++ N++ YT++ + V+F +D L
Sbjct: 489 SVENDLNV---NELFLEMTKKSVCFKVKKAQANALTGATNYTLIGPQSKSDVKFTNDTLK 545
Query: 448 TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPK 507
Y I +YE+ Q ++++ + + QL + LA D+ +SF+ S A
Sbjct: 546 ELAKSYIDILEQYESKSQETLQKIREVVTTFAPAFTQLRETLASIDIFISFASVSVNAAI 605
Query: 508 PYVRPCMKPMG--TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGK 565
PY RP ++P+ ++L CRHP+VE+Q V + N + +L+TGPNMGGK
Sbjct: 606 PYTRPIIRPIDYEEEEIILYDCRHPVVEIQDSVDFKENTCILDRSQHQLHLITGPNMGGK 665
Query: 566 STYIRSIGVSVFLAQIGCFVPC-DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
ST+IR + ++V +AQIGCF+P + + ++V D I +RVGA+DS RGISTFM EM ETA
Sbjct: 666 STFIRQVAINVIMAQIGCFIPAREGSIVTVRDAILSRVGASDSTQRGISTFMAEMLETAA 725
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
++ T SL+I+DELGRGTST+DGFG+A +I L FTLFATHFHE+ L
Sbjct: 726 LLSTATSKSLIIVDELGRGTSTYDGFGLAYAIIEHLMDSTNAFTLFATHFHELRALIEKF 785
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGS------CVKSYGVHCAKMAGYPEDMLEQARDLM 738
P N ++ + ++ LV+LYQ+ + S+G+ AK+A +P D++ A
Sbjct: 786 PAICNERMDSKIIDNRLVMLYQIVTDNEEAITENSNSFGIEVAKLADFPIDVIRVAESKA 845
Query: 739 KEYEYSLDT 747
+E + ++T
Sbjct: 846 EEIKQLMNT 854
>gi|124808862|ref|XP_001348428.1| DNA mismatch repair protein Msh2p, putative [Plasmodium falciparum
3D7]
gi|23497322|gb|AAN36867.1|AE014820_17 DNA mismatch repair protein Msh2p, putative [Plasmodium falciparum
3D7]
gi|29650348|gb|AAO86764.1| DNA mismatch repair enzyme [Plasmodium falciparum]
Length = 811
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 218/750 (29%), Positives = 388/750 (51%), Gaps = 94/750 (12%)
Query: 70 HILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL 129
ILC+ + K + ++GV + +F M E D+ +++ LE++ +QK P +C
Sbjct: 13 QILCLYIDTKKYQK----SLGVCFYNYLKYEFLMTEFIDNGHFTALESLFIQKRPHKCFF 68
Query: 130 PA--EYLNDNKNKIVTILDRNKVCMTGR---KKNEFSEEDLMQDVNRLVRFDDSELKNAR 184
+ + ++D + +L+ K+C +K ++ +L ++ ++ +D +++N
Sbjct: 69 NSTNDLVDDER-----LLNLFKICNVQAIPLEKKKYDATNLKDELKLIISHND-DVRNYD 122
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQ--FSIHSIDYSKYVHMSSAVMSSLHVLP 242
+ L A CL LINYL+L N+D NQ +IH++D Y+ + A +S+L++LP
Sbjct: 123 --KHLELENACKCLMVLINYLKLKENQDIHNQCKINIHNMDL--YMRLDKAAISALNILP 178
Query: 243 QQGST-SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEA 301
+ + S SLL LD+C T G + L W+ QPL ++ I +R V + +A
Sbjct: 179 NKKNIHSYNNNTSLLKFLDKCNTTIGSKKLVSWLTQPLTNVAEINKRLNIVEFFIKEDDA 238
Query: 302 RMNLHEYALRGLPDMQSL-----------AMRIGRK---KAGLKDCYRVYEGV------- 340
R + L+ +P++ L +R+ K + LKD ++Y +
Sbjct: 239 RNVIFCNYLKRIPELDKLNHYLKEINQNNEIRVNSKYNEEMILKDIVKMYYSILDFKQIY 298
Query: 341 --------------------------SQLPKLISILESLV--QNVEASNLNTILSSLQS- 371
++ KL+ ++E + + V+ + + I +S +
Sbjct: 299 FTLKPIQGKNKETIDEIIINPLRDILNKFSKLLDMIEITIDLEEVQENKVYLISTSFDNE 358
Query: 372 LKMM-DRKDAVMDKMKEYLESTARRLNLVADK---TIKLEN---------SPQGFAYRIT 418
L+++ + K+A+M K+K++ + + ++ ADK T K N + F +R+T
Sbjct: 359 LEIIANEKNALMKKIKKHKDDVEK--DIFADKYDRTYKRANREDIRLVDCNTNVFLFRVT 416
Query: 419 MK---LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
K L +Y + + F + L QY Y T Q I+ + I
Sbjct: 417 KKDCGLVQQDKKKYMTVRMNKNEFLFTTNTLKNLCKQYDHCLNIYNTLQSEIINKTICAV 476
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQ 535
+ YT + + D+++ DVL+SFS+ +P PYVRP + G ++++ + RHP++ELQ
Sbjct: 477 STYTPVIEKFIDLVSTLDVLISFSVVCHNSPFPYVRPVIVDHGE-NVIMRKSRHPLLELQ 535
Query: 536 GGVS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
++ +IPND++ +VTGPNMGGKSTYIR + LAQIG FVPCD + +
Sbjct: 536 YNLNNFIPNDIHMNKKNSRLIIVTGPNMGGKSTYIRQTAIICILAQIGMFVPCDFCEVPI 595
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
QI RVGA+D Q +GISTF+ EM E A ++K +NS +I+DELGRGTST++G G++
Sbjct: 596 FTQIMCRVGASDFQLKGISTFLSEMIEAAAIVKNADQNSFIIVDELGRGTSTYEGLGISW 655
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTF--RNVQVSALEQEDNLVLLYQVKPGSC 712
SI + + + + F LFATHFHE++ ++ R+V+ + +++ + LY++K G+
Sbjct: 656 SIGKYILDNIKCFCLFATHFHEMSNIAYQCEGVINRHVETTIDKEKKKICFLYEIKDGAS 715
Query: 713 VKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYGV+ A++A P++++++A + ++E E
Sbjct: 716 NKSYGVNVAEIAKLPKEVIQKAYEKVEELE 745
>gi|66361202|ref|XP_627287.1| MutS like ABC ATpase involved in DNA repair [Cryptosporidium parvum
Iowa II]
gi|46228852|gb|EAK89722.1| MutS like ABC ATpase involved in DNA repair [Cryptosporidium parvum
Iowa II]
Length = 848
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 223/781 (28%), Positives = 384/781 (49%), Gaps = 124/781 (15%)
Query: 69 SHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL 128
+ I C I +T+ +G+++ D+++ + I D++ S LE+++V+ P +
Sbjct: 12 TRIFCSIVAK---QTITEPKLGISLFDVNSGLISVANIEDNEQLSELESLLVRTQPSNVV 68
Query: 129 LPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE 188
+ + ++ +LD N N ++ E++ + + +D E+ + LL
Sbjct: 69 YSVQKDCLSLKRLRNLLDMN---------NNWTCEEI--EFPKSSTVEDFEVIISPLLRR 117
Query: 189 MCLTTAT--------HCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV 240
C + H L +LI + +L+ +++N +Q I + ++ M SA + SL +
Sbjct: 118 SCSSYGKELESELIRHSLLNLIRHFQLVQSKENNSQCEIKFLVTKTFMRMDSACVQSLRI 177
Query: 241 LPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTE 300
P +G +S + + L G+L++ RT G R L QW++QPL D I+ R V N
Sbjct: 178 FPSKGESSKASTN-LFGLLNKTRTKVGARRLEQWLRQPLIDEKQIISRQDVVEFFCKNDF 236
Query: 301 ARMNLHEYALRGLPDMQSLAMRIG---------------RKKAGLKDCYRVYEGVSQLPK 345
R L+ +R + D+ +A+R K GL+D ++Y+ V Q
Sbjct: 237 LRQKLYGIHMRKVCDLDQIAVRFRTFASLMASESSKSEREPKFGLEDMVKLYDSVMQSGN 296
Query: 346 LIS-ILESLVQNVEASNLNTILSSLQSL--------------------KMMDRKDA---- 380
+ S I ++L +N + + + + S+ L K +D ++A
Sbjct: 297 IFSDIKDALEENKNSDSSPSFVQSVYDLILVPLESTLNRFKDYIRLVEKTIDLEEADKGN 356
Query: 381 ---------VMDKMKEYLESTARRL--------------------NLVADKTIKLENSPQ 411
++K+ E R++ + A + I+ E +
Sbjct: 357 YLIIPYFTPELEKLSEEKNRIQRKIEAHRKDLDAYLCRERGYNEGSREAVRVIRGEGADT 416
Query: 412 GFAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
+R+T + D R+ + + F+ + L + + + + +EY Q+ ++
Sbjct: 417 SLCFRVTRRDIEYFQDKKRFKQVRINKNDYIFRTNELMDLSDREEKVIKEYNNEQEQVLV 476
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP------C-----MKPMG 518
+ + +++ Y +++L+ +L DVL+SFS+ S CA P+VRP C MK
Sbjct: 477 KALSVASTYWSLVSRLAGILGSIDVLLSFSMTSLCAQIPFVRPKMVNGKCNLATEMKISE 536
Query: 519 TGSLVLN------QCRHPIVELQGGVS----YIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
GS N + RHP++E QG VS ++ NDV +++TGPNMGGKSTY
Sbjct: 537 DGSTNCNCRFYCKELRHPLIEAQGTVSTTGQFVANDVELHRHGNLLSIITGPNMGGKSTY 596
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR I + LAQIGCFVP A I ++DQ+ RVGA+D+Q GISTF EM E + +++
Sbjct: 597 IRQIAICSLLAQIGCFVPAQEAQIPIMDQLMCRVGASDAQILGISTFFAEMIEASAILRS 656
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR 688
TE +LVI+DELGRGTSTFDGFG+A SIA L S ++ +TLFATHFHE++ L+ P
Sbjct: 657 ATERTLVIVDELGRGTSTFDGFGLAWSIASYLVSEKKCYTLFATHFHELSSLASSTPNVT 716
Query: 689 NVQVSA-------LEQEDNLVL--LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMK 739
N++V+A L ++ + VL LY+V+ G KS GV A+++G P + ++++R+ +
Sbjct: 717 NLRVTASTSKALSLSKQGSGVLKFLYKVEKGFTDKSLGVDVAELSGLPSETVKRSREKAE 776
Query: 740 E 740
E
Sbjct: 777 E 777
>gi|340503635|gb|EGR30181.1| hypothetical protein IMG5_138850 [Ichthyophthirius multifiliis]
Length = 705
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 206/682 (30%), Positives = 351/682 (51%), Gaps = 69/682 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE----CLLPAEY--LNDNKNKIV 142
V AI++ D +KF + E D +++SN E+++VQ +P++ +L Y L K KI
Sbjct: 31 VSAAIINYDQRKFQITEFQDSEHFSNFESLLVQTNPQDQQTKFVLYINYPDLQTEKEKIQ 90
Query: 143 TILDRNKV-CMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
I+ + + + R+K F E++ +D+N+L++ L+ + E LT+A CL
Sbjct: 91 DIIGQCDIQSIQEREKKYFLEKNYTEDINKLLK---KSLQQH--IQESTLTSALQCLNCA 145
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST--------SAQTYD 253
+ +L ++ N QF++ +K++ + A +++L + P+Q + Q++
Sbjct: 146 VLDQQLSKDQSNFKQFTLEKFVLNKFMKLDLAAINALLIFPKQQDQYRKSLMGGAEQSFQ 205
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L+ +LD+C+T G RLL +W++QPL+D + I +R V L+ + R L LR +
Sbjct: 206 TLVDLLDKCKTQIGSRLLRRWIRQPLQDEEEINKRLDIVEYLIQKNDLRNYLQTDFLRKI 265
Query: 314 PDMQSLAMRI------GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
D+ L ++ + L DC +VY V + L LE+ +N + S N +L+
Sbjct: 266 ADLDKLYVKFYKVASNKKHNCNLSDCIKVYSLVENMNLLYQYLEN-QENTQISE-NQLLN 323
Query: 368 SLQSLKMMDRKDAVMDKMKEYLESTARRLNLVAD--------------KTIKLE-NS-PQ 411
L L+ K M K LE + + + KTI+ E NS Q
Sbjct: 324 PLFELQNQFNKLQSMIKQSIDLEKAKSQNEYMVNPMFSPALTEISKKMKTIQSEINSLKQ 383
Query: 412 GFAYRITMKL---------------NNSIDD--------RYTILDTVRGGVRFQDDRLAT 448
+A + +++ DD +Y I+ + + + + L +
Sbjct: 384 EYARELGVEIKIVDSNTHTYLFEGKKKETDDAFRRKNHQKYKIISMKKTTILYTTEDLQS 443
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+Y I EY Q+ +V++++ + + Y + S ++Q DVL +F+ +P
Sbjct: 444 LVAEYNCISDEYTQEQKQVVDKILAVVSSYYPAMENASSYISQLDVLSTFAQLVVNSPTK 503
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
Y +P ++ + + L QCRHP +E+ + +PND Y + F+++TGPNMGGKSTY
Sbjct: 504 YTKPDIQ-VQNNRINLVQCRHPCLEVVDN-NCVPNDCYMDKEKSRFHIITGPNMGGKSTY 561
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR + + V LA +GC++P + A + V+D I TRVGA+D Q RGISTFM EM E + ++K
Sbjct: 562 IRQVALCVLLAHVGCYIPAEKAEMPVIDAIITRVGASDMQIRGISTFMSEMLEASCMLKT 621
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR 688
+E SL+IIDELGRGT+T +GFG+A +I+ + Q F LFATHFHE+ + + +
Sbjct: 622 ASEKSLIIIDELGRGTATNEGFGLAWAISEYIVEKIQGFCLFATHFHEMTKMGKEMKGVV 681
Query: 689 NVQVSALEQEDNLVLLYQVKPG 710
N V + + L + Y+VK G
Sbjct: 682 NYYVDCVAVNNKLTMQYRVKEG 703
>gi|308485160|ref|XP_003104779.1| CRE-MSH-2 protein [Caenorhabditis remanei]
gi|308257477|gb|EFP01430.1| CRE-MSH-2 protein [Caenorhabditis remanei]
Length = 856
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 235/824 (28%), Positives = 402/824 (48%), Gaps = 109/824 (13%)
Query: 12 SKTTIRFFNRVEFYCVHGEDAELIQR---KSNVV---------------YLVKTMGQKDK 53
S TI F+R E++ V+GEDA + KS+V Y+ GQ +K
Sbjct: 21 SPNTIAIFSRGEYFTVYGEDANFVATNIFKSDVCVKTFTLCTTESQQMKYISVNRGQYEK 80
Query: 54 TL-ETVLVNKSNLSCFSH------------------------------ILCVI---SEDK 79
+ ETV++ + ++ ++ +L V ED
Sbjct: 81 VVRETVVLLRCSVELYASEQGEWKMIKRGSPGNTVEFEQEIGVADQAPVLAVYIHPGEDD 140
Query: 80 TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK- 138
+ + +N V + D + E D +S +E I P E L L +
Sbjct: 141 VCKKICSNRVTLCAWDSGNVRLVTSEFIDTPSFSQIEQCIFGLCPTEYYLINGALASPRI 200
Query: 139 NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCL 198
K+ + + V K + ++++ +++ R + + N + CL
Sbjct: 201 KKLSNMFTKMDVHCKQALKPKSEWQNMLDCIHQEYREEAEKQSN----------SVKECL 250
Query: 199 RSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD-SLLG 257
++L + + + N ++SI + + + S + +L + + ++ + +L
Sbjct: 251 QTL--HANVADEYRNSEKYSIFNYGTHGNMQIDSCAVDALELFQLNYNYLEKSNNLTLYN 308
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+L++C+T G +LL W+ +PL +D I ER V L+ N R L + L +PD
Sbjct: 309 VLNKCKTLPGEKLLRDWLSRPLCSIDHINERLDVVESLLGNQNVRQKLRDSFLARMPDCS 368
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLP----KLISILE-----SLVQNVEASNLNTILSS 368
LA R+ RK L+D R Y+ + L +LI + E + + + S + IL
Sbjct: 369 QLARRLMRK-CTLQDLNRFYQAATLLESVEMQLIQLSEDKRFSASIDRLLKSEVTAILKK 427
Query: 369 LQSLKMMDRKDAVMDKMKEYLESTAR---------------RLNLVADK----------- 402
++ +++ + D KE+ E R ++N +A+K
Sbjct: 428 VERFQVLCDEFFDFDYEKEHKEIRVRVDFVPEIQEISEKLDQVNKIAEKLRKKYSAKFEC 487
Query: 403 -TIKLE-NSPQGFAYRITMKLNNSIDDR-YTILDTVRG-GVRFQDDRLATANTQYQAIQR 458
++KL+ NS G+ +R+T+K SI + IL+T +G GV+F L+ N ++
Sbjct: 488 DSMKLDKNSQYGYYFRVTLKEEKSIRKKDVHILETTKGSGVKFTVGELSDINDEFLEFHL 547
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+Y +Q ++ + + + + ++ ++A DV VS + S+ + Y RP + P+G
Sbjct: 548 KYTRAEQEVITMLCNKAEEFIPLIPAMAQLIATLDVFVSLATFSSMSSGIYSRPELLPLG 607
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+ L L QCRHP++E +IPNDV + + ++TG NMGGKSTY+RS +S+ L
Sbjct: 608 SKLLELKQCRHPVIESISEKPFIPNDVILEKNRLI--ILTGANMGGKSTYLRSAALSILL 665
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQIGCFVPC SA ISVVD IFTRVGA+D Q +GISTFM EM + + ++++ TENS V+ID
Sbjct: 666 AQIGCFVPCSSAKISVVDGIFTRVGASDKQSQGISTFMAEMLDCSAILQRATENSFVVID 725
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
ELGRGTSTFDGFG+A +IA+++ + + ++FATHFHE+ L+ P +Q+ ++
Sbjct: 726 ELGRGTSTFDGFGIASAIAQDILNRIRCLSVFATHFHEMGKLAEQ-PGAVALQMGVQIEK 784
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ + +LY+V G S+G+ AKM G E ++ +A +L++ E
Sbjct: 785 NQIHMLYKVSEGVAQCSFGLKVAKMVGLDESVINKASELLEGLE 828
>gi|67623531|ref|XP_668048.1| MutS 2-related [Cryptosporidium hominis TU502]
gi|54659240|gb|EAL37827.1| MutS 2-related [Cryptosporidium hominis]
Length = 847
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 219/768 (28%), Positives = 376/768 (48%), Gaps = 121/768 (15%)
Query: 82 ETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKI 141
+T+ +G+++ D+++ + I D++ S LE+++V+ P + + + ++
Sbjct: 21 QTITEPKLGISLFDVNSGLISVANIEDNEQLSELESLLVRTQPSNVVYSVQKDCLSLKRL 80
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTAT------ 195
+LD N N ++ E++ + + +D E+ + LL C
Sbjct: 81 RNVLDMN---------NNWTCEEI--EFPKSSTVEDFEVIISPLLRRPCSNYGKELESEL 129
Query: 196 --HCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
L +LI + +L+ +++N +Q I + ++ M SA + SL + P +G +S + +
Sbjct: 130 IRQSLLNLIRHFQLVQSKENNSQCEIKFLVTKTFMRMDSACVQSLRIFPSKGESSKASTN 189
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
L G+L++ RT G R L QW++QPL D I+ R V N R L+ +R +
Sbjct: 190 -LFGLLNKTRTKVGARRLEQWLRQPLIDEKQIISRQDVVEFFCKNDFLRQKLYGIHMRKV 248
Query: 314 PDMQSLAMRIG---------------RKKAGLKDCYRVYEGVSQLPKLIS-ILESLVQNV 357
D+ +A+R K GL+D ++Y+ V Q + S I ++L +N
Sbjct: 249 CDLDQIAVRFRTFASLMASESSKSEREAKFGLEDMVKLYDSVMQSGNIFSDIKDALEENK 308
Query: 358 EASNLNTILSSLQSL--------------------KMMDRKDA------VMDKMKEYLES 391
+ + + + S+ L K +D ++A ++ LE
Sbjct: 309 NSDSSPSFVQSVYDLILVPLESTLNRFKDYIRLVEKTIDLEEADKGNYLIIPYFTPELEK 368
Query: 392 TARRLNLV---------------------------ADKTIKLENSPQGFAYRITMKLNNS 424
+ N + A + I+ E + +R+T +
Sbjct: 369 LSEEKNRIQCKIEAHRKDLDAYLCRERGYNEGSREAVRVIRGEGADTSLCFRVTRRDIEY 428
Query: 425 IDD--RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
D R+ + + F+ + L + + + + +EY Q+ ++ + + +++ Y +
Sbjct: 429 FQDKKRFKQVRINKNDYIFRTNELMDLSDREERVIKEYNNEQEQVLVKALSVASTYWSLV 488
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRP------C-----MKPMGTGSLVLN------ 525
++L+ +L DVL+SFS+ S CA P+VRP C MK GS N
Sbjct: 489 SRLAGILGSIDVLLSFSMTSLCAQIPFVRPKMVNGECNLATEMKISEDGSTNCNCRFYCK 548
Query: 526 QCRHPIVELQGGVS----YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 581
+ RHP++E QG VS ++ NDV +++TGPNMGGKSTYIR I + LAQI
Sbjct: 549 ELRHPLIEAQGTVSTTGQFVANDVELHRHGNLLSIITGPNMGGKSTYIRQIAICSLLAQI 608
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
GCFVP A I ++DQ+ RVGA+D+Q GISTF EM E + +++ TE +LVI+DELG
Sbjct: 609 GCFVPAQEAQIPIMDQLMCRVGASDAQILGISTFFAEMIEASAILRSATERTLVIVDELG 668
Query: 642 RGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA------- 694
RGTSTFDGFG+A SIA L S ++ +TLFATHFHE++ L+ P N++V+A
Sbjct: 669 RGTSTFDGFGLAWSIASYLVSEKKCYTLFATHFHELSSLASSTPNVTNLRVTASTSKVPS 728
Query: 695 LEQEDNLVL--LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
L ++ + VL LY+V+ G KS GV A+++G P + ++++R+ +E
Sbjct: 729 LSKQGSGVLKFLYKVEKGFTDKSLGVDVAELSGLPSETVKRSREKAEE 776
>gi|261333241|emb|CBH16236.1| DNA mismatch repair protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 951
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 205/631 (32%), Positives = 324/631 (51%), Gaps = 72/631 (11%)
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A+ L SL+ + N + F + + S ++ M +A + +LH++ ++
Sbjct: 284 ASRALESLLESAIDPFDSTNQHTFYLKHVIPSTFMKMDAAAIEALHIIHRKPEARGSMPT 343
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
S+ L+RC T G RL+ QW+ QPL+ ++ I +R + V I+V + R L LR
Sbjct: 344 SIYSWLNRCTTGMGSRLMQQWLLQPLRSIEDINQRLSLVQIMVESPILRDALITQVLRRC 403
Query: 314 PDMQSLAMRIGRKKAGLKD----------------CYRVYEGVSQ----LPKLISILESL 353
DM L ++ R+ LKD R Y G L ++ LE +
Sbjct: 404 TDMDRLNRKLQRRTVALKDLQSILVFANTVPLAVDVLRTYHGGHDSSLLLKGYVTPLEDI 463
Query: 354 VQNVEASNLNTILSSLQSLKMMD--RKDAVMDKMKEYLESTARRLNLVADKTIKLEN--- 408
+++ SNL T++++ L + R + D +LE +R NLV K I+ EN
Sbjct: 464 SEHL--SNLRTLINATVDLSDENTVRINPEFDDDLSFLER--QRQNLV--KAIEKENHRV 517
Query: 409 ----------------SPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATAN 450
+ G+ +R+ K ++ + + + T + GVRF +L++ +
Sbjct: 518 LKQCGWTEKQMKCEYHASYGYVFRVPRKDDHQVRTSKEFITVSTAKDGVRFVSGQLSSLS 577
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
QY+ I +Y+T QQ + ++++ A Y L+ ++LA DV ++++ + +P V
Sbjct: 578 EQYKGITEDYKTRQQVLKKKLVDTVATYLPVLDDAKELLAALDVFAAWALVVKDSSRPMV 637
Query: 511 RPCMKPMGT-------------GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLV 557
RP ++ + L + RHP+VEL+ ++ PN V + E + ++
Sbjct: 638 RPTVRATQSEEVKGNVDNNSDGAILTIVNARHPLVELRQP-AFTPNTVQL-TNEANALII 695
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNMGGKST++RSIGV V LAQ GCFVP DSA I V D I RVGA D +G+STFM+
Sbjct: 696 TGPNMGGKSTFMRSIGVCVALAQAGCFVPADSADIVVRDAIMCRVGATDHLAQGVSTFMV 755
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E+A ++ T+ +L I+DELGRGTST+DGFG+A +IA+E+A + + LF+THFHE+
Sbjct: 756 EMLESAAMLNSATQQTLAIVDELGRGTSTYDGFGLAWAIAQEVAVNAKSALLFSTHFHEM 815
Query: 678 ALLSRVIPTFRNVQVSA--LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
L+ RNV A L YQ++PG C +SYG++ A++A P+D+L+ AR
Sbjct: 816 TQLAARHTNVRNVHFGADVDTAARTLRFSYQLQPGPCGRSYGLYVAQLAHIPDDVLDSAR 875
Query: 736 DLMKEYEYSLDTKTPSGDETNNREEEYFKTV 766
E E GDET NR + F T
Sbjct: 876 QKAVELE------DFGGDETKNRAQALFSTA 900
>gi|71748512|ref|XP_823311.1| DNA mismatch repair protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832979|gb|EAN78483.1| DNA mismatch repair protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 951
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 205/631 (32%), Positives = 324/631 (51%), Gaps = 72/631 (11%)
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A+ L SL+ + N + F + + S ++ M +A + +LH++ ++
Sbjct: 284 ASRALESLLESAIDPFDSTNQHTFYLKHVVPSTFMKMDAAAIEALHIIHRKPEARGSMPT 343
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
S+ L+RC T G RL+ QW+ QPL+ ++ I +R + V I+V + R L LR
Sbjct: 344 SIYSWLNRCTTGMGSRLMQQWLLQPLRSIEDINQRLSLVQIMVESPILRDALITQVLRRC 403
Query: 314 PDMQSLAMRIGRKKAGLKD----------------CYRVYEGVSQ----LPKLISILESL 353
DM L ++ R+ LKD R Y G L ++ LE +
Sbjct: 404 TDMDRLNRKLQRRTVALKDLQSILVFANTVPLAVDVLRTYHGGHDSSLLLKGYVTPLEDI 463
Query: 354 VQNVEASNLNTILSSLQSLKMMD--RKDAVMDKMKEYLESTARRLNLVADKTIKLEN--- 408
+++ SNL T++++ L + R + D +LE +R NLV K I+ EN
Sbjct: 464 SEHL--SNLRTLINATVDLSDENTVRINPEFDDDLSFLER--QRQNLV--KAIEKENHRV 517
Query: 409 ----------------SPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATAN 450
+ G+ +R+ K ++ + + + T + GVRF +L++ +
Sbjct: 518 LKQCGWTEKQMKCEYHASYGYVFRVPRKDDHQVRTSKEFITVSTAKDGVRFVSGQLSSLS 577
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
QY+ I +Y+T QQ + ++++ A Y L+ ++LA DV ++++ + +P V
Sbjct: 578 EQYKGITEDYKTRQQVLKKKLVDTVATYLPVLDDAKELLAALDVFAAWALVVKDSSRPMV 637
Query: 511 RPCMKPMGT-------------GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLV 557
RP ++ + L + RHP+VEL+ ++ PN V + E + ++
Sbjct: 638 RPTVRAPQSEEVKGNVDNNSNGAILTIVNARHPLVELRQP-AFTPNTVQL-TNEANALII 695
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNMGGKST++RSIGV V LAQ GCFVP DSA I V D I RVGA D +G+STFM+
Sbjct: 696 TGPNMGGKSTFMRSIGVCVALAQAGCFVPADSADIVVRDAIMCRVGATDHLAQGVSTFMV 755
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E+A ++ T+ +L I+DELGRGTST+DGFG+A +IA+E+A + + LF+THFHE+
Sbjct: 756 EMLESAAMLNSATQQTLAIVDELGRGTSTYDGFGLAWAIAQEVAVNAKSALLFSTHFHEM 815
Query: 678 ALLSRVIPTFRNVQVSA--LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
L+ RNV A L YQ++PG C +SYG++ A++A P+D+L+ AR
Sbjct: 816 TQLAARHTNVRNVHFGADVDTAARTLRFSYQLQPGPCGRSYGLYVAQLAHIPDDVLDSAR 875
Query: 736 DLMKEYEYSLDTKTPSGDETNNREEEYFKTV 766
E E GDET NR + F T
Sbjct: 876 QKAVELE------DFGGDETKNRAQALFSTA 900
>gi|449018355|dbj|BAM81757.1| mutS family DNA mismatch repair protein MSH2 [Cyanidioschyzon
merolae strain 10D]
Length = 980
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 216/648 (33%), Positives = 332/648 (51%), Gaps = 92/648 (14%)
Query: 174 RFDDSELKNARLLPEM-CLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSS 232
R DD+ A L EM + AT C + +L+L ++ I + + + + + +
Sbjct: 328 RDDDAWRPEALTLDEMFSMKLATDCAHMCVRFLDLGQRVGERGRYRIEQLAWRQNLQLDA 387
Query: 233 AVMSSLHVL----PQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVER 288
A + +LHVL S S+ SL +LDRCRTP G RLL + +PL + +AI R
Sbjct: 388 AALKALHVLWGDETGPASPSSPPPGSLWCLLDRCRTPMGSRLLRTALIEPLGNREAIERR 447
Query: 289 HAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS 348
V +LV++ AR L +Y L+G D+ ++A R+ R K L+ R+Y+ + +LP L S
Sbjct: 448 LDLVELLVHDVIARQRLADYHLKGFADLITIARRLARDKTSLRQLVRLYQSLVRLPALRS 507
Query: 349 ILESLVQNVEASNLNTILSSLQSLK--MMDRKDAVMDKMKEYLESTAR------------ 394
LE L+ ++ T Q L+ + DR AV +E++E R
Sbjct: 508 ELEDLL----LAHTETRPRCCQVLRSDIADRLAAVAPAAQEFIEDVERFIDLERITNHEY 563
Query: 395 ----------------------RLNLVADKTI-----------------KLENSPQ-GFA 414
+N +TI KLE GF
Sbjct: 564 LLRPSMSTEMTQIRGEMDTCLEEMNRTYQQTIAALQQDDGVRGSGGDWLKLERKDGLGFC 623
Query: 415 YRITMKLNNSIDDR--YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVI 472
+R+T K I + T+L+T + GVRF L ++ Y A ++ Y Q+S + +V
Sbjct: 624 FRVTRKDEVCIRGKESITVLETRKDGVRFTTSALRRWSSAYTAAEQRYVAVQRSTLAQVF 683
Query: 473 GISAGYTQTLNQLSDVLAQFDVLVSFSIAST----CAPKPYVRPCMKPMGTGSLVLNQCR 528
G A Y L L VLA D+LV+F++ S C P+ + + ++L R
Sbjct: 684 GHFAKYASMLEVLGHVLALLDMLVAFAMISAERQFCRPRLVESDEFEAHESSGVILRGLR 743
Query: 529 HPIVEL--QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
HP+VEL QG +++ NDV L+TGPNMGGKS +RS+G++V +A GCFV
Sbjct: 744 HPLVELALQGEHTFVANDVVLTHPR-RLLLITGPNMGGKSVTLRSVGLAVLMAHCGCFVA 802
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
D+A++ VVD+I RVGA D Q RGISTFM EM + +T+++ T +SLV++DELGRGTST
Sbjct: 803 ADAASLPVVDRILVRVGAGDMQTRGISTFMAEMLDMSTILRHATSSSLVLVDELGRGTST 862
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR----NVQVSALEQEDN-- 700
+GFG+A ++ LAS R +TLFATHFHE+ L++ + R +V V+ + ++++
Sbjct: 863 AEGFGLAAALCEALAS-RASWTLFATHFHELTKLAQGAWSHRMLNAHVAVAQVHRDNDDS 921
Query: 701 -------------LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
LV LY+++PG +S+G+H A+MAG+P +++ AR
Sbjct: 922 EINDRGRGTPAASLVFLYELRPGPSERSFGIHIAEMAGFPHPVIDMAR 969
>gi|13027779|gb|AAK08648.1| putative mismatch repair protein MSH2 [Trypanosoma brucei]
Length = 951
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 205/631 (32%), Positives = 324/631 (51%), Gaps = 72/631 (11%)
Query: 194 ATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
A+ L SL+ + N + F + + S ++ M +A + +LH++ ++
Sbjct: 284 ASRALESLLESAIDPFDSTNQHTFYLKHVIPSTFMKMDAAAIEALHIIHRKPEARGSMPT 343
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
S+ L+RC T G RL+ QW+ QPL+ ++ I +R + V I+V + R L LR
Sbjct: 344 SIYSWLNRCTTGMGSRLMQQWLLQPLRSIEDINQRLSLVQIMVESPILRDALITQVLRRC 403
Query: 314 PDMQSLAMRIGRKKAGLKD----------------CYRVYEGVSQ----LPKLISILESL 353
DM L ++ R+ LKD R Y G L ++ LE +
Sbjct: 404 TDMDRLNRKLQRRTVALKDLQSILVFANTVPLAVDVLRTYHGGHDSSLLLKGYVTPLEDI 463
Query: 354 VQNVEASNLNTILSSLQSLKMMD--RKDAVMDKMKEYLESTARRLNLVADKTIKLEN--- 408
+++ SNL T++++ L + R + D +LE +R NLV K I+ EN
Sbjct: 464 SEHL--SNLRTLINATVDLSDENTVRINPEFDDDLSFLER--QRQNLV--KAIEKENHRV 517
Query: 409 ----------------SPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATAN 450
+ G+ +R+ K ++ + + + T + GVRF +L++ +
Sbjct: 518 LKQCGWTEKQMKCEYHASYGYVFRVPRKDDHQVRTSKEFITVSTAKDGVRFVSGQLSSLS 577
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
QY+ I +Y+T QQ + ++++ A Y L+ ++LA DV ++++ + +P V
Sbjct: 578 EQYKGITEDYKTRQQVLKKKLVDTVATYLPVLDDAKELLAALDVFAAWALVVKDSSRPMV 637
Query: 511 RPCMKPMGT-------------GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLV 557
RP ++ + L + RHP+VEL+ ++ PN V + E + ++
Sbjct: 638 RPTVRATQSEEVKGNVDNNSDGAILTIVNARHPLVELRQP-AFTPNTVQL-TNEANALII 695
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNMGGKST++RSIGV V LAQ GCFVP DSA I V D I RVGA D +G+STFM+
Sbjct: 696 TGPNMGGKSTFMRSIGVCVALAQAGCFVPADSADIVVRDAIMCRVGATDHLAQGVSTFMV 755
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E+A ++ T+ +L I+DELGRGTST+DGFG+A +IA+E+A + + LF+THFHE+
Sbjct: 756 EMLESAAMLNSATQQTLAIVDELGRGTSTYDGFGLAWAIAQEVAVNAKSALLFSTHFHEM 815
Query: 678 ALLSRVIPTFRNVQVSA--LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
L+ RNV A L YQ++PG C +SYG++ A++A P+D+L+ AR
Sbjct: 816 TQLAARHTNVRNVHFGADVDTAARTLRFSYQLQPGPCGRSYGLYVAQLAHIPDDVLDFAR 875
Query: 736 DLMKEYEYSLDTKTPSGDETNNREEEYFKTV 766
E E GDET NR + F T
Sbjct: 876 QKAVELE------DFGGDETKNRAQVLFSTA 900
>gi|397576511|gb|EJK50299.1| hypothetical protein THAOC_30749 [Thalassiosira oceanica]
Length = 874
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 201/615 (32%), Positives = 327/615 (53%), Gaps = 90/615 (14%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSA------QTYDSLLGILDRCRTPQGHRLLAQWMKQPLK 280
++ + ++H+LP + S +A +SL G+L++C+T G R L W++QPL
Sbjct: 216 HLAIDRTAAEAIHLLPPRSSGAALLQGGNDANNSLYGVLNQCKTKMGSRTLEVWLRQPLT 275
Query: 281 DLDAIVERHAAVNILVNNTEARMNLHE---YALRGLPDMQSLAMRI---GRKKA------ 328
DL+AI+ R AV L + + R L E +LRG+ D+ LA R+ GR KA
Sbjct: 276 DLEAIMRRQNAVAKLFDESIGRDRLREEGLASLRGM-DLDKLARRLTAYGRAKANGTPLG 334
Query: 329 ----GLKDCYRVYEGVSQ-LPKLISILESLVQNVE------------------------- 358
L+ Y+V++ + LP L+ +LE L N E
Sbjct: 335 STSKALESLYQVHQLANTCLPPLLEVLEELTGNDEQQDEENDCILNLAYQGLNKKCFELE 394
Query: 359 -ASNL------------NTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKT-- 403
AS+L N +++S + ++ D K A +D ++E LE+ +N ++
Sbjct: 395 KASDLAEKVIDFDEAPRNFLVNSTLNSELCDLK-ADLDGVQEELEALHADMNSQWEEIKG 453
Query: 404 ----IKLE------NSPQGFAYRITMK-----LNNSIDDRYTILDTVRGGVRFQDDRLAT 448
+KLE N+ + +R+ L+ ++ + ++ GV F L
Sbjct: 454 KSDQVKLEDVAEKGNTSCVWQFRLADSNAIKLLSTELNQDVKVSKILKNGVWFTTKELDQ 513
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
++ + + +Y+ Q++IV + ++A + + + S +LAQ DV+ S + + +
Sbjct: 514 LGSKKKGLMEDYQDKQRAIVVNCMSVAATFVPVIERCSVLLAQLDVIASLAHVAAYSSNG 573
Query: 509 YVRPCM---KPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGK 565
Y RP + + +G G + L + RHP VELQ +++I ND G SF LVTGPNMGGK
Sbjct: 574 YCRPQLTDGEEVGLG-IELKEARHPCVELQDDMNFIANDFNLVFGSSSFQLVTGPNMGGK 632
Query: 566 STYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATV 625
STYIRS+ V +AQIG FVPC +A I+++ + RVGA D+Q RGISTFM EM E++++
Sbjct: 633 STYIRSLAAIVTMAQIGSFVPCSAAKINIIHHLLARVGAGDAQDRGISTFMAEMLESSSI 692
Query: 626 IKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP 685
++ T+ SL+IIDELGRGTSTFDG+G+A +I+ + T+FATHFHE+ L
Sbjct: 693 LRTATKRSLIIIDELGRGTSTFDGYGLAKAISEHIVQKIGCITVFATHFHELTALEGQEA 752
Query: 686 TFRNVQVSA-LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR---DLMKEY 741
+ N VSA +++D L LY+V+PG C++S+G+ A+MA P ++ +A+ +++ +
Sbjct: 753 SVVNCHVSAHSDRQDGLTFLYEVRPGPCLESFGIAVAEMANMPPSVVNEAKRKARMLENF 812
Query: 742 EYSLDTKTPSGDETN 756
+Y + S DE N
Sbjct: 813 DYR--KRVKSSDEEN 825
>gi|17508445|ref|NP_491202.1| Protein MSH-2 [Caenorhabditis elegans]
gi|351060640|emb|CCD68358.1| Protein MSH-2 [Caenorhabditis elegans]
Length = 849
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 249/839 (29%), Positives = 403/839 (48%), Gaps = 120/839 (14%)
Query: 2 KFYLFFFPQKSKTTIRFFNRVEFYCVHGEDAELIQR---KSNVV---------------Y 43
K L KS TI F+R E++ V+G+DA + KS+V Y
Sbjct: 11 KALLKILKSKSPNTIAIFSRGEYFSVYGDDATFVATNIFKSDVCVKTFTLSTDNSQQMKY 70
Query: 44 LVKTMGQKDKTLETVLV----------------------NKSNLSCFSHILCVISEDKTL 81
+ GQ +K + +V + N F + V + L
Sbjct: 71 ISVNRGQYEKVVRETIVLLRCSVELYSSEQGEWKMTKRGSPGNTVDFEQEIGVSDQAPIL 130
Query: 82 ETVL-----TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAE-YLN 135
+ N V + D + + E D +S E I P E +L E +
Sbjct: 131 AIYIHPGDDDNRVTLCAWDAGNVRIVISEYIDTPSFSQTEQCIFGLCPTEYILVNEGSVA 190
Query: 136 DNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTAT 195
KI ++ R +V + K + D+++ V+ L D++E +N +
Sbjct: 191 PKAKKIASMFTRMEVHNKQQLKPKSQWSDVIESVH-LDYKDEAEKQNENI---------K 240
Query: 196 HCLRSLINYLELMNNEDNMNQFSI---HSI-DYSKYVHM--SSAVMSSLHVLPQQGSTSA 249
CL+ L + + +++SI +SI +Y + +M S + +L + +
Sbjct: 241 ECLQIL--------HSNAADEYSISEKYSIFNYGTHGNMLIDSCAVEALELFQLNYNYLE 292
Query: 250 QTYD-SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
++ + +L +L++C+T G +LL W+ +PL +D I ER V L N R L +
Sbjct: 293 KSNNLTLYNVLNKCKTLPGEKLLRDWLSRPLCQIDHINERLDIVEALFENQTIRQKLRDS 352
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEAS----NLNT 364
L +PD LA R+ RK L+D R Y+ + L ++ L+Q EA ++N
Sbjct: 353 ILARMPDCSQLARRLMRK-CTLQDLNRFYQAATLLE---TVEMQLIQLSEAEQFAPSINR 408
Query: 365 ILSS--LQSLKMMDRKDAVMDKM------KEYLESTAR---------------RLNLVAD 401
+L S + LK ++R + D+ KE E R ++ VA+
Sbjct: 409 LLKSEITEILKKVERFQVLCDEFFDFDYEKENKEIRVRVDFVPEIQEISEKLEQMERVAE 468
Query: 402 K------------TIKLE-NSPQGFAYRITMKLNNSIDDR-YTILDTVRG-GVRFQDDRL 446
K +KL+ NS GF +R+T+K SI + IL+T +G GV+F L
Sbjct: 469 KLRKKYSAKFECDNLKLDKNSQYGFYFRVTLKEEKSIRKKDVHILETTKGSGVKFSVGEL 528
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N ++ +Y ++ ++ + + + + ++ ++A DV VS S + +
Sbjct: 529 SDINDEFLEFHLKYTRAEEEVISMLCKKAEEFIPLIPAMAQLIATLDVFVSLSTFAATSS 588
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
Y RP + P+G+ L L QCRHP++E +IPNDV + ++TG NMGGKS
Sbjct: 589 GIYTRPNLLPLGSKRLELKQCRHPVIEGNSEKPFIPNDVVLD--KCRLIILTGANMGGKS 646
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TY+RS +S+ LAQIG FVPC SATISVVD IFTRVGA+D Q +GISTFM EM + + ++
Sbjct: 647 TYLRSAALSILLAQIGSFVPCSSATISVVDGIFTRVGASDKQSQGISTFMAEMLDCSAIL 706
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
++ T+NS V+IDELGRGTSTFDGFG+A +IA+++ + Q ++FATHFHE+ L+ P
Sbjct: 707 QRATKNSFVVIDELGRGTSTFDGFGIASAIAQDILNRIQCLSIFATHFHEMGKLAEQ-PG 765
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSL 745
+Q+ + + + +LY+V G S+G+ AKM G E+++ +A L++ E L
Sbjct: 766 AVALQMGVQIENNEIHMLYKVFEGVAQCSFGLQVAKMVGIDENVINKAAQLLEGLEKKL 824
>gi|260081895|gb|ACX31303.1| MSH2 [Trypanosoma cruzi]
Length = 960
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 196/637 (30%), Positives = 338/637 (53%), Gaps = 67/637 (10%)
Query: 152 MTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS-LINYL--ELM 208
+ GR++ ++ D + + ++R +PE L + L S I YL ++
Sbjct: 265 LQGRREGNVTKGDFLSALEDILR-----------VPEDRLALSNSPLASRAIEYLVSNII 313
Query: 209 NNEDNMNQFSI---HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+N D N + H+I S ++ + +A + +LH++ Q+ S+ L+RC T
Sbjct: 314 DNFDATNHRAFYLKHTIP-STFMKLDTAAIQALHIIHQKPEARGSLPTSVYSWLNRCVTG 372
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G R++ QW+ QPL++ + I +R + V ++V ++ R L LR DM L ++ R
Sbjct: 373 MGSRMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLSQVLRCCGDMDRLNRKLQR 432
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEASNLNTILSSLQSLKMM-- 375
+ LKD + V+ +P+ + +L + L+ + + L I +L+++
Sbjct: 433 RSIALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLEDINEHFSNLRILIT 492
Query: 376 ---------------DRKDAVMD------KMKEYLESTARRLNLV---ADKTIKLE-NSP 410
+ D +M+ + + +ES +RL V +K +K E ++
Sbjct: 493 ATVDLSDENTTRINPEFDDELMELEEQRKSVVKTIESEHQRLMKVYGWTEKQLKCEYHTT 552
Query: 411 QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
G+ +R+T K + + + T + GVRF +RL++ + QY+ I++ Y+ QQ +
Sbjct: 553 YGYVFRVTRKEDQQVRTSKELITVSTSKDGVRFVSERLSSLSEQYKGIRKVYDVRQQDLK 612
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP-------MGTGS 521
++++ Y L+ +++A DV V+++ +P P VRP ++ G S
Sbjct: 613 QKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVRPTIRTPETEEEQEGNKS 672
Query: 522 LV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L+ L RHP+VEL+ V Y PN + + + + ++TGPNMGGKST++RS+G+SV LAQ
Sbjct: 673 LITLINVRHPLVELRQPV-YTPNTLRL-TDDANALIITGPNMGGKSTFMRSVGISVVLAQ 730
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
GCFVP DSA + D + RVGA D +G+STFM+EM E+A ++ T +SL +IDEL
Sbjct: 731 AGCFVPADSADMVTRDAVMCRVGATDHLAQGVSTFMVEMLESAAILNAATRDSLAVIDEL 790
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ--E 698
GRGTST+DGFG+A +IA+E+A + LF+THFHE+ L+ RN A E
Sbjct: 791 GRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLAEHHTNVRNAHFGAEVNTVE 850
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
L Y+++PG C +SYG++ A++A PE++++ A+
Sbjct: 851 GTLRFSYRLEPGPCGRSYGLYVAQLANLPEEVVQSAK 887
>gi|313238586|emb|CBY13632.1| unnamed protein product [Oikopleura dioica]
Length = 890
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 217/752 (28%), Positives = 380/752 (50%), Gaps = 91/752 (12%)
Query: 64 NLSCFSHILCVISEDK--------TLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNL 115
NLSC H++ S D L+ + + +AIV+ + ++ ++ DD ++L
Sbjct: 122 NLSCVEHLVFDPSGDSYVPCTKIMGLKLLKGDRFSLAIVNAEDREVHVATFGDDPRLTDL 181
Query: 116 EAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRF 175
E++ +Q +E L+ A +K+ I +R V +T K+ F E + + +
Sbjct: 182 ESVFIQSQVREVLVTA-----TNDKLARIAERCSVMITKVSKSTF--EAPSAESCKTLFA 234
Query: 176 DDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVM 235
S +++A + C + + +L++ + F + ++ + + + S++
Sbjct: 235 KGSMIEDADQI---------GCFHAAVQFLKIATG---IGLFKVFPMNMANTMRLDSSIF 282
Query: 236 SSLHVLPQQGSTSAQTYDSLLGILD-RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNI 294
+LH+ + T SL IL C TP G R + QW+ QPL +I+ER V
Sbjct: 283 ENLHL-------CSDTEKSLFSILAMHCATPHGVRRVRQWITQPLMLEQSILERQNIVAA 335
Query: 295 LVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG--------LKDCYRVYEGVSQLPKL 346
L+ N + R L AL+GLPD+ +A ++ + G L+ R+++ ++P
Sbjct: 336 LIENGDIRERLSSVALKGLPDIARIAFKLKQLDTGKAINYKLALRSFGRIHDLCKRVP-- 393
Query: 347 ISILESLVQNVE------ASNLNTILSSLQSLKMM------------------------- 375
+I+E+L + + +S L+ + +Q L ++
Sbjct: 394 -TIMETLNETDDPIFEPISSPLSIVDGKIQKLILLFESHIDMTRNFSIKRGIDNDLDEQV 452
Query: 376 DRKDAVMDKMKEYLESTARRLNLVADKTIKLENSP---QGFAYRITMKLNNSI-----DD 427
++ + V+ +M E A L+L + +KL+++P G +R+T K + ++
Sbjct: 453 EKAEEVVARMAELSHDAADALDLPVSE-VKLDDAPVTIGGKVFRVTNKNDKAVLAAEKRG 511
Query: 428 RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSD 487
+T + T +G + F +RL + ++ + + IVE ++GI GYT+ L Q+ D
Sbjct: 512 TFTRVSTTKGAITFTSNRLQLLSDEFNEFNIHVQNLTRVIVERMLGIVLGYTKYLLQIGD 571
Query: 488 VLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYF 547
+ + D L++ S A+ + +P+ +P + + + RHPI+E Q V +PNDV
Sbjct: 572 ITSSLDALLALSHAALASSEPWTKPMFTE--KKEIEVEELRHPILESQL-VECVPNDVKM 628
Query: 548 KSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADS 607
S + ++TGPNMGGKST++RS+G+ LAQIG FVP SA I +VD I R+GA D+
Sbjct: 629 -SEDRRLMILTGPNMGGKSTFLRSVGLCSLLAQIGSFVPAASAQIPIVDTIIARIGAGDN 687
Query: 608 QYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPF 667
RGISTF EM ET T+ + TE SL++IDELGRGTST+DGFG+A +I+ + + +
Sbjct: 688 LQRGISTFQHEMIETETIFRCATERSLLLIDELGRGTSTWDGFGLAYAISEHIVTKIKSL 747
Query: 668 TLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYP 727
T FATH+HE+A L+ N+ S +++ + LY+V G C +SYG+ AK+AG+
Sbjct: 748 TFFATHYHEMASLASRCKGVFNMHTSVFVRDERITHLYKVSDGPCAQSYGIEIAKLAGFE 807
Query: 728 EDMLEQARDLMKE-YEYSLDTKTPSGDETNNR 758
++++A +L +E E + T D+ N R
Sbjct: 808 HGVIKRANELNEEKAEVEMALATAQLDDENWR 839
>gi|337743315|gb|AEI73154.1| MSH2 [Kryptolebias marmoratus]
Length = 545
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/496 (36%), Positives = 278/496 (56%), Gaps = 42/496 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
VGV VD +K + E PD + +SNLE+++VQ PKECLL + NK+ ++ R
Sbjct: 52 VGVGYVDAAQRKMGVCEFPDSEIFSNLESLLVQIGPKECLLAQGESGADGNKLREVVQRG 111
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
+ ++ RKK EF+ +D++QD+NRL+ E + LPE+ A CL +++ +LEL+
Sbjct: 112 GMLVSDRKKAEFNSKDIVQDLNRLLLSKRGETAASNTLPELDKQVAMSCLAAVVRFLELL 171
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQT-YDSLLGILDRCRTPQG 267
++E N N FS+ ++ +Y+ + A + +L++ QGS + SL G+L++CRTPQG
Sbjct: 172 SDESNFNSFSLTTLQLGQYMRLDHAAVRALNLF--QGSPDDTSGAHSLAGLLNKCRTPQG 229
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RL+ QW+KQPL D I ER V+ V ++E R E LR PD+ LA + R
Sbjct: 230 QRLVNQWIKQPLMDKTKIEERLDLVDGFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHT 289
Query: 328 AGLKDCYRVYEGVSQLPKLISILES-------LVQNVEAS---NLNTILSSLQSL----- 372
A L+DCYRV++ VSQLP L++ L+ L+Q V S +L T + Q +
Sbjct: 290 ATLQDCYRVHQAVSQLPGLVAALDRYSGSYQVLLQAVFTSPLRDLQTDFTKYQEMIETTL 349
Query: 373 ---------------------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSP 410
++ ++ DA+ M+ L S AR L L A KT+KLE N+
Sbjct: 350 DMNQIEHHEFLVKASFDPVLSELREKMDALEKSMQAALSSAARELGLEAGKTVKLESNAV 409
Query: 411 QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
GF R+T K S+ + ++T LD + GVRF + +L++ N +Y + EYE Q +IV
Sbjct: 410 LGFYLRVTCKEEKSLRNNKKFTTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIV 469
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+E+I I++GY L L+DV+AQ D + SF++A+ AP PYVRP + G L L Q R
Sbjct: 470 KEIINIASGYVDPLQALNDVVAQLDAVASFAVAAVSAPVPYVRPRILDGGCRRLELLQAR 529
Query: 529 HPIVELQGGVSYIPND 544
HP +E ++IPND
Sbjct: 530 HPCMETDADTAFIPND 545
>gi|209881111|ref|XP_002141994.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
gi|209557600|gb|EEA07645.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
Length = 845
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 245/832 (29%), Positives = 395/832 (47%), Gaps = 144/832 (17%)
Query: 63 SNLSCFSHILCVISEDKTLETVLTNTV-GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQ 121
SNL CF LC I+ L L+ V G++ + + F + EI D+D +S +E+++V+
Sbjct: 9 SNL-CF---LCSIA----LRVSLSGPVAGLSFFNNRSGTFSVCEISDNDQFSEIESLLVR 60
Query: 122 KSPKECLLPAEYLNDN------KNKI-----VTILDRNKVCMTGRKKNEFSEEDLMQDVN 170
P +L ND KN I T R+K C + + ++ ++
Sbjct: 61 NKPN--MLVYSIQNDQLGLRTFKNIIEMQNSTTEEIRSKTC---------TMDSIIDILS 109
Query: 171 RLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHM 230
L+R + E+ L +LINY L + +N + I + Y+ M
Sbjct: 110 PLLRRSHRSYR-----KELESDIIRESLYNLINYFRLNQSSENDGKCEIKFLLVDGYMRM 164
Query: 231 SSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHA 290
SA + SL + P +G S++ SL G+L++ RT G R L W++QPL DL+ I +R
Sbjct: 165 DSACIHSLKIFPVKGE-SSRVSTSLYGLLNKTRTAIGSRKLESWLRQPLTDLEIISKRQD 223
Query: 291 AVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK-----------------------K 327
V N R ++ LR + D+ ++ + R K
Sbjct: 224 IVEFFSENDILRQKIYGVYLRKVCDLDKISSKFRRVASINFEDIKSLKQSYRNSENLLLK 283
Query: 328 AGLKDCYRVYEGVSQLPKLIS-ILESLVQNVEASNLNT-ILSSLQSLKMMDRKDAVMDKM 385
L+D +VY+ +SQ + I ES+ + + L+ I+ S+ SL + ++ ++ K
Sbjct: 284 CTLEDVVKVYDSISQSTLMFKDITESISEMGASETLSKKIIDSIYSLILFPLEE-ILSKF 342
Query: 386 KEYL----------ESTARRLNLVADKTIKLE-----------------NSPQGFAY--- 415
K Y+ E+ +V+ T +LE + F Y
Sbjct: 343 KGYIQLVECTVDLDEANNGNYFVVSHFTPELEALSKEKERIKKNIESHRKEIEDFLYEER 402
Query: 416 --------RITMKLNNSIDDRYTILDTVRGGVRF-QDDRLAT------------------ 448
R +++ N D R + F QD R
Sbjct: 403 GQVNFDSNREAVRVLNEGTDNMLCFRVTRKDIEFFQDKRFKKVRINKNDYIFRTQELCKL 462
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+ Q +AI R Y Q ++ + I +++ Y + +LS++L DVL+SF++ S CAPK
Sbjct: 463 SEEQDEAISR-YNKAQTLVLTKTISVASTYWSLIEKLSNILGTIDVLLSFTLTSLCAPKR 521
Query: 509 YVRPCM---------KPMGTG-SLVLNQCRHPIVELQG--GVSYIPNDVYFKSGEVSFNL 556
+VRP + +P G L+ RHP+VE QG G +++ N+V +
Sbjct: 522 FVRPKITDGNCNNKEEPHKCGCRLICKNLRHPLVEAQGNLGTTFVANNVDMHRHGNLLTV 581
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNMGGKSTYIR I + L+QIGCFVP + A + ++ Q+ R+GA+D+Q GISTF
Sbjct: 582 ITGPNMGGKSTYIRQIAICTLLSQIGCFVPAEEAQLPIMHQLMCRIGASDAQLLGISTFF 641
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
EM E A +++ T +LVI+DELGRGTST+DGFG+A SIA L +Q +TLFATHFHE
Sbjct: 642 AEMIEAAAILRSATPQTLVIVDELGRGTSTYDGFGLAWSIASCLVKEKQSYTLFATHFHE 701
Query: 677 IALLSRVIPTFRNVQVS------ALEQEDN-LVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
+++L + N++V+ ALE+ +N L Y+V+ GS +S GV A+++G PE
Sbjct: 702 LSILEFAMENVTNLKVTAATKKRALEKNENILTFFYKVEKGSADESLGVDVAELSGLPEV 761
Query: 730 MLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCL 781
+++AR E E D + D + RE+ +T+ + +++ L++ L
Sbjct: 762 TIKRARQKASELE---DIERIYMDTSATREKR-IRTLTDISSKLYSGLRKIL 809
>gi|157874726|ref|XP_001685780.1| putative DNA mismatch repair protein [Leishmania major strain
Friedlin]
gi|68128853|emb|CAJ05982.1| putative DNA mismatch repair protein [Leishmania major strain
Friedlin]
Length = 939
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 211/730 (28%), Positives = 362/730 (49%), Gaps = 82/730 (11%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL-----------PAEYLN 135
T+G A ++ ++ E D +++L+A++ Q + KE LL A + +
Sbjct: 150 TTIGFAALNNTLRQLSFAEYTDTPQFTSLDALVAQTNLKELLLCVMTPAASAGAEATFSD 209
Query: 136 DNK-NKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDS-----ELKNARLLPEM 189
D++ + I +R V ++ R E + +Q V + ++ + RL E+
Sbjct: 210 DDRITAVRRICERCGVQLSVRTLREVQQ---LQKVEATAKGLEALAEILRVPEERLSLEL 266
Query: 190 CLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSA 249
C A + +++ +++M+ N F + S YV + SA + +L+++ ++
Sbjct: 267 C-PIARQAVENILGRIDVMD-PSNQRAFYLRRTVPSTYVKLDSAAIEALNLVSKKPEPRG 324
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
S+ L+RC T G R + QW+ QPL+ D I +R V + V N R
Sbjct: 325 TLPTSVFSWLNRCHTGMGARAMRQWLLQPLRCADDINQRLTMVELFVENPILRDMFTAQV 384
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ-------------- 355
L+ DM L ++ R+ LKD E V+ +P + +L +
Sbjct: 385 LKRCSDMDRLNRKLQRRSLALKDTQAFLEFVNVVPAALQVLGTYTGPQSKLLKDEYIAPM 444
Query: 356 ---NVEASNLNTILSSL------QSLKMMDRKDAVMDKMKEYLESTARRLNL-------- 398
N +NL T++ + +++M D + + E L ST R+++
Sbjct: 445 EDINDHMANLKTLIEATVDFGDRNAVRMNATFDDELQDLHEQLTSTQRQIDKEYSRVLSK 504
Query: 399 --VADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTIL--DTVRGGVRFQDDRLATANTQY 453
+K +K E + G+ +R++ K + + ++ T + GVRF +++A + QY
Sbjct: 505 YGWNEKQLKHEYHGTYGYVFRVSRKEDRQLRSTKELITVSTSKDGVRFVSEKMAALSEQY 564
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPC 513
+ I +YET Q + +++ A Y L+ +++A DV V++++ P+P VRP
Sbjct: 565 RRISDDYETRQMDLKRKLVDTIASYLPVLDDAKELIATLDVYVAWALVVKDCPRPMVRPV 624
Query: 514 MKPM-GTGSLV-----------------LNQCRHPIVEL-QGGVSYIPNDVYFKSGEVSF 554
++ GT +LV RHP+VEL Q G Y N ++ +
Sbjct: 625 VREAPGTVTLVKQEGTSARGADAAPLLSFKGLRHPLVELRQPG--YKANPLHLTTHTNGL 682
Query: 555 NLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIST 614
L+TGPNMGGKSTY+RS+GV+V LAQ GCFVP D+A + V D + RVGA D +G+ST
Sbjct: 683 -LITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQVRDAVMCRVGATDHLAQGVST 741
Query: 615 FMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHF 674
FM+EM E+A+++ T+++L I+DELGRGTST+DGFG+A +IA+++A + LF+THF
Sbjct: 742 FMVEMLESASILTGATQDTLAIVDELGRGTSTYDGFGLAWAIAQDVAVRVRATLLFSTHF 801
Query: 675 HEIALLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
HE+ L + +N+ A E L Y ++PG C +SYG++ A +A PE ++
Sbjct: 802 HELTQLPQQCSALQNMHFGAEVDESAGTLRFSYTLQPGPCGRSYGLYVASLAHLPEPVIA 861
Query: 733 QARDLMKEYE 742
A+ + E+E
Sbjct: 862 CAKVKVAEWE 871
>gi|407849323|gb|EKG04099.1| DNA mismatch repair protein MSH2, putative [Trypanosoma cruzi]
Length = 959
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 195/637 (30%), Positives = 338/637 (53%), Gaps = 67/637 (10%)
Query: 152 MTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS-LINYL--ELM 208
+ GR++ ++ D + + ++R +PE L + L S I YL ++
Sbjct: 264 LQGRREGNVTKGDFLSALEDILR-----------VPEDRLALSNSPLASRAIEYLVSNII 312
Query: 209 NNEDNMNQFSI---HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+N D N + H+I S ++ + +A + +LH++ Q+ S+ L+RC T
Sbjct: 313 DNFDATNHRAFYLKHTIP-STFMKLDTAAIQALHIIHQKPEARGSLPTSVYSWLNRCVTG 371
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G R++ QW+ QPL++ + I +R + V ++V ++ R L LR DM L ++ R
Sbjct: 372 MGSRMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLSQVLRCCGDMDRLNRKLQR 431
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEASNLNTILSSLQSLKMM-- 375
+ LKD + V+ +P+ + +L + L+ + + L I +L+++
Sbjct: 432 RSIALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLEDINEHFSNLRILIT 491
Query: 376 ---------------DRKDAVMD------KMKEYLESTARRLNLV---ADKTIKLE-NSP 410
+ D +M+ + + +ES +RL V +K +K E ++
Sbjct: 492 ATVDLSDENTTRINPEFDDELMELEEQRKSVVKAIESEHQRLMKVYGWTEKQLKCEYHTT 551
Query: 411 QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
G+ +R+T K + + + T + GVRF +RL++ + Q++ I++ Y+ QQ +
Sbjct: 552 YGYVFRVTRKEDQQVRTSKELITVSTSKDGVRFVSERLSSLSEQHKGIRKVYDVRQQDLK 611
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP-------MGTGS 521
++++ Y L+ +++A DV V+++ +P P VRP ++ G S
Sbjct: 612 QKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVRPTIRTPETEEEQEGNKS 671
Query: 522 LV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L+ L RHP+VEL+ V Y PN + + + + ++TGPNMGGKST++RS+G+SV LAQ
Sbjct: 672 LITLINVRHPLVELRQPV-YTPNTLRL-TDDANALIITGPNMGGKSTFMRSVGISVVLAQ 729
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
GCFVP DSA + D + RVGA D +G+STFM+EM E+A ++ T +SL +IDEL
Sbjct: 730 AGCFVPADSADMVTRDAVMCRVGATDHLAQGVSTFMVEMLESAAILNAATRDSLAVIDEL 789
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ--E 698
GRGTST+DGFG+A +IA+E+A + LF+THFHE+ L+ RN A E
Sbjct: 790 GRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLAEHHTNVRNAHFGAEVNTVE 849
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
L Y+++PG C +SYG++ A++A PE++++ A+
Sbjct: 850 GTLRFSYRLEPGPCGRSYGLYVAQLANLPEEVVQSAK 886
>gi|398021407|ref|XP_003863866.1| DNA mismatch repair protein, putative [Leishmania donovani]
gi|322502100|emb|CBZ37183.1| DNA mismatch repair protein, putative [Leishmania donovani]
Length = 939
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 213/729 (29%), Positives = 359/729 (49%), Gaps = 80/729 (10%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL----PAEYL-------- 134
+G A ++ ++ E D ++L+A++ Q + KE LL PA
Sbjct: 150 TAIGFAALNNTLRQLTFAEYTDTPQLTSLDALVAQTNLKELLLCVMSPAASAGAEATFND 209
Query: 135 NDNKNKIVTILDRNKVCMTGRKKNEF----SEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
+D + I +R V ++ R E EE + + L + RL E+C
Sbjct: 210 DDRITAVRRICERCGVQLSVRSLREIQQLQKEEAAAKGLEALAEI--LRVPEERLSLELC 267
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQ 250
A + +++ +++M+ N F + S Y+ + SA + +L+++ ++
Sbjct: 268 -PIARQAVENILGRIDVMD-PSNRRAFYLRRTVPSTYMKLDSAAIEALNLVSKKPEPRGT 325
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
S+ L+RC T G R + QW+ QPL+ D I +R V + V N R L
Sbjct: 326 LPTSVFSWLNRCHTGMGARAMRQWLLQPLRCADDINQRLTMVELFVENPILRDMFTTQVL 385
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ--------------- 355
+ DM L ++ R+ LKD E V+ +P + +L +
Sbjct: 386 KRCGDMDRLNRKLQRRSLALKDTQAFLEFVNVVPAALQVLGTYTGPQSKLLKDEYIAPME 445
Query: 356 --NVEASNLNTIL------SSLQSLKMMDRKDAVMDKMKEYLESTARRLNL--------- 398
N +NL T++ S +++M D + + E L ST R+++
Sbjct: 446 DINDHMANLKTLIEATVDFSDRNAVRMNAAFDDELQALHEQLTSTQRQIDKEYGRVLSKY 505
Query: 399 -VADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTIL--DTVRGGVRFQDDRLATANTQYQ 454
+K +K E + G+ +R++ K + + ++ T + GVRF +++A + QY+
Sbjct: 506 GWNEKQLKHEYHGTYGYVFRVSRKEDRQLRSTKELITVSTSKDGVRFVSEKMAALSEQYR 565
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
I +YET Q + +++ A Y L+ +++A DV V++++ P+P VRP +
Sbjct: 566 RISDDYETRQMDLKRKLVDTIASYLPVLDDAKELIATLDVFVAWALVVKDCPRPMVRPAV 625
Query: 515 KPM-GTGSLV-----------------LNQCRHPIVEL-QGGVSYIPNDVYFKSGEVSFN 555
+ GT +LV + RHP+VEL Q G Y N ++ + + +
Sbjct: 626 REAPGTVALVKQEGTSARGADAAPVLSFKRLRHPLVELRQPG--YKANPLHLTT-QTNGL 682
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
L+TGPNMGGKSTY+RS+GV+V LAQ GCFVP D+A + V D + RVGA D +G+STF
Sbjct: 683 LITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQVRDAVMCRVGATDHLAQGVSTF 742
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M+EM E+A+++ T+++L IIDELGRGTST+DGFG+A +IA+++A + LF+THFH
Sbjct: 743 MVEMLESASILTGATQDTLAIIDELGRGTSTYDGFGLAWAIAQDVAVRVRATLLFSTHFH 802
Query: 676 EIALLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQ 733
E+ L + +N+ A E L Y ++PG C +SYG++ A +A PE ++
Sbjct: 803 ELTQLPQQCSALQNMHFGAEVDESAGTLRFSYTLQPGPCGRSYGLYVASLAHLPESVIAC 862
Query: 734 ARDLMKEYE 742
A+ + E+E
Sbjct: 863 AKVKVAEWE 871
>gi|71665822|ref|XP_819877.1| DNA mismatch repair protein MSH2 [Trypanosoma cruzi strain CL
Brener]
gi|70885197|gb|EAN98026.1| DNA mismatch repair protein MSH2, putative [Trypanosoma cruzi]
Length = 960
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 192/632 (30%), Positives = 337/632 (53%), Gaps = 61/632 (9%)
Query: 154 GRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDN 213
GR++ ++ D + + ++R + RL C A+ + L++ +++N D
Sbjct: 267 GRREGNVTKGDFLSALEDILRVPED-----RLALSNC-PLASRAIEYLVS--NIIDNFDA 318
Query: 214 MNQFSI---HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRL 270
N + H+I S ++ + +A + +LH++ Q+ S+ L+RC T G R+
Sbjct: 319 TNHRAFYLKHTIS-STFMKLDTAAIQALHIIHQKPEARGSLPTSVYSWLNRCVTGMGSRM 377
Query: 271 LAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGL 330
+ QW+ QPL++ + I +R + V ++V ++ R L LR DM L ++ R+ L
Sbjct: 378 MRQWLLQPLRNAEEINQRLSLVELMVEDSILRDALLSQVLRCCGDMDRLNRKLQRRSIAL 437
Query: 331 KDCYRVYEGVSQLPKLISILES--------LVQNVEASNLNTILSSLQSLKMM------- 375
KD + V+ +P+ + +L + L+ + + L I +L+++
Sbjct: 438 KDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLEDINEHFSNLRILITATVDL 497
Query: 376 ----------DRKDAVMD------KMKEYLESTARRLNLV---ADKTIKLE-NSPQGFAY 415
+ D +M+ + + +ES +R+ V +K +K E ++ G+ +
Sbjct: 498 SDENTTRINPEFDDELMELEEQRKSVVKAIESEHQRVMKVYGWTEKQLKCEYHTTYGYVF 557
Query: 416 RITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIG 473
R+T K + + + T + GVRF +RL++ + QY+ I++ Y+ QQ + ++++
Sbjct: 558 RVTRKEDQQVRTSKELITVSTSKDGVRFVSERLSSLSEQYKGIRKVYDVRQQDLKQKLVS 617
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP-------MGTGSLV-LN 525
Y L+ +++A DV V+++ +P P VRP ++ G SL+ L
Sbjct: 618 TVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVRPTIRTPETEEEQEGNKSLITLL 677
Query: 526 QCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RHP+VEL+ V Y PN ++ + + + ++TGPNMGGKST++RS+G+ V LAQ GCFV
Sbjct: 678 NVRHPLVELRQPV-YTPNTLHL-TDDANALIITGPNMGGKSTFMRSVGICVVLAQAGCFV 735
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P DSA + D + RVGA D +G+STFM+EM E+A ++ T +SL IIDELGRGTS
Sbjct: 736 PADSADMVTRDAVMCRVGATDHLAQGVSTFMVEMLESAAILNAATRDSLAIIDELGRGTS 795
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ--EDNLVL 703
T+DGFG+A +IA+E+A + LF+THFHE+ L+ RN A E L
Sbjct: 796 TYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLAEHHTNVRNAHFGAEVNTVEGTLRF 855
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
Y+++PG C +SYG++ A++A PE++++ A+
Sbjct: 856 SYRLEPGPCGRSYGLYVAQLANLPEEVVQSAK 887
>gi|154343732|ref|XP_001567810.1| putative DNA mismatch repair protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065144|emb|CAM40570.1| putative DNA mismatch repair protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 940
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 211/726 (29%), Positives = 356/726 (49%), Gaps = 78/726 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL---------PAEYLNDNKN 139
+G A ++ ++ E D ++L+A++ Q + KE LL E D+ +
Sbjct: 153 IGFAALNNTLRQLSFAEYTDTPQLTSLDALVAQTNLKELLLCVMSPTASAGGEANLDDDD 212
Query: 140 KIVT---ILDRNKVCMTGRKKNEFSE----EDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+I I +R V ++ R E + E + + L + RL E+C
Sbjct: 213 RITAVRRICERCGVQLSVRTLREVQQLQTREASAKGIEALAEI--LRVPEERLPLELC-P 269
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A H + ++++ +++M++ N F + I S YV + SA + +L+++ ++
Sbjct: 270 IARHAVENILSRIDVMDS-SNQRAFYLRRIVPSTYVKLDSAAIEALNLVSKKPEPRGSLP 328
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
S+ L+RC T G R + QW+ QPL+ +D I +R V + V N R L+
Sbjct: 329 TSVFSWLNRCHTGMGARAMRQWLLQPLRCVDDINQRLTMVELFVENPILRDMFTAQVLKR 388
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ----------------- 355
DM L ++ R+ LK+ E V+ +P + L +
Sbjct: 389 CGDMDRLNRKLQRRSLALKETQAFLEFVAVVPAALQTLSTYTGPQSKLLKDEFIAPMEDI 448
Query: 356 NVEASNLNTIL------SSLQSLKMMDRKDAVMDKMKEYLESTARRL----NLVA----- 400
N NL T++ S +++M D + + E L +T R++ N V
Sbjct: 449 NEHMKNLKTLIEATVDFSDRNAVRMNATFDDELQDLHEQLTATQRQIEKEYNHVLSKYGW 508
Query: 401 -DKTIKLE-NSPQGFAYRITMKLNNSIDDRYTI--LDTVRGGVRFQDDRLATANTQYQAI 456
+K +K E + G+ +R++ K + + + L T + GVRF +++A + QY+ +
Sbjct: 509 NEKQLKYEYHGTYGYVFRVSRKEDRQLRSAKELITLSTSKDGVRFVSEKMAVLSEQYRRV 568
Query: 457 QREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP 516
+YET Q + +++ A Y L+ +++A DV V++++ P+P VRP ++
Sbjct: 569 SADYETRQMDLKRKLVDTIASYLPVLDDAKELIATLDVYVAWALVVRDCPRPMVRPVLRE 628
Query: 517 MGTGSLVLNQ------------------CRHPIVELQGGVSYIPNDVYFKSGEVSFNLVT 558
++ Q RHP+VEL+ Y N ++ + L+T
Sbjct: 629 APEPVTLVKQEGAVVRSADSAPLLSFKGLRHPLVELRLP-GYKANSLHLTTHTNGL-LIT 686
Query: 559 GPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMME 618
GPNMGGKSTY+RS+GV+V LAQ GCFVP D+A + V D + RVGA D +G+STFM+E
Sbjct: 687 GPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQVRDAVMCRVGATDHLAQGVSTFMVE 746
Query: 619 MKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIA 678
M E+A +I T +L I+DELGRGTST+DGFG+A +IA+++A+ + LF++HFHE+
Sbjct: 747 MLESAAIISGATSETLAIVDELGRGTSTYDGFGLAWAIAQDVAARVRATLLFSSHFHELT 806
Query: 679 LLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
L + +NV A E L Y ++PG C +SYG++ A +A PE ++E A+
Sbjct: 807 QLPQQCGALQNVHFGAEVDEAAGTLRFSYTLQPGPCGRSYGLYVASLAHLPESVIECAKV 866
Query: 737 LMKEYE 742
E+E
Sbjct: 867 KAAEWE 872
>gi|407409912|gb|EKF32562.1| DNA mismatch repair protein MSH2, putative [Trypanosoma cruzi
marinkellei]
Length = 960
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 195/611 (31%), Positives = 327/611 (53%), Gaps = 56/611 (9%)
Query: 178 SELKNARLLPEMCLTTATHCLRS-LINYL--ELMNNEDNMNQFSI---HSIDYSKYVHMS 231
S L++ +PE L ++ L S I YL +++N D N + H+I S ++ +
Sbjct: 280 SALEDILRVPEDRLALSSCPLASRAIEYLVSNIIDNFDATNHRAFYLKHTIP-STFMKLD 338
Query: 232 SAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAA 291
+A + +LH++ Q+ S+ L+RC T G R++ QW+ QPL++ + I +R +
Sbjct: 339 TAAIQALHIIHQKPEARGSLPTSVYSWLNRCVTGMGSRMMRQWLLQPLRNAEDINQRLSL 398
Query: 292 VNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE 351
V ++V ++ R L LR DM L ++ R+ LKD + V+ +P+ + +L
Sbjct: 399 VELMVEDSILRDALLSQVLRCCGDMDRLNRKLQRRSIALKDLQSILTFVNTIPRAVQVLR 458
Query: 352 S--------LVQNVEASNLNTILSSLQSLKMM-----DRKDAVMDKMK-----EYLESTA 393
S L+ + + L I +L+++ D D ++ E +E
Sbjct: 459 SHQGGRNDKLLMDEYIAPLEDINEHFSNLRILITATVDLSDENTTRINPEFDDELMELEE 518
Query: 394 RRLNLV----------------ADKTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDT 434
+R ++V +K +K E ++ G+ +R+T K + + + T
Sbjct: 519 QRKSVVKAIESEHQRVMKLYGWTEKQLKCEYHTTYGYVFRVTRKEDQQVRTSKELITVST 578
Query: 435 VRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDV 494
+ GVRF +RL++ + QY+ I++ Y+ QQ + ++++ Y L+ +++A DV
Sbjct: 579 SKDGVRFVSERLSSLSEQYKGIRKVYDVRQQDLKQKLVSTVVTYLPVLDDAKELIAALDV 638
Query: 495 LVSFSIASTCAPKPYVRPCMKP-------MGTGSLV-LNQCRHPIVELQGGVSYIPNDVY 546
V+++ +P P VRP ++ G SL+ L RHP+VEL+ V Y PN +
Sbjct: 639 FVAWATVVRDSPHPMVRPTIRSPETKEEQEGNKSLITLINVRHPLVELRQPV-YTPNTLR 697
Query: 547 FKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAAD 606
+ + + ++TGPNMGGKST++RS+G+ V LAQ GCFVP DSA + D + RVGA D
Sbjct: 698 L-TDDANALIITGPNMGGKSTFMRSVGICVVLAQAGCFVPADSADMVTRDAVMCRVGATD 756
Query: 607 SQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQP 666
+G+STFM+EM E+A ++ T +SL IIDELGRGTST+DGFG+A +IA+E+A +
Sbjct: 757 HLAQGVSTFMVEMLESAAILNAATRDSLAIIDELGRGTSTYDGFGLAWAIAQEVAVKARS 816
Query: 667 FTLFATHFHEIALLSRVIPTFRNVQVSALEQ--EDNLVLLYQVKPGSCVKSYGVHCAKMA 724
LF+THFHE+ LS RN A E L Y+++PG C +SYG++ A++A
Sbjct: 817 ALLFSTHFHEMTQLSEHHSNVRNAHFGADVNTVEGTLRFSYRLEPGPCGRSYGLYVAQLA 876
Query: 725 GYPEDMLEQAR 735
PE++++ A+
Sbjct: 877 NLPEEVVQSAK 887
>gi|350644504|emb|CCD60770.1| hypothetical protein Smp_199070 [Schistosoma mansoni]
Length = 779
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 240/379 (63%), Gaps = 17/379 (4%)
Query: 373 KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSID--DRY 429
++ ++ D + +++++ A+ LNL +K+IKLE N G+ R+T+K + +
Sbjct: 301 EIRNKLDNLEERIRDEFRRCAKILNLEQNKSIKLESNELHGYFMRVTLKDEKCLRGLKTF 360
Query: 430 TILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVL 489
ILDT +GGVRF++ ++ + Y +++EY Q+ +V +V+ +A Y + +NQL++
Sbjct: 361 EILDTQKGGVRFRNKQMTSLTETYAEVKQEYNGLQEVVVHQVVCAAATYLEPINQLNETT 420
Query: 490 AQFDVLVSFSIASTCAPK-PYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFK 548
A DV+VS +IA+ + Y+RP + G ++L + RHP +E+Q VS IPND++ +
Sbjct: 421 AFLDVIVSLAIAAISSSGVSYIRPKILSEDNGRIILKEARHPCLEMQDRVSVIPNDIHLE 480
Query: 549 SGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQ 608
G+ F ++TGPNMGGKSTYI S+ V V +AQIG FVPC A I VD I RVGAAD Q
Sbjct: 481 RGKQIFLIITGPNMGGKSTYIHSVAVIVAMAQIGSFVPCSYAEIMPVDAIMARVGAADYQ 540
Query: 609 YRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQP-F 667
RG+STF+ EM ET++V++ T NSLVIIDELGRGTST+DGFG+A ++A LAS F
Sbjct: 541 CRGVSTFLAEMLETSSVLRSVTRNSLVIIDELGRGTSTYDGFGLAWAVASFLASPEVGCF 600
Query: 668 TLFATHFHEIALLSRVIP-------TFRNVQ-----VSALEQEDNLVLLYQVKPGSCVKS 715
LFATHFHE+ L+ +P NV V E E + +LY+V+ G C +S
Sbjct: 601 GLFATHFHELTSLAYYMPKRVANLRVLCNVSNDKEIVENKESETKVTMLYKVEAGVCSRS 660
Query: 716 YGVHCAKMAGYPEDMLEQA 734
YG+ A++AG P ++++QA
Sbjct: 661 YGLDVARLAGLPIEVIKQA 679
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 100/255 (39%), Gaps = 67/255 (26%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
FY F+ K TT+R F R E +H DA L+ + LVK + +L V
Sbjct: 11 FYSFWKSLGPKPPTTLRCFERGEMMTLHDSDAILVATDYYKNLSLVKRFSRGKSSLSYVT 70
Query: 60 VNKSNLSCFSHIL----------CVIS-----------------EDKTLETVLTNT---- 88
V K N H L C + + ++E +LT+T
Sbjct: 71 VKKQNTDFLRHFLLKRQYRIEIYCSTTKCGRDNEWSLKLKASPGDLSSIEDLLTSTSESV 130
Query: 89 ------------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
V +A D +++KF +GE D + +NLE +VQ +ECL+P
Sbjct: 131 EACGLSAVNIKQLNEQIHVCLAFCDTESQKFLVGEFMDSVHLANLETALVQLKTRECLVP 190
Query: 131 AEYLN--DNKNKIVTILD------------RNKVCMTGRKKNEFSEEDLMQDVNRLVRFD 176
L+ D VT+LD R V T KK+EFS QD++ +RF
Sbjct: 191 TGLLSHPDISKSDVTLLDNAISEHVSLVFERTGVLPTEVKKSEFSHIIKPQDLSYFLRF- 249
Query: 177 DSELKNARLLPEMCL 191
+ E N LL E +
Sbjct: 250 EKENPNGSLLYEKAM 264
>gi|71421366|ref|XP_811786.1| DNA mismatch repair protein MSH2 [Trypanosoma cruzi strain CL
Brener]
gi|70876490|gb|EAN89935.1| DNA mismatch repair protein MSH2, putative [Trypanosoma cruzi]
Length = 989
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 192/634 (30%), Positives = 337/634 (53%), Gaps = 61/634 (9%)
Query: 152 MTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNE 211
+ GR++ ++ D + + ++R + RL C A+ + L++ +++N
Sbjct: 294 LQGRREGNVTKGDFLSALEDILRVPED-----RLALSNC-PLASRAIEYLVS--NIIDNF 345
Query: 212 DNMNQFSI---HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
D N + H+I S ++ + +A + +LH++ Q+ S+ L+RC T G
Sbjct: 346 DATNHRAFYLKHTIP-STFMKLDTAAIQALHIIHQKPEARGSLPTSVYSWLNRCVTGMGS 404
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
R++ QW+ QPL++ + I +R + V ++V ++ R L LR DM L ++ R+
Sbjct: 405 RMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLSQVLRCCGDMDRLNRKLQRRSI 464
Query: 329 GLKDCYRVYEGVSQLPKLISILES--------LVQNVEASNLNTILSSLQSLKMM----- 375
LKD + V+ +P+ + +L + L+ + + L I +L+++
Sbjct: 465 ALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLEDINEHFSNLRILITATV 524
Query: 376 ------------DRKDAVMD------KMKEYLESTARRLNLV---ADKTIKLE-NSPQGF 413
+ D +M+ + + +ES +R+ V +K +K E ++ G+
Sbjct: 525 DLSDENTTRINPEFDDELMELEEQRKSVVKAIESEHQRVMKVYGWTEKQLKCEYHTTYGY 584
Query: 414 AYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEV 471
+R+T K + + + T + GVRF +RL++ + QY+ I++ Y+ QQ + +++
Sbjct: 585 VFRVTRKEDQQVRTSKELITVSTSKDGVRFVSERLSSLSEQYKGIRKVYDVRQQDLKQKL 644
Query: 472 IGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP-------MGTGSLV- 523
+ Y L+ +++A DV V+++ +P P VRP ++ G SL+
Sbjct: 645 VSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVRPTIRTPETEEEQEGNKSLIT 704
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L RHP+VEL+ V Y PN + + + + ++TGPNMGGKST++RS+G+ V LAQ GC
Sbjct: 705 LLNVRHPLVELRQPV-YTPNTLRL-TDDANALIITGPNMGGKSTFMRSVGICVVLAQAGC 762
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP DSA + D + RVGA D +G+STFM+EM E+A ++ T +SL IIDELGRG
Sbjct: 763 FVPADSADVVTRDAVMCRVGATDHLAQGVSTFMVEMLESAAILNAATRDSLAIIDELGRG 822
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ--EDNL 701
TST+DGFG+A +IA+E+A + LF+THFHE+ L+ RN A E L
Sbjct: 823 TSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLAEHHTNVRNAHFGAEVNTVEGTL 882
Query: 702 VLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
Y+++PG C +SYG++ A++A PE++++ A+
Sbjct: 883 RFSYRLEPGPCGRSYGLYVAQLANLPEEVVQSAK 916
>gi|146097510|ref|XP_001468124.1| MSH2 [Leishmania infantum JPCM5]
gi|134072491|emb|CAM71203.1| MSH2 [Leishmania infantum JPCM5]
Length = 939
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 211/729 (28%), Positives = 361/729 (49%), Gaps = 80/729 (10%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL-----------PAEYLN 135
+G A ++ ++ E D ++L+A++ Q + KE LL A + +
Sbjct: 150 TAIGFAALNNTLRQLTFAEYTDTPQLTSLDALVAQTNLKELLLCVMSPAASAGAEATFSD 209
Query: 136 DNK-NKIVTILDRNKVCMTGRKKNEF----SEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
D++ + I +R V ++ R E EE + + L + RL E+C
Sbjct: 210 DDRITAVRRICERCGVQLSVRSLREIQQLQKEEAAAKGLEALAEI--LRVPEERLSLELC 267
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQ 250
A + +++ +++M+ N F + S Y+ + SA + +L+++ ++
Sbjct: 268 -PIARQAVENILGRIDVMD-PSNRRAFYLRRTVPSTYMKLDSAAIEALNLVSKKPEPRGT 325
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
S+ L+RC T G R + QW+ QPL+ + I +R V + V N R L
Sbjct: 326 LPTSVFSWLNRCHTGMGARAMRQWLLQPLRCAEDINQRLTMVELFVENPILRDMFTTQVL 385
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ--------------- 355
+ DM L ++ R+ LKD E V+ +P + +L +
Sbjct: 386 KRCGDMDRLNRKLQRRSLALKDTQAFLEFVNVVPAALQVLGTYTGPQSKLLKDEYIAPME 445
Query: 356 --NVEASNLNTIL------SSLQSLKMMDRKDAVMDKMKEYLESTARRLNL--------- 398
N +NL T++ S +++M D + + E L ST R+++
Sbjct: 446 DINDHMANLKTLIEATVDFSDRNAVRMNAAFDDELQALHEQLTSTQRQIDKEYGRVLSKY 505
Query: 399 -VADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTIL--DTVRGGVRFQDDRLATANTQYQ 454
+K +K E + G+ +R++ K + + ++ T + GVRF +++A + QY+
Sbjct: 506 GWNEKQLKHEYHGTYGYVFRVSRKEDRQLRSTKELITVSTSKDGVRFVSEKMAALSEQYR 565
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
I +YET Q + +++ A Y L+ +++A DV V++++ P+P VRP +
Sbjct: 566 RISDDYETRQMDLKRKLVDTIASYLPVLDDAKELIATLDVFVAWALVVKDCPRPMVRPAV 625
Query: 515 KPM-GTGSLV-----------------LNQCRHPIVEL-QGGVSYIPNDVYFKSGEVSFN 555
+ GT +LV + RHP+VEL Q G Y N ++ + + +
Sbjct: 626 REAPGTVALVKQEGTSARGADAAPLLSFKRLRHPLVELRQPG--YKANPLHLTT-QTNGL 682
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
L+TGPNMGGKSTY+RS+GV+V LAQ GCFVP D+A + V D + RVGA D +G+STF
Sbjct: 683 LITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQVRDAVMCRVGATDHLAQGVSTF 742
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M+EM E+A+++ T+++L IIDELGRGTST+DGFG+A +IA+++A + LF+THFH
Sbjct: 743 MVEMLESASILTGATQDTLAIIDELGRGTSTYDGFGLAWAIAQDVAVRVRATLLFSTHFH 802
Query: 676 EIALLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQ 733
E+ L + +N+ A E L Y ++PG C +SYG++ A +A PE ++
Sbjct: 803 ELTQLPQQCSALQNMHFGAEVDESAGTLRFSYTLQPGPCGRSYGLYVASLAHLPESVIAC 862
Query: 734 ARDLMKEYE 742
A+ + E+E
Sbjct: 863 AKVKVAEWE 871
>gi|341876712|gb|EGT32647.1| hypothetical protein CAEBREN_29612 [Caenorhabditis brenneri]
Length = 867
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 293/531 (55%), Gaps = 49/531 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L ++++C+T G +LL W+ +PL ++D I ER V L+ N R L + L +
Sbjct: 316 TLYNVINKCKTLPGEKLLRDWLSRPLCNIDHINERLDIVEALIENQTVRQKLRDSFLARM 375
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP----KLISILE-----SLVQNVEASNLNT 364
PD LA R+ RK + L+D R Y+ + L +LI + E + ++ + S +
Sbjct: 376 PDCSQLARRLIRK-STLQDLNRFYQAATLLESVEMQLIQLCENEKFSASIERLLKSEVTA 434
Query: 365 ILSSLQSLKMMDRKDAVMDKMKEYLESTAR---------------RLNLVADK------- 402
IL ++ +++ + D KE E + ++ +A+K
Sbjct: 435 ILKKVERFQILCDEFFDFDYEKENKEIRVKVDFVPEIQEISEKLDKVEKIAEKLRKKYAT 494
Query: 403 -----TIKLENSPQ-GFAYRITMKLNNSIDDR-YTILDTVRG-GVRFQDDRLATANTQYQ 454
++KL+ + Q G+ +R+T+K SI + IL+T +G GV+F L+ N ++
Sbjct: 495 KFECDSMKLDKNAQYGYYFRVTLKEEKSIRKKDVHILETTKGSGVKFTVGELSDINDEFL 554
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
+Y ++ ++ + + + + +S ++A DV VS S + + Y RP +
Sbjct: 555 DFHLKYIRAEEEVISMLCKKAEEFIPLIPAMSQLIATLDVFVSLSTFAASSSGIYCRPNL 614
Query: 515 KPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
P+G+ L L QCRHP++E +IPNDV E ++TG NMGGKSTY+RS +
Sbjct: 615 LPLGSKQLNLKQCRHPVIEGNSDKPFIPNDVVLD--ENRLIVLTGANMGGKSTYLRSAAL 672
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
S+ L+QIG FVPC SATISVVD IFTRVGA+D Q +GISTFM EM + + ++++ TENS
Sbjct: 673 SILLSQIGSFVPCTSATISVVDGIFTRVGASDKQSQGISTFMAEMLDCSAILQRATENSF 732
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR---VIPTFRNVQ 691
V+IDELGRGTSTFDGFG+A +IA+++ + + ++FATHFHE+ L+ + VQ
Sbjct: 733 VVIDELGRGTSTFDGFGIASAIAQDILNRIKCLSIFATHFHEMGKLAEQEGAVALQMGVQ 792
Query: 692 VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V + + + +LY+V G S+G+ AKM G E ++ +A L++ E
Sbjct: 793 V----ENNEINMLYKVFDGVAQCSFGLQVAKMVGIDESVINKASKLLEGLE 839
>gi|324506957|gb|ADY42957.1| DNA mismatch repair protein MSH2 [Ascaris suum]
Length = 414
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/383 (40%), Positives = 242/383 (63%), Gaps = 13/383 (3%)
Query: 399 VADKTIKLENSPQ-GFAYRITMKLNNSIDDR-YTILDTVRG-GVRFQDDRLATANTQYQA 455
++ K+ KL+++PQ GF +R+T+K SI IL+T +G GVRF L N +Y+
Sbjct: 28 ISQKSAKLDSNPQYGFFFRVTLKAEKSIRQAGLKILETTKGSGVRFTSKALEALNNEYKE 87
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
+Q++Y++ Q +++ VI AGY L QLS+ LA DVLV+F+ +T +P PY RP +
Sbjct: 88 LQKQYDSSQSELIKMVIETCAGYAPALQQLSECLAVIDVLVAFATLATLSPFPYSRPQLI 147
Query: 516 PMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSG---EVSFNLVTGPNMGGKSTYIRS 571
+ LVL CRHP++E L +IPNDV F L+TG NMGGKSTY+RS
Sbjct: 148 DKESRVLVLKSCRHPVLEALPEAPPFIPNDVLMGENPEDSTRFLLLTGANMGGKSTYLRS 207
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
+ V + Q+GCFVPC+ A S++D I TR+G+ D Q +G+STFM EM ++A++++ T
Sbjct: 208 CALCVLMGQMGCFVPCEYAKFSLIDGIHTRIGSCDYQCKGVSTFMAEMIDSASILEAATS 267
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP-TFRNV 690
SLV++DELGRGTST+DGFG+A +IA ++ + + +FATHFHE++ L P RN+
Sbjct: 268 KSLVVVDELGRGTSTYDGFGLAWAIADDILARIKCLCIFATHFHEMSALHERYPNALRNI 327
Query: 691 QV-SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT 749
+V + +++ L+LLY+V PG +S+G++ AK+ G +D++E+A ++++ L+ T
Sbjct: 328 RVETQIDENGELILLYKVMPGIAERSFGINIAKLVGISDDIIEEAEVMLQK----LEKNT 383
Query: 750 PSGDETNNREEEYFKTVQEGEYQ 772
D+ R KT+Q E +
Sbjct: 384 IDNDDEEERIIGKLKTLQGEELR 406
>gi|9864530|gb|AAG00261.1| MSH2 [Trypanosoma cruzi]
Length = 962
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/635 (29%), Positives = 335/635 (52%), Gaps = 62/635 (9%)
Query: 152 MTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNE 211
+ GR++ ++ D + + ++R + RL C A+ + L++ +++N
Sbjct: 266 LQGRREGNVTKGDFLSALEDILRVPED-----RLALSNC-PLASRAIEYLVS--NIIDNF 317
Query: 212 DNMNQFSI---HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
D N + H+I S ++ + +A + +LH++ Q+ S+ L+RC T G
Sbjct: 318 DATNHRAFYLKHTIP-STFMKLDTAAIQALHIIHQKPEARGSLPTSVYSWLNRCVTGMGS 376
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
R++ QW+ QPL++ + I +R + V ++V ++ R L LR DM L ++ R+
Sbjct: 377 RMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLSQVLRCCGDMDRLNRKLQRRSI 436
Query: 329 GLKDCYRVYEGVSQLPKLISILES--------LVQNVEASNLNTILSSLQSLKMM----- 375
LKD + V+ +P+ + +L + L+ + + L I +L+++
Sbjct: 437 ALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLEDINEHFSNLRILITATV 496
Query: 376 DRKDAVMDKMK-----EYLESTARRLNLV----------------ADKTIKLE-NSPQGF 413
D D ++ E +E +R ++V +K +K E ++ G+
Sbjct: 497 DLSDENTTRINPEFDDELMELEEQRKSVVKAIESEHQRVMKVYGWTEKQLKCEYHTTYGY 556
Query: 414 AYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEV 471
+R+T K + + + T + GVRF +RL++ + QY+ I++ Y+ QQ + +++
Sbjct: 557 VFRVTRKEDQQVRTSKELITVSTSKDGVRFVSERLSSLSEQYKGIRKVYDVRQQDLKQKL 616
Query: 472 IGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP-------MGTGSLV- 523
+ Y L+ +++A DV V+++ +P P VRP ++ G SL+
Sbjct: 617 VSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVRPTIRTPETEEEQEGNKSLIT 676
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L RHP+VEL+ V Y PN + + + + ++TGPNMGGKST++RS+G+ V LAQ GC
Sbjct: 677 LLNVRHPLVELRQPV-YTPNTLRL-TDDANALIITGPNMGGKSTFMRSVGICVVLAQAGC 734
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP DSA + D + RVGA D +G+STFM+EM E+A ++ T +SL IIDELGRG
Sbjct: 735 FVPADSADVVTRDAVMCRVGATDHLAQGVSTFMVEMLESAAILNAATRDSLAIIDELGRG 794
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR---VIPTFRNVQVSALEQEDN 700
TST+DGFG+A +IA+E+A + LF+THFHE+ L+ R + + +
Sbjct: 795 TSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLAEHHTKCAGMRTLAPKSTQSRGT 854
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
L Y+++PG C +SYG++ A++A PE++++ A+
Sbjct: 855 LRFSYRLEPGPCGRSYGLYVAQLANLPEEVVQSAK 889
>gi|401427606|ref|XP_003878286.1| MSH2 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322494534|emb|CBZ29836.1| MSH2 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 939
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 216/765 (28%), Positives = 371/765 (48%), Gaps = 85/765 (11%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL----------PAEYLND 136
+G A ++ ++ E D ++L+A++ Q + KE LL ND
Sbjct: 150 TAIGFAALNNTLRQLSFAEYTDTLQLTSLDALVAQTNLKELLLCVMSSAASAGAEATFND 209
Query: 137 NK--NKIVTILDRNKVCMTGRKKNEFSE----EDLMQDVNRLVRFDDSELKNARLLPEMC 190
+ + I +R V ++ R E + E + + L + RL E+C
Sbjct: 210 DDRITAVRRICERCGVQLSVRTLREVQQLQKAEAAAKGLEALAEI--LRVPEERLSLELC 267
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQ 250
A + +++ +++M+ N F + S Y+ + SA + +L ++ ++
Sbjct: 268 -PIARQAVENILGRIDVMD-PSNQRAFYLRRTVPSTYMKLDSAAIEALDLVSKKPEPRGT 325
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
S+ L+RC T G R + QW+ QPL+ D I +R V + V N R L
Sbjct: 326 LPTSVFSWLNRCHTGMGARAMRQWLLQPLRCADDINQRLTMVELFVENPILRDMFTAQVL 385
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ--------------- 355
+ DM L ++ R+ LKD E V+ +P + +L +
Sbjct: 386 KRCGDMDRLNRKLQRRSLALKDTQAFLEFVNVVPAALQVLGTYTGPQSKLLKDEYVAPLE 445
Query: 356 --NVEASNLNTIL------SSLQSLKMMDRKDAVMDKMKEYLESTARRLNL--------- 398
N +NL T++ S +++M D + + E L ST R+++
Sbjct: 446 DINDHMANLKTLIEATVDFSDRNAVRMNATFDDELQDLHEQLTSTQRQIDKEYGRVLSKY 505
Query: 399 -VADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTIL--DTVRGGVRFQDDRLATANTQYQ 454
+K +K E + G+ +R++ K + + ++ T + GVRF +++A + QY+
Sbjct: 506 GWNEKQLKHEYHGTYGYVFRVSRKEDRQLRSTKELITVSTSKDGVRFVSEKMAALSEQYR 565
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
I +YET Q + +++ A Y L+ +++A DV V++++ P+P VRP +
Sbjct: 566 RISDDYETRQMDLKRKLVDTIASYLPVLDDAKELIATLDVYVAWALVVKDCPRPMVRPVV 625
Query: 515 ----------KPMGTGS--------LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNL 556
K GTG+ L RHP+VEL+ +Y N ++ + + + L
Sbjct: 626 REAPGTVTLVKQEGTGARSADAAPLLSFKGLRHPLVELRQP-AYKANPLHLTT-QTNGLL 683
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNMGGKSTY+RS+GV+V LAQ GCFVP D+A + V D + RVGA D +G+STFM
Sbjct: 684 ITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQVRDAVMCRVGATDHLAQGVSTFM 743
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM E+A+++ T+++L I+DELGRGTST+DGFG+A +IA+++A + LF+TH+HE
Sbjct: 744 VEMLESASILTGATQDTLAIVDELGRGTSTYDGFGLAWAIAQDVAVRVRATLLFSTHYHE 803
Query: 677 IALLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
+ L + +N+ A E L Y ++PG C +SYG++ A +A PE ++ A
Sbjct: 804 LTQLPQQCSALQNMHFGAEVDESAGTLRFSYTLQPGPCGRSYGLYVASLAHLPESVIACA 863
Query: 735 RDLMKEYEY---SLDTKTPSG----DETNNREEEYFKTVQEGEYQ 772
+ + E+E TK+ +G ++ + Y K ++E E Q
Sbjct: 864 KVKVAEWETFEKEGATKSSAGAALEEKVVRKVSAYAKRIRELEQQ 908
>gi|156083094|ref|XP_001609031.1| DNA mismatch repair enzyme [Babesia bovis T2Bo]
gi|154796281|gb|EDO05463.1| DNA mismatch repair enzyme, putative [Babesia bovis]
Length = 791
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 208/728 (28%), Positives = 349/728 (47%), Gaps = 82/728 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
+GVAI ++ + EI D+++++ LE+I++Q +P C++ + + +I IL
Sbjct: 36 LGVAICNVLDSNLNIVEINDNEFFTVLESILLQVAPTVCIMSTTKDSIDIKRIKHILSLC 95
Query: 149 KV-CMTGRKKNEFSEEDLMQDVN-----RLVRFDDSELKNARLLPEMCLTTATHCLRSLI 202
+ C+ + ++++ + + L+N L L +
Sbjct: 96 NIDCLKHITTSITDSITTVEEMRIKGNLEFLLGQEDHLRNYSKFFASPL--GMRALLDIF 153
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST-SAQTYDSLLGILDR 261
+ EL+ F + + Y+ M A +SL +LP + + T SL G+L++
Sbjct: 154 DTFELLKQPTCKQSFRLGYYKLNNYLSMDRAAFASLSILPSTSNYFNESTGTSLFGLLNK 213
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
CRT G R L W+ QPL D D I +RH V + A + LR +PD+ S+ M
Sbjct: 214 CRTAIGARRLRMWVSQPLTDADEISKRHDCVEAFMGG--AYKTMQAECLRKVPDLDSIIM 271
Query: 322 RIG------------RKKAGLKDCYRVYEGVSQLPKLISIL------------------- 350
+ + +D +YE V + +++ L
Sbjct: 272 KFKSLEGVSELSSTQKNVMTFEDVVHLYECVIAVNRMVQFLLIPYNGIHADTVKLMFSGP 331
Query: 351 ---------------ESLVQNVEASNLNTILSSL--QSLKMMDRK-DAVMDKMKEYLEST 392
E V EA N +++ ++L +M K D + D+M+ ES
Sbjct: 332 LFKISSLFEPFLRLVEKTVDLKEAEKRNYVINRNFDKNLSLMGNKLDTIRDEMEHLRESI 391
Query: 393 ARRLNLVADKTIK------LENSPQGFAYRITMKLNNSIDDRYTILDTV------RGGVR 440
+ KT K +E + GF +R++ K + + + I V +
Sbjct: 392 EDEIYYGLKKTKKGGNLKLIECNHMGFLFRVSKKDHALLQECEGISKYVEKVRLNKTEFL 451
Query: 441 FQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSI 500
F +L ++ Q+EYE Q ++++ + ++A Y + + ++++A D+LV+F
Sbjct: 452 FTTSKLRHLCAKFANAQKEYEIAQSRLMKKALKVAATYWPLVERFTNIIATLDILVAF-- 509
Query: 501 ASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVS---YIPNDVYFKSGEVSFNLV 557
A A YVRP + + + L RHP+VE G++ ++PN +Y ++
Sbjct: 510 AEAAATLQYVRPEID-LENKEISLVNARHPLVEC--GINTRLFVPNSLYMTRETSLVHIT 566
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNMGGKSTYIR +G+ V + QIG FVPC SA I + + RVGA+D Q RG+STF+
Sbjct: 567 TGPNMGGKSTYIRQVGIIVVMNQIGSFVPCTSAKIPIFKHVLCRVGASDIQLRGVSTFLA 626
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E A ++K E+SLVIIDELGRGTST+DGF +A +I +L ++ + F L ATHFHE+
Sbjct: 627 EMIEAAAILKTANEHSLVIIDELGRGTSTYDGFALAWAIIVDLLNNAKCFCLCATHFHEM 686
Query: 678 ALLSRVIPTFRNVQVSA--LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
L P N V+A E+ +VLLY++K G C +SY ++ A +A +P++++ A+
Sbjct: 687 GELKDDYPCVENKYVAAKYFEETKKMVLLYEIKDGVCKESYAINVADIALFPQEVIANAQ 746
Query: 736 DLMKEYEY 743
+ E E+
Sbjct: 747 VKLAELEH 754
>gi|440300090|gb|ELP92583.1| DNA mismatch repair protein MsH2, putative [Entamoeba invadens IP1]
Length = 629
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 293/561 (52%), Gaps = 45/561 (8%)
Query: 223 DYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDL 282
D S + +S ++S LH+ TS SL +L++ +T G +LL ++ PL +
Sbjct: 7 DESDTMTLSPEIISGLHI------TSETKELSLFSLLNKTKTANGKKLLENYILHPLTNK 60
Query: 283 DAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQ 342
I R V V+N+ AR+ + E L +PD+ + I +K L++ +Y +
Sbjct: 61 TQINFRLDLVQSFVDNSPARLRIMEEGLVLIPDITRITKTI--EKITLENVVILYNVIQS 118
Query: 343 LPKLISILESLVQN--------------VEASNLNTILSSLQSL--------KMMDRKDA 380
K+ L+ + + N ++++L L ++ D D
Sbjct: 119 TKKICEFLDDIKGTQIGLQITFPLKKCLADLVNYEELVNTLIDLDAAHNGVYRIRDDFDE 178
Query: 381 VMDKMKEYLES-----------TARRLNLVADKTIKLENSPQGFAYRITMKLNNSI--DD 427
+ ++E L+ TA L + ADK +KL R+ + ++ D
Sbjct: 179 TLRDIREKLDEIDKLFTAAQLQTASDLGVKADK-VKLVEYNSNTVLRVAKGIEKTVKADS 237
Query: 428 RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSD 487
R+ +L +++G +F L N + + ++ + Q+ V+E++ + GY + ++S
Sbjct: 238 RFKVLQSLKGECKFTFKTLQELNVKKAELVKKQDKVSQTFVDEIVKVVVGYKSSFEEISS 297
Query: 488 VLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYF 547
V++ DV+ SF+ + + + YVRP + G+++L + RHP+ E ++ NDVY
Sbjct: 298 VVSLIDVIQSFATTAVNSEESYVRPVITE-DAGNIILMKARHPLAETLSSSGFVENDVYI 356
Query: 548 KSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADS 607
F +VTGPNMGGKSTY+R IG+ V +AQIG +VPCDSA +++ D + R+GA D
Sbjct: 357 NRETSRFQIVTGPNMGGKSTYLRMIGMCVIMAQIGMYVPCDSAEVAICDNVMCRIGAGDD 416
Query: 608 QYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPF 667
+G+STFM EMK++A +++K T +LV+IDELGRGTSTFDGFG+A I+ L + F
Sbjct: 417 IVQGVSTFMAEMKDSAQILRKATSKTLVLIDELGRGTSTFDGFGIAWGISEYLINEIGCF 476
Query: 668 TLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYP 727
+FATHFHE+ L + +NV V A LVL Y+V GS +S V+ A+ A +P
Sbjct: 477 CVFATHFHEVTALEKRNAGVKNVHVVASIVNRQLVLKYKVNDGSTDQSLAVYVAEWADFP 536
Query: 728 EDMLEQARDLMKEYEYSLDTK 748
++++++A+ + E D+K
Sbjct: 537 KEVVDEAKKKAHDLELETDSK 557
>gi|340397917|ref|YP_004726942.1| DNA mismatch repair protein mutS [Streptococcus salivarius CCHSS3]
gi|338741910|emb|CCB92415.1| DNA mismatch repair protein mutS [Streptococcus salivarius CCHSS3]
Length = 852
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 294/555 (52%), Gaps = 41/555 (7%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+ +PL + AI+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLVNQAAIM 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEA-SNLNTILSSLQSLKMMDRK--------------------DAVMDKM 385
SILES N EA S L L +L L+ + R D +DK
Sbjct: 366 KSILESF--NDEALSRLLQELDALPELESLIRSAIDPDAPATITEGGIIRAGFDETLDKY 423
Query: 386 KEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVR 436
++ + E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 424 RKVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLK 483
Query: 437 GGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLV 496
RF LA + + + T + I V Y L L+ +A DVL
Sbjct: 484 NSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQ 543
Query: 497 SFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFN 555
S ++ T YVRP +V++Q RH +VE GV YIPN + F S + +
Sbjct: 544 SLAV--TAETNHYVRPVFN--DEHRIVIDQGRHAVVEKVMGVQEYIPNTITFDS-QTNVQ 598
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
L+TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STF
Sbjct: 599 LITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQSTF 658
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+H
Sbjct: 659 MVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYH 718
Query: 676 EIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
E+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+LE+A
Sbjct: 719 ELTALSNTLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPADLLERAD 778
Query: 736 DLMKEYEYSLDTKTP 750
++ + E T P
Sbjct: 779 TILTQLEGETVTIQP 793
>gi|269926487|ref|YP_003323110.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790147|gb|ACZ42288.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 862
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 208/686 (30%), Positives = 335/686 (48%), Gaps = 43/686 (6%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
VG+A D+ T FY EI +D L I + P E L+ ++ +K+ T +
Sbjct: 133 VGLAFADVSTGDFYATEITGEDRLDKLRDEITRIQPSEVLV-----SEGPDKVHTSEEHV 187
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS---LINYL 205
+ +G E + + R L +A+ L L + L+S L+ Y+
Sbjct: 188 WMKQSGHPAQITVLESWKWKTD-VARDSVLSLTDAQSLEAFGLDSMPVALKSAGALVQYI 246
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
N + S ++ + +L ++ ST SLL +LD T
Sbjct: 247 SDTNPAALSTLRPPSTYFLSNFMPLDDRTRRNLELIE---STRGDKSLSLLAVLDHTSTA 303
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G R+L W+ QPL ++I R V V ++EAR + E AL+ + D++ LA R+ +
Sbjct: 304 MGARMLRNWINQPLISKESIENRLNRVQEFVAHSEARERIRE-ALKQVSDLERLANRLVQ 362
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN------TILSSLQS-------- 371
K ++ + + ++P+L+ IL+ ++ S N ILS+L
Sbjct: 363 KTITPRELRSLALSLEKIPELVQILQQCNMQLQVSIHNFQHIVDLILSALVDDPPAVRGS 422
Query: 372 --------LKMMDRKDAVMDKMKEYLESTARR-LNLVADKTIKLE-NSPQGFAYRITMKL 421
+ +DR + K+++ S R+ K +++ N G+ +T
Sbjct: 423 GTIIREGYSQELDRLRSASTNAKQWIASLERKEREATGIKNLRIGYNKVFGYYIEVTNSF 482
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ + DRY T+ G RF L + Q E ET ++ +++E+I AG
Sbjct: 483 KHLVPDRYIRKQTLVGAERFITPELKEYESLILNSQTEAETIEEQLLDELITRIAGEAGK 542
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + +A+ D VS +A YVRP + + + RHP+VEL+ ++
Sbjct: 543 IFSTARQIAEIDCYVS--LAEAAVRHQYVRPIVSE--DDVIEIKGGRHPVVELRASEGFV 598
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PND + ++TGPNM GKSTY+R + + +AQIG FVP DSA I +VD+IFTR
Sbjct: 599 PNDAFLDQETHQVLILTGPNMAGKSTYLRQVALITLMAQIGSFVPADSARIGIVDRIFTR 658
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
VGA D G STFM+EM ETA ++ CT SLVI+DE+GRGTST+DG +A ++ L
Sbjct: 659 VGAQDDIASGQSTFMVEMTETAYILAHCTPKSLVILDEIGRGTSTYDGMAIAQAVVEYLH 718
Query: 662 --SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVH 719
+ + TLFATH+HE+ L +P +N ++ LE+ +++V L +V PG KSYG+H
Sbjct: 719 NNTRTRARTLFATHYHELTSLEEFLPRVKNFRMEVLEEGNDVVFLRKVVPGGADKSYGIH 778
Query: 720 CAKMAGYPEDMLEQARDLMKEYEYSL 745
AK+AG P+ ++ +A++L+KE E L
Sbjct: 779 VAKLAGIPKSVIRRAQELLKELEAQL 804
>gi|322374236|ref|ZP_08048768.1| DNA mismatch repair protein MutS [Streptococcus sp. C150]
gi|321276840|gb|EFX53913.1| DNA mismatch repair protein MutS [Streptococcus sp. C150]
Length = 852
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 194/592 (32%), Positives = 311/592 (52%), Gaps = 40/592 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+ +PL + AI+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLVNQAAIL 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTILSSLQSLKMMDRK--------------------DAVMDKMK 386
+ILES +V ++ L L +L L+ + R D +DK +
Sbjct: 366 KAILESFNDDVLSALLQD-LDTLPELESLIRSAIDPDAPATITEGGIIRAGFDETLDKYR 424
Query: 387 EYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRG 437
+ + E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 425 KVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKN 484
Query: 438 GVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 485 SERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQS 544
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNL 556
++ T YVRP +V++Q RH +VE GV YIPN + F S + + L
Sbjct: 545 LAV--TAETNHYVRPVFN--DEHRIVIDQGRHAVVEKVMGVQEYIPNTITFDS-QTNIQL 599
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQSTFM 659
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE
Sbjct: 660 VEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHE 719
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+LE+A
Sbjct: 720 LTALSNTLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLERADT 779
Query: 737 LMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKD 788
++ + E T P ++ + +E+ +T + +FD + L + +D
Sbjct: 780 ILTQLEGETVTIQPQ-EKVSPQEKPVTETHVNEQISLFDDFTENPVLQELRD 830
>gi|221051944|ref|XP_002257548.1| DNA mismatch-repair protein [Plasmodium knowlesi strain H]
gi|193807378|emb|CAQ37883.1| DNA mismatch-repair protein, putative [Plasmodium knowlesi strain
H]
Length = 855
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 217/741 (29%), Positives = 376/741 (50%), Gaps = 93/741 (12%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL---PAEYLNDNKNKIVTIL 145
G+ I +++T +F + E ++++++ LE++++Q P C L + L+D + K++ L
Sbjct: 58 AGICIYNMNTNEFSLCEYIENEHFTILESLLIQCRPT-CFLYLSNNDKLDDKRIKLILSL 116
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
K GR + ++ + D+++L++ ++KN + L A S++ ++
Sbjct: 117 CEVKYRELGRA-DFYNTCSMENDLSKLLK-PTEDVKNC--ISFFKLKLACRSFTSIVKHM 172
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSL-----HVLPQQGSTSAQ-TYDSLLGIL 259
L+N+ N+ + + + ++Y+ + A +L H+L ++ ++ + T ++L L
Sbjct: 173 NLLNDYSATNKCLLTNYNINRYLKLDRAATIALNVHEEHMLGEKKTSCKRGTNNTLYTFL 232
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM--- 316
++C+T G R L QW+ P++D I ER V+IL + R + LR + D+
Sbjct: 233 NKCKTKIGERKLLQWVMHPIRDEAKINERLDMVSILKEDGVMRSMIQSDYLRKISDLDVI 292
Query: 317 ----------------QSLAMRIGRKK-------AGLKDCYRVYEGV------------- 340
+++A RIG K ++D ++Y+ V
Sbjct: 293 IKKLKIVNSTTGEGKEENVARRIGGGKVKGGKNMCTIEDLVKMYDSVVVSKRIYYCLNDY 352
Query: 341 -------------SQLPKLISILESLVQNVEA-------SNLNTILSSL---QSLKMMDR 377
+ L +++ L+S V+ +E SN N ++S Q K+
Sbjct: 353 AGKYRNTLEKNFLTPLKEVLISLDSFVKLIELTVDFDELSNNNFLISRKFDEQLEKLASE 412
Query: 378 KDAVMDKMKEYLESTARRLNLV--------ADKTIKL-ENSPQGFAYRITMKLNNSIDDR 428
KD + +KE+ + +N + A + IKL + + F +R K +SI R
Sbjct: 413 KDETLRMIKEHRQEVEDDINNLKGISKKNNAKEDIKLVDCNINTFLFRAVKKDISSIQQR 472
Query: 429 YTILDTVR---GGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQL 485
VR + F ++L +Y+ I ++Y Q+ + + I +++ Y +L
Sbjct: 473 KKTYFQVRMNKSEILFTTNKLKELCKRYEYILQDYNMAQEQLASKAIQVASSYWDPTTKL 532
Query: 486 SDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV--SYIPN 543
S ++AQ DVL +F+ S + YVRP + G L L + RHP+VE + ++IPN
Sbjct: 533 SKLIAQIDVLSAFAFVSASSISVYVRPIAETNGQ-VLQLIESRHPLVESNFLLMNNFIPN 591
Query: 544 DVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVG 603
DV+ + N++TGPNMGGKSTYIR I + +AQIGCFVPC A I + QI RVG
Sbjct: 592 DVHMNKTDKRLNIITGPNMGGKSTYIRQIALICLMAQIGCFVPCTYARIPIFSQIMCRVG 651
Query: 604 AADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASH 663
++D Q +GISTF EM E + +IK EN+LVIIDELGRGTST++GFG++ ++A+ +
Sbjct: 652 SSDIQLKGISTFFSEMIEISAIIKNADENTLVIIDELGRGTSTYEGFGISWAVAQYILKK 711
Query: 664 RQPFTLFATHFHEIALLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSYGVHCA 721
+ F LFATHFHE++ L N V A ++ + LY++K G KSYGVH A
Sbjct: 712 IKCFCLFATHFHEMSNLEDEYQGATNNHVGAKIDPEKKKISFLYEIKKGYADKSYGVHVA 771
Query: 722 KMAGYPEDMLEQARDLMKEYE 742
++A P++++++A + KE E
Sbjct: 772 QIAKLPQNVIDKAFEKSKELE 792
>gi|228476706|ref|ZP_04061375.1| DNA mismatch repair protein MutS [Streptococcus salivarius SK126]
gi|228251655|gb|EEK10752.1| DNA mismatch repair protein MutS [Streptococcus salivarius SK126]
Length = 852
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 292/554 (52%), Gaps = 39/554 (7%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+ +PL + AIV
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLVNQAAIV 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTILSSLQSLKMMDRK--------------------DAVMDKMK 386
+ILES + S L L +L L+ + R D +DK +
Sbjct: 366 KAILESF-DDEALSRLLQELDALPELESLIRSAIDPDAPATITEGGIIRAGFDETLDKYR 424
Query: 387 EYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRG 437
+ + E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 425 KVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKN 484
Query: 438 GVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 485 SERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQS 544
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNL 556
++ T YVRP +V++Q RH +VE GV YIPN + F S + + L
Sbjct: 545 LAV--TAETNHYVRPVFN--DEHRIVIDQGRHAVVEKVMGVQEYIPNTITFDS-QTNVQL 599
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSIDLPVFDAIYTRIGAADDLISGQSTFM 659
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE
Sbjct: 660 VEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHE 719
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+LE+A
Sbjct: 720 LTALSNTLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPADLLERADT 779
Query: 737 LMKEYEYSLDTKTP 750
++ + E T P
Sbjct: 780 ILTQLEGETVTIQP 793
>gi|418016939|ref|ZP_12656498.1| DNA mismatch repair protein MutS [Streptococcus salivarius M18]
gi|345527632|gb|EGX30940.1| DNA mismatch repair protein MutS [Streptococcus salivarius M18]
Length = 852
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 294/555 (52%), Gaps = 41/555 (7%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+ +PL + AI+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLVNQAAIM 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEA-SNLNTILSSLQSLKMMDRK--------------------DAVMDKM 385
+ILES N EA S L L +L L+ + R D +DK
Sbjct: 366 KAILESF--NDEALSRLLQELDALPELESLIRSAIDPDAPATITEGGIIRAGFDETLDKY 423
Query: 386 KEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVR 436
++ + E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 424 RKVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLK 483
Query: 437 GGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLV 496
RF LA + + + T + I V Y L L+ +A DVL
Sbjct: 484 NSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQ 543
Query: 497 SFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFN 555
S ++ T YVRP +V++Q RH +VE GV YIPN + F S + +
Sbjct: 544 SLAV--TAETNHYVRPVFN--DEHRIVIDQGRHAVVEKVMGVQEYIPNTITFDS-QTNVQ 598
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
L+TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STF
Sbjct: 599 LITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQSTF 658
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+H
Sbjct: 659 MVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYH 718
Query: 676 EIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
E+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+LE+A
Sbjct: 719 ELTALSNTLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPADLLERAD 778
Query: 736 DLMKEYEYSLDTKTP 750
++ + E T P
Sbjct: 779 TILTQLEGETVTIQP 793
>gi|389582008|dbj|GAB64408.1| DNA mismatch repair enzyme [Plasmodium cynomolgi strain B]
Length = 843
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 211/748 (28%), Positives = 369/748 (49%), Gaps = 110/748 (14%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL---PAEYLNDNKNKIVTIL 145
G+ I +++T +F + E ++++++ LE++++Q P C L + L+D + K++ L
Sbjct: 49 AGICIYNMNTNEFSLCEYIENEHFTILESMLIQCRPT-CFLYLSSNDKLDDKRIKLILSL 107
Query: 146 DRNKVCMTGRKKNEFSEEDLMQ-DVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
K G KN+F M+ D+++L++ ++KN + L A S++ Y
Sbjct: 108 CEIKYRELG--KNDFYNTYSMENDLSKLLK-PTEDVKNC--ISFFKLQLACRSFNSIVKY 162
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSL-----HVLPQQGSTSAQTYD-SLLGI 258
++L+N+ N+ + + + ++Y+ + A +L H+L ++ + ++ + +L
Sbjct: 163 MKLLNDYSATNKCVLTNYNINRYLKLDMAATIALNVHAEHMLGEKKTKCSRGSNLTLFTF 222
Query: 259 LDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQS 318
L++C+T G R L QW+ P++D I ER V+IL + R + LR + D+
Sbjct: 223 LNKCKTKIGERKLLQWVMHPIRDEAKINERLDMVSILKEDGVMRSMIQSDYLRKISDLDV 282
Query: 319 LAMRI-------------------------------GRKKAGLKDCYRVYEGVS------ 341
+ ++ G+ L+D ++Y+ V
Sbjct: 283 IIKKLKIVNSATVEGEEVDGARKMGGGQMGGSKIGGGKNACSLEDLVKMYDSVVVSKRIY 342
Query: 342 ---------------------------QLPKLISILESLVQNVEASNLNTILSSL---QS 371
L + ++E V E N N ++S Q
Sbjct: 343 YCLNDYEGKYRNTLEKKFLMPLKEVLISLDSFVKLIELTVDFDELCNNNFLISRKFDEQL 402
Query: 372 LKMMDRKDAVMDKMKE----------YLESTARRLNLV-ADKTIKL-ENSPQGFAYRITM 419
K+ KD ++ +K YL+ ++ N A + IKL + + F +R
Sbjct: 403 EKLASEKDQILQMIKHHRQEVEDDINYLKGVTKKNNAKNAKEDIKLVDCNVNTFLFRAVK 462
Query: 420 KLNNSIDDR---YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
K +SI R Y + + + F ++L +Y I ++Y Q+ + + I +++
Sbjct: 463 KDMSSIQQRKKTYFQMRMNKSEILFTTNKLKDLCKRYDYILQDYNLSQEQLASKAIQVAS 522
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + +L+ ++AQ DVL +F+ S + YVRP ++ G L L + RHP+VE
Sbjct: 523 SYWEPTTKLAKLIAQIDVLCAFAFISASSLSVYVRPIVETNGQ-VLHLIESRHPLVESNF 581
Query: 537 GV--SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
+ ++IPNDV+ + N++TGPNMGGKSTYIR I + +AQIGCFVPC A + +
Sbjct: 582 LLMNNFIPNDVHMNKTDKRLNIITGPNMGGKSTYIRQIALICLMAQIGCFVPCTYAKMPI 641
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
QI RVG++D Q +GISTF EM E + +IK EN+LVIIDELGRGTST++GFG++
Sbjct: 642 FSQIMCRVGSSDIQLKGISTFFSEMIEISAIIKNADENTLVIIDELGRGTSTYEGFGISW 701
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
++A+ + + + F LFATHFHE++ L N +S LY+++ G K
Sbjct: 702 AVAQYILNKIKCFCLFATHFHEMSNLEEEYQGATNNHIS---------FLYEIRKGYADK 752
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYGVH A++A P++++++A + KE E
Sbjct: 753 SYGVHVAQIAKLPQNVIDKAFEKSKELE 780
>gi|167385347|ref|XP_001737309.1| DNA mismatch repair protein MsH2 [Entamoeba dispar SAW760]
gi|165899926|gb|EDR26406.1| DNA mismatch repair protein MsH2, putative [Entamoeba dispar
SAW760]
Length = 630
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 279/532 (52%), Gaps = 42/532 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L L+R T G +++ +W++QPL D D I +R V N+E R+ + L +
Sbjct: 30 TLFKHLNRTHTKIGEKMIKEWIRQPLIDKDKINKRLELVEGFYENSEIRLKIKNEELAIM 89
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGV---------------SQLPK-LISILESLVQNV 357
PD++ L G K+ L+ ++YE V ++ K +I LE + + +
Sbjct: 90 PDLEKLIK--GINKSDLESIVKLYEAVRISKSIKEELKEMNNKEIEKEIIEPLERISEEM 147
Query: 358 EA-SNLNTILSSLQS-----LKMMDRKDAVMDKMKEY-----------LESTARRLNLVA 400
E + L ++ K+ + D + K++E LE A LN+
Sbjct: 148 EKFEEMVVTLIDIEETKNHVFKIREDFDEGLQKIRENHKKVEELFEKCLEQAANDLNIKT 207
Query: 401 DKTIKLENSPQGFAYRIT--MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
DK IK+ R++ + + +YTI+ T++G +F + T N + +
Sbjct: 208 DK-IKIIEHNNNLILRVSKSNEKEVKKNKKYTIIQTLKGECKFTFKEMQTLNVKRDKLNL 266
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ E + +EE+ + GY +T +L +++ D + SF+ S + Y +P +
Sbjct: 267 KEEEINKKFIEEINKVIEGYKETFKELENIIGYIDCIQSFATVSNDNNQGYAKPRIYESE 326
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
G + + + RHP++E ++I ND+ E F ++TGPNMGGKSTY+R IG+ V +
Sbjct: 327 KGIIKIKKARHPLIENNSINTFIENDIDINRKETRFQIITGPNMGGKSTYLRMIGLCVIM 386
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQIG F+PC A IS+ D+I R+GA D+ G+STFM EMK+T+ +IKK T+NSLV+ID
Sbjct: 387 AQIGMFIPCSEADISICDKIMCRIGAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLID 446
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
ELGRGTST+DGFG+A I+ LA + +FATHFHEI L + + N V A +
Sbjct: 447 ELGRGTSTYDGFGIAWGISEYLAIDIGCYCVFATHFHEITGLEKRVNGVINKHVEADIID 506
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
LVL Y++K GS +S ++ A+ A +P +++E A+ KE LD P
Sbjct: 507 KQLVLKYKIKNGSTDQSLAIYVAEWADFPHEVVESAKRKAKE----LDLDQP 554
>gi|342184662|emb|CCC94144.1| putative DNA mismatch repair protein [Trypanosoma congolense
IL3000]
Length = 607
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/539 (33%), Positives = 286/539 (53%), Gaps = 65/539 (12%)
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RL+ QW+ QPL++ + I +R + V I+V N R +L LR DM L ++ R+
Sbjct: 2 GSRLMRQWLLQPLQNTEEINQRLSLVEIMVENPILRDSLISQVLRRCSDMDKLNRKLQRR 61
Query: 327 KAGLKDCYRVYEGVSQLPKLISIL-------------ESLVQNVEA-----SNLNTILSS 368
LKD V + +P+ + +L E V +E NL T++ +
Sbjct: 62 TVALKDLQSVLLFANTVPQAVEVLRKYHGGRDNKLLLEEFVAPLEDIAEHFVNLRTLIGA 121
Query: 369 LQSL----------KMMDRKDAVMDKMKEYLESTARRLNLV------ADKTIKLE-NSPQ 411
+L + D A+ + + ++S R V +K +K E ++
Sbjct: 122 TVNLSDENNARINPEFDDDLHALEQQRQSVIKSIEREHQRVLKQFRWTEKQMKCEYHTLH 181
Query: 412 GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G+ +R++ K + + D + L T + GVRF +L++ + QY+ I ++YE QQ++ +
Sbjct: 182 GYVFRVSRKDDAQVRADKEFITLGTTKDGVRFVSGQLSSLSEQYRGISKDYEERQQALKQ 241
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK-PMGTGSL------ 522
++I A Y L+ +++A DV V++++ + +P VRP ++ P+ SL
Sbjct: 242 KLIDTVATYLPVLDDAKELIAALDVFVAWALVVKDSSRPMVRPTVRTPLNEASLQECNNN 301
Query: 523 -----------------VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGK 565
+ RHP+VEL+ ++IPN V+ + + + ++TGPNMGGK
Sbjct: 302 NNNNNGSNNDSNNNNIVTIVNARHPLVELRQP-AFIPNTVHL-TNDANALIITGPNMGGK 359
Query: 566 STYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATV 625
ST++RSIG+ V LAQ GCFVP +SA I V D + RVGA D +G+STFM+EM E+A +
Sbjct: 360 STFMRSIGICVVLAQAGCFVPAESADIVVRDAVMCRVGATDHLAQGVSTFMVEMLESAAM 419
Query: 626 IKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP 685
+ T +L I+DELGRGTST+DGFG+A +IA+E+A LF+THFHE+ L+
Sbjct: 420 LNSATRQTLAIVDELGRGTSTYDGFGLAWAIAQEVAVKLNSTLLFSTHFHEMTQLAEKHA 479
Query: 686 TFRNVQVSALEQ--EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+N A E L YQ++PG C +SYG++ A++A P+D+L AR+ E E
Sbjct: 480 NVKNFHFGAHEDVTTGTLRFSYQLQPGPCGRSYGLYVAQLANIPDDVLGAAREKASELE 538
>gi|84784028|gb|ABC61979.1| Msh2-like protein [Trichomonas vaginalis]
Length = 851
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 297/568 (52%), Gaps = 50/568 (8%)
Query: 213 NMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLA 272
N+ +++I S+++ + + ++L++ P + S+ +L+ C TP G RLL
Sbjct: 229 NLPEYTIKKFTLSEFMTVDYSAAAALNIFPDGEANRTGLPTSIFALLNICSTPMGSRLLQ 288
Query: 273 QWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKD 332
Q M QPL + I +R V + E R H+ ++ LPD++ + + R KA L D
Sbjct: 289 QMMLQPLLNPAEINKRLDIVEAFIRENEIRNQTHQI-MKQLPDVERIMRKFKRGKATLPD 347
Query: 333 CYRVYEGVSQLPKLISILESLVQNVE---------ASNLN--------TILSSL------ 369
C ++Y+ S + K S V + + N+N TI SL
Sbjct: 348 CVKLYDVASVVEKFDFFTSSNVAEFKDFLDEITECSENINKAKTLIEATIDFSLIPEHIY 407
Query: 370 -----------QSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSP--QGFAYR 416
+S + +D A M+K ++ + + D +K+E + + F R
Sbjct: 408 RIKPSFDPGLSESAEKIDEIKAAMEKKRQKIAKNC----CIEDDKLKIERAANQKSFYLR 463
Query: 417 ITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
I + + I D TIL+T + GV F + + ++ EY Q+ I + ++
Sbjct: 464 IPRNMESKIRSDSTVTILETRKDGVHFITPSIKKMADEIITLESEYSVKQREIQKTLLET 523
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVEL 534
++ +LS+V A+ D+ + +A + A YVRP + +G+ + L Q RHPI+E
Sbjct: 524 LTEFSPVFEKLSEVFAKIDLFCA--LAQSAAANQYVRPKLSDVGSPEINLVQARHPILEK 581
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
V++I ND+ + G SF +++GPN GKST+++++G V++A IG FVPC ATI +
Sbjct: 582 H--VNFIANDIKMQKGTSSFIIISGPNSAGKSTFLKTVGCCVYMAHIGSFVPCSEATIPI 639
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
+ I RVGA+DS +STF EM E A++++ + NSLVIIDELGR TS DGFG+A
Sbjct: 640 IPSIHARVGASDS--LNMSTFTFEMTEMASILESASANSLVIIDELGRSTSCSDGFGLAW 697
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
+I+++LA+ FTLFATHFHE+ L + I +N + A + ED L ++Y G
Sbjct: 698 AISKKLANGIGAFTLFATHFHELCNLEQEISCVKNFHMKA-DSEDCLRMMYTFAEGPFGD 756
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
S+G+ A+ AG+P ++++ AR+ +++ E
Sbjct: 757 SFGIDAAERAGFPSEVMKAAREKVEQLE 784
>gi|312863960|ref|ZP_07724197.1| DNA mismatch repair protein MutS [Streptococcus vestibularis F0396]
gi|322517652|ref|ZP_08070517.1| DNA mismatch repair protein HexA [Streptococcus vestibularis ATCC
49124]
gi|311100526|gb|EFQ58732.1| DNA mismatch repair protein MutS [Streptococcus vestibularis F0396]
gi|322123729|gb|EFX95314.1| DNA mismatch repair protein HexA [Streptococcus vestibularis ATCC
49124]
Length = 852
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 186/554 (33%), Positives = 292/554 (52%), Gaps = 39/554 (7%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+ +PL + I
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLVNQATIT 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTILSSLQSLKMMDRK--------------------DAVMDKMK 386
+ILES ++ S L L +L L+ + R D +DK +
Sbjct: 366 KAILESFNEDA-LSRLLQELDALPELESLIRSAIDPDAPATITEGGIIRAGFDETLDKYR 424
Query: 387 EYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRG 437
+ + E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 425 KVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKN 484
Query: 438 GVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 485 SERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVECYIDRLQSLAKAIATVDVLQS 544
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNL 556
++ + YVRP +V++Q RH +VE GV YIPN + F S + + L
Sbjct: 545 LAVIAET--NHYVRPVFNE--EHRIVIDQGRHAVVEKVMGVQEYIPNTITFDS-QTNVQL 599
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + +SV +AQ+G +VP DS + + D I+TR+GAAD G STFM
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPIFDAIYTRIGAADDLISGQSTFM 659
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE
Sbjct: 660 VEMMEANQAIKRGTPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHE 719
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ LS +P NV V+ LE++ + L+++ G KSYG+H AK+AG P D+LE+A
Sbjct: 720 LTALSNSLPHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPADLLERAGT 779
Query: 737 LMKEYEYSLDTKTP 750
++ + E T P
Sbjct: 780 ILTQLEGETVTIQP 793
>gi|386343654|ref|YP_006039818.1| mismatch repair ATPase [Streptococcus thermophilus JIM 8232]
gi|339277115|emb|CCC18863.1| mismatch repair ATPase (MutS family) [Streptococcus thermophilus
JIM 8232]
Length = 852
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 287/546 (52%), Gaps = 39/546 (7%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPII 365
Query: 347 ISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------KDAVMDKMKEYL 389
+ILES + S L L +L L+ + R +D D + +Y
Sbjct: 366 KAILESFNDDA-LSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDDTLDKYR 424
Query: 390 ESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRG 437
+ + + +AD T+K++ N G+ + +T + + D + T++
Sbjct: 425 KVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKN 484
Query: 438 GVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 485 SERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQS 544
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNL 556
++ T YVRP + +++ RH +VE GV YIPN + F S + + L
Sbjct: 545 LAV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQL 599
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFM 659
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE
Sbjct: 660 VEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHE 719
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A
Sbjct: 720 LTALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADT 779
Query: 737 LMKEYE 742
++ + E
Sbjct: 780 ILTQLE 785
>gi|387783192|ref|YP_006069275.1| DNA mismatch repair protein mutS [Streptococcus salivarius JIM8777]
gi|338744074|emb|CCB94440.1| DNA mismatch repair protein mutS [Streptococcus salivarius JIM8777]
Length = 852
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 290/546 (53%), Gaps = 39/546 (7%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+ +PL + AI+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLVNQAAIM 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTILSSLQSLKMMDRK--------------------DAVMDKMK 386
+ILES + S L L +L L+ + R D +DK +
Sbjct: 366 KAILESF-DDEALSRLLQELDALPELESLIRSAIDPDAPATITEGGIIRAGFDETLDKYR 424
Query: 387 EYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRG 437
+ + E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 425 KVMSEGTSWIADIEAKEREASGIATLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKN 484
Query: 438 GVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 485 SERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQS 544
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNL 556
++ + YVRP +V++Q RH +VE GV YIPN + F S + + L
Sbjct: 545 LAVIAET--NHYVRPVFN--DEHRIVIDQGRHAVVEKVMGVQEYIPNTITFDS-QTNVQL 599
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQSTFM 659
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE
Sbjct: 660 VEMMEANQAIKRATLNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHE 719
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+LE+A
Sbjct: 720 LTALSNTLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPADLLERADT 779
Query: 737 LMKEYE 742
++ + E
Sbjct: 780 ILTQLE 785
>gi|421451444|ref|ZP_15900805.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|421453480|ref|ZP_15902836.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|400181789|gb|EJO16056.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|400181875|gb|EJO16137.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
Length = 852
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 290/547 (53%), Gaps = 41/547 (7%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+ +PL + I
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLVNQATIT 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEA-SNLNTILSSLQSLKMMDRK--------------------DAVMDKM 385
+IL+S N EA S L L +L L+ + R D +DK
Sbjct: 366 KAILDSF--NDEALSRLLQELDALPELESLIRSAIDPDAPATITEGGIIRAGFDETLDKY 423
Query: 386 KEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVR 436
++ + E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 424 RKVMSEGTSWIADIEAKEREVSGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLK 483
Query: 437 GGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLV 496
RF LA + + + T + I V Y L L+ +A DVL
Sbjct: 484 NSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQ 543
Query: 497 SFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFN 555
S ++ + YVRP +V++Q RH +VE GV YIPN + F S + +
Sbjct: 544 SLAVVAET--NHYVRPIFN--DEHRIVIDQGRHAVVEKVMGVQEYIPNTITFDS-QTNIQ 598
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
L+TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STF
Sbjct: 599 LITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGAADDLISGQSTF 658
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+H
Sbjct: 659 MVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYH 718
Query: 676 EIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
E+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+LE+A
Sbjct: 719 ELTALSNTLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLERAD 778
Query: 736 DLMKEYE 742
++ + E
Sbjct: 779 TILTQLE 785
>gi|183234797|ref|XP_652571.2| DNA mismatch repair protein Msh2 [Entamoeba histolytica HM-1:IMSS]
gi|169800906|gb|EAL47185.2| DNA mismatch repair protein Msh2, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 630
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 278/532 (52%), Gaps = 42/532 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L L+R T G +++ +W+KQPL D D I +R V +N+ R+ + L +
Sbjct: 30 TLFKHLNRTHTKIGEKMIKEWIKQPLIDKDKINKRLELVEGFYDNSGIRLKIKNEELAII 89
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGV----------------SQLPKLISILESLVQNV 357
PD++ L G K+ L+ ++YE V S ++I LE + + +
Sbjct: 90 PDLEKLIK--GINKSDLESIVKLYEAVRISKNIKEELKEMNNKSIEKEIIEPLEKITEEM 147
Query: 358 EA-SNLNTILSSLQS-----LKMMDRKDAVMDKMKEY-----------LESTARRLNLVA 400
E + L ++ K+ + D + K++E LE A LN+
Sbjct: 148 EKFEEMVVTLIDIEETQNHVFKIREDFDEGLQKIRESHKKVEELFEKCLEQAANDLNIKT 207
Query: 401 DKTIKLENSPQGFAYRIT--MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
DK IK+ R++ + + +YTI+ T++G +F + T N + ++
Sbjct: 208 DK-IKIVEHNNNLILRVSKSNEKEVKKNKKYTIIQTLKGECKFTFKEMQTLNVKRDKLKL 266
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ E + +EE+ + GY + +L +++ D + SF+ S + Y +P +
Sbjct: 267 KEEEINKKFIEEINKVVEGYKEKFQELENMIGYIDCIQSFATVSIDNNQGYSKPTIYESE 326
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
G + + + RHP++E S+I ND+ E F ++TGPNMGGKSTY+R IG+ V +
Sbjct: 327 KGIIKIIKARHPLIENNSINSFIENDIDIDRKETRFQIITGPNMGGKSTYLRMIGLCVIM 386
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQIG FVPC A IS+ D+I R+GA D+ G+STFM EMK+T+ +IKK T+NSLV+ID
Sbjct: 387 AQIGMFVPCSEAHISICDKIMCRIGAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLID 446
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
ELGRGTST+DGFG+A +I+ LA + +FATHFHEI L + + N V A +
Sbjct: 447 ELGRGTSTYDGFGIAWAISEYLAIDIGCYCVFATHFHEITGLEKRVTGVINKHVEADIID 506
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
LVL Y++ GS +S ++ A+ A +P +++E A+ KE LD P
Sbjct: 507 KQLVLKYKINNGSTDQSLAIYVAEWADFPHEVVESAKRKAKE----LDLDQP 554
>gi|445370537|ref|ZP_21425879.1| DNA mismatch repair protein MutS [Streptococcus thermophilus MTCC
5460]
gi|445385384|ref|ZP_21427586.1| DNA mismatch repair protein MutS [Streptococcus thermophilus MTCC
5461]
gi|444751650|gb|ELW76367.1| DNA mismatch repair protein MutS [Streptococcus thermophilus MTCC
5461]
gi|444751665|gb|ELW76381.1| DNA mismatch repair protein MutS [Streptococcus thermophilus MTCC
5460]
Length = 852
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 309/591 (52%), Gaps = 38/591 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTI--LSSLQSLK-----------------MMDRKDAVMDKMKE 387
+ILES + + L + L L+SL + D D +DK ++
Sbjct: 366 KAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 426 VMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLV 557
++ T YVRP + +++ RH +VE GV YIPN + F S + + L+
Sbjct: 546 AV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE+
Sbjct: 661 EMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADTI 780
Query: 738 MKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKD 788
+ + E P ++ +++E+ +T + +FD + L + +D
Sbjct: 781 LTQLEGETVVIQPQ-EKVSSQEKPAIETHVNEQISLFDDFTENQVLQELRD 830
>gi|418027257|ref|ZP_12665929.1| MutS [Streptococcus thermophilus CNCM I-1630]
gi|354692238|gb|EHE92075.1| MutS [Streptococcus thermophilus CNCM I-1630]
Length = 852
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 290/545 (53%), Gaps = 37/545 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTI--LSSLQSLK-----------------MMDRKDAVMDKMKE 387
+ILES + + L + L L+SL + D D +DK ++
Sbjct: 366 KAILESFNDDTLSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 426 VMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLV 557
++ T YVRP + +++ RH +VE GV YIPN + F S + + L+
Sbjct: 546 AV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE+
Sbjct: 661 EMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADTI 780
Query: 738 MKEYE 742
+ + E
Sbjct: 781 LTQLE 785
>gi|183234999|ref|XP_001914132.1| DNA mismatch repair protein Msh2 [Entamoeba histolytica HM-1:IMSS]
gi|169800793|gb|EDS89090.1| DNA mismatch repair protein Msh2, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705398|gb|EMD45450.1| DNA mismatch repair protein MSH2, putative [Entamoeba histolytica
KU27]
Length = 630
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 278/532 (52%), Gaps = 42/532 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L L+R T G +++ +W+KQPL D D I +R V +N+ R+ + L +
Sbjct: 30 TLFKHLNRTHTKIGEKMIKEWIKQPLIDKDKINKRLELVEGFYDNSGIRLKIKNEELAII 89
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGV----------------SQLPKLISILESLVQNV 357
PD++ L G K+ L+ ++YE V S ++I LE + + +
Sbjct: 90 PDLEKLIK--GINKSDLESIVKLYEAVRISKNIKEELKEMNNKSIEKEIIEPLEKITEEM 147
Query: 358 EA-SNLNTILSSLQS-----LKMMDRKDAVMDKMKEY-----------LESTARRLNLVA 400
E + L ++ K+ + D + K++E LE A LN+
Sbjct: 148 EKFEEMVVTLIDIEETQNHVFKIREDFDEGLQKIRESHKKVEELFEKCLEQAANDLNIKT 207
Query: 401 DKTIKLENSPQGFAYRIT--MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
DK IK+ R++ + + +YTI+ T++G +F + T N + ++
Sbjct: 208 DK-IKIVEHNNNLILRVSKSNEKEVKKNKKYTIIQTLKGECKFTFKEMQTLNVKRDKLKL 266
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ E + +EE+ + GY + +L +++ D + SF+ S + Y +P +
Sbjct: 267 KEEEINKKFIEEINKVVEGYKEKFQELENMIGYIDCIQSFATVSIDNNQGYSKPTIYESE 326
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
G + + + RHP++E S+I ND+ E F ++TGPNMGGKSTY+R IG+ V +
Sbjct: 327 KGIIKIIKARHPLIENNSINSFIENDIDIDRKETRFQIITGPNMGGKSTYLRMIGLCVIM 386
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQIG F+PC A IS+ D+I R+GA D+ G+STFM EMK+T+ +IKK T+NSLV+ID
Sbjct: 387 AQIGMFIPCSEAHISICDKIMCRIGAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLID 446
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
ELGRGTST+DGFG+A +I+ LA + +FATHFHEI L + + N V A +
Sbjct: 447 ELGRGTSTYDGFGIAWAISEYLAIDIGCYCVFATHFHEITGLEKRVTGVINKHVEADIID 506
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
LVL Y++ GS +S ++ A+ A +P +++E A+ KE LD P
Sbjct: 507 KQLVLKYKINNGSTDQSLAIYVAEWADFPHEVVESAKRKAKE----LDLDQP 554
>gi|407043328|gb|EKE41884.1| DNA mismatch repair protein Msh2, putative [Entamoeba nuttalli P19]
Length = 630
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 278/532 (52%), Gaps = 42/532 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L L+R T G +++ +W+KQPL D D I +R V +N+ R+ + L +
Sbjct: 30 TLFKHLNRTHTKIGEKMIKEWIKQPLIDKDKINKRLELVEGFYDNSGIRLKIKNEELAII 89
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGV----------------SQLPKLISILESLVQNV 357
PD++ L G K+ L+ ++YE V S ++I LE + + +
Sbjct: 90 PDLEKLIK--GINKSDLESIVKLYEAVRISKNIKEELKEMNNKSIEKEIIEPLEKITEEM 147
Query: 358 EA-SNLNTILSSLQS-----LKMMDRKDAVMDKMKEY-----------LESTARRLNLVA 400
E + L ++ K+ + D + K++E LE A LN+
Sbjct: 148 EKFEEMVVTLIDIEETQNHVFKIREDFDEGLQKIRESHKKVEELFEKCLEQAANDLNIKT 207
Query: 401 DKTIKLENSPQGFAYRIT--MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
DK IK+ R++ + + +YTI+ T++G +F + T N + ++
Sbjct: 208 DK-IKIVEHNNNLILRVSKSNEKEVKKNKKYTIIQTLKGECKFTFKEMQTLNVKRDKLKL 266
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ E + +EE+ + GY + +L +++ D + SF+ S + Y +P +
Sbjct: 267 KEEEINKKFIEEINKVVEGYKEKFQELENMIGYIDCIQSFATVSIDNNQGYSKPTIYESE 326
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
G + + + RHP++E S+I ND+ E F ++TGPNMGGKSTY+R IG+ V +
Sbjct: 327 KGIIKIIKARHPLIENNSINSFIENDIDIDRKETRFQIITGPNMGGKSTYLRMIGLCVIM 386
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQIG F+PC A IS+ D+I R+GA D+ G+STFM EMK+T+ +IKK T+NSLV+ID
Sbjct: 387 AQIGMFIPCSEAHISICDKIMCRIGAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLID 446
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
ELGRGTST+DGFG+A +I+ LA + +FATHFHEI L + + N V A +
Sbjct: 447 ELGRGTSTYDGFGIAWAISEYLAIDIGCYCVFATHFHEITGLEKRVTGVINKHVEADIID 506
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
LVL Y++ GS +S ++ A+ A +P +++E A+ KE LD P
Sbjct: 507 KQLVLKYKINNGSTDQSLAIYVAEWADFPHEVVESAKRKAKE----LDLDQP 554
>gi|116627015|ref|YP_819634.1| DNA mismatch repair protein MutS [Streptococcus thermophilus LMD-9]
gi|122268380|sp|Q03MY4.1|MUTS_STRTD RecName: Full=DNA mismatch repair protein MutS
gi|116100292|gb|ABJ65438.1| DNA mismatch repair protein MutS [Streptococcus thermophilus LMD-9]
Length = 852
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 290/545 (53%), Gaps = 37/545 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPII 365
Query: 347 ISILESLVQNVEASNLNTI--LSSLQSLK-----------------MMDRKDAVMDKMKE 387
+ILES + + L + L L+SL + D D +DK ++
Sbjct: 366 KAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 426 VMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLV 557
++ T YVRP + +++ RH +VE GV YIPN + F S + + L+
Sbjct: 546 AV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE+
Sbjct: 661 EMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADTI 780
Query: 738 MKEYE 742
+ + E
Sbjct: 781 LTQLE 785
>gi|55822041|ref|YP_140482.1| DNA mismatch repair protein MutS [Streptococcus thermophilus
CNRZ1066]
gi|81676633|sp|Q5M1Z0.1|MUTS_STRT1 RecName: Full=DNA mismatch repair protein MutS
gi|55738026|gb|AAV61667.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
Length = 852
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 290/545 (53%), Gaps = 37/545 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLAE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTI--LSSLQSLK-----------------MMDRKDAVMDKMKE 387
+ILES + + L + L L+SL + D D +DK ++
Sbjct: 366 KAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 426 VMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLV 557
++ T YVRP + +++ RH +VE GV YIPN + F S + + L+
Sbjct: 546 AV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE+
Sbjct: 661 EMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADTI 780
Query: 738 MKEYE 742
+ + E
Sbjct: 781 LTQLE 785
>gi|55820153|ref|YP_138595.1| DNA mismatch repair protein MutS [Streptococcus thermophilus LMG
18311]
gi|81676784|sp|Q5M6I1.1|MUTS_STRT2 RecName: Full=DNA mismatch repair protein MutS
gi|55736138|gb|AAV59780.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
Length = 852
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 290/545 (53%), Gaps = 37/545 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTI--LSSLQSLK-----------------MMDRKDAVMDKMKE 387
+ILES + + L + L L+SL + D D +DK ++
Sbjct: 366 KAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 426 VMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLV 557
++ T YVRP + +++ RH +VE GV YIPN + F S + + L+
Sbjct: 546 AV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE+
Sbjct: 661 EMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADTI 780
Query: 738 MKEYE 742
+ + E
Sbjct: 781 LTQLE 785
>gi|20807804|ref|NP_622975.1| DNA mismatch repair protein MutS [Thermoanaerobacter tengcongensis
MB4]
gi|44888228|sp|Q8RA71.1|MUTS_THETN RecName: Full=DNA mismatch repair protein MutS
gi|20516362|gb|AAM24579.1| MutS-like ATPases involved in mismatch repair, family 2
[Thermoanaerobacter tengcongensis MB4]
Length = 869
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 214/694 (30%), Positives = 352/694 (50%), Gaps = 72/694 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T + Y EI + + I + SP E + E+L +NK + + N
Sbjct: 140 GICAVDVTTGELYATEIKNCKNGKRIYDEIAKYSPSEIISNEEFLKNNK--YIKVFKNNN 197
Query: 150 VCMTGRK--KNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ K E S E + + ++ + ++ EL++ + + H L +L++YL+
Sbjct: 198 CAVNAYKPLNYEASSELIEKQFDK--KVEELELEDKKFV--------IHSLGALLSYLKE 247
Query: 208 MNNED--NMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+ ++N+ +++ D S Y+ + S + +L +L + S + SLLG+LDR TP
Sbjct: 248 LQKTSLKHINKLTLYQ-DNS-YMGLDSNAIRNLEILESNRNKSKKG--SLLGVLDRTVTP 303
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL +W+++PL D D I +R AV L NN R+ L E L + D++ LA +I
Sbjct: 304 MGGRLLKKWLEEPLIDKDEIEKRLDAVEELFNNYRERIELKEL-LNKVYDLERLASKIVY 362
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK----MMDR--KD 379
+ KD + + LPK+ +IL + L I L L+ ++D+ KD
Sbjct: 363 QSVTPKDFISIKLSLQNLPKIKNILSKFSSRL----LKEIYEKLDVLQDVYELIDKSIKD 418
Query: 380 AVMDKMKE-------YLE--------STARR---LNLVADKTIK--LENSPQG----FAY 415
+++KE Y E ST + NL AD+ K ++N G F Y
Sbjct: 419 DPSNQLKEGNIIKDGYNEMVDKLRKASTEGKNWIANLEADEREKTGIKNLRIGYNKVFGY 478
Query: 416 RITMKLNN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIV 468
I + +N + DRY T+ R+ L + + I+ EYE + +
Sbjct: 479 YIEVTKSNIPQVPDRYIRKQTLANAERYVTPELKEIEETILGAEEKLIELEYELFNE--I 536
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
E + + Q + +A DVL+SF A YV+P + +V+ + R
Sbjct: 537 REKVELQIVRIQNT---AKYIAIIDVLISF--AEVAETNKYVKPIVD--YEDRIVIKEGR 589
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
HP+VE ++ ND+ E ++TGPNM GKSTY+R + + V +AQ+GCFVP
Sbjct: 590 HPVVETISDEGFVANDIDI-GPENPIMIITGPNMAGKSTYMRQVALIVLMAQVGCFVPAS 648
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
A I +VD+IFTRVGA+D + G STFM+EM E A ++ T SL+I+DE+GRGTST+D
Sbjct: 649 YARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILHSATSKSLIILDEVGRGTSTYD 708
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
G +A ++ + + TLFATH+HE+ L + RN VS E+ED+++ L+++
Sbjct: 709 GMSIAQAVIEYIHEKIKAKTLFATHYHELTKLEGKLRGVRNFNVSVEEREDDIIFLHKIV 768
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
PG +SYG+ +K+AG P ++E+A+++++ E
Sbjct: 769 PGGSDRSYGIQVSKLAGLPYSIIERAKEILEALE 802
>gi|387762216|ref|YP_006069193.1| DNA mismatch repair protein MutS [Streptococcus salivarius 57.I]
gi|339292983|gb|AEJ54330.1| DNA mismatch repair protein MutS [Streptococcus salivarius 57.I]
Length = 852
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 291/554 (52%), Gaps = 39/554 (7%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+ +PL + AI+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLVNQAAIM 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTILSSLQSLKMMDRK--------------------DAVMDKMK 386
+ILES + S L L +L L+ + R D +DK +
Sbjct: 366 KAILESFNDDA-LSGLLQDLDTLPELESLIRSAIDPDAPATITEGGIIRAGFDETLDKYR 424
Query: 387 EYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRG 437
+ + E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 425 KVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKN 484
Query: 438 GVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
RF LA + + + T + I V Y L L+ +A DVL
Sbjct: 485 SERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQIERYIDRLQSLAKAIATVDVLQG 544
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNL 556
++ + YVRP +V++Q RH +VE GV YIPN + F S + + L
Sbjct: 545 LAVVAET--NHYVRPVFN--DEHRIVIDQGRHAVVEKVMGVQEYIPNTITFDS-QTNVQL 599
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GA+D G STFM
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPVFDAIYTRIGASDDLISGQSTFM 659
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE
Sbjct: 660 VEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHE 719
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+LE+A
Sbjct: 720 LTALSNTLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPADLLERADT 779
Query: 737 LMKEYEYSLDTKTP 750
++ + E T P
Sbjct: 780 ILTQLEGETVTIQP 793
>gi|419707083|ref|ZP_14234586.1| DNA mismatch repair protein mutS [Streptococcus salivarius PS4]
gi|383283168|gb|EIC81129.1| DNA mismatch repair protein mutS [Streptococcus salivarius PS4]
Length = 852
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 305/592 (51%), Gaps = 40/592 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+ +PL + I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLVNQATIM 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTILSSLQSLKMMDRK--------------------DAVMDKMK 386
+ILES + ++ L L +L L+ + R D +DK +
Sbjct: 366 KAILESFNDDALSALLQD-LDTLPELESLIRSAIDPDAPATITEGGIIRAGFDETLDKYR 424
Query: 387 EYLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRG 437
+ + + + K T+K++ N G+ + +T + + D + T++
Sbjct: 425 KVMSEGTSWIADIEVKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKN 484
Query: 438 GVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 485 SERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQS 544
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNL 556
++ + YVRP +V++Q RH +VE GV YIPN + F S + + L
Sbjct: 545 LAVVAET--NHYVRPIFN--DEHRIVIDQGRHAVVEKVMGVQEYIPNTITFDS-QTNVQL 599
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + +SV +AQ+G +VP DS + + D I+TR+GAAD G STFM
Sbjct: 600 ITGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPIFDAIYTRIGAADDLISGQSTFM 659
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE
Sbjct: 660 VEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHE 719
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+LE+A
Sbjct: 720 LTALSNTLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPADLLERADT 779
Query: 737 LMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKD 788
++ + E T P ++ + +E+ +T + +FD + L + +D
Sbjct: 780 ILTQLEGDTVTIQPQ-EKVSPQEKTVTETHVNEQISLFDDFTENPVLQELRD 830
>gi|221222520|sp|A4G717.3|MUTS_HERAR RecName: Full=DNA mismatch repair protein MutS
gi|193222369|emb|CAL62304.2| DNA mismatch repair protein MutS [Herminiimonas arsenicoxydans]
Length = 893
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 275/536 (51%), Gaps = 48/536 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L +LD CRT G RLL W+ +D RHAA+N L+ T+A L L +
Sbjct: 312 TLFSLLDHCRTAMGSRLLRHWLHHARRDQAVARARHAAINALMR-TDACTGL-ASTLASV 369
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS-- 371
PD++ +A RI + A +D + G+ QLP L + + Q+ +A L TI +L +
Sbjct: 370 PDVERIATRIALQSARPRDLAGMRGGLQQLPSLRAYVSMCNQDADAPLLKTIHDALATPS 429
Query: 372 --LKMMDRK-------------------DAVMDKMKEYLESTA--------RRLNLVADK 402
L +++R DA +D+++ E+ R
Sbjct: 430 ECLDLVERAIALEPAAMVRDGGVIARGFDAELDELRGLSENAGQFLVDLETRERTRTGIN 489
Query: 403 TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+++E N GF +T + + D Y T++ R+ L + + Q
Sbjct: 490 NLRVEYNKVHGFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERAL 549
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS----TCAPKPYVRPCMKPM 517
++ + ++V+ A + TL ++ LAQ D LV+ + + CAP+ P
Sbjct: 550 AREKYLYDQVLQQMAQHIGTLQNIAHALAQLDTLVALAEHALRHNWCAPQLIAEP----- 604
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
++ + Q RHP+VE +I ND + E L+TGPNMGGKSTY+R + +
Sbjct: 605 ---TIAIEQGRHPVVE-NHIERFIANDCLLNN-ESRLLLITGPNMGGKSTYMRQVALITL 659
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA +G FVP SATI +D+IFTR+GAAD G STFM+EM E+A ++ TENSLV++
Sbjct: 660 LAYVGSFVPATSATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLM 719
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTSTFDG +A +IAR L + FTLFATH+ E+ L V P+ NV +SA+E
Sbjct: 720 DEVGRGTSTFDGLALAWAIARHLIDSTRSFTLFATHYFELTQLPEVHPSAANVHLSAVEH 779
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+D++V L+ V+ G +SYG+ A++AG P+ ++ AR + E + TP D
Sbjct: 780 KDSIVFLHAVQAGPASQSYGLQVAQLAGVPQAVIRAARKHLATLEANSMQATPQFD 835
>gi|386085761|ref|YP_006001635.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
ND03]
gi|387908858|ref|YP_006339164.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
MN-ZLW-002]
gi|312277474|gb|ADQ62131.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
ND03]
gi|387573793|gb|AFJ82499.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
MN-ZLW-002]
Length = 852
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 309/591 (52%), Gaps = 38/591 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTI--LSSLQSLK-----------------MMDRKDAVMDKMKE 387
+ILES + + L + L L+SL + D D +DK ++
Sbjct: 366 KAILESFNDDTLSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 426 VMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLV 557
++ T YVRP + +++ RH +VE GV YIPN + F S + + L+
Sbjct: 546 AV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE+
Sbjct: 661 EMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TALSNSLIHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADTI 780
Query: 738 MKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKD 788
+ + E P ++ +++E+ +T + +FD + L + +D
Sbjct: 781 LTQLEGETVVIQPQ-EKVSSQEKPAIETHVNEQISLFDDFTENPVLQELRD 830
>gi|340057676|emb|CCC52022.1| putative DNA mismatch repair protein, fragment [Trypanosoma vivax
Y486]
Length = 963
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 300/576 (52%), Gaps = 67/576 (11%)
Query: 225 SKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDA 284
S ++ + +A + +LH++ + S+ L+RC T G R++ QW+ QPL+++D
Sbjct: 328 STFMKLDAAAIDALHIINHKQEARGSLPTSVYSWLNRCTTGMGARMMRQWLLQPLRNVDD 387
Query: 285 IVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP 344
I ER + V ++ + R +L + LR DM L ++ R+ LKD + V +P
Sbjct: 388 INERLSLVEMMNESPILRDSLVSHVLRRCNDMDRLNRKLQRRTLSLKDVQCILVFVDTIP 447
Query: 345 KLISILESLVQ------------------NVEASNLNTILSSLQSL---------KMMDR 377
I +L + + N SNL T++++ +L D
Sbjct: 448 HAIEVLRTYSRGRNTKLLLDEYVAPLEDINEHFSNLRTLINATINLDDENVARINPEFDS 507
Query: 378 KDAVMDKMK----EYLESTARRL---NLVADKTIKLE-NSPQGFAYRITMKLNNSI--DD 427
++K + E ++ RR+ + +KT+K E ++ G+ +R++ K + + D
Sbjct: 508 DLGELEKQRQSVVEAIDKEHRRVMREHKWTEKTVKCEYHATYGYVFRVSRKDDQQVRTSD 567
Query: 428 RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSD 487
+ + T + GVRF L++ N QY+ I R+Y+ QQ + +++I A Y L+ +
Sbjct: 568 KLITVSTAKDGVRFLSGALSSLNEQYKGICRDYDMRQQDLKQKLIDTVATYLPVLDDAKE 627
Query: 488 VLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS-------------------LVLNQCR 528
++A + +P P VRP ++ + + L + R
Sbjct: 628 LIAALGRVRD-------SPLPMVRPTVRQVRSEEEAQSNSNGGGSPGSSENSVLTIVNAR 680
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
HP+VEL+ +Y+PN + + + ++TGPNMGGKST++RSIG+ V LAQ GCFVP +
Sbjct: 681 HPLVELRQP-NYVPNTLQLTADSNAI-VITGPNMGGKSTFMRSIGICVVLAQAGCFVPAE 738
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
+A I V D I RVGA D +G+STFM+EM E+A ++ T+N+L IIDELGRGTST+D
Sbjct: 739 AADIVVRDAIMCRVGAMDHLAQGVSTFMVEMLESAAILNCATQNTLAIIDELGRGTSTYD 798
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA--LEQEDNLVLLYQ 706
GFG+A +IA+E+A + LF+THFHE+ L+ RN A + L YQ
Sbjct: 799 GFGLAWAIAQEVAVGIKSTLLFSTHFHEMTRLANQHSNVRNAHFGADVDTKSGTLRFSYQ 858
Query: 707 VKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++PG+C +S G++ A++A PE+++ AR E E
Sbjct: 859 LQPGACERSCGLYVAQLAHIPEEVVNAARRKAAELE 894
>gi|134095352|ref|YP_001100427.1| DNA mismatch repair protein MutS [Herminiimonas arsenicoxydans]
Length = 870
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 275/536 (51%), Gaps = 48/536 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L +LD CRT G RLL W+ +D RHAA+N L+ T+A L L +
Sbjct: 289 TLFSLLDHCRTAMGSRLLRHWLHHARRDQAVARARHAAINALMR-TDACTGL-ASTLASV 346
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS-- 371
PD++ +A RI + A +D + G+ QLP L + + Q+ +A L TI +L +
Sbjct: 347 PDVERIATRIALQSARPRDLAGMRGGLQQLPSLRAYVSMCNQDADAPLLKTIHDALATPS 406
Query: 372 --LKMMDRK-------------------DAVMDKMKEYLESTA--------RRLNLVADK 402
L +++R DA +D+++ E+ R
Sbjct: 407 ECLDLVERAIALEPAAMVRDGGVIARGFDAELDELRGLSENAGQFLVDLETRERTRTGIN 466
Query: 403 TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+++E N GF +T + + D Y T++ R+ L + + Q
Sbjct: 467 NLRVEYNKVHGFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERAL 526
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS----TCAPKPYVRPCMKPM 517
++ + ++V+ A + TL ++ LAQ D LV+ + + CAP+ P
Sbjct: 527 AREKYLYDQVLQQMAQHIGTLQNIAHALAQLDTLVALAEHALRHNWCAPQLIAEP----- 581
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
++ + Q RHP+VE +I ND + E L+TGPNMGGKSTY+R + +
Sbjct: 582 ---TIAIEQGRHPVVE-NHIERFIANDCLLNN-ESRLLLITGPNMGGKSTYMRQVALITL 636
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA +G FVP SATI +D+IFTR+GAAD G STFM+EM E+A ++ TENSLV++
Sbjct: 637 LAYVGSFVPATSATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLM 696
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTSTFDG +A +IAR L + FTLFATH+ E+ L V P+ NV +SA+E
Sbjct: 697 DEVGRGTSTFDGLALAWAIARHLIDSTRSFTLFATHYFELTQLPEVHPSAANVHLSAVEH 756
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+D++V L+ V+ G +SYG+ A++AG P+ ++ AR + E + TP D
Sbjct: 757 KDSIVFLHAVQAGPASQSYGLQVAQLAGVPQAVIRAARKHLATLEANSMQATPQFD 812
>gi|339300553|ref|ZP_08649697.1| DNA mismatch repair protein HexA [Streptococcus agalactiae ATCC
13813]
gi|319745995|gb|EFV98277.1| DNA mismatch repair protein HexA [Streptococcus agalactiae ATCC
13813]
Length = 858
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 203/723 (28%), Positives = 355/723 (49%), Gaps = 73/723 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREIVVGYQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIIVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTSSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAEN--HHYVRP--KFNDEHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM GKSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + T+FATH+HE+ LS + NV V+ LE++ + L++++PG KS
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIEPGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTKTPSGDETNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E L P T + EE Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDILSQLEADAVQLIVSAPQEAVTADLNEELDPGKQQGQLS 819
Query: 773 MFD 775
+F+
Sbjct: 820 LFE 822
>gi|336065176|ref|YP_004560035.1| DNA mismatch repair protein [Streptococcus pasteurianus ATCC 43144]
gi|334283376|dbj|BAK30949.1| DNA mismatch repair protein [Streptococcus pasteurianus ATCC 43144]
Length = 856
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 190/688 (27%), Positives = 340/688 (49%), Gaps = 72/688 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F+ + D +++L + I+ +E ++
Sbjct: 137 TFGLAYMDVSTGEFFSTSLSD---FTSLRSEILNLKAREIVV------------------ 175
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
G + +E + L++ +N L+ F+ ++ L+ L+ Y+
Sbjct: 176 ------GYELSETEQHSLVKQLNLLLSFEQERYEDVHLIDPDLTALEISAAEKLLQYVHT 229
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS SSL +L + + +++ + SL +LD +T G
Sbjct: 230 TQKRELSHLQKLVHYEIKDYLQMSYTTKSSLDLL--ENARTSKKHGSLYWLLDETKTAMG 287
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL W+ +PL + I ER V + ++N R +L + +L+G+ D++ LA R+ K
Sbjct: 288 MRLLRNWIDRPLVNQAQIEERQNIVQVFLDNFFERSDLTD-SLKGVYDIERLASRVSFGK 346
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRK--------- 378
A KD ++ ++Q+P++ +ILES E+ +L+ +++S+ +L ++
Sbjct: 347 ANPKDLLQLGHTLAQVPRIKAILESF----ESPHLDKLVNSIDTLPELESLIRSAIDPDA 402
Query: 379 --------------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAY 415
D ++DK ++ + + V K +K++ N G+ +
Sbjct: 403 PAVITEGSIIRTGFDEILDKYRKVMREGTSWIAEVETKERAASGITNLKIDYNKKDGYYF 462
Query: 416 RITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
+T + + D + T++ RF LA + + + + + I V G
Sbjct: 463 HVTNSNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFMRVRGQV 522
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-L 534
Y L L+ L+ DVL S ++ + YVRP + + + + RH +VE +
Sbjct: 523 ERYITRLQDLAKALSSVDVLQSLAVVAEN--NHYVRPTFN--DSHEIKIEKGRHAVVEKV 578
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G YIPN + F + +++ L+TGPNM GKSTY+R + ++V +AQ+G +V +S + V
Sbjct: 579 MGTQEYIPNTITFDA-DINIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVNLPV 637
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
D IFTR+GAAD G STFM+EM E IK+ + SL++ DELGRGT+T+DG +A
Sbjct: 638 FDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASSQSLILFDELGRGTATYDGMALAQ 697
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
SI + H T+FATH+HE+ LS ++ NV V+ LE+ ++ L+++ G K
Sbjct: 698 SIIEYIHDHIGAKTMFATHYHELTALSTILTHLVNVHVATLEKNGDVTFLHKIAEGPADK 757
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYGVH AK+AG PE++L++A ++ E
Sbjct: 758 SYGVHVAKIAGLPEELLQRADSILTNLE 785
>gi|306834546|ref|ZP_07467659.1| DNA mismatch repair protein MutS [Streptococcus bovis ATCC 700338]
gi|296777692|gb|ADH43109.1| DNA mismatch repair protein MutS [uncultured bacterium MID12]
gi|304423348|gb|EFM26501.1| DNA mismatch repair protein MutS [Streptococcus bovis ATCC 700338]
Length = 856
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 190/688 (27%), Positives = 340/688 (49%), Gaps = 72/688 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F+ + D +++L + I+ +E ++
Sbjct: 137 TFGLAYMDVSTGEFFSTSLSD---FTSLRSEILNLKAREIVV------------------ 175
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
G + +E + L++ +N L+ F+ ++ L+ L+ Y+
Sbjct: 176 ------GYELSETEQHSLVKQLNLLLSFEQERYEDVHLIDPDLTALEISAAEKLLQYVHT 229
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS SSL +L + + +++ + SL +LD +T G
Sbjct: 230 TQKRELSHLQKLVHYEIKDYLQMSYTTKSSLDLL--ENARTSKKHGSLYWLLDETKTAMG 287
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL W+ +PL + I ER V + ++N R +L + +L+G+ D++ LA R+ K
Sbjct: 288 MRLLRNWIDRPLVNQAQIEERQNIVQVFLDNFFERSDLTD-SLKGVYDIERLASRVSFGK 346
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRK--------- 378
A KD ++ ++Q+P++ +ILES E+ +L+ +++S+ +L ++
Sbjct: 347 ANPKDLLQLGHTLAQVPRIKAILESF----ESPHLDKLVNSIDTLPELESLIRSAIDPDA 402
Query: 379 --------------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAY 415
D ++DK ++ + + V K +K++ N G+ +
Sbjct: 403 PAVITEGSIIRTGFDEILDKYRKVMREGTSWIAEVETKERAASGITNLKIDYNKKDGYYF 462
Query: 416 RITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
+T + + D + T++ RF LA + + + + + I V G
Sbjct: 463 HVTNSNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFMRVRGQV 522
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-L 534
Y L L+ L+ DVL S ++ + YVRP + + + + RH +VE +
Sbjct: 523 ERYITRLQDLAKALSTVDVLQSLAVVAEN--NHYVRPTFN--DSHEIKIEKGRHAVVEKV 578
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G YIPN + F + +++ L+TGPNM GKSTY+R + ++V +AQ+G +V +S + V
Sbjct: 579 MGTQEYIPNTITFDA-DINIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVNLPV 637
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
D IFTR+GAAD G STFM+EM E IK+ + SL++ DELGRGT+T+DG +A
Sbjct: 638 FDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASSQSLILFDELGRGTATYDGMALAQ 697
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
SI + H T+FATH+HE+ LS ++ NV V+ LE+ ++ L+++ G K
Sbjct: 698 SIIEYIHDHIGAKTMFATHYHELTALSTILTHLVNVHVATLEKNGDVTFLHKIAEGPADK 757
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYGVH AK+AG PE++L++A ++ E
Sbjct: 758 SYGVHVAKIAGLPEELLQRADSILTNLE 785
>gi|77408124|ref|ZP_00784870.1| DNA mismatch repair protein MutS [Streptococcus agalactiae COH1]
gi|421147491|ref|ZP_15607178.1| DNA mismatch repair protein MutS [Streptococcus agalactiae GB00112]
gi|77173224|gb|EAO76347.1| DNA mismatch repair protein MutS [Streptococcus agalactiae COH1]
gi|401685845|gb|EJS81838.1| DNA mismatch repair protein MutS [Streptococcus agalactiae GB00112]
Length = 858
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 203/723 (28%), Positives = 355/723 (49%), Gaps = 73/723 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREIVVGYQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIIVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAEN--HHYVRP--KFNDEHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM GKSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + T+FATH+HE+ LS + NV V+ LE++ + L++++PG KS
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIEPGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTKTPSGDETNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E L P T + EE Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDILSQLEADAVQLIVSAPQEAVTADLNEELDPGKQQGQLS 819
Query: 773 MFD 775
+F+
Sbjct: 820 LFE 822
>gi|221486897|gb|EEE25143.1| DNA mismatch repair protein, putative [Toxoplasma gondii GT1]
Length = 936
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 205/686 (29%), Positives = 332/686 (48%), Gaps = 102/686 (14%)
Query: 156 KKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
KKN L QD+ L+ +DS +KN + E+ L TA +L++ L++++ +
Sbjct: 125 KKNSADTASLHQDLATLLVAEDS-IKN-HISRELQLKTAAAACAALLSQARLLSDDMYIR 182
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLP-----------------QQGSTSAQTY------ 252
Q ++ + Y+ + +A ++L++ P G++ A +
Sbjct: 183 QCTLETYPLGNYLRIDNAAAAALYLFPSSLQQSQQQALLPLSAKSSGASRASSLACALSA 242
Query: 253 ----DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S+ ++ R C T G R L M QPL D I ER+ V + + R +
Sbjct: 243 GGGISSVYALMSRWCSTQLGARRLFTCMSQPLVDKKKIEERYDIVELFQTDEAFRRQVFC 302
Query: 308 YALRGLPDMQSLAMRIGR----------------KKAG--------LKDCYRVY------ 337
+ + D+ LA R R KK G L+D ++Y
Sbjct: 303 NHFKHVFDLDRLAGRFHRLASAANDLDADAAPRGKKGGIFSRVKLSLEDLVKLYDCAVEC 362
Query: 338 ---------------------------EGVSQLPKLISILESLVQNVEASNLNTILSSL- 369
E V I+++E + EA + + ++S
Sbjct: 363 TSLETTLRGYAGIHRESLEKAFTEPLSEAVKSFSTFINLVEFTIDMEEAKHGSFVISRRF 422
Query: 370 --QSLKMMDRKDAVMDKMKEYLESTARRLNLVADK----TIKL-ENSPQGFAYRITMKLN 422
+ ++D+K+ + +M + + + K +KL E++ GF R+T K
Sbjct: 423 DSELASLLDKKEELRSRMNRERQKAEDDIPFASRKRDTEIVKLIEDNTMGFVLRVTKKDQ 482
Query: 423 NSI---DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+++ RY + + + F L +++ + Y Q S+VE+ + ++A Y
Sbjct: 483 SAVLSSRGRYHQVRLNKSELIFTTSELRGLCREFKDVAEAYAAMQNSLVEKALLVAASYW 542
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVS 539
+ +L+++L DVL +F+ A+ AP PYVRP + TG LVL RHP++E+Q G S
Sbjct: 543 PAVEKLAELLGMLDVLGAFAAAANAAPMPYVRPQIVEGDTGGLVLKASRHPLLEIQPGTS 602
Query: 540 -YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
+I NDV+ E ++TGPNMGGKSTYIR + ++V LAQIG FVPC S + + Q+
Sbjct: 603 SFIANDVHLDR-ERRLAIITGPNMGGKSTYIRQVALTVLLAQIGSFVPCASCQLPIFTQV 661
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
RVGA+D Q RG+STF+ EM E A +++ + SLV+IDELGRGTST++GFG+A +IA+
Sbjct: 662 ICRVGASDIQLRGVSTFLAEMVEAAAILRNANKQSLVVIDELGRGTSTYEGFGLAWAIAK 721
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSY 716
LA+ + +LFATHFHE+ L +P N+ VSA + L LY+++ G +S+
Sbjct: 722 HLAAEAKCLSLFATHFHEMGQLCEEVPGVSNLHVSAAVNRETQQLAFLYRLQSGCVDQSF 781
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
GVH A AG P ++E+AR E E
Sbjct: 782 GVHVAGFAGLPATVVERARQKSAELE 807
>gi|195978976|ref|YP_002124220.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195975681|gb|ACG63207.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 837
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 192/634 (30%), Positives = 318/634 (50%), Gaps = 42/634 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
E SEE+ L++ +N L+ F+ + L+++ L+ L++Y+ + +
Sbjct: 169 ELSEEEQAILVKQMNLLLSFEMTALEDSPLIDHQLTAVELSAAGKLLHYVHQTQLRELSH 228
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ D Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+
Sbjct: 229 LQALVHYDIKDYLQMSYATKSSLDLL--ENARTGKKHGSLYWLLDETKTAMGMRLLRTWI 286
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L + +L+G+ D++ L+ R+ KA KD +
Sbjct: 287 DRPLVTSEAILERQEIIQVFLNAFIERTDLSD-SLKGVYDIERLSSRVSFGKANPKDLLQ 345
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------------- 372
+ ++++P + +ILE+ +N I L L+ L
Sbjct: 346 LGHTLAKVPYIKAILEAFNSPYLDKLVNQIDTLPELEHLIRSAIDPDAPATINEGNIIRT 405
Query: 373 ---KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID 426
+ +D VM + ++ E+ R+ + +++ I N G+ + +T +
Sbjct: 406 GFDERLDHYRKVMREGTGWIADIEAKERQASGISNLKIDY-NKKDGYYFHVTNSNLGMVP 464
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L QL+
Sbjct: 465 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLA 524
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ YVRP + ++ RH +VE GV YIPN +
Sbjct: 525 KALATVDVLQSLAV--VAEKNHYVRPLFNQ--ESKIAIDNGRHAVVEKVLGVQEYIPNSI 580
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQIG FV +SA++ + D IFTR+GAA
Sbjct: 581 SF-GPQTSIQLITGPNMSGKSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAA 639
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ T +SL++ DELGRGT+T+DG +A SI +
Sbjct: 640 DDLISGQSTFMVEMMEANHAIKRATPHSLILFDELGRGTATYDGMALAQSIIEYIHDRVG 699
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + NV V+ LE++ N+ L+++ G KSYG+H A++AG
Sbjct: 700 SKTMFATHYHELTELSTKLTKLVNVHVATLEKDGNVTFLHKIAEGPADKSYGIHVARIAG 759
Query: 726 YPEDMLEQARDLMKEYEYSLDTKTPSGDETNNRE 759
PED+L +A ++ + E T+ T RE
Sbjct: 760 LPEDLLARADAVLTKLEAQSQTRESVLSTTEGRE 793
>gi|414564975|ref|YP_006043936.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338848040|gb|AEJ26252.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 837
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 192/634 (30%), Positives = 318/634 (50%), Gaps = 42/634 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
E SEE+ L++ +N L+ F+ + L+++ L+ L++Y+ + +
Sbjct: 169 ELSEEEQAILVKQMNLLLSFEMTALEDSPLIDHQLTAVELSAAGKLLHYVHQTQLRELSH 228
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ D Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+
Sbjct: 229 LQALVHYDIKDYLQMSYATKSSLDLL--ENARTGKKHGSLYWLLDETKTAMGMRLLRAWI 286
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L + +L+G+ D++ L+ R+ KA KD +
Sbjct: 287 DRPLVTSEAILERQEIIQVFLNAFIERTDLSD-SLKGVYDIERLSSRVSFGKANPKDLLQ 345
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------------- 372
+ ++++P + +ILE+ +N I L L+ L
Sbjct: 346 LGHTLAKVPYIKAILEAFNSPYLDKLVNQIDTLPELEHLIRSAIDPDAPATINEGNIIRT 405
Query: 373 ---KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID 426
+ +D VM + ++ E+ R+ + +++ I N G+ + +T +
Sbjct: 406 GFDERLDHYRKVMREGTGWIADIETKERQASGISNLKIDY-NKKDGYYFHVTNSNLGMVP 464
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L QL+
Sbjct: 465 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLA 524
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ YVRP + ++ RH +VE GV YIPN +
Sbjct: 525 KALATVDVLQSLAV--VAEKNHYVRPLFNQ--ESKIAIDNGRHAVVEKVLGVQEYIPNSI 580
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQIG FV +SA++ + D IFTR+GAA
Sbjct: 581 SF-GPQTSIQLITGPNMSGKSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAA 639
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ T +SL++ DELGRGT+T+DG +A SI +
Sbjct: 640 DDLISGQSTFMVEMMEANHAIKRATPHSLILFDELGRGTATYDGMALAQSIIEYIHDRVG 699
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + NV V+ LE++ N+ L+++ G KSYG+H A++AG
Sbjct: 700 SKTMFATHYHELTGLSTKLTRLVNVHVATLEKDGNVTFLHKIAEGPADKSYGIHVARIAG 759
Query: 726 YPEDMLEQARDLMKEYEYSLDTKTPSGDETNNRE 759
PED+L +A ++ + E T+ T RE
Sbjct: 760 LPEDLLARADAVLTKLEAQSQTRESVLSTTEGRE 793
>gi|254479232|ref|ZP_05092577.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
gi|214034833|gb|EEB75562.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
Length = 866
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 213/694 (30%), Positives = 352/694 (50%), Gaps = 72/694 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T + Y EI + + I + SP E + E+L +NK + + N
Sbjct: 137 GICAVDVTTGELYATEIKNCKDGKRIYDEIAKYSPSEIISNEEFLKNNK--YIKVFKNNN 194
Query: 150 VCMTGRK--KNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ K E S E + + ++ + ++ EL++ + + H L +L++YL+
Sbjct: 195 CAVNAYKPLNYEASSELIEKQFDK--KVEELELEDKKFV--------IHSLGALLSYLKE 244
Query: 208 MNNED--NMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+ ++N+ +++ D S Y+ + S + +L +L + S + SLLG+LDR TP
Sbjct: 245 LQKTSLKHINKLTLYQ-DNS-YMGLDSNAIRNLEILESNRNKSKKG--SLLGVLDRTVTP 300
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL +W+++PL D D I +R AV L NN R+ L E L + D++ LA +I
Sbjct: 301 MGGRLLKKWLEEPLIDKDEIEKRLDAVEELFNNYRERIELKEL-LNKVYDLERLASKIVY 359
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK----MMDR--KD 379
+ KD + + LPK+ +IL + L I L L+ ++D+ KD
Sbjct: 360 QSVTPKDFISIKLSLQNLPKIKNILSKFSSRL----LKEIYEKLDVLQDVYELIDKSIKD 415
Query: 380 AVMDKMKE-------YLE--------STARR---LNLVADKTIK--LENSPQG----FAY 415
+++KE Y E ST + NL A++ K ++N G F Y
Sbjct: 416 DPSNQLKEGNIIKDGYNEMVDKLRKASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGY 475
Query: 416 RITMKLNN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIV 468
I + +N + DRY T+ R+ L + + I+ EYE + +
Sbjct: 476 YIEVTKSNIPQVPDRYIRKQTLANAERYVTPELKEIEETILGAEEKLIELEYELFNE--I 533
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
E + + Q + +A DVL+SF A YV+P + +V+ + R
Sbjct: 534 REKVELQIVRIQNT---AKYIAIIDVLISF--AEVAETNKYVKPIVD--YEDRIVIKEGR 586
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
HP+VE ++ ND+ E ++TGPNM GKSTY+R + + V +AQ+GCFVP
Sbjct: 587 HPVVETISDEGFVANDIDI-GPENPIMIITGPNMAGKSTYMRQVALIVLMAQVGCFVPAS 645
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
A I +VD+IFTRVGA+D + G STFM+EM E A ++ T SL+I+DE+GRGTST+D
Sbjct: 646 YARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILHSATSKSLIILDEVGRGTSTYD 705
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
G +A ++ + + TLFATH+HE+ L + RN VS E+ED+++ L+++
Sbjct: 706 GMSIAQAVIEYIHEKIKAKTLFATHYHELTKLEGKLRGVRNFNVSVEEREDDIIFLHKIV 765
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
PG +SYG+ +K+AG P ++E+A+++++ E
Sbjct: 766 PGGSDRSYGIQVSKLAGLPYSIIERAKEILEALE 799
>gi|374724184|gb|EHR76264.1| DNA mismatch repair protein MutS [uncultured marine group II
euryarchaeote]
Length = 877
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 204/691 (29%), Positives = 343/691 (49%), Gaps = 70/691 (10%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLL-PAEYLNDNKNKIVTIL 145
+++G+ I+D T + + + DD +S +++ P E ++ P + + + T L
Sbjct: 128 SSIGIGIIDASTGQAWASNLDGDDRFSRALDEVLRWRPTEIVVAPKDADDATLRALFTHL 187
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
D V ++ K +E D + V ++ +L +A A +YL
Sbjct: 188 D--GVTISQHKASEAKRRDRLTKVLKVADLGHIDLDDA--------PLAIAAAGLAADYL 237
Query: 206 ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD-SLLGILDRCRT 264
M+ + + + ++ + ++ + + +L + ST A Y+ SLL ++ CR+
Sbjct: 238 ASMHLTEEVPLRDLEVMEENAHLVLDQTTLRNLELT----STLAGEYEGSLLSTMNACRS 293
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG 324
G RLL W+ +PL DL+AI RH AV L + + R++ ALRGL DM+ LA ++
Sbjct: 294 AMGRRLLKTWILRPLADLNAIAARHDAVATL-SRSARRLDGLREALRGLRDMERLATQLA 352
Query: 325 RKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRKDAVMD- 383
++ +D V + + ++P +I++ + +N +L++ L +LQ + R+ V +
Sbjct: 353 YNRSNGRDLLAVADALERMPAIINLCKE-TENPLLLHLSSNLDALQDVAENIRRTLVQEP 411
Query: 384 ----------------KMKEYLESTARRLNLVADKTIKLENSPQGFAYRITM-------- 419
K+ E E D KL+ Q + ++ M
Sbjct: 412 PLSVRDGGLLRPGFDSKVDELREIATNGHTWFTDLETKLKAELQIPSLKVKMNRQIGWFI 471
Query: 420 ---KLNNS-IDDRYTILDTVRGGVRF-------QDDRLATANTQYQAIQ-REYETHQQSI 467
K+N + + + + G R+ +DD L TA+T+ + ++ RE+ +++
Sbjct: 472 EVTKINEAKAPEHWKRKQQMTNGSRYVTDELLERDDALLTADTKLKELEYREFINLREAC 531
Query: 468 VEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQC 527
G+ QTL Q++ +A DVL F + + + RP M + +
Sbjct: 532 --------KGHAQTLAQIAGKVAAIDVLQCF--GTIARSRAWTRPEMAV--SDQMKAQGA 579
Query: 528 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
RHP++E Q G ++PND+ + + F L+TGPNMGGKSTY+R+ + LAQ G FVP
Sbjct: 580 RHPVLEQQSG--FVPNDLDL-TKKRKFLLITGPNMGGKSTYLRTTALMSILAQSGSFVPA 636
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
+ A I +VD+IFTRVGA+D RG STFMMEM E A ++++ T NSLV++DE+GRGTSTF
Sbjct: 637 EKAKIGLVDRIFTRVGASDDLRRGRSTFMMEMIEVAHILRRATSNSLVLLDEIGRGTSTF 696
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A S+ ++ Q TLFATH+H++ L + NV V E L ++ V
Sbjct: 697 DGLSIAWSVTEDICKRIQARTLFATHYHQLIGLEGEVDGLVNVHVQVAEANGELRFMHTV 756
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLM 738
G C SYGV A +AG P ++E+A DL+
Sbjct: 757 ADGPCDDSYGVQVAALAGLPRPVVERATDLL 787
>gi|221506587|gb|EEE32204.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG]
Length = 936
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 204/686 (29%), Positives = 331/686 (48%), Gaps = 102/686 (14%)
Query: 156 KKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
KKN L QD+ L+ +DS +KN + E+ L TA +L++ L++++ +
Sbjct: 125 KKNSADTASLHQDLATLLVAEDS-IKN-HISRELQLKTAAAACAALLSQARLLSDDMYIR 182
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLP-----------------QQGSTSAQTY------ 252
Q ++ + Y+ + +A ++L++ P G++ A +
Sbjct: 183 QCTLETYPLGNYLRIDNAAAAALYLFPSSLQQSQQQALLPLSAKSSGASRASSLACALSA 242
Query: 253 ----DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S+ ++ R C T G R L M QPL D I ER+ V + + R +
Sbjct: 243 GGGISSVYALMSRWCSTQLGARRLFTCMSQPLVDKKKIEERYDIVELFQTDEAFRRQVFC 302
Query: 308 YALRGLPDMQSLAMRIGR----------------KKAG--------LKDCYRVY------ 337
+ + D+ LA R R KK G L+D ++Y
Sbjct: 303 SHFKHVFDLDRLAGRFHRLASAAKDLDADAAPRGKKGGIFSRVKLTLEDLVKLYDCAVEC 362
Query: 338 ---------------------------EGVSQLPKLISILESLVQNVEASNLNTILSSL- 369
E V I+++E + EA + + ++S
Sbjct: 363 TSLETTLRGYAGIHRESLEKAFTEPLSEAVKSFSTFINLVEFTIDMEEAKHGSFVISRRF 422
Query: 370 --QSLKMMDRKDAVMDKMKEYLESTARRLNLVADK----TIKL-ENSPQGFAYRITMKLN 422
+ ++D+K+ + +M + + + K +KL E++ GF R+T K
Sbjct: 423 DSELASLLDKKEELRSRMNRERQKAEDDIPFASRKRDAEIVKLIEDNTMGFVLRVTKKDQ 482
Query: 423 NSI---DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+++ RY + + + F L +++ + Y Q S+VE+ + ++A Y
Sbjct: 483 SAVLSSRGRYHQVRLNKSELIFTTSELRGLCREFKDVAEAYAAMQNSLVEKALLVAASYW 542
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVS 539
+ +L+++L DVL +F+ A+ AP PYVRP + G LVL RHP++E+Q G S
Sbjct: 543 PAVEKLAELLGMLDVLGAFAAAANAAPVPYVRPQIVEGDAGGLVLKASRHPLLEIQPGTS 602
Query: 540 -YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
+I NDV+ E ++TGPNMGGKSTYIR + ++V LAQIG FVPC S + + Q+
Sbjct: 603 SFIANDVHLDR-ERRLAIITGPNMGGKSTYIRQVALTVLLAQIGSFVPCASCQLPIFTQV 661
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
RVGA+D Q RG+STF+ EM E A +++ + SLV+IDELGRGTST++GFG+A +IA+
Sbjct: 662 ICRVGASDIQLRGVSTFLAEMVEAAAILRNANKQSLVVIDELGRGTSTYEGFGLAWAIAK 721
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSY 716
LA+ + +LFATHFHE+ L +P N+ VSA + L LY+++ G +S+
Sbjct: 722 HLAAEAKCLSLFATHFHEMGQLCEEVPGVSNLHVSAAVNRETQQLAFLYRLQSGCVDQSF 781
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
GVH A AG P ++E+AR E E
Sbjct: 782 GVHVAGFAGLPATVVERARQKSAELE 807
>gi|225869421|ref|YP_002745369.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus]
gi|259511175|sp|C0MGC5.1|MUTS_STRS7 RecName: Full=DNA mismatch repair protein MutS
gi|225702697|emb|CAX00811.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus]
Length = 851
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 313/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
E SEE+ L++ +N L+ F+ + L+++ L+ L++Y+ + +
Sbjct: 178 ELSEEEQAILVKQMNLLLSFETTALEDSPLIDHQLTAVELSAAGKLLHYVHQTQLRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ D Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQTLVHYDIKDYLQMSYATKSSLDLL--ENARTGKKHGSLYWLLDETKTAMGMRLLRAWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L + +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVTSEAILERQEIIQVFLNAFIERTDLSD-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------------- 372
+ ++++P + ++LE+ +N I L L+ L
Sbjct: 355 LGHTLAKVPYIKAVLEAFNSPYLDKLVNQIDTLPELEHLIRSAIDPDAPATINEGNIIRT 414
Query: 373 ---KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID 426
+ +D VM + ++ E+ R+ + +++ I N G+ + +T +
Sbjct: 415 GFDERLDHYRKVMREGTGWIADIETKERQASGISNLKIDY-NKKDGYYFHVTNSNLGMVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L QL+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ YVRP + ++ RH +VE GV YIPN +
Sbjct: 534 KALATVDVLQSLAV--VAEKNHYVRPLFNQ--ESRIAIDNGRHAVVEKVLGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQIG FV +SA++ + D IFTR+GAA
Sbjct: 590 SF-GPQTSIQLITGPNMSGKSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ T +SL++ DELGRGT+T+DG +A SI +
Sbjct: 649 DDLISGQSTFMVEMMEANHAIKRATPHSLILFDELGRGTATYDGMALAQSIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + NV V+ LE++ N+ L+++ G KSYG+H A++AG
Sbjct: 709 AKTMFATHYHELTELSTKLTKLVNVHVATLEKDGNVTFLHKIAEGPADKSYGIHVARIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
PED+L +A ++ + E
Sbjct: 769 LPEDLLARADAVLTKLE 785
>gi|225871419|ref|YP_002747366.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
gi|254766638|sp|C0MAS5.1|MUTS_STRE4 RecName: Full=DNA mismatch repair protein MutS
gi|225700823|emb|CAW95529.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
Length = 851
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 188/617 (30%), Positives = 313/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
E SEE+ L++ +N L+ F+ + L+++ L+ L++Y+ + +
Sbjct: 178 ELSEEEQAILVKQLNLLLSFEMTALEDSPLIDHQLTAVELSAAGKLLHYVHQTQLRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ D Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYDIKDYLQMSYATKSSLDLL--ENARTGKKHGSLYWLLDETKTAMGMRLLRAWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L + +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVTSEAILERQEIIQVFLNAFIERTDLSD-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------------- 372
+ ++++P + +ILE+ +N I L L+ L
Sbjct: 355 LGHTLAKVPYIKAILEAFNSPYLDKLVNQIDTLPELEHLIRSAIDPDAPATINEGNIIRT 414
Query: 373 ---KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID 426
+ +D VM + ++ E+ R+ + +++ I N G+ + +T +
Sbjct: 415 GFDERLDHYRKVMREGTGWIADIETKERQASGISNLKIDY-NKKDGYYFHVTNSNLGMVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L QL+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ YVRP + ++ RH +VE GV YIPN +
Sbjct: 534 KALATVDVLQSLAV--VAEKNHYVRPLFNQ--ESKIAIDNGRHAVVEKVLGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQIG FV +SA++ + D IFTR+GAA
Sbjct: 590 SF-GPQTSIQLITGPNMSGKSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ T +SL++ DELGRGT+T+DG +A SI +
Sbjct: 649 DDLISGQSTFMVEMMEANHAIKRATPHSLILFDELGRGTATYDGMALAQSIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + NV V+ LE++ N+ L+++ G KSYG+H A++AG
Sbjct: 709 AKTMFATHYHELTELSTKLTKLVNVHVATLEKDGNVTFLHKIAEGPADKSYGIHVARIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
PED+L +A ++ + E
Sbjct: 769 LPEDLLARADTVLTKLE 785
>gi|365905365|ref|ZP_09443124.1| DNA mismatch repair protein MutS [Lactobacillus versmoldensis KCTC
3814]
Length = 875
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 301/579 (51%), Gaps = 44/579 (7%)
Query: 197 CLRSLINYL--ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS 254
L+ LI+YL M + D++ + + + S Y+ M S+L + + + + +
Sbjct: 221 TLKLLISYLIKTQMRSLDHLK--AAQTYETSAYLLMDHNAQSNLELF--KNIRTDKKSGT 276
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
LL +LD +T G RLL QW+ +PL + + +R V + ++N R + +Y L +
Sbjct: 277 LLWLLDETKTAMGGRLLKQWLARPLIKANKLRDRQHIVQVFLDNYFQRASFQDY-LTKVY 335
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKM 374
D++ LA R+ +D ++ + Q+P++ SIL + + +S + I +
Sbjct: 336 DLERLAGRVAYGTVNGRDLIQLKTSLEQVPQIKSILLDIGDDQLSSYVEKIDDVADVRDL 395
Query: 375 MDR----------------KDAVMDKMKEYLESTARRLNLVADKTIK------LENSPQG 412
+DR K+ D++ +Y +++ +A+ +K + N G
Sbjct: 396 IDRAIVDEPPISVTGGGVIKEGYNDQLDQYTDASKNGKQWMAELKVKEQEVTGINNLKIG 455
Query: 413 ----FAYRITMKLNNSIDD----RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
F Y I + N ID RY T+ R+ L + + + + +
Sbjct: 456 YNKVFGYYIEISRAN-IDKVPEGRYQRKQTLTNAERYITPELKEKESLILEAEDKSQALE 514
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ +E+ + L L+ +L++ DVL SF+I S YV P + L +
Sbjct: 515 YHLFDEIRAKVKKQIRRLQDLASILSELDVLQSFAIVSETYH--YVAPDF--VEGHQLKI 570
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP+VE + G SYIPNDV F S E L+TGPNM GKSTY+R + ++V +AQIGC
Sbjct: 571 VNGRHPVVEKVLGNNSYIPNDVTFDS-ETDVLLITGPNMSGKSTYMRQLALTVIMAQIGC 629
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP ++AT+ + D IFTR+GAAD G STFM+EM+E +K T+NSLVI DELGRG
Sbjct: 630 FVPAEAATLPIFDHIFTRIGAADDLISGDSTFMVEMREANDALKNATKNSLVIFDELGRG 689
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A +I + + T+F+TH+HE+ +L + +NV V A E++ NLV
Sbjct: 690 TATYDGMALAQAIIEYIDKNVHAMTMFSTHYHELTVLESQLTGVKNVHVDASEEDGNLVF 749
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L++V PG KSYG+H AK+AG P+ +L +A ++ + E
Sbjct: 750 LHKVLPGPADKSYGIHVAKLAGLPDQVLTRADSILSKLE 788
>gi|237831911|ref|XP_002365253.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
gi|211962917|gb|EEA98112.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
Length = 936
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 204/686 (29%), Positives = 330/686 (48%), Gaps = 102/686 (14%)
Query: 156 KKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
KKN L QD+ L+ +DS +KN + E+ L TA +L++ L++++ +
Sbjct: 125 KKNSADTASLHQDLATLLVAEDS-IKN-HISRELQLKTAAAACAALLSQARLLSDDMYIR 182
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLP-----------------QQGSTSAQTY------ 252
Q ++ + Y+ + +A ++L++ P G++ A +
Sbjct: 183 QCTLETYPLGNYLRIDNAAAAALYLFPSSLQQSQQQALLPLSAKSSGASRASSLACALSA 242
Query: 253 ----DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S+ ++ R C T G R L M QPL D I ER+ V + + R +
Sbjct: 243 GGGISSVYALMSRWCSTQLGARRLFTCMSQPLVDKKKIEERYDIVELFQTDEAFRRQVFC 302
Query: 308 YALRGLPDMQSLAMRIGR----------------KKAG--------LKDCYRVY------ 337
+ + D+ LA R R KK G L+D ++Y
Sbjct: 303 SHFKHVFDLDRLAGRFHRLASAAKDLDADAAPRGKKGGIFSRVKLTLEDLVKLYDCAVEC 362
Query: 338 ---------------------------EGVSQLPKLISILESLVQNVEASNLNTILSSL- 369
E V I+++E + EA + + ++S
Sbjct: 363 TSLETTLRGYAGIHRESLEKAFTEPLSEAVKSFSTFINLVEFTIDMEEAKHGSFVISRRF 422
Query: 370 --QSLKMMDRKDAVMDKMKEYLESTARRLNLVADK----TIKL-ENSPQGFAYRITMKLN 422
+ ++D+K+ + +M + + + K +KL E++ GF R+T K
Sbjct: 423 DSELASLLDKKEELRSRMNRERQKAEDDIPFASRKRDTEIVKLIEDNTMGFVLRVTKKDQ 482
Query: 423 NSI---DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+++ RY + + + F L +++ + Y Q S+VE+ + ++A Y
Sbjct: 483 SAVLSSRGRYHQVRLNKSELIFTTSELRGLCREFKDVAEAYAAMQNSLVEKALLVAASYW 542
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVS 539
+ +L+++L DVL +F+ A+ AP PYVRP + G LVL RHP++E+Q G S
Sbjct: 543 PAVEKLAELLGMLDVLGAFAAAANAAPMPYVRPQIVEGDAGGLVLKASRHPLLEIQPGTS 602
Query: 540 -YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
+I NDV+ E ++TGPNMGGKSTYIR + ++V LAQIG FVPC S + + Q+
Sbjct: 603 SFIANDVHLDR-ERRLAIITGPNMGGKSTYIRQVALTVLLAQIGSFVPCASCQLPIFTQV 661
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
RVGA+D Q RG+STF+ EM E A +++ SLV+IDELGRGTST++GFG+A +IA+
Sbjct: 662 ICRVGASDIQLRGVSTFLAEMVEAAAILRNANTQSLVVIDELGRGTSTYEGFGLAWAIAK 721
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKSY 716
LA+ + +LFATHFHE+ L +P N+ VSA + L LY+++ G +S+
Sbjct: 722 HLAAEAKCLSLFATHFHEMGQLCEEVPGVSNLHVSAAVNRETQQLAFLYRLQSGCVDQSF 781
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
GVH A AG P ++E+AR E E
Sbjct: 782 GVHVAGFAGLPATVVERARQKSAELE 807
>gi|76786970|ref|YP_330630.1| DNA mismatch repair protein MutS [Streptococcus agalactiae A909]
gi|77405088|ref|ZP_00782187.1| DNA mismatch repair protein MutS [Streptococcus agalactiae H36B]
gi|77410851|ref|ZP_00787208.1| DNA mismatch repair protein MutS [Streptococcus agalactiae CJB111]
gi|406710411|ref|YP_006765137.1| DNA mismatch repair protein MutS [Streptococcus agalactiae
GD201008-001]
gi|424048526|ref|ZP_17786077.1| DNA mismatch repair protein MutS [Streptococcus agalactiae ZQ0910]
gi|109923766|sp|Q3JYM3.1|MUTS_STRA1 RecName: Full=DNA mismatch repair protein MutS
gi|76562027|gb|ABA44611.1| DNA mismatch repair protein HexA [Streptococcus agalactiae A909]
gi|77163069|gb|EAO74023.1| DNA mismatch repair protein MutS [Streptococcus agalactiae CJB111]
gi|77176231|gb|EAO79001.1| DNA mismatch repair protein MutS [Streptococcus agalactiae H36B]
gi|389649991|gb|EIM71462.1| DNA mismatch repair protein MutS [Streptococcus agalactiae ZQ0910]
gi|406651296|gb|AFS46697.1| DNA mismatch repair protein MutS [Streptococcus agalactiae
GD201008-001]
Length = 858
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 202/723 (27%), Positives = 354/723 (48%), Gaps = 73/723 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREIVVGYQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIVVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEVLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAEN--HHYVRP--KFNDEHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM GKSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + T+FATH+HE+ LS + NV V+ LE++ + L++++ G KS
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTKTPSGDETNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E L P T + EE Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDILSQLEADAVQLIVSAPQEAVTADLNEELDSEKQQGQLS 819
Query: 773 MFD 775
+F+
Sbjct: 820 LFE 822
>gi|320547650|ref|ZP_08041935.1| DNA mismatch repair protein HexA [Streptococcus equinus ATCC 9812]
gi|320447725|gb|EFW88483.1| DNA mismatch repair protein HexA [Streptococcus equinus ATCC 9812]
Length = 856
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 187/688 (27%), Positives = 337/688 (48%), Gaps = 72/688 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +FY + D +++L++ I+ +E ++
Sbjct: 137 TFGLAYMDVSTGEFYATSLSD---FASLKSEILNLKAREIVV------------------ 175
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
G + +E + L++ +N L+ F+ ++ L+ + L+ Y+
Sbjct: 176 ------GYELSEEEKHSLVKQLNLLLSFEQERFEDVHLIDSNLASLEISAAEKLLQYVHT 229
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS SSL +L + + +++ + SL +LD +T G
Sbjct: 230 TQKRELSHLQKLVHYEIKDYLQMSYTTKSSLDLL--ENARTSKKHGSLYWLLDETKTAMG 287
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL W+ +PL + + I ER + + ++N R +L + +L+G+ D++ LA R+ K
Sbjct: 288 MRLLRNWIDRPLVNREQIEERQNIIQVFLDNFFERSDLTD-SLKGVYDIERLASRVSFGK 346
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRK--------- 378
A KD ++ + Q+P + +ILES E+ L+ +++S+ +L ++
Sbjct: 347 ANPKDLLQLGHTLGQVPTIKAILESF----ESPYLDKLVNSIDTLPELESLISSAIAPDA 402
Query: 379 --------------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAY 415
D +DK ++ + + + K +K++ N G+ +
Sbjct: 403 QAVITEGSIIRTGFDETLDKYRKVMREGTSWIAEIEAKERAASGITNLKIDYNKKDGYYF 462
Query: 416 RITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
+T + + D + T++ RF LA + + + + + I + V
Sbjct: 463 HVTNSNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFKRVRAQV 522
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-L 534
Y L L+ ++ DVL S ++ + YVRP + + + + RH +VE +
Sbjct: 523 ERYISRLQDLAKAISTVDVLQSLAVVAEN--NHYVRPTFN--DSHEIKIEKGRHAVVEKV 578
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G YIPN + F + L+TGPNM GKSTY+R + ++V +AQ+G +V +S ++ V
Sbjct: 579 MGTQEYIPNTITFGRN-TNIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVSLPV 637
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
D IFTR+GAAD G STFM+EM E IK+ ++ SL++ DELGRGT+T+DG +A
Sbjct: 638 FDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDQSLILFDELGRGTATYDGMALAQ 697
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
SI + H T+FATH+HE+ LS + NV V+ LE+ ++ L+++ G K
Sbjct: 698 SIIEYIHDHIGAKTMFATHYHELTALSTTLTHLVNVHVATLERNGDVTFLHKIAEGPADK 757
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+H AK+AG PED+L++A ++ E
Sbjct: 758 SYGIHVAKIAGLPEDLLQRADSILTNLE 785
>gi|307105803|gb|EFN54051.1| hypothetical protein CHLNCDRAFT_36258 [Chlorella variabilis]
Length = 358
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/295 (45%), Positives = 191/295 (64%), Gaps = 2/295 (0%)
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
++F + L A + Q + +YE Q ++ +V+G++A + +S LA+ D+L +F
Sbjct: 1 MKFVNKALKAAAQRLQQLSADYERRQAELLAQVVGVAASFVGVWRLVSATLAELDLLAAF 60
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVT 558
+ AP YVRP M P G + L CRHP +E+Q GV +IPND ++G+ F+++T
Sbjct: 61 GEVAAAAPASYVRPTMLPSEEGEISLRGCRHPCLEVQEGVDFIPNDCLMRTGQSWFHIIT 120
Query: 559 GPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMME 618
GPNMGGKST+IR +G++V +AQIG FVP DSA ISV D IF RVGA D Q RG+STFM E
Sbjct: 121 GPNMGGKSTFIRQVGLAVLMAQIGSFVPADSARISVRDAIFARVGAGDCQQRGLSTFMAE 180
Query: 619 MKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIA 678
M ETA ++K T +SLVIIDELGRGTST++G G+A +I+ L + TLFATHFH++A
Sbjct: 181 MLETAAILKGATSSSLVIIDELGRGTSTWEGMGLAWAISEHLCTQVGCATLFATHFHDLA 240
Query: 679 LLSRVIP--TFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDML 731
L +P N+ V A E + L +LYQV G+ +SYG+ A+ A P +++
Sbjct: 241 ALQSALPGAGVANLHVKAAESDSGLTMLYQVHEGASAQSYGLAVARFARLPPEVI 295
>gi|300175778|emb|CBK21321.2| unnamed protein product [Blastocystis hominis]
Length = 591
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 312/583 (53%), Gaps = 81/583 (13%)
Query: 228 VHMSSAVMSSLHVLPQQGSTSAQTY--------DSLLGILDRCRTP-QGHRLLAQWMKQP 278
+ + S+ +S+L++ P + + + SL G+L+ T G RLL +W+ QP
Sbjct: 1 MRLDSSALSTLNIFPVDKTRDSTSRFPRCFAFTRSLFGLLNHTLTAGMGERLLRRWLCQP 60
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK-KAGLKDCYRVY 337
L +D I R V + +++ R L L+GL D++ LA R+ R+ + L+D Y +
Sbjct: 61 LISIDRINTRLDLVELFLHDVSLRNELRTGCLKGLVDIEKLAQRLERRVRFRLQDLYVLS 120
Query: 338 EGVSQLPKLISILES-------LVQNVEASNLNTILSSLQSLK-----MMDRKDAVMDKM 385
+GVS+L ++++ +E+ +Q+V + ++ S + + ++D DA+
Sbjct: 121 QGVSKLNRILNTMENSEHASNPTLQSVFIDPIRDLIQSFEPFRELCDHVID-PDALAMTP 179
Query: 386 KEYL---------ESTARRLN-LVADKT--------------IKLE-NSPQGFAYRITMK 420
E+L ES A+R N L A+ T +K E N+ GF +R++ +
Sbjct: 180 PEFLVRPTYDATLESVAQRKNQLFAEITAVFDSVREQYSTMDVKCERNARFGFCFRVSSR 239
Query: 421 LNNSIDD--RYTILDTVRGGVRFQDDR-------------LATANTQYQAIQREYETHQQ 465
+N ++ ++L ++ G+ F D ++ ++ + EY Q+
Sbjct: 240 FHNEVESIPDVSVLQVLKNGIYFTLDGSTFPLGRFVMYSDFRGLSSDFEECRAEYAKAQE 299
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP--------- 516
+V +I ++ Y + + + AQ DVL+SF+ AS+ A PY RP P
Sbjct: 300 RLVASIIDVARTYVPRFHVFASLAAQLDVLLSFAEASSIASIPYTRPQFLPSTPIVGFGI 359
Query: 517 MGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKS-GEVSFN--LVTGPNMGGKSTYIRSIG 573
G + + + RH I+E+Q G+ +IPND+ + N ++TGPNMGGKSTY+R +G
Sbjct: 360 AGPIDIRIEEGRHAILEVQTGLQFIPNDLDLTPRNNIPQNVCIITGPNMGGKSTYMRQLG 419
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN- 632
+ V +AQIGCFVP +A ++TRVGA+D+Q RG+STFM EM + + ++ C+E+
Sbjct: 420 LIVMMAQIGCFVPAKTAVFPAFSALYTRVGASDNQSRGVSTFMSEMIDMSNILSGCSEDK 479
Query: 633 --SLVIIDELGRGTSTFDGFGMACSIARELASHRQP--FTLFATHFHEIALLSRVIPTFR 688
SL++IDELGRGTST+DG G++ I E + P F LF THF+E+ +++ P +
Sbjct: 480 GKSLILIDELGRGTSTYDGLGLSWGIL-EFILRKIPNCFCLFTTHFYELTAIAKQFPAVK 538
Query: 689 NVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDML 731
NV V+AL E+ + ++Y V+ G KS+G++ A++ +P++++
Sbjct: 539 NVHVTALNGENYITMMYGVREGPSDKSFGINVAQLCNFPKEVI 581
>gi|339640062|ref|ZP_08661506.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 056
str. F0418]
gi|339453331|gb|EGP65946.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 056
str. F0418]
Length = 841
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 188/660 (28%), Positives = 327/660 (49%), Gaps = 82/660 (12%)
Query: 140 KIVTILDRNKVC-----------MTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE 188
++ T+ D ++ C + G E E+ L +N L+ + L++ +LL +
Sbjct: 151 QVTTLADFDQACGEIRNLQAREVVVGYALPESEEKVLSNQMNLLLSRVEDVLEDVQLLGD 210
Query: 189 MCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS 248
L++Y+ + + +H + ++ M A +SL ++ + + +
Sbjct: 211 ELSPLEKRVAGKLLHYVFQTQMRELSHLKKVHHYEIKDFLQMDYATKTSLDLI--ENART 268
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
+ + SL ++D +T G RLL W++ PL D D I +R V + +++ R +L +
Sbjct: 269 GKKHGSLFWLMDEAKTAMGGRLLRSWIQHPLIDKDRITKRQDVVQVFLDSFFERSDLSD- 327
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSS 368
+LRG+ D++ LA R+ K KD ++ +S +P++ +ILE N+ + L T++S
Sbjct: 328 SLRGVYDIERLASRVSFGKTNPKDLLQLASTLSHVPQIRAILE----NIASPALETLVSK 383
Query: 369 LQSLKMMDRK-----------------------DAVMDK----MKEY------LESTARR 395
L ++ ++ D +DK M+E +E+ R
Sbjct: 384 LDAIPELENLISSAISPDASQVITEGNIIQSGFDETLDKYRLVMREGTSWIADIEAKERA 443
Query: 396 LNLVADKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLA-------- 447
+ +++ I N G+ + +T + + T++ R+ + LA
Sbjct: 444 TSGISNLKIDY-NKKDGYYFHVTNSQLGHVPSHFFRKATLKNSERYGTEELARIEGEMLE 502
Query: 448 ----TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST 503
+AN +Y+ R I EE + Y + L L+ LA DVL SF++ +
Sbjct: 503 AREKSANLEYEIFMR--------IREE----AGKYIKRLQALAQTLATIDVLQSFAVVAE 550
Query: 504 CAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNM 562
+ VRP +L + + RH +VE + G SYIPN V + + L+TGPNM
Sbjct: 551 N--QHLVRPSFT--ANRTLKIEKGRHAVVEKVMGAQSYIPNSVVMDA-DTDIQLITGPNM 605
Query: 563 GGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKET 622
GKSTY+R + + V +AQ+G +VP + A + + D IFTR+GAAD G STFM+EM E
Sbjct: 606 SGKSTYMRQLAIIVIMAQMGSYVPAELAVLPIFDAIFTRIGAADDLVSGQSTFMVEMMEA 665
Query: 623 ATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR 682
I++ +E+SL++ DELGRGT+T+DG +A +I + + TLFATH+HE+ LS
Sbjct: 666 NRAIRQASEHSLILFDELGRGTATYDGMALAQAIIEYIHDRTKAKTLFATHYHELTELST 725
Query: 683 VIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+P N+ V+ LE++ + L++++ G KSYG+H AK+AG P D+LE+A ++ E
Sbjct: 726 SLPRLENLHVATLEKDGQVTFLHKIEEGPADKSYGIHVAKIAGLPVDLLERADSILTHLE 785
>gi|357237900|ref|ZP_09125239.1| DNA mismatch repair protein MutS [Streptococcus ictaluri 707-05]
gi|356753404|gb|EHI70519.1| DNA mismatch repair protein MutS [Streptococcus ictaluri 707-05]
Length = 850
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 189/673 (28%), Positives = 337/673 (50%), Gaps = 44/673 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
E S+E+ L++ +N L+ F+D+ ++ RL+ L+NY+ + +
Sbjct: 178 ELSDEEQTVLVKQMNLLLSFEDTLYEDERLIKADFSPIERSVAAKLLNYVHTTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
+ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQELVHYEIKDYLQMSYATKSSLDLV--ENARTGKKHGSLYWLLDETKTAMGMRLLKTWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL + +AI+ER + + ++ R +L + +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVNKEAILERQNIIQVFLDAFIERTDLSD-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSLKMMDRKDAVM---------- 382
+ + Q+P + +ILES + + ++TI Q ++ DA
Sbjct: 355 LGHTLGQVPLIKAILESFNSPYLDKLVNQVDTIPELEQLIRSAIDPDAPATINEGNIIRT 414
Query: 383 ---DKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSIDD 427
+++ Y + +AD +K++ N G+ + +T + + D
Sbjct: 415 GFDERLDHYRKVMREGTGWIADIEAKERQNSGINNLKIDYNKKDGYYFHVTNSNLSMVPD 474
Query: 428 RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSD 487
+ T++ R+ LA Q + E + + I + Y L L+
Sbjct: 475 YFFRKATLKNSERYGTTELAKIEGQMLEAREESSSLEYDIFMRIRAKVETYIDRLQALAK 534
Query: 488 VLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVY 546
LA DVL S S Y+RP + + + RH +VE + G YI ND+
Sbjct: 535 ALATIDVLQSLSF--VAEKNHYIRPQFNQ--KHQINIQEGRHAVVEKVMGAQEYISNDII 590
Query: 547 FKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAAD 606
F G+ S L+TGPNM GKSTY+R + ++V +AQ+G FV S + + D IFTR+GAAD
Sbjct: 591 F-DGQTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAAQSVDLPLFDAIFTRIGAAD 649
Query: 607 SQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQP 666
G STFM+EM E IK+ +++SL++ DELGRGT+T+DG +A SI +
Sbjct: 650 DLISGQSTFMVEMMEANHAIKRASQDSLILFDELGRGTATYDGMALAQSIIEHIHDQVGA 709
Query: 667 FTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGY 726
T+FATH+HE+ LS ++ + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 710 KTMFATHYHELTGLSTILTSLVNVHVAILEKDGDVTFLHKIAQGPADKSYGIHVAKIAGL 769
Query: 727 PEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQ 786
P +L++A +++E L++K P ++ +++ T + + +FD + ++ ++
Sbjct: 770 PNSLLKRADTVLQE----LESKQPLAMTSHTDKDDSSATNSKAQLSLFDTEDKVTAIIQE 825
Query: 787 KDTNRILHLQETQ 799
+ I++L Q
Sbjct: 826 LEALDIMNLTPMQ 838
>gi|410595361|ref|YP_006952088.1| DNA mismatch repair protein mutS [Streptococcus agalactiae SA20-06]
gi|410519000|gb|AFV73144.1| DNA mismatch repair protein mutS [Streptococcus agalactiae SA20-06]
Length = 857
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 206/747 (27%), Positives = 366/747 (48%), Gaps = 74/747 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREMVVGCQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIIVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAENYH--YVRP--KFNDEHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM GKSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + + T+FATH+HE+ LS + NV V+ LE++ + L++++ G KS
Sbjct: 700 IIEYIHNRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTKTPSGDETNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E L P T + EE + Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDILSQLEADAVQLIVSAPQEAVTADLNEEDSEK-QQGQLS 818
Query: 773 MFDFLQQCLSLSKQKDTNRILHLQETQ 799
+F+ L + ++ + I++L Q
Sbjct: 819 LFEELSNADRVIEELEAIDIMNLTPMQ 845
>gi|152979852|ref|YP_001352979.1| DNA mismatch repair protein MutS [Janthinobacterium sp. Marseille]
gi|189083179|sp|A6SXI2.1|MUTS_JANMA RecName: Full=DNA mismatch repair protein MutS
gi|151279929|gb|ABR88339.1| DNA mismatch repair protein [Janthinobacterium sp. Marseille]
Length = 882
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 272/536 (50%), Gaps = 48/536 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L +LD CRT G RLL W+ +D + RHAA+N L+ +A L L +
Sbjct: 306 TLFSLLDHCRTAMGSRLLRHWLHHARRDQSVAMARHAAINALMR-ADACSGLAS-TLASV 363
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS-- 371
PD++ + RI A +D + G+ QLP L + + ++ +A L TI +L +
Sbjct: 364 PDVERITTRIALLSARPRDLAGMRGGLQQLPSLRAYVSMCNKDADAPLLKTIHDALATPS 423
Query: 372 --LKMMDRK-------------------DAVMDKMKEYLESTA--------RRLNLVADK 402
L +++R DA +D+++ E+ R
Sbjct: 424 DCLDLVERAIAMEPAAMVRDGGVIARGFDAELDELRGLSENAGQFLIDLETRERARTGIN 483
Query: 403 TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+++E N GF +T + + D Y T++ R+ L + + Q
Sbjct: 484 NLRVEYNKVHGFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERAL 543
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS----TCAPKPYVRPCMKPM 517
++ + E+V+ + TL ++ LAQ D LV+ + + CAP+ P
Sbjct: 544 AREKYLYEQVLQQMTQHIATLQNIAHALAQLDTLVALAEHALRHNWCAPQLVSEP----- 598
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
++ + Q RHP+VE +I ND S E L+TGPNMGGKSTY+R + +
Sbjct: 599 ---TITIEQGRHPVVE-NHIERFIANDCLLSS-ECKLLLITGPNMGGKSTYMRQVALITL 653
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA +G FVP SA I +D+IFTR+GAAD G STFM+EM E+A ++ TENSLV++
Sbjct: 654 LAYVGSFVPASSAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLM 713
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTSTFDG +A +IA+ L + + FTLFATH+ E+ L + PT NV +SA+E
Sbjct: 714 DEVGRGTSTFDGLALAWAIAKHLIDNTKSFTLFATHYFELTQLPEIHPTAANVHLSAVEH 773
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+D++V L+ V+ G +SYG+ A++AG P+ ++ AR + E + TP D
Sbjct: 774 KDSIVFLHAVQAGPASQSYGLQVAQLAGVPQPVIRAARKHLALLEANSMQATPQFD 829
>gi|418976809|ref|ZP_13524657.1| DNA mismatch repair protein MutS [Streptococcus mitis SK575]
gi|383350889|gb|EID28735.1| DNA mismatch repair protein MutS [Streptococcus mitis SK575]
Length = 844
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 194/647 (29%), Positives = 325/647 (50%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLATVEQEASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +DK + L E T + A + T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDNSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P D+L +A ++ + E S T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-SQGTESPA 793
>gi|379706199|ref|YP_005204658.1| DNA Mismatch repair ATPase (MutS family) [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374682898|gb|AEZ63187.1| DNA Mismatch repair ATPase (MutS family) [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 855
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 191/682 (28%), Positives = 332/682 (48%), Gaps = 64/682 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +D+ T +FY + D +++L++ I+ +E ++
Sbjct: 139 GLAYMDVSTGEFYATSLSD---FTSLKSEILNLKAREIVV-------------------- 175
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
G +E + L++ +N L+ F+ ++ L+ L+ Y+
Sbjct: 176 ----GYDLSEDEQHSLVKQLNLLLSFEQERYEDVHLIDLNLTALEISAAEKLLQYVHTTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ MS SSL +L + + +++ + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMSYTTKSSLDLL--ENARTSKKHGSLYWLLDETKTAMGMR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL + + I ER V + ++N R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRNWIDRPLVNQEQIEERQNIVQVFLDNFFERSDLTD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + Q+P + +ILES +N+I L L+SL
Sbjct: 349 PKDLLQLGHTLGQVPTIKAILESFDSPYLDKLVNSIDTLPELESLISSAIDPDAQAVITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE-NSPQGFAYRITMKL 421
+ +D+ VM + ++ E A+ +K++ N G+ + +T
Sbjct: 409 GSIIRTGFDETLDKYRKVMREGTSWIAEIEAKERAASGITNLKIDYNKKDGYYFHVTNSN 468
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ + D + T++ RF LA + + + + + I V Y
Sbjct: 469 LSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFMRVRAQVERYISR 528
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSY 540
L L+ ++ DVL S ++ + YVRP + + + + RH +VE + G Y
Sbjct: 529 LQDLAKAISTVDVLQSLAVVAEN--NHYVRPSFN--DSHEIKIEKGRHAVVEKVMGTQEY 584
Query: 541 IPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFT 600
IPN + F + L+TGPNM GKSTY+R + ++V +AQ+G +V +S ++ V D IFT
Sbjct: 585 IPNTITFGRN-TNIQLITGPNMSGKSTYMRQLALTVIMAQVGSYVAAESVSLPVFDAIFT 643
Query: 601 RVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAREL 660
R+GAAD G STFM+EM E IK+ +E SL++ DELGRGT+T+DG +A SI +
Sbjct: 644 RIGAADDLISGQSTFMVEMMEANQAIKRASEKSLILFDELGRGTATYDGMALAQSIIEYI 703
Query: 661 ASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHC 720
H + T+FATH+HE+ LS + NV V+ LE+ ++ L+++ G KSYG+H
Sbjct: 704 HDHIRAKTMFATHYHELTSLSTALTHLVNVHVATLERNGDVTFLHKIAEGPADKSYGIHV 763
Query: 721 AKMAGYPEDMLEQARDLMKEYE 742
AK+AG PED+L++A ++ E
Sbjct: 764 AKIAGLPEDLLQRANSILTNLE 785
>gi|322377998|ref|ZP_08052485.1| DNA mismatch repair protein MutS [Streptococcus sp. M334]
gi|321280980|gb|EFX57993.1| DNA mismatch repair protein MutS [Streptococcus sp. M334]
Length = 844
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 194/647 (29%), Positives = 324/647 (50%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYGLSEEEEQILSRQMNLVLSYEKESFEDLHLLDSRLATVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLVTTLSSVPRIRAILEGMEQPALAYLIEQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +DK + L E T + A + T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGEDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P D+L +A ++ + E S T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-SQGTESPA 793
>gi|450064170|ref|ZP_21845291.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML5]
gi|449203955|gb|EMC04786.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML5]
Length = 849
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 336/684 (49%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS ++ + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTILTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|297588419|ref|ZP_06947062.1| DNA mismatch repair protein MutS [Finegoldia magna ATCC 53516]
gi|297573792|gb|EFH92513.1| DNA mismatch repair protein MutS [Finegoldia magna ATCC 53516]
Length = 859
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 216/790 (27%), Positives = 383/790 (48%), Gaps = 102/790 (12%)
Query: 26 CVHGEDAELIQRKSNVVYLVKTMGQKDKTLETVLVNK-SNLSCFSHILCVISEDKTLETV 84
C ED +L++ LVK K T TV+ N+ S+ F++++ + +
Sbjct: 86 CEQLEDPKLVKG------LVKRGIIKIYTPATVIENENSDTGNFNYLMSISKK------- 132
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK---NKI 141
+N V ++ +D+ T DD Y +E I + +PKE + ND++ +
Sbjct: 133 -SNEVAISYIDISTGDVSYTNSTSDDIYKIIENEISKITPKEVIF-----NDHEFSAKSL 186
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
TI + + +T + + + +N + +D+S + T C+ +L
Sbjct: 187 ETIATKFSIVLTTIN----NSTNALDFINSKIEYDNSNSE-----------TTNICVANL 231
Query: 202 INYL-ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILD 260
+ Y+ + ++N S + I+ +++ + S + +L + Q+ + SL G+L+
Sbjct: 232 LKYVFRYQGDLVHINSSSKYYIN--EFMEIDSNSVINLEI--QKNLYTNSKNGSLFGVLN 287
Query: 261 RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLA 320
+T G RLL ++++PL D + I+ R + V + + E +NL + +L G+ D+ L
Sbjct: 288 HTKTSMGSRLLHSYLERPLMDKEEILTRQSRVEEIFEDYELLVNLED-SLDGIYDLDRLI 346
Query: 321 MRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVE---------------------- 358
++ K A KD + + ++P L ++L +N++
Sbjct: 347 AKLSYKSANAKDLIALKVSIEKIPYLKTLLNCNKKNIQLIGEKLDDLGDIYDLIDKSIVD 406
Query: 359 ------------ASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKL 406
SN + L L+ ++ + + V +M E + L +V +K +
Sbjct: 407 DPPVTLTEGNLIKSNFSNELDQLRYNRVNGKNELVEYEMSEKDRLGIKNLKIVFNKKL-- 464
Query: 407 ENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
G+ +T N + D Y T+ RF+ +L ++ + E +
Sbjct: 465 -----GYFIDVTKSNLNKVGDDYEKRQTLTNSSRFKTKQLEAIESKILDSEDEIFELEYK 519
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I E++ I + + +D++A DV S S+A Y++P + G ++ +
Sbjct: 520 IFEDIRKIILKNLSRIKKSADLIAIIDV--SNSLAKCAYLNNYIKPDINTYGLIDVL--E 575
Query: 527 CRHPIVELQGGVS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RHPIVEL G S +I ND+ SG+ L+TGPNM GKSTY+R + + L QIG FV
Sbjct: 576 SRHPIVELSVGQSEFITNDILIGSGKNDIQLITGPNMSGKSTYLRQVALICILNQIGSFV 635
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P A IS+VD+IFTR+G++D+ ++G STFM+EMKE + +IK T NSL+++DE+GRGTS
Sbjct: 636 PATKANISIVDKIFTRIGSSDNLFKGESTFMVEMKEMSNIIKYATSNSLLVLDEIGRGTS 695
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
TFDG +A +I ++ + + TLFATH+HE+ L + + N++V E D+++ L
Sbjct: 696 TFDGLSLAWAIVEYISKNIKAKTLFATHYHELTELEKKLDNLINMKVDIKETNDSIIFLR 755
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK-----------TPSGDE 754
++ GS KSYG+ A++AG P+ ++++A+ ++KE + DTK DE
Sbjct: 756 KITRGSTDKSYGIEVAELAGMPKSLIKRAKSILKEIDKE-DTKIDLPIADFAVPNDENDE 814
Query: 755 TNNREEEYFK 764
N E E FK
Sbjct: 815 NNISELENFK 824
>gi|418974046|ref|ZP_13521981.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383346023|gb|EID24099.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
ATCC BAA-960]
Length = 844
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 318/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKENFEDLHLLDSRLATVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + + + R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLGHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q V A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPVLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPVHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAIMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|377809458|ref|YP_005004679.1| DNA mismatch repair protein MutS [Pediococcus claussenii ATCC
BAA-344]
gi|361056199|gb|AEV95003.1| DNA mismatch repair protein MutS [Pediococcus claussenii ATCC
BAA-344]
Length = 870
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 289/531 (54%), Gaps = 48/531 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G RLL QW+ +PL AI+ER V ILVN+ R +L + ++ +
Sbjct: 280 TLLWLLDATKTAMGGRLLKQWLDRPLIQKKAIIERQNQVEILVNHFFERSSLQDELVK-V 338
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQN-----------VE--AS 360
D++ LA R+ +D ++ + Q+PK+ +LE L + VE A
Sbjct: 339 YDLERLAGRVAFGNVNGRDLIQLKTSLLQVPKIQHVLEELAEPAFDAMLEHLDPVEDIAD 398
Query: 361 NLNTILSSLQSLKMMDR---KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
+N +S + + D KD + +Y ++ + +AD K +K+
Sbjct: 399 LINNSISEDAPISVTDGNLIKDGYNKTLDQYRDAMSNGRKWIADMQATERERTGIKNLKI 458
Query: 407 E-NSPQGFAYRITM-KLNNSIDDRYTILDTVRGGVRF------QDDRLATANTQYQAIQR 458
N G+ IT L++ + RY T+ RF + +R+ Q ++
Sbjct: 459 GFNKVFGYYIEITRSNLDSVPEGRYERKQTLTNAERFITPELKEKERIILEAEQ-KSTDL 517
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ S + E I S L +L+ V+++ DVL SF++ S +V+P +
Sbjct: 518 EYDLF--SAIREEIKKS---IDRLQELAKVISRLDVLQSFAVISEQYD--FVKPTI--TD 568
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G SY+PND+ + L+TGPNM GKSTY+R + ++V
Sbjct: 569 QHDIYIKNGRHPVVEKVMGHQSYVPNDINM-GKDTEILLITGPNMSGKSTYMRQLALTVI 627
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQ+GCFV +SATI + DQIFTR+GAAD G STFM+EM+E ++ T+NSLV+
Sbjct: 628 MAQMGCFVAAESATIPIFDQIFTRIGAADDLISGQSTFMVEMQEANRALQNGTQNSLVLF 687
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGT+T+DG +A SI + + TLF+TH+HE+ L + + +NV V A+EQ
Sbjct: 688 DEIGRGTATYDGMALAQSIIEYIHQNVHAKTLFSTHYHELTDLDQTLDRLKNVHVGAVEQ 747
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK 748
NLV L++++ G KSYG+H AK+AG P ++L++A ++++ E + DT+
Sbjct: 748 NGNLVFLHKMEDGPADKSYGIHVAKLAGMPNNLLKRANVILQDLESTNDTE 798
>gi|365903634|ref|ZP_09441457.1| DNA mismatch repair protein MutS [Lactobacillus malefermentans KCTC
3548]
Length = 880
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 284/552 (51%), Gaps = 45/552 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G RLL +W+ +PL AI +R V +L+ R NL + L +
Sbjct: 283 TLLWLLDETKTAMGARLLKRWLDRPLLSKAAIEDRQNKVKVLLEYYFERSNLQD-ELVSV 341
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK 373
D++ LA R+ +D ++ + Q+PK+ +L++L E + IL SL ++
Sbjct: 342 YDLERLAGRVAFGNVNGRDLIQLKTSLQQVPKIKHVLDTL----ETPEFDEILKSLDPVE 397
Query: 374 ---------MMDR-----------KDAVMDKMKEY-------------LESTARRLNLVA 400
++D KD D++ +Y L+++ R++ +
Sbjct: 398 DVAVAIESAIVDEPPMSVTDGNLIKDNYNDQLDQYRDAMQNGKQWIAELQASERKITGIN 457
Query: 401 DKTIKLENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQRE 459
+ + N G+ +T + L+ + RY T+ RF L Q +
Sbjct: 458 NLKVAY-NRVFGYYIEVTKVNLSKLPEGRYERKQTLTNAERFSTPELKEREQLILEAQEK 516
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
+ ++ ++ Q L +L+ V++ DVL SF++ S V+P M
Sbjct: 517 SAALEYTLFTDLREKVKLAIQRLQKLAQVISTLDVLQSFAVVSENYR--LVQPQMT-QNA 573
Query: 520 GSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
L + Q RHP+VE + G SY+PND+ + S L+TGPNM GKSTY+R + ++V +
Sbjct: 574 HDLQIVQGRHPVVEKVMGRQSYVPNDIRMDP-QTSILLITGPNMSGKSTYMRQLALTVIM 632
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQ+GCFVP +SA + + DQIFTR+GAAD G STFM+EM+E + T+NSL++ D
Sbjct: 633 AQMGCFVPAESAKLPIFDQIFTRIGAADDLISGQSTFMVEMQEANQAVLHATQNSLILFD 692
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
E+GRGT+T+DG +A SI + H TLF+TH+HE+ L + RNV V A+E+
Sbjct: 693 EIGRGTATYDGMALAQSIIEYVHDHVHAKTLFSTHYHELTALEDNLSELRNVHVGAVEKN 752
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNR 758
LV L+QV+ G KSYG+H AK+AG PE++L +A D++ E KT S +
Sbjct: 753 GELVFLHQVENGPADKSYGIHVAKLAGMPEELLNRASDILSRLEEENQGKTISAVTEPRK 812
Query: 759 EEEYFKTVQEGE 770
+ + + QE E
Sbjct: 813 QLKINEEAQEAE 824
>gi|449896268|ref|ZP_21789561.1| DNA mismatch repair protein MutS [Streptococcus mutans R221]
gi|449989438|ref|ZP_21821053.1| DNA mismatch repair protein MutS [Streptococcus mutans NVAB]
gi|450046201|ref|ZP_21838823.1| DNA mismatch repair protein MutS [Streptococcus mutans N34]
gi|449182552|gb|EMB84572.1| DNA mismatch repair protein MutS [Streptococcus mutans NVAB]
gi|449199233|gb|EMC00311.1| DNA mismatch repair protein MutS [Streptococcus mutans N34]
gi|449262451|gb|EMC59900.1| DNA mismatch repair protein MutS [Streptococcus mutans R221]
Length = 849
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 199/684 (29%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I ER + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISERQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTSELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|387926949|ref|ZP_10129628.1| DNA mismatch repair protein MutS [Bacillus methanolicus PB1]
gi|387589093|gb|EIJ81413.1| DNA mismatch repair protein MutS [Bacillus methanolicus PB1]
Length = 870
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 318/641 (49%), Gaps = 58/641 (9%)
Query: 176 DDSELKNA--RLLPEMCLTTATHCLRSLINYLELMNNE--DNMNQFSIHSI-DYSKYVHM 230
DD+ ++++ L E+ LINYL D++ S + + Y K +
Sbjct: 200 DDTNVQSSYKHLFEEINNEKLRETFARLINYLYRTQKRSLDHLQPVSAYQVHQYMKIDYF 259
Query: 231 SSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHA 290
S + + +G SLL +LD +T G RLL QW+ +PL + D+I +R +
Sbjct: 260 SKRNLELTETIRSKGKKG-----SLLWLLDETKTAMGGRLLKQWIDRPLINQDSIEKRLS 314
Query: 291 AVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL 350
V L+N+ R +L E L+ + D++ L R+ +D ++ + Q+P L I+
Sbjct: 315 FVETLMNHYFERQDLRE-KLKEVYDLERLVGRVAFGNVNARDLIQLKRSLLQVPHLKEIV 373
Query: 351 ESLVQNVEASNLNTILSSLQSL-KMMDR----------------KDAVMDKMKEY----- 388
L QN EA N L + + +++R +D +++ +Y
Sbjct: 374 TGL-QNKEAKNFAGRLDPCEEVTDLLERALVENPPVSIREGNFIQDGYNEELDKYRDAMR 432
Query: 389 --------LESTARRLNLVADKTIKLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGG 438
LES R + K++K+ N G+ +T L+ D +Y T+
Sbjct: 433 NGKTWIAMLESQEREKTGI--KSLKIGYNRVFGYYIEVTKANLHLLKDGQYERKQTLANA 490
Query: 439 VRFQDDRLATANTQ-YQAIQREYETHQQSIVE--EVIGISAGYTQTLNQLSDVLAQFDVL 495
RF L +A ++ E Q VE E + + Y L L+ +++ DVL
Sbjct: 491 ERFITPELKEKEALILEAEEKSVELEYQLFVELREYVKV---YIPRLQALAKTVSELDVL 547
Query: 496 VSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSF 554
F A+ + + RP +V+ + RHP+VE + Y+PND Y E
Sbjct: 548 QCF--ATVSEERHFTRPSFS--DERRIVIKEGRHPVVEKVMNAQEYVPNDCYM-DAEREI 602
Query: 555 NLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIST 614
L+TGPNM GKSTY+R I ++ LAQIGCFVP A + + DQ+FTR+GAAD G ST
Sbjct: 603 LLITGPNMSGKSTYMRQIALTAILAQIGCFVPASEAVLPIFDQVFTRIGAADDLISGQST 662
Query: 615 FMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHF 674
FM+EM E I T++SL++ DE+GRGTST+DG +A +I + + TLF+TH+
Sbjct: 663 FMVEMLEAKNAITNATQDSLILFDEIGRGTSTYDGMALAQAIIEYIHNRIGAKTLFSTHY 722
Query: 675 HEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQA 734
HE+ +L +P +NV VSA+EQ +V L+++K G+ KSYG+H A++A PE+++ +A
Sbjct: 723 HELTVLEEELPKVKNVHVSAVEQNGKVVFLHKIKEGAADKSYGIHVAQLAELPEELINRA 782
Query: 735 RDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFD 775
++++ +E D++T + ++ E ++E + FD
Sbjct: 783 NEILQTFEKKEDSETAAKNDDRQTENNINAIIEETQLSFFD 823
>gi|171778537|ref|ZP_02919664.1| hypothetical protein STRINF_00516 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282760|gb|EDT48184.1| DNA mismatch repair protein MutS [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 855
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 191/682 (28%), Positives = 332/682 (48%), Gaps = 64/682 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +D+ T +FY + D +++L++ I+ +E ++
Sbjct: 139 GLAYMDVSTGEFYATSLSD---FTSLKSEILNLKAREIVV-------------------- 175
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
G +E + L++ +N L+ F+ ++ L+ L+ Y+
Sbjct: 176 ----GYDLSEDEQHSLVKQLNLLLSFEQERYEDVHLIDLNLTALEISAAEKLLQYVHTTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ MS SSL +L + + +++ + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMSYTTKSSLDLL--ENARTSKKHGSLYWLLDETKTAMGMR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL + + I ER V + ++N R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRNWIDRPLVNQEQIEERQNIVQVFLDNFFERSDLTD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + Q+P + +ILES +N+I L L+SL
Sbjct: 349 PKDLLQLGHTLGQVPTIKAILESFDSPYLDKLVNSIDTLPELESLISSAIDPDAQAVITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE-NSPQGFAYRITMKL 421
+ +D+ VM + ++ E A+ +K++ N G+ + +T
Sbjct: 409 GSIIRTGFDETLDKYRKVMREGTSWIAEIEAKERAASGITNLKIDYNKKDGYYFHVTNSN 468
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ + D + T++ RF LA + + + + + I V Y
Sbjct: 469 LSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFMRVRAQVERYISR 528
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSY 540
L L+ ++ DVL S ++ + YVRP + + + + RH +VE + G Y
Sbjct: 529 LQDLAKAISTVDVLQSLAVVAEN--NHYVRPSFN--DSHEIKIEKGRHAVVEKVMGTQEY 584
Query: 541 IPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFT 600
IPN + F + L+TGPNM GKSTY+R + ++V +AQ+G +V +S ++ V D IFT
Sbjct: 585 IPNTITFGRN-TNIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVSLPVFDAIFT 643
Query: 601 RVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAREL 660
R+GAAD G STFM+EM E IK+ +E SL++ DELGRGT+T+DG +A SI +
Sbjct: 644 RIGAADDLISGQSTFMVEMMEANQAIKRASEKSLILFDELGRGTATYDGMALAQSIIEYI 703
Query: 661 ASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHC 720
H + T+FATH+HE+ LS + NV V+ LE+ ++ L+++ G KSYG+H
Sbjct: 704 HDHIRAKTMFATHYHELTSLSTALTHLVNVHVATLERNGDVTFLHKIAEGPADKSYGIHV 763
Query: 721 AKMAGYPEDMLEQARDLMKEYE 742
AK+AG PED+L++A ++ E
Sbjct: 764 AKIAGLPEDLLQRANSILTNLE 785
>gi|417006483|ref|ZP_11945053.1| DNA mismatch repair protein MutS [Streptococcus agalactiae FSL
S3-026]
gi|341576664|gb|EGS27075.1| DNA mismatch repair protein MutS [Streptococcus agalactiae FSL
S3-026]
Length = 858
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 202/723 (27%), Positives = 356/723 (49%), Gaps = 73/723 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREIVVGYQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIIVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAEN--HHYVRP--KFNDEHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM GKSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + T+FATH+HE+ LS + NV V+ LE++ + L++++ G KS
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYEYSLD--TKTPSGDE-TNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E +PS + T + EE Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDVLSQLEADAVQLIVSPSQEAVTADLNEELDSEKQQGQLS 819
Query: 773 MFD 775
+F+
Sbjct: 820 LFE 822
>gi|336394731|ref|ZP_08576130.1| DNA mismatch repair protein MutS [Lactobacillus farciminis KCTC
3681]
Length = 878
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 291/562 (51%), Gaps = 56/562 (9%)
Query: 220 HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPL 279
S + S Y+ M + S+L + + + + +LL +LD +T G RLL QW+ +PL
Sbjct: 244 QSYETSAYLLMDHSAQSNLELF--KNIRTNKKSGTLLWLLDETKTAMGSRLLKQWLARPL 301
Query: 280 KDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEG 339
+D + +R V + ++N R + +Y L + D++ LA R+ +D ++
Sbjct: 302 ISVDKLKQRQHFVQVFLDNYFQRSSFQDY-LTKVYDLERLAGRVAYGTVNGRDLIQLKTS 360
Query: 340 VSQLPKLISIL-----ESLVQNVEASNLNTILSSLQSLKMMDR-----------KDAVMD 383
+ Q+P++ SIL + L VE + + L +++ K+ D
Sbjct: 361 LQQVPEIKSILLDIGDDELTAFVEKIDEVADIRDLIDQAIVEEAPISVTGGGLIKEGYND 420
Query: 384 KMKEYLESTARRLNLVADKTIKLENSP----------QGFAYRITMKLNNSID----DRY 429
++ +YL+++ +A K ++ + F Y I + N ID DRY
Sbjct: 421 QLDQYLDASKNGKKWLATLKAKEQDETGINNLKIGYNKVFGYYIEVSRAN-IDKVPEDRY 479
Query: 430 TILDTVRGGVRF-------QDDRLATANTQYQAIQREYETH-QQSIVEEVIGISAGYTQT 481
T T+ R+ ++ + A + + ++ H +Q I +++ I A
Sbjct: 480 TRKQTLVNAERYITPELKEKESMILEAEEKSKGLEYHLFDHIRQKIKDQIRRIQA----- 534
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSY 540
L+++L+Q DVL SF++ S YV P + L + RHP+VE + SY
Sbjct: 535 ---LANILSQLDVLQSFAVVSEDYH--YVAPEF--VDKHELKITNGRHPVVEKVLSNNSY 587
Query: 541 IPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFT 600
IPNDV F + L+TGPNM GKSTY+R + + V +AQIGCFVP +SA + + D IFT
Sbjct: 588 IPNDVNFDK-DTDILLITGPNMSGKSTYMRQLALIVIMAQIGCFVPAESAKLPIFDHIFT 646
Query: 601 RVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAREL 660
R+GAAD G STFM+EM+E +K TENSL+I DE+GRGT+T+DG +A +I +
Sbjct: 647 RIGAADDLISGDSTFMVEMREANDALKNATENSLIIFDEIGRGTATYDGMALAQAIIEYI 706
Query: 661 ASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHC 720
+ T+F+TH+HE+ L +P +NV V A E+ +LV L++V PG KSYG+H
Sbjct: 707 DKNVHAMTMFSTHYHELTELEAQLPGLKNVHVDASEENGDLVFLHKVLPGPADKSYGIHV 766
Query: 721 AKMAGYPEDMLEQARDLMKEYE 742
AK+AG PE++L A ++ E
Sbjct: 767 AKLAGLPEEVLNSAGKILSSLE 788
>gi|357637688|ref|ZP_09135563.1| DNA mismatch repair protein MutS [Streptococcus macacae NCTC 11558]
gi|357586142|gb|EHJ53345.1| DNA mismatch repair protein MutS [Streptococcus macacae NCTC 11558]
Length = 849
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 190/633 (30%), Positives = 318/633 (50%), Gaps = 41/633 (6%)
Query: 162 EEDLMQ-DVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIH 220
EE L Q +N L+ F+ K+++L+ + L+ Y+ + + + +
Sbjct: 183 EEQLFQKQMNLLLSFERETYKDSQLIDQNLDALEITAAEKLLQYVHMTQKRELSHLQKLV 242
Query: 221 SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLK 280
+ Y+ M+ A SSL +L + + S + + SL +LD +T G RLL W+ +PL
Sbjct: 243 HYEIKDYLQMTYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTRLLRVWIDRPLV 300
Query: 281 DLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGV 340
+ D I+ R V + + + R +L + +L+G+ D++ LA R+ KA KD ++ +
Sbjct: 301 NRDLIINRQNIVQVFLEHFFERSDLSD-SLKGVYDIERLASRVSFGKANPKDLLQLSHTL 359
Query: 341 SQLPKLISILES--------LVQNVEA-----SNLNTILSSLQSLKMMDRK------DAV 381
+Q+P + +ILES LV ++ S + T + + + + D
Sbjct: 360 AQVPAIKAILESFDSPYLKALVDQIDPLPELESIIRTAIDPDAQITVTEGNIIRSGFDET 419
Query: 382 MDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKLNNSIDDRYTIL 432
+DK ++ + A + + K T+K++ N G+ + +T + + D +
Sbjct: 420 LDKYRKVMREGASWIADIEAKEKEASGINTLKIDYNKKDGYYFHVTNSNLSLVPDYFFRK 479
Query: 433 DTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQF 492
T++ RF LA + + E + I V Y L QL+ LA
Sbjct: 480 ATLKNSERFGTAELAKIEGEMLEAREESANLEYMIFMRVRKQVELYIGRLQQLAKHLATV 539
Query: 493 DVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGE 551
DVL S ++ + Y++P + + RH +VE G+ YIPN +YF S +
Sbjct: 540 DVLQSLAVVAEN--NHYIKPVFN--DQEEIRIENGRHAVVEKVMGIQEYIPNSIYFDS-K 594
Query: 552 VSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRG 611
S L+TGPNM GKSTY+R + ++V +AQIG FV D A++ + D IFTR+GAAD G
Sbjct: 595 TSIQLITGPNMSGKSTYMRQLALAVIMAQIGSFVSADLASLPIFDAIFTRIGAADDLISG 654
Query: 612 ISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFA 671
STFM+EM E IKK + SL++ DELGRGT+T+DG +A +I + T+FA
Sbjct: 655 QSTFMVEMMEANQAIKKASRQSLILFDELGRGTATYDGMALAQAIIEHIHDRIGAKTMFA 714
Query: 672 THFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDML 731
TH+HE+ LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P+++L
Sbjct: 715 THYHELTDLSTKLTNLVNVHVATLEKDGEVTFLHKITDGPADKSYGIHVAKIAGLPDELL 774
Query: 732 EQARDLMKEYEYS---LDTKTPSGDETNNREEE 761
A ++ + E S + +T + E N+ +E
Sbjct: 775 SHADHILFDLESSSQAVSVQTKAKAEQNHSVDE 807
>gi|22538235|ref|NP_689086.1| DNA mismatch repair protein MutS [Streptococcus agalactiae 2603V/R]
gi|25012092|ref|NP_736487.1| DNA mismatch repair protein MutS [Streptococcus agalactiae NEM316]
gi|76798537|ref|ZP_00780770.1| DNA mismatch repair protein MutS [Streptococcus agalactiae 18RS21]
gi|77414039|ref|ZP_00790210.1| DNA mismatch repair protein MutS [Streptococcus agalactiae 515]
gi|44888212|sp|Q8DWW1.1|MUTS_STRA5 RecName: Full=DNA mismatch repair protein MutS
gi|44888214|sp|Q8E2R3.1|MUTS_STRA3 RecName: Full=DNA mismatch repair protein MutS
gi|22535147|gb|AAN00959.1|AE014286_22 DNA mismatch repair protein HexA [Streptococcus agalactiae 2603V/R]
gi|24413636|emb|CAD47713.1| DNA mismatch repair protein MutS [Streptococcus agalactiae NEM316]
gi|76586101|gb|EAO62626.1| DNA mismatch repair protein MutS [Streptococcus agalactiae 18RS21]
gi|77159921|gb|EAO71061.1| DNA mismatch repair protein MutS [Streptococcus agalactiae 515]
Length = 858
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 202/723 (27%), Positives = 356/723 (49%), Gaps = 73/723 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREIVVGYQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIIVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAENYH--YVRP--KFNDQHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM GKSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + T+FATH+HE+ LS + NV V+ LE++ + L++++ G KS
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYEYSLD--TKTPSGDE-TNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E +PS + T + EE Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDILSQLEADAVQLIVSPSQEAVTADLNEELDSEKQQGQLS 819
Query: 773 MFD 775
+F+
Sbjct: 820 LFE 822
>gi|219117187|ref|XP_002179388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409279|gb|EEC49211.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 363
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 207/353 (58%), Gaps = 11/353 (3%)
Query: 400 ADKTIKLENSPQGFAYRITMK-----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQ 454
A T+KLE + GF +R+T L N + + I ++ GV F L T Q
Sbjct: 12 AQATVKLETADDGFLFRLTNTNDTKLLQNQLGNVVQIHKLLKNGVSFSTKELRQLATAQQ 71
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
+ EY+ Q+ +V++ + ++A Y+ L + D +A DVLV + + +P Y RP +
Sbjct: 72 DLMAEYDRQQKVVVQDALKVAATYSVVLQRAFDAVATLDVLVGLAHQAAYSPHGYCRPTL 131
Query: 515 ----KPMGTGSLVLNQCRHPIVELQGGVS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
G G + L RHP VE+Q VS YIPNDV + LVTGPNMGGKSTYI
Sbjct: 132 IDGDDCAGHG-IQLQGARHPCVEVQESVSDYIPNDVDLTHDRSNVLLVTGPNMGGKSTYI 190
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R++G V LAQIG FVPC SATI + I RVGA D Q +GISTF+ EM E+A +++
Sbjct: 191 RAVGAIVLLAQIGAFVPCQSATIHIRHHILARVGAGDWQDQGISTFLAEMLESAAILRTA 250
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T SL+I+DELGRGTSTFDG+G+A +IA + + +FATHFHE+ L+ V RN
Sbjct: 251 TARSLIIVDELGRGTSTFDGYGLARAIAEYMVRNVGNLCVFATHFHELTSLADVFTNVRN 310
Query: 690 VQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V+A L LYQ++PG C++S+G+ A++AG P +++ A+ +E E
Sbjct: 311 CHVTAQRDVQGLTFLYQIQPGPCLESFGIQVAELAGVPAVVVQDAQRKARELE 363
>gi|449893954|ref|ZP_21789009.1| DNA mismatch repair protein MutS [Streptococcus mutans SF12]
gi|449255571|gb|EMC53419.1| DNA mismatch repair protein MutS [Streptococcus mutans SF12]
Length = 849
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 199/684 (29%), Positives = 334/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDNQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I ER + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISERQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTSELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|288906383|ref|YP_003431605.1| DNA Mismatch repair ATPase (MutS family) [Streptococcus
gallolyticus UCN34]
gi|306832430|ref|ZP_07465583.1| DNA mismatch repair protein MutS [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325979397|ref|YP_004289113.1| DNA mismatch repair protein mutS [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338874|ref|YP_006035043.1| DNA mismatch repair protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288733109|emb|CBI14690.1| DNA Mismatch repair ATPase (MutS family) [Streptococcus
gallolyticus UCN34]
gi|304425470|gb|EFM28589.1| DNA mismatch repair protein MutS [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325179325|emb|CBZ49369.1| DNA mismatch repair protein mutS [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334281510|dbj|BAK29084.1| DNA mismatch repair protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 856
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 186/688 (27%), Positives = 338/688 (49%), Gaps = 72/688 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F+ + D +++L + I+ +E ++
Sbjct: 137 TFGLAYMDVSTGEFFSTSLSD---FTSLRSEILNLKAREVVV------------------ 175
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
G + +E + L++ +N L+ F+ ++ L+ L+ Y+
Sbjct: 176 ------GYELSETEQHSLVKQLNLLLSFEQERYEDVHLIDPDLTALEISAAEKLLQYVHT 229
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS SSL +L + + +++ + SL +LD +T G
Sbjct: 230 TQKRELSHLQKLVHYEIKDYLQMSYTTKSSLDLL--ENARTSKKHGSLYWLLDETKTAMG 287
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL W+ +PL + I ER V + ++N R +L + +L+G+ D++ LA R+ K
Sbjct: 288 MRLLRNWIDRPLVNQAQIEERQNIVQVFLDNFFERSDLTD-SLKGVYDIERLASRVSFGK 346
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRK--------- 378
A KD ++ ++Q+P + +ILES E+ +L+ +++++ +L ++
Sbjct: 347 ANPKDLLQLGHTLAQVPTIKAILESF----ESPHLDKLVNNIDTLPELESLIRSAIAPDA 402
Query: 379 --------------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAY 415
D +DK ++ + + + K +K++ N G+ +
Sbjct: 403 PAVITEGSIIRTGFDETLDKYRKVMREGTSWIAEIEAKERAASGITNLKIDYNKKDGYYF 462
Query: 416 RITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
+T + + D + T++ RF LA + + + + + I V G
Sbjct: 463 HVTNSNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFMRVRGQV 522
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-L 534
Y L L+ ++ DVL S ++ + YVRP + + + + RH +VE +
Sbjct: 523 ERYITRLQDLAKAISTVDVLQSLAVVAEN--NHYVRPTFN--DSHEIKIEKGRHAVVEKV 578
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G YIPN + F + +++ L+TGPNM GKSTY+R + ++V +AQ+G +V +S + V
Sbjct: 579 MGTQEYIPNTITFDA-DINIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVNLPV 637
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
D IFTR+GAAD G STFM+EM E IK+ + SL++ DELGRGT+T+DG +A
Sbjct: 638 FDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASSQSLILFDELGRGTATYDGMALAQ 697
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
SI + +H T+FATH+HE+ LS + NV V+ LE+ ++ L+++ G K
Sbjct: 698 SIIEYIHNHIGAKTMFATHYHELTALSTSLTHLINVHVATLEKNGDVTFLHKIAEGPADK 757
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+H AK+AG PE++L++A ++ E
Sbjct: 758 SYGIHVAKIAGLPEELLQRADSILTNLE 785
>gi|417933705|ref|ZP_12577025.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
F0392]
gi|340770275|gb|EGR92790.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
F0392]
Length = 844
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 324/647 (50%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDIHLLDSRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + I++R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISTAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + ++S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-TEDISIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P ++L +A ++ + E S T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLE-SQGTESPA 793
>gi|450072842|ref|ZP_21848815.1| DNA mismatch repair protein MutS [Streptococcus mutans M2A]
gi|449210723|gb|EMC11158.1| DNA mismatch repair protein MutS [Streptococcus mutans M2A]
Length = 849
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAVDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|387787015|ref|YP_006252111.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
gi|379133416|dbj|BAL70168.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
Length = 849
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAVDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|450106968|ref|ZP_21860781.1| DNA mismatch repair protein MutS [Streptococcus mutans SF14]
gi|450132413|ref|ZP_21870043.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML8]
gi|449153190|gb|EMB56878.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML8]
gi|449222661|gb|EMC22380.1| DNA mismatch repair protein MutS [Streptococcus mutans SF14]
Length = 849
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|449943285|ref|ZP_21806343.1| DNA mismatch repair protein MutS [Streptococcus mutans 11A1]
gi|449149448|gb|EMB53250.1| DNA mismatch repair protein MutS [Streptococcus mutans 11A1]
Length = 849
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLNDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAVDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|449886728|ref|ZP_21786393.1| DNA mismatch repair protein MutS [Streptococcus mutans SA41]
gi|449914234|ref|ZP_21795499.1| DNA mismatch repair protein MutS [Streptococcus mutans 15JP3]
gi|449936544|ref|ZP_21804032.1| DNA mismatch repair protein MutS [Streptococcus mutans 2ST1]
gi|450040377|ref|ZP_21836770.1| DNA mismatch repair protein MutS [Streptococcus mutans T4]
gi|450076207|ref|ZP_21849744.1| DNA mismatch repair protein MutS [Streptococcus mutans N3209]
gi|450153979|ref|ZP_21877477.1| DNA mismatch repair protein MutS [Streptococcus mutans 21]
gi|449158390|gb|EMB61807.1| DNA mismatch repair protein MutS [Streptococcus mutans 15JP3]
gi|449165514|gb|EMB68518.1| DNA mismatch repair protein MutS [Streptococcus mutans 2ST1]
gi|449199018|gb|EMC00103.1| DNA mismatch repair protein MutS [Streptococcus mutans T4]
gi|449212791|gb|EMC13142.1| DNA mismatch repair protein MutS [Streptococcus mutans N3209]
gi|449238250|gb|EMC37024.1| DNA mismatch repair protein MutS [Streptococcus mutans 21]
gi|449253805|gb|EMC51743.1| DNA mismatch repair protein MutS [Streptococcus mutans SA41]
Length = 849
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKTREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|329117512|ref|ZP_08246229.1| DNA mismatch repair protein MutS [Streptococcus parauberis NCFD
2020]
gi|326907917|gb|EGE54831.1| DNA mismatch repair protein MutS [Streptococcus parauberis NCFD
2020]
Length = 851
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 188/686 (27%), Positives = 339/686 (49%), Gaps = 72/686 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +DL T +F++ + D ++++ + I+ KE L+ +
Sbjct: 139 GLAYMDLATGEFFVTALED---FASICSEILNLKAKEVLVGYD----------------- 178
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
++G++ EE L++ N L+ +++ E+ +++LL L+ Y+
Sbjct: 179 --LSGQE-----EEILVKQYNLLLSYEEEEIDDSKLLDNNLSIIEKMVASKLLAYVHHTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
D ++ + + + Y+ MS A SSL +L + + + + + SL +LD+ +T G R
Sbjct: 232 MRDLIHLQKVVHYEINDYLQMSYATKSSLDLL--ENARTGKKHGSLYWLLDQTKTAMGMR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL +A+++R + +L++N R +L + +L+G+ D++ L+ R+ K
Sbjct: 290 LLRAWIDRPLISKEAVIQRQEIIQVLLDNFIERSDLSD-SLKGVYDIERLSSRVSFGKVN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR------------ 377
KD ++ ++Q+P + +ILES+ ++ +L +++ + + ++
Sbjct: 349 PKDLLQLGHTLAQVPTIKAILESM----DSPHLEGLIAGIDPIPELEHLIQSAIDPDAPA 404
Query: 378 --------KDAVMDKMKEYLESTARRLNLVADKTIKLE------------NSPQGFAYRI 417
K ++ Y + +AD +K N G+ + +
Sbjct: 405 TISEGNIIKTGFDKQLDHYRKVMKEGTGWIADIEMKERQASGINNLKIDYNKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
T + + D + T++ R+ LA Q + E T + I ++
Sbjct: 465 TNSNLSLVPDHFFRKATLKNSERYGTTELAKIEGQMLEAREESSTLEYDIFMQLRSRVEN 524
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGG 537
Y L QL+ +A DVL S ++ Y+RP +++ RH +VE
Sbjct: 525 YIDRLQQLAKSIAAVDVLQSLAV--VAEKNHYIRPSFTDHQEINII--NGRHAVVEKVMS 580
Query: 538 V-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
V YIPN + F S E + L+TGPNM GKSTY+R + ++ +AQ+G +V D A I + D
Sbjct: 581 VKEYIPNTIQF-SQETNIQLITGPNMSGKSTYMRQLALTSIMAQLGSYVAADLAEIPIFD 639
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E IK + SL++ DELGRGT+T+DG +A SI
Sbjct: 640 AIFTRIGAADDLISGQSTFMVEMMEANQAIKGASPRSLILFDELGRGTATYDGMALAQSI 699
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ H T+FATH+HE+ LS + + NV V+ LE+ + L+++ G KSY
Sbjct: 700 IEFIHDHVGAKTMFATHYHELTDLSSRLKSLTNVHVATLEENGEVTFLHKIAQGPADKSY 759
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
G+H AK+AG P+++L++A ++++ E
Sbjct: 760 GIHVAKIAGLPKELLQRADAILQKLE 785
>gi|418967666|ref|ZP_13519317.1| DNA mismatch repair protein MutS [Streptococcus mitis SK616]
gi|383343081|gb|EID21277.1| DNA mismatch repair protein MutS [Streptococcus mitis SK616]
Length = 844
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 191/646 (29%), Positives = 323/646 (50%), Gaps = 62/646 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLAAVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +DK + L E T + A + T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I EEV + Y Q L L+ +A DVL S ++ + + +RP + + + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRPEFR--DDSRIDIQK 569
Query: 527 CRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RH +VE + G +YIPN + ++S L+TGPNM GKSTY+R + ++ +AQ+G +V
Sbjct: 570 GRHAVVEKVMGAQTYIPNTIQMAE-DISIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYV 628
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT+
Sbjct: 629 PAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTA 688
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L+
Sbjct: 689 TYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLINVHVATLEQDGQVTFLH 748
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
+++PG KSYG+H AK+AG P D+L +A ++ + E S T++P+
Sbjct: 749 KIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-SQGTESPA 793
>gi|417794024|ref|ZP_12441287.1| DNA mismatch repair protein MutS [Streptococcus oralis SK255]
gi|334271134|gb|EGL89528.1| DNA mismatch repair protein MutS [Streptococcus oralis SK255]
Length = 844
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 321/632 (50%), Gaps = 64/632 (10%)
Query: 162 EEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHS 221
E+ L + +N ++ ++ ++ LL L+ Y+ + + +
Sbjct: 184 EQILSRQMNLVLSYEKESFEDVHLLDSRLAAVEQAAASKLLQYVHRTQMRELNHLKPVIR 243
Query: 222 IDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKD 281
+ ++ M A +SL ++ + + S + SL +LD +T G RLL W+ +PL D
Sbjct: 244 YEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAMGMRLLRSWIHRPLID 301
Query: 282 LDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVS 341
+ IV+R V + +++ R +L + +L+G+ D++ LA R+ K KD ++ +S
Sbjct: 302 KERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFGKTNPKDLLQLATTLS 360
Query: 342 QLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--------------DAVM 382
+P++ +ILE + Q A + L+ I L SL S + D +
Sbjct: 361 SVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHVITEGGIIRTGFDETL 420
Query: 383 DKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILD 433
DK + L E T+ + + A + T+K++ N G+ + +T ++ +
Sbjct: 421 DKYRRVLREGTSWIVEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKA 480
Query: 434 TVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
T++ RF + LA +AN +Y+ R I EEV + Y Q
Sbjct: 481 TLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR--------IREEV----SKYIQR 528
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVE-LQGGVS 539
L L+ +A DVL S ++ + + +RP G S + + + RH +VE + G +
Sbjct: 529 LQTLAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQKGRHAVVEKVMGAQT 583
Query: 540 YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIF 599
YIPN + S + S L+TGPNM GKSTY+R + ++ +AQ+G +VP +SA + + D IF
Sbjct: 584 YIPNSIQM-SEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAYLPIFDAIF 642
Query: 600 TRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARE 659
TR+GAAD G STFM+EM E I T+NSL++ DELGRGT+T+DG +A SI
Sbjct: 643 TRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEY 702
Query: 660 LASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVH 719
+ H TLFATH+HE+ L + NV V+ LEQ+ + L++++PG KSYG+H
Sbjct: 703 IHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIH 762
Query: 720 CAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
AK+AG P ++L +A ++ + E + T++P+
Sbjct: 763 VAKIAGLPAELLARADKILTQLE-NQGTESPA 793
>gi|307710199|ref|ZP_07646643.1| DNA mismatch repair protein MutS [Streptococcus mitis SK564]
gi|307619179|gb|EFN98311.1| DNA mismatch repair protein MutS [Streptococcus mitis SK564]
Length = 844
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/567 (32%), Positives = 296/567 (52%), Gaps = 64/567 (11%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A +SL ++ + + S + SL +LD +T G RLL W+ +PL D + IV
Sbjct: 249 FLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAMGMRLLRSWIHRPLIDKERIV 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V + +++ R +L + +L+G+ D++ LA R+ K KD ++ +S +P++
Sbjct: 307 QRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFGKTNPKDLLQLATTLSSVPRI 365
Query: 347 ISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--------------DAVMDKMKE 387
+ILE + Q+ + L+ I L SL S + D +DK +
Sbjct: 366 RAILEGMEQSALSYLIEQLDRIPELESLISAAIAPEAPHVITDGGIIRTGFDETLDKYRR 425
Query: 388 YLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
L + + K T+K++ N G+ + +T ++ + T++
Sbjct: 426 VLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNS 485
Query: 439 VRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
RF + LA +AN +Y+ R I EEV + Y Q L L+
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYEIFMR--------IREEV----SKYIQRLQALA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVE-LQGGVSYIPND 544
+A DVL S +I + + +RP G S + + + RH +VE + G +YIPN
Sbjct: 534 QGIATVDVLQSLAIVAET--QHLIRP---EFGDDSQIDIQKGRHAVVEKVMGAQTYIPNT 588
Query: 545 VYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGA 604
+ + + S L+TGPNM GKSTY+R + ++ +AQ+G +VP +SA + + D IFTR+GA
Sbjct: 589 IQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAIMAQMGSYVPAESARLPIFDAIFTRIGA 647
Query: 605 ADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR 664
AD G STFM+EM E I T+NSL++ DELGRGT+T+DG +A SI + H
Sbjct: 648 ADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEHI 707
Query: 665 QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMA 724
TLFATH+HE+ L+ + NV V+ LEQ+ + L++++PG KSYG+H AK+A
Sbjct: 708 GAKTLFATHYHELTSLASSLEHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKIA 767
Query: 725 GYPEDMLEQARDLMKEYEYSLDTKTPS 751
G P D+L +A ++ + E S T++P+
Sbjct: 768 GLPADLLARADKILTQLE-SQGTESPA 793
>gi|450010873|ref|ZP_21828835.1| DNA mismatch repair protein MutS [Streptococcus mutans A19]
gi|450023558|ref|ZP_21830673.1| DNA mismatch repair protein MutS [Streptococcus mutans U138]
gi|449189860|gb|EMB91480.1| DNA mismatch repair protein MutS [Streptococcus mutans A19]
gi|449193165|gb|EMB94556.1| DNA mismatch repair protein MutS [Streptococcus mutans U138]
Length = 849
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKTREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLNDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|421276331|ref|ZP_15727154.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
gi|395878284|gb|EJG89351.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
Length = 844
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 313/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVIGYDLSEVEEQILSRQMNLVLSYEQETYEDVHLLDSRLTTVEGAASGKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELSHLKPVIRYEIKDFLQMDFATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+++PL DLD I+ER V + ++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIQRPLIDLDRIIERQEVVQVFLDYFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K+ KD ++ + +P++ +ILE + Q A L+ I L +L S +
Sbjct: 346 KSNPKDLLQLATTLGSVPRIRAILEGMEQPALAYLIEQLDAIPELENLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEVKERENSGINTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL ++ + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIAAVDVLQGLAV--VAEKQHLIRP---EFGQESRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 NGRHAVVEKVMGAQTYIPNSIQMDE-DTSIQLITGPNMSGKSTYMRQLAITAVMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESARLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLEASLEHLVNVHVATLEQNGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L++A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLKRADAILTQLE 785
>gi|212639351|ref|YP_002315871.1| DNA mismatch repair protein MutS [Anoxybacillus flavithermus WK1]
gi|212560831|gb|ACJ33886.1| Mismatch repair ATPase (MutS family) [Anoxybacillus flavithermus
WK1]
Length = 854
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 299/586 (51%), Gaps = 66/586 (11%)
Query: 201 LINYLELMNNE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGI 258
L+NYL D++ ++ +D HM + S ++ + S SL +
Sbjct: 224 LLNYLVKTQKRHLDHLQPVELYEVD----AHMKIDMYSKRNLELTETIRSKGKTGSLFWL 279
Query: 259 LDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQS 318
LD T G RLL QW+ +PL D + I +R V L+ + R L +Y LRG+ D++
Sbjct: 280 LDETMTAMGGRLLKQWIDRPLLDREKIEQRWHFVEQLLIHYFERQELRDY-LRGVYDLER 338
Query: 319 LAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------ESLVQNVE-A 359
LA R+ +D ++ + + Q+P + S+L E LVQ +E A
Sbjct: 339 LAGRVAFGNVNARDLIQLKKSLKQVPFISSLLMQIQDDHVQSFAKHLDACEELVQLLEEA 398
Query: 360 SNLNTILSSLQSLKMMDRKDAVMDKMKEY----------LESTARRLNLVADKTIKLE-N 408
N LS + + D + +D+ ++ LE+ R L + K++K+ N
Sbjct: 399 IEENPPLSVREGGIIKDGYNETLDRFRDASRNGKTWIAQLEAKERELTGI--KSLKIGYN 456
Query: 409 SPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQREYET 462
G+ +T L+ + RY T+ RF L + ++++ EYE
Sbjct: 457 RVFGYYIEVTKANLHLLPEGRYERKQTLANAERFVTKELKEKEALILEAEEKSMELEYEL 516
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST----CAPK-PYVRPCMKPM 517
SI E+V Y L +L+ ++Q DVL F+ S C P+ Y R
Sbjct: 517 FV-SIREQV----KQYIVRLQKLAKYMSQLDVLQCFATVSEKYNYCKPQFSYDR------ 565
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
LV+ Q RHP+VE + G Y+PND Y E L+TGPNM GKSTY+R I ++
Sbjct: 566 ---RLVVRQGRHPVVEKVLGANVYVPNDCYM-DAEREMLLITGPNMSGKSTYMRQIALTA 621
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQIGCFVP + A + + DQ+FTR+GAAD G STFM+EM E I T+NSL++
Sbjct: 622 IMAQIGCFVPAEEAILPIFDQVFTRIGAADDLVAGQSTFMVEMLEARHAIVHATQNSLIL 681
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGTST+DG +A ++ + TLF+TH+HE+ L + +P +NV VSA+E
Sbjct: 682 FDEIGRGTSTYDGMALAQAMIEYIHDRIGAKTLFSTHYHELTALEQQLPRLKNVHVSAIE 741
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ N++ L+++K G KSYG+H A++A P D++++A +++E+E
Sbjct: 742 ENGNVIFLHKIKEGPADKSYGIHVAQLAKLPLDLIQRAEQILREFE 787
>gi|421532884|ref|ZP_15979227.1| DNA mismatch repair protein MutS [Streptococcus agalactiae
STIR-CD-17]
gi|403641842|gb|EJZ02754.1| DNA mismatch repair protein MutS [Streptococcus agalactiae
STIR-CD-17]
Length = 857
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 205/747 (27%), Positives = 365/747 (48%), Gaps = 74/747 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREMVVGCQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIIVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAENYH--YVRP--KFNDEHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM KSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSSKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + + T+FATH+HE+ LS + NV V+ LE++ + L++++ G KS
Sbjct: 700 IIEYIHNRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTKTPSGDETNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E L P T + EE + Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDILSQLEADAVQLIVSAPQEAVTADLNEEDSEK-QQGQLS 818
Query: 773 MFDFLQQCLSLSKQKDTNRILHLQETQ 799
+F+ L + ++ + I++L Q
Sbjct: 819 LFEELSNADRVIEELEAIDIMNLTPMQ 845
>gi|449947081|ref|ZP_21807192.1| DNA mismatch repair protein MutS [Streptococcus mutans 11SSST2]
gi|449169045|gb|EMB71834.1| DNA mismatch repair protein MutS [Streptococcus mutans 11SSST2]
Length = 849
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTKLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|290581355|ref|YP_003485747.1| DNA mismatch repair protein [Streptococcus mutans NN2025]
gi|449864684|ref|ZP_21778542.1| DNA mismatch repair protein MutS [Streptococcus mutans U2B]
gi|449869471|ref|ZP_21780118.1| DNA mismatch repair protein MutS [Streptococcus mutans 8ID3]
gi|449932949|ref|ZP_21803054.1| DNA mismatch repair protein MutS [Streptococcus mutans 3SN1]
gi|450005598|ref|ZP_21826759.1| DNA mismatch repair protein MutS [Streptococcus mutans NMT4863]
gi|450030663|ref|ZP_21833354.1| DNA mismatch repair protein MutS [Streptococcus mutans G123]
gi|450051790|ref|ZP_21841027.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM1]
gi|450058934|ref|ZP_21843297.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML4]
gi|450068238|ref|ZP_21847049.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML9]
gi|450092543|ref|ZP_21856048.1| DNA mismatch repair protein MutS [Streptococcus mutans W6]
gi|450100399|ref|ZP_21858755.1| DNA mismatch repair protein MutS [Streptococcus mutans SF1]
gi|450116656|ref|ZP_21864596.1| DNA mismatch repair protein MutS [Streptococcus mutans ST1]
gi|450149199|ref|ZP_21876037.1| DNA mismatch repair protein MutS [Streptococcus mutans 14D]
gi|450164012|ref|ZP_21881083.1| DNA mismatch repair protein MutS [Streptococcus mutans B]
gi|450171968|ref|ZP_21884324.1| DNA mismatch repair protein MutS [Streptococcus mutans SM4]
gi|254998254|dbj|BAH88855.1| DNA mismatch repair protein [Streptococcus mutans NN2025]
gi|449158184|gb|EMB61606.1| DNA mismatch repair protein MutS [Streptococcus mutans 8ID3]
gi|449160796|gb|EMB64037.1| DNA mismatch repair protein MutS [Streptococcus mutans 3SN1]
gi|449188389|gb|EMB90101.1| DNA mismatch repair protein MutS [Streptococcus mutans NMT4863]
gi|449192615|gb|EMB94030.1| DNA mismatch repair protein MutS [Streptococcus mutans G123]
gi|449201604|gb|EMC02594.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM1]
gi|449203589|gb|EMC04446.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML4]
gi|449207233|gb|EMC07911.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML9]
gi|449218096|gb|EMC18118.1| DNA mismatch repair protein MutS [Streptococcus mutans W6]
gi|449220472|gb|EMC20342.1| DNA mismatch repair protein MutS [Streptococcus mutans SF1]
gi|449226760|gb|EMC26251.1| DNA mismatch repair protein MutS [Streptococcus mutans ST1]
gi|449234922|gb|EMC33908.1| DNA mismatch repair protein MutS [Streptococcus mutans 14D]
gi|449242469|gb|EMC41055.1| DNA mismatch repair protein MutS [Streptococcus mutans B]
gi|449243285|gb|EMC41730.1| DNA mismatch repair protein MutS [Streptococcus mutans SM4]
gi|449264755|gb|EMC62090.1| DNA mismatch repair protein MutS [Streptococcus mutans U2B]
Length = 849
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|269926438|ref|YP_003323061.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790098|gb|ACZ42239.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 930
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 212/704 (30%), Positives = 353/704 (50%), Gaps = 62/704 (8%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
+G+A VD+ T +F + E+ +D L+ + + SP ECL+P + + +L ++
Sbjct: 153 IGIAWVDVSTGEFRLMELRGEDASERLQEELARISPAECLIPEGFPYE------LVLSQS 206
Query: 149 KVCMTGRKKN---EFSEEDLMQ--DVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
T R++N + + + L + V L F + K + L A ++
Sbjct: 207 H-ATTVRRQNCDPQVAYQLLCKHFGVRSLDAFGCHDAKAS-------LGAAG----AIYT 254
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
Y+E N SI V M A +L + G+ ++ SLLG++D+
Sbjct: 255 YIEQTNPSLLCMLTSIRMECAEDMVGMDPATRRNLELTRSFGTGGSR--GSLLGVVDQTS 312
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G R + + + PL+DL I R + LV + R + ++ + D++ R
Sbjct: 313 TPMGSRAMRRLINTPLRDLQEIRRRQDIIEPLVQMPQVRARIANQLVQ-IGDLERAVSRC 371
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNT---ILSSLQ-SLKMMD 376
+ + L+D + + + L+ IL Q A S+++T ILS LQ ++ D
Sbjct: 372 TQSGSTLRDFLSLSSALGHVDSLVRILSGTHQQALANLASSIDTCEDILSRLQMAVAEAD 431
Query: 377 RKDAV-----MDKMKEYLES--TAR----RLNLVADKTIKLENSPQG----FAYRITMKL 421
V M ++ + LE +AR RL + + + G F Y I +
Sbjct: 432 DGSPVILPGFMPELGDALEELRSAREWLARLEQKERERTGIRSLKVGYNKVFGYYIEVTR 491
Query: 422 NNS--IDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
N + Y T+ G RF + L ++ + E Q + + + + T
Sbjct: 492 PNLHLVPREYVRKQTISTGERFVTEALKEVESRITRAEDAIERLQNEAIALLRSLVSANT 551
Query: 480 QTLNQLSDVLAQFDVLVSFS-IASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQ-GG 537
+ L + +LA+ D LV+ + +AS C +VRP + + + + RHP+VE G
Sbjct: 552 RRLLATAQLLAEMDALVALAEVASRCG---WVRPLVD--DSDVIEIRNGRHPVVESSLEG 606
Query: 538 VSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQ 597
++PND Y L+TGPNMGGKSTY+R + + V LAQIG FVP +SA I +VD+
Sbjct: 607 ERFVPNDCYIGGNWPRVLLITGPNMGGKSTYLRQVALIVLLAQIGSFVPAESARIGLVDR 666
Query: 598 IFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIA 657
IFTRVGA D RG STFM+EM ETAT++ TE SLV++DE+GRGTST+DG +A ++
Sbjct: 667 IFTRVGAHDDLARGASTFMVEMVETATILNGATERSLVVLDEIGRGTSTYDGMAIAQAVL 726
Query: 658 RELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYG 717
++ + TLFATH+ E+ +++ +P+ +NV VS E+ D++V LY V+PG+ ++YG
Sbjct: 727 EDIHDRVRARTLFATHYLELTTVAKKLPSAQNVHVSVAEERDHIVFLYSVRPGAADRAYG 786
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEE 761
+H A++AG P + +A +++ ++L T G+ T ++E+E
Sbjct: 787 IHVARLAGLPPWVAGRAENIL----HALSAGT-EGESTRDKEDE 825
>gi|449876159|ref|ZP_21782633.1| DNA mismatch repair protein MutS [Streptococcus mutans S1B]
gi|449904938|ref|ZP_21792938.1| DNA mismatch repair protein MutS [Streptococcus mutans M230]
gi|449973522|ref|ZP_21814762.1| DNA mismatch repair protein MutS [Streptococcus mutans 11VS1]
gi|449179451|gb|EMB81662.1| DNA mismatch repair protein MutS [Streptococcus mutans 11VS1]
gi|449252967|gb|EMC50934.1| DNA mismatch repair protein MutS [Streptococcus mutans S1B]
gi|449258777|gb|EMC56337.1| DNA mismatch repair protein MutS [Streptococcus mutans M230]
Length = 849
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVERVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|449969184|ref|ZP_21813059.1| DNA mismatch repair protein MutS [Streptococcus mutans 2VS1]
gi|449174304|gb|EMB76798.1| DNA mismatch repair protein MutS [Streptococcus mutans 2VS1]
Length = 849
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|450144043|ref|ZP_21873792.1| DNA mismatch repair protein MutS [Streptococcus mutans 1ID3]
gi|450159299|ref|ZP_21879377.1| DNA mismatch repair protein MutS [Streptococcus mutans 66-2A]
gi|449151249|gb|EMB54990.1| DNA mismatch repair protein MutS [Streptococcus mutans 1ID3]
gi|449241416|gb|EMC40048.1| DNA mismatch repair protein MutS [Streptococcus mutans 66-2A]
Length = 849
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|449924910|ref|ZP_21799951.1| DNA mismatch repair protein MutS [Streptococcus mutans 4SM1]
gi|449162202|gb|EMB65354.1| DNA mismatch repair protein MutS [Streptococcus mutans 4SM1]
Length = 849
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|449883047|ref|ZP_21784906.1| DNA mismatch repair protein MutS [Streptococcus mutans SA38]
gi|449250298|gb|EMC48364.1| DNA mismatch repair protein MutS [Streptococcus mutans SA38]
Length = 849
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|270291960|ref|ZP_06198175.1| DNA mismatch repair protein HexA [Streptococcus sp. M143]
gi|270279488|gb|EFA25330.1| DNA mismatch repair protein HexA [Streptococcus sp. M143]
Length = 857
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 182 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDVHLLDSRLAAVEQAAASKLLQYVH 241
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 242 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 299
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 300 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 358
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 359 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 418
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 419 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 478
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 479 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 530
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 531 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDNSQIDIQ 581
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G SYIPN + S + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 582 KGRHAVVEKVMGAQSYIPNSIQM-SEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 640
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 641 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 700
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ ++ L
Sbjct: 701 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQGGHVTFL 760
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P ++L +A ++ + E
Sbjct: 761 HKIEPGPADKSYGIHVAKIAGLPGELLARADKILTQLE 798
>gi|397650621|ref|YP_006491148.1| DNA mismatch repair protein MutS [Streptococcus mutans GS-5]
gi|449955937|ref|ZP_21809353.1| DNA mismatch repair protein MutS [Streptococcus mutans 4VF1]
gi|449994773|ref|ZP_21822700.1| DNA mismatch repair protein MutS [Streptococcus mutans A9]
gi|450120898|ref|ZP_21865985.1| DNA mismatch repair protein MutS [Streptococcus mutans ST6]
gi|450127820|ref|ZP_21868765.1| DNA mismatch repair protein MutS [Streptococcus mutans U2A]
gi|450139692|ref|ZP_21872619.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML1]
gi|392604190|gb|AFM82354.1| DNA mismatch repair protein MutS [Streptococcus mutans GS-5]
gi|449170870|gb|EMB73560.1| DNA mismatch repair protein MutS [Streptococcus mutans 4VF1]
gi|449184933|gb|EMB86842.1| DNA mismatch repair protein MutS [Streptococcus mutans A9]
gi|449229792|gb|EMC29087.1| DNA mismatch repair protein MutS [Streptococcus mutans ST6]
gi|449230235|gb|EMC29502.1| DNA mismatch repair protein MutS [Streptococcus mutans U2A]
gi|449232637|gb|EMC31740.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML1]
Length = 849
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLNDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|449911081|ref|ZP_21795000.1| DNA mismatch repair protein MutS [Streptococcus mutans OMZ175]
gi|449258712|gb|EMC56276.1| DNA mismatch repair protein MutS [Streptococcus mutans OMZ175]
Length = 849
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|450034423|ref|ZP_21834378.1| DNA mismatch repair protein MutS [Streptococcus mutans M21]
gi|450110638|ref|ZP_21862212.1| DNA mismatch repair protein MutS [Streptococcus mutans SM6]
gi|449196526|gb|EMB97791.1| DNA mismatch repair protein MutS [Streptococcus mutans M21]
gi|449224638|gb|EMC24264.1| DNA mismatch repair protein MutS [Streptococcus mutans SM6]
Length = 849
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|417939187|ref|ZP_12582480.1| DNA mismatch repair protein MutS [Streptococcus infantis SK970]
gi|343390632|gb|EGV03212.1| DNA mismatch repair protein MutS [Streptococcus infantis SK970]
Length = 843
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 187/637 (29%), Positives = 311/637 (48%), Gaps = 61/637 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVIGYDLSEAEEQILSRQMNLVLSYEQETYEDVHLLDSRLATVEGAASGKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDFATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+++PL D D I+ER V + ++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIQRPLIDKDRILERQEVVQVFLDYFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K+ KD ++ + +P++ +ILE++ Q A L+ I L +L S +
Sbjct: 346 KSNPKDLLQLATTLGSVPRIRAILEAMEQPALAYLIEQLDAIPELENLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGINTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
+ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGHVPAHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I EEV Y Q L L+ +A DVL ++ + +RP P + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQGLAV--VAEKQHLIRPEFGP--DSRIDIQN 569
Query: 527 CRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RH +VE + G +YIPN + S L+TGPNM GKSTY+R + ++ +AQ+G +V
Sbjct: 570 GRHAVVEKVMGAQTYIPNSIQMDEA-TSIQLITGPNMSGKSTYMRQLAITAVMAQMGSYV 628
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P DSA++ + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT+
Sbjct: 629 PADSASLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGTA 688
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ + L+
Sbjct: 689 TYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLEISLEHLVNVHVATLEQNGQVTFLH 748
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++PG KSYG+H AK+AG P D+L++A ++ + E
Sbjct: 749 KIEPGPADKSYGIHVAKIAGLPVDLLKRADTILTQLE 785
>gi|450174687|ref|ZP_21884718.1| DNA mismatch repair protein MutS [Streptococcus mutans SM1]
gi|449248143|gb|EMC46404.1| DNA mismatch repair protein MutS [Streptococcus mutans SM1]
Length = 849
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLAIVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|322388728|ref|ZP_08062325.1| DNA mismatch repair protein HexA [Streptococcus infantis ATCC
700779]
gi|419844218|ref|ZP_14367517.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC
700779]
gi|321140347|gb|EFX35855.1| DNA mismatch repair protein HexA [Streptococcus infantis ATCC
700779]
gi|385702104|gb|EIG39255.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC
700779]
Length = 844
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 314/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVIGYDLSEAEEQILSRQMNLVLSYEQETYEDVHLLDSRLATVEGAASGKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDFATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+++PL DLD I+ER V + ++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIQRPLIDLDRIIERQEVVQVFLDYFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K+ KD ++ + +P++ +ILE + Q A L+ I L +L S +
Sbjct: 346 KSNPKDLLQLATTLGSVPRIRAILEGMEQPALAYLIEQLDAIPELENLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGINTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQGLAVVAEN--QHLIRP---EFGQESRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 NGRHAVVEKVMGAQTYIPNSIQMDE-DTSIQLITGPNMSGKSTYMRQLAITAVMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAQLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLEASLEHLVNVHVATLEQNGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L++A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLKRADAILTQLE 785
>gi|450088206|ref|ZP_21854685.1| DNA mismatch repair protein MutS [Streptococcus mutans NV1996]
gi|449216755|gb|EMC16847.1| DNA mismatch repair protein MutS [Streptococcus mutans NV1996]
Length = 849
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 334/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIESGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTNLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|303233668|ref|ZP_07320322.1| DNA mismatch repair protein MutS [Finegoldia magna BVS033A4]
gi|302495102|gb|EFL54854.1| DNA mismatch repair protein MutS [Finegoldia magna BVS033A4]
Length = 856
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 218/782 (27%), Positives = 379/782 (48%), Gaps = 87/782 (11%)
Query: 26 CVHGEDAELIQRKSNVVYLVKTMGQKDKTLETVLVNK-SNLSCFSHILCVISEDKTLETV 84
C ED +L++ LVK K T TV+ N+ S+ F++++ + +
Sbjct: 86 CEQLEDPKLVKG------LVKRGIIKIYTPATVIENENSDTGNFNYLMSISKK------- 132
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK---NKI 141
+N V ++ +D+ T DD Y +E I + +PKE + ND++ N +
Sbjct: 133 -SNEVAISYIDISTGDVSYTNTTSDDIYKIIENEISKITPKEIIF-----NDHEFSTNSL 186
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
TI + + +T D + +N + +D++ + T C+ +L
Sbjct: 187 ETIASKFSIVLTTVNNGT----DSIDFINSKITYDNTNSE-----------TTNICVANL 231
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
+ Y+ +D ++ S ++++ + S + +L + Q+ + SL G+L+
Sbjct: 232 LKYV-FRYQDDLVHINSSRKYYINEFMEIDSNSVINLEI--QKNLYTNSKNGSLFGVLNH 288
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
+T G RLL ++++PL D + I+ R V + + E +NL E L G+ D+ L
Sbjct: 289 TKTSMGSRLLHSYLERPLMDKEEILIRQNRVEEIFEDYELLVNL-ENCLDGIYDLDRLLA 347
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRKDAV 381
++ K A KD + + ++P L ++L +N++ + L L+ + + K V
Sbjct: 348 KLSYKSANAKDLIALKVSIEKIPHLKNLLNCNKKNIQL--IGEKLDDLRDIYDLINKSIV 405
Query: 382 MD-------------------------------KMKEYLESTARRLNLVADKTIKLE-NS 409
D ++ EY S RL + K +K+ N
Sbjct: 406 DDPPVILTEGNLIKPNFSNELDQLRYNRVNGKNELVEYEMSEKDRLGI---KNLKIVFNK 462
Query: 410 PQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G+ +T N + + Y T+ RF+ L ++ + E + I E
Sbjct: 463 KLGYFIDVTKSNLNKVGEDYEKRQTLTNSSRFKTKELEAIESKILDSEDEIFELEYKIFE 522
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRH 529
++ I + + +D++A DV S S+A Y++P + G ++ + RH
Sbjct: 523 DIRKIILENLSRIKKSADLIAIIDV--SNSLAKCAYLNNYIKPDINTYGLIDVL--ESRH 578
Query: 530 PIVELQGGVS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
PIVEL G S +I ND+ SG+ L+TGPNM GKSTY+R + + L QIG FVP
Sbjct: 579 PIVELSVGQSEFITNDILIGSGKNDIQLITGPNMSGKSTYLRQVALICILNQIGSFVPAT 638
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
A IS+VD+IFTR+G++D+ ++G STFM+EMKE + +IK T NSL+++DE+GRGTSTFD
Sbjct: 639 KANISIVDKIFTRIGSSDNLFKGESTFMVEMKEMSNIIKYATSNSLLVLDEIGRGTSTFD 698
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
G +A +I ++ + + TLFATH+HE+ L + + N++V E D+++ L ++
Sbjct: 699 GLSLAWAIVEYISKNIKAKTLFATHYHELTELEKKLDNLINMKVDIKETNDSIIFLRKIT 758
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT--PSGDETNNREEEYFKTV 766
GS KSYG+ A++AG P+ ++++A+ ++KE + DTK P D E E K +
Sbjct: 759 RGSTDKSYGIEVAELAGMPKTLIKRAKSILKEIDKE-DTKIDFPIADFAVQNEMEDDKNI 817
Query: 767 QE 768
E
Sbjct: 818 HE 819
>gi|383938101|ref|ZP_09991324.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
gi|383714987|gb|EID70970.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
Length = 844
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 319/638 (50%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKENFEDLHLLDSRLATVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +P+ D + I++R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPMIDKERIIQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +DK + L E T + A + T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKERGNSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S +I + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAIVAET--QHLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + + +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMMAIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|449964622|ref|ZP_21811410.1| DNA mismatch repair protein MutS [Streptococcus mutans 15VF2]
gi|449172346|gb|EMB74976.1| DNA mismatch repair protein MutS [Streptococcus mutans 15VF2]
Length = 849
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 197/683 (28%), Positives = 328/683 (48%), Gaps = 66/683 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRK----------- 378
KD ++ + +SQ+P + +ILES + S +N I +L L + R
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQI-DTLPELAALIRSAIDSNAPITIT 407
Query: 379 ---------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMK 420
D +DK + + + + K T+K++ N G+ + +T
Sbjct: 408 EGGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGISTLKIDYNKKDGYYFHVTNS 467
Query: 421 LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQ 480
+ + D + T++ RF LA + + E + I + Y +
Sbjct: 468 NLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYIE 527
Query: 481 TLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVS 539
L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 528 RLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQE 583
Query: 540 YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIF 599
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D IF
Sbjct: 584 YIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAIF 642
Query: 600 TRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARE 659
TR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 643 TRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIEY 702
Query: 660 LASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVH 719
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+H
Sbjct: 703 IHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGIH 762
Query: 720 CAKMAGYPEDMLEQARDLMKEYE 742
AK+AG P+D+L +A ++ + E
Sbjct: 763 VAKIAGLPKDLLNRADHILVDLE 785
>gi|307710940|ref|ZP_07647365.1| DNA mismatch repair protein MutS [Streptococcus mitis SK321]
gi|307617241|gb|EFN96416.1| DNA mismatch repair protein MutS [Streptococcus mitis SK321]
Length = 844
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 318/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLAAVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + I++R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQVLAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++V +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTVVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|374338959|ref|YP_005095679.1| DNA mismatch repair protein MutS [Streptococcus macedonicus ACA-DC
198]
gi|372285079|emb|CCF03413.1| DNA mismatch repair protein MutS [Streptococcus macedonicus ACA-DC
198]
Length = 856
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 178/629 (28%), Positives = 315/629 (50%), Gaps = 45/629 (7%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G + +E + L++ +N L+ F+ ++ L+ L+ Y+
Sbjct: 169 KAREIVVGYELSETEQHSLVKQLNLLLSFEQERYEDVHLIDPDLTALEISAAEKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + Y+ MS SSL +L + + +++ + SL +LD +T
Sbjct: 229 TTQKRELSHLQKLVHYEIKDYLQMSYTTKSSLDLL--ENARTSKKHGSLYWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL + I ER V + ++N R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRNWIDRPLVNQVQIEERQNIVQVFLDNFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRK-------- 378
KA KD ++ ++Q+P + +ILES E+ +L+ +++S+ +L ++
Sbjct: 346 KANPKDLLQLGHTLAQVPTIKAILESF----ESPHLDKLVNSIDTLPELESLIRSAIDPD 401
Query: 379 ---------------DAVMDKMKEYL--------ESTARRLNLVADKTIKLE-NSPQGFA 414
D +DK ++ + E A+ +K++ N G+
Sbjct: 402 APAVITEGSIIRTGFDETLDKYRKVMREGTSWIAEIEAKERAASGISNLKIDYNKKDGYY 461
Query: 415 YRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
+ +T + + D + T++ RF LA + + + + I V G
Sbjct: 462 FHVTNSNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAHEQSASLEYDIFMRVRGQ 521
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
Y L L+ ++ DVL S ++ + YVRP + + + RH +VE
Sbjct: 522 VERYITRLQDLAKAISTVDVLQSLAVVAEN--NHYVRPTFN--DNHEIKIEKGRHAVVEK 577
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G YIPN + F + +++ L+TGPNM GKSTY+R + ++V +AQ+G +V +S +
Sbjct: 578 VMGTQEYIPNTITFDA-DINIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVNLP 636
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
V D IFTR+GAAD G STFM+EM E IK+ + SL++ DELGRGT+T+DG +A
Sbjct: 637 VFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRSSSQSLILFDELGRGTATYDGMALA 696
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
SI + +H T+FATH+HE+ LS + NV V+ LE+ ++ L+++ G
Sbjct: 697 QSIIEYIHNHIGAKTMFATHYHELTDLSTSLTHLVNVHVATLEKNGDVTFLHKIAEGPAD 756
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+H AK+AG PE++L++A ++ E
Sbjct: 757 KSYGIHVAKIAGLPEELLQRADSILTNLE 785
>gi|433445606|ref|ZP_20409956.1| DNA mismatch repair protein MutS [Anoxybacillus flavithermus
TNO-09.006]
gi|432001020|gb|ELK21907.1| DNA mismatch repair protein MutS [Anoxybacillus flavithermus
TNO-09.006]
Length = 854
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 286/549 (52%), Gaps = 65/549 (11%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SL +LD T G RLL QW+ +PL D + I +R V L+ + R L EY LR +
Sbjct: 275 SLFWLLDETMTAMGGRLLKQWIDRPLLDREKIEQRWHFVEQLLIHYFERQELREY-LRSV 333
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------ESLVQ 355
D++ LA R+ +D ++ + + Q+P + S+L E LVQ
Sbjct: 334 YDLERLAGRVAFGNVNARDLIQLKKSLKQVPFISSLLMQIQDDHVQSFAKHLDACEELVQ 393
Query: 356 NVE-ASNLNTILSSLQSLKMMDRKDAVMDKMKEY----------LESTARRLNLVADKTI 404
+E A N LS + + D + +D+ ++ LE+ R + + K++
Sbjct: 394 LLEEAIEENPPLSVREGGIIKDGYNETLDRFRDASRNGKTWIAQLEAKEREVTGI--KSL 451
Query: 405 KLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQ 457
K+ N G+ +T L+ +DRY T+ RF L + ++++
Sbjct: 452 KIGYNRVFGYYIEVTKANLHLLPEDRYERKQTLANAERFVTKELKEKEALILEAEEKSME 511
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST----CAPK-PYVRP 512
EYE SI E+V Y L +L+ ++Q DVL F+ S C P+ Y R
Sbjct: 512 LEYELFV-SIREQV----KQYIVRLQKLAKYMSQLDVLQCFATVSEKYNYCKPQFSYDR- 565
Query: 513 CMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
LV+ Q RHP+VE + G Y+PND Y E L+TGPNM GKSTY+R
Sbjct: 566 --------RLVVRQGRHPVVEKVLGTNVYVPNDCYM-DAEREMLLITGPNMSGKSTYMRQ 616
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
I ++ +AQIGCFVP + A + + DQ+FTR+GAAD G STFM+EM E I T+
Sbjct: 617 IALTAIMAQIGCFVPAEEAVLPIFDQVFTRIGAADDLVAGQSTFMVEMLEARHAIVHATQ 676
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
NSL++ DE+GRGTST+DG +A ++ + TLF+TH+HE+ L + +P +NV
Sbjct: 677 NSLILFDEIGRGTSTYDGMALAQAMIEYIHDRIGAKTLFSTHYHELTALEQQLPRLKNVH 736
Query: 692 VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
VSA+E+ N++ L+Q+K G KSYG+H A++A P D++++A +++E+E TP
Sbjct: 737 VSAVEENGNVIFLHQIKEGPADKSYGIHVAQLAKLPLDLIQRAEQILREFE---TNATPI 793
Query: 752 GDETNNREE 760
E NRE+
Sbjct: 794 VKE--NREQ 800
>gi|289167055|ref|YP_003445322.1| DNA mismatch repair protein hexA [Streptococcus mitis B6]
gi|288906620|emb|CBJ21454.1| DNA mismatch repair protein hexA [Streptococcus mitis B6]
Length = 844
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 291/558 (52%), Gaps = 63/558 (11%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A +SL ++ + + S + SL +LD +T G RLL W+ +PL D + I+
Sbjct: 249 FLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAMGMRLLRSWIHRPLIDKERII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V + +++ R +L + +L+G+ D++ LA R+ K KD ++ +S +P++
Sbjct: 307 QRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFGKTNPKDLLQLAITLSSVPRI 365
Query: 347 ISILESLVQN-----VEASNLNTILSSLQSLKMMDRK--------------DAVMDKMKE 387
+ILE + Q+ +E + L SL S + D ++DK +
Sbjct: 366 RAILEGMEQSALTYLIEQLDGIPELESLISAAIAPEAPHVITDGGIIRTGFDEILDKYRR 425
Query: 388 YLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
L A + + K T+K++ N G+ + +T ++ + T++
Sbjct: 426 VLREGASWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSRLENVPAHFFRKATLKNS 485
Query: 439 VRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
RF + LA +AN +Y+ R I EEV + Y Q L L+
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYEIFMR--------IREEV----SKYIQRLQALA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVE-LQGGVSYIPND 544
+A DVL S ++ + + +RP G S + + + RH +VE + G +YIPN
Sbjct: 534 QGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQKGRHAVVEKVMGAQTYIPNT 588
Query: 545 VYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGA 604
+ + ++S L+TGPNM GKSTY+R + ++ +AQ+G +VP +SA + + D IFTR+GA
Sbjct: 589 IQM-AEDISIQLITGPNMSGKSTYMRQLAMTAVMAQMGSYVPAESAHLPIFDAIFTRIGA 647
Query: 605 ADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR 664
AD G STFM+EM E I T+NSL++ DELGRGT+T+DG +A SI + H
Sbjct: 648 ADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEHI 707
Query: 665 QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMA 724
TLFATH+HE+ L + NV V+ LEQ+ + L++++PG KSYG+H AK+A
Sbjct: 708 GAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKIA 767
Query: 725 GYPEDMLEQARDLMKEYE 742
G P D+L +A ++ + E
Sbjct: 768 GLPADLLARADKILTQLE 785
>gi|456369850|gb|EMF48750.1| DNA mismatch repair protein [Streptococcus parauberis KRS-02109]
Length = 851
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 188/686 (27%), Positives = 338/686 (49%), Gaps = 72/686 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +DL T +F++ + D ++++ + I+ KE L+ +
Sbjct: 139 GLAYMDLATGEFFVTALED---FASICSEILNLKAKEVLVGYD----------------- 178
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
++G++ EE L++ N L+ ++ E+ +++LL L+ Y+
Sbjct: 179 --LSGQE-----EEILVKQYNLLLSYEKEEIDDSKLLDNNLSIIEKMVASKLLAYVHHTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
D ++ + + + Y+ MS A SSL +L + + + + + SL +LD+ +T G R
Sbjct: 232 MRDLIHLQKVVHYEINDYLQMSYATKSSLDLL--ENARTGKKHGSLYWLLDQTKTAMGMR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL +A+++R + +L++N R +L + +L+G+ D++ L+ R+ K
Sbjct: 290 LLRAWIDRPLISKEAVIQRQEIIQVLLDNFIERSDLSD-SLKGVYDIERLSSRVSFGKVN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR------------ 377
KD ++ ++Q+P + +ILES+ ++ +L +++ + + ++
Sbjct: 349 PKDLLQLGHTLAQVPTIKAILESM----DSPHLEGLIAGIDPIPELEHLIQSAIDPDAPA 404
Query: 378 --------KDAVMDKMKEYLESTARRLNLVADKTIKLE------------NSPQGFAYRI 417
K ++ Y + +AD +K N G+ + +
Sbjct: 405 TISEGNIIKTGFDKQLDHYRKVMKEGTGWIADIEMKERQASGINNLKIDYNKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
T + + D + T++ R+ LA Q + E T + I ++
Sbjct: 465 TNSNLSLVPDHFFRKATLKNSERYGTMELAKIEGQMLEAREESSTLEYDIFMQLRSRVEN 524
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGG 537
Y L QL+ +A DVL S ++ Y+RP +++ RH +VE
Sbjct: 525 YIDRLQQLAKSIAAVDVLQSLAV--VAEKNHYIRPSFTDHQEINII--NGRHAVVEKVMS 580
Query: 538 VS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
V YIPN + F S E + L+TGPNM GKSTY+R + ++ +AQ+G +V D A I + D
Sbjct: 581 VKEYIPNTIQF-SQETNIQLITGPNMSGKSTYMRQLALTSIMAQLGSYVAADLAEIPIFD 639
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E IK + SL++ DELGRGT+T+DG +A SI
Sbjct: 640 AIFTRIGAADDLISGQSTFMVEMMEANQAIKGASPRSLILFDELGRGTATYDGMALAQSI 699
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ H T+FATH+HE+ LS + + NV V+ LE+ + L+++ G KSY
Sbjct: 700 IEFIHDHVGAKTMFATHYHELTDLSSRLKSLTNVHVATLEENGEVTFLHKIAQGPADKSY 759
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
G+H AK+AG P+++L++A ++++ E
Sbjct: 760 GIHVAKIAGLPKELLQRADAILQKLE 785
>gi|401406844|ref|XP_003882871.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
gi|325117287|emb|CBZ52839.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
Length = 922
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 206/687 (29%), Positives = 330/687 (48%), Gaps = 104/687 (15%)
Query: 156 KKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
K+N L +D+ L+ DDS +KN + E+ L TA +L+++ L++++ +
Sbjct: 132 KRNTADTASLHEDLATLLIEDDS-IKN-HISRELQLKTACGACAALLSHARLLSDDMYIR 189
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLP----------------QQGSTSAQTYDSL---- 255
Q ++ Y+ + +A ++L++ P + G + A SL
Sbjct: 190 QCTLEMYPLDSYLRIDNAAAAALYLFPSAQQKAQQLTLLPVSAKAGGSGASRASSLACAL 249
Query: 256 ---------LGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
++ R C + G R L M QPL D + I R+ V + + R +
Sbjct: 250 SAGGGISSVFALMSRWCTSQLGSRRLFTCMSQPLVDREKIERRYDIVELFQTDEAFRRQV 309
Query: 306 HEYALRGLPDMQSLAMRIGR--------------KKAG---------------LKDC--- 333
+ + D+ LA R R +K G L DC
Sbjct: 310 FCSHFKHVFDLDRLAGRFHRLASSTKDLDANEAPRKKGSIFARVKLTLEDLVKLYDCAVE 369
Query: 334 -------YRVYEGVSQ-----------------LPKLISILESLVQNVEASNLNTILSSL 369
R Y GV + I+++E + EA ++S
Sbjct: 370 CTSLEAALRGYSGVHRDALAKAFSEPLAEIVKSFATFINLVEFTIDMDEAKRGVFVISRR 429
Query: 370 ---QSLKMMDRKDAVMDKMKEYLESTARRLNLVADK----TIKL-ENSPQGFAYRITMKL 421
+ ++D+K+ + +M+ + + K +KL E++ GF R+T K
Sbjct: 430 FEPELAALLDKKEDLRRRMERERQKAEDEIPFSGRKRDAEIVKLIEDNTMGFVLRVTKKD 489
Query: 422 NNSI---DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGY 478
++ RY + + F L +++ + YE Q+S+VE+ + ++A Y
Sbjct: 490 QPAVLGARGRYHQVRLNKSEFIFTTAELRGLCREFKDVSEAYEEMQKSLVEKALLVAASY 549
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQ-GG 537
+ +L+++L DVL +F+ A+ AP PYVRP + +G LVL RHP++E+Q G
Sbjct: 550 WPLVERLAELLGMLDVLGAFAAAANAAPIPYVRPKIVEDESG-LVLKASRHPLLEIQPGS 608
Query: 538 VSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQ 597
S+I NDV+ + ++TGPNMGGKSTYIR + ++V LAQ+G FVPCDS + + Q
Sbjct: 609 SSFISNDVHLDPTQ-RLIIITGPNMGGKSTYIRQVALAVLLAQMGSFVPCDSCQLPIFKQ 667
Query: 598 IFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIA 657
+ RVGA+D Q RG+STF+ EM E + +++ SLV+IDELGRGTST++GFG+A +IA
Sbjct: 668 VICRVGASDIQLRGVSTFLAEMVEASAILRNADTKSLVVIDELGRGTSTYEGFGLAWAIA 727
Query: 658 RELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL--EQEDNLVLLYQVKPGSCVKS 715
+ LAS + LFATHFHE+ LS + NV VSA ++ L LY+++PG +S
Sbjct: 728 KHLASEVKCLCLFATHFHEMGQLSEEVHGVSNVHVSAAVNKETQQLAFLYRLEPGCIDQS 787
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE 742
YGVH A AG P ++E+AR E E
Sbjct: 788 YGVHVASFAGLPASVVERARKKSAELE 814
>gi|418113400|ref|ZP_12750396.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41538]
gi|353781611|gb|EHD62052.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41538]
Length = 844
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 323/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREVTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P D+L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-NQGTESPA 793
>gi|24380425|ref|NP_722380.1| DNA mismatch repair protein MutS [Streptococcus mutans UA159]
gi|449983731|ref|ZP_21818602.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM2]
gi|450081136|ref|ZP_21851541.1| DNA mismatch repair protein MutS [Streptococcus mutans N66]
gi|450181402|ref|ZP_21887810.1| DNA mismatch repair protein MutS [Streptococcus mutans 24]
gi|44888210|sp|Q8DRW8.1|MUTS_STRMU RecName: Full=DNA mismatch repair protein MutS
gi|24378451|gb|AAN59686.1|AE015031_2 DNA mismatch repair protein [Streptococcus mutans UA159]
gi|449180987|gb|EMB83119.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM2]
gi|449215613|gb|EMC15795.1| DNA mismatch repair protein MutS [Streptococcus mutans N66]
gi|449246526|gb|EMC44828.1| DNA mismatch repair protein MutS [Streptococcus mutans 24]
Length = 849
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 197/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKTREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E ++ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEDQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|15903929|ref|NP_359479.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae R6]
gi|182685013|ref|YP_001836760.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae CGSP14]
gi|15459581|gb|AAL00690.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae R6]
gi|182630347|gb|ACB91295.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae CGSP14]
Length = 857
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 182 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 241
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 242 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 299
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 300 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 358
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 359 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 418
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 419 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 478
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 479 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 530
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 531 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 581
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 582 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 640
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 641 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 700
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 701 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 760
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 761 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 798
>gi|419780651|ref|ZP_14306494.1| DNA mismatch repair protein MutS [Streptococcus oralis SK100]
gi|383185027|gb|EIC77530.1| DNA mismatch repair protein MutS [Streptococcus oralis SK100]
Length = 844
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 322/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDIHLLDPRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGVEQPALAYLIEQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNSIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAIMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLKNLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P ++L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPAELLSRADKILTQLE-NQGTESPA 793
>gi|419460909|ref|ZP_14000832.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA02270]
gi|419489817|ref|ZP_14029563.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44386]
gi|379529203|gb|EHY94453.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA02270]
gi|379585129|gb|EHZ49988.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44386]
Length = 831
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 156 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 215
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 216 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 273
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 274 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 332
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 333 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 392
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 393 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 452
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 453 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 504
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 505 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 555
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 556 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 614
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 615 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 674
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 675 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 734
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 735 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 772
>gi|419467737|ref|ZP_14007615.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA05248]
gi|419513461|ref|ZP_14053091.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA05578]
gi|419517665|ref|ZP_14057277.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA02506]
gi|421284213|ref|ZP_15734995.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA04216]
gi|379542159|gb|EHZ07317.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA05248]
gi|379632748|gb|EHZ97318.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA05578]
gi|379637315|gb|EIA01871.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA02506]
gi|395879227|gb|EJG90287.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA04216]
Length = 844
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 323/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P D+L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-NQGTESPA 793
>gi|300769726|ref|ZP_07079609.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308181084|ref|YP_003925212.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|418275815|ref|ZP_12891138.1| DNA mismatch repair protein MutS/HexA [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821800|ref|YP_007414962.1| DNA mismatch repair protein MutS [Lactobacillus plantarum ZJ316]
gi|300492769|gb|EFK27954.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046575|gb|ADN99118.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|376009366|gb|EHS82695.1| DNA mismatch repair protein MutS/HexA [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448275297|gb|AGE39816.1| DNA mismatch repair protein MutS [Lactobacillus plantarum ZJ316]
Length = 896
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 282/546 (51%), Gaps = 58/546 (10%)
Query: 234 VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVN 293
+M S+ +QG+ LL +LD +T G RLL QW+ +PL I R V
Sbjct: 266 LMKSIRTGKKQGT--------LLWLLDETKTAMGGRLLKQWIDRPLIVKADIETRQNKVA 317
Query: 294 ILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL 353
L+++ R NL E L + D++ LA R+ +D ++ + Q+PK+ IL L
Sbjct: 318 TLLDHYFERSNLQE-ELTKVYDLERLAGRVAFGSVNGRDLVQLKTSLRQIPKIRYILSEL 376
Query: 354 ---VQNVEASNLNTI--LSSLQSLKMMDR-----------KDAVMDKMKEYLESTARRLN 397
V N E + L+ + ++ L +++ KD +++ +Y ++
Sbjct: 377 DTQVFNDEVNQLDPVEDVADLIDAAIVEDAPLSVTDGGVIKDGYNEQLDQYRDAMNNGKK 436
Query: 398 LVAD------KTIKLENSPQGF----AYRITMKLNNSID---DRYTILDTVRGGVRFQDD 444
+A+ T ++N GF Y I + N DRY T+ RF
Sbjct: 437 WIAELEAQERATTGIKNLKIGFNRVFGYYIEVTKANLAQLPKDRYERKQTLTNAERFSTP 496
Query: 445 RLATANTQYQAIQREYETHQQSI-------VEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
L + ++++ E E+H + V E + + Q L L+ +A DVL S
Sbjct: 497 ELKS----HESLILEAESHSTDLEYQLFTKVRETVKKA---IQRLQTLAKAVAAIDVLQS 549
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNL 556
F++ S +VRP K + L + RHP+VE + G SY+PN+V E L
Sbjct: 550 FAVVS--EDYHFVRP--KLTKSHDLKIVDGRHPVVEKVMGNQSYVPNNVTMSPDETVL-L 604
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + ++V +AQIGCFVP SA + + DQIFTR+GA D G STFM
Sbjct: 605 ITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTFM 664
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM+E ++ T NSLV+ DE+GRGT+T+DG +A +I + +H TLF+TH+HE
Sbjct: 665 VEMQEANNALQHATANSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYHE 724
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ L + + RNV V A EQ+ LV L++V+PG+ KSYGVH AK+AG P +LE+A
Sbjct: 725 LTALDQELSGLRNVHVGATEQDGELVFLHKVEPGAADKSYGVHVAKLAGMPTSLLERANK 784
Query: 737 LMKEYE 742
++ E
Sbjct: 785 ILTSLE 790
>gi|284108785|ref|ZP_06386450.1| DNA mismatch repair protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829859|gb|EFC34150.1| DNA mismatch repair protein [Candidatus Poribacteria sp. WGA-A3]
Length = 874
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 195/691 (28%), Positives = 342/691 (49%), Gaps = 61/691 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +DL T +F + E + D + +++ P+E L+P + +K++ L +
Sbjct: 146 GLASIDLSTGQFLIAEFTEQDLMLDE---LIRLGPQEVLIPEQTDTIALDKLLAPLRLPR 202
Query: 150 VCMTGRKKNEF-SEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
V E + ++ +Q V F L PE A C+ + YL+
Sbjct: 203 VTPQPSAHFELHASQEFLQ-----VHFGVDRPDVLGLSPEGPGVQAGGCI---LRYLK-- 252
Query: 209 NNEDNMNQFSIHS---IDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+ + I ++ ++ +H+ + M +L ++ Q Q + +LL ILD+ T
Sbjct: 253 QTQPTLEHHHIQKPELLEPTREMHLDAMTMRNLELV--QTLNPDQEHATLLSILDQTVTA 310
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL QW+ +PL D ++I R AV+ ++N + R+++ + L+ L D++ L+ RI
Sbjct: 311 MGSRLLRQWVVRPLIDNESIQRRLNAVSTFLDNLKLRLHVRSF-LKDLHDLERLSSRIVI 369
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNT--ILSSLQSLK---------- 373
A +D R+ E ++ LPKL+ + + + + S L +LS + +L
Sbjct: 370 GTATPRDVLRLKESLTILPKLVQLFDGIADPLLNSLLQRWDVLSDVTALIEDSIDPNAPA 429
Query: 374 -------MMDRKDAVMDKMKEY----------LESTARRLNLVADKTIKLENSPQGFAYR 416
+ D V+D+++ LE R + + IK N G+ +
Sbjct: 430 SVKEGPIFQNGVDPVIDELRTMSRNGVQWLTDLEQREREQSGIDSLKIKY-NQVFGYYFE 488
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T+ R+ L Q + +Q + ++ +
Sbjct: 489 VTKANLSRVPEYFRRKQTLVNAERYTTQDLEGIEAQLSGANEKLRRAEQERFQTMLQTLS 548
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE--- 533
G+ + +++ +A DVL +F A A YV+P M G + + RHP+VE
Sbjct: 549 GHVFRIQKMAKHVALMDVLSNF--AEVAARNRYVKPDMH--DGGIICIKNGRHPVVEQFD 604
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
L G +IPND Y L+TGPNM GKST++R G+ V +A +GCFVP A I
Sbjct: 605 LPEG--FIPNDSYLDFDAHRLLLLTGPNMAGKSTFLRQTGLIVLMAHMGCFVPASEAKIG 662
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
V+D++FTRVGA+D+ G+STFM+EM ETA +++ T SL+++DE+GRGTST+DG +A
Sbjct: 663 VIDRLFTRVGASDNLALGLSTFMVEMLETAKILRGATSRSLILLDEIGRGTSTYDGLSLA 722
Query: 654 CSIARELASHR--QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGS 711
+IA + R TLFATH+HE+ L +N+ V+ E++D+++ L ++ G
Sbjct: 723 WAIAEHIQDRRILGARTLFATHYHEMTELETFREGVQNLTVAVKEEKDDVIFLRKITQGK 782
Query: 712 CVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+SYG+H K+AG P ++ +A++++ + E
Sbjct: 783 ATRSYGIHVGKLAGLPSTLIARAQEVLAQLE 813
>gi|380033021|ref|YP_004890012.1| DNA mismatch repair protein MutS/HexA [Lactobacillus plantarum
WCFS1]
gi|38258029|sp|Q88UZ7.1|MUTS_LACPL RecName: Full=DNA mismatch repair protein MutS
gi|342242264|emb|CCC79498.1| DNA mismatch repair protein MutS/HexA [Lactobacillus plantarum
WCFS1]
Length = 896
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 282/546 (51%), Gaps = 58/546 (10%)
Query: 234 VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVN 293
+M S+ +QG+ LL +LD +T G RLL QW+ +PL I R V
Sbjct: 266 LMKSIRTGKKQGT--------LLWLLDETKTAMGGRLLKQWIDRPLIVKADIETRQNKVA 317
Query: 294 ILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL 353
L+++ R NL E L + D++ LA R+ +D ++ + Q+PK+ IL L
Sbjct: 318 TLLDHYFERSNLQE-ELTKVYDLERLAGRVAFGSVNGRDLVQLKTSLRQIPKIRYILSEL 376
Query: 354 ---VQNVEASNLNTI--LSSLQSLKMMDR-----------KDAVMDKMKEYLESTARRLN 397
V N E + L+ + ++ L +++ KD +++ +Y ++
Sbjct: 377 DTQVFNDEVNQLDPVEDVADLIDAAIVEDAPLSVTDGGVIKDGYNEQLDQYRDAMNNGKK 436
Query: 398 LVAD------KTIKLENSPQGF----AYRITMKLNNSID---DRYTILDTVRGGVRFQDD 444
+A+ T ++N GF Y I + N DRY T+ RF
Sbjct: 437 WIAELEAQERATTGIKNLKIGFNRVFGYYIEVTKANLAQLPKDRYERKQTLTNAERFSTP 496
Query: 445 RLATANTQYQAIQREYETHQQSI-------VEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
L + ++++ E E+H + V E + + Q L L+ +A DVL S
Sbjct: 497 ELKS----HESLILEAESHSTDLEYQLFTKVRETVKKA---IQRLQTLAKAVAAIDVLQS 549
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNL 556
F++ S +VRP K + L + RHP+VE + G SY+PN+V E L
Sbjct: 550 FAVVS--EDYHFVRP--KLTKSHDLKIVDGRHPVVEKVMGNQSYVPNNVTMSPDETVL-L 604
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + ++V +AQIGCFVP SA + + DQIFTR+GA D G STFM
Sbjct: 605 ITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTFM 664
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM+E ++ T NSLV+ DE+GRGT+T+DG +A +I + +H TLF+TH+HE
Sbjct: 665 VEMQEANNALQHATANSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYHE 724
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ L + + RNV V A EQ+ LV L++V+PG+ KSYGVH AK+AG P +LE+A
Sbjct: 725 LTALDQELSGLRNVHVGATEQDGELVFLHKVEPGAADKSYGVHVAKLAGMPTSLLERANK 784
Query: 737 LMKEYE 742
++ E
Sbjct: 785 ILTSLE 790
>gi|409407051|ref|ZP_11255502.1| DNA mismatch repair protein [Herbaspirillum sp. GW103]
gi|386432802|gb|EIJ45628.1| DNA mismatch repair protein [Herbaspirillum sp. GW103]
Length = 893
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 274/536 (51%), Gaps = 48/536 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L LD CRT G RLL W+ L+D RHAA+N L+ T+A L L +
Sbjct: 303 TLFSTLDHCRTAMGSRLLRHWLHHALRDQQVARARHAAINALMR-TDACSGL-SATLAAV 360
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS-- 371
PD++ + RI A +D + G+ QL L + +E ++ EA L + L +
Sbjct: 361 PDIERITTRIALLSARPRDLAGLRSGLQQLGSLRAYVEMCARDAEAPLLGQLHEDLATPA 420
Query: 372 --LKMMDRK-------------------DAVMDKMK-------EYL-ESTARRLNLVADK 402
L +++R DA +D+++ +YL E AR
Sbjct: 421 ECLDLLERAIMLEPAAMVRDGGVIARGYDAELDELRGLSENAGQYLLELEARERERTGIA 480
Query: 403 TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+++E N GF +T + + + Y T++ R+ L + + Q
Sbjct: 481 NLRVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSL 540
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST----CAPKPYVRPCMKPM 517
+ ++ + E+++ + L ++ LAQ D LV+ + + CAP+ PC++
Sbjct: 541 SREKFLYEQLLNDMGVHIVRLQSIAHALAQLDTLVALADHAVRNNWCAPQLVEEPCIQ-- 598
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
++Q RHP+VE Q +I ND + E L+TGPNMGGKST++R + +
Sbjct: 599 ------IDQGRHPVVENQIE-RFIANDCQL-AAERKLLLITGPNMGGKSTFMRQVALITL 650
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA +G FVP SA I +D+IFTR+GAAD G STFM+EM E+A+++ TE+SLV++
Sbjct: 651 LAYVGSFVPATSAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESASILNNATEHSLVLM 710
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTSTFDG +A +IAR L + FTLFATH+ E+ L + PT NV +SA+E
Sbjct: 711 DEVGRGTSTFDGLALAWAIARHLIDVTRSFTLFATHYFELTQLPDLHPTAANVHLSAVEH 770
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+D++V L+ V+ G +SYG+ A++AG P ++ AR + E TP D
Sbjct: 771 KDSIVFLHAVQSGPASQSYGLQVAQLAGVPAAVIRAARKHLSALESQSMQPTPQFD 826
>gi|419531177|ref|ZP_14070700.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA40028]
gi|379570005|gb|EHZ34970.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA40028]
Length = 835
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|418108694|ref|ZP_12745727.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41410]
gi|421232765|ref|ZP_15689402.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2080076]
gi|421239407|ref|ZP_15695968.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2071247]
gi|353775151|gb|EHD55632.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41410]
gi|395593294|gb|EJG53543.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2080076]
gi|395599541|gb|EJG59706.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2071247]
Length = 717
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 42 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 101
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 102 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 159
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 160 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 218
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 219 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 278
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 279 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 338
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 339 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 390
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 391 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 441
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 442 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 500
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 501 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 560
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 561 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 620
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 621 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 658
>gi|418133526|ref|ZP_12770393.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11304]
gi|353804020|gb|EHD84307.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11304]
Length = 835
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQTLAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|418079522|ref|ZP_12716741.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 4027-06]
gi|418111054|ref|ZP_12748070.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA49447]
gi|418144257|ref|ZP_12781056.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13494]
gi|418149421|ref|ZP_12786180.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13856]
gi|418203313|ref|ZP_12839737.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA52306]
gi|418239596|ref|ZP_12866143.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419432472|ref|ZP_13972597.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP05]
gi|419441269|ref|ZP_13981309.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA40410]
gi|419454301|ref|ZP_13994268.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP03]
gi|419463211|ref|ZP_14003111.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA02714]
gi|419469879|ref|ZP_14009743.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA06083]
gi|419515575|ref|ZP_14055197.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
England14-9]
gi|419526809|ref|ZP_14066361.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA14373]
gi|421267055|ref|ZP_15717932.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPAR27]
gi|421282065|ref|ZP_15732858.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA04672]
gi|421286384|ref|ZP_15737156.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA60190]
gi|421292890|ref|ZP_15743621.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA56348]
gi|421299543|ref|ZP_15750226.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA60080]
gi|421310482|ref|ZP_15761104.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA62681]
gi|353745265|gb|EHD25935.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 4027-06]
gi|353780720|gb|EHD61176.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA49447]
gi|353808892|gb|EHD89155.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13494]
gi|353810223|gb|EHD90475.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13856]
gi|353865506|gb|EHE45414.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA52306]
gi|353891146|gb|EHE70903.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379529248|gb|EHY94497.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA02714]
gi|379542589|gb|EHZ07744.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA06083]
gi|379555806|gb|EHZ20870.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA14373]
gi|379575926|gb|EHZ40855.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA40410]
gi|379622439|gb|EHZ87074.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP03]
gi|379626505|gb|EHZ91122.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP05]
gi|379633891|gb|EHZ98457.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
England14-9]
gi|395865440|gb|EJG76579.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPAR27]
gi|395878512|gb|EJG89575.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA04672]
gi|395884840|gb|EJG95874.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA60190]
gi|395891138|gb|EJH02140.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA56348]
gi|395898063|gb|EJH09010.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA60080]
gi|395908097|gb|EJH18980.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA62681]
Length = 835
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|259502855|ref|ZP_05745757.1| DNA mismatch repair protein HexA [Lactobacillus antri DSM 16041]
gi|259169222|gb|EEW53717.1| DNA mismatch repair protein HexA [Lactobacillus antri DSM 16041]
Length = 873
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 279/542 (51%), Gaps = 51/542 (9%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L +LD +T G RLL +W+ +PL D AI ER V L+++ R NL E
Sbjct: 263 SGKRQGTLSWLLDETKTAMGSRLLKRWLDRPLIDPAAIKERQDKVAELLDHYFERSNLQE 322
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
++ + D++ LA R+ +D ++ + Q+PK+ +LE+L V A +L + L
Sbjct: 323 ELIK-VYDLERLAGRVAYGSVNGRDLIQLKTSLEQVPKIKYVLETLDSPVFA-DLTSRLD 380
Query: 368 SLQSLK-MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTI 404
L + ++D+ KD D++ +Y ++ +AD +
Sbjct: 381 PLADIADLIDQAIVEEPPIAVTDGGVIKDGYNDQLDQYRDAMNNGKQWIADLQEQERQVT 440
Query: 405 KLENSPQG----FAYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATA-----NTQ 452
+ N G F Y I + L+ DRY T+ RF L Q
Sbjct: 441 GINNLKIGYNHVFGYFIEVTKVNLDKIPRDRYERKQTLVNAERFSTPELKEKEALILGAQ 500
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
+++ EY+ + I E+V G Q L +L+ L++ DVL SF++ S +VRP
Sbjct: 501 EKSVALEYDLFVK-IREQV----KGQIQRLQKLAQALSELDVLQSFAVVSEDYH--FVRP 553
Query: 513 CMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
M L + RHP+VE G Y+PNDV + L+TGPNM GKSTY+R
Sbjct: 554 VMN--SGHQLQIKDGRHPVVEKFMGHQEYVPNDVQM-GDDTDILLITGPNMSGKSTYMRQ 610
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
+ ++ +AQ+GCFVP A + + DQIFTR+GAAD G STFM+EM E + T+
Sbjct: 611 LALTAVMAQMGCFVPASRAELPIFDQIFTRIGAADDLISGESTFMVEMMEANNALSHATD 670
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
SL++ DE+GRGT+T+DG +A +I + H + TLF+TH+HE+ L +P +NV
Sbjct: 671 RSLILFDEIGRGTATYDGMALAQAIIEYVHQHVRAKTLFSTHYHELTSLEETLPRLKNVH 730
Query: 692 VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY---EYSLDTK 748
V A E+ LV L++V G KSYG+H AK+AG P +L++A ++++ E +L K
Sbjct: 731 VGATEKNGELVFLHKVSAGPADKSYGIHVAKLAGMPAPLLKRADQILQKLESKEAALPKK 790
Query: 749 TP 750
TP
Sbjct: 791 TP 792
>gi|419483089|ref|ZP_14022872.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA40563]
gi|379577621|gb|EHZ42539.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA40563]
Length = 835
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREESANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|421228303|ref|ZP_15684999.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2072047]
gi|395592711|gb|EJG52969.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2072047]
Length = 717
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 42 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 101
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 102 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 159
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 160 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 218
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 219 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 278
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 279 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 338
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 339 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 390
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 391 IREEV----GKYIQRLQTLAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 441
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 442 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 500
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 501 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 560
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 561 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 620
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 621 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 658
>gi|421207579|ref|ZP_15664624.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2090008]
gi|421243843|ref|ZP_15700353.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2081074]
gi|395572251|gb|EJG32849.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2090008]
gi|395605769|gb|EJG65883.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2081074]
Length = 702
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 27 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 86
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 87 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 144
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 145 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 203
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 204 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 263
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 264 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 323
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 324 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 375
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 376 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 426
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 427 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 485
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 486 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 545
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 546 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 605
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 606 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 643
>gi|322392638|ref|ZP_08066098.1| DNA mismatch repair protein HexA [Streptococcus peroris ATCC
700780]
gi|321144630|gb|EFX40031.1| DNA mismatch repair protein HexA [Streptococcus peroris ATCC
700780]
Length = 844
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 287/558 (51%), Gaps = 63/558 (11%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A +SL ++ + + S + SL +LD +T G RLL W+++PL D D I+
Sbjct: 249 FLQMDYATKTSLDLV--ENARSGKKQGSLFWLLDETKTAMGMRLLRSWIQRPLIDKDRIL 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER V + ++ R +L E +L+G+ D++ LA R+ K+ KD ++ + +P++
Sbjct: 307 ERQEVVQVFLDYFFERSDLTE-SLKGVYDIERLASRVSFGKSNPKDLLQLATTLGSVPRI 365
Query: 347 ISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--------------DAVMDKMKE 387
+ILE + Q A L+ I L SL S + D +DK +
Sbjct: 366 RAILEGIEQPALAYLIEQLDAIPELESLISAAIAPEAPHVITEGGIIRTGFDETLDKYRR 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
L E T + A + T+K++ N G+ + +T ++ + T++
Sbjct: 426 VLREGTGWIAEIEAKERENSGIHTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNS 485
Query: 439 VRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
RF + LA +AN +Y+ R I EEV Y Q L L+
Sbjct: 486 ERFGTEELAHIEGEMLEAREKSANLEYEIFMR--------IREEV----GKYIQRLQPLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVE-LQGGVSYIPND 544
+A DVL ++ + + +RP G S + + + RH +VE + G +YIPN
Sbjct: 534 QGIATVDVLQGLAVVAEN--QHLIRP---EFGQDSKIDIQKGRHAVVEKVMGAQTYIPNS 588
Query: 545 VYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGA 604
+ E S L+TGPNM GKSTY+R + ++ +AQ+G +VP +SA + + D IFTR+GA
Sbjct: 589 IQMDE-ETSIQLITGPNMSGKSTYMRQLAITAVMAQMGSYVPAESAYLPIFDAIFTRIGA 647
Query: 605 ADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR 664
AD G STFM+EM E I T+NSL++ DELGRGT+T+DG +A SI + H
Sbjct: 648 ADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEHI 707
Query: 665 QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMA 724
TLFATH+HE+ L + NV V+ LEQ + L++++PG KSYG+H AK+A
Sbjct: 708 GAKTLFATHYHELTSLEASLEHLVNVHVATLEQNGQVTFLHKIEPGPADKSYGIHVAKIA 767
Query: 725 GYPEDMLEQARDLMKEYE 742
G P D+L++A ++ + E
Sbjct: 768 GLPADLLKRADAILTQLE 785
>gi|293364382|ref|ZP_06611108.1| DNA mismatch repair protein HexA [Streptococcus oralis ATCC 35037]
gi|307702653|ref|ZP_07639605.1| DNA mismatch repair protein MutS [Streptococcus oralis ATCC 35037]
gi|291317228|gb|EFE57655.1| DNA mismatch repair protein HexA [Streptococcus oralis ATCC 35037]
gi|307623769|gb|EFO02754.1| DNA mismatch repair protein MutS [Streptococcus oralis ATCC 35037]
Length = 844
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 322/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDPRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGEDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAITAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQNGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG PE++L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPEELLARADKILTQLE-NQGTESPA 793
>gi|149023772|ref|ZP_01836233.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP23-BS72]
gi|421209777|ref|ZP_15666786.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070005]
gi|147929568|gb|EDK80561.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP23-BS72]
gi|395571947|gb|EJG32548.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070005]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLRYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|421225924|ref|ZP_15682658.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070768]
gi|395588012|gb|EJG48347.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070768]
Length = 717
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 42 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLRYVH 101
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 102 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 159
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 160 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 218
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 219 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 278
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 279 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 338
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 339 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 390
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 391 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 441
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 442 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 500
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 501 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 560
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 561 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 620
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 621 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 658
>gi|392949281|ref|ZP_10314866.1| DNA mismatch repair protein MutS/HexA [Lactobacillus pentosus KCA1]
gi|392435490|gb|EIW13429.1| DNA mismatch repair protein MutS/HexA [Lactobacillus pentosus KCA1]
Length = 912
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 279/547 (51%), Gaps = 60/547 (10%)
Query: 234 VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVN 293
+M S+ +QG+ LL +LD +T G RLL QW+ +PL D I R V
Sbjct: 266 LMKSIRTGKKQGT--------LLWLLDETKTAMGGRLLKQWIDRPLIVQDDITTRQNKVA 317
Query: 294 ILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL---ISIL 350
L+++ R NL E ++ + D++ LA R+ +D ++ + Q+PK+ +S L
Sbjct: 318 ALLDHYFERSNLQEELVK-VYDLERLAGRVAFGSVNGRDLIQLKTSLRQIPKIRYILSEL 376
Query: 351 ESLVQNVEASNLNTI----------LSSLQSLKMMDR---KDAVMDKMKEY--------- 388
++ V N E + L+ + + L + D KD ++ +Y
Sbjct: 377 DTQVFNDEVNQLDPVEDVADLIEEAIVEDAPLSVTDGGVIKDGYNQQLDQYRDAMNNGKK 436
Query: 389 ----LESTARRLNLVADKTIKLENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQD 443
LE+ R + + I N G+ +T L DRY T+ RF
Sbjct: 437 WIAALEAQEREATGIKNLKIGF-NRVFGYYIEVTKANLAQLPADRYERKQTLTNAERFST 495
Query: 444 DRLATANTQYQAIQREYETHQQSI-------VEEVIGISAGYTQTLNQLSDVLAQFDVLV 496
L +++++ E E+H + V E + + Q L L+ +A DVL
Sbjct: 496 PELK----EHESLILEAESHSTDLEYQLFTTVRETVKKA---IQRLQTLAKAVAAIDVLQ 548
Query: 497 SFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFN 555
SF++ S +VRP + L + RHP+VE + G SY+PNDV E
Sbjct: 549 SFAVVS--EDYHFVRPTL--TNDHDLKIVDGRHPVVEKVMGNQSYVPNDVTMAPDETVL- 603
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
L+TGPNM GKSTY+R + ++V +AQIGCFVP SA + + DQIFTR+GA D G STF
Sbjct: 604 LITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTF 663
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M+EM+E ++ T NSLV+ DE+GRGT+T+DG +A +I + +H TLF+TH+H
Sbjct: 664 MVEMQEANNALQHATANSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYH 723
Query: 676 EIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
E+ L + + RNV V A EQ LV L++V+PG+ KSYGVH AK+AG P+ +L +A
Sbjct: 724 ELTALDQELSGLRNVHVGATEQNGELVFLHKVEPGAADKSYGVHVAKLAGMPDSLLTRAN 783
Query: 736 DLMKEYE 742
++ E
Sbjct: 784 KILTSLE 790
>gi|417923013|ref|ZP_12566488.1| DNA mismatch repair protein MutS [Streptococcus mitis SK569]
gi|342837366|gb|EGU71559.1| DNA mismatch repair protein MutS [Streptococcus mitis SK569]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 184/637 (28%), Positives = 313/637 (49%), Gaps = 61/637 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDIHLLDSRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + I++R V + +++ R +L + L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTD-GLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L L S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDGIPELEGLISAAITPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I EEV + Y Q L L+ +A DVL S ++ + + +RP + + + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRPEFR--DDSRIDIQK 569
Query: 527 CRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RH +VE + G +YIPN + ++S L+TGPNM GKSTY+R + ++ +AQ+G +V
Sbjct: 570 GRHAVVEKVMGAQTYIPNTIQMAE-DISIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYV 628
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT+
Sbjct: 629 PAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTA 688
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L+
Sbjct: 689 TYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLINVHVATLEQDGQVTFLH 748
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 749 KIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|315612291|ref|ZP_07887205.1| DNA mismatch repair protein MutS [Streptococcus sanguinis ATCC
49296]
gi|315315684|gb|EFU63722.1| DNA mismatch repair protein MutS [Streptococcus sanguinis ATCC
49296]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 322/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N L+ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLLLSYEKEGFEDIHLLDPRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + I++R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIKQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNSIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQNGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG PE++L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPEELLARADKILTQLE-NQGTESPA 793
>gi|168486892|ref|ZP_02711400.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
CDC1087-00]
gi|418185832|ref|ZP_12822368.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47283]
gi|419511257|ref|ZP_14050895.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP141]
gi|421214049|ref|ZP_15671000.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070108]
gi|421216134|ref|ZP_15673053.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070109]
gi|183570158|gb|EDT90686.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
CDC1087-00]
gi|353847270|gb|EHE27296.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47283]
gi|379630337|gb|EHZ94923.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP141]
gi|395578235|gb|EJG38759.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070108]
gi|395579139|gb|EJG39644.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070109]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|449981704|ref|ZP_21817909.1| DNA mismatch repair protein MutS [Streptococcus mutans 5SM3]
gi|449175600|gb|EMB78006.1| DNA mismatch repair protein MutS [Streptococcus mutans 5SM3]
Length = 849
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 334/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKAREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDCPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|418103804|ref|ZP_12740872.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP070]
gi|419476465|ref|ZP_14016296.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA14688]
gi|419487613|ref|ZP_14027372.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44128]
gi|353773367|gb|EHD53864.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP070]
gi|379557181|gb|EHZ22227.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA14688]
gi|379584505|gb|EHZ49371.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44128]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLRYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDVIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|418160815|ref|ZP_12797511.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17227]
gi|353820080|gb|EHE00268.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17227]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|418190311|ref|ZP_12826820.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47373]
gi|419524712|ref|ZP_14064281.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13723]
gi|421290640|ref|ZP_15741387.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA54354]
gi|421306033|ref|ZP_15756684.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA62331]
gi|353851570|gb|EHE31561.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47373]
gi|379554936|gb|EHZ20008.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13723]
gi|395885544|gb|EJG96566.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA54354]
gi|395903717|gb|EJH14640.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA62331]
Length = 835
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|306828748|ref|ZP_07461940.1| DNA mismatch repair protein MutS [Streptococcus mitis ATCC 6249]
gi|304428926|gb|EFM32014.1| DNA mismatch repair protein MutS [Streptococcus mitis ATCC 6249]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 296/567 (52%), Gaps = 64/567 (11%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A +SL ++ + + S + SL +LD +T G RLL W+ +PL D + IV
Sbjct: 249 FLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAMGMRLLRSWIHRPLIDKERIV 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V + +++ R +L + +L+G+ D++ LA R+ K KD ++ +S +P++
Sbjct: 307 QRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFGKTNPKDLLQLATTLSSVPRI 365
Query: 347 ISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--------------DAVMDKMKE 387
+ILE + Q A + L+ I L SL S + D +DK +
Sbjct: 366 RAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHVITEGGIIRTGFDETLDKYRR 425
Query: 388 YLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
L + + K T+K++ N G+ + +T ++ + T++
Sbjct: 426 VLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNS 485
Query: 439 VRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
RF + LA +AN +Y+ R I EEV + Y Q L L+
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYEIFMR--------IREEV----SKYIQRLQALA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVE-LQGGVSYIPND 544
+A DVL S ++ + + +RP G S + + + RH +VE + G +YIPN
Sbjct: 534 QGIATVDVLQSLAVVAET--QHLIRP---EFGEDSQIDIQKGRHAVVEKVMGAQTYIPNS 588
Query: 545 VYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGA 604
+ + + S L+TGPNM GKSTY+R + ++ +AQ+G +VP +SA + + D IFTR+GA
Sbjct: 589 IQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGA 647
Query: 605 ADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR 664
AD G STFM+EM E I T++SL++ DELGRGT+T+DG +A SI + H
Sbjct: 648 ADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGTATYDGMALAQSIIEYIHEHI 707
Query: 665 QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMA 724
TLFATH+HE+ L ++ NV V+ LEQ+ + L++++PG KSYG+H AK+A
Sbjct: 708 GAKTLFATHYHELTSLESILKNLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKIA 767
Query: 725 GYPEDMLEQARDLMKEYEYSLDTKTPS 751
G P ++L +A ++ + E + T++P+
Sbjct: 768 GLPAELLARADKILTQLE-NQGTESPA 793
>gi|168491603|ref|ZP_02715746.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
CDC0288-04]
gi|307128338|ref|YP_003880369.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 670-6B]
gi|418194625|ref|ZP_12831111.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47439]
gi|183574029|gb|EDT94557.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
CDC0288-04]
gi|251766525|gb|ACC61791.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|306485400|gb|ADM92269.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 670-6B]
gi|353854764|gb|EHE34735.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47439]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQTLAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|421234923|ref|ZP_15691538.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2061617]
gi|421250338|ref|ZP_15706790.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2082239]
gi|395599300|gb|EJG59473.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2061617]
gi|395612455|gb|EJG72496.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2082239]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQTLAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|417687534|ref|ZP_12336801.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41301]
gi|418201128|ref|ZP_12837567.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47976]
gi|419522030|ref|ZP_14061621.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA05245]
gi|421269247|ref|ZP_15720110.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPAR95]
gi|332071344|gb|EGI81838.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41301]
gi|353862561|gb|EHE42492.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47976]
gi|379536017|gb|EHZ01208.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA05245]
gi|395866369|gb|EJG77499.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPAR95]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|111657151|ref|ZP_01407932.1| hypothetical protein SpneT_02001631 [Streptococcus pneumoniae
TIGR4]
gi|116515831|ref|YP_817292.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae D39]
gi|148989894|ref|ZP_01821177.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP6-BS73]
gi|148998130|ref|ZP_01825643.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP11-BS70]
gi|149002904|ref|ZP_01827815.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP14-BS69]
gi|149006958|ref|ZP_01830639.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP18-BS74]
gi|149011933|ref|ZP_01833081.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP19-BS75]
gi|168484415|ref|ZP_02709367.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
CDC1873-00]
gi|168494170|ref|ZP_02718313.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
CDC3059-06]
gi|168577109|ref|ZP_02722929.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae MLV-016]
gi|221232788|ref|YP_002511942.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae ATCC
700669]
gi|225855565|ref|YP_002737077.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae JJA]
gi|225857650|ref|YP_002739161.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae P1031]
gi|225859833|ref|YP_002741343.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 70585]
gi|237650273|ref|ZP_04524525.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974]
gi|237822221|ref|ZP_04598066.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974M2]
gi|303259578|ref|ZP_07345554.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae
SP-BS293]
gi|303262023|ref|ZP_07347968.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae
SP14-BS292]
gi|303264479|ref|ZP_07350398.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae BS397]
gi|303267398|ref|ZP_07353254.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae BS457]
gi|303269757|ref|ZP_07355508.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae BS458]
gi|307068689|ref|YP_003877655.1| mismatch repair ATPase [Streptococcus pneumoniae AP200]
gi|387760161|ref|YP_006067139.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae INV200]
gi|410477415|ref|YP_006744174.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae
gamPNI0373]
gi|415700922|ref|ZP_11458265.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 459-5]
gi|415748022|ref|ZP_11476288.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SV35]
gi|415753275|ref|ZP_11480257.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SV36]
gi|417677785|ref|ZP_12327188.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17545]
gi|417697254|ref|ZP_12346429.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47368]
gi|417699460|ref|ZP_12348628.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41317]
gi|418074923|ref|ZP_12712169.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11184]
gi|418081723|ref|ZP_12718929.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 6735-05]
gi|418086355|ref|ZP_12723528.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47033]
gi|418090445|ref|ZP_12727595.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA43265]
gi|418092683|ref|ZP_12729820.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44452]
gi|418097204|ref|ZP_12734309.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16531]
gi|418099409|ref|ZP_12736502.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 6901-05]
gi|418106198|ref|ZP_12743249.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44500]
gi|418113605|ref|ZP_12750599.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 5787-06]
gi|418117755|ref|ZP_12754721.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 6963-05]
gi|418122136|ref|ZP_12759076.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44194]
gi|418124438|ref|ZP_12761365.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44378]
gi|418128974|ref|ZP_12765863.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP170]
gi|418131234|ref|ZP_12768114.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA07643]
gi|418135849|ref|ZP_12772699.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11426]
gi|418138176|ref|ZP_12775010.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11663]
gi|418140413|ref|ZP_12777234.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13338]
gi|418156038|ref|ZP_12792760.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16242]
gi|418163114|ref|ZP_12799792.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17328]
gi|418167728|ref|ZP_12804378.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17971]
gi|418170190|ref|ZP_12806827.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19077]
gi|418174500|ref|ZP_12811107.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41277]
gi|418176873|ref|ZP_12813461.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41437]
gi|418179203|ref|ZP_12815781.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41565]
gi|418181439|ref|ZP_12818004.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41688]
gi|418188065|ref|ZP_12824583.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47360]
gi|418217528|ref|ZP_12844204.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
Netherlands15B-37]
gi|418219797|ref|ZP_12846459.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP127]
gi|418222117|ref|ZP_12848766.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47751]
gi|418226433|ref|ZP_12853057.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP112]
gi|418230899|ref|ZP_12857494.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP01]
gi|419424059|ref|ZP_13964267.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA43264]
gi|419434697|ref|ZP_13974811.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA40183]
gi|419456329|ref|ZP_13996283.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP04]
gi|419458615|ref|ZP_13998554.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA02254]
gi|419465508|ref|ZP_14005396.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA04175]
gi|419471957|ref|ZP_14011813.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA07914]
gi|419474154|ref|ZP_14013999.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13430]
gi|419478724|ref|ZP_14018543.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA18068]
gi|419498450|ref|ZP_14038152.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47522]
gi|419504799|ref|ZP_14044462.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47760]
gi|419506950|ref|ZP_14046608.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA49194]
gi|419535567|ref|ZP_14075061.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17457]
gi|421211923|ref|ZP_15668901.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070035]
gi|421230631|ref|ZP_15687290.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2061376]
gi|421245907|ref|ZP_15702403.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2081685]
gi|421248248|ref|ZP_15704722.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2082170]
gi|421271501|ref|ZP_15722351.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPAR48]
gi|421273748|ref|ZP_15724585.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPAR55]
gi|421297090|ref|ZP_15747793.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA58581]
gi|421312839|ref|ZP_15763436.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA58981]
gi|421314933|ref|ZP_15765517.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47562]
gi|444388920|ref|ZP_21186878.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
PCS125219]
gi|444391227|ref|ZP_21189140.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
PCS70012]
gi|444393833|ref|ZP_21191451.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
PCS81218]
gi|444395966|ref|ZP_21193503.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0002]
gi|444398360|ref|ZP_21195842.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0006]
gi|444400827|ref|ZP_21198181.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0007]
gi|444403487|ref|ZP_21200576.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0008]
gi|444406114|ref|ZP_21202912.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0009]
gi|444407976|ref|ZP_21204643.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0010]
gi|444411224|ref|ZP_21207678.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0076]
gi|444412375|ref|ZP_21208696.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0153]
gi|444416314|ref|ZP_21212468.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0199]
gi|444418866|ref|ZP_21214811.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0360]
gi|444421275|ref|ZP_21217019.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0427]
gi|444423963|ref|ZP_21219513.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0446]
gi|61225741|sp|P0A3R3.1|HEXA_STRPN RecName: Full=DNA mismatch repair protein HexA
gi|61225742|sp|P0A3R4.1|HEXA_STRR6 RecName: Full=DNA mismatch repair protein HexA
gi|122277862|sp|Q04I96.1|MUTS_STRP2 RecName: Full=DNA mismatch repair protein MutS
gi|254766639|sp|C1CAQ5.1|MUTS_STRP7 RecName: Full=DNA mismatch repair protein MutS
gi|254766640|sp|B8ZPK0.1|MUTS_STRPJ RecName: Full=DNA mismatch repair protein MutS
gi|254766642|sp|C1CH06.1|MUTS_STRZJ RecName: Full=DNA mismatch repair protein MutS
gi|254766643|sp|C1CN23.1|MUTS_STRZP RecName: Full=DNA mismatch repair protein MutS
gi|153655|gb|AAA88597.1| mismatch repair protein [Streptococcus pneumoniae]
gi|116076407|gb|ABJ54127.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae D39]
gi|133950199|gb|ABO44015.1| MutS [Streptococcus pneumoniae]
gi|147756140|gb|EDK63183.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP11-BS70]
gi|147758907|gb|EDK65902.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP14-BS69]
gi|147761559|gb|EDK68524.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP18-BS74]
gi|147763888|gb|EDK70821.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP19-BS75]
gi|147924679|gb|EDK75764.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP6-BS73]
gi|172042346|gb|EDT50392.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
CDC1873-00]
gi|183575846|gb|EDT96374.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
CDC3059-06]
gi|183577255|gb|EDT97783.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae MLV-016]
gi|220675250|emb|CAR69841.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae ATCC
700669]
gi|225720589|gb|ACO16443.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 70585]
gi|225722884|gb|ACO18737.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae JJA]
gi|225724726|gb|ACO20578.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae P1031]
gi|251766517|gb|ACC61788.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|301802750|emb|CBW35522.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae INV200]
gi|302636663|gb|EFL67153.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae
SP14-BS292]
gi|302639130|gb|EFL69589.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae
SP-BS293]
gi|302640704|gb|EFL71100.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae BS458]
gi|302643063|gb|EFL73354.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae BS457]
gi|302645849|gb|EFL76077.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae BS397]
gi|306410226|gb|ADM85653.1| Mismatch repair ATPase (MutS family) [Streptococcus pneumoniae
AP200]
gi|332071146|gb|EGI81641.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17545]
gi|332198497|gb|EGJ12580.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41317]
gi|332198681|gb|EGJ12763.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47368]
gi|353745097|gb|EHD25768.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11184]
gi|353750045|gb|EHD30687.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 6735-05]
gi|353759445|gb|EHD40029.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA43265]
gi|353760414|gb|EHD40991.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47033]
gi|353761829|gb|EHD42393.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44452]
gi|353765827|gb|EHD46368.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16531]
gi|353767629|gb|EHD48161.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 6901-05]
gi|353774488|gb|EHD54977.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44500]
gi|353786956|gb|EHD67365.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 6963-05]
gi|353789508|gb|EHD69902.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 5787-06]
gi|353790465|gb|EHD70847.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44194]
gi|353794050|gb|EHD74408.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44378]
gi|353797024|gb|EHD77361.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP170]
gi|353800649|gb|EHD80958.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA07643]
gi|353819509|gb|EHD99705.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16242]
gi|353825249|gb|EHE05414.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17328]
gi|353827472|gb|EHE07623.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17971]
gi|353832644|gb|EHE12760.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19077]
gi|353835024|gb|EHE15119.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41277]
gi|353840187|gb|EHE20259.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41437]
gi|353840957|gb|EHE21017.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41565]
gi|353841155|gb|EHE21212.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA41688]
gi|353847874|gb|EHE27893.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47360]
gi|353868766|gb|EHE48650.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
Netherlands15B-37]
gi|353872096|gb|EHE51963.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP127]
gi|353872512|gb|EHE52376.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47751]
gi|353879073|gb|EHE58900.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae NP112]
gi|353884410|gb|EHE64209.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP01]
gi|353899533|gb|EHE75102.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11663]
gi|353899957|gb|EHE75520.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11426]
gi|353904259|gb|EHE79736.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13338]
gi|379528611|gb|EHY93865.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA02254]
gi|379535634|gb|EHZ00832.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA04175]
gi|379543346|gb|EHZ08496.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA07914]
gi|379549223|gb|EHZ14333.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13430]
gi|379561707|gb|EHZ26722.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17457]
gi|379562996|gb|EHZ28001.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA18068]
gi|379574939|gb|EHZ39876.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA40183]
gi|379584481|gb|EHZ49349.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA43264]
gi|379597514|gb|EHZ62312.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47522]
gi|379603985|gb|EHZ68747.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47760]
gi|379604397|gb|EHZ69156.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA49194]
gi|379626292|gb|EHZ90910.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP04]
gi|381308922|gb|EIC49765.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SV36]
gi|381313437|gb|EIC54221.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 459-5]
gi|381319501|gb|EIC60201.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SV35]
gi|395571614|gb|EJG32225.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070035]
gi|395592640|gb|EJG52899.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2061376]
gi|395606444|gb|EJG66549.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2081685]
gi|395612109|gb|EJG72154.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2082170]
gi|395865640|gb|EJG76778.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPAR48]
gi|395872085|gb|EJG83185.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPAR55]
gi|395892664|gb|EJH03654.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA58581]
gi|395907591|gb|EJH18481.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA58981]
gi|395911517|gb|EJH22382.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47562]
gi|406370360|gb|AFS44050.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae
gamPNI0373]
gi|444247603|gb|ELU54143.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
PCS125219]
gi|444255385|gb|ELU61741.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
PCS70012]
gi|444255528|gb|ELU61879.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
PCS81218]
gi|444255638|gb|ELU61984.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0002]
gi|444259089|gb|ELU65405.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0006]
gi|444264257|gb|ELU70357.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0008]
gi|444265134|gb|ELU71161.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0007]
gi|444270182|gb|ELU75968.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0009]
gi|444271572|gb|ELU77323.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0010]
gi|444274337|gb|ELU79984.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0153]
gi|444274958|gb|ELU80593.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0076]
gi|444277575|gb|ELU83078.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0199]
gi|444279773|gb|ELU85159.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0360]
gi|444282868|gb|ELU88099.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0427]
gi|444285811|gb|ELU90833.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PNI0446]
Length = 844
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|418158429|ref|ZP_12795140.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16833]
gi|353820505|gb|EHE00689.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16833]
Length = 717
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 42 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 101
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 102 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 159
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 160 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 218
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 219 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 278
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 279 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 338
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 339 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 390
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 391 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 441
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 442 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 500
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 501 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 560
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 561 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 620
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 621 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 658
>gi|449999923|ref|ZP_21824798.1| DNA mismatch repair protein MutS [Streptococcus mutans N29]
gi|449186343|gb|EMB88178.1| DNA mismatch repair protein MutS [Streptococcus mutans N29]
Length = 849
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 186/627 (29%), Positives = 314/627 (50%), Gaps = 41/627 (6%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 169 KARELVIGFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GTRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL------------ 372
KA KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 346 KANPKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPIT 405
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ +
Sbjct: 406 ITEGGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFH 463
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + D + T++ RF LA + + E + I +
Sbjct: 464 VTNSNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVE 523
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQ 535
Y + L L+ LA DVL S ++ + YVRP + + RH +VE +
Sbjct: 524 SYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVM 579
Query: 536 GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
G YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + +
Sbjct: 580 GSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIF 638
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +
Sbjct: 639 DAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQA 698
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + TLFATH+HE+ LS + NV V+ LE++ + L+++ G KS
Sbjct: 699 IIEYIHNKVGAKTLFATHYHELTDLSTRLTRLVNVHVATLEKDGEVTFLHKIADGPADKS 758
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE 742
YG+H AK+AG P+D+L +A ++ + E
Sbjct: 759 YGIHVAKIAGLPKDLLNRADHILVDLE 785
>gi|421295155|ref|ZP_15745873.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA56113]
gi|421300333|ref|ZP_15751004.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19998]
gi|395891512|gb|EJH02507.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA56113]
gi|395899757|gb|EJH10696.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19998]
Length = 835
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|385263093|ref|ZP_10041187.1| DNA mismatch repair protein MutS [Streptococcus sp. SK643]
gi|385188631|gb|EIF36109.1| DNA mismatch repair protein MutS [Streptococcus sp. SK643]
Length = 844
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL + L+ Y+
Sbjct: 169 KAREVVLGYDLSEAEEQILSRQMNLVLSYEKESFEDLHLLDSRLASVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D IVER V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKKRIVERQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMKQPALAYLIAQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERESSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQAYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESACLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQNGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|387789117|ref|YP_006254185.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae ST556]
gi|418117966|ref|ZP_12754929.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA18523]
gi|418165391|ref|ZP_12802053.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17371]
gi|418172231|ref|ZP_12808848.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19451]
gi|418196741|ref|ZP_12833212.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47688]
gi|418198930|ref|ZP_12835382.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47778]
gi|419426031|ref|ZP_13966222.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7533-05]
gi|419428139|ref|ZP_13968316.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 5652-06]
gi|419445598|ref|ZP_13985609.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19923]
gi|419447754|ref|ZP_13987755.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7879-04]
gi|419449862|ref|ZP_13989855.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 4075-00]
gi|419452004|ref|ZP_13991984.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP02]
gi|419519796|ref|ZP_14059399.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA08825]
gi|421288484|ref|ZP_15739242.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA58771]
gi|353793414|gb|EHD73778.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA18523]
gi|353827171|gb|EHE07324.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17371]
gi|353833434|gb|EHE13544.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19451]
gi|353858773|gb|EHE38732.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47688]
gi|353859345|gb|EHE39296.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47778]
gi|379138859|gb|AFC95650.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae ST556]
gi|379569418|gb|EHZ34388.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19923]
gi|379611494|gb|EHZ76217.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7879-04]
gi|379616015|gb|EHZ80715.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 5652-06]
gi|379616437|gb|EHZ81132.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7533-05]
gi|379620806|gb|EHZ85456.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 4075-00]
gi|379621223|gb|EHZ85871.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP02]
gi|379637950|gb|EIA02496.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA08825]
gi|395885116|gb|EJG96143.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA58771]
Length = 835
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|334882032|emb|CCB82982.1| DNA mismatch repair protein mutS [Lactobacillus pentosus MP-10]
Length = 910
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 278/547 (50%), Gaps = 60/547 (10%)
Query: 234 VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVN 293
+M S+ +QG+ LL +LD +T G RLL QW+ +PL D I R V
Sbjct: 266 LMKSIRTGKKQGT--------LLWLLDETKTAMGGRLLKQWIDRPLIVQDDIKTRQNKVA 317
Query: 294 ILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL 353
L+++ R NL E ++ + D++ LA R+ +D ++ + Q+PK+ IL L
Sbjct: 318 ALLDHYFERSNLQEELVK-VYDLERLAGRVAFGSVNGRDLIQLKTSLRQIPKIRYILSEL 376
Query: 354 ---VQNVEASNLNTI----------LSSLQSLKMMDR---KDAVMDKMKEY--------- 388
V N E + L+ + + L + D KD ++ +Y
Sbjct: 377 DTQVFNDEVNQLDPVEDVADLIEEAIVEDAPLSVTDGGVIKDGYNQQLDQYRDAMNNGKK 436
Query: 389 ----LESTARRLNLVADKTIKLENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQD 443
LE+ R + + I N G+ +T L DRY T+ RF
Sbjct: 437 WIAALEAQEREATGIKNLKIGF-NRVFGYYIEVTKANLAQLPADRYERKQTLTNAERFST 495
Query: 444 DRLATANTQYQAIQREYETHQQSI-------VEEVIGISAGYTQTLNQLSDVLAQFDVLV 496
L +++++ E E+H + V E + + Q L L+ +A DVL
Sbjct: 496 PELK----EHESLILEAESHSTDLEYQLFTTVRETVKKA---IQRLQTLAKAVAAIDVLQ 548
Query: 497 SFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFN 555
SF++ S +VRP + L + RHP+VE + G SY+PNDV E
Sbjct: 549 SFAVVS--EDYHFVRPTL--TKDHDLKIVDGRHPVVEKVMGNQSYVPNDVTMAPDETVL- 603
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
L+TGPNM GKSTY+R + ++V +AQIGCFVP SA + + DQIFTR+GA D G STF
Sbjct: 604 LITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTF 663
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M+EM+E ++ T NSLV+ DE+GRGT+T+DG +A +I + +H TLF+TH+H
Sbjct: 664 MVEMQEANNALQHATANSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYH 723
Query: 676 EIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
E+ L + + RNV V A EQ LV L++V+PG+ KSYGVH AK+AG P+ +L++A
Sbjct: 724 ELTALDQELSGLRNVHVGATEQNGELVFLHKVEPGAADKSYGVHVAKLAGMPDSLLKRAN 783
Query: 736 DLMKEYE 742
++ E
Sbjct: 784 KILTSLE 790
>gi|339639233|emb|CCC18468.1| DNA mismatch repair protein mutS [Lactobacillus pentosus IG1]
Length = 910
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 280/547 (51%), Gaps = 60/547 (10%)
Query: 234 VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVN 293
+M S+ +QG+ LL +LD +T G RLL QW+ +PL D I R V
Sbjct: 266 LMKSIRTGKKQGT--------LLWLLDETKTAMGGRLLKQWIDRPLIVQDDIKTRQNKVA 317
Query: 294 ILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL---ISIL 350
L+++ R NL E ++ + D++ LA R+ +D ++ + Q+PK+ +S L
Sbjct: 318 ALLDHYFERSNLQEELVK-VYDLERLAGRVAFGSVNGRDLIQLKTSLRQIPKIRYILSEL 376
Query: 351 ESLVQNVEASNLNTI----------LSSLQSLKMMDR---KDAVMDKMKEY--------- 388
++ V N E + L+ + + L + D KD ++ +Y
Sbjct: 377 DTQVFNDEVNQLDPVEDVADLIEEAIVEDAPLSVTDGGVIKDGYNQQLDQYRDAMNNGKK 436
Query: 389 ----LESTARRLNLVADKTIKLENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQD 443
LE+ R + + I N G+ +T L DRY T+ RF
Sbjct: 437 WIAALEAQEREATGIKNLKIGF-NRVFGYYIEVTKANLAQLPADRYERKQTLTNAERFST 495
Query: 444 DRLATANTQYQAIQREYETHQQSI-------VEEVIGISAGYTQTLNQLSDVLAQFDVLV 496
L +++++ E E+H + V E + + Q L L+ +A DVL
Sbjct: 496 PELK----EHESLILEAESHSTDLEYQLFTTVRETVKKA---IQRLQTLAKAVAAIDVLQ 548
Query: 497 SFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFN 555
SF++ S +VRP + L + RHP+VE + G SY+PNDV E
Sbjct: 549 SFAVVS--EDYHFVRPTL--TKDHDLKIVDGRHPVVEKVMGNQSYVPNDVTMAPDETVL- 603
Query: 556 LVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTF 615
L+TGPNM GKSTY+R + ++V +AQIGCFVP SA + + DQIFTR+GA D G STF
Sbjct: 604 LITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTF 663
Query: 616 MMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFH 675
M+EM+E ++ T NSLV+ DE+GRGT+T+DG +A +I + +H TLF+TH+H
Sbjct: 664 MVEMQEANNALQHATANSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYH 723
Query: 676 EIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
E+ L + + RNV V A EQ LV L++V+PG+ KSYGVH AK+AG P+ +L++A
Sbjct: 724 ELTALDQELSGLRNVHVGATEQNGELVFLHKVEPGAADKSYGVHVAKLAGMPDSLLKRAN 783
Query: 736 DLMKEYE 742
++ E
Sbjct: 784 KILTSLE 790
>gi|169832918|ref|YP_001695440.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
Hungary19A-6]
gi|419494197|ref|ZP_14033919.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47210]
gi|238688314|sp|B1I9E5.1|MUTS_STRPI RecName: Full=DNA mismatch repair protein MutS
gi|168995420|gb|ACA36032.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
Hungary19A-6]
gi|379591459|gb|EHZ56283.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47210]
Length = 844
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQTLAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|417937045|ref|ZP_12580351.1| DNA mismatch repair protein MutS [Streptococcus infantis X]
gi|343399487|gb|EGV12009.1| DNA mismatch repair protein MutS [Streptococcus infantis X]
Length = 844
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 312/638 (48%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVIGYNLSEAEEQILSCQMNLVLSYEQETYEDVHLLDSRLATVEGAASGKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELSHLKPVIRYEIKDFLQMDFATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+++PL DLD I+ER V + ++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIQRPLIDLDRIIERQEVVQVFLDYFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K+ KD ++ + +P++ +ILE + Q A L+ I L +L S +
Sbjct: 346 KSNPKDLLQLATTLGSVPRIRAILEGMEQPALAYLIEQLDAIPELENLISAAIAPEAPHL 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDDTLDKYRRVLREGTSWIAEIEAKERENSGINTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL ++ + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQGLAV--VAEKQHLIRP---EFGQESRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 NGRHAVVEKVMGAQTYIPNSIQMDE-DTSIQLITGPNMSGKSTYMRQLAITAVMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESARLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAINHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLEASLEHLVNVHVATLEQNGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L++A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLKRADAILTQLE 785
>gi|358465299|ref|ZP_09175249.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 058
str. F0407]
gi|357065794|gb|EHI75969.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 058
str. F0407]
Length = 844
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 185/631 (29%), Positives = 318/631 (50%), Gaps = 49/631 (7%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEAEEQILSRQMNLVLSYEKESFEDIHLLDSRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLITQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYETHQQSIVEEVIG 473
++ + T++ RF + LA + ++ + EYE + I EEV
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSAKLEYEIFMR-IREEV-- 522
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIV 532
+ Y Q L L+ +A DVL S ++ + + +RP G S + + + RH +V
Sbjct: 523 --SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGENSRIDIQKGRHAVV 575
Query: 533 E-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSAT 591
E + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +VP +SA
Sbjct: 576 EKVMGAQTYIPNSIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAH 634
Query: 592 ISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFG 651
+ + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT+T+DG
Sbjct: 635 LPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGTATYDGMA 694
Query: 652 MACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGS 711
+A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L++++PG
Sbjct: 695 LAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGP 754
Query: 712 CVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+H AK+AG P ++L +A ++ + E
Sbjct: 755 ADKSYGIHVAKIAGLPAELLARADKILAQLE 785
>gi|422760023|ref|ZP_16813785.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322412858|gb|EFY03766.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 851
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 312/628 (49%), Gaps = 46/628 (7%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQMILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFSSPYIDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESASLEYDIFMRIRTQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVS-YIPNDV 545
LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KNLATIDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVKEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F E S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-ETSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVNLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ +ENSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASENSLILFDELGRGTATYDGMALAQAIIEHIHDRIG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + NV V LE+ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTMFATHYHELTELSTKLTRLINVHVETLEKGGDVTFLHKIAQGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYEYSLDTKTPSGD 753
PE +L +A ++ +E ++PS D
Sbjct: 769 LPESLLNRADTVLTRFE----AQSPSTD 792
>gi|254557089|ref|YP_003063506.1| DNA mismatch repair protein MutS [Lactobacillus plantarum JDM1]
gi|254046016|gb|ACT62809.1| DNA mismatch repair protein [Lactobacillus plantarum JDM1]
Length = 896
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 282/546 (51%), Gaps = 58/546 (10%)
Query: 234 VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVN 293
+M S+ +QG+ LL +LD +T G RLL QW+ +PL I R V
Sbjct: 266 LMKSIRTGKKQGT--------LLWLLDETKTAMGGRLLKQWIDRPLIVKADIETRQNKVA 317
Query: 294 ILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL 353
L+++ R NL E L + D++ LA R+ +D ++ + Q+PK+ IL L
Sbjct: 318 TLLDHYFERSNLQE-ELTKVYDLERLAGRVAFGSVNGRDLVQLKTSLRQIPKIRYILSEL 376
Query: 354 ---VQNVEASNLNTI--LSSLQSLKMMDR-----------KDAVMDKMKEYLESTARRLN 397
V N E + L+ + ++ L +++ KD +++ +Y ++
Sbjct: 377 DTQVFNDEVNQLDPVEDVADLIDAAIVEDAPLSVTDGGVIKDGYNEQLDQYRDAMNNGKK 436
Query: 398 LVAD------KTIKLENSPQGF----AYRITMKLNNSID---DRYTILDTVRGGVRFQDD 444
+A+ T ++N GF Y I + N DRY T+ RF
Sbjct: 437 WIAELEAQERATTGIKNLKIGFNRVFGYYIEVTKANLAQLPKDRYERKQTLTNAERFSTP 496
Query: 445 RLATANTQYQAIQREYETHQQSI-------VEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
L + ++++ E E+H + V E + + Q L L+ +A DVL S
Sbjct: 497 ELKS----HESLILEAESHSTDLEYQLFTKVRETVKKA---IQRLQTLAKAVAAIDVLQS 549
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNL 556
F++ S +VRP K + L + RHP+VE + G SY+PN+V E L
Sbjct: 550 FAVVS--EDYHFVRP--KLTKSHDLKIVDGRHPVVEKVMGNQSYVPNNVTMSPDETVL-L 604
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + ++V +AQIGCFVP SA + + DQIFTR+GA D G STFM
Sbjct: 605 ITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTFM 664
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM+E ++ T NSLV+ DE+GRGT+T+DG +A +I + +H TLF+TH+HE
Sbjct: 665 VEMQEANNALQHATVNSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYHE 724
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ L + + RNV V A EQ+ LV L++V+PG+ KSYGVH AK+AG P +LE+A
Sbjct: 725 LTALDQELSGLRNVHVGATEQDGELVFLHKVEPGAADKSYGVHVAKLAGMPTSLLERANK 784
Query: 737 LMKEYE 742
++ E
Sbjct: 785 ILTSLE 790
>gi|421241542|ref|ZP_15698084.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2080913]
gi|395606203|gb|EJG66311.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2080913]
Length = 844
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLRYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|390934967|ref|YP_006392472.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570468|gb|AFK86873.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 857
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 189/697 (27%), Positives = 352/697 (50%), Gaps = 74/697 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ VD+ T + ++ +I + + I++ SP E + +++ K++ IL +K
Sbjct: 137 GLSFVDVLTGELFVTQITKCNDIRKIYDEIMRYSPSEIIANSDFFE--LKKLIKILHSSK 194
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V + +K + ED++ + R L ++ L + ++SL + L +
Sbjct: 195 VFINKYEKVLNNAEDVITG------------QFHRSLKDLKLERKKYAIKSLASVLLYLK 242
Query: 210 NEDNMNQFSIHSIDY---SKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ ++++ Y + ++ + + + +L ++ +++ +LL +LD+ TP
Sbjct: 243 EMQKVELSQLNNLIYYEDNSFMLLDNNTIRNLEIIYSINRDHSKS-GTLLSVLDQTVTPM 301
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL +W+++PL D++ I R +V+ L N+ + R ++ + L+G+ D++ L+ ++ +
Sbjct: 302 GGRLLKRWLEEPLIDVEKINYRLDSVSELYNDYKGRSDIRD-ILKGIYDLERLSSKLVYQ 360
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRKDAVMDKMK 386
KD + + +LPKL + L+ ++ L I + L +L+ D D + +K
Sbjct: 361 NINAKDLLSIKISIERLPKL----KQLLNKYNSNYLKEIFTKLDTLQ--DIHDLIDKSIK 414
Query: 387 EYLESTARRLNLVAD---------------------------------KTIKLE-NSPQG 412
+ S + N++ D KT+K+ N G
Sbjct: 415 DDPSSNVKEGNIIKDGFDKNIDELRRASIDGKSWIANLEAYEKEKTGIKTLKIGYNKVFG 474
Query: 413 FAYRITMKLNNSIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSI 467
+ ++ +S+ + Y T+ R+ +D + + ++ EYE SI
Sbjct: 475 YYIEVSKSYISSVPENYIRKQTLANAERYITPELKDIEEKILGAETKLVELEYEIFD-SI 533
Query: 468 VEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQC 527
E++ + S +A DVLVS +A+ YV+P + G+ +V+
Sbjct: 534 REQI----KNEIYRIQMTSRHIAILDVLVS--LATVAETNNYVKPVVN--GSDRIVIKDG 585
Query: 528 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
RHP++E S+I ND+ G+ ++TGPNM GKSTY+R + + V +AQIG FVP
Sbjct: 586 RHPVIETIMDDSFISNDIEI-DGKKPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPA 644
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
A I VVD+IFTRVGA+D + G STFM+EM E + ++ T+NSL+I+DE+GRGTST+
Sbjct: 645 SYAEIGVVDRIFTRVGASDDLFSGQSTFMVEMNEVSLILNSATKNSLIILDEVGRGTSTY 704
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +AC+I + + T+FATH+HE+ L + +N +S E +D ++ L ++
Sbjct: 705 DGMSIACAILEYIHDKIKAKTMFATHYHELTNLEDKLDGIKNYNISVEETDDEIIFLRKI 764
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
PG+ KSYG+ AK+AG P+++++ A+ ++ E S
Sbjct: 765 IPGAADKSYGIQVAKLAGLPDEVVQNAKKILNNLENS 801
>gi|421308282|ref|ZP_15758920.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA60132]
gi|395905085|gb|EJH15991.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA60132]
Length = 835
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDAIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|418183617|ref|ZP_12820171.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA43380]
gi|353846635|gb|EHE26663.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA43380]
Length = 835
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIVQRQKVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPVHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|225861895|ref|YP_002743404.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230664|ref|ZP_06964345.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254472|ref|ZP_06978058.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298501576|ref|YP_003723516.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A]
gi|417313537|ref|ZP_12100246.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA04375]
gi|418083897|ref|ZP_12721089.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44288]
gi|418086061|ref|ZP_12723236.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47281]
gi|418094876|ref|ZP_12731999.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA49138]
gi|418101555|ref|ZP_12738634.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7286-06]
gi|418142609|ref|ZP_12779417.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13455]
gi|418151584|ref|ZP_12788326.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA14798]
gi|418153852|ref|ZP_12790586.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16121]
gi|418224288|ref|ZP_12850923.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 5185-06]
gi|418228575|ref|ZP_12855188.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 3063-00]
gi|419429042|ref|ZP_13969210.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11856]
gi|419436891|ref|ZP_13976972.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 8190-05]
gi|419439055|ref|ZP_13979120.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13499]
gi|419492000|ref|ZP_14031731.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47179]
gi|419502739|ref|ZP_14042417.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47628]
gi|419529044|ref|ZP_14068581.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17719]
gi|419533270|ref|ZP_14072782.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47794]
gi|421275926|ref|ZP_15726752.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA52612]
gi|254766644|sp|C1CTY2.1|MUTS_STRZT RecName: Full=DNA mismatch repair protein MutS
gi|225727079|gb|ACO22930.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
Taiwan19F-14]
gi|251766523|gb|ACT16085.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|298237171|gb|ADI68302.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A]
gi|327388813|gb|EGE87161.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA04375]
gi|353753421|gb|EHD34044.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44288]
gi|353754901|gb|EHD35511.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47281]
gi|353762413|gb|EHD42972.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA49138]
gi|353768654|gb|EHD49177.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7286-06]
gi|353803731|gb|EHD84022.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13455]
gi|353811907|gb|EHD92143.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA14798]
gi|353815178|gb|EHD95398.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16121]
gi|353876820|gb|EHE56665.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 5185-06]
gi|353878884|gb|EHE58712.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 3063-00]
gi|379535812|gb|EHZ01008.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13499]
gi|379551888|gb|EHZ16980.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA11856]
gi|379562688|gb|EHZ27697.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17719]
gi|379591081|gb|EHZ55910.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47179]
gi|379597954|gb|EHZ62749.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47628]
gi|379604173|gb|EHZ68934.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47794]
gi|379611178|gb|EHZ75905.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 8190-05]
gi|395871680|gb|EJG82782.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA52612]
Length = 844
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|421303752|ref|ZP_15754413.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17484]
gi|395898169|gb|EJH09114.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17484]
Length = 835
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 318/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL + L+ Y+
Sbjct: 160 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLASVEQAASSKLLQYVH 219
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 220 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 277
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + I++R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 278 GMRLLRSWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 336
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 337 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDGIPELESLISAAIAPEAPHV 396
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +DK + L E T + A + T+K++ N G+ + +T
Sbjct: 397 ITDGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 456
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 457 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 508
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 509 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 559
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 560 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 618
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 619 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 678
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 679 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 738
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 739 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 776
>gi|303254066|ref|ZP_07340182.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455]
gi|302598976|gb|EFL66006.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
+P +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 IPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|148992081|ref|ZP_01821855.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP9-BS68]
gi|168489138|ref|ZP_02713337.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SP195]
gi|417680045|ref|ZP_12329438.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17570]
gi|418126712|ref|ZP_12763614.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44511]
gi|418192506|ref|ZP_12829005.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47388]
gi|418215266|ref|ZP_12841997.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA54644]
gi|418235261|ref|ZP_12861834.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA08780]
gi|419485280|ref|ZP_14025051.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA43257]
gi|421221261|ref|ZP_15678092.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070425]
gi|421223398|ref|ZP_15680176.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070531]
gi|421279837|ref|ZP_15730640.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17301]
gi|147929130|gb|EDK80141.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP9-BS68]
gi|183572226|gb|EDT92754.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SP195]
gi|251766519|gb|ACC61789.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|251766521|gb|ACC61790.1| DNA mismatch repair protein [Streptococcus pneumoniae]
gi|332071510|gb|EGI82003.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17570]
gi|353794248|gb|EHD74605.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA44511]
gi|353854340|gb|EHE34318.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47388]
gi|353867556|gb|EHE47447.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA54644]
gi|353884984|gb|EHE64774.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA08780]
gi|379580053|gb|EHZ44948.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA43257]
gi|395584249|gb|EJG44642.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070425]
gi|395586256|gb|EJG46631.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070531]
gi|395877065|gb|EJG88135.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17301]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|427439507|ref|ZP_18924162.1| DNA mismatch repair protein MutS [Pediococcus lolii NGRI 0510Q]
gi|425788343|dbj|GAC44950.1| DNA mismatch repair protein MutS [Pediococcus lolii NGRI 0510Q]
Length = 894
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 308/599 (51%), Gaps = 60/599 (10%)
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV--LP 242
L+ ++ A ++ L+ Y+++ + + + + S Y+ M A +L + L
Sbjct: 213 LIQDLTSPIAVQVVKQLLMYVQVTQKRNLAHMQKAIAYEPSFYLRMDHASKYNLELTRLI 272
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ G +LL +LD +T G RLL QW+ +PL DAI R + V +L+ + R
Sbjct: 273 RTGKKQG----TLLWLLDETKTAMGGRLLKQWLDRPLIRKDAINARQSRVQVLLEHFFER 328
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNL 362
NL E L + D++ LA R+ +D ++ + Q+PK+ +L L V L
Sbjct: 329 SNLQE-ELTKVYDLERLAGRVAFGNVNGRDLIQLKTSLLQIPKIRHVLAELDDPVFDEAL 387
Query: 363 NTI--LSSLQSL--KMMDR------------KDAVMDKMKEYLESTARRLNLVAD----- 401
+ +S + L +D KD K+ EY ++ +AD
Sbjct: 388 TRLDPVSEIADLIEAAIDEDAPISVTEGNVIKDGYNPKLDEYRDAMRNGKKWIADLQAQE 447
Query: 402 -KTIKLENSPQG----FAYRITM---KLNNSIDDRYTILDTVRGGVRF------QDDRLA 447
+ ++N G F Y I + L + + RY T+ RF + +R+
Sbjct: 448 RQATGIKNLKIGYNKVFGYYIEVTRANLASVPEGRYERKQTLTNAERFITPELKEKERII 507
Query: 448 TANTQYQAIQREYETHQ---QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
Q ++ EYE + ++I E++ + L L+ +A+ DVL SF++ S
Sbjct: 508 LEAEQ-KSTDLEYELFKKIRETIKEQI--------ERLQNLAKQVAELDVLQSFAVVS-- 556
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
+V+P M + + + RHP+VE + G SY+PND+ + L+TGPNM
Sbjct: 557 EEYQFVKPTMTE--SHEIEIKAGRHPVVEKVMGHQSYVPNDILMNQ-DTEILLITGPNMS 613
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + ++V +AQ+GCFVP + AT+ + DQIFTR+GAAD G STFM+EM+E
Sbjct: 614 GKSTYMRQLALTVIMAQMGCFVPAEEATLPIFDQIFTRIGAADDLISGQSTFMVEMQEAN 673
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
+K T NSL++ DE+GRGT+T+DG +A SI + + TLF+TH+HE+ L +
Sbjct: 674 RALKDGTANSLILFDEIGRGTATYDGMALAQSIIEFIHQNVHAKTLFSTHYHELTALDQT 733
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ +NV V A+EQ+ NLV L++++ G KSYG+H AK+AG P+ +L +A ++++ E
Sbjct: 734 LTRLKNVHVGAVEQDGNLVFLHKMEDGPADKSYGIHVAKLAGMPDSLLARASVILEQLE 792
>gi|357639667|ref|ZP_09137540.1| DNA mismatch repair protein MutS [Streptococcus urinalis 2285-97]
gi|418416981|ref|ZP_12990179.1| DNA mismatch repair protein mutS [Streptococcus urinalis
FB127-CNA-2]
gi|357588121|gb|EHJ57529.1| DNA mismatch repair protein MutS [Streptococcus urinalis 2285-97]
gi|410873037|gb|EKS20973.1| DNA mismatch repair protein mutS [Streptococcus urinalis
FB127-CNA-2]
Length = 851
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 206/742 (27%), Positives = 353/742 (47%), Gaps = 77/742 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +DL T +F+ +P D ++ + + I+ +E L+ E L +
Sbjct: 139 GLAYMDLSTGEFFTT-VPSD--FTTVTSEILNLKAREVLVGYELLPE------------- 182
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
E L +N L+ ++ ++ +L+P L+ Y+
Sbjct: 183 -----------EEAILSNQMNLLLSYESDIYEDQKLIPNDLSIVEKTITGKLLQYVFKTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + ++ + Y+ MS SSL +L + S + + + SL LD +T G R
Sbjct: 232 KRELSHLQAVQHYEVKDYLQMSYTTKSSLDLL--ENSRTGKKHGSLYWYLDETKTAMGLR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL + IVER + + R +L E +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVTPEKIVERQEIITAFLEQFMERSDLTE-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRK----------- 378
KD ++ +SQ+P + SIL + N+ L + +L L+ + +
Sbjct: 349 PKDLIQLGNTLSQIPLIKSILATF-DNLYIDKLVNQIDALPELEGLINQSIDPQAPATIQ 407
Query: 379 ---------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMK 420
D +D ++ L+ R + + K +K++ N G+ + +T
Sbjct: 408 EGNIIRTGFDDKLDSYRQVLKEGTRWIAEIETKERQSSGISNLKIDYNKKDGYYFHVTNS 467
Query: 421 LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQ 480
+ + D + T++ R+ LA Q + E + +I V +
Sbjct: 468 HIDLVPDYFFRKATLKNSERYGTAELAKIEGQMLEAREESANLEYTIFMSVRSQVEKFII 527
Query: 481 TLNQLSDVLAQFDVLVSFSIASTCAPKPYV-RPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
L L+ +A DVL S ++ A K ++ +P S++ +HP+VE + G
Sbjct: 528 KLQHLAKTIASVDVLQSLAV---VAEKNHLTKPQFNDKQEISII--DGKHPVVEKVMGTQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPND+ F E + L+TGPNM GKSTY+R + ++V +AQ+G +V A + + D I
Sbjct: 583 EYIPNDICFDR-ETNIQLITGPNMSGKSTYMRQLALTVVMAQMGSYVAATEANLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E I++ T+ SL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANQAIRRSTKQSLILFDELGRGTATYDGMSLAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ L + +P NV VS +E + L+++ G KSYG+
Sbjct: 702 HIHHYVGAKTLFATHYHELTALEKELPHLVNVHVSTIENNGEVTFLHKIAEGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMF---- 774
H AK+AG P+D+L +A ++ YE T++ + ++N +E + V E + +F
Sbjct: 762 HVAKIAGLPDDLLNRANKVLNHYE----TQSKNQKISDNHDESESQFVNE-QLSLFITNE 816
Query: 775 DFLQQCLSLSKQKDTNRILHLQ 796
D Q+ +SL K+ D + LQ
Sbjct: 817 DDNQEVISLLKEVDVMNLTPLQ 838
>gi|419766521|ref|ZP_14292714.1| DNA mismatch repair protein MutS [Streptococcus mitis SK579]
gi|383353986|gb|EID31573.1| DNA mismatch repair protein MutS [Streptococcus mitis SK579]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 314/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDIHLLDSRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + I++R V + +++ R +L + L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTD-GLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L L S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDGIPELEGLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QYLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + ++S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DISIQLITGPNMSGKSTYMRQLAMTAVMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|418077288|ref|ZP_12714517.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47502]
gi|353745462|gb|EHD26131.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47502]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|419443478|ref|ZP_13983498.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13224]
gi|379549029|gb|EHZ14140.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13224]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 315/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|449919045|ref|ZP_21797681.1| DNA mismatch repair protein MutS [Streptococcus mutans 1SM1]
gi|449159742|gb|EMB63054.1| DNA mismatch repair protein MutS [Streptococcus mutans 1SM1]
Length = 849
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 199/684 (29%), Positives = 334/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D L A+ +E LN ++V
Sbjct: 139 GLSYMDLSTGEFYATTLAD------LSAV-----------RSEVLNLKARELVI------ 175
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
G + +E E+ + +N L+ F+ + + LL + L+ Y+
Sbjct: 176 ----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMCIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>gi|419496255|ref|ZP_14035969.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47461]
gi|133950344|gb|ABO44019.1| MutS [Streptococcus pneumoniae]
gi|379591755|gb|EHZ56575.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47461]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 318/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL + L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLASVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + I++R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +DK + L E T + A + T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|414157706|ref|ZP_11414002.1| DNA mismatch repair protein mutS [Streptococcus sp. F0441]
gi|410871624|gb|EKS19571.1| DNA mismatch repair protein mutS [Streptococcus sp. F0441]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/647 (29%), Positives = 321/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + ++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFFDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + S + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNSIQM-SEDTSIQLITGPNMSGKSTYMRQLAMTAIMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P ++L +A ++ + E S T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPVELLARADKILTQLE-SQGTESPA 793
>gi|386815603|ref|ZP_10102821.1| DNA mismatch repair protein MutS [Thiothrix nivea DSM 5205]
gi|386420179|gb|EIJ34014.1| DNA mismatch repair protein MutS [Thiothrix nivea DSM 5205]
Length = 857
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 205/681 (30%), Positives = 331/681 (48%), Gaps = 65/681 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +DL T +F + E D N E L PAE L+D + R
Sbjct: 141 TYGIACIDLSTGRFTVQEAESDTTLHN---------EIERLQPAEILHDEDWR--PAFSR 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
N C T R F E + + R D LP + +T A +L+NY++
Sbjct: 190 NHHC-TARPTWHFDRETAQRLLLRQFGTHDLSGFGCDHLP-LAITAAG----ALLNYVQE 243
Query: 208 MNNE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
++N ++ D + + + +A +L + + S S + ++L+ ++D+ T
Sbjct: 244 TQRTALPHINSLTVELSD--EGIILDAASRRNLEL---ESSLSGEHKNTLISVIDKTATS 298
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL +W+ +PL+D + + RH AV L+ +LH LRG+ D++ +A RI
Sbjct: 299 MGSRLLRRWLNKPLRDRNTLRNRHQAVGTLLEQYRYE-DLHN-TLRGIGDIERIASRIAL 356
Query: 326 KKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNVEASNLNTILSSLQSLKMMDR 377
A +D + + + LP + + L++L+Q++ N + L L ++D
Sbjct: 357 GSARPRDLSTLRDSLHVLPHIHAQIQPLDNPRLQALLQDI---NPHAELRHLLDSAIIDN 413
Query: 378 K--------------DAVMDKMKEYLES---------TARRLNLVADKTIKLENSPQGFA 414
DA +D+++ E+ T + DK N G+
Sbjct: 414 PPVVIRDGGVIASGFDAELDELRNLSENADQYLLDLETREKARTGIDKLKVAYNRVHGYY 473
Query: 415 YRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
+ + I Y T++G RF L + + + +++I E+++
Sbjct: 474 VEVPQSQLSRIPADYIRRQTLKGVERFILPELKKFEDKVLSARERSLAREKAIYEDLLRT 533
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVEL 534
A + L Q + +A+ DVL +F A + Y P + G+G + + RHP+VE
Sbjct: 534 LAEHLLPLRQSAQAIAELDVLGNF--AERASTLNYNCPALVE-GSG-IQIEGGRHPVVER 589
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
++PND+Y S ++TGPNMGGKSTY+R + + V LA IG +VP +A I
Sbjct: 590 TLDAPFVPNDLYMDSRRRML-MITGPNMGGKSTYMRQVALIVLLAHIGSYVPAQTARIGN 648
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
+D+IFTR+GA D G STFM+EM E A ++ T +SLV++DE+GRGTSTFDG +A
Sbjct: 649 IDRIFTRIGAHDDLSTGRSTFMVEMTEAANILNNATAHSLVLMDEIGRGTSTFDGLSLAW 708
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
+ A LA R+ FTLFATH+ E+ +L I T NV + A+E D +V L+ VK G +
Sbjct: 709 AFAEYLARERKAFTLFATHYFELTVLPEQISTIVNVHIDAIEHGDKIVFLHAVKEGPANQ 768
Query: 715 SYGVHCAKMAGYPEDMLEQAR 735
SYG+ A++AG P+ ++ QAR
Sbjct: 769 SYGLQVAQLAGVPKPVIAQAR 789
>gi|417916532|ref|ZP_12560109.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
SK95]
gi|342829423|gb|EGU63777.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
SK95]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEVFEDVHLLDSRLAAVEQTAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE++ Q A L+ I L +L S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEAMEQPALAYLIEQLDAIPELENLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGEDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNSIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P ++L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLE 785
>gi|307707759|ref|ZP_07644238.1| DNA mismatch repair protein MutS [Streptococcus mitis NCTC 12261]
gi|307616257|gb|EFN95451.1| DNA mismatch repair protein MutS [Streptococcus mitis NCTC 12261]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/647 (29%), Positives = 321/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLAAVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKVTLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P D+L +A ++ + E S T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-SQGTESPA 793
>gi|148984373|ref|ZP_01817661.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP3-BS71]
gi|387758237|ref|YP_006065216.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae OXC141]
gi|418233059|ref|ZP_12859642.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA07228]
gi|418236186|ref|ZP_12862754.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19690]
gi|419480894|ref|ZP_14020695.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19101]
gi|419500593|ref|ZP_14040284.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47597]
gi|147923150|gb|EDK74264.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SP3-BS71]
gi|301800826|emb|CBW33481.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae OXC141]
gi|353884637|gb|EHE64432.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA07228]
gi|353892418|gb|EHE72166.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19690]
gi|379569060|gb|EHZ34034.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19101]
gi|379597705|gb|EHZ62502.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47597]
gi|429316856|emb|CCP36581.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SPN034156]
gi|429320208|emb|CCP33545.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SPN034183]
gi|429322027|emb|CCP35519.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SPN994039]
gi|429323847|emb|CCP31560.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae
SPN994038]
Length = 844
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREESANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QYLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|373465659|ref|ZP_09557113.1| DNA mismatch repair protein MutS [Lactobacillus kisonensis F0435]
gi|371759776|gb|EHO48486.1| DNA mismatch repair protein MutS [Lactobacillus kisonensis F0435]
Length = 660
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 272/519 (52%), Gaps = 36/519 (6%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD+ +T G R L QW+++PL + + I ERH AV IL+++ R L + ++ +
Sbjct: 71 TLLWLLDQTKTAMGGRKLKQWIERPLVNSNKINERHDAVGILLDHYYERNQLQDELIK-V 129
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQN------VEASNLNTILS 367
D++ LA RI +D ++ + Q+PK+ ILE + + L+ I++
Sbjct: 130 YDLERLAGRIAFGSVNGRDLIQLKTSLQQVPKIKYILEQIADKSFKDMLTKLVPLDDIVN 189
Query: 368 SLQSLKMMDR----------KDAVMDKMKEYLESTARRLNLVAD------KTIKLENSPQ 411
+++ + + KD D++ +Y ++T +A+ K + N
Sbjct: 190 KIETAIVAEPPISITDGGVIKDGFDDQLDKYRDATNNGQKWLAELEAKERKVTGINNLKV 249
Query: 412 GF----AYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
GF Y I + L+ DRY T+ RF L Q + + +
Sbjct: 250 GFNHVFGYYIEVTKVNLSKVPVDRYQRKQTLANAERFSTPELKEKEALILEAQEQSKALE 309
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ ++ + + L+D +A DVL SF A+ +VRP + + +
Sbjct: 310 YKLFVKIREDIKKTIKRIQDLADAIASVDVLQSF--AAVSEEYRFVRPTL--TNQHEVAV 365
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP+VE + G Y+PNDV S + S L+TGPNM GKSTY+R + ++V + Q+GC
Sbjct: 366 KDGRHPVVEKVLGHQQYVPNDVEMGS-DTSVLLITGPNMSGKSTYMRQMALAVIMNQMGC 424
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP A + V D+IFTR+GAAD G STFM+EMKE I+ T NSL++ DE+GRG
Sbjct: 425 FVPAKKAKLPVFDKIFTRIGAADDLISGQSTFMVEMKEANDAIENATPNSLILFDEIGRG 484
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A +I + ++ TLF+TH+HE+ L + +NV V A E LV
Sbjct: 485 TATYDGMALAQAIIEYVHNNIGAKTLFSTHYHELTTLDESLNQLQNVHVGATESNGELVF 544
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L++++PG KSYG+H AK+AG P ++L +A D++ + E
Sbjct: 545 LHKIQPGPADKSYGIHVAKLAGLPNNLLSRANDILTKLE 583
>gi|421237166|ref|ZP_15693758.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2071004]
gi|395600104|gb|EJG60262.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2071004]
Length = 844
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKAMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|322375076|ref|ZP_08049590.1| DNA mismatch repair protein MutS [Streptococcus sp. C300]
gi|321280576|gb|EFX57615.1| DNA mismatch repair protein MutS [Streptococcus sp. C300]
Length = 844
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 320/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLPEEEEQILSRQMNLVISYEKEGFEDIHLLDSRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE L Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGLEQPALAYLIKQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS-LVLN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGEDSQIAIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P ++L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPGELLARADKILTQLE-NQGTESPA 793
>gi|417091961|ref|ZP_11956695.1| DNA mismatch repair protein MutS [Streptococcus suis R61]
gi|353532530|gb|EHC02199.1| DNA mismatch repair protein MutS [Streptococcus suis R61]
Length = 846
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 321/645 (49%), Gaps = 61/645 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + + G +E E+ +N L+ F+D ++ +L+ L++YL
Sbjct: 169 RARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKAAAGKLLSYLH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
D + + + Y+ M A SSL +L + + + + SL +LD +T
Sbjct: 229 RTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLL--ENGRTGKKHGSLYWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL DL I R A V + ++ R +L E AL+G+ D++ LA R+
Sbjct: 287 GMRLLRAWIDRPLIDLKRIESRQAVVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEAS---------NLNTILSS--------- 368
K KD ++ + + +P + +IL+ + Q S L+ ++SS
Sbjct: 346 KTMPKDLLQLSQTLGNVPAIKNILQQMDQPALTSLVAGLDPIPELHALISSAIDPDAQGA 405
Query: 369 --------------LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGF 413
L +++ R+ A E E A +N +K++ N G+
Sbjct: 406 ITDGNIIRTGFDETLDQYRLVMREGAGWIAEIEAKEREASGIN-----NLKIDYNKKDGY 460
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIV 468
+ +T +++ D + T++ R+ + LA Q ++ EYE + I
Sbjct: 461 YFHVTNSNLDNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMR-IR 519
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+EV Y L +L+ +A DVL +F++ A + ++ C + L +++ R
Sbjct: 520 QEV----EKYIGRLQKLARTIATIDVLQAFAV---VAEQQHL-VCPRFTDQRELTIDRGR 571
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN ++ + + L+TGPNM GKSTY+R + V V +AQ+G +VP
Sbjct: 572 HAVVEKVMGKQTYIPNSIHLNT-DTHMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPA 630
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D IFTR+GAAD G STFM+EM E ++ T+ SL++ DELGRGT+T+
Sbjct: 631 DQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATY 690
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + TLFATH+HE+ LS+ + NV VS LE++ + L+++
Sbjct: 691 DGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKI 750
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G KSYG+H AK+AG PE++LE+A +++ +L+ + P+
Sbjct: 751 AQGPADKSYGIHVAKIAGMPEELLERADRILQ----TLENQAPTA 791
>gi|169824440|ref|YP_001692051.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
gi|238687741|sp|B0S1C1.1|MUTS_FINM2 RecName: Full=DNA mismatch repair protein MutS
gi|167831245|dbj|BAG08161.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
Length = 856
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 218/782 (27%), Positives = 379/782 (48%), Gaps = 87/782 (11%)
Query: 26 CVHGEDAELIQRKSNVVYLVKTMGQKDKTLETVLVNK-SNLSCFSHILCVISEDKTLETV 84
C ED +L++ LVK K T TV+ N+ S+ F++++ + +
Sbjct: 86 CEQLEDPKLVKG------LVKRGIIKIYTPATVIENENSDTGNFNYLMSISKK------- 132
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK---NKI 141
+N V ++ +D+ T DD Y +E I + +PKE + ND++ N +
Sbjct: 133 -SNEVAISYIDISTGDVSYTNTTSDDIYKIIENEISKITPKEIIF-----NDHEFSTNSL 186
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
TI + + +T D + +N + +D++ + T C+ +L
Sbjct: 187 ETIASKFSIVLTTVNNGT----DSIDFINSKITYDNTNSE-----------TTNICVANL 231
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
+ Y+ +D ++ S ++++ + S + +L + Q+ + SL G+L+
Sbjct: 232 LKYV-FRYQDDLVHINSSRKYYINEFMEIDSNSVINLEI--QKNLYTNSKNGSLFGVLNH 288
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
+T G RLL ++++PL D + I+ R V + + E +NL E L G+ D+ L
Sbjct: 289 TKTSMGSRLLHSYLERPLMDKEEILIRQNRVEEIFEDYELLVNL-ENCLDGIYDLDRLIA 347
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRKDAV 381
++ K A KD + + ++P L ++L +NV+ + L L+ + + K V
Sbjct: 348 KLSYKSANAKDLIALKVSIEKIPYLKNLLNCNKKNVQL--IGEKLDDLRDIYDLIDKSIV 405
Query: 382 MD-------------------------------KMKEYLESTARRLNLVADKTIKLE-NS 409
D ++ EY S RL + K +K+ N
Sbjct: 406 DDPPVILTEGNLIKPNFSNELDQLRYNRVNGKNELVEYEMSEKDRLGI---KNLKIVFNK 462
Query: 410 PQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVE 469
G+ +T N + + Y T+ RF+ +L ++ + E + I E
Sbjct: 463 KLGYFIDVTKSNLNKVGEDYEKRQTLTNSSRFKTKQLEAIESKILDSEDEIFELEYKIFE 522
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRH 529
++ I + + +D++A DV S S+A Y++P + G ++ + RH
Sbjct: 523 DIRKIILENLSRIKKSADLIAIIDV--SNSLAKCAYLNNYIKPDINTYGLIDVL--ESRH 578
Query: 530 PIVELQGGVS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
PIVEL G S +I ND+ SG+ L+TGPNM GKSTY+R + + L QIG FVP
Sbjct: 579 PIVELSVGQSEFITNDILIGSGKNDIQLITGPNMSGKSTYLRQVALICILNQIGSFVPAT 638
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
A IS+VD+IFTR+G++D+ ++G STFM+EMKE + +IK T NSL+++DE+GRGTST+D
Sbjct: 639 KANISIVDKIFTRIGSSDNLFKGESTFMVEMKEMSNIIKYATSNSLLVLDEIGRGTSTYD 698
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
G +A +I ++ + TLFATH+HE+ L + + N++V E D+++ L ++
Sbjct: 699 GLSLAWAIVEYISKDIKAKTLFATHYHELTELEKKLDNLINMKVDIKETNDSIIFLRKIT 758
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT--PSGDETNNREEEYFKTV 766
GS KSYG+ A++AG P+ ++++A+ ++KE + DTK P D E E K +
Sbjct: 759 RGSTDKSYGIEVAELAGMPKTLIKRAKSILKEIDKE-DTKIDLPIADFAVQNEMEDDKNI 817
Query: 767 QE 768
E
Sbjct: 818 HE 819
>gi|418069533|ref|ZP_12706810.1| DNA mismatch repair protein MutS [Pediococcus acidilactici MA18/5M]
gi|357536064|gb|EHJ20095.1| DNA mismatch repair protein MutS [Pediococcus acidilactici MA18/5M]
Length = 894
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 308/599 (51%), Gaps = 60/599 (10%)
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV--LP 242
L+ ++ A ++ L+ Y+++ + + + + S Y+ M A +L + L
Sbjct: 213 LIQDLTSPIAVQVVKQLLMYVQVTQKRNLAHMQKAIAYEPSFYLRMDHASKYNLELTRLI 272
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ G +LL +LD +T G RLL QW+ +PL DAI R + V +L+ + R
Sbjct: 273 RTGKKQG----TLLWLLDETKTAMGGRLLKQWLDRPLIRKDAINARQSRVQVLLEHFFER 328
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNL 362
NL E L + D++ LA R+ +D ++ + Q+PK+ +L L V L
Sbjct: 329 SNLQE-ELTKVYDLERLAGRVAFGNVNGRDLIQLKTSLLQIPKIRHVLAELDDPVFDEAL 387
Query: 363 NTI--LSSLQSL--KMMDR------------KDAVMDKMKEYLESTARRLNLVAD----- 401
+ +S + L +D KD K+ EY ++ +AD
Sbjct: 388 TRLDPVSEIADLIEAAIDEDAPISVTEGNVIKDGYNPKLDEYRDAMRNGKKWIADLQAQE 447
Query: 402 -KTIKLENSPQG----FAYRITM---KLNNSIDDRYTILDTVRGGVRF------QDDRLA 447
+ ++N G F Y I + L + + RY T+ RF + +R+
Sbjct: 448 RQATGIKNLKIGYNKVFGYYIEVTRANLASVPEGRYERKQTLTNAERFITPELKEKERII 507
Query: 448 TANTQYQAIQREYETHQ---QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
Q ++ EYE + ++I E++ + L L+ +A+ DVL SF++ S
Sbjct: 508 LEAEQ-KSTDLEYELFKKIRETIKEQI--------ERLQNLAKQVAELDVLQSFAVVS-- 556
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
+V+P M + + + RHP+VE + G SY+PND+ + L+TGPNM
Sbjct: 557 EEYQFVKPTMTE--SHEIEIKAGRHPVVEKVMGHQSYVPNDILMNQ-DTEILLITGPNMS 613
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + ++V +AQ+GCFVP + AT+ + DQIFTR+GAAD G STFM+EM+E
Sbjct: 614 GKSTYMRQLALTVIMAQMGCFVPAEEATLPIFDQIFTRIGAADDLISGQSTFMVEMQEAN 673
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
+K T NSL++ DE+GRGT+T+DG +A SI + + TLF+TH+HE+ L +
Sbjct: 674 RALKDGTANSLILFDEIGRGTATYDGMALAQSIIEFIHQNVHAKTLFSTHYHELTALDQT 733
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ +NV V A+EQ+ NLV L++++ G KSYG+H AK+AG P+ +L +A ++++ E
Sbjct: 734 LTRLKNVHVGAVEQDGNLVFLHKMEDGPADKSYGIHVAKLAGMPDSLLARASVILEQLE 792
>gi|300312567|ref|YP_003776659.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1]
gi|300075352|gb|ADJ64751.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1]
Length = 894
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 271/536 (50%), Gaps = 48/536 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L LD CRT G RLL W+ L+D RHAA+N L+ T+A L L +
Sbjct: 303 TLFSTLDHCRTAMGSRLLRHWLHHALRDQQVARARHAAINALMR-TDACSGL-SATLAAV 360
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS-- 371
PD++ + RI A +D + G+ QL L + +E ++ +AS L + L +
Sbjct: 361 PDIERITTRIALLSARPRDLAGLRAGLQQLGSLRAYVEMCGRDADASLLTQLHEDLATPV 420
Query: 372 --LKMMDRK-------------------DAVMDKMKEYLEST--------ARRLNLVADK 402
L +++R DA +D+++ E+ AR
Sbjct: 421 ECLDLLERAIMLEPAAMVRDGGVIARGFDAELDELRGLSENAGQYLLDLEARERERTGIA 480
Query: 403 TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+++E N GF +T + + + Y T++ R+ L + + Q
Sbjct: 481 NLRVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSL 540
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST----CAPKPYVRPCMKPM 517
+ ++ + E+++G + L ++ LAQ D LV+ + + CAP+ PC++
Sbjct: 541 SREKFLYEQLLGDMGAHIVRLQAIAHALAQLDTLVALADHAVRNNWCAPQLVDEPCIQ-- 598
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ Q RHP+VE Q +I ND + E L+TGPNMGGKS ++R + +
Sbjct: 599 ------IEQGRHPVVENQIE-RFIANDCQL-AAERRLLLITGPNMGGKSIFMRQVALITL 650
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA +G FVP SA I VD+IFTR+GAAD G STFM+EM E+A ++ TE+SLV++
Sbjct: 651 LAYVGSFVPATSAVIGPVDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNATEHSLVLM 710
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTSTFDG +A +IA+ L + FTLFATH+ E+ L + PT NV +SA+E
Sbjct: 711 DEVGRGTSTFDGLALAWAIAKHLIDVTRSFTLFATHYFELTQLPEIHPTAANVHLSAVEH 770
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+D++V L+ V+ G +SYG+ A++AG P ++ AR + E TP D
Sbjct: 771 KDSIVFLHAVQSGPASQSYGLQVAQLAGVPAQVIRAARKHLSALESQSMQATPQFD 826
>gi|167382192|ref|XP_001736005.1| DNA mismatch repair protein MSH2 [Entamoeba dispar SAW760]
gi|165901736|gb|EDR27769.1| DNA mismatch repair protein MSH2, putative [Entamoeba dispar
SAW760]
Length = 594
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 269/512 (52%), Gaps = 38/512 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L L+R T G +++ +W++QPL D D I +R V N+E + + L +
Sbjct: 30 TLFKHLNRTHTKIGEKMIKEWIRQPLIDKDKINKRLELVEGFYENSEIGLKIKNEELAIM 89
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGV--------SQLPKLISILESLVQNVEASN---- 361
D++ L G K+ L+ ++YE V ++ K ++ +L+ E N
Sbjct: 90 ADLEKLIK--GINKSDLESIVKLYEAVRISKKRISEEMEKFEEMVVTLIDIEETKNHVFK 147
Query: 362 -LNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRIT-- 418
LQ ++ +K V + ++ LE A L++ DK IK+ R++
Sbjct: 148 IREDFDEGLQKIRENHKK--VEELFEKCLEQAANDLSIKTDK-IKIIEYNNNLILRVSKS 204
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGY 478
+ + +YT++ T++G +F + T N + + + E + +EE+ + GY
Sbjct: 205 NEKEVKKNKKYTVIQTLKGECKFTFKEMQTLNVKRDKLNLKEEEINKKFIEEINKVIEGY 264
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV 538
+T +L +++ D + SF A+ + K G + + + RHP++E
Sbjct: 265 KETFKELENIIGYIDCIQSF--ATNESEK------------GIIKIKKARHPLIENNSIN 310
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
++I ND+ E F ++TGPNMGGKSTY+R IG+ V +AQIG F+PC IS+ D+I
Sbjct: 311 TFIENDIDINRKETRFQIITGPNMGGKSTYLRMIGLCVIMAQIGMFIPCSEVDISICDKI 370
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
R+GA D+ G+STFM EMK+T+ +IKK T+NSLV+IDELGRGTST+DGFG+A I+
Sbjct: 371 MCRIGAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLIDELGRGTSTYDGFGIAWGISE 430
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
LA + +FATHFHEI L + + N V A + LVL Y++K GS +S +
Sbjct: 431 YLAIDIGCYCVFATHFHEITGLEKRVNGVINKHVEADIIDKQLVLKYKIKNGSTEQSLAI 490
Query: 719 HCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
+ A+ A +P +++E A+ KE LD P
Sbjct: 491 YVAEWADFPHEVVESAKRKAKE----LDLDQP 518
>gi|251766515|gb|ACC61787.1| DNA mismatch repair protein [Streptococcus pneumoniae]
Length = 844
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 315/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDIHLLDPRLAAVEQAAASKLLRYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|406586640|ref|ZP_11061567.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD1S]
gi|419813732|ref|ZP_14338544.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD2S]
gi|419817182|ref|ZP_14341350.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD4S]
gi|404466312|gb|EKA11656.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD4S]
gi|404472665|gb|EKA17082.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD2S]
gi|404473892|gb|EKA18216.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD1S]
Length = 844
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 192/648 (29%), Positives = 325/648 (50%), Gaps = 66/648 (10%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDIHLLDPRLAAVEQAAASKLLQYVH 228
Query: 207 LMN-NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
E N + IH + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIH-YEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTA 285
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 286 MGMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSF 344
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK-- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 345 GKTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPH 404
Query: 379 ------------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRI 417
D +DK + L + + K T+K++ N G+ + +
Sbjct: 405 VITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQ 465
T ++ + T++ RF + LA +AN +Y+ R
Sbjct: 465 TNSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR------- 517
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-L 524
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 -IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDI 567
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G
Sbjct: 568 QKGRHAVVEKVMGAQTYIPNSIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGS 626
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
+VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRG
Sbjct: 627 YVPAESAHLPIFDTIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRG 686
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ +
Sbjct: 687 TATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTF 746
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
L++++PG KSYG+H AK+AG P ++L +A ++ + E + T++P+
Sbjct: 747 LHKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLE-NQGTESPA 793
>gi|160947536|ref|ZP_02094703.1| hypothetical protein PEPMIC_01470 [Parvimonas micra ATCC 33270]
gi|158446670|gb|EDP23665.1| DNA mismatch repair protein MutS [Parvimonas micra ATCC 33270]
Length = 861
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 186/675 (27%), Positives = 341/675 (50%), Gaps = 64/675 (9%)
Query: 105 EIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEED 164
E+ D+ + LE +++ +P E ++ + L + ++ +L ++ +++ D
Sbjct: 156 EMNRDNLITALEEEVIRTTPSEVIINSNILKSLEKSVIKLLKNLRII--------YTKVD 207
Query: 165 LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDY 224
+ QD L R ++ E + L ++ L + + + + + +N+ +N + +
Sbjct: 208 IDQDFKSL-RENNEEFYSNNLSNKILLFSIDNFYKYVCRFNVKLNDFKKVNLYKL----- 261
Query: 225 SKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDA 284
S Y+ + + S +++ ++ + S SLL +++ +TP G RLL +W+ QPL +++
Sbjct: 262 SDYLRIDAN--SRINLELKKNNFSNDINGSLLSVINHTKTPMGFRLLNKWLDQPLIEIEK 319
Query: 285 IVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP 344
I R + V LV N+ R L E L + D++ + +I +D + +S +P
Sbjct: 320 IQRRQSLVEDLVLNSNLRNKLEE-LLASISDIERINSKISFGNCNARDLIHLKNSLSAVP 378
Query: 345 KLISIL---ESLVQNVEASNLNT--ILSSLQSLKMMD----------------------R 377
K+ + +L N+ + +T I + + S + D R
Sbjct: 379 KIKKLFLDSNTLFSNIALNIPDTEYIYNLIDSAILEDVGILLKEGNLIKIGYDEELDVIR 438
Query: 378 KDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVR 436
+ ++ K K +R N+ K ++L N G+ + +T N + + + + T+
Sbjct: 439 NNKIVGKEKLIKYEVDQR-NITGIKNLRLIFNKKTGYFFEVTKSYQNLVPEYFELKQTLT 497
Query: 437 GGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQ 491
R++ + L T ++ I++EYE + I ++ + L +LSD+++
Sbjct: 498 NANRYKTNELLTIENMIFGSEIDIIEKEYELFIS--IRNTIKMN---IKILQKLSDIISF 552
Query: 492 FDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE--LQGGVSYIPNDVYFKS 549
D + S SI + Y +P + G + + RHP++E L +IPND
Sbjct: 553 IDSIFSLSIVA--FKNNYCKPTLNSEGI--IDIKNGRHPVIESFLSSINEFIPNDTNIGQ 608
Query: 550 GEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQY 609
+ ++TGPNM GKSTYIR I + V LAQIG FVP DSA IS+VD+IFTR+GA+D+ Y
Sbjct: 609 SDNLIQIITGPNMSGKSTYIRQIALIVILAQIGSFVPADSANISIVDKIFTRIGASDNLY 668
Query: 610 RGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTL 669
+G STFM+EMKE +++ T+NSL+I+DE+GRGTSTFDG +A +I + + + TL
Sbjct: 669 KGESTFMVEMKEVNNILRYATKNSLLILDEVGRGTSTFDGLSLAWAILEYITKNIKSKTL 728
Query: 670 FATHFHEIALLSRVIPTFRNVQVSALEQEDN--LVLLYQVKPGSCVKSYGVHCAKMAGYP 727
FATH+HE+ L +N + +E ++N +V L ++ G KSYG+ AK+AG P
Sbjct: 729 FATHYHELIDLEHTFACIKNKHIQVIEDKENDEIVFLRKIMDGGANKSYGIAVAKLAGLP 788
Query: 728 EDMLEQARDLMKEYE 742
+++ +++ ++ E
Sbjct: 789 MEVINRSKIILDSIE 803
>gi|333897075|ref|YP_004470949.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112340|gb|AEF17277.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 857
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 190/699 (27%), Positives = 355/699 (50%), Gaps = 78/699 (11%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ VD+ T + ++ +I + + I++ SP E + ++ ++V IL+ +K
Sbjct: 137 GLSFVDVLTGELFVTQITKCNDIRKIYDEIMRYSPSEIIANNDFFE--LKRLVKILNSSK 194
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V + K + ED++ + +F+ R L ++ L + ++SL + L +
Sbjct: 195 VFINKYDKVLNNAEDII-----ITQFN-------RSLKDLKLERKKYAIKSLASVLLYLK 242
Query: 210 NEDNMNQFSIHSIDY---SKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ ++++ Y + ++ + + + +L ++ +++ +LL +LD+ TP
Sbjct: 243 EMQKVELKQLNNLTYYEDNSFMLLDNNTIRNLEIVYSINRDHSKS-GTLLSVLDQTVTPM 301
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL +W+++PL D++ I R +V+ L N+ + R+++ + L+G+ D++ L+ ++ +
Sbjct: 302 GGRLLKRWLEEPLIDVEKINYRLNSVSELYNDYKGRLDIRD-ILKGIYDLERLSSKLVYQ 360
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRKDAVMDKMK 386
KD + + +LPKL +L+ N L I S L +L+ D D + +K
Sbjct: 361 NINAKDLLSIKISIERLPKLKQLLDKYKSNY----LKEIFSKLDTLQ--DIHDLIDKSIK 414
Query: 387 EYLESTARRLNLVAD---------------------------------KTIKLE-NSPQG 412
+ S + N++ D KT+K+ N G
Sbjct: 415 DDPSSNVKEGNIIKDGFDKNIDELRRASIDGKSWIANLESYEKEKTGIKTLKIGYNKVFG 474
Query: 413 FAYRITMKLNNSIDDRYTILDTVRGGVRFQ-------DDRLATANTQYQAIQREYETHQQ 465
+ ++ +S+ + Y T+ R+ ++++ A T+ ++ EYE +
Sbjct: 475 YYIEVSKSYISSVPENYIRKQTLANAERYITPELKEIEEKILGAETK--LVEMEYEIFDR 532
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
I E++ + S +A DVLVS +A+ YV+P + + +V+
Sbjct: 533 -IREQI----KNEIYRIQMTSRYIAILDVLVS--LATVAETNNYVKPIVN--SSDRIVIK 583
Query: 526 QCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RHP++E S+I ND+ + ++TGPNM GKSTY+R + + V +AQIG FV
Sbjct: 584 DGRHPVIETIMDDSFISNDIEIDDKK-PIMIITGPNMAGKSTYMRQVALIVLMAQIGSFV 642
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P A I VVD+IFTRVGA+D + G STFM+EM E + ++ T+NSL+I+DE+GRGTS
Sbjct: 643 PASYAEIGVVDRIFTRVGASDDLFSGQSTFMVEMNEVSLILNSATKNSLIILDEVGRGTS 702
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
T+DG +AC+I + + T+FATH+HE+ L + +N +S E +D ++ L
Sbjct: 703 TYDGMSIACAILEYIHDKIKAKTMFATHYHELTNLEDKLDGIKNYNISVEETDDEIIFLR 762
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
++ PG+ KSYG+ AK+AG P+++++ A+ ++ E S
Sbjct: 763 KIIPGAADKSYGIQVAKLAGLPDEVIQNAKKILNNLENS 801
>gi|304385250|ref|ZP_07367595.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
gi|304328457|gb|EFL95678.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
Length = 894
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 307/599 (51%), Gaps = 60/599 (10%)
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV--LP 242
L+ + A ++ L+ Y+++ + + + + S Y+ M A +L + L
Sbjct: 213 LIQNLTSPIAVQVVKQLLMYVQVTQKRNLAHMQKAIAYEPSFYLRMDHASKYNLELTRLI 272
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ G +LL +LD +T G RLL QW+ +PL DAI R + V +L+ + R
Sbjct: 273 RTGKKQG----TLLWLLDETKTAMGGRLLKQWLDRPLIRKDAINARQSRVQVLLEHFFER 328
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNL 362
NL E L + D++ LA R+ +D ++ + Q+PK+ +L L V L
Sbjct: 329 SNLQE-ELTKVYDLERLAGRVAFGNVNGRDLIQLKTSLLQIPKIRHVLAELDDPVFDEAL 387
Query: 363 NTI--LSSLQSL--KMMDR------------KDAVMDKMKEYLESTARRLNLVAD----- 401
+ +S + L +D KD K+ EY ++ +AD
Sbjct: 388 TRLDPVSEIADLIEAAIDEDAPISVTEGNVIKDGYNPKLDEYRDAMRNGKKWIADLQAQE 447
Query: 402 -KTIKLENSPQG----FAYRITM---KLNNSIDDRYTILDTVRGGVRF------QDDRLA 447
+ ++N G F Y I + L + + RY T+ RF + +R+
Sbjct: 448 RQATGIKNLKIGYNKVFGYYIEVTRANLASVPEGRYERKQTLTNAERFITPELKEKERII 507
Query: 448 TANTQYQAIQREYETHQ---QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
Q ++ EYE + ++I E++ + L L+ +A+ DVL SF++ S
Sbjct: 508 LEAEQ-KSTDLEYELFKKIRETIKEQI--------ERLQNLAKQVAELDVLQSFAVVS-- 556
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
+V+P M + + + RHP+VE + G SY+PND+ + L+TGPNM
Sbjct: 557 EEYQFVKPTMTE--SHEIEIKAGRHPVVEKVMGHQSYVPNDILMNQ-DTEILLITGPNMS 613
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + ++V +AQ+GCFVP + AT+ + DQIFTR+GAAD G STFM+EM+E
Sbjct: 614 GKSTYMRQLALTVIMAQMGCFVPAEEATLPIFDQIFTRIGAADDLISGQSTFMVEMQEAN 673
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
+K T NSL++ DE+GRGT+T+DG +A SI + + TLF+TH+HE+ L +
Sbjct: 674 RALKDGTANSLILFDEIGRGTATYDGMALAQSIIEFIHQNVHAKTLFSTHYHELTALDQT 733
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ +NV V A+EQ+ NLV L++++ G KSYG+H AK+AG P+ +L +A ++++ E
Sbjct: 734 LTRLKNVHVGAVEQDGNLVFLHKMEDGPADKSYGIHVAKLAGMPDSLLARASVILEQLE 792
>gi|421894542|ref|ZP_16325030.1| DNA mismatch repair protein MutS [Pediococcus pentosaceus IE-3]
gi|385272632|emb|CCG90402.1| DNA mismatch repair protein MutS [Pediococcus pentosaceus IE-3]
Length = 873
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 272/519 (52%), Gaps = 36/519 (6%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G RLL QW+ +PL I+ R V +LV++ R NL E L +
Sbjct: 280 TLLWLLDETKTAMGGRLLKQWLDRPLIRKKEIISRQDRVQVLVDHFFERSNLQE-ELTKV 338
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQS 371
D++ LA R+ +D ++ + Q+PK+ ILE L + V L + +S +
Sbjct: 339 YDLERLAGRVAFGSVNGRDLIQLKTSLLQIPKVRHILEELSEPVFDDALEHLDPVSDIAE 398
Query: 372 L--KMMDR------------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
L +D KD K+ EY ++ +AD KT+K+
Sbjct: 399 LIQNAIDEDAPISVTDGDIIKDGYHAKLDEYRDAMRNGKKWIADLQAQERATTGIKTLKI 458
Query: 407 E-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
N G+ +T L N + RY T+ RF L +++ +
Sbjct: 459 GYNKVFGYYIEVTRANLANIPEGRYERKQTLTNAERFITPELKEKERIILEAEQKSTDLE 518
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ +E+ + + L L+ +A+ DVL SF++ S +V+P M ++ +
Sbjct: 519 YQLFKEIRELIKKQIERLQDLAKQVAELDVLQSFAVVS--EKYQFVKPTM--TKNHAIEI 574
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP+VE + G SY+PND+ L+TGPNM GKSTY+R + ++V +AQ+GC
Sbjct: 575 KDGRHPVVEKVMGHQSYVPNDIDMDDN-TDILLITGPNMSGKSTYMRQLALTVIMAQMGC 633
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FV AT+ + DQIFTR+GAAD G STFM+EM+E +K T NSLV+ DE+GRG
Sbjct: 634 FVAASEATLPIFDQIFTRIGAADDLISGQSTFMVEMQEANRALKDGTSNSLVLFDEIGRG 693
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A SI + + TLF+TH+HE+ L + + +NV V A+EQ NLV
Sbjct: 694 TATYDGMALAQSIIEFIHQNVHAKTLFSTHYHELTELDQSLEHLKNVHVGAVEQNGNLVF 753
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L++++ G KSYG+H AK+AG P+ +L++A ++++ E
Sbjct: 754 LHKMEDGPADKSYGIHVAKLAGMPDKLLKRASVILEKLE 792
>gi|421489405|ref|ZP_15936787.1| DNA mismatch repair protein MutS [Streptococcus oralis SK304]
gi|400366037|gb|EJP19079.1| DNA mismatch repair protein MutS [Streptococcus oralis SK304]
Length = 844
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 320/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEVFEDLHLLDSRLAAVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKKRIVQRQDVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALGYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQIG +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAITAVMAQIGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLGSSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P ++L +A ++ + E S T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLE-SQGTESPA 793
>gi|302380515|ref|ZP_07268980.1| DNA mismatch repair protein MutS [Finegoldia magna ACS-171-V-Col3]
gi|302311458|gb|EFK93474.1| DNA mismatch repair protein MutS [Finegoldia magna ACS-171-V-Col3]
Length = 856
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 218/785 (27%), Positives = 379/785 (48%), Gaps = 93/785 (11%)
Query: 26 CVHGEDAELIQRKSNVVYLVKTMGQKDKTLETVLVNK-SNLSCFSHILCVISEDKTLETV 84
C ED +L++ LVK K T TV+ N+ S+ F++++ + +
Sbjct: 86 CEQLEDPKLVKG------LVKRGIIKIYTPATVIENENSDTGNFNYLMSISKK------- 132
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK---NKI 141
+N V ++ +D+ T DD Y +E I + +PKE + ND++ N +
Sbjct: 133 -SNEVAISYIDISTGDVSYTNTTSDDIYKIIENEISKITPKEIIF-----NDHEFSTNSL 186
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
TI + + +T D + +N + +D++ + T C+ +L
Sbjct: 187 ETIASKFSIVLTTVNNGT----DSIDFINSKITYDNTNSE-----------TTNICVANL 231
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
+ Y+ +D ++ S ++++ + S + +L + Q+ + SL G+L+
Sbjct: 232 LKYV-FRYQDDLVHINSSRKYYINEFMEIDSNSVINLEI--QKNLYTNSKNGSLFGVLNH 288
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
+T G RLL ++++PL D I+ R V + + E +NL E L G+ D+ L
Sbjct: 289 TKTSMGSRLLHSYLERPLMDKAEILIRQNRVEEIFEDYELLVNL-ENCLDGIYDLDRLIA 347
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK-------- 373
++ K A KD + + ++P L ++L N N+ I L L+
Sbjct: 348 KLSYKSANAKDLIALKVSIEKIPYLKNLL-----NCNKKNIQLIGEKLDDLRDIYDLIDK 402
Query: 374 -MMDRKDAVM-------------------------DKMKEYLESTARRLNLVADKTIKLE 407
++D ++ +++ EY S RL + K +K+
Sbjct: 403 SIVDDPPVILTEGNLIKPNFSNELDQLRYNRVNGKNELVEYEMSEKDRLGI---KNLKIV 459
Query: 408 -NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
N G+ +T N + + Y T+ RF+ +L ++ + E +
Sbjct: 460 FNKKLGYFIDVTKSNLNKVGEDYEKRQTLTNSSRFKTKQLEAIESKILDSEDEIFELEYK 519
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I E++ I + + +D++A DV S S+A Y++P + G ++ +
Sbjct: 520 IFEDIRKIILENLSRIKKSADLIAIIDV--SNSLAKCAYLNNYIKPDINTYGLIDVL--E 575
Query: 527 CRHPIVELQGGVS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RHPIVEL G S +I ND+ SG+ L+TGPNM GKSTY+R + + L QIG FV
Sbjct: 576 SRHPIVELSVGQSEFITNDILIGSGKNDIQLITGPNMSGKSTYLRQVALICILNQIGSFV 635
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P A IS+VD+IFTR+G++D+ ++G STFM+EMKE + +IK T NSL+++DE+GRGTS
Sbjct: 636 PATKANISIVDKIFTRIGSSDNLFKGESTFMVEMKEMSNIIKYATSNSLLVLDEIGRGTS 695
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
TFDG +A +I ++ + + TLFATH+HE+ L + + N++V E D+++ L
Sbjct: 696 TFDGLSLARAIVEYISKNIKAKTLFATHYHELTELEKKLDNLINMKVDIKETNDSIIFLR 755
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT--PSGDETNNREEEYF 763
++ GS KSYG+ A++AG P+ ++++A+ ++KE + DTK P D E E
Sbjct: 756 KITRGSTDKSYGIEVAELAGMPKTLIKRAKSILKEIDKE-DTKIDLPIADFAVQNEMEDD 814
Query: 764 KTVQE 768
K + E
Sbjct: 815 KNIHE 819
>gi|387627221|ref|YP_006063397.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae INV104]
gi|417694940|ref|ZP_12344124.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47901]
gi|444382913|ref|ZP_21181110.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PCS8106]
gi|444384246|ref|ZP_21182342.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PCS8203]
gi|301795007|emb|CBW37471.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae INV104]
gi|332198889|gb|EGJ12970.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47901]
gi|444250844|gb|ELU57319.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PCS8106]
gi|444252900|gb|ELU59360.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae PCS8203]
Length = 844
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 288/558 (51%), Gaps = 63/558 (11%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A +SL ++ + + S + SL +LD +T G RLL W+ +PL D + IV
Sbjct: 249 FLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAMGMRLLRSWIHRPLIDKERIV 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V + +++ R +L + +L+G+ D++ LA R+ K KD ++ +S +P++
Sbjct: 307 QRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFGKTNPKDLLQLATTLSSVPRI 365
Query: 347 ISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--------------DAVMDKMKE 387
+ILE + Q A + L+ I L SL S + D +DK +
Sbjct: 366 RAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHVITDGGIIRTGFDETLDKYRC 425
Query: 388 YLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
L + + K T+K++ N G+ + +T ++ + T++
Sbjct: 426 VLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNS 485
Query: 439 VRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
RF + LA +AN +Y+ R I EEV Y Q L L+
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYEIFMR--------IREEV----GKYIQRLQALA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVE-LQGGVSYIPND 544
+A DVL S ++ + + +RP G S + + + RH +VE + G +YIPN
Sbjct: 534 QGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIRKGRHAVVEKVMGAQTYIPNT 588
Query: 545 VYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGA 604
+ + + S L+TGPNM GKSTY+R + ++ +AQ+G +VP +SA + + D IFTR+GA
Sbjct: 589 IQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGA 647
Query: 605 ADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR 664
AD G STFM+EM E I T+NSL++ DELGRGT+T+DG +A SI + H
Sbjct: 648 ADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEHI 707
Query: 665 QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMA 724
TLFATH+HE+ L + NV V+ LEQ+ + L++++PG KSYG+H AK+A
Sbjct: 708 GAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKIA 767
Query: 725 GYPEDMLEQARDLMKEYE 742
G P D+L +A ++ + E
Sbjct: 768 GLPADLLARADKILTQLE 785
>gi|152976135|ref|YP_001375652.1| DNA mismatch repair protein MutS [Bacillus cytotoxicus NVH 391-98]
gi|189030697|sp|A7GR99.1|MUTS_BACCN RecName: Full=DNA mismatch repair protein MutS
gi|152024887|gb|ABS22657.1| DNA mismatch repair protein MutS [Bacillus cytotoxicus NVH 391-98]
Length = 895
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 282/544 (51%), Gaps = 50/544 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L ++L
Sbjct: 337 YDLERLAGKVAYGSVNARDLLQLKRSLQQVPAILEAI-SLLDNSYAAKLIEGADPCEALT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
K++DR KD +K+ EY E R + K++K
Sbjct: 396 KLLDRSIQENPPLSVKDGDIIKDGYNEKLDEYRYISKNGKTWIAELEKREREITGIKSLK 455
Query: 406 LE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQ 457
+ N G+ +T K N S+ + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVT-KANLSLLPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQ 514
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 515 LEYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEERFVKPVL--T 565
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 566 NKREIFIKDGRHPVVEKVLDGKLYVPNDCMMPENMDVF-LITGPNMSGKSTYMRQLALVT 624
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 625 IMAQIGCFVPATEAILPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLIL 684
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E
Sbjct: 685 FDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLTHLKNVHVSAIE 744
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETN 756
++ +V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 745 EDGKVVFLHKIQEGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEITIPKRTEVK 804
Query: 757 NREE 760
+ E
Sbjct: 805 EQPE 808
>gi|417885084|ref|ZP_12529243.1| DNA mismatch repair protein MutS [Lactobacillus oris F0423]
gi|341596380|gb|EGS38983.1| DNA mismatch repair protein MutS [Lactobacillus oris F0423]
Length = 884
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 301/606 (49%), Gaps = 72/606 (11%)
Query: 218 SIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
S ID+ Y + +M++L +QG+ S +LD +T G RLL +W+ +
Sbjct: 250 SFMKIDH--YSKTNLELMTNLRSGKRQGTLS--------WLLDETKTAMGSRLLKRWLDR 299
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL D AI ER V L+++ R NL E ++ + D++ LA R+ +D ++
Sbjct: 300 PLIDPTAIKERQDKVAELLDHYFERSNLQEELIK-VYDLERLAGRVAYGSVNGRDLIQLK 358
Query: 338 EGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK-MMDR----------------KDA 380
+ Q+PK+ +LE+L V ++L + L L + ++DR KD
Sbjct: 359 TSLEQVPKIKYVLEALDSPV-FTDLTSRLDPLTDIADLIDRAIVEEPPIAVTDGGVIKDG 417
Query: 381 VMDKMKEYLESTARRLNLVAD------KTIKLENSPQG----FAYRI---TMKLNNSIDD 427
D++ +Y ++ +AD + + N G F Y I + L+ D
Sbjct: 418 YNDQLDQYRDAMNNGKQWIADLQEQERQVTGINNLKIGYNHVFGYFIEVTKVNLDKIPRD 477
Query: 428 RYTILDTVRGGVRFQDDRLATA-----NTQYQAIQREYETH---QQSIVEEVIGISAGYT 479
RY T+ RF L Q +++ EY+ ++ + E++
Sbjct: 478 RYERKQTLVNAERFSTPELKEKEALILGAQEKSVALEYDLFVKIREQVKEQI-------- 529
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
Q L +L+ L++ DVL SF++ S +VRP M L + RHP+VE G
Sbjct: 530 QRLQKLAQALSELDVLQSFAVVSEDYH--FVRPIMN--SGHQLQIKDGRHPVVEKFMGHQ 585
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
Y+PNDV + L+TGPNM GKSTY+R + ++ +AQ+GCFVP A + + DQI
Sbjct: 586 EYVPNDVQM-GDDTDILLITGPNMSGKSTYMRQLALTAVMAQMGCFVPASRAELPIFDQI 644
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E + T+ SL++ DE+GRGT+T+DG +A +I
Sbjct: 645 FTRIGAADDLISGESTFMVEMMEANNALSHATDRSLILFDEIGRGTATYDGMALAQAIIE 704
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ H + TLF+TH+HE+ L +P +NV V A E+ LV L++V G KSYG+
Sbjct: 705 YVHQHVRAKTLFSTHYHELTSLEETLPRLKNVHVGATEKNGELVFLHKVSAGPADKSYGI 764
Query: 719 HCAKMAGYPEDMLEQARDLMKEYEYSLD--TKTPSGDETNNREEEYFKTVQEGEYQMFDF 776
H AK+AG P +L++A ++++ E K + D TN T Q+ Q D
Sbjct: 765 HVAKLAGMPAPLLKRADQILQKLENKEAELAKKGAADPTNQ------PTPQQPAAQPNDR 818
Query: 777 LQQCLS 782
+Q+ L+
Sbjct: 819 VQEALA 824
>gi|262283656|ref|ZP_06061421.1| DNA mismatch repair protein mutS [Streptococcus sp. 2_1_36FAA]
gi|262260713|gb|EEY79414.1| DNA mismatch repair protein mutS [Streptococcus sp. 2_1_36FAA]
Length = 847
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 171/569 (30%), Positives = 292/569 (51%), Gaps = 71/569 (12%)
Query: 220 HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPL 279
H + ++ M A +SL + + + + + + SL ++D +T G RLL W++ PL
Sbjct: 242 HHYEIKDFLQMDYATKTSLDL--TENARTGKKHGSLFWLMDETKTAMGGRLLRSWIQHPL 299
Query: 280 KDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEG 339
D I++R V + ++ R +L + +L+G+ D++ L R+ K KD ++
Sbjct: 300 IDKGRIIKRQNVVQVFLDYFFERSDLAD-SLKGVYDIERLVSRVSFGKTNPKDLLQLSST 358
Query: 340 VSQLPKLISILESLVQNVEASNLNTILSSLQSL--------------------------- 372
+S +P++ SILE+ +E+ L ++++ L ++
Sbjct: 359 LSHVPQIRSILET----IESPALESLVARLDAIPELENLISSAIDPDAPQVITEGNIIRT 414
Query: 373 ---KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID 426
+ +D+ VM + ++ ES R + +A+ I N G+ + +T ++
Sbjct: 415 GFDETLDQYRLVMREGTSWIADIESKEREASGIANLKIDY-NKKDGYYFHVTNSQLGNVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGI 474
+ T++ RF + LA +AN +Y+ R I EEV
Sbjct: 474 SHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREEV--- 522
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
Y Q L L+ LA DVL SF++ + + VRP + SL + + RH ++E
Sbjct: 523 -GKYIQRLQALAQTLATVDVLQSFAVVAES--QHLVRPSFT--SSRSLQIKKGRHAVIEK 577
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +VP + A++
Sbjct: 578 VMGAQSYIPNSIELDQ-ETDIQLITGPNMSGKSTYMRQLAMIVIMAQMGSYVPAEVASLP 636
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ D IFTR+GAAD G STFM+EM E I++ +++SL++ DELGRGT+T+DG +A
Sbjct: 637 IFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASDHSLILFDELGRGTATYDGMALA 696
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
+I + + TLFATH+HE+ LS + NV V+ LE++ + L++++ G
Sbjct: 697 QAIIEYIHDRTKAKTLFATHYHELTGLSSSLTRLENVHVATLEKDGQVTFLHKIEAGPAD 756
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+H AK+AG P+D+L +A ++ + E
Sbjct: 757 KSYGIHVAKIAGLPKDLLTRADAILTDLE 785
>gi|389575732|ref|ZP_10165760.1| DNA mismatch repair protein MutS [Eubacterium cellulosolvens 6]
gi|389311217|gb|EIM56150.1| DNA mismatch repair protein MutS [Eubacterium cellulosolvens 6]
Length = 878
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 210/707 (29%), Positives = 346/707 (48%), Gaps = 66/707 (9%)
Query: 128 LLPAEYLNDNKNKIVTILD------RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELK 181
+PAE + N++ +V+ +D R ++ +T + F +E+ + + + F S++K
Sbjct: 166 FMPAEIIC-NQSLMVSGVDTDELRSRFRIAVTALEDFYFDDENCRKILKK--HFHVSDMK 222
Query: 182 NARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVL 241
+ C T A L S + Y N D M + + D +Y+ + S+ +L ++
Sbjct: 223 GLGIDDFNCGTIAAGALFSYL-YETQKTNMDQMTAITPYFSD--RYMLLDSSTRRNLELV 279
Query: 242 PQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEA 301
+ Q SLLG+LDR +T G R+L +++QPL + D I +R AV LV
Sbjct: 280 --ETLREKQKRGSLLGVLDRTKTAMGARMLRSFVEQPLINKDEIEKRLTAVEELVKMPMI 337
Query: 302 RMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASN 361
R + EY L+ + D++ LA RI + A +D + LP + L+ E
Sbjct: 338 RDEIREY-LQPVYDLERLASRITYQSANPRDLIAFKTSLEMLP----FIRQLLSGFEGEQ 392
Query: 362 LNTILSSLQSLK-----------------------MMDRKDAVMDKMKEYLESTARRL-N 397
+ I +L L+ + D + ++D +E ++ + L +
Sbjct: 393 IREIRENLDPLEDLYDAVQAAIIDDPPLAMKEGGIIRDGYNEMVDSFREAKKNGQKWLSD 452
Query: 398 LVAD-------KTIKLENSPQ-GFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATA 449
L A+ KT++++ S G+ +T + + + Y T+ G R+ RL
Sbjct: 453 LEAEEREKTGIKTLRVKYSRVFGYCIEVTNSFKDKVPEEYMRKQTLTGSERYTTVRLKEI 512
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
Q + + + + EV A + + + +A DV SF+ S Y
Sbjct: 513 EEQIVGAEDRLGSLEYELFSEVRNTIAQNVARVQKTAQAIAALDVFCSFAYIS--ERNRY 570
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
VRP + +G L + + RHP+VE + +I ND Y + ++TGPNM GKSTY
Sbjct: 571 VRPKLNK--SGKLDIKEGRHPVVERMIPDDLFIANDTYLDQNDHRVAVITGPNMAGKSTY 628
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
+R + V +AQIGCFVP SA I +VD+IFTRVGA+D G STFM+EM E A +++
Sbjct: 629 MRQSALIVLMAQIGCFVPAASANIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRN 688
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPT 686
T NSL+I+DE+GRGTSTFDG +A ++ +A ++ TLFATH+HE+ L I
Sbjct: 689 ATGNSLLILDEIGRGTSTFDGLAIAWAVTEFVADTKKIGAKTLFATHYHELTELEGKIAG 748
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N ++ E+ D++V L ++ G KSYG+ A++AG PE +L +A+DL+++ + D
Sbjct: 749 VHNYCIAVKEKGDDIVFLRKIVQGGADKSYGIQVARLAGVPEPVLARAKDLVEQLSKA-D 807
Query: 747 TKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKDTNRIL 793
D + + K V++ Y D Q +SL +D NRI+
Sbjct: 808 ITAAVSDIASTK-----KKVKKTHYDTVDMQQ--MSLFDTRDDNRII 847
>gi|419509158|ref|ZP_14048806.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA49542]
gi|379609449|gb|EHZ74187.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA49542]
Length = 844
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 315/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A + L ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKAGLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|342164735|ref|YP_004769374.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
gi|341934617|gb|AEL11514.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
Length = 844
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 322/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKENFEDLHLLDSRLATVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + + + R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLGHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +DK + L E T + A + T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDDTLDKYRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHERIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P D+L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-NQGTESPA 793
>gi|335030594|ref|ZP_08524082.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
gi|334265885|gb|EGL84376.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
Length = 843
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 204/722 (28%), Positives = 337/722 (46%), Gaps = 91/722 (12%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +DL T FY+ E+ D L+ E N ++V
Sbjct: 139 GLAYMDLVTGDFYVTELSDF-----------------SLVCGEIRNLKAREVV------- 174
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
G E E+ L + +N ++ ++ ++ LL + L+ Y+
Sbjct: 175 ---IGYDLPEVEEQILSRQMNLVLSYEQGTYEDLHLLDSQLASVEEAASSKLLQYVHRTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + ++ M A +SL ++ + + S + SL +L +T G R
Sbjct: 232 MRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLAETKTAMGMR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+++PL D + I+ER V + ++ R +L E +L+G+ D++ LA R+ K+
Sbjct: 290 LLRSWIQRPLIDKERILERQEVVQVFLDYFFERSDLTE-SLKGVYDIERLASRVSFGKSN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK------ 378
KD ++ + +P++ +ILE + Q A L+ I L +L S +
Sbjct: 349 PKDLLQLATTLGSVPRIRAILEGMEQPALAYLIEQLDAIPELENLISAAIAPEAPHVITE 408
Query: 379 --------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKL 421
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 409 GGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGIHTLKIDYNKKDGYYFHVTNSQ 468
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVE 469
++ + T++ RF + LA +AN +Y+ R I E
Sbjct: 469 LGNVPAHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IRE 520
Query: 470 EVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS-LVLNQCR 528
EV Y Q L L+ +A DVL ++ + +RP G S + + R
Sbjct: 521 EV----GKYIQRLQALAQGIATVDVLQGLAV--VAEKQHLIRP---EFGEESRIAIQNGR 571
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++V +AQ+G +VP
Sbjct: 572 HAVVEKVMGAQTYIPNSIQMDE-DASIQLITGPNMSGKSTYMRQLAITVIMAQMGSYVPA 630
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
+SA + + D IFTR+GAAD G STFM+EM E I TE+SL++ DELGRGT+T+
Sbjct: 631 ESARLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATEDSLILFDELGRGTATY 690
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + H TLFATH+HE+ L + NV V+ LEQ + L+++
Sbjct: 691 DGMALAQSIIEYIHEHIGAKTLFATHYHELTSLEASLEHLVNVHVATLEQNGQVTFLHKI 750
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-YSLDTKTPSGDETNNREEEYFKTV 766
+PG KSYG+H AK+AG P D+L +A ++ + E ++ P+ T N + F
Sbjct: 751 EPGPADKSYGIHVAKIAGLPADLLARADAILTQLESQGQESPIPTKQNTVNEQMSLFDEK 810
Query: 767 QE 768
+E
Sbjct: 811 EE 812
>gi|117924747|ref|YP_865364.1| DNA mismatch repair protein MutS [Magnetococcus marinus MC-1]
gi|189083157|sp|A0L7L5.1|MUTS_MAGSM RecName: Full=DNA mismatch repair protein MutS
gi|117608503|gb|ABK43958.1| DNA mismatch repair protein MutS [Magnetococcus marinus MC-1]
Length = 868
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 272/525 (51%), Gaps = 44/525 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLLG++DRC TP G RLLAQW+ +PL+ LDAI R +V+ L N A +L E LR +
Sbjct: 290 SLLGVMDRCITPMGSRLLAQWINRPLQSLDAIATRQESVSWLRENLVAYQDLRER-LRMV 348
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL----------------------- 350
D++ RI ++A +D + + + LP+L +IL
Sbjct: 349 HDLERFLSRIALRRASPRDLGGLRQTLQCLPQLYAILTPADGHSLAVPSLLRILADHFNG 408
Query: 351 -ESLVQNVE---ASNLNTILSSLQSLKM-----MDRKDAVMDKMKEYL---ESTARRLNL 398
E+L + +E A L L +++++ +D ++ K YL E R
Sbjct: 409 HEALTKQLEQQLADELPLNLKEGETIRLGFDQTLDTLRSLSRDGKSYLTKLEVEEREKTG 468
Query: 399 VADKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
+ IK S G++ +T + + RY T+ GVR+ + L Q +
Sbjct: 469 IPSLKIKYHRS-FGYSMEVTKTHLDKVPPRYIQRQTMTNGVRYVTEELKEYEEQLLTAEE 527
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+Q + E + A +TL + +A DVL +F A + Y RP +
Sbjct: 528 RMLEREQLLFEALAEQVARQAETLQASARAIATLDVLANF--AHIAEERNYCRPLLH--- 582
Query: 519 TGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
G+++ +NQ RHP+VE ++ ND+ + + + L+TGPNM GKST +R + + V
Sbjct: 583 EGAVIEINQGRHPVVEQFSDTPFVANDIRLDNRQRT-GLITGPNMAGKSTLMRQVALIVL 641
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA G VP SA I VD+IFTRVGA+D G STFM+EM ETA ++ +E SLVI+
Sbjct: 642 LAHTGACVPAGSAKIGRVDRIFTRVGASDDLAGGRSTFMVEMTETAHILHHASERSLVIL 701
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A ++A + + Q TLFATH+HE+ L + N+ V E
Sbjct: 702 DEIGRGTSTYDGLSIAWAVAEHIHTQCQARTLFATHYHELTQLESQLDGVFNLTVEVKEW 761
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+D ++ L+ + G+ +SYG+H A++AG P + +AR+++ + E
Sbjct: 762 KDQILFLHTIVRGAADRSYGIHVAQLAGLPRAVTRRAREVLADLE 806
>gi|421218814|ref|ZP_15675701.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070335]
gi|395581411|gb|EJG41882.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070335]
Length = 717
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 315/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 42 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 101
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 102 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 159
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 160 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 218
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 219 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDAIPELESLISAAIAPEAPHV 278
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 279 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 338
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 339 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 390
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + ++P G S + +
Sbjct: 391 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIQP---EFGDDSQIDIR 441
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 442 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 500
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 501 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 560
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 561 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 620
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 621 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 658
>gi|418147325|ref|ZP_12784097.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13637]
gi|353810405|gb|EHD90656.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA13637]
Length = 844
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 315/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + ++P G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIQP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|417846878|ref|ZP_12492862.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1073]
gi|339457998|gb|EGP70551.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1073]
Length = 844
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 188/647 (29%), Positives = 320/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL + L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLASVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQN-----VEASNLNTILSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q +E + L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALTYLIEQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQGGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P D+L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-NQGTESPA 793
>gi|365853736|ref|ZP_09394001.1| DNA mismatch repair protein MutS [Lactobacillus parafarraginis
F0439]
gi|363711894|gb|EHL95600.1| DNA mismatch repair protein MutS [Lactobacillus parafarraginis
F0439]
Length = 865
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 268/520 (51%), Gaps = 38/520 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD+ +T G R L QW+++PL + I ERH AV +L+++ R L + ++ +
Sbjct: 271 TLLWLLDQTKTAMGGRKLKQWIERPLVNRTRIEERHDAVGVLLDHYYERNQLQDELIK-V 329
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL--------------VQNVEA 359
D++ LA RI +D ++ + Q+PK+ ILE + + +V A
Sbjct: 330 YDLERLAGRIAFGSVNGRDLIQLKTSLKQVPKIKYILEQIADKSFKDMLDNLVPLDDVVA 389
Query: 360 SNLNTILSSLQSLKMMDR---KDAVMDKMKEYLESTARRLNLVAD------KTIKLENSP 410
+ N I+ + + D KD D++ +Y ++T +AD K + N
Sbjct: 390 TIENAIVEQ-PPISVTDGGVIKDGFDDQLDKYRDATKNGQKWLADLEAKERKVTGVNNLK 448
Query: 411 QGF----AYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
GF Y I + L+ DRY T+ RF L Q + +
Sbjct: 449 VGFNHVFGYYIEVTKTNLDKIPADRYQRKQTLANAERFSTPELKEKEALILEAQEQSKVL 508
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+ + V + + L+D +A DVL SF AS +V+P K +
Sbjct: 509 EYQLFVNVRDQIKASIKQIQALADAVASVDVLQSF--ASVSEEYRFVKP--KLTTQHKIA 564
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
+ RHP+VE + G Y+PNDV S + S L+TGPNM GKSTY+R + + V + Q+G
Sbjct: 565 IKDGRHPVVEKVLGHQQYVPNDVDMGS-DTSVLLITGPNMSGKSTYMRQVALGVIMNQMG 623
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVP SAT+ V D+IFTR+GAAD G STFM+EMKE I+ T NSL++ DE+GR
Sbjct: 624 CFVPAKSATLPVFDKIFTRIGAADDLISGQSTFMVEMKEANDAIENATPNSLILFDEIGR 683
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + ++ TLF+TH+HE+ L + +NV V A E LV
Sbjct: 684 GTATYDGMALAQAIIEYVHNNIGAKTLFSTHYHELTSLDETLNRLQNVHVGATESNGELV 743
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L++++PG KSYG+H AK+AG P +L +A ++ E
Sbjct: 744 FLHKIQPGPADKSYGIHVAKLAGLPNGLLNRANQILTGLE 783
>gi|432329250|ref|YP_007247394.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
gi|432135959|gb|AGB05228.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
Length = 829
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 200/688 (29%), Positives = 336/688 (48%), Gaps = 81/688 (11%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G A +D+ T +F+ GE+ D+Y + I++ SP E + E D KI+
Sbjct: 131 TYGFAALDISTGEFFAGEL---DFYG-INGEILRLSPAEIISNVELKVDVPQKIMP---- 182
Query: 148 NKVCMTGRKKNEFSE-EDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ +S+ E L++D F +E++ + A + N +
Sbjct: 183 ---------EEYYSDYESLLKD-----HFKVAEIEGFGIGKYGLKAAAAALKYAKENTMS 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ N ++ + +++ + S + +L V + + Y +L ++ C TP
Sbjct: 229 ELKNITSLQGYF-----RDRFLILDSTTLKNLEVF--KNFLGEERY-TLFFTINACVTPM 280
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY--ALRGLPDMQSLAMRIG 324
G RLL +WM++PLK++D I +R AV L T+ +M L L + D++ + RI
Sbjct: 281 GSRLLKRWMQRPLKNVDEIEKRQDAVEEL---TKKQMMLESIRDVLSHIKDLERIKTRIS 337
Query: 325 RKKAGLKDCYRVYEG----------------------VSQLPKLISILESLV-------Q 355
+A KD + EG + L K++ ++E +
Sbjct: 338 LGRARPKDLIALKEGLKYAQDLKMNFESKILREESEKIEGLGKIVDLIERSIAGDYPIGD 397
Query: 356 NVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFA 414
V + L SL+ L + ++ KM+E RR + K++K+ N G+
Sbjct: 398 GVIKRGYSRELDSLRDLTL--HAQDLIGKMEE---RERRRTGI---KSLKIGYNDVMGYY 449
Query: 415 YRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
++ + + D Y T++ RF D L + + + + +Q++ EE+I
Sbjct: 450 IEVSKANLSKVPDHYKRKQTLKNSERFITDELKDLEYRILSAKEKINDIEQALYEEIIEK 509
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVEL 534
G T + ++++ +A D + S +A Y RP + + + + RHP+VE
Sbjct: 510 LKGETSRIARVAEAIAHIDTIQS--LAKVALEWNYTRPIVDE--SMDIAIKNGRHPVVER 565
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
++PND SGE F ++TGPNM GKSTY+R + + LAQ+G FVP D A I V
Sbjct: 566 Y--TDFVPNDTNI-SGEARFIMLTGPNMAGKSTYMRQVALITILAQMGSFVPADYAKIGV 622
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
VD+I+TRVGA+D RG STFMMEM E A ++ TE SL+++DE+GRGTST+DG +A
Sbjct: 623 VDRIYTRVGASDDITRGRSTFMMEMVELANILNTATERSLILLDEIGRGTSTYDGLAIAW 682
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
SI + + + T+FATH+H + L V+ RN ++ E D LV + +V PG K
Sbjct: 683 SITEHIHNKIKARTIFATHYHHLIELENVLENVRNYHIAVKETPDGLVFVRKVMPGGMSK 742
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+ AK+AG PED++++A+++++ E
Sbjct: 743 SYGIEVAKLAGVPEDVVKRAKNVLEMIE 770
>gi|417940025|ref|ZP_12583313.1| DNA mismatch repair protein MutS [Streptococcus oralis SK313]
gi|343388906|gb|EGV01491.1| DNA mismatch repair protein MutS [Streptococcus oralis SK313]
Length = 844
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 187/647 (28%), Positives = 320/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALGYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQTLAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAITAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +S + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESTHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQE + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLGSSLEHLVNVHVATLEQEGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P ++L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLE-NQGTESPA 793
>gi|401682709|ref|ZP_10814599.1| DNA mismatch repair protein MutS [Streptococcus sp. AS14]
gi|400183949|gb|EJO18196.1| DNA mismatch repair protein MutS [Streptococcus sp. AS14]
Length = 849
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 191/656 (29%), Positives = 322/656 (49%), Gaps = 64/656 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I++R V + +++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARIIQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEA-SNLNTILSSLQSL----- 372
K KD ++ + +P++ +IL+ L++ ++ S L ++SS S
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPISELAGLISSAISPDAPHI 405
Query: 373 ------------KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRI 417
+ +D+ V+ + + LE R + +++ I N G+ + +
Sbjct: 406 ITEGNIIQTGFDETLDQYRLVLREGTGWIAELEVKERANSGISNLKIDY-NKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQ 465
T + + T++ RF + LA +AN +Y+ R
Sbjct: 465 TNSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR------- 517
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
I EE + Y Q L L+ LA DVL SF A+ + VRP L +
Sbjct: 518 -IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPVFT--AERRLQIE 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT
Sbjct: 628 VPAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++ + L
Sbjct: 688 ATYDGMALAQAIIEHIHHYTGAKTLFATHYHELTTLEDSLEHLENVHVATLEKDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREE 760
++++PG KSYG+H AK+AG PE +LE+A +++ E S DT S T +R++
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPEKLLERADNILSHLE-SQDTGLGSELPTESRQK 802
>gi|312870460|ref|ZP_07730580.1| DNA mismatch repair protein MutS [Lactobacillus oris PB013-T2-3]
gi|311094017|gb|EFQ52341.1| DNA mismatch repair protein MutS [Lactobacillus oris PB013-T2-3]
Length = 884
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 181/564 (32%), Positives = 287/564 (50%), Gaps = 64/564 (11%)
Query: 218 SIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
S ID+ Y + +M++L +QG+ S +LD +T G RLL +W+ +
Sbjct: 250 SFMKIDH--YSKTNLELMTNLRSGKRQGTLS--------WLLDETKTAMGSRLLKRWLDR 299
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL D AI ER V L+++ R NL E ++ + D++ LA R+ +D ++
Sbjct: 300 PLIDPAAIKERQDKVAELLDHYFERSNLQEELIK-VYDLERLAGRVAYGSVNGRDLIQLK 358
Query: 338 EGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK-MMDR----------------KDA 380
+ Q+PK+ +LE+L V ++L + L L + ++DR KD
Sbjct: 359 TSLEQVPKIKYVLETLDSPV-FTDLTSRLDPLTDIADLIDRAIVEEPPIAVTDGGVIKDG 417
Query: 381 VMDKMKEYLESTARRLNLVAD------KTIKLENSPQG----FAYRI---TMKLNNSIDD 427
D++ +Y ++ +AD + + N G F Y I + L+ D
Sbjct: 418 YNDQLDQYRDAMNNGKQWIADLQEQERQVTGINNLKIGYNHVFGYFIEVTKVNLDKIPRD 477
Query: 428 RYTILDTVRGGVRFQDDRLATA-----NTQYQAIQREYETH---QQSIVEEVIGISAGYT 479
RY T+ RF L Q +++ EY+ ++ + E++
Sbjct: 478 RYERKQTLVNAERFSTPELKEKEALILGAQEKSVALEYDLFVKIREQVKEQI-------- 529
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
Q L +L+ L++ DVL SF++ S +VRP M L + RHP+VE G
Sbjct: 530 QRLQKLAQALSELDVLQSFAVVSEDYH--FVRPIMN--SGHQLQIKDGRHPVVEKFMGHQ 585
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
Y+PNDV + L+TGPNM GKSTY+R + ++ +AQ+GCFVP A + + DQI
Sbjct: 586 EYVPNDVQM-GDDTDILLITGPNMSGKSTYMRQLALTAVMAQMGCFVPASRAELPIFDQI 644
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E + T+ SL++ DE+GRGT+T+DG +A +I
Sbjct: 645 FTRIGAADDLISGESTFMVEMMEANNALSHATDRSLILFDEIGRGTATYDGMALAQAIIE 704
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ H + TLF+TH+HE+ L +P +NV V A+E+ LV L++V G KSYG+
Sbjct: 705 YVHQHVRAKTLFSTHYHELTSLEETLPRLKNVHVGAMEKNGELVFLHKVSAGPADKSYGI 764
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P +L++A ++++ E
Sbjct: 765 HVAKLAGMPVPLLKRADQILQKLE 788
>gi|306826023|ref|ZP_07459359.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304431739|gb|EFM34719.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 844
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 188/647 (29%), Positives = 321/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSHQMNLVLSYEKEGFEDLHLLDPRLADVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNSIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P ++L +A ++ + E + T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPAELLARADKILAQLE-NQGTESPA 793
>gi|157150901|ref|YP_001451304.1| DNA mismatch repair protein MutS [Streptococcus gordonii str.
Challis substr. CH1]
gi|189083199|sp|A8AZU4.1|MUTS_STRGC RecName: Full=DNA mismatch repair protein MutS
gi|157075695|gb|ABV10378.1| DNA mismatch repair protein MutS [Streptococcus gordonii str.
Challis substr. CH1]
Length = 847
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 290/570 (50%), Gaps = 71/570 (12%)
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+H + ++ M A +SL + + + + + + SL ++D +T G RLL W++ P
Sbjct: 241 VHHYEIKDFLQMDYATKTSLDL--TENARTGKKHGSLFWLMDETKTAMGGRLLRSWIQHP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D I++R V + ++ R +L + +L+G+ D++ L R+ K KD ++
Sbjct: 299 LIDKGRIIKRQDVVQVFLDYFFERSDLAD-SLKGVYDIERLVSRVSFGKTNPKDLLQLAS 357
Query: 339 GVSQLPKLISILESLVQNVEASNLNTILSSLQSL-------------------------- 372
+S +P++ SILE+ +E+ L ++++ L ++
Sbjct: 358 TLSHVPQIRSILET----IESPALESLVARLDAIPELENLISSAIDPDAPQVITEGNIIR 413
Query: 373 ----KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSI 425
+ +D+ VM + ++ E+ R + + + I N G+ + +T ++
Sbjct: 414 TGFDETLDQYRLVMREGTSWIADIEAKEREASGITNLKIDY-NKKDGYYFHVTNSQLGNV 472
Query: 426 DDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIG 473
+ T++ RF + LA +AN +Y+ R I EEV
Sbjct: 473 PSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREEV-- 522
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE 533
Y Q L L+ LA DVL SF++ + + VRP + SL + + RH +VE
Sbjct: 523 --GKYIQRLQALAQTLATVDVLQSFAVVAES--QHLVRPSFT--SSRSLQIKKGRHAVVE 576
Query: 534 -LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATI 592
+ G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +VP + A++
Sbjct: 577 KVMGAQSYIPNSIELDQ-ETDIQLITGPNMSGKSTYMRQLAMIVIMAQMGSYVPAEVASL 635
Query: 593 SVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGM 652
+ D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+T+DG +
Sbjct: 636 PIFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTATYDGMAL 695
Query: 653 ACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSC 712
A +I + + TLFATH+HE+ LS + NV V+ LE++ + L++++ G
Sbjct: 696 AQAIIEYIHDRTKAKTLFATHYHELTDLSSSLTRLENVHVATLEKDGQVTFLHKIEAGPA 755
Query: 713 VKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 756 DKSYGIHVAKIAGLPTDLLRRADAILTDLE 785
>gi|300811157|ref|ZP_07091669.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497861|gb|EFK32871.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 856
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 207/705 (29%), Positives = 340/705 (48%), Gaps = 73/705 (10%)
Query: 92 AIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAE------------YLNDNKN 139
I+ L T M + PDD +N +V+K+ L ++ + + N
Sbjct: 105 GIIQLVTPGTKMAQGPDDSQENNYLTSVVEKAGGYGLAYSDLSTGEIFATHVKHYAEVVN 164
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN-----ARLLPEMCLTTA 194
+++++ R +V + G K S+ D +Q N V + +EL+ + + ++ +
Sbjct: 165 ELLSLRTR-EVVLAG--KLSASDRDRLQKANITVS-EPAELEGEHAEISYVQQKLTDSME 220
Query: 195 THCLRSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
+R L+ YL L + ++ + S + +Y+ M++ V +L + Q +T+ +
Sbjct: 221 KAAVRQLVVYL-LATQKRSLAHLQVAESFEIGQYLQMANTVQRNLEL--TQSATTGRKQG 277
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SL +LD+ T G RLL QW+ +PL LD I +R V L+++ R N+ + +L+G+
Sbjct: 278 SLFWVLDKTTTAMGGRLLKQWLSRPLLSLDRIKQRQQMVQALLDDYFTRENIVD-SLKGV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL--------ESLVQNVEASN--LN 363
D++ L+ R+ ++ ++ + + +I L E Q ++ +
Sbjct: 337 YDLERLSGRVAFGNVNPRELLQLAKSLEATKPIIQALAESGNPDLEKYGQGIDPQSELAE 396
Query: 364 TILSSLQSLKMMDRKDAV---------MDKMKEYLESTAR---RLNLVADKTIKLENSPQ 411
+I + L + KD +DK +E + + ++ + + ++N
Sbjct: 397 SITNCLVDQPPISAKDGGIIRAGVSEDLDKYREAMNGGKKWLAQMEMEERQRTGIDNLKI 456
Query: 412 G----FAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLAT-ANTQYQAIQR----E 459
G F Y I + N DRYT T+ R+ L N +A R E
Sbjct: 457 GYNRVFGYFIQVSKGNVAKVPQDRYTRKQTLTNAERYITPELKEHENLILEAESRSTDLE 516
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
YE Q + E + + L +L LA DV V+F A K Y RP
Sbjct: 517 YELFSQ--LREAV---KAHIPALQELGRQLAALDVFVAF--AQDAEEKNYCRPSFS--SK 567
Query: 520 GSLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE L G SYIPND+ + S L+TGPNM GKSTY+R + +
Sbjct: 568 NEIAVKNGRHPVVEAVLPAG-SYIPNDLVMDE-DTSIYLITGPNMSGKSTYMRQLALIAI 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQIG FVP DSA + V DQ+FTR+GAAD Y G STFM+EM E ++ + SLV+
Sbjct: 626 MAQIGSFVPADSAKLPVFDQVFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGT+T+DG +A +I + L TLFATH+HE+ L +P +N+ V A E+
Sbjct: 686 DEIGRGTATYDGMALAGAIIKYLHDKVGAKTLFATHYHELTELDETLPHLKNIHVGATEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L+++ PG +SYG+H AK+AG P +L +A ++K E
Sbjct: 746 NGQLIFLHKILPGPADQSYGIHVAKLAGLPRAVLREASSMLKRLE 790
>gi|401683891|ref|ZP_10815776.1| DNA mismatch repair protein MutS [Streptococcus sp. BS35b]
gi|418975559|ref|ZP_13523463.1| DNA mismatch repair protein MutS [Streptococcus oralis SK1074]
gi|383347542|gb|EID25520.1| DNA mismatch repair protein MutS [Streptococcus oralis SK1074]
gi|400186931|gb|EJO21136.1| DNA mismatch repair protein MutS [Streptococcus sp. BS35b]
Length = 844
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 319/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDPRLADVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAEI--QHLIRP---EFGDDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLGSSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P ++L +A ++ + E S T+ P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLE-SQGTEGPA 793
>gi|405760048|ref|YP_006700644.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPNA45]
gi|404276937|emb|CCM07423.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae SPNA45]
Length = 844
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARLGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREESANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>gi|386587200|ref|YP_006083602.1| DNA mismatch repair protein MutS [Streptococcus suis D12]
gi|353739346|gb|AER20354.1| DNA mismatch repair protein MutS [Streptococcus suis D12]
Length = 846
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 189/635 (29%), Positives = 317/635 (49%), Gaps = 57/635 (8%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + + G +E E+ +N L+ F+D ++ +L+ L++YL
Sbjct: 169 RARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKAAAGKLLSYLH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
D + + + Y+ M A SSL +L + + + + SL +LD +T
Sbjct: 229 RTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLL--ENGRTGKKHGSLYWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL DL I R A V + ++ R +L E AL+G+ D++ LA R+
Sbjct: 287 GMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESL----VQNVEAS-----NLNTILSS--------- 368
K KD ++ + + +P + +IL+ + + N+ A L+ ++SS
Sbjct: 346 KTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHALISSAIDPEAQGT 405
Query: 369 --------------LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGF 413
L +++ R+ A E E A +N +K++ N G+
Sbjct: 406 ITDGNIIRTGFDETLDQYRLVMREGAGWIAEIEAKEREASGIN-----NLKIDYNKKDGY 460
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIV 468
+ +T ++ D + T++ R+ + LA Q ++ EYE + I
Sbjct: 461 YFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMR-IR 519
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+EV Y L +L+ +A DVL +F++ A + ++ C + L +++ R
Sbjct: 520 QEV----EKYIGRLQKLARTIATIDVLQAFAV---VAEQQHL-VCPRFTDQRELTIDRGR 571
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN ++ + + L+TGPNM GKSTY+R + V V +AQ+G +VP
Sbjct: 572 HAVVEKVMGKQTYIPNSIHLNT-DTHMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPA 630
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D IFTR+GAAD G STFM+EM E ++ T+ SL++ DELGRGT+T+
Sbjct: 631 DQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATY 690
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + TLFATH+HE+ LS+ + NV VS LE++ + L+++
Sbjct: 691 DGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKI 750
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
G KSYG+H AK+AG PE++LE+A +++ E
Sbjct: 751 AQGPADKSYGIHVAKIAGMPEELLERADRILQTLE 785
>gi|251783479|ref|YP_002997784.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242392111|dbj|BAH82570.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 851
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 180/617 (29%), Positives = 310/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES + L + SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESF-NSAYVDKLVNDIDSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S +A+ Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQS--LAAVAETNHYIRPQFN--DNHVIKIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F E S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFNQ-ETSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTMFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
PE +L +A +++ E
Sbjct: 769 LPEALLSRADEVLTRLE 785
>gi|417752051|ref|ZP_12400291.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333772185|gb|EGL49058.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 851
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 180/617 (29%), Positives = 310/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES + L + SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESF-NSAYVDKLVNDIDSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S +A+ Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQS--LAAVAETNHYIRPQFN--DNHVIKIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F E S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFNQ-ETSIQLITGPNMSGKSTYMRQLALTVIMAQMGLFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTMFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
PE +L +A +++ E
Sbjct: 769 LPEALLSRADEVLTRLE 785
>gi|313124269|ref|YP_004034528.1| DNA mismatch repair protein muts [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|422844178|ref|ZP_16890888.1| DNA mismatch repair protein HexA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|312280832|gb|ADQ61551.1| DNA mismatch repair protein mutS [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325685683|gb|EGD27762.1| DNA mismatch repair protein HexA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 856
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 289/583 (49%), Gaps = 52/583 (8%)
Query: 197 CLRSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
+R L+ YL L + ++ + S + +Y+ M++ V +L + Q +T+ + SL
Sbjct: 223 AVRQLVVYL-LATQKRSLAHLQVAESFEIGQYLQMANTVQRNLEL--TQSATTGRKQGSL 279
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+LD+ T G RLL QW+ +PL LD I +R V L+++ R N+ + +L+G+ D
Sbjct: 280 FWVLDKTTTAMGGRLLKQWLSRPLLSLDRIKQRQQMVQALLDDYFTRENIVD-SLKGVYD 338
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL--------ESLVQNVEASN--LNTI 365
++ L+ R+ ++ ++ + + +I L E Q ++ + +I
Sbjct: 339 LERLSGRVAFGNVNPRELLQLAKSLEATKPIIQALAESGNPDLEKYGQGIDPQSELAESI 398
Query: 366 LSSLQSLKMMDRKDAV---------MDKMKEYLESTARRL---NLVADKTIKLENSPQG- 412
+ L + KD +DK +E + + L + + ++N G
Sbjct: 399 TNCLVDQPPISAKDGGIIRAGVSEDLDKYREAMNGGKKWLAQMEMEERQRTGIDNLKIGY 458
Query: 413 ---FAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLAT-ANTQYQAIQR----EYE 461
F Y I + N DRYT T+ R+ L N +A R EYE
Sbjct: 459 NRVFGYFIQVSKGNVAKVPQDRYTRKQTLTNAERYITPELKEHENLILEAESRSTDLEYE 518
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q + E + + L +L LA DV V+F A K Y RP
Sbjct: 519 LFSQ--LREAV---KAHIPALQELGRQLAALDVFVAF--AQDAEEKNYCRPSFS--SKNE 569
Query: 522 LVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
+ + RHP+VE L G SYIPND+ + S L+TGPNM GKSTY+R + + +A
Sbjct: 570 IAVKNGRHPVVEAVLPAG-SYIPNDLVMDE-DTSIYLITGPNMSGKSTYMRQLALIAIMA 627
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
QIG FVP DSA + V DQ+FTR+GAAD Y G STFM+EM E ++ + SLV+ DE
Sbjct: 628 QIGSFVPADSAKLPVFDQVFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDE 687
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+T+DG +A +I + L TLFATH+HE+ L +P +N+ V A E+
Sbjct: 688 IGRGTATYDGMALAGAIIKYLHDKVGAKTLFATHYHELTELDETLPHLKNIHVGATEENG 747
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L+++ PG +SYG+H AK+AG P +L +A ++K E
Sbjct: 748 QLIFLHKILPGPADQSYGIHVAKLAGLPRAVLREASSMLKRLE 790
>gi|386317938|ref|YP_006014102.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|323128225|gb|ADX25522.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 851
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/617 (29%), Positives = 310/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALIHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES + L + SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESF-NSAYVDKLVNDIDSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S +A+ Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQS--LAAVAETNHYIRPQFN--DNHVIKIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F E S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFNQ-ETSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTMFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
PE +L +A +++ E
Sbjct: 769 LPEALLSRADEVLTRLE 785
>gi|313890364|ref|ZP_07823995.1| DNA mismatch repair protein MutS [Streptococcus pseudoporcinus SPIN
20026]
gi|416851473|ref|ZP_11908618.1| DNA mismatch repair protein MutS [Streptococcus pseudoporcinus LQ
940-04]
gi|313121207|gb|EFR44315.1| DNA mismatch repair protein MutS [Streptococcus pseudoporcinus SPIN
20026]
gi|356738962|gb|EHI64194.1| DNA mismatch repair protein MutS [Streptococcus pseudoporcinus LQ
940-04]
Length = 849
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 190/686 (27%), Positives = 330/686 (48%), Gaps = 72/686 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +F++ + D ++NL + I+ KE +L
Sbjct: 139 GLSYMDLATGEFFVTSLTD---FTNLSSEILNLKAKEVIL-------------------- 175
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
G + NE E+ L QD N L+ + DS +N+ LL L+ Y+
Sbjct: 176 ----GFELNEDQEKQLKQDSNLLLSYSDSCCENSDLLSPQLAPIELRVAGKLLAYVHQTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ + +SL +L + + + + + SL +LD +T G R
Sbjct: 232 MRELSHLQKVSHYEIKDYLQMTYSTKASLDLL--ENARTGKKHGSLYWLLDETKTAMGMR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL AI +R + ++N R +L + +L+G+ D++ L+ R+ K
Sbjct: 290 LLRTWIDRPLIHQAAIEKRQRIIQTFLDNFIERADLSD-SLKGVYDIERLSSRVSFGKVN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR------------ 377
KD ++ + ++++P + ++LES+ +++L ++ + ++ ++
Sbjct: 349 PKDLLQLGQTLARVPYIKAVLESMT----STDLGELVDQIDTIPELENLIRSAIDPEAQA 404
Query: 378 --------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRI 417
+ +++ Y + +AD +K++ N G+ + +
Sbjct: 405 TISEGNIIRTGFDERLDHYRKVMKEGTGWIADIEGKERQASGINNLKIDYNKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
T + + D + T++ R+ LA Q + E + I V
Sbjct: 465 TNSNLSLVPDHFFRKATLKNSERYGTAELAKIEGQMLEAREESAQLEYDIFMRVRAQVET 524
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGG 537
Y L L+ +A DVL S +A YV P +V RH +VE G
Sbjct: 525 YIARLQSLAKAIATVDVLQS--LAHVAEQNHYVCPQFNQDKEVRIV--DGRHAVVEKVMG 580
Query: 538 V-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
V YIPN ++ + +VS L+TGPNM GKSTY+R + ++V +AQ+G +V D A + + D
Sbjct: 581 VREYIPNSIHL-TDQVSIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVSADQANLPLFD 639
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E I++ ++NSL++ DELGRGT+T+DG +A SI
Sbjct: 640 AIFTRIGAADDLISGQSTFMVEMMEANQAIQRASQNSLILFDELGRGTATYDGMALAQSI 699
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ TLFATH+HE+ LS + +NV V+ LE+ + L+++ G KSY
Sbjct: 700 IEYIHDRVGAKTLFATHYHELTALSSQLEGLQNVHVATLERGGEVTFLHKISEGPADKSY 759
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
G+H AK+AG PE +L +A +++E E
Sbjct: 760 GIHVAKIAGLPEGLLSRAGHILEELE 785
>gi|408402568|ref|YP_006860532.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|417928022|ref|ZP_12571410.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765896|gb|EGR88422.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407968797|dbj|BAM62035.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 851
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/617 (29%), Positives = 310/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFNSPFVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S +A+ Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQS--LAAVAETNHYIRPQFN--DNHVIKIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F E S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFNQ-ETSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTMFATHYHELTELSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
PE +L +A +++ E
Sbjct: 769 LPEALLSRADEVLTRLE 785
>gi|335032075|ref|ZP_08525484.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK52 =
DSM 20563]
gi|333767941|gb|EGL45156.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK52 =
DSM 20563]
Length = 855
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/576 (30%), Positives = 295/576 (51%), Gaps = 63/576 (10%)
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+H + ++ M + M+SL + + + + + + SL ++D +T G RLL W+++P
Sbjct: 243 VHHYEIKDFLQMDYSTMASLDL--TENARTGKKHGSLYWLMDDTKTAMGTRLLRAWIQRP 300
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D + IV+R V + +++ R +L + L+G+ D++ LA R+ K KD ++
Sbjct: 301 LIDKERIVKRQDVVQVFLDHFFERSDLSD-TLKGVYDIERLASRVSFGKTNPKDLLQLAA 359
Query: 339 GVSQLPKLISILE---------------------SLVQNVEASNLNTILSSLQSLKM--- 374
+S +P++ IL+ SL+Q+ + + + +++ +K
Sbjct: 360 TLSHVPQIKGILKGIDSPVLEDLIAKLDEIPELASLIQSAISPDASNVITEGNIIKTGFD 419
Query: 375 --MDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRY 429
+D+ VM ++ E+ R + + + I N G+ + +T + +
Sbjct: 420 ETLDKYRVVMRDGTSWIADIEAKEREASGINNLKIDY-NKKDGYYFHVTNSQLEHVPSHF 478
Query: 430 TILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAG 477
T++ RF + LA +AN +Y+ R I EE +
Sbjct: 479 FRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGK 526
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQG 536
Y + L L+ LA DVL SF A+ + +VRP + S+ +++ RH +VE + G
Sbjct: 527 YIKRLQSLAQTLATVDVLQSF--AAVAEKQHFVRPEF--IEQRSIQIDKGRHAVVEKVMG 582
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
+YIPN + V+ L+TGPNM GKSTY+R + + V +AQ+G +V +SA + + D
Sbjct: 583 AQTYIPNSISMDEN-VNVQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFD 641
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E I + TENSL++ DELGRGT+T+DG +A +I
Sbjct: 642 AIFTRIGAADDLVSGQSTFMVEMMEANHAISQATENSLILFDELGRGTATYDGMALAQAI 701
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ + TLFATH+HE+ LS + NV V+ LE++ + L++++ G KSY
Sbjct: 702 IEYIHNRTGAKTLFATHYHELTELSTSLTQLENVHVATLEKDGQVTFLHKIEVGPADKSY 761
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G+H AK+AG P D+L +A ++ E + K+ G
Sbjct: 762 GIHVAKIAGLPNDLLTRANQILTRLESQANEKSSFG 797
>gi|419778317|ref|ZP_14304210.1| DNA mismatch repair protein MutS [Streptococcus oralis SK10]
gi|383187332|gb|EIC79785.1| DNA mismatch repair protein MutS [Streptococcus oralis SK10]
Length = 844
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 293/567 (51%), Gaps = 64/567 (11%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A +SL ++ + + S + SL +LD +T G RLL W+ +PL D + I+
Sbjct: 249 FLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAMGMRLLRSWIHRPLIDKERII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V + +++ R +L + +L+G+ D++ LA R+ K KD ++ +S +P++
Sbjct: 307 QRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFGKTNPKDLLQLATTLSSVPRI 365
Query: 347 ISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--------------DAVMDKMKE 387
+ILE + Q + L+ I L SL S + D +DK +
Sbjct: 366 RAILEGMEQPALGYLIAQLDAIPELESLISAAIAPEAPHVITEGGIIRTGFDETLDKYRR 425
Query: 388 YLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
L + + K T+K++ N G+ + +T ++ + T++
Sbjct: 426 VLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNS 485
Query: 439 VRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
RF + LA +AN +Y+ R I EEV + Y Q L L+
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYEIFMR--------IREEV----SKYIQRLQALA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVE-LQGGVSYIPND 544
+A DVL S ++ + + +RP G S + + + RH +VE + G +YIPN
Sbjct: 534 QGIATVDVLQSLAVVAET--QHLIRP---EFGEDSQIDIQKGRHAVVEKVMGAQTYIPNT 588
Query: 545 VYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGA 604
+ + S L+TGPNM GKSTY+R + ++ +AQ+G +VP +SA + + D IFTR+GA
Sbjct: 589 IQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGA 647
Query: 605 ADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR 664
AD G STFM+EM E I T++SL++ DELGRGT+T+DG +A SI + H
Sbjct: 648 ADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGTATYDGMALAQSIIEYIHEHI 707
Query: 665 QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMA 724
TLFATH+HE+ L + NV V+ LEQ + L++++PG KSYG+H AK+A
Sbjct: 708 GAKTLFATHYHELTSLESSLEHLVNVHVATLEQNGQVTFLHKIEPGPADKSYGIHVAKIA 767
Query: 725 GYPEDMLEQARDLMKEYEYSLDTKTPS 751
G PE++L +A ++ + E + T++P+
Sbjct: 768 GLPEELLARADKILTQLE-NQGTESPA 793
>gi|385260920|ref|ZP_10039058.1| DNA mismatch repair protein MutS [Streptococcus sp. SK140]
gi|385190193|gb|EIF37642.1| DNA mismatch repair protein MutS [Streptococcus sp. SK140]
Length = 844
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 188/632 (29%), Positives = 313/632 (49%), Gaps = 51/632 (8%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVIGYALTEEEEQILSRQMNLVLSYEQESFEDVHLLDPRLAPIEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVVRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D D I+ER V + ++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKDRILERQEVVQVFLDYFFERGDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K+ KD ++ + +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KSNPKDLLQLATTLGSVPRIRAILEGMQQPALAYLIEQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIVEEVIG 473
++ + T++ RF + LA + ++ EYE + I EEV
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGEMLEAREKSASLEYEIFMR-IREEV-- 522
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPIV 532
Y Q L L+ +A DVL ++ + + +RP G S + + + RH +V
Sbjct: 523 --GKYIQRLQALAQGIATVDVLQGLAVVAEN--QHLIRP---EFGQDSRIDIQKGRHAVV 575
Query: 533 E-LQGGVSYIPNDVYFKSGE-VSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
E + G +YIPN + + GE S L+TGPNM GKSTY+R + ++ +AQ+G +VP +SA
Sbjct: 576 EKVMGAQTYIPNSI--QMGEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESA 633
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
+ + D IFTR+GAAD G STFM+EM E I TE SL++ DELGRGT+T+DG
Sbjct: 634 HLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAIAHATEKSLILFDELGRGTATYDGM 693
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
+A +I + H TLFATH+HE+ L + NV V+ LEQ + L++++PG
Sbjct: 694 ALAQAIIEYIHEHIGAKTLFATHYHELTSLETSLGHLVNVHVATLEQNGQVTFLHKIEPG 753
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+H AK+AG P D+L++A +++ + E
Sbjct: 754 PADKSYGIHVAKIAGLPADLLKRADEILTQLE 785
>gi|430826358|ref|ZP_19444543.1| DNA mismatch repair protein mutS [Enterococcus faecium E0164]
gi|430839373|ref|ZP_19457314.1| DNA mismatch repair protein mutS [Enterococcus faecium E0688]
gi|430858934|ref|ZP_19476552.1| DNA mismatch repair protein mutS [Enterococcus faecium E1552]
gi|430892898|ref|ZP_19484519.1| DNA mismatch repair protein mutS [Enterococcus faecium E1575]
gi|431764986|ref|ZP_19553511.1| DNA mismatch repair protein mutS [Enterococcus faecium E4215]
gi|35367182|gb|AAN85562.1| MutS [Enterococcus faecium]
gi|430445147|gb|ELA54926.1| DNA mismatch repair protein mutS [Enterococcus faecium E0164]
gi|430490831|gb|ELA67327.1| DNA mismatch repair protein mutS [Enterococcus faecium E0688]
gi|430544453|gb|ELA84482.1| DNA mismatch repair protein mutS [Enterococcus faecium E1552]
gi|430555364|gb|ELA94902.1| DNA mismatch repair protein mutS [Enterococcus faecium E1575]
gi|430629626|gb|ELB66021.1| DNA mismatch repair protein mutS [Enterococcus faecium E4215]
Length = 881
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 208/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V LAQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLLAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|410495886|ref|YP_006905732.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410441046|emb|CCI63674.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 851
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/617 (29%), Positives = 310/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFNSPFVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S +A+ Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQS--LAAVAETNHYIRPQFN--DNHVIKIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F E S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFNQ-ETSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTMFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
PE +L +A +++ E
Sbjct: 769 LPEALLSRADEVLTRLE 785
>gi|116493022|ref|YP_804757.1| DNA mismatch repair protein MutS [Pediococcus pentosaceus ATCC
25745]
gi|122265514|sp|Q03EQ7.1|MUTS_PEDPA RecName: Full=DNA mismatch repair protein MutS
gi|116103172|gb|ABJ68315.1| DNA mismatch repair protein MutS [Pediococcus pentosaceus ATCC
25745]
Length = 873
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 272/519 (52%), Gaps = 36/519 (6%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G RLL QW+ +PL I+ R V +LV++ R NL E L +
Sbjct: 280 TLLWLLDETKTAMGGRLLKQWLDRPLIRKKEIISRQDRVQVLVDHFFERSNLQE-ELTKV 338
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQS 371
D++ LA R+ +D ++ + Q+PK+ ILE L + V L + +S +
Sbjct: 339 YDLERLAGRVAFGSVNGRDLIQLKTSLLQIPKVRHILEELSEPVFDDALEHLDPVSDIAE 398
Query: 372 L--KMMDR------------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
L +D KD K+ EY ++ +AD KT+K+
Sbjct: 399 LIQNAIDEDAPISVTDGDIIKDGYHAKLDEYRDAMRNGKKWIADLQAQERATTGIKTLKI 458
Query: 407 E-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
N G+ +T L N + RY T+ RF L +++ +
Sbjct: 459 GYNKVFGYYIEVTRANLANIPEGRYERKQTLTNAERFITPELKEKERIILEAEQKSTDLE 518
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ +E+ + + L L+ +A+ DVL SF++ S +V+P M ++ +
Sbjct: 519 YQLFKEIRELIKKQIERLQDLAKQVAELDVLQSFAVVS--EKYQFVKPTM--TKNHAIEI 574
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP+VE + G SY+PN++ L+TGPNM GKSTY+R + ++V +AQ+GC
Sbjct: 575 KDGRHPVVEKVMGHQSYVPNNIDMDDN-TDILLITGPNMSGKSTYMRQLALTVIMAQMGC 633
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FV AT+ + DQIFTR+GAAD G STFM+EM+E +K T NSLV+ DE+GRG
Sbjct: 634 FVAASEATLPIFDQIFTRIGAADDLISGQSTFMVEMQEANRALKDGTSNSLVLFDEIGRG 693
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A SI + + TLF+TH+HE+ L + + +NV V A+EQ NLV
Sbjct: 694 TATYDGMALAQSIIEFIHQNVHAKTLFSTHYHELTELDQSLEHLKNVHVGAVEQNGNLVF 753
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L++++ G KSYG+H AK+AG P+ +L++A ++++ E
Sbjct: 754 LHKMEDGPADKSYGIHVAKLAGMPDKLLKRASVILEKLE 792
>gi|125625247|ref|YP_001033730.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp.
cremoris MG1363]
gi|389855635|ref|YP_006357879.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp.
cremoris NZ9000]
gi|189083180|sp|A2RP10.1|MUTS_LACLM RecName: Full=DNA mismatch repair protein MutS
gi|124494055|emb|CAL99055.1| DNA mismatch repair protein mutS [Lactococcus lactis subsp.
cremoris MG1363]
gi|300072057|gb|ADJ61457.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 840
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 188/593 (31%), Positives = 306/593 (51%), Gaps = 46/593 (7%)
Query: 185 LLPEMCLTTA--THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
LL E+ TA L+ Y++ D + + + ++ M A SSL +
Sbjct: 203 LLIELSGLTALENQAASKLLAYVKETQMRDLSHLQEVEHYEIKDFLQMDFATKSSLELTA 262
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ + + +L +LD +T G R+L W+ +PL AI +R V + +++ R
Sbjct: 263 NKREN--KKHGTLYWLLDETKTAMGTRMLRSWIDRPLVSNSAIQKRMEIVQVFLDHFFER 320
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ---NVEA 359
+L E AL+G+ D++ LA R+ KA D ++ +S +P + +ILE L + N
Sbjct: 321 SDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAIKNILEVLDEMPLNELR 379
Query: 360 SNLNTI--LSSLQSLKMMDRK--------------DAVMDKMKEYLES-TARRLNLVADK 402
S L+ I LS L + + + + +DK +E LE+ T+ L AD+
Sbjct: 380 SQLDEIPELSGLINSAISENASRTITEGGIIKKGYNVQLDKYREALENGTSWIAKLEADE 439
Query: 403 -------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQ 454
T++++ N G+ + IT NS+ + + T++ RF L T+ +
Sbjct: 440 KAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNSERFGSQEL----TEIE 495
Query: 455 AIQREYETHQQSIVEEV-IGISA---GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
I E S+ ++ +G+ A Y L L+ +A+ D L S S+ + Y+
Sbjct: 496 EIMLEAREKSSSLEYDLFMGLRAETEQYIGRLQALAKTIAEIDCLQSLSV--VAEKQGYI 553
Query: 511 RPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
RP + G+ + + RH +VE + G Y+PND+ + L+TGPNM GKSTY+
Sbjct: 554 RPTLTE-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QTDIQLITGPNMSGKSTYM 611
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R ++V +AQIG FVP ++A + + D IFTR+GA+D+ G STFM+EM E I+K
Sbjct: 612 RQFALTVIMAQIGSFVPAETANLPIFDAIFTRIGASDNLISGESTFMVEMSEANHAIQKA 671
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T SL+I DELGRGT+T+DG +A +I + H TLFATH+HE+ L + + N
Sbjct: 672 TSRSLIIFDELGRGTATYDGMALAQAIIEYVHEHIGAKTLFATHYHELTDLDKELDHLDN 731
Query: 690 VQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE+A ++++ E
Sbjct: 732 VHVATLEQNGNVTFLHKITDGPADKSYGIHVAKIAGLPQTLLERADLILQKLE 784
>gi|94995318|ref|YP_603416.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS10750]
gi|166232145|sp|Q1J489.1|MUTS_STRPF RecName: Full=DNA mismatch repair protein MutS
gi|94548826|gb|ABF38872.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10750]
Length = 851
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 312/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES + L + SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESF-NSAYVDKLVNDIDSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|307705747|ref|ZP_07642592.1| DNA mismatch repair protein MutS [Streptococcus mitis SK597]
gi|307620665|gb|EFN99756.1| DNA mismatch repair protein MutS [Streptococcus mitis SK597]
Length = 844
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 191/647 (29%), Positives = 321/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDFHLLDSRLAAVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + ++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDYFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQN-----VEASNLNTILSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q +E + L SL S +
Sbjct: 346 KTNPKDLLQLAITLSSVPRIRAILEGMEQPALTYLIEQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +DK + L E T + A + T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AKDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P D+L +A ++ + E S ++PS
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-SQGGESPS 793
>gi|331267175|ref|YP_004326805.1| DNA mismatch repair protein MutS [Streptococcus oralis Uo5]
gi|326683847|emb|CBZ01465.1| DNA mismatch repair protein MutS [Streptococcus oralis Uo5]
Length = 844
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 314/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLADVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKTSLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKKRIVQRQDVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIEQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPSHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGEDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNSIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P ++L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLE 785
>gi|366053765|ref|ZP_09451487.1| DNA mismatch repair protein MutS [Lactobacillus suebicus KCTC 3549]
Length = 877
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 271/525 (51%), Gaps = 44/525 (8%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +LL +LD +T G RLL QW+ +PL D +I R V L+++ R NL +
Sbjct: 272 SGKKQGTLLWLLDETKTAMGGRLLKQWLDRPLLDRKSIEGRQDKVQELLDHYFERSNLQD 331
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
L + D++ LA R+ +D ++ + Q+PK+ ILESL V + ++
Sbjct: 332 -ELTKVYDLERLAGRVAYGSVNGRDLIQLKTSLQQIPKVRYILESLNSPV----FDELMK 386
Query: 368 SLQSLK----MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------ 401
L L+ ++D+ KD D++ EY ++ +A
Sbjct: 387 QLDPLEDIVGLLDQSIAEEPPISVTDGGVIKDHYNDRLDEYRDAMKNGKQWIAKLEAQER 446
Query: 402 KTIKLENSPQGF----AYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQ 454
+ + N GF Y I + L+ DDRY T+ RF L T
Sbjct: 447 QNTGINNLKIGFNHVFGYYIEVTKANLDKLPDDRYERKQTLTNAERFSTPELKEKETLIL 506
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
Q + + + +V L +L+ +A+ DVL SF++ S ++RP
Sbjct: 507 EAQDKSTALEYQLFADVRDQVKESIDRLQRLAKRVAELDVLQSFAVVSETYH--FIRPTY 564
Query: 515 KPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
+ L + + RHP+VE G Y+PNDV + + L+TGPNM GKSTY+R +
Sbjct: 565 TK--SHDLEITEGRHPVVEKFMGHQEYVPNDVSMNP-KTNILLITGPNMSGKSTYMRQLA 621
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
++V ++Q+GCFVP A + + DQIFTR+GAAD G STFM+EM+E + +ENS
Sbjct: 622 LTVIMSQMGCFVPAKKAKMPIFDQIFTRIGAADDLISGQSTFMVEMQEANNALVHASENS 681
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVS 693
L++ DE+GRGT+T+DG +A +I + + TLF+TH+HE+ +L + +NV V
Sbjct: 682 LILFDEIGRGTATYDGMALAQAIIEFVHNRVHAKTLFSTHYHELTVLEDTLAELKNVHVG 741
Query: 694 ALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLM 738
A+E+ LV L++V+ G+ +SYG+H AK+AG PE +L++A +++
Sbjct: 742 AVEKNGELVFLHKVEDGAADQSYGIHVAKLAGMPETLLKRANEIL 786
>gi|414084245|ref|YP_006992953.1| DNA mismatch repair protein MutS [Carnobacterium maltaromaticum
LMA28]
gi|412997829|emb|CCO11638.1| DNA mismatch repair protein MutS [Carnobacterium maltaromaticum
LMA28]
Length = 873
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 279/534 (52%), Gaps = 53/534 (9%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ Q +LL +LD +T G RLL QW+ +PL I R A V L+N+ R +L+E
Sbjct: 274 NGQKKGTLLWLLDETKTAMGGRLLKQWIDRPLIQEQKIKGRQAIVESLMNHFFERTDLNE 333
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
AL + D++ LA R+ +D ++ + Q+P+LI I+ +++ + E +T+L
Sbjct: 334 -ALTRVYDLERLAGRVAFGNVNGRDLLQLKTSLLQIPQLIEII-AIINDTE---WDTLLG 388
Query: 368 SLQS-----------------LKMMDR---KDAVMDKMKEYLESTARRLNLVAD------ 401
+L L + D KD +K+ +Y ++ +A
Sbjct: 389 ALDPVTEVVDLIELAIHEDAPLSLKDGGVIKDGYHEKLDQYRDAMRNGKKWMAQLEAEER 448
Query: 402 -----KTIKLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT--- 451
K +K+ N G+ IT L N + Y T+ RF L T
Sbjct: 449 AKTGIKGLKVGYNRIFGYYIEITKANLANLPEGTYERKQTLANAERFITPALKEKETLIL 508
Query: 452 --QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
+ +++ EYE + EV Y + L +L+ +A DVL SF A+ +
Sbjct: 509 EAEEKSMALEYE-----LFAEVRETVKSYIERLQRLAKNVATIDVLQSF--ATVSEKYHF 561
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
++P M G + L + RHP+VE + G +Y+PN V + E L+TGPNM GKSTY
Sbjct: 562 IKPTMT-TGKHEINLLEGRHPVVEKVLGQQTYVPNSVEMTT-ETDILLITGPNMSGKSTY 619
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
+R + ++V +AQ+GCFVP + A + + DQIFTR+GAAD G STFM+EM E ++
Sbjct: 620 MRQLALTVIMAQMGCFVPAEKADLPIFDQIFTRIGAADDLISGQSTFMVEMMEANQALRH 679
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR 688
T+ SL++ DE+GRGT+T+DG +A +I + H TLF+TH+HE+ +L +
Sbjct: 680 ATDRSLILFDEIGRGTATYDGMALAEAIIEYIHQHVHAKTLFSTHYHELTVLEDSLKGLE 739
Query: 689 NVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
N+ V A+E+ +V L+++ PG KSYG+H AK+AG PE++LE+A ++++ E
Sbjct: 740 NIHVGAVEENGEVVFLHKMMPGPADKSYGIHVAKLAGLPEELLERAATILEKLE 793
>gi|418965200|ref|ZP_13516982.1| DNA mismatch repair protein MutS [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343315|gb|EID21503.1| DNA mismatch repair protein MutS [Streptococcus constellatus subsp.
constellatus SK53]
Length = 852
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 304/589 (51%), Gaps = 70/589 (11%)
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+H + ++ M A M+SL + + + + + + SL ++D +T G RLL +W++QP
Sbjct: 241 VHHYEIKDFLQMDYATMASLDL--TENARTGKKHGSLYWLMDETKTAMGTRLLRRWIQQP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D + I++R V + ++ R +L + +L+G+ D++ LA R+ K KD ++
Sbjct: 299 LIDKERILKRQDVVQVFLDYFFERSDLAD-SLKGVYDIERLASRVSFGKTNPKDLLQLAA 357
Query: 339 GVSQLPKLISILES--------LVQNVE----------------ASNLNTILSSLQSL-- 372
+S +P++ IL+ L++N++ A N+ T + +Q+
Sbjct: 358 TLSNVPQIKGILQGIDHPVLGQLIENLDDIPELANLIQSAISPDAPNVITEGNIIQTGFD 417
Query: 373 KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRY 429
+++D+ VM ++ E+ R + + + I N G+ + +T + +
Sbjct: 418 EILDKYRVVMRDGTSWIADIEAKERAASGINNLKIDY-NKKDGYYFHVTNSQLEHVPSHF 476
Query: 430 TILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAG 477
T++ RF + LA +AN +Y+ R I EE +
Sbjct: 477 FRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGK 524
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP--CMKPMGTGSLVLNQCRHPIVE-L 534
Y + L L+ LA DVL SF A+ + +VRP +P S+ +++ RH +VE +
Sbjct: 525 YIKRLQSLAQTLATIDVLQSF--AAVAEKQRFVRPEFIERP----SIEIDKGRHAVVEKV 578
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G +YIPN + V+ L+TGPNM GKSTY+R + + V +AQ+G +V +SA + +
Sbjct: 579 MGAQTYIPNSISMDEN-VNVQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPI 637
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
D IFTR+GAAD G STFM+EM E I + TE+SL++ DELGRGT+T+DG +A
Sbjct: 638 FDAIFTRIGAADDLVSGQSTFMVEMMEANHAISQATEHSLILFDELGRGTATYDGMALAQ 697
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
+I + + TLFATH+HE+ LS + NV V+ LE++ + L++++ G K
Sbjct: 698 AIIEYIHNRTGAKTLFATHYHELTDLSTSLTQLENVHVATLEKDGQVTFLHKIEAGPADK 757
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK---TPSGDETNNREE 760
SYG+H AK+AG P D+L +A ++ E + K PS N+ +E
Sbjct: 758 SYGIHVAKIAGLPNDLLMRADQILTRLEEQANEKPSLNPSNKGANDSKE 806
>gi|315221533|ref|ZP_07863453.1| DNA mismatch repair protein MutS [Streptococcus anginosus F0211]
gi|315189367|gb|EFU23062.1| DNA mismatch repair protein MutS [Streptococcus anginosus F0211]
Length = 855
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/576 (30%), Positives = 296/576 (51%), Gaps = 63/576 (10%)
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+H + ++ M + M+SL + + + + + + SL ++D +T G RLL W+++P
Sbjct: 243 VHHYEIKDFLQMDYSTMASLDL--TENARTGKKHGSLYWLMDETKTAMGTRLLRAWIQRP 300
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D + IV+R V + +++ R +L + +L+G+ D++ LA R+ K KD ++
Sbjct: 301 LIDKERIVKRQDVVQVFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKTNPKDLLQLAA 359
Query: 339 GVSQLPKLISILE---------------------SLVQNVEASNLNTILSSLQSLKM--- 374
+S +P++ IL+ +L+Q+ +S+ +++ +K
Sbjct: 360 TLSHVPQIKGILKGIDSPVLEDLIAKLDEIPELAALIQSAISSDAPNVITEGNIIKTGFD 419
Query: 375 --MDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRY 429
+D+ VM ++ E+ R + + + I N G+ + +T + +
Sbjct: 420 ETLDKYRVVMRDGTSWIADIEAKERETSGINNLKIDY-NKKDGYYFHVTNSQLEHVPSHF 478
Query: 430 TILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAG 477
T++ RF + LA +AN +Y+ R I EE +
Sbjct: 479 FRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGK 526
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQG 536
Y + L L+ LA DVL SF A+ + +VRP + S+ +++ RH +VE + G
Sbjct: 527 YIKRLQFLAQTLATVDVLQSF--ATVAEKQHFVRPEF--IEQRSIQIDKGRHAVVEKVMG 582
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
+YIPN + V+ L+TGPNM GKSTY+R + + V +AQ+G +V +SA + + D
Sbjct: 583 AQTYIPNSISMDEN-VNVQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFD 641
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E I + TENSL++ DELGRGT+T+DG +A +I
Sbjct: 642 AIFTRIGAADDLVSGQSTFMVEMMEANHAISQATENSLILFDELGRGTATYDGMALAQAI 701
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ + TLFATH+HE+ LS + NV V+ LE++ + L++++ G KSY
Sbjct: 702 IEYIHNRTGSKTLFATHYHELTELSTSLTQLENVHVATLEKDGQVTFLHKIEVGPADKSY 761
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G+H AK+AG P D+L +A ++ E + K+ G
Sbjct: 762 GIHVAKIAGLPNDLLTRADQILTRLESQANEKSSLG 797
>gi|392531926|ref|ZP_10279063.1| DNA mismatch repair protein MutS [Carnobacterium maltaromaticum
ATCC 35586]
Length = 873
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 279/534 (52%), Gaps = 53/534 (9%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ Q +LL +LD +T G RLL QW+ +PL I R A V L+N+ R +L+E
Sbjct: 274 NGQKKGTLLWLLDETKTAMGGRLLKQWIDRPLIQEQKIKGRQAIVESLMNHFFERTDLNE 333
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
AL + D++ LA R+ +D ++ + Q+P+LI I+ +++ + E +T+L
Sbjct: 334 -ALTRVYDLERLAGRVAFGNVNGRDLLQLKTSLLQIPQLIEII-AIINDTE---WDTLLG 388
Query: 368 SLQS-----------------LKMMDR---KDAVMDKMKEYLESTARRLNLVAD------ 401
+L L + D KD +K+ +Y ++ +A
Sbjct: 389 ALDPVTEVVDLIELAIHEDAPLSLKDGGVIKDGYHEKLDQYRDAMRNGKKWMAQLEAEER 448
Query: 402 -----KTIKLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT--- 451
K +K+ N G+ IT L N + Y T+ RF L T
Sbjct: 449 AKTGIKGLKVGYNRIFGYYIEITKANLANLPEGTYERKQTLANAERFITPALKEKETLIL 508
Query: 452 --QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
+ +++ EYE + EV Y + L +L+ +A DVL SF A+ +
Sbjct: 509 EAEEKSMALEYE-----LFAEVRETVKSYIEGLQRLAKNVATIDVLQSF--ATVSEKYHF 561
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
++P M G + L + RHP+VE + G +Y+PN V + E L+TGPNM GKSTY
Sbjct: 562 IKPTMT-TGKHEINLLEGRHPVVEKVLGQQTYVPNSVEMTT-ETDILLITGPNMSGKSTY 619
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
+R + ++V +AQ+GCFVP + A + + DQIFTR+GAAD G STFM+EM E ++
Sbjct: 620 MRQLALTVIMAQMGCFVPAEKADLPIFDQIFTRIGAADDLISGQSTFMVEMMEANQALRH 679
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFR 688
T+ SL++ DE+GRGT+T+DG +A +I + H TLF+TH+HE+ +L +
Sbjct: 680 ATDRSLILFDEIGRGTATYDGMALAEAIIEYIHQHVHAKTLFSTHYHELTVLEDSLKGLE 739
Query: 689 NVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
N+ V A+E+ +V L+++ PG KSYG+H AK+AG PE++LE+A ++++ E
Sbjct: 740 NIHVGAVEENGEVVFLHKMMPGPADKSYGIHVAKLAGLPEELLERAATILEKLE 793
>gi|260558367|ref|ZP_05830563.1| MutS [Enterococcus faecium C68]
gi|35367191|gb|AAN85564.1| MutS [Enterococcus faecium]
gi|260075541|gb|EEW63847.1| MutS [Enterococcus faecium C68]
Length = 881
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 208/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNINGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V LAQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLLAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|194468323|ref|ZP_03074309.1| DNA mismatch repair protein MutS [Lactobacillus reuteri 100-23]
gi|194453176|gb|EDX42074.1| DNA mismatch repair protein MutS [Lactobacillus reuteri 100-23]
Length = 881
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 200/656 (30%), Positives = 317/656 (48%), Gaps = 57/656 (8%)
Query: 135 NDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNAR---LLPEMCL 191
ND N++V L +V + G E + + + N L + LKNA L+ ++
Sbjct: 159 NDAVNELVN-LQSKEVVVDGELPVEITTQ--FKQRNILQSHQPTVLKNAEISYLIQDLDD 215
Query: 192 TTATHCLRSLINYLELMNNEDNMNQF----SIHSIDYSKYVHMSSAVMSSLHVLPQQGST 247
H + L++YL L + ++ + + K H S + +H +
Sbjct: 216 QAQQHVVALLVSYL-LTTQKRSLAHLQKAIAYQPSSFMKIDHYSKTNLELMHNM-----R 269
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L +LD +T G RLL +W+ +PL + +AI ER V L+++ R NL +
Sbjct: 270 SGKRQGTLAWLLDETKTAMGSRLLKRWIDRPLINQNAISERQDKVQELLDHYFERSNLQQ 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
++ + D++ LA R+ +D ++ + Q+PK+ +LE+L V L L
Sbjct: 330 ELIK-VYDLERLAGRVAYGSVNGRDLIQLKTSLKQVPKIKYVLETLDSPV-FEELQKQLD 387
Query: 368 SLQSLK-MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTI 404
L + ++D+ KD D++ +Y ++ +AD K
Sbjct: 388 PLDDVADLIDQSIVEEPPIAVTEGGIIKDGYNDQLDQYRDAMNNGKQWIADLQEHERKLT 447
Query: 405 KLENSPQG----FAYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+ N G F Y I + L+ DRY T+ RF L Q
Sbjct: 448 GINNLKIGYNHVFGYYIEVTKVNLDKLPKDRYERKQTLVNAERFSTPELKEKEALIMGAQ 507
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+ + I ++ G L +L+ LA+ DVL SF++ S +VRP M
Sbjct: 508 EKSTALEYDIFVKIREQVKGQITRLQKLAQQLAELDVLQSFAVVSEDYH--FVRP---EM 562
Query: 518 GTGS-LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
TG L + RHP+VE G Y+PNDV + L+TGPNM GKSTY+R + +
Sbjct: 563 NTGHVLKIKDGRHPVVEKFMGHQEYVPNDVLMGE-DTDILLITGPNMSGKSTYMRQLALI 621
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
+AQIGCFVP SA + + DQ+FTR+GAAD G STFM+EM E + T+ SL+
Sbjct: 622 AVMAQIGCFVPAKSAELPIFDQVFTRIGAADDLISGESTFMVEMMEANNALTHATDRSLI 681
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + H + TLF+TH+HE+ L + +NV V A
Sbjct: 682 LFDEIGRGTATYDGMALAQAIIEYVHQHVRAKTLFSTHYHELTALESSLARLKNVHVGAT 741
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
E++ LV L++V G KSYG+H AK+AG P +L++A ++++ E D K P+
Sbjct: 742 EKDGELVFLHKVSAGPADKSYGIHVAKLAGMPSSLLKRADTILQKLEQK-DVKLPN 796
>gi|293567847|ref|ZP_06679188.1| DNA mismatch repair protein MutS [Enterococcus faecium E1071]
gi|294619660|ref|ZP_06699078.1| DNA mismatch repair protein MutS [Enterococcus faecium E1679]
gi|406579254|ref|ZP_11054486.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD4E]
gi|406581627|ref|ZP_11056764.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD3E]
gi|406584416|ref|ZP_11059447.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD2E]
gi|406589917|ref|ZP_11064331.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD1E]
gi|410938032|ref|ZP_11369890.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD5E]
gi|424779752|ref|ZP_18206649.1| DNA mismatch repair protein MutS [Enterococcus faecium V689]
gi|424964630|ref|ZP_18378706.1| DNA mismatch repair protein MutS [Enterococcus faecium P1190]
gi|424972028|ref|ZP_18385422.1| DNA mismatch repair protein MutS [Enterococcus faecium P1139]
gi|424977413|ref|ZP_18390428.1| DNA mismatch repair protein MutS [Enterococcus faecium P1123]
gi|425038972|ref|ZP_18443548.1| DNA mismatch repair protein MutS [Enterococcus faecium 513]
gi|425061613|ref|ZP_18464828.1| DNA mismatch repair protein MutS [Enterococcus faecium 503]
gi|427397019|ref|ZP_18889645.1| DNA mismatch repair protein mutS [Enterococcus durans FB129-CNAB-4]
gi|430861346|ref|ZP_19478903.1| DNA mismatch repair protein mutS [Enterococcus faecium E1573]
gi|430952593|ref|ZP_19486399.1| DNA mismatch repair protein mutS [Enterococcus faecium E1576]
gi|431000726|ref|ZP_19488207.1| DNA mismatch repair protein mutS [Enterococcus faecium E1578]
gi|431234177|ref|ZP_19502946.1| DNA mismatch repair protein mutS [Enterococcus faecium E1622]
gi|431255693|ref|ZP_19504816.1| DNA mismatch repair protein mutS [Enterococcus faecium E1623]
gi|431303464|ref|ZP_19508311.1| DNA mismatch repair protein mutS [Enterococcus faecium E1626]
gi|431697298|ref|ZP_19524835.1| DNA mismatch repair protein mutS [Enterococcus faecium E1904]
gi|447911658|ref|YP_007393070.1| DNA mismatch repair protein MutS [Enterococcus faecium NRRL B-2354]
gi|291589432|gb|EFF21239.1| DNA mismatch repair protein MutS [Enterococcus faecium E1071]
gi|291594097|gb|EFF25553.1| DNA mismatch repair protein MutS [Enterococcus faecium E1679]
gi|402924882|gb|EJX45066.1| DNA mismatch repair protein MutS [Enterococcus faecium V689]
gi|402946224|gb|EJX64513.1| DNA mismatch repair protein MutS [Enterococcus faecium P1190]
gi|402956777|gb|EJX74212.1| DNA mismatch repair protein MutS [Enterococcus faecium P1139]
gi|402966003|gb|EJX82676.1| DNA mismatch repair protein MutS [Enterococcus faecium P1123]
gi|403017982|gb|EJY30699.1| DNA mismatch repair protein MutS [Enterococcus faecium 513]
gi|403040830|gb|EJY51878.1| DNA mismatch repair protein MutS [Enterococcus faecium 503]
gi|404455559|gb|EKA02403.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD4E]
gi|404459393|gb|EKA05759.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD3E]
gi|404464117|gb|EKA09678.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD2E]
gi|404470103|gb|EKA14775.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD1E]
gi|410733671|gb|EKQ75594.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD5E]
gi|425722345|gb|EKU85240.1| DNA mismatch repair protein mutS [Enterococcus durans FB129-CNAB-4]
gi|430550172|gb|ELA89977.1| DNA mismatch repair protein mutS [Enterococcus faecium E1573]
gi|430557192|gb|ELA96660.1| DNA mismatch repair protein mutS [Enterococcus faecium E1576]
gi|430562385|gb|ELB01617.1| DNA mismatch repair protein mutS [Enterococcus faecium E1578]
gi|430573203|gb|ELB12033.1| DNA mismatch repair protein mutS [Enterococcus faecium E1622]
gi|430577891|gb|ELB16471.1| DNA mismatch repair protein mutS [Enterococcus faecium E1623]
gi|430580105|gb|ELB18585.1| DNA mismatch repair protein mutS [Enterococcus faecium E1626]
gi|430597568|gb|ELB35359.1| DNA mismatch repair protein mutS [Enterococcus faecium E1904]
gi|445187367|gb|AGE29009.1| DNA mismatch repair protein MutS [Enterococcus faecium NRRL B-2354]
Length = 881
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLKKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKNSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|430843136|ref|ZP_19461037.1| DNA mismatch repair protein mutS [Enterococcus faecium E1050]
gi|430497885|gb|ELA73902.1| DNA mismatch repair protein mutS [Enterococcus faecium E1050]
Length = 881
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLKKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKNSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERRQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|257885710|ref|ZP_05665363.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
gi|257821566|gb|EEV48696.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
Length = 881
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|423335913|ref|ZP_17313664.1| DNA mismatch repair protein MutS [Lactobacillus reuteri ATCC 53608]
gi|337729116|emb|CCC04239.1| DNA mismatch repair protein MutS [Lactobacillus reuteri ATCC 53608]
Length = 881
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 271/536 (50%), Gaps = 41/536 (7%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L +LD +T G RLL +W+ +PL + +AI ER V L+++ R NL +
Sbjct: 270 SGKRQGTLAWLLDETKTAMGSRLLKRWIDRPLINQNAISERQDKVQELLDHYFERSNLQQ 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
++ + D++ LA R+ +D ++ + Q+PK+ +LE+L V L L
Sbjct: 330 ELIK-VYDLERLAGRVAYGSVNGRDLIQLKTSLKQVPKIKYVLETLDSPV-FEELQKQLD 387
Query: 368 SLQSLK-MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTI 404
L + ++D+ KD D++ +Y ++ +AD K
Sbjct: 388 PLDDVADLIDQSIVEEPPIAVTEGGIIKDGYNDQLDQYRDAMNNGKQWIADLQEHERKLT 447
Query: 405 KLENSPQG----FAYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+ N G F Y I + L+ DRY T+ RF L Q
Sbjct: 448 GINNLKIGYNHVFGYYIEVTKVNLDKLPKDRYERKQTLVNAERFSTPELKEKEALIMGAQ 507
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+ + I ++ G L +L+ LA+ DVL SF++ S +VRP M
Sbjct: 508 EKSTALEYDIFVKIREQVKGQITRLQKLAQQLAELDVLQSFAVVSEDYH--FVRP---EM 562
Query: 518 GTGS-LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
TG L + RHP+VE G Y+PNDV + L+TGPNM GKSTY+R + +
Sbjct: 563 NTGHVLKIKDGRHPVVEKFMGHQEYVPNDVLMGE-DTDILLITGPNMSGKSTYMRQLALI 621
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
+AQIGCFVP SA + + DQ+FTR+GAAD G STFM+EM E + T+ SL+
Sbjct: 622 AVMAQIGCFVPAKSAELPIFDQVFTRIGAADDLISGESTFMVEMMEANNALTHATDRSLI 681
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + H + TLF+TH+HE+ L + +NV V A
Sbjct: 682 LFDEIGRGTATYDGMALAQAIIEYVHQHVRAKTLFSTHYHELTALENSLARLKNVHVGAT 741
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
E++ LV L++V G KSYG+H AK+AG P +L++A ++++ E D K P+
Sbjct: 742 EKDGELVFLHKVSAGPADKSYGIHVAKLAGMPSSLLKRADTILQKLEQK-DVKLPN 796
>gi|227550809|ref|ZP_03980858.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1330]
gi|257893264|ref|ZP_05672917.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
gi|257896447|ref|ZP_05676100.1| DNA mismatch repair protein MutS [Enterococcus faecium Com12]
gi|227180046|gb|EEI61018.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1330]
gi|257829643|gb|EEV56250.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
gi|257833012|gb|EEV59433.1| DNA mismatch repair protein MutS [Enterococcus faecium Com12]
Length = 881
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 340/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLAVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQS-ALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ +++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADKSYGIHVAKIAGLPANLLERAADILHTLE 792
>gi|416133406|ref|ZP_11598107.1| DNA mismatch repair protein MutS [Enterococcus faecium E4452]
gi|364092929|gb|EHM35246.1| DNA mismatch repair protein MutS [Enterococcus faecium E4452]
Length = 881
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISSVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|69248279|ref|ZP_00604703.1| MutS 1 protein [Enterococcus faecium DO]
gi|257878801|ref|ZP_05658454.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257881439|ref|ZP_05661092.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|257890660|ref|ZP_05670313.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|261207074|ref|ZP_05921763.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289565924|ref|ZP_06446364.1| DNA mismatch repair protein MutS [Enterococcus faecium D344SRF]
gi|293563776|ref|ZP_06678215.1| DNA mismatch repair protein MutS [Enterococcus faecium E1162]
gi|294614622|ref|ZP_06694526.1| DNA mismatch repair protein MutS [Enterococcus faecium E1636]
gi|294621199|ref|ZP_06700384.1| DNA mismatch repair protein MutS [Enterococcus faecium U0317]
gi|314938825|ref|ZP_07846096.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133a04]
gi|314943631|ref|ZP_07850385.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133C]
gi|314948710|ref|ZP_07852083.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0082]
gi|314952160|ref|ZP_07855178.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133A]
gi|314991866|ref|ZP_07857323.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133B]
gi|314996579|ref|ZP_07861614.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133a01]
gi|383327496|ref|YP_005353380.1| DNA mismatch repair protein MutS [Enterococcus faecium Aus0004]
gi|389867318|ref|YP_006374741.1| DNA mismatch repair protein MutS [Enterococcus faecium DO]
gi|415891069|ref|ZP_11549654.1| DNA mismatch repair protein MutS [Enterococcus faecium E4453]
gi|424802623|ref|ZP_18228109.1| DNA mismatch repair protein MutS [Enterococcus faecium S447]
gi|424827507|ref|ZP_18252302.1| DNA mismatch repair protein MutS [Enterococcus faecium R501]
gi|424857781|ref|ZP_18281880.1| DNA mismatch repair protein MutS [Enterococcus faecium R499]
gi|424868969|ref|ZP_18292694.1| DNA mismatch repair protein MutS [Enterococcus faecium R497]
gi|424950343|ref|ZP_18365511.1| DNA mismatch repair protein MutS [Enterococcus faecium R496]
gi|424954585|ref|ZP_18369476.1| DNA mismatch repair protein MutS [Enterococcus faecium R494]
gi|424957683|ref|ZP_18372393.1| DNA mismatch repair protein MutS [Enterococcus faecium R446]
gi|424960856|ref|ZP_18375335.1| DNA mismatch repair protein MutS [Enterococcus faecium P1986]
gi|424967297|ref|ZP_18381002.1| DNA mismatch repair protein MutS [Enterococcus faecium P1140]
gi|424975120|ref|ZP_18388305.1| DNA mismatch repair protein MutS [Enterococcus faecium P1137]
gi|424979695|ref|ZP_18392533.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV99]
gi|424982941|ref|ZP_18395554.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV69]
gi|424986647|ref|ZP_18399055.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV38]
gi|424990665|ref|ZP_18402870.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV26]
gi|424993879|ref|ZP_18405851.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV168]
gi|424998893|ref|ZP_18410554.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV165]
gi|425000837|ref|ZP_18412383.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV161]
gi|425004325|ref|ZP_18415642.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV102]
gi|425006966|ref|ZP_18418119.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV1]
gi|425012041|ref|ZP_18422892.1| DNA mismatch repair protein MutS [Enterococcus faecium E422]
gi|425012983|ref|ZP_18423736.1| DNA mismatch repair protein MutS [Enterococcus faecium E417]
gi|425019039|ref|ZP_18429427.1| DNA mismatch repair protein MutS [Enterococcus faecium C621]
gi|425021797|ref|ZP_18432022.1| DNA mismatch repair protein MutS [Enterococcus faecium C497]
gi|425023023|ref|ZP_18433165.1| DNA mismatch repair protein MutS [Enterococcus faecium C1904]
gi|425032504|ref|ZP_18437547.1| DNA mismatch repair protein MutS [Enterococcus faecium 515]
gi|425036542|ref|ZP_18441285.1| DNA mismatch repair protein MutS [Enterococcus faecium 514]
gi|425041873|ref|ZP_18446252.1| DNA mismatch repair protein MutS [Enterococcus faecium 511]
gi|425045602|ref|ZP_18449693.1| DNA mismatch repair protein MutS [Enterococcus faecium 510]
gi|425050658|ref|ZP_18454382.1| DNA mismatch repair protein MutS [Enterococcus faecium 509]
gi|425050767|ref|ZP_18454480.1| DNA mismatch repair protein MutS [Enterococcus faecium 506]
gi|430820940|ref|ZP_19439559.1| DNA mismatch repair protein mutS [Enterococcus faecium E0045]
gi|430828857|ref|ZP_19446969.1| DNA mismatch repair protein mutS [Enterococcus faecium E0269]
gi|430831899|ref|ZP_19449947.1| DNA mismatch repair protein mutS [Enterococcus faecium E0333]
gi|430847392|ref|ZP_19465230.1| DNA mismatch repair protein mutS [Enterococcus faecium E1133]
gi|430855669|ref|ZP_19473377.1| DNA mismatch repair protein mutS [Enterococcus faecium E1392]
gi|431544341|ref|ZP_19518637.1| DNA mismatch repair protein mutS [Enterococcus faecium E1731]
gi|431747155|ref|ZP_19535956.1| DNA mismatch repair protein mutS [Enterococcus faecium E2134]
gi|431749343|ref|ZP_19538085.1| DNA mismatch repair protein mutS [Enterococcus faecium E2297]
gi|431755857|ref|ZP_19544500.1| DNA mismatch repair protein mutS [Enterococcus faecium E2883]
gi|431767994|ref|ZP_19556436.1| DNA mismatch repair protein mutS [Enterococcus faecium E1321]
gi|431769501|ref|ZP_19557909.1| DNA mismatch repair protein mutS [Enterococcus faecium E1644]
gi|431773359|ref|ZP_19561684.1| DNA mismatch repair protein mutS [Enterococcus faecium E2369]
gi|431776458|ref|ZP_19564719.1| DNA mismatch repair protein mutS [Enterococcus faecium E2560]
gi|431779624|ref|ZP_19567817.1| DNA mismatch repair protein mutS [Enterococcus faecium E4389]
gi|431782570|ref|ZP_19570703.1| DNA mismatch repair protein mutS [Enterococcus faecium E6012]
gi|431784398|ref|ZP_19572437.1| DNA mismatch repair protein mutS [Enterococcus faecium E6045]
gi|35367172|gb|AAN85558.1| MutS [Enterococcus faecium]
gi|35367177|gb|AAN85560.1| MutS [Enterococcus faecium]
gi|68194464|gb|EAN08964.1| MutS 1 protein [Enterococcus faecium DO]
gi|257813029|gb|EEV41787.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257817097|gb|EEV44425.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|257827020|gb|EEV53646.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260078702|gb|EEW66404.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289162297|gb|EFD10157.1| DNA mismatch repair protein MutS [Enterococcus faecium D344SRF]
gi|291592524|gb|EFF24129.1| DNA mismatch repair protein MutS [Enterococcus faecium E1636]
gi|291599195|gb|EFF30227.1| DNA mismatch repair protein MutS [Enterococcus faecium U0317]
gi|291604257|gb|EFF33752.1| DNA mismatch repair protein MutS [Enterococcus faecium E1162]
gi|313589268|gb|EFR68113.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133a01]
gi|313593571|gb|EFR72416.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133B]
gi|313595692|gb|EFR74537.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133A]
gi|313597668|gb|EFR76513.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133C]
gi|313641836|gb|EFS06416.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133a04]
gi|313644882|gb|EFS09462.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0082]
gi|364094161|gb|EHM36360.1| DNA mismatch repair protein MutS [Enterococcus faecium E4453]
gi|378937190|gb|AFC62262.1| DNA mismatch repair protein MutS [Enterococcus faecium Aus0004]
gi|388532567|gb|AFK57759.1| DNA mismatch repair protein MutS [Enterococcus faecium DO]
gi|402919449|gb|EJX40048.1| DNA mismatch repair protein MutS [Enterococcus faecium S447]
gi|402923415|gb|EJX43709.1| DNA mismatch repair protein MutS [Enterococcus faecium R501]
gi|402928020|gb|EJX47926.1| DNA mismatch repair protein MutS [Enterococcus faecium R499]
gi|402933330|gb|EJX52776.1| DNA mismatch repair protein MutS [Enterococcus faecium R496]
gi|402936316|gb|EJX55502.1| DNA mismatch repair protein MutS [Enterococcus faecium R497]
gi|402936393|gb|EJX55575.1| DNA mismatch repair protein MutS [Enterococcus faecium R494]
gi|402942848|gb|EJX61399.1| DNA mismatch repair protein MutS [Enterococcus faecium R446]
gi|402945672|gb|EJX64007.1| DNA mismatch repair protein MutS [Enterococcus faecium P1986]
gi|402954652|gb|EJX72252.1| DNA mismatch repair protein MutS [Enterococcus faecium P1137]
gi|402954696|gb|EJX72293.1| DNA mismatch repair protein MutS [Enterococcus faecium P1140]
gi|402968307|gb|EJX84794.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV99]
gi|402972640|gb|EJX88827.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV69]
gi|402976003|gb|EJX91926.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV38]
gi|402979061|gb|EJX94750.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV26]
gi|402981569|gb|EJX97088.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV168]
gi|402981613|gb|EJX97129.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV165]
gi|402988352|gb|EJY03364.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV161]
gi|402989753|gb|EJY04664.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV102]
gi|402994866|gb|EJY09368.1| DNA mismatch repair protein MutS [Enterococcus faecium E422]
gi|402996021|gb|EJY10430.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV1]
gi|402999560|gb|EJY13744.1| DNA mismatch repair protein MutS [Enterococcus faecium C621]
gi|403002199|gb|EJY16203.1| DNA mismatch repair protein MutS [Enterococcus faecium E417]
gi|403005224|gb|EJY18955.1| DNA mismatch repair protein MutS [Enterococcus faecium C497]
gi|403011196|gb|EJY24524.1| DNA mismatch repair protein MutS [Enterococcus faecium C1904]
gi|403012748|gb|EJY25929.1| DNA mismatch repair protein MutS [Enterococcus faecium 515]
gi|403014315|gb|EJY27329.1| DNA mismatch repair protein MutS [Enterococcus faecium 514]
gi|403022766|gb|EJY35105.1| DNA mismatch repair protein MutS [Enterococcus faecium 509]
gi|403025273|gb|EJY37362.1| DNA mismatch repair protein MutS [Enterococcus faecium 511]
gi|403026675|gb|EJY38629.1| DNA mismatch repair protein MutS [Enterococcus faecium 510]
gi|403039968|gb|EJY51076.1| DNA mismatch repair protein MutS [Enterococcus faecium 506]
gi|430438988|gb|ELA49376.1| DNA mismatch repair protein mutS [Enterococcus faecium E0045]
gi|430480540|gb|ELA57714.1| DNA mismatch repair protein mutS [Enterococcus faecium E0333]
gi|430482680|gb|ELA59791.1| DNA mismatch repair protein mutS [Enterococcus faecium E0269]
gi|430537146|gb|ELA77496.1| DNA mismatch repair protein mutS [Enterococcus faecium E1133]
gi|430546724|gb|ELA86667.1| DNA mismatch repair protein mutS [Enterococcus faecium E1392]
gi|430592453|gb|ELB30468.1| DNA mismatch repair protein mutS [Enterococcus faecium E1731]
gi|430606969|gb|ELB44300.1| DNA mismatch repair protein mutS [Enterococcus faecium E2134]
gi|430611771|gb|ELB48847.1| DNA mismatch repair protein mutS [Enterococcus faecium E2297]
gi|430616356|gb|ELB53278.1| DNA mismatch repair protein mutS [Enterococcus faecium E2883]
gi|430629895|gb|ELB66279.1| DNA mismatch repair protein mutS [Enterococcus faecium E1321]
gi|430636606|gb|ELB72670.1| DNA mismatch repair protein mutS [Enterococcus faecium E2369]
gi|430636815|gb|ELB72869.1| DNA mismatch repair protein mutS [Enterococcus faecium E1644]
gi|430640777|gb|ELB76605.1| DNA mismatch repair protein mutS [Enterococcus faecium E2560]
gi|430641725|gb|ELB77520.1| DNA mismatch repair protein mutS [Enterococcus faecium E4389]
gi|430647207|gb|ELB82655.1| DNA mismatch repair protein mutS [Enterococcus faecium E6012]
gi|430649493|gb|ELB84869.1| DNA mismatch repair protein mutS [Enterococcus faecium E6045]
Length = 881
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|422849889|ref|ZP_16896565.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK115]
gi|325689185|gb|EGD31192.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK115]
Length = 849
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 191/646 (29%), Positives = 315/646 (48%), Gaps = 62/646 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L++ +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALEDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + H + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAHHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + ++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARISQRQNVVEVFLDYFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEA-SNLNTILSSLQSLK---- 373
K KD ++ + +P++ +IL+ L++ ++ L ++SS S
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAISPDAPHI 405
Query: 374 ------MMDRKDAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
+ D +D+ + L E T L + +K++ N G+ + +T
Sbjct: 406 ITEGNIIQTGFDETLDQYRLVLREGTGWIAELEVKERANCGISNLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
+ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I EE + Y Q L L+ LA DVL SF A+ + VRP G L + +
Sbjct: 518 IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPIFT--GERRLQIEK 569
Query: 527 CRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +V
Sbjct: 570 GRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYV 628
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+
Sbjct: 629 PAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTA 688
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++ + L+
Sbjct: 689 TYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALEDSLEHLENVHVATLEKDGQVTFLH 748
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
+++PG KSYG+H AK+AG PE +LE+A ++ E S DT S
Sbjct: 749 KIEPGPADKSYGIHVAKIAGLPEKLLERADSILSHLE-SQDTALGS 793
>gi|430853214|ref|ZP_19470944.1| DNA mismatch repair protein mutS [Enterococcus faecium E1258]
gi|430541036|gb|ELA81213.1| DNA mismatch repair protein mutS [Enterococcus faecium E1258]
Length = 881
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 209/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + + + + H + Y + + S+ +QG+ LL +L
Sbjct: 239 SLAHIQKAVEYQPD------HFLKMDYYSKFNLELSQSIRTGKKQGT--------LLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQS-ALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKKLETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAADVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|146319777|ref|YP_001199489.1| DNA mismatch repair protein MutS [Streptococcus suis 05ZYH33]
gi|145690583|gb|ABP91089.1| Mismatch repair ATPase (MutS family) [Streptococcus suis 05ZYH33]
Length = 726
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 321/645 (49%), Gaps = 61/645 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + + G +E E+ +N L+ F+D ++ +L+ L++YL
Sbjct: 49 RARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKAAAGKLLSYLH 108
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
D + + + Y+ M A SSL +L + + + + SL +LD +T
Sbjct: 109 RTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLL--ENGRTGKKHGSLYWLLDETKTAM 166
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL DL I R A V + ++ R +L E AL+G+ D++ LA R+
Sbjct: 167 GMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFG 225
Query: 327 KAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEAS-----NLNTILSS--------- 368
K KD ++ + + +P + +IL E + N+ A L+ ++SS
Sbjct: 226 KTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHALISSAIDPEAQGT 285
Query: 369 --------------LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGF 413
L +++ R+ A E E A +N +K++ N G+
Sbjct: 286 ITDGNIIRTGFDETLDQYRLVMREGAGWIAEIEAKEREASGIN-----NLKIDYNKKDGY 340
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIV 468
+ +T ++ D + T++ R+ + LA Q ++ EYE + I
Sbjct: 341 YFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMR-IR 399
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+EV Y L +L+ +A DVL +F++ A + ++ C + L +++ R
Sbjct: 400 QEV----EKYIGRLQKLARTIATIDVLQAFAV---VAEQQHL-VCPRFTDQRELTIDRGR 451
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN ++ + + L+TGPNM GKSTY+R + V V +AQ+G +VP
Sbjct: 452 HAVVEKVMGKQTYIPNSIHLNT-DTHMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPA 510
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D IFTR+GAAD G STFM+EM E ++ T+ SL++ DELGRGT+T+
Sbjct: 511 DQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATY 570
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + TLFATH+HE+ LS+ + NV VS LE++ + L+++
Sbjct: 571 DGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKI 630
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G KSYG+H AK+AG PE++L++A +++ +L+ + P+
Sbjct: 631 AQGPADKSYGIHVAKIAGMPEELLQRADRILQ----TLENQAPTA 671
>gi|431208718|ref|ZP_19500931.1| DNA mismatch repair protein mutS [Enterococcus faecium E1620]
gi|430570724|gb|ELB09664.1| DNA mismatch repair protein mutS [Enterococcus faecium E1620]
Length = 881
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|389857633|ref|YP_006359876.1| DNA mismatch repair protein MutS [Streptococcus suis ST1]
gi|353741351|gb|AER22358.1| DNA mismatch repair protein MutS [Streptococcus suis ST1]
Length = 846
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 321/645 (49%), Gaps = 61/645 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + + G +E E+ +N L+ F+D ++ +L+ L++YL
Sbjct: 169 RARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKAAAGKLLSYLH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
D + + + Y+ M A SSL +L + + + + SL +LD +T
Sbjct: 229 RTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLL--ENGRTGKKHGSLYWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL DL I R A V + ++ R +L E AL+G+ D++ LA R+
Sbjct: 287 GMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEAS-----NLNTILSS--------- 368
K KD ++ + + +P + +IL E + N+ A L+ ++SS
Sbjct: 346 KTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHVLISSAIDPEAQGT 405
Query: 369 --------------LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGF 413
L +++ R+ A E E A +N +K++ N G+
Sbjct: 406 ITDGNIIRTGFDETLDQYRLVIREGAGWIAEIEAKEREASGIN-----NLKIDYNKKDGY 460
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIV 468
+ +T ++ D + T++ R+ + LA Q ++ EYE + I
Sbjct: 461 YFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMR-IR 519
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+EV Y L +L+ +A DVL +F++ A + ++ C + L +++ R
Sbjct: 520 QEV----EKYIGRLQKLARTIATIDVLQAFAV---VAEQQHL-VCPRFTDQRELTIDRGR 571
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN ++ + + L+TGPNM GKSTY+R + V V +AQ+G +VP
Sbjct: 572 HAVVEKVMGKQTYIPNSIHLNT-DTHMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPA 630
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D IFTR+GAAD G STFM+EM E ++ T+ SL++ DELGRGT+T+
Sbjct: 631 DQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATY 690
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + TLFATH+HE+ LS+ + NV VS LE++ + L+++
Sbjct: 691 DGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKI 750
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G KSYG+H AK+AG PE++L++A +++ +L+ + P+
Sbjct: 751 AQGPADKSYGIHVAKIAGMPEELLQRADRILQ----TLENQAPTA 791
>gi|341821182|emb|CCC57524.1| DNA mismatch repair protein mutS [Weissella thailandensis fsh4-2]
Length = 885
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 273/523 (52%), Gaps = 36/523 (6%)
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
Q +LL +LD +T G R L QW++QPL D D + +R+ + L+ + R L E A
Sbjct: 275 QRSGTLLWLLDETKTAMGGRALKQWLEQPLLDADLLTQRYDKIGELIKDFFGRAALQE-A 333
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL---------VQNVEAS 360
L+ + D++ LA R+ A +D ++ + Q+P++++IL L Q +
Sbjct: 334 LQAVYDLERLAGRVAYGTANGRDLLQLRNSLRQVPEILAILGDLDPAIFGQLHAQIDPVA 393
Query: 361 NLNTILSSLQSLK-----------------MMDRKDAVMDKMKEYL-ESTARRLNLVADK 402
++ T++S + + +D +M K +L E A
Sbjct: 394 DIETLISDAITDEPPISVTDGGVIRAGYDEQLDSYRDIMTNGKTWLAELEAHEREATGIN 453
Query: 403 TIKLE-NSPQGFAYRITMKLNNSID-DRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
++K+ N G+ +T + +D +RYT T+ RF L + +
Sbjct: 454 SLKIGFNKVFGYYIEVTKANISKLDPERYTRKQTLVNAERFITPELKEREQLILEAESKS 513
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ + +V GI Q + L+ LAQ DVL S +A+ +VRP + T
Sbjct: 514 SELEYQLFAKVRGIIKENIQRIQGLAAHLAQLDVLQS--LATVAEKYHFVRPTLTDEQT- 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
+ + + RHP+VE + G SY+ NDV + + L+TGPNM GKSTY+R + + V +A
Sbjct: 571 -IAIKEGRHPVVEKVLGHQSYVANDVDMQPSDTIL-LITGPNMSGKSTYMRQLALIVIMA 628
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
QIG FVP + AT+ V DQIFTR+GAAD G STFM+EM E T ++ T++SL++ DE
Sbjct: 629 QIGSFVPAEEATLPVFDQIFTRIGAADDLISGNSTFMVEMAEANTALQNATKHSLILFDE 688
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ L+ + RNV V A E+
Sbjct: 689 LGRGTATYDGMALAQAIIEYVHQHTQAKTLFSTHYHELTALADELTALRNVHVGANEENG 748
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ ++V PG +SYG++ AK+AG PE ++++A ++ E
Sbjct: 749 ELIFSHKVLPGPADQSYGINVAKLAGLPESLIDRAAKILANLE 791
>gi|337286407|ref|YP_004625880.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
gi|335359235|gb|AEH44916.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
Length = 857
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 290/556 (52%), Gaps = 45/556 (8%)
Query: 225 SKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDA 284
S+++ + A +L +L + + SLL +LD+ TP G RLL +W+ PL++L++
Sbjct: 262 SQFLIIDEATKRNLEIL--RNNLDGSLKGSLLWVLDKTLTPMGGRLLKEWLLYPLRNLES 319
Query: 285 IVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP 344
I R AV LV+ R NL E R + D++ L R A +D + + + +P
Sbjct: 320 IEARLEAVAYLVDEPSKRKNLRELLAR-IADVERLTGRAAMGVANPRDLLALKDSLKMVP 378
Query: 345 KLISIL-ESLVQNVEASNLNTILSS--LQSLKMMDRKDA---------VMDKMKEYLEST 392
+L +L E + ++A N ++ +Q+L+ R++A + D + E L+
Sbjct: 379 QLKELLPEKISPLLDAIKENLLVPGDLVQNLEKTIREEAPVNFKEGGVIKDGVHEELDEL 438
Query: 393 AR----RLNLVADKTIKLENSPQG-----------FAYRITMKLNN--SIDDRYTILDTV 435
R L+ +A+ + E + G F Y I + ++ + D Y T+
Sbjct: 439 RRLKDDALSFLAELETR-ERARTGIPNLKVGYNRVFGYYIEVSKSHLSKVPDNYIRKQTL 497
Query: 436 RGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVL 495
GG RF L + + + +Q + E+ A Q L +L+ LA DVL
Sbjct: 498 VGGERFITPELKEFEAKVLSADERIKELEQELFLEIRKNVAEKAQELKKLARALATLDVL 557
Query: 496 VSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVS 553
S +A Y+RP K + + + + RHP+VE L G S++PN V E
Sbjct: 558 AS--LAEVAVTNNYIRP--KIIEEPGIQIREGRHPVVEKALPSG-SFVPNSVKLDLKENV 612
Query: 554 FNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIS 613
++TGPNM GKST +R + LA +G FVP + ATI + D+IF+R+GA+D RG S
Sbjct: 613 VLVITGPNMAGKSTILRQTALITLLAHVGSFVPAEEATIGLCDRIFSRIGASDQLSRGRS 672
Query: 614 TFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATH 673
TFM+EM E A ++ + T SLVI+DE+GRGTST+DG +A ++A E ++ TLFATH
Sbjct: 673 TFMVEMSECANILHQATSRSLVILDEIGRGTSTYDGLAIAWAVA-EFLHEKKIMTLFATH 731
Query: 674 FHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQ 733
+HE+ L+ P +N V+ ED ++ LY++ PG +SYGV A +AG P++++ +
Sbjct: 732 YHELVELAGEYPGIKNFNVAVKTFEDQIIFLYRLLPGPASESYGVQVAALAGLPKEVIAR 791
Query: 734 ARDLMKEYEYSLDTKT 749
A+D++K SL+ KT
Sbjct: 792 AKDILK----SLENKT 803
>gi|146321975|ref|YP_001201686.1| DNA mismatch repair protein MutS [Streptococcus suis 98HAH33]
gi|386578921|ref|YP_006075327.1| MutS-1 protein [Streptococcus suis GZ1]
gi|189083200|sp|A4W4J7.1|MUTS_STRS2 RecName: Full=DNA mismatch repair protein MutS
gi|145692781|gb|ABP93286.1| Mismatch repair ATPase (MutS family) [Streptococcus suis 98HAH33]
gi|292559384|gb|ADE32385.1| MutS-1 protein [Streptococcus suis GZ1]
Length = 847
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 321/645 (49%), Gaps = 61/645 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + + G +E E+ +N L+ F+D ++ +L+ L++YL
Sbjct: 170 RARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKAAAGKLLSYLH 229
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
D + + + Y+ M A SSL +L + + + + SL +LD +T
Sbjct: 230 RTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLL--ENGRTGKKHGSLYWLLDETKTAM 287
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL DL I R A V + ++ R +L E AL+G+ D++ LA R+
Sbjct: 288 GMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFG 346
Query: 327 KAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEAS-----NLNTILSS--------- 368
K KD ++ + + +P + +IL E + N+ A L+ ++SS
Sbjct: 347 KTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHALISSAIDPEAQGT 406
Query: 369 --------------LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGF 413
L +++ R+ A E E A +N +K++ N G+
Sbjct: 407 ITDGNIIRTGFDETLDQYRLVMREGAGWIAEIEAKEREASGIN-----NLKIDYNKKDGY 461
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIV 468
+ +T ++ D + T++ R+ + LA Q ++ EYE + I
Sbjct: 462 YFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMR-IR 520
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+EV Y L +L+ +A DVL +F++ A + ++ C + L +++ R
Sbjct: 521 QEV----EKYIGRLQKLARTIATIDVLQAFAV---VAEQQHL-VCPRFTDQRELTIDRGR 572
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN ++ + + L+TGPNM GKSTY+R + V V +AQ+G +VP
Sbjct: 573 HAVVEKVMGKQTYIPNSIHLNT-DTHMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPA 631
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D IFTR+GAAD G STFM+EM E ++ T+ SL++ DELGRGT+T+
Sbjct: 632 DQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATY 691
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + TLFATH+HE+ LS+ + NV VS LE++ + L+++
Sbjct: 692 DGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKI 751
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G KSYG+H AK+AG PE++L++A +++ +L+ + P+
Sbjct: 752 AQGPADKSYGIHVAKIAGMPEELLQRADRILQ----TLENQAPTA 792
>gi|417850302|ref|ZP_12496212.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1080]
gi|339452886|gb|EGP65506.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1080]
Length = 844
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 190/647 (29%), Positives = 321/647 (49%), Gaps = 64/647 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLAAVEQAASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + I++R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMKQPALTYLIEQLDGIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +DK + L E T + A + T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSRIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLITGPNMSGKSTYMRQLAMTAIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESARLPIFYAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
++++PG KSYG+H AK+AG P D+L +A ++ + E S T++P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE-SQGTESPA 793
>gi|431592259|ref|ZP_19521495.1| DNA mismatch repair protein mutS [Enterococcus faecium E1861]
gi|430591884|gb|ELB29911.1| DNA mismatch repair protein mutS [Enterococcus faecium E1861]
Length = 881
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 341/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLAVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ +++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISAADVLQSF--ATISERYQYVRPELVS-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKEAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTILEKELPQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADKSYGIHVAKIAGLPANLLERAADILHTLE 792
>gi|253752761|ref|YP_003025902.1| DNA mismatch repair protein MutS [Streptococcus suis SC84]
gi|253754586|ref|YP_003027727.1| DNA mismatch repair protein MutS [Streptococcus suis P1/7]
gi|253756519|ref|YP_003029659.1| DNA mismatch repair protein MutS [Streptococcus suis BM407]
gi|386580987|ref|YP_006077392.1| DNA mismatch repair protein MutS [Streptococcus suis JS14]
gi|386583064|ref|YP_006079468.1| DNA mismatch repair protein MutS [Streptococcus suis SS12]
gi|386589193|ref|YP_006085594.1| DNA mismatch repair protein MutS [Streptococcus suis A7]
gi|403062526|ref|YP_006650742.1| DNA mismatch repair protein MutS [Streptococcus suis S735]
gi|251817050|emb|CAZ52702.1| DNA mismatch repair protein MutS [Streptococcus suis SC84]
gi|251818983|emb|CAZ56830.1| DNA mismatch repair protein MutS [Streptococcus suis BM407]
gi|251820832|emb|CAR47598.1| DNA mismatch repair protein MutS [Streptococcus suis P1/7]
gi|319759179|gb|ADV71121.1| DNA mismatch repair protein MutS [Streptococcus suis JS14]
gi|353735210|gb|AER16220.1| DNA mismatch repair protein MutS [Streptococcus suis SS12]
gi|354986354|gb|AER45252.1| DNA mismatch repair protein MutS [Streptococcus suis A7]
gi|402809852|gb|AFR01344.1| DNA mismatch repair protein MutS [Streptococcus suis S735]
Length = 846
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 321/645 (49%), Gaps = 61/645 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + + G +E E+ +N L+ F+D ++ +L+ L++YL
Sbjct: 169 RARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKAAAGKLLSYLH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
D + + + Y+ M A SSL +L + + + + SL +LD +T
Sbjct: 229 RTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLL--ENGRTGKKHGSLYWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL DL I R A V + ++ R +L E AL+G+ D++ LA R+
Sbjct: 287 GMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEAS-----NLNTILSS--------- 368
K KD ++ + + +P + +IL E + N+ A L+ ++SS
Sbjct: 346 KTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHALISSAIDPEAQGT 405
Query: 369 --------------LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGF 413
L +++ R+ A E E A +N +K++ N G+
Sbjct: 406 ITDGNIIRTGFDETLDQYRLVMREGAGWIAEIEAKEREASGIN-----NLKIDYNKKDGY 460
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIV 468
+ +T ++ D + T++ R+ + LA Q ++ EYE + I
Sbjct: 461 YFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMR-IR 519
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+EV Y L +L+ +A DVL +F++ A + ++ C + L +++ R
Sbjct: 520 QEV----EKYIGRLQKLARTIATIDVLQAFAV---VAEQQHL-VCPRFTDQRELTIDRGR 571
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN ++ + + L+TGPNM GKSTY+R + V V +AQ+G +VP
Sbjct: 572 HAVVEKVMGKQTYIPNSIHLNT-DTHMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPA 630
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D IFTR+GAAD G STFM+EM E ++ T+ SL++ DELGRGT+T+
Sbjct: 631 DQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATY 690
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + TLFATH+HE+ LS+ + NV VS LE++ + L+++
Sbjct: 691 DGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKI 750
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G KSYG+H AK+AG PE++L++A +++ +L+ + P+
Sbjct: 751 AQGPADKSYGIHVAKIAGMPEELLQRADRILQ----TLENQAPTA 791
>gi|408789864|ref|ZP_11201505.1| DNA mismatch repair protein MutS [Lactobacillus florum 2F]
gi|408520886|gb|EKK20908.1| DNA mismatch repair protein MutS [Lactobacillus florum 2F]
Length = 856
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 282/555 (50%), Gaps = 53/555 (9%)
Query: 224 YSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLD 283
Y K H S A + +H + + G S +LLG++D +T G R L QW+++PL
Sbjct: 248 YLKIDHNSQANLELMHNI-RTGKKSG----TLLGVVDDTKTAMGGRKLKQWLERPLLQRK 302
Query: 284 AIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQL 343
I R V L+++ R L E AL + D++ LA RI +D ++ ++Q+
Sbjct: 303 QIEVRQTLVQELLDHYYERNELRE-ALVSVYDLERLAGRISLGGVNGRDLIQLQTSLTQI 361
Query: 344 PKLISILESLVQNVEASNLNTILSSLQ-------------------------------SL 372
PK+ +L L E + IL L S
Sbjct: 362 PKIKHVLNEL----EQAQFQKILQRLDDCHDVQTAIQVAIVAEPPISVTDGGLIKPGYSE 417
Query: 373 KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRIT-MKLNNSIDDR 428
K+ +DA M +++L E R + + IK N G+ I+ + L DR
Sbjct: 418 KLDQYRDA-MQHGRQWLAELEQQERAATGINNLKIKY-NRVFGYFIEISKVNLTKVPTDR 475
Query: 429 YTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDV 488
Y + T+ RF L + Q + T + + ++ + +L+
Sbjct: 476 YERVQTLTNAERFTTPALKEKESLILEAQEKSRTLEYDLFTKLRDQIKLEIPRVQKLAGA 535
Query: 489 LAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYF 547
+++ DVL SF A+ + RP T L +N RHP+VE + G Y+PNDV
Sbjct: 536 VSELDVLQSF--ATISEQHQFARPQFNDQET--LQINNGRHPVVEEVLGAQQYVPNDVVM 591
Query: 548 KSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADS 607
E + L+TGPNM GKSTY+R + + V LAQ+GCFVP ++AT+ + DQ+FTR+GAAD
Sbjct: 592 -GPETAILLITGPNMSGKSTYMRQLALIVILAQVGCFVPAETATLPIFDQVFTRIGAADD 650
Query: 608 QYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPF 667
G STFM+EMKE I+ T +SL++ DELGRGTST+DG +A +I + +H
Sbjct: 651 LISGKSTFMVEMKEANQAIQLATRHSLILFDELGRGTSTYDGVALAQAIIEYIHNHVHAK 710
Query: 668 TLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYP 727
TLF+TH+HE+ L+ +P +NV V A+E++D LV L+++ PG KSYG++ AK+AG P
Sbjct: 711 TLFSTHYHELTDLANHLPQLQNVHVGAVEKDDQLVFLHKILPGPADKSYGINVAKLAGLP 770
Query: 728 EDMLEQARDLMKEYE 742
+L++A+ ++ + E
Sbjct: 771 SPLLQRAQVILNQLE 785
>gi|223933229|ref|ZP_03625220.1| DNA mismatch repair protein MutS [Streptococcus suis 89/1591]
gi|386585132|ref|YP_006081535.1| DNA mismatch repair protein MutS [Streptococcus suis D9]
gi|223898159|gb|EEF64529.1| DNA mismatch repair protein MutS [Streptococcus suis 89/1591]
gi|353737278|gb|AER18287.1| DNA mismatch repair protein MutS [Streptococcus suis D9]
Length = 846
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 188/635 (29%), Positives = 317/635 (49%), Gaps = 57/635 (8%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + + G +E E+ +N L+ F+D ++ +L+ L++YL
Sbjct: 169 RARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKAAAGKLLSYLH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
D + + + Y+ M A SSL +L + + + + SL +LD +T
Sbjct: 229 RTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLL--ENGRTGKKHGSLYWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL DL I R A V + ++ R +L E AL+G+ D++ LA R+
Sbjct: 287 GMRLLRTWIDRPLIDLKRIENRQAIVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESL----VQNVEAS-----NLNTILSS--------- 368
K KD ++ + + +P + +IL+ + + N+ A L+ ++SS
Sbjct: 346 KTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHALISSAIDPEAQGT 405
Query: 369 --------------LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGF 413
L +++ R+ A E E A +N +K++ N G+
Sbjct: 406 ITDGNIIRTGFDETLDQYRLVIREGAGWIAEIEAKEREASGIN-----NLKIDYNKKDGY 460
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIV 468
+ +T ++ D + T++ R+ + LA Q ++ EYE + I
Sbjct: 461 YFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMR-IR 519
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+EV Y L +L+ +A DVL +F++ A + ++ C + L +++ R
Sbjct: 520 QEV----EKYIGRLQKLARTIATIDVLQAFAV---VAEQQHL-VCPRFTDQRELTIDRGR 571
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN ++ + + L+TGPNM GKSTY+R + V V +AQ+G +VP
Sbjct: 572 HAVVEKVMGKQTYIPNSIHLNT-DTHMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPA 630
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D IFTR+GAAD G STFM+EM E ++ T+ SL++ DELGRGT+T+
Sbjct: 631 DQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATY 690
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + TLFATH+HE+ LS+ + NV VS LE++ + L+++
Sbjct: 691 DGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKI 750
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
G KSYG+H AK+AG PE++L++A +++ E
Sbjct: 751 AQGPADKSYGIHVAKIAGMPEELLQRADRILQTLE 785
>gi|418964295|ref|ZP_13516109.1| DNA mismatch repair protein MutS [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383341100|gb|EID19368.1| DNA mismatch repair protein MutS [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 855
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 173/576 (30%), Positives = 293/576 (50%), Gaps = 63/576 (10%)
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+H + ++ M + M+SL + + + + + + SL ++D +T G RLL W+++P
Sbjct: 243 VHHYEIKDFLQMDYSTMASLDL--TENARTGKKHGSLYWLMDDTKTAMGTRLLRAWIQRP 300
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D + IV+R V + +++ R +L + L+G+ D++ LA R+ K KD ++
Sbjct: 301 LIDKERIVKRQDVVQVFLDHFFERSDLSD-TLKGVYDIERLASRVSFGKTNPKDLLQLAA 359
Query: 339 GVSQLPKLISILE---------------------SLVQNVEASNLNTILSSLQSLKM--- 374
+S +P++ IL+ SL+Q+ + + +++ +K
Sbjct: 360 TLSHVPQIKGILKGIDSPVLEDLIAKLDEIPELASLIQSAISPDAPNVITEGNIIKTGFD 419
Query: 375 --MDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRY 429
+D+ VM ++ E+ R + + + I N G+ + +T + +
Sbjct: 420 ETLDKYRVVMRDGTSWIADIEAKEREASGINNLKIDY-NKKDGYYFHVTNSQLEHVPSHF 478
Query: 430 TILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAG 477
T++ RF + LA +AN +Y+ R I EE +
Sbjct: 479 FRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGK 526
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQG 536
Y + L L+ LA DVL SF A+ + +VRP + S+ +++ RH +VE + G
Sbjct: 527 YIKRLQSLAQTLATVDVLQSF--AAVAEKQHFVRPEF--IEQRSIQIDKGRHAVVEKVMG 582
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
+YIPN + V+ L+TGPNM GKSTY+R + + V +AQ+G +V +SA + + D
Sbjct: 583 AQTYIPNSISMDEN-VNVQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFD 641
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E I + TENSL++ DELGRGT+T+DG +A +I
Sbjct: 642 AIFTRIGAADDLVSGQSTFMIEMMEANHAISQATENSLILFDELGRGTATYDGMALAQAI 701
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ + TLFATH+HE+ LS + NV V LE++ + L++++ G KSY
Sbjct: 702 IEYIHNRTGAKTLFATHYHELTELSTSLTQLENVHVETLEKDGQVTFLHKIEVGPADKSY 761
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G+H AK+AG P D+L +A ++ E + K+ G
Sbjct: 762 GIHVAKIAGLPNDLLTRADQILTRLESQANEKSSFG 797
>gi|406658847|ref|ZP_11066987.1| DNA mismatch repair protein MutS [Streptococcus iniae 9117]
gi|405579062|gb|EKB53176.1| DNA mismatch repair protein MutS [Streptococcus iniae 9117]
Length = 846
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 194/707 (27%), Positives = 346/707 (48%), Gaps = 64/707 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +F++ E+ D +S+ + + +E +L D +N+ L+ NK
Sbjct: 139 GLSYMDLATGEFFVTELSD---FSSACSEVFNLKAREVVLGFSLTQDQENQ----LNPNK 191
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ +++E E+D + D V K + + + + +H L+ +++Y
Sbjct: 192 ALLLS-QESEILEDDHLLDKQLTVAERQVAGKLLQYVQKTQMRELSH-LQQVVHY----- 244
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ Y+ MS A +SL ++ + + + + + SL +LD +T G R
Sbjct: 245 -------------EIKDYLQMSYATKNSLDLI--ENARTQKKHGSLYWLLDETKTAMGMR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
L W+ +PL + +AI++R A + + ++ R +L + +L+G+ D++ L R+ K
Sbjct: 290 QLKNWIDRPLINQEAILKRQAIIQVFLDAFIERADLSD-SLKGVYDIERLTSRVSFGKVN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESL----VQNVEA-----SNLNTILSSLQSLKMMDR--- 377
KD ++ + Q+P++ SIL ++ + ++ A S L ++SS S +
Sbjct: 349 PKDLLQLGHTLGQVPQIKSILSAIGSPCLDDLTAAIDPISELEALISSAISKEAPATISE 408
Query: 378 ----KDAVMDKMKEYLESTARRLNLVADKTIKLE------------NSPQGFAYRITMKL 421
+ DK+ Y + +A+ +K N G+ + +T
Sbjct: 409 GNIIRTGFDDKLDHYRKVMKEGTGWIAEIELKERQASGINNLKIDYNKKDGYYFHVTNSN 468
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
++ + + T++ R+ LA Q + E + I + Y
Sbjct: 469 LANVPEHFFRKATLKNSERYGTAELAKIEGQMLEAREESSNLEYDIFMSIRARVETYIDR 528
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SY 540
L L+ +A DVL S ++ YVRP + ++ RH +VE GV Y
Sbjct: 529 LQSLAKAIATVDVLQSLAV--VAERNHYVRPEFNREHI--IAIDNGRHAVVEKVMGVQEY 584
Query: 541 IPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFT 600
IPN ++F S + + L+TGPNM GKSTY+R + ++V +AQ+G +V D A + + D IFT
Sbjct: 585 IPNSIHFDS-QTAIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAADKAQLPIFDAIFT 643
Query: 601 RVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAREL 660
R+GAAD G STFM+EM E IK+ +++SL++ DELGRGT+T+DG +A SI +
Sbjct: 644 RIGAADDLISGQSTFMVEMMEANHAIKRASDSSLILFDELGRGTATYDGMALAQSIIEYI 703
Query: 661 ASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHC 720
+ T+FATH+HE+ LS + + NV VS LE++ + L+++ G KSYG+H
Sbjct: 704 HDKVKAKTMFATHYHELTSLSTKLTSLENVHVSTLEKDGEVTFLHKISQGPADKSYGIHV 763
Query: 721 AKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQ 767
AK+AG P D+L++A ++ + E +T +T + E+E Q
Sbjct: 764 AKIAGLPADLLQRADHILSKLESQSETTQGLDQKTQSMEKEQLTLFQ 810
>gi|89100701|ref|ZP_01173557.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
gi|89084576|gb|EAR63721.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
Length = 883
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 279/528 (52%), Gaps = 54/528 (10%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD +T G R+L QW+ +PL D +AI RH+ V L+++ AR +L E L+ +
Sbjct: 277 SLLWLLDETKTAMGARMLKQWIDRPLIDKEAIGRRHSLVQSLLDDYFARQDLRE-KLKEV 335
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA R+ +D ++ + Q+P L ++ L QN +A L L + + +
Sbjct: 336 YDLERLAGRVAFGNVNARDLIQLKSSLLQVPLLKELVGGL-QNEDAKALAEKLDACEEIT 394
Query: 373 -----KMMDR-----------KDAVMDKMKEYLESTARRLNLVAD-----------KTIK 405
++D +D D++ +Y +++ +A K++K
Sbjct: 395 DLLESAIVDNPPISVKDGNMIRDGYHDELDQYRDASRNGKTWIAQLEAQERERTGIKSLK 454
Query: 406 LE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQ 457
+ N G+ +T K N + + RY T+ R+ L T + + +
Sbjct: 455 IGYNRVFGYYIEVT-KANIHLLEEGRYDRKQTLANAERYITPELKEKETLILEAEERITE 513
Query: 458 REYET--HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
EYE H + V+E Y L L+ +++ DVL F A + YVRP
Sbjct: 514 LEYELFCHVRDHVKE-------YIPRLQSLARTVSELDVLQCF--AQISEDRHYVRPVFS 564
Query: 516 PMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
G + + + RHP+VE + Y+PND G L+TGPNM GKSTY+R + +
Sbjct: 565 --GNREISVKEGRHPVVEKVMDSQEYVPNDCVMGDGR-ELLLITGPNMSGKSTYMRQVAL 621
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
+ LAQIGC+VP A + + DQ+FTR+GAAD G STFM+EM E I T+NSL
Sbjct: 622 TSILAQIGCYVPASEAVLPIFDQVFTRIGAADDLISGQSTFMVEMLEAKNAIANATQNSL 681
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
++ DE+GRGTST+DG +A +I + S TLF+TH+HE+ +L+ +P +N+ VSA
Sbjct: 682 ILFDEIGRGTSTYDGMALAQAIIEYIHSRIGAKTLFSTHYHELTVLAEELPDLQNIHVSA 741
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+EQ +V L+++K G+ KSYG+H A++A P +++++A +++++ E
Sbjct: 742 IEQNGKVVFLHKIKEGAADKSYGIHVAQLAELPSELIDRANEILEKLE 789
>gi|257899421|ref|ZP_05679074.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
gi|257837333|gb|EEV62407.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
Length = 881
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 341/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLAVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ +++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISAADVLQSF--ATISERYQYVRPELVS-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADKSYGIHVAKIAGLPANLLERAADILHTLE 792
>gi|375088944|ref|ZP_09735281.1| DNA mismatch repair protein MutS [Dolosigranulum pigrum ATCC 51524]
gi|374561111|gb|EHR32460.1| DNA mismatch repair protein MutS [Dolosigranulum pigrum ATCC 51524]
Length = 868
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 191/635 (30%), Positives = 323/635 (50%), Gaps = 73/635 (11%)
Query: 186 LPEMCLTTATHCLRSLINYLEL--MNNEDNMNQFSIHSID----YSKYVHMSSAVMSSLH 239
+PE LT A L L++YL M D++ Q ++ +D Y K + + +SL
Sbjct: 217 VPEGPLTKA---LDVLLHYLAQTQMRQLDHLQQAEVYEMDHFLVYGKEARRNLELTTSLR 273
Query: 240 VLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNT 299
++G+ LL +LD +T G R+L W+ +PL +D I ERH ++ L++
Sbjct: 274 DGTKEGT--------LLWLLDETKTAMGGRMLKSWLDKPLIHVDGIQERHLLIDSLMHYF 325
Query: 300 EARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQ 355
R +L L+ + D++ LA R+ +D ++ + + +P L +L+ + V
Sbjct: 326 LERSDLIA-VLKEVYDLERLAGRVAYGSVNARDLIQLKQSLQMIPHLREMLQLMNDEGVW 384
Query: 356 NVEASNLNTILSSLQSLKMMDRKDAVM-------------DKMKEYLESTARRLNLVAD- 401
+ + L+ ++ ++ +++ + +++ +YL + + +AD
Sbjct: 385 DQVLAQLDPVVEVADLIERAIQEEPPLSVTEGEIINFGFDEQLDKYLSAMSNGKQWIADL 444
Query: 402 ----------KTIKLE-NSPQGFAYRITMKLNNSID-DRYTILDTVRGGVRF-------Q 442
K +K+ N G+ +T +D DRY T+ R+ +
Sbjct: 445 QAQEREQTGIKNLKVGFNKVFGYYIEVTKSHIEKVDLDRYERKQTLANSERYITPELKEK 504
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+ + A + QA+ EYE Q + EEV GY + + L+ +A+ DVL SF A
Sbjct: 505 ESLILGAEEKSQAL--EYELFIQ-VREEV----KGYIKRIQSLAKAVAKVDVLQSF--AE 555
Query: 503 TCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
YV+P + +V+ RHP+VE + SY+PND+ + E L+TGPN
Sbjct: 556 VSETYNYVKPTYH-TDSQDIVIESGRHPVVEKVMNDQSYVPNDIEM-TNETDILLITGPN 613
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
M GKSTY+R + + V + Q+GCFVP A++ + DQIFTR+GA D + G STFM+EM E
Sbjct: 614 MSGKSTYMRQLALIVIMGQMGCFVPASHASLPLFDQIFTRIGAMDDLFGGQSTFMVEMNE 673
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
T I+ T SL++ DE+GRGT+T+DG +A +I + + TLF+TH+HE+ LS
Sbjct: 674 TNHAIQNATSRSLLLFDEIGRGTATYDGMALAEAIIEYVHNRIGAKTLFSTHYHELTELS 733
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY 741
+ + N+ V A+E+ +LV L+++KPG KSYGV A++AG PED+L++A ++++
Sbjct: 734 KRLDKLENIHVGAVEERGSLVFLHKIKPGPGDKSYGVQVAQLAGLPEDLLDRASMILRDL 793
Query: 742 EYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDF 776
E + G + +E TV+E Q+ F
Sbjct: 794 EQT------KGATISQASDEAVTTVEETTEQLALF 822
>gi|430836453|ref|ZP_19454433.1| DNA mismatch repair protein mutS [Enterococcus faecium E0680]
gi|431380434|ref|ZP_19510815.1| DNA mismatch repair protein mutS [Enterococcus faecium E1627]
gi|431506813|ref|ZP_19515639.1| DNA mismatch repair protein mutS [Enterococcus faecium E1634]
gi|430488413|gb|ELA65092.1| DNA mismatch repair protein mutS [Enterococcus faecium E0680]
gi|430582302|gb|ELB20729.1| DNA mismatch repair protein mutS [Enterococcus faecium E1627]
gi|430587200|gb|ELB25433.1| DNA mismatch repair protein mutS [Enterococcus faecium E1634]
Length = 881
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAADVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|239826703|ref|YP_002949327.1| DNA mismatch repair protein MutS [Geobacillus sp. WCH70]
gi|259511169|sp|C5D9H5.1|MUTS_GEOSW RecName: Full=DNA mismatch repair protein MutS
gi|239806996|gb|ACS24061.1| DNA mismatch repair protein MutS [Geobacillus sp. WCH70]
Length = 860
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 291/580 (50%), Gaps = 57/580 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D+M ++ +D+ +M + S ++ + S SLL +LD T G RLL
Sbjct: 239 DHMQSVQVYQVDH----YMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTAMGGRLL 294
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL D I R V L+++ R L E LR + D++ LA R+ +
Sbjct: 295 KQWLDRPLLDRKQIERRLHMVETLIHHYFERQELRE-RLREVYDVERLAGRVAYGNVNAR 353
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL-KMMDR------------- 377
D ++ + + Q+P L I+E L + EA L L L +++R
Sbjct: 354 DLIQLKKSLQQIPALKDIVEKLPDH-EAKQLANKLDPCSELVDLLERSIQENPPLSVKEG 412
Query: 378 ---KDAVMDKMKEY-------------LESTARRLNLVADKTIKLE-NSPQGFAYRITM- 419
KD + + Y LES R L + K++K+ N G+ +T
Sbjct: 413 NIIKDGYNETLDRYRDASRNGKAWIAQLESKERELTGI--KSLKIGYNRVFGYYIEVTKP 470
Query: 420 KLNNSIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
L+ RY T+ RF ++ + ++I+ EYE I E V
Sbjct: 471 NLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFV-DIRERV--- 526
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
Y L L+ +++ DVL SF A+ + YV+P L++ RHP+VE
Sbjct: 527 -KQYIPRLQSLAKTISELDVLQSF--ATVSEERHYVKPQFS--DNRELIIQAGRHPVVEK 581
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G +Y+PND Y + E L+TGPNM GKSTY+R I ++V +AQIGCFVP + A +
Sbjct: 582 VLGAQTYVPNDCYM-NKERELLLITGPNMSGKSTYMRQIALTVIMAQIGCFVPAEKAVLP 640
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+GRGTST+DG +A
Sbjct: 641 IFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGMALA 700
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
+I + H TLF+TH+HE+ L + + +NV V A+E+ +V L++++ G
Sbjct: 701 QAIIEYIHDHIGAKTLFSTHYHELTDLEQSLAKLKNVHVRAVEENGKVVFLHKIEEGPAD 760
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK-TPSG 752
+SYG+H A++A P ++++A++++ E E K PSG
Sbjct: 761 QSYGIHVAELAELPASLIQRAKEILAELEQQEQRKEQPSG 800
>gi|365924441|ref|ZP_09447204.1| DNA mismatch repair protein MutS [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|420265396|ref|ZP_14767956.1| DNA mismatch repair protein MutS [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|394428128|gb|EJF00719.1| DNA mismatch repair protein MutS [Lactobacillus mali KCTC 3596 =
DSM 20444]
Length = 875
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 182/602 (30%), Positives = 310/602 (51%), Gaps = 73/602 (12%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
+ S + + +LL +LD +T G RLL QW+ +PL + + I R+ V +L+++ R
Sbjct: 268 ENSRTGKKAGTLLWLLDETKTAMGGRLLKQWIDRPLLEKEKITRRYNMVKLLLDHYFERS 327
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
L E L + D++ LA R+ +D ++ + + Q+PK+ +LE+ + +L
Sbjct: 328 ALQE-DLTQVYDLERLAGRVAFGSVNGRDLIQLKQSLQQVPKIKYVLET----INDGSLT 382
Query: 364 TILSSLQSLK---------MMDRK------------------DAVMDKMK---EYLESTA 393
+I+ L ++ ++D D+ D MK ++L
Sbjct: 383 SIIEELDPVEDVVDLIEQAIVDEPPLSVTDGGLIKEGYNSELDSYTDAMKNGKKWLAQME 442
Query: 394 RR-LNLVADKTIKLENSPQGFAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLATA 449
++ ++ T+K+ + F Y I + N ++RY T+ RF L
Sbjct: 443 KKERDITGISTLKI-GFNRVFGYFIEVSKANLAKLPEERYQRKQTLTNAERFITPELKEK 501
Query: 450 -----NTQYQAIQREYETH---QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIA 501
Q +A EY ++ I +++ + L +L+ +A DV+ F++
Sbjct: 502 EELILGAQGKATDLEYRLFVDIRERIKDQI--------KRLQRLAKAIAALDVVQGFAVV 553
Query: 502 STCAPKPYVRPCMKPMGTGSLVLNQCRHPIV-ELQGGVSYIPNDVYFKSGEVSFNLVTGP 560
S + +V P + G + + HP+V E+ G SY+PNDV +++ L+TGP
Sbjct: 554 SER--QHFVMPKLIENGN-DVEIKDGWHPVVQEVMGKQSYVPNDVIMPK-DLNILLITGP 609
Query: 561 NMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMK 620
NM GKSTY+R + ++V +AQIGCFVP DSA + + DQIFTR+GAAD G STFM+EMK
Sbjct: 610 NMSGKSTYMRQLALTVVMAQIGCFVPADSAKLPIFDQIFTRIGAADDLIAGQSTFMVEMK 669
Query: 621 ETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALL 680
E I+ T NSL++ DE+GRGT+T+DG +A +I + H TLF+TH+HE+ L
Sbjct: 670 EANQAIEHATSNSLILFDEIGRGTATYDGMALAQAIIEYVHDHVHAKTLFSTHYHELTGL 729
Query: 681 SRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
S +P N+ V A+E+ +L+ L++++PG KSYGVH AK+AG P +L++A +++
Sbjct: 730 SESLPELENIHVGAIEKNGDLIFLHKMQPGPADKSYGVHVAKLAGMPAVLLKRATEILTA 789
Query: 741 YEYS----------LDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQKDTN 790
E LD SG + + ++ +T++E + +F ++ LS ++K +
Sbjct: 790 LESDAKDTSRAATVLDDVQSSGQKEKVKNDQ--ETIEEEQLSLFGPPKKKLSNRREKVMH 847
Query: 791 RI 792
+I
Sbjct: 848 KI 849
>gi|336235959|ref|YP_004588575.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362814|gb|AEH48494.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidasius
C56-YS93]
Length = 864
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 284/565 (50%), Gaps = 56/565 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D+M ++ +D+ +M + S ++ + S SLL +LD T G RLL
Sbjct: 239 DHMQPVQVYQVDH----YMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTAMGGRLL 294
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL D I R V L+++ R L E LR + D++ LA R+ +
Sbjct: 295 KQWLDRPLLDRGQIERRLHMVETLIHHYFERQELRE-RLREVYDVERLAGRVAYGNVNAR 353
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNL--------------------NTILSSLQS 371
D ++ + + Q+P L I+ L N +A L N LS +
Sbjct: 354 DLIQLKKSLQQIPALKDIVAKLADN-QAQQLADKLDPCSELVDLLERSIQENPPLSVKEG 412
Query: 372 LKMMDRKDAVMDKMKEY----------LESTARRLNLVADKTIKLE-NSPQGFAYRITM- 419
+ D + +D+ ++ LES R L + K++K+ N G+ +T
Sbjct: 413 NIIKDGYNETLDRFRDASRNGKSWIAQLESKERELTGI--KSLKIGYNRVFGYYIEVTKP 470
Query: 420 KLNNSIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
L+ RY T+ RF ++ + ++I+ EYE I E V
Sbjct: 471 NLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFV-DIRERV--- 526
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
Y L L+ +++ DVL SF A+ + YV+P LV+ RHP+VE
Sbjct: 527 -KQYIPRLQSLAKAISELDVLQSF--ATVSEERHYVKPQFSEHR--ELVIQAGRHPVVEK 581
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G +Y+PND Y E L+TGPNM GKSTY+R I ++ +AQIGCFVP D A +
Sbjct: 582 VLGTQTYVPNDCYMNK-ERELLLITGPNMSGKSTYMRQIALTAIMAQIGCFVPADKAVLP 640
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+GRGTST+DG +A
Sbjct: 641 IFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGMALA 700
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
+I + H TLF+TH+HE+ L + +P +NV VSA+E+ +V L++++ G
Sbjct: 701 QAIIEYIHDHIGAKTLFSTHYHELTDLEQSLPKLKNVHVSAVEENGKVVFLHKIEEGPAD 760
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLM 738
+SYG+H A++AG P ++ +A +++
Sbjct: 761 QSYGIHVAELAGLPSSLIRRAEEIL 785
>gi|302024621|ref|ZP_07249832.1| DNA mismatch repair protein MutS [Streptococcus suis 05HAS68]
gi|330833728|ref|YP_004402553.1| DNA mismatch repair protein MutS [Streptococcus suis ST3]
gi|329307951|gb|AEB82367.1| DNA mismatch repair protein MutS [Streptococcus suis ST3]
Length = 846
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 188/635 (29%), Positives = 317/635 (49%), Gaps = 57/635 (8%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + + G +E E+ +N L+ F+D ++ +L+ L++YL
Sbjct: 169 RARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKAAAGKLLSYLH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
D + + + Y+ M A SSL +L + + + + SL +LD +T
Sbjct: 229 RTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLL--ENGRTGKKHGSLYWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL DL I R A V + ++ R +L E AL+G+ D++ LA R+
Sbjct: 287 GMRLLRTWIDRPLIDLKRIENRQAIVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESL----VQNVEAS-----NLNTILSS--------- 368
K KD ++ + + +P + +IL+ + + N+ A L+ ++SS
Sbjct: 346 KTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHALISSAIDPEAQGT 405
Query: 369 --------------LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGF 413
L +++ R+ A E E A +N +K++ N G+
Sbjct: 406 ITDGNIIRTGFDETLDQYRLVIREGAGWIAEIEAKEREASGIN-----NLKIDYNKKDGY 460
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIV 468
+ +T ++ D + T++ R+ + LA Q ++ EYE + I
Sbjct: 461 YFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMR-IR 519
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+EV Y L +L+ +A DVL +F++ A + ++ C + L +++ R
Sbjct: 520 QEV----EKYIGRLQKLARTIATIDVLQAFAV---VAEQQHL-VCPRFTDQRELTIDRGR 571
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN ++ + + L+TGPNM GKSTY+R + V V +AQ+G +VP
Sbjct: 572 HAVVEKVMGKQTYIPNSIHLNT-DTHMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPA 630
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D IFTR+GAAD G STFM+EM E ++ T+ SL++ DELGRGT+T+
Sbjct: 631 DQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATY 690
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + TLFATH+HE+ LS+ + NV VS LE++ + L+++
Sbjct: 691 DGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKI 750
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
G KSYG+H AK+AG PE++L++A +++ E
Sbjct: 751 AQGPADKSYGIHVAKIAGMPEELLQRADRILQTLE 785
>gi|257887935|ref|ZP_05667588.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
gi|430842407|ref|ZP_19460322.1| DNA mismatch repair protein mutS [Enterococcus faecium E1007]
gi|431036500|ref|ZP_19492270.1| DNA mismatch repair protein mutS [Enterococcus faecium E1590]
gi|431753029|ref|ZP_19541707.1| DNA mismatch repair protein mutS [Enterococcus faecium E2620]
gi|257823989|gb|EEV50921.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
gi|430493488|gb|ELA69791.1| DNA mismatch repair protein mutS [Enterococcus faecium E1007]
gi|430563040|gb|ELB02271.1| DNA mismatch repair protein mutS [Enterococcus faecium E1590]
gi|430612777|gb|ELB49808.1| DNA mismatch repair protein mutS [Enterococcus faecium E2620]
Length = 881
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 206/703 (29%), Positives = 340/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLAVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQS-ALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ +++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G +SYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADRSYGIHVAKIAGLPANLLERAADILHTLE 792
>gi|227544212|ref|ZP_03974261.1| DNA mismatch repair protein MutS [Lactobacillus reuteri CF48-3A]
gi|338204107|ref|YP_004650252.1| DNA mismatch repair protein HexA [Lactobacillus reuteri SD2112]
gi|227185805|gb|EEI65876.1| DNA mismatch repair protein MutS [Lactobacillus reuteri CF48-3A]
gi|336449347|gb|AEI57962.1| DNA mismatch repair protein HexA [Lactobacillus reuteri SD2112]
Length = 881
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 177/537 (32%), Positives = 271/537 (50%), Gaps = 41/537 (7%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L +LD +T G RLL +W+ +PL + +AI ER V L+++ R NL +
Sbjct: 270 SGKRQGTLAWLLDETKTAMGSRLLKRWIDRPLINQNAISERQDKVQELLDHYFERSNLQQ 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
++ + D++ LA RI +D ++ + Q+PK+ +LE+L V L L
Sbjct: 330 ELIK-VYDLERLAGRIAYGSVNGRDLIQLKTSLKQVPKIKYVLETLDSPV-FEELQKQLD 387
Query: 368 SLQSLK-MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTI 404
L + ++D+ KD D++ +Y ++ +AD K
Sbjct: 388 PLDDVADLIDQSIVEEPPIAVTEGGVIKDGYNDQLDQYRDAMNNGKQWIADLQEHERKLT 447
Query: 405 KLENSPQG----FAYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+ N G F Y I + LN DRY T+ RF L Q
Sbjct: 448 GINNLKIGYNHVFGYYIEVTKVNLNKLPKDRYERKQTLVNAERFSTPELKEKEALIMGAQ 507
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+ + I ++ G L +L+ LA+ DVL SF++ S +VRP M
Sbjct: 508 EKSTALEYDIFVKIREQVKGQITRLQKLAQQLAELDVLQSFAVVSEDYH--FVRP---KM 562
Query: 518 GTGS-LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
TG L + RHP+VE G Y+PN+V + L+TGPNM GKSTY+R + +
Sbjct: 563 NTGHVLKIKDGRHPVVEKFMGHQEYVPNNVLMGE-DTDILLITGPNMSGKSTYMRQLALI 621
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
+AQIGCFVP SA + + DQ+FTR+GAAD G STFM+EM E + T+ SL+
Sbjct: 622 AVMAQIGCFVPAKSAELPIFDQVFTRIGAADDLISGESTFMVEMMEANNALTHATDRSLI 681
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + H + TLF+TH+HE+ L + +NV V A
Sbjct: 682 LFDEIGRGTATYDGMALAQAIIEYVHQHVRAKTLFSTHYHELTALENSLTRLKNVHVGAT 741
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
E++ LV L++V G KSYG+H AK+AG P +L++A ++++ E D K P+
Sbjct: 742 EKDGELVFLHKVSAGPADKSYGIHVAKLAGMPSLLLKRADTILQKLEQK-DVKLPNA 797
>gi|430823355|ref|ZP_19441926.1| DNA mismatch repair protein mutS [Enterococcus faecium E0120]
gi|430866387|ref|ZP_19481664.1| DNA mismatch repair protein mutS [Enterococcus faecium E1574]
gi|430442068|gb|ELA52116.1| DNA mismatch repair protein mutS [Enterococcus faecium E0120]
gi|430551615|gb|ELA91366.1| DNA mismatch repair protein mutS [Enterococcus faecium E1574]
Length = 881
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 340/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQS-ALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ +++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISAADVLQSF--ATISERYQYVRPELVS-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|423720505|ref|ZP_17694687.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidans
TNO-09.020]
gi|383366560|gb|EID43850.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidans
TNO-09.020]
Length = 864
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 284/565 (50%), Gaps = 56/565 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D+M ++ +D+ +M + S ++ + S SLL +LD T G RLL
Sbjct: 239 DHMQPVQVYQVDH----YMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTAMGGRLL 294
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL D I R V L+++ R L E LR + D++ LA R+ +
Sbjct: 295 KQWLDRPLLDRGQIERRLHMVETLIHHYFERQELRE-RLREVYDVERLAGRVAYGNVNAR 353
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNL--------------------NTILSSLQS 371
D ++ + + Q+P L I+ L N +A L N LS +
Sbjct: 354 DLIQLKKSLQQIPALKDIVAKLADN-QAQQLADKLDPCSELVDLLERSIQENPPLSVKEG 412
Query: 372 LKMMDRKDAVMDKMKEY----------LESTARRLNLVADKTIKLE-NSPQGFAYRITM- 419
+ D + +D+ ++ LES R L + K++K+ N G+ +T
Sbjct: 413 NIIKDGYNETLDRFRDASRNGKSWIAQLESKERELTGI--KSLKIGYNRVFGYYIEVTKP 470
Query: 420 KLNNSIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
L+ RY T+ RF ++ + ++I+ EYE I E V
Sbjct: 471 NLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFV-DIRERV--- 526
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
Y L L+ +++ DVL SF A+ + YV+P LV+ RHP+VE
Sbjct: 527 -KQYIPRLQSLAKAISELDVLQSF--ATVSEERHYVKPQFSEHR--ELVIQAGRHPVVEK 581
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G +Y+PND Y E L+TGPNM GKSTY+R I ++ +AQIGCFVP D A +
Sbjct: 582 VLGTQTYVPNDCYMNK-ERELLLITGPNMSGKSTYMRQIALTAIMAQIGCFVPADKAVLP 640
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+GRGTST+DG +A
Sbjct: 641 IFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGMALA 700
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
+I + H TLF+TH+HE+ L + +P +NV VSA+E+ +V L++++ G
Sbjct: 701 QAIIEYIHDHIGAKTLFSTHYHELTDLEQSLPKLKNVHVSAVEENGKVVFLHKIEEGPAD 760
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLM 738
+SYG+H A++AG P ++ +A +++
Sbjct: 761 QSYGIHVAELAGLPSSLIRRAEEIL 785
>gi|424763746|ref|ZP_18191211.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1337RF]
gi|431757856|ref|ZP_19546485.1| DNA mismatch repair protein mutS [Enterococcus faecium E3083]
gi|402422331|gb|EJV54571.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1337RF]
gi|430618361|gb|ELB55208.1| DNA mismatch repair protein mutS [Enterococcus faecium E3083]
Length = 881
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 208/703 (29%), Positives = 340/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLAVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + + + N H + Y S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQKAVEYQPN------HFLKMDYY--------SKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQS-ALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ ++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEETSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G +SYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADRSYGIHVAKIAGLPANLLERAADILHTLE 792
>gi|422853249|ref|ZP_16899913.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK160]
gi|325697261|gb|EGD39147.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK160]
Length = 849
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 188/643 (29%), Positives = 313/643 (48%), Gaps = 62/643 (9%)
Query: 159 EFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFS 218
E E+ L +N L+ + + L + +LL E L+ Y+ + +
Sbjct: 181 EAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVHRTQMRELSHLKK 240
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+ ++ M A +SL + + + S + + SL ++D +T G R+L W+++P
Sbjct: 241 AQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAMGGRMLRSWIQRP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D I +R V + +++ R +L E +L+G+ D++ LA R+ K KD ++
Sbjct: 299 LIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFGKTNPKDLLQLAA 357
Query: 339 GVSQLPKLISILES--------LVQNV----EASNLNTILSSLQSLKMMDRKDAVMDKMK 386
+ +P++ +IL+ L++++ E + L + S +L ++ + +
Sbjct: 358 TLGNVPQIKAILQGIGSPHLARLIEDLDPIPELAGLISSAISPDALHIITEGNIIRTGFD 417
Query: 387 EYLESTARRL----NLVADKTIKLE------------NSPQGFAYRITMKLNNSIDDRYT 430
E L+ L +A+ +K N G+ + +T + +
Sbjct: 418 ETLDQYRLVLRDGTGWIAELEVKERANSGISNLKIDYNKKDGYYFHVTNSQLAHVPSHFF 477
Query: 431 ILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAGY 478
T++ RF + LA +AN +Y+ R I EE + Y
Sbjct: 478 RKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGKY 525
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGG 537
Q L L+ LA DVL SF A+ VRP L + + RH +VE + G
Sbjct: 526 IQRLQALAQTLAAVDVLQSF--AAVAEQLHLVRPVFT--AERRLQIEKGRHAVVEKVMGA 581
Query: 538 VSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQ 597
SYIPN + E + L+TGPNM GKSTY+R + + V +AQ+G +VP SA++ + D
Sbjct: 582 QSYIPNSILLDQ-ETNIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVPAQSASLPLFDA 640
Query: 598 IFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIA 657
IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+T+DG +A +I
Sbjct: 641 IFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTATYDGMALAQAII 700
Query: 658 RELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYG 717
+ + TLFATH+HE+ L + NV V+ LE++ + L++++PG KSYG
Sbjct: 701 EHIHHYTGAKTLFATHYHELTALENSLEHLENVHVATLEKDGQVTFLHKIEPGPADKSYG 760
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREE 760
+H AK+AG PE +LE+A ++ E S DT S T +R++
Sbjct: 761 IHVAKIAGLPEKLLERADSILSHLE-SQDTGLGSELPTKSRQK 802
>gi|419781976|ref|ZP_14307787.1| DNA mismatch repair protein MutS [Streptococcus oralis SK610]
gi|383183617|gb|EIC76152.1| DNA mismatch repair protein MutS [Streptococcus oralis SK610]
Length = 844
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 314/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDLHLLDSRLAAVEQAAASKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKTSLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKKRIVQRQDVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ ILE + Q A L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRVILEGMEQPALAYLIEQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV + Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----SKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIQ 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNSIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAIMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T++SL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLEHLINVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P ++L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPGELLARADKILTQLE 785
>gi|425054250|ref|ZP_18457763.1| DNA mismatch repair protein MutS [Enterococcus faecium 505]
gi|403036518|gb|EJY47866.1| DNA mismatch repair protein MutS [Enterococcus faecium 505]
Length = 881
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 340/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQS-ALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ +++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISTADVLQSF--ATISERYQYVRPELVS-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADKSYGIHVAKIAGLPANLLERAADILHTLE 792
>gi|422822661|ref|ZP_16870854.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK353]
gi|324989669|gb|EGC21613.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK353]
Length = 849
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 192/656 (29%), Positives = 318/656 (48%), Gaps = 62/656 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + +++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRK--- 378
K KD ++ + +P++ +IL+ L + +E + L+SL S ++
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPIPELASLISSAILPDAPHI 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +D+ + L E T L + +K++ N G+ + +T
Sbjct: 406 ITEGNIIRTDFDETLDQYRLVLREGTGWIAELEVKERANSGISNLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
+ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I EE + Y Q L L+ LA DVL SF A+ + VRP L + +
Sbjct: 518 IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPVFT--AERRLQIEK 569
Query: 527 CRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +V
Sbjct: 570 GRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYV 628
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+
Sbjct: 629 PAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTA 688
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++ + L+
Sbjct: 689 TYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALEDSLEHLENVHVATLEKDGQVTFLH 748
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEE 761
+++PG KSYG+H AK+AG PE +LE+A ++ E S DT S T +R ++
Sbjct: 749 KIEPGPADKSYGIHVAKIAGLPEKLLERADSILSHLE-SQDTGLGSELPTASRPKQ 803
>gi|194397405|ref|YP_002038666.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae G54]
gi|238690807|sp|B5E385.1|MUTS_STRP4 RecName: Full=DNA mismatch repair protein MutS
gi|194357072|gb|ACF55520.1| DNA mismatch repair protein HexA [Streptococcus pneumoniae G54]
Length = 844
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKM------- 374
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 375 --------------MDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE-NSPQGFAYRIT 418
+D+ V + ++ E A+ T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYXCVXREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KS G+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSXGIHVAKIAGLPADLLARADKILXQLE 785
>gi|293570767|ref|ZP_06681817.1| DNA mismatch repair protein MutS [Enterococcus faecium E980]
gi|431081632|ref|ZP_19495722.1| DNA mismatch repair protein mutS [Enterococcus faecium E1604]
gi|431118176|ref|ZP_19498130.1| DNA mismatch repair protein mutS [Enterococcus faecium E1613]
gi|431738993|ref|ZP_19527933.1| DNA mismatch repair protein mutS [Enterococcus faecium E1972]
gi|431740727|ref|ZP_19529638.1| DNA mismatch repair protein mutS [Enterococcus faecium E2039]
gi|291609239|gb|EFF38511.1| DNA mismatch repair protein MutS [Enterococcus faecium E980]
gi|430565564|gb|ELB04710.1| DNA mismatch repair protein mutS [Enterococcus faecium E1604]
gi|430568133|gb|ELB07190.1| DNA mismatch repair protein mutS [Enterococcus faecium E1613]
gi|430596536|gb|ELB34360.1| DNA mismatch repair protein mutS [Enterococcus faecium E1972]
gi|430602810|gb|ELB40360.1| DNA mismatch repair protein mutS [Enterococcus faecium E2039]
Length = 881
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 340/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLAVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQS-ALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ +++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISAADVLQSF--ATISERYQYVRPELVN-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADKSYGIHVAKIAGLPANLLERAADILHTLE 792
>gi|293377536|ref|ZP_06623731.1| DNA mismatch repair protein MutS [Enterococcus faecium PC4.1]
gi|292643851|gb|EFF61966.1| DNA mismatch repair protein MutS [Enterococcus faecium PC4.1]
Length = 670
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 280/539 (51%), Gaps = 55/539 (10%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
Q + + + +LL +LD +T G RLL QW+ +PL I R V L+++ R+
Sbjct: 58 QSIRTGKKHGTLLWLLDETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERI 117
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+L + AL + D++ LA R+ +D ++ + Q+P ++ L++ ++
Sbjct: 118 DL-QSALTKVYDLERLAGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQ 172
Query: 364 TILSSLQSL----KMMDR----------------KDAVMDKMKEY-------------LE 390
++LS +Q + +++D+ KD +++ Y LE
Sbjct: 173 SLLSEMQPMDHLVQLIDQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELE 232
Query: 391 STARRLNLVADKTIKLENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATA 449
+ R+ + + I N G+ IT L N+ ++Y T+ RF L
Sbjct: 233 AKERQETGIKNLKIGF-NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKEL 291
Query: 450 NTQY-----QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
TQ +++ EY+ ++ EEV Q L L+ ++ DVL SF A+
Sbjct: 292 ETQILEAEEKSVDLEYQLFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATIS 344
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
YVRP + L++ RHP+VE + G YIPN V E+ L+TGPNM
Sbjct: 345 ERYQYVRPELVS-DKHQLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMS 402
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + ++V +AQ+GCFVP A + + D+IFTR+GA+D G STFM+EM E
Sbjct: 403 GKSTYMRQLALTVLMAQMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEAN 462
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
++ T NSL++ DELGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L +
Sbjct: 463 QALRYATPNSLILFDELGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKE 522
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+P +NV V A+E++ +V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 523 LPQLKNVHVGAVEKDGEVVFLHKMMDGPADKSYGIHVAKIAGLPANLLERAADILHTLE 581
>gi|430834798|ref|ZP_19452800.1| DNA mismatch repair protein mutS [Enterococcus faecium E0679]
gi|430484867|gb|ELA61814.1| DNA mismatch repair protein mutS [Enterococcus faecium E0679]
Length = 881
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 209/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + + + + IDY S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQKAVEYQPD----HFLKIDY----------YSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAADVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDWIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|422847755|ref|ZP_16894438.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK72]
gi|325686753|gb|EGD28779.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK72]
Length = 849
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 316/660 (47%), Gaps = 72/660 (10%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + +N+ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDKARISQRQNVVEVFLNHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCY-------------------------RVYEGVSQLPKLISILESLVQ------ 355
K KD R+ EG+ +P+L ++ S +
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAISPDAPHI 405
Query: 356 ----NVEASNLNTILSSLQSLKMMDRKDAVMD-KMKEYLESTARRLNLVADK-------- 402
N+ + + L + L + D + + ++KE S L + +K
Sbjct: 406 ITEGNIIRTGFDETLDQYR-LVLRDGTGWIAELEVKERANSGISNLKIDYNKKDGYYFHV 464
Query: 403 -TIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+L + P F + T+K NS +R+ + R + R +AN +Y+ R
Sbjct: 465 TNSQLAHVPSHFFRKATLK--NS--ERFGTEELARIEGEMLESREKSANLEYEIFMR--- 517
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
I EE + Y Q L L+ LA DVL SF A+ VRP
Sbjct: 518 -----IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQLHLVRPVFT--AERC 564
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L + + RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ
Sbjct: 565 LQIEKGRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQ 623
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G +VP SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DEL
Sbjct: 624 MGSYVPAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDEL 683
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++
Sbjct: 684 GRGTATYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALEESLEHLENVHVATLEKDGQ 743
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREE 760
+ L++++PG KSYG+H AK+AG PE +LE+A +++ E S DT S T +R++
Sbjct: 744 VTFLHKIEPGPADKSYGIHVAKIAGLPEKLLERADNILSHLE-SQDTGLGSELPTESRQK 802
>gi|425058567|ref|ZP_18461945.1| DNA mismatch repair protein MutS [Enterococcus faecium 504]
gi|403038160|gb|EJY49393.1| DNA mismatch repair protein MutS [Enterococcus faecium 504]
Length = 881
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 206/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N E+ +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-ESSALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|430850781|ref|ZP_19468538.1| DNA mismatch repair protein mutS [Enterococcus faecium E1185]
gi|430535140|gb|ELA75563.1| DNA mismatch repair protein mutS [Enterococcus faecium E1185]
Length = 881
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 206/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N E+ +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-ESSALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|431439105|ref|ZP_19513286.1| DNA mismatch repair protein mutS [Enterococcus faecium E1630]
gi|431760154|ref|ZP_19548757.1| DNA mismatch repair protein mutS [Enterococcus faecium E3346]
gi|430586780|gb|ELB25028.1| DNA mismatch repair protein mutS [Enterococcus faecium E1630]
gi|430625258|gb|ELB61906.1| DNA mismatch repair protein mutS [Enterococcus faecium E3346]
Length = 881
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 172/538 (31%), Positives = 277/538 (51%), Gaps = 53/538 (9%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
Q + + + +LL +LD +T G RLL QW+ +PL I R V L+++ R+
Sbjct: 269 QSIRTGKKHGTLLWLLDETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERI 328
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+L + AL + D++ LA R+ +D ++ + Q+P ++ L++ ++
Sbjct: 329 DL-QSALTKVYDLERLAGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQ 383
Query: 364 TILSSLQSL------------------------------KMMDRKDAVMDKMKEYL-EST 392
++LS +Q + + +D + M K++L E
Sbjct: 384 SLLSEMQPMDHLVQLIDQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELE 443
Query: 393 ARRLNLVADKTIKLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATAN 450
A+ K +K+ N G+ IT L N+ ++Y T+ RF L
Sbjct: 444 AKERQETGIKNLKIGFNRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELE 503
Query: 451 TQY-----QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCA 505
TQ +++ EY+ ++ EEV Q L L+ ++ DVL SF A+
Sbjct: 504 TQILEAEEKSVDLEYQLFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISE 556
Query: 506 PKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
YVRP + L++ RHP+VE + G YIPN V E+ L+TGPNM G
Sbjct: 557 RYQYVRPELVS-DKHQLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSG 614
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTY+R + ++V +AQ+GCFVP A + + D+IFTR+GA+D G STFM+EM E
Sbjct: 615 KSTYMRQLALTVLMAQMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQ 674
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
++ T NSL++ DELGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +
Sbjct: 675 ALRYATPNSLILFDELGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKEL 734
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
P +NV V A+E++ +V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 735 PQLKNVHVGAVEKDGEVVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|149183368|ref|ZP_01861804.1| DNA mismatch repair protein [Bacillus sp. SG-1]
gi|148848911|gb|EDL63125.1| DNA mismatch repair protein [Bacillus sp. SG-1]
Length = 874
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 214/770 (27%), Positives = 372/770 (48%), Gaps = 99/770 (12%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPD--DDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTI 144
NT +A DL T + + ++ D+ + L I KE ++ +E+ + K K+V
Sbjct: 136 NTAALAYSDLSTGETKVTQLSASFDETVNELATI----GAKEVVVHSEFDEELKRKLV-- 189
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
DR V ++ F E D N R +LK +L +C L+NY
Sbjct: 190 -DRTGVTIS------FENE---TDTNENYRLLLDDLKQDKLTKTVC---------RLLNY 230
Query: 205 L-----ELMNNEDNMNQFSIH---SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLL 256
L +++ + + IH IDY Y + + ++ ++GS LL
Sbjct: 231 LFRTQKRSLDHLQKVETYQIHQFMKIDY--YSKRNLELTETIRAKGKKGS--------LL 280
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
+LD T G R+L +W+ +PL D I +RH+ V +L R ++ + L+ + D+
Sbjct: 281 WLLDETMTAMGARMLKRWIDRPLIDQKEIEKRHSMVQLLQERFFEREDIRDL-LKEVYDL 339
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-----LSSLQS 371
+ LA R+ +D ++ + + Q+P L +I+ L ++ L +I L+ +
Sbjct: 340 ERLAGRVAFGNVNARDLIQLRKSLGQIPLLKNIIGELGHDIADEILKSIDPCDELTGMLH 399
Query: 372 LKMMDR-----------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-N 408
+ D+ KD +++ +Y +++ +A +++K+ N
Sbjct: 400 DSLHDQPPLSIKEGNIIKDGYHEELDQYRDASRNGKTWIAQLEREERERTGIRSLKVGYN 459
Query: 409 SPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYE 461
G+ +T K N + + RY T+ RF ++ ++I+ EY+
Sbjct: 460 RVFGYYIEVT-KANLGLLEEGRYERKQTLTNAERFITPELKEKEALILQADEKSIELEYD 518
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
+I E V Y L +L+ V+++ DVL F A+ + YV+P
Sbjct: 519 LFL-NIRETV----KEYIPRLQKLARVVSEIDVLQCF--ATVSEKRHYVKPSFNR--DRK 569
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+++ RHP+VE + Y+PND Y E LVTGPNM GKSTY+R + ++ LAQ
Sbjct: 570 IMITDGRHPVVEKVMDAQEYVPNDCYMDQ-EREILLVTGPNMSGKSTYMRQLALTAILAQ 628
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IGC+VP A++ + DQ+FTR+GAAD G STFM+EM E I T++SL++ DE+
Sbjct: 629 IGCYVPAKEASLPIFDQVFTRIGAADDLISGQSTFMVEMLEAKNAITNATQDSLILFDEI 688
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST+DG +A +I + + + TLF+TH+HE+ +L + + +N+ VSA+E N
Sbjct: 689 GRGTSTYDGMALAQAIIEYIHENIKAKTLFSTHYHELTVLEQELANVKNIHVSAMEHNGN 748
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREE 760
LV L+++K G+ KSYG+H A++A PE+++ +A +++++ E D P + + +
Sbjct: 749 LVFLHKIKEGAADKSYGIHVAQLAELPENLIVRANEILEKLEQKTDN-NPGRNASYQQTS 807
Query: 761 EYFKTVQEGEYQMFDFLQQCLSLSKQKDTNRILHLQETQEPGIEEYQSFD 810
+ + QE + F Q+ + + L + + IEE +SFD
Sbjct: 808 KVAEKTQEEQPAQLSFFQEDKKVQQSGG-----DLSKKERKLIEELKSFD 852
>gi|21911342|ref|NP_665610.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS315]
gi|28896716|ref|NP_803066.1| DNA mismatch repair protein MutS [Streptococcus pyogenes SSI-1]
gi|342165160|sp|P0DC60.1|MUTS_STRP3 RecName: Full=DNA mismatch repair protein MutS
gi|342165161|sp|P0DC61.1|MUTS_STRPQ RecName: Full=DNA mismatch repair protein MutS
gi|21905557|gb|AAM80413.1| putative DNA mismatch repair protein [Streptococcus pyogenes
MGAS315]
gi|28811970|dbj|BAC64899.1| putative DNA mismatch repair protein [Streptococcus pyogenes SSI-1]
Length = 851
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 312/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|423069768|ref|ZP_17058553.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0395]
gi|355363642|gb|EHG11378.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0395]
Length = 852
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 177/590 (30%), Positives = 301/590 (51%), Gaps = 72/590 (12%)
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+H + ++ M A M+SL + + + + + + SL ++D +T G RLL +W++QP
Sbjct: 241 VHHYEIKDFLQMDYATMASLDL--TENARTGKKHGSLYWLMDETKTAMGTRLLRRWIQQP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D + I++R V + ++ R +L + +L+G+ D++ LA R+ K KD ++
Sbjct: 299 LIDKERILKRQDVVQVFLDYFFERSDLAD-SLKGVYDIERLASRVSFGKTNPKDLLQLAA 357
Query: 339 GVSQLPKLISILES--------LVQNVEASNLNTILSSLQSLKMMDRK------------ 378
+S +P++ IL+ L++N++ ++ + + +QS D
Sbjct: 358 TLSNVPQIKGILQGIDHPVLGQLIENLD--DIPELANLIQSAISPDAPNVITEGNIIQTG 415
Query: 379 -DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKLNNSIDDR 428
D +DK + L + + K +K++ N G+ + +T +
Sbjct: 416 FDETLDKYRVVLRDGTSWIADIEAKERAASGINNLKIDYNKKDGYYFHVTNSQLEHVPSH 475
Query: 429 YTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISA 476
+ T++ RF + LA +AN +Y+ R I EE +
Sbjct: 476 FFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AG 523
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP--CMKPMGTGSLVLNQCRHPIVE- 533
Y + L L+ LA DVL SF++ + +VRP +P S+ +++ RH +VE
Sbjct: 524 KYIKRLQSLAQTLATIDVLQSFAV--VAEKQRFVRPEFIERP----SIEIDKGRHAVVEK 577
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G +YIPN + V+ L+TGPNM GKSTY+R + + V +AQ+G +V +SA +
Sbjct: 578 VMGAQTYIPNSISMDEN-VNVQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLP 636
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ D IFTR+GAAD G STFM+EM E I + TE+SL++ DELGRGT+T+DG +A
Sbjct: 637 IFDAIFTRIGAADDLVSGQSTFMVEMMEANHAISQATEHSLILFDELGRGTATYDGMALA 696
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
+I + + TLFATH+HE+ LS + NV V+ LE++ + L++++ G
Sbjct: 697 QAIIEYIHNRTGAKTLFATHYHELTDLSTSLTQLENVHVATLEKDGQVTFLHKIEAGPAD 756
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK---TPSGDETNNREE 760
KSYG+H AK+AG P D+L +A ++ E + K PS N+ +E
Sbjct: 757 KSYGIHVAKIAGLPNDLLMRADQILTRLEEQANEKPSLNPSNKGANDSKE 806
>gi|148543760|ref|YP_001271130.1| DNA mismatch repair protein MutS [Lactobacillus reuteri DSM 20016]
gi|184153166|ref|YP_001841507.1| DNA mismatch repair protein MutS [Lactobacillus reuteri JCM 1112]
gi|227363260|ref|ZP_03847392.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM2-3]
gi|325682132|ref|ZP_08161650.1| DNA mismatch repair protein HexA [Lactobacillus reuteri MM4-1A]
gi|189083181|sp|A5VIW9.1|MUTS_LACRD RecName: Full=DNA mismatch repair protein MutS
gi|229620050|sp|B2G6E5.1|MUTS_LACRJ RecName: Full=DNA mismatch repair protein MutS
gi|148530794|gb|ABQ82793.1| DNA mismatch repair protein MutS [Lactobacillus reuteri DSM 20016]
gi|183224510|dbj|BAG25027.1| DNA mismatch repair protein MutS [Lactobacillus reuteri JCM 1112]
gi|227071716|gb|EEI10007.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM2-3]
gi|324978776|gb|EGC15725.1| DNA mismatch repair protein HexA [Lactobacillus reuteri MM4-1A]
Length = 881
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 270/536 (50%), Gaps = 41/536 (7%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L +LD +T G RLL +W+ +PL + +AI ER V L+++ R NL +
Sbjct: 270 SGKRQGTLAWLLDETKTAMGSRLLKRWIDRPLINQNAISERQDKVQELLDHYFERSNLQQ 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
++ + D++ LA R+ +D ++ + Q+PK+ +LE+L V L L
Sbjct: 330 ELIK-VYDLERLAGRVAYGSVNGRDLIQLKTSLKQVPKIKYVLETLDSPV-FEELQKQLD 387
Query: 368 SLQSLK-MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTI 404
L + ++D+ KD D++ +Y ++ + D K
Sbjct: 388 PLDDVADLIDQSIIEEPPIAVTEGGVIKDGYNDQLDQYRDAMNNGKQWIVDLQEHERKLT 447
Query: 405 KLENSPQG----FAYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+ N G F Y I + L+ DRY T+ RF L Q
Sbjct: 448 GINNLKIGYNHVFGYYIEVTKVNLDKLPKDRYERKQTLVNAERFSTPELKEKEALIMGAQ 507
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+ + I ++ G L +L+ LA+ DVL SF++ S +VRP M
Sbjct: 508 EKSTALEYDIFVKIREQVKGQITRLQKLAQQLAELDVLQSFAVVSEDYH--FVRP---EM 562
Query: 518 GTGS-LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
TG L + RHP+VE G Y+PNDV + L+TGPNM GKSTY+R + +
Sbjct: 563 NTGHVLKIKDGRHPVVEKFMGHQEYVPNDVLMGE-DTDILLITGPNMSGKSTYMRQLALI 621
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
+AQIGCFVP SA + + DQ+FTR+GAAD G STFM+EM E + T+ SL+
Sbjct: 622 AVMAQIGCFVPAKSAELPIFDQVFTRIGAADDLISGESTFMVEMMEANNALTHATDRSLI 681
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + H + TLF+TH+HE+ L + +NV V A
Sbjct: 682 LFDEIGRGTATYDGMALAQAIIEYVHQHVRAKTLFSTHYHELTALENSLARLKNVHVGAT 741
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
E++ LV L++V G KSYG+H AK+AG P +L++A ++++ E D K P+
Sbjct: 742 EKDGELVFLHKVSAGPADKSYGIHVAKLAGMPSSLLKRADTILQKLEQK-DVKLPN 796
>gi|293556850|ref|ZP_06675411.1| DNA mismatch repair protein MutS [Enterococcus faecium E1039]
gi|291600934|gb|EFF31225.1| DNA mismatch repair protein MutS [Enterococcus faecium E1039]
Length = 881
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 206/702 (29%), Positives = 338/702 (48%), Gaps = 93/702 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N E+ +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-ESSALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L + AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDL-QSALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------- 372
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q +
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 373 -----------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE- 407
+ +D + M K++L E A+ K +K+
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 408 NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYE 461
N G+ IT L N+ ++Y T+ RF L TQ +++ EY+
Sbjct: 460 NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQ 519
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 520 LFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKHQ 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 572 LLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DEL
Sbjct: 631 MGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 691 GRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGE 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 751 VVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|242786643|ref|XP_002480846.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218720993|gb|EED20412.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1183
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 199/705 (28%), Positives = 331/705 (46%), Gaps = 63/705 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A VD T +FY+ E DD + E I Q P+E LL ++ K + IL N
Sbjct: 441 GIAFVDTATGQFYLSEFKDDADMTKFETFIAQTRPQELLLEKSAVS---QKAMRILKNNT 497
Query: 150 VCMTG----RKKNEFSEEDL-MQDVNRLVRFDDSELKNARLLPEMCLTT-----ATHCLR 199
T + EF E D+ +++++ F E N P++ A
Sbjct: 498 GPTTLWNHLKPGKEFWEADIAIRELDASDYFVSQESDNIDAWPQVLREAREKENAMSAFG 557
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ----QGSTSAQTYDSL 255
+L+ YL ++ + ++ SI + + + +++++ L S + +L
Sbjct: 558 ALVQYLRVLKLDRDL--ISIGNFTWYDPIRKATSLVLDGQTLINLEIFANSFDGGSEGTL 615
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+L+RC TP G R+ QW+ PL D+D I R AV+ L ++ R L +PD
Sbjct: 616 FQLLNRCITPFGKRMFKQWVCHPLMDIDKINARFDAVDALNADSTIRDQFSS-QLTKMPD 674
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLP-----------------KLISILESLVQNVE 358
++ L RI +D RV EG Q+ KL+S + LV +E
Sbjct: 675 LERLISRIHAGACKAQDFLRVLEGFEQIEYTMSLLNDLGSGEGLIGKLVSSMPDLVSPLE 734
Query: 359 ---------ASNLNTILSSLQSLKM-MDRKDAVMDKMKEYLESTAR--RLNLVADKTIKL 406
+ N IL Q ++ D A ++++ LE+ + R L +
Sbjct: 735 YWKTAFDRLKAKENGILVPEQGIEEDFDASQATIEQIHRDLENLLKKSRRELGSTAICYR 794
Query: 407 ENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
+N + + + +K+ N + + + + R+ L + Q Q E+H Q
Sbjct: 795 DNGKEIYQLEVPIKVKN-VPKSWDQMSATKQVKRYYFPELRALVRKLQEAQ---ESHSQ- 849
Query: 467 IVEEVIG-----ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
IV+EV G Y L + ++AQ D L+S + AS+ +P RP
Sbjct: 850 IVKEVAGRFYARFDENYETWLKSIR-IVAQLDCLISLAKASSSLGEPSCRPVFVDNDRSV 908
Query: 522 LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 581
+ + RHP + LQ +IPNDV S NL+TG N GKST +R V+V +AQI
Sbjct: 909 IEFEELRHPCM-LQNVTDFIPNDVQLGGKRASINLLTGANAAGKSTILRMTCVAVIMAQI 967
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
GC++PC SA ++ VD+I +R+GA D+ + STF +E+ ET ++ + T SLVI+DELG
Sbjct: 968 GCYIPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPKSLVILDELG 1027
Query: 642 RGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF--RNVQVSALEQED 699
RGTS++DG +A ++ +A+H FATH+H +A P + +++ ++E
Sbjct: 1028 RGTSSYDGVAVAQAVLHHIATHVGALGFFATHYHSLAAEFENHPEICPKRMRIHVDDEER 1087
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
++ LY+++ G S+G+HCA M G P ++E A K++E++
Sbjct: 1088 RVIFLYKLEDGVAEGSFGMHCASMCGIPNKVIENAEHAAKQWEHT 1132
>gi|431744049|ref|ZP_19532921.1| DNA mismatch repair protein mutS [Enterococcus faecium E2071]
gi|430605677|gb|ELB43059.1| DNA mismatch repair protein mutS [Enterococcus faecium E2071]
Length = 881
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 340/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLSVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQS-ALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ +++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISVADVLQSF--ATISERYQYVRPELVS-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + +P +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G KSYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLE 792
>gi|299822955|ref|ZP_07054841.1| DNA mismatch repair protein MutS [Listeria grayi DSM 20601]
gi|299816484|gb|EFI83722.1| DNA mismatch repair protein MutS [Listeria grayi DSM 20601]
Length = 856
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 283/538 (52%), Gaps = 48/538 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G RLL QW+ +PL D + I +R V + RM+L E+ L+ +
Sbjct: 278 TLLWLLDHTKTAMGGRLLKQWIDRPLIDKEIITQRQDDVAAFIRAFFERMDLVEH-LKNV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSL---- 369
D++ LA R+ +D ++ + Q+PK+ +IL S +E+ +L TI L
Sbjct: 337 YDLERLAGRVAYGNVNARDLIQLRNSLYQIPKIKAILAS----IESDSLQTIADKLDPCE 392
Query: 370 QSLKMMDR----------------KDAVMDKMKEYLESTARRLNLVAD-----------K 402
+ + ++++ KD +++ Y +++ + +A+ K
Sbjct: 393 ELMTILEQAIIDSPPISIREGGIIKDGYNEQLDTYRDASRNGKSWIAELESKEREITGIK 452
Query: 403 TIKLENSPQGFAYRITMKLNNS---IDDRYTILDTVRGGVRFQDDRLATANTQ-YQAIQR 458
++K+ + F Y I + N+ + RY T+ R+ L +A ++
Sbjct: 453 SLKV-GFNRVFGYYIEVTRANTHHLPEGRYERKQTLTNAERYITPELKEKEKLILEAEEK 511
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
E Q +E V + L L+ ++++ D L SF A ++RP +
Sbjct: 512 SVELEYQLFIE-VREQVKSFIHRLQALAKLVSEIDCLQSF--AEVSEKNHFIRPVLSE-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
TG L + Q RHP+VE + G SY+ ND + L+TGPNM GKSTY+R + ++
Sbjct: 567 TGKLSVKQGRHPVVERVMGAQSYVANDCQMDD-DREILLITGPNMSGKSTYMRQVALTAI 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
AQIGCFVP + AT+ V DQIFTR+GAAD G STFM+EM E I T++SL++
Sbjct: 626 CAQIGCFVPAEEATLPVFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVNATKDSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGT+T+DG +A +I + + + TLF+TH+HE+ +L + + + N+ VSA+E+
Sbjct: 686 DEIGRGTATYDGMALAQAIIEYIHENVKAKTLFSTHYHELTVLDQELASLANIHVSAVEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDET 755
+V L+++K G KSYG+H A++A P D++++A ++ E E + TP ++T
Sbjct: 746 NGKVVFLHKIKEGPADKSYGIHVAQLAELPADLIKRASQILAELEAEKEQTTPQVEKT 803
>gi|332523560|ref|ZP_08399812.1| DNA mismatch repair protein MutS [Streptococcus porcinus str.
Jelinkova 176]
gi|332314824|gb|EGJ27809.1| DNA mismatch repair protein MutS [Streptococcus porcinus str.
Jelinkova 176]
Length = 849
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 198/718 (27%), Positives = 344/718 (47%), Gaps = 81/718 (11%)
Query: 59 LVNKSNLSCFSHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAI 118
+V+ + S ++ L I D T G++ +DL T +F++ + D +++L +
Sbjct: 115 VVDSAKPSTANNFLVAIDYDG-------QTYGLSYMDLATGEFFVTSLAD---FTSLNSE 164
Query: 119 IVQKSPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDS 178
I+ KE +L E LND++ E+ L QD N L+ + +
Sbjct: 165 ILNLKTKEVILGFE-LNDDQ-----------------------EKQLKQDSNLLLSYSNE 200
Query: 179 ELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFS----IHSIDYSKYVHMSSAV 234
+++ LL L+ Y+ N+ M + S + + Y+ M+
Sbjct: 201 SYEDSTLLNPQLAPIELRVAGKLLAYV----NQTQMRELSHLQKVSHYEIKDYLQMTYTT 256
Query: 235 MSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNI 294
+SL +L + + + + + SL +LD +T G RLL W+ +PL AI +R +
Sbjct: 257 KASLDLL--ENARTGKKHGSLYWLLDETKTAMGMRLLRTWIDRPLIHQAAIEKRQRIIQT 314
Query: 295 LVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLV 354
++N R +L + +L+G+ D++ L+ R+ K KD ++ + ++Q+P + ++LES+
Sbjct: 315 FLDNFIERADLSD-SLKGVYDIERLSSRVSFGKVNPKDLLQLGQTLAQVPYIKAVLESMT 373
Query: 355 QNVEASNLNTILSSLQSLKMMDR-----------------KDAVMDKMKEYLESTARRLN 397
+ + +L + ++ L+ + R + +++ Y +
Sbjct: 374 -SADLGDLVDQIDAIPELENLIRSAIDPDAQATISEGNIIRTGFDERLDHYRKVMKEGTG 432
Query: 398 LVAD-----------KTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDR 445
+AD +K++ N G+ + +T + D + T++ R+
Sbjct: 433 WIADIEGKERQASGINNLKIDYNKKDGYYFHVTNSNLPLVPDHFFRKATLKNSERYGTAE 492
Query: 446 LATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCA 505
LA Q + E + I V Y L L+ +A DVL S +A
Sbjct: 493 LAKIEGQMLEAREESAQLEYDIFMRVRAQVETYIARLQSLAKAIATVDVLQS--LAQVAE 550
Query: 506 PKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLVTGPNMGG 564
YV P S+V RH +VE GV YIPN + + +VS L+TGPNM G
Sbjct: 551 QNHYVCPRFNQDKEVSIV--DGRHAVVEKVMGVREYIPNSIRL-TDQVSIQLITGPNMSG 607
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTY+R + +++ +AQ+G +V + A + + D IFTR+GAAD G STFM+EM E
Sbjct: 608 KSTYMRQLALTIIMAQMGSYVSAEQANLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQ 667
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
I++ +++SL++ DELGRGT+T+DG +A SI + +H TLFATH+HE+ LS +
Sbjct: 668 AIQRASQDSLILFDELGRGTATYDGMALAQSIIEYIHNHVGAKTLFATHYHELTTLSSQL 727
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+NV VS LE+ + L+++ G KSYG+H AK+AG P +L +A +++E E
Sbjct: 728 QGLQNVHVSTLEKGGEVTFLHKISEGPADKSYGIHVAKIAGLPAGLLSRASHILEELE 785
>gi|87122440|ref|ZP_01078320.1| DNA mismatch repair protein MutS [Marinomonas sp. MED121]
gi|86162233|gb|EAQ63518.1| DNA mismatch repair protein MutS [Marinomonas sp. MED121]
Length = 868
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 272/528 (51%), Gaps = 41/528 (7%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S T ++L +LDRC +P G RLL +W+ QP ++L I R AV L+NN +L +
Sbjct: 287 SGSTSNTLTSVLDRCSSPMGSRLLKRWLHQPSRNLSIINARQDAVQNLINNY--LYDLIK 344
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
L+ + D++ + R+ A +D R+ + +PK+ L + + + LN LS
Sbjct: 345 PELKEVGDIERILARVALGSARPRDLLRLRFALEAIPKIKQHLIA-IDDAHLQALNQQLS 403
Query: 368 SLQSLKM---------------------------MDRKDAVMDKMKEYL-ESTARRLNLV 399
L L +D A+ +YL E R
Sbjct: 404 PLPELTQELAIAIVENPPSVVRDGGIFAKGYDGELDELQALSTNATDYLAELEQREKERT 463
Query: 400 ADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
++K+ N G+ I+ ++ Y T++ RF L T + + +
Sbjct: 464 GINSLKVGFNRVHGYYIEISRLHSDQAPVDYVRRQTLKNAERFITPELKTFEDKALSAKS 523
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM--KP 516
+ ++ + E+++G L S+ L++ DVL +F A YVRP + KP
Sbjct: 524 KALAREKHLYEQLLGTINEELIALQTSSNALSELDVLANF--AERAERHRYVRPVIEDKP 581
Query: 517 MGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
+ + + RHP+VE +IPND+ S E S ++TGPNMGGKSTY+R I +
Sbjct: 582 ----GIEILEGRHPVVESVITEPFIPNDLIM-SPERSLLMITGPNMGGKSTYMRQIALIT 636
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
LA GCFVP ++A +S+VD+IFTR+G++D G STFM+EM ETA ++ T SLV+
Sbjct: 637 LLAHTGCFVPAEAANLSLVDRIFTRMGSSDDLAGGRSTFMVEMTETANILNNATPKSLVL 696
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
+DE+GRGTSTFDG +A S LA+ + LFATH+ E+ LL+ + NV ++A E
Sbjct: 697 MDEVGRGTSTFDGLSLAWSAVDHLANQVKCNVLFATHYFELTLLADELKNAANVHLTATE 756
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
ED++V L++V G+ +SYG+ A++AG P D+++ A+D + E E S
Sbjct: 757 YEDSIVFLHKVHDGAASQSYGLQVAQLAGVPRDVIQAAKDKLAELELS 804
>gi|229915836|ref|YP_002884482.1| DNA mismatch repair protein MutS [Exiguobacterium sp. AT1b]
gi|259511167|sp|C4L191.1|MUTS_EXISA RecName: Full=DNA mismatch repair protein MutS
gi|229467265|gb|ACQ69037.1| DNA mismatch repair protein MutS [Exiguobacterium sp. AT1b]
Length = 842
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 285/540 (52%), Gaps = 60/540 (11%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
+ + S + SLL +LD T G RLL +W++QPL I ER AV LV++ R
Sbjct: 259 RSARSGERKGSLLSLLDETTTAMGGRLLKRWLEQPLYTEQGIRERQDAVENLVDDFMLRD 318
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
L E L+ + D++ L ++G A +D ++ + + ++P + SL+Q V+A L
Sbjct: 319 QLQE-ELKRVYDIERLVAKVGYGTANARDLVQLRDTLERMPSV----RSLLQTVKADRLQ 373
Query: 364 TILSSLQSLKMMDR--------------KDAVM------DKMKEYLESTARRLNLVAD-- 401
I +L S + + K+ M D++ E LE+ A + +A+
Sbjct: 374 QIEQNLDSFETLSEQLRAALVDSPPISTKEGGMIRHGYSDELDELLEAKANGKSWIANLE 433
Query: 402 ---------KTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRF-----QDD 444
K++K+ N G+ +T K N + + RY T+ R+ ++
Sbjct: 434 QQERIATGIKSLKVGYNRVFGYYLEVT-KANAKLLEEGRYERKQTLTNAERYITPELKEK 492
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+ ++ EY+ ++ EEV YT+ L QL+ L++ DVL++ ++
Sbjct: 493 EALILGAEEKSCTLEYDLFV-ALREEV----KTYTKPLQQLARSLSELDVLLALAV--VA 545
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNM 562
+ YVRP T + + + RHP++E L G Y+ ND+ L+TGPNM
Sbjct: 546 EKREYVRPVT----TSHVQIERGRHPVIETVLPRG-EYVANDLTLDDTR-QMLLITGPNM 599
Query: 563 GGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKET 622
GKSTY+R + L QIG FVP ++A + + D+IFTR+GAAD G STFM+EM ET
Sbjct: 600 SGKSTYMRQFALIAILHQIGSFVPAEAAELPLFDRIFTRIGAADDLVSGQSTFMVEMTET 659
Query: 623 ATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR 682
+ + T NSL+++DE+GRGTST+DG +A +I +AS TLF+TH+HE+ +L
Sbjct: 660 RQAVTEATSNSLILLDEIGRGTSTYDGMALAQAIVEYIASSIGAKTLFSTHYHELTVLED 719
Query: 683 VIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
IP+ NV V A+E++ +V L++V PG KSYG+H A++A P+ ++++AR ++ E E
Sbjct: 720 SIPSLENVHVRAIERDGRVVFLHEVHPGRADKSYGIHVAELAELPDSLIDRARTILSELE 779
>gi|15675890|ref|NP_270064.1| DNA mismatch repair protein MutS [Streptococcus pyogenes SF370]
gi|71911618|ref|YP_283168.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS5005]
gi|410681461|ref|YP_006933863.1| DNA mismatch repair protein MutS [Streptococcus pyogenes A20]
gi|18202683|sp|Q99XL8.1|MUTS_STRP1 RecName: Full=DNA mismatch repair protein MutS
gi|13623126|gb|AAK34785.1| putative DNA mismatch repair protein [Streptococcus pyogenes M1
GAS]
gi|71854400|gb|AAZ52423.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS5005]
gi|395454824|dbj|BAM31163.1| DNA mismatch repair protein [Streptococcus pyogenes M1 476]
gi|409694050|gb|AFV38910.1| DNA mismatch repair protein MutS [Streptococcus pyogenes A20]
Length = 851
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 312/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTNLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|421490293|ref|ZP_15937667.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK1138]
gi|400373698|gb|EJP26626.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK1138]
Length = 853
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/576 (29%), Positives = 294/576 (51%), Gaps = 63/576 (10%)
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+H + ++ M + M+SL + + + + + + SL ++D +T G RLL W+++P
Sbjct: 241 VHHYEIKDFLQMDYSTMASLDL--TENARTGKKHGSLYWLMDETKTAMGTRLLRAWIQRP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D + IV+R V + +++ R +L + +L+G+ D++ LA R+ K KD ++
Sbjct: 299 LIDKERIVKRQDVVQVFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKTNPKDLLQLAA 357
Query: 339 GVSQLPKLISILE---------------------SLVQNVEASNLNTILSSLQSLKM--- 374
+S +P++ IL+ +L+Q+ +S+ +++ +K
Sbjct: 358 TLSHVPQIKGILKGIDSPVLEDLIAKLDEIPELAALIQSAISSDAPNVITEGNIIKTGFD 417
Query: 375 --MDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRY 429
+D+ VM ++ E+ R + + + I N G+ + +T + +
Sbjct: 418 ETLDKYRVVMRDGTSWIADIEAKERETSGINNLKIDY-NKKDGYYFHVTNSQLEHVPSHF 476
Query: 430 TILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAG 477
T++ RF + LA +AN +Y+ R I EE +
Sbjct: 477 FRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGK 524
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQG 536
Y + L L+ LA DVL SF A+ + +VRP + S+ +++ RH +VE +
Sbjct: 525 YIKRLQSLAQTLATVDVLQSF--ATVAEKQHFVRPEF--IEQRSIQIDKGRHAVVEKVMS 580
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
+YIPN + V+ L+TGPNM GKSTY+R + + V +AQ+G +V +SA + + D
Sbjct: 581 AQTYIPNSISMDEN-VNVQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFD 639
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E I + TENSL++ DELGRGT+T+DG +A +I
Sbjct: 640 AIFTRIGAADDLVSGQSTFMVEMMEANHAISQATENSLILFDELGRGTATYDGMALAQAI 699
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ + TLFATH+HE+ LS + NV V+ LE++ + L++++ G KSY
Sbjct: 700 IEYIHNRTGAKTLFATHYHELTELSTSLTQLENVHVATLEKDGQVTFLHKIEVGPADKSY 759
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G+H AK+AG P D+L +A ++ E + K G
Sbjct: 760 GIHVAKIAGLPNDLLTRADQILTRLESQANEKPSLG 795
>gi|319940116|ref|ZP_08014470.1| DNA mismatch repair protein mutS [Streptococcus anginosus 1_2_62CV]
gi|319810830|gb|EFW07157.1| DNA mismatch repair protein mutS [Streptococcus anginosus 1_2_62CV]
Length = 853
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 293/575 (50%), Gaps = 61/575 (10%)
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+H + ++ M + M+SL + + + + + + SL ++D +T G RLL W+++P
Sbjct: 241 VHHYEIKDFLQMDYSTMASLDL--TENARTGKKHGSLYWLMDETKTAMGTRLLRAWIQRP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D + IV+R V + +++ R +L + L+G+ D++ LA R+ K KD ++
Sbjct: 299 LIDKERIVKRQDVVQVFLDHFFERSDLSD-TLKGVYDIERLASRVSFGKTNPKDLLQLAA 357
Query: 339 GVSQLPKLISIL--------ESLVQNV----EASNLNTILSSLQSLKMMDRK-------D 379
+S +P++ IL E L+ + E +NL + S + ++ D
Sbjct: 358 TLSHVPQIKGILKGIDSPVLEDLIAKLDEIPELANLIQLAISPDAPNVITEGNIIKTGFD 417
Query: 380 AVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRITMKLNNSIDDRYT 430
+DK + + + + K +K++ N G+ + +T + +
Sbjct: 418 ETLDKYRVVMRDGTSWIADIEAKEREASGINNLKIDYNKKDGYYFHVTNSQLEHVPSHFF 477
Query: 431 ILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAGY 478
T++ RF + LA +AN +Y+ R I EE + Y
Sbjct: 478 RKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGKY 525
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGG 537
+ L L+ LA DVL SF A+ + +VRP + S+ +++ RH +VE + G
Sbjct: 526 IKRLQSLAQTLATVDVLQSF--AAVAEKQHFVRPEF--IEQRSIQIDKGRHAVVEKVMGA 581
Query: 538 VSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQ 597
+YIPN + V+ L+TGPNM GKSTY+R + + V +AQ+G +V +SA + + D
Sbjct: 582 QTYIPNSISMDEN-VNVQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVSAESAQLPIFDA 640
Query: 598 IFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIA 657
IFTR+GAAD G STFM+EM E I + TENSL++ DELGRGT+T+DG +A +I
Sbjct: 641 IFTRIGAADDLVSGQSTFMVEMMEANHAISQATENSLILFDELGRGTATYDGMALAQAII 700
Query: 658 RELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYG 717
+ + TLFATH+HE+ LS + NV V+ LE++ + L++++ G KSYG
Sbjct: 701 EYIHNQTGAKTLFATHYHELTELSTSLTQLENVHVATLEKDGQVTFLHKIEVGPADKSYG 760
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
+H AK+AG P D+L +A ++ E + K+ G
Sbjct: 761 IHVAKIAGLPNDLLTRADQILTRLESQANEKSSFG 795
>gi|392988094|ref|YP_006486687.1| DNA mismatch repair protein MutS [Enterococcus hirae ATCC 9790]
gi|392335514|gb|AFM69796.1| DNA mismatch repair protein MutS [Enterococcus hirae ATCC 9790]
Length = 870
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 287/561 (51%), Gaps = 53/561 (9%)
Query: 221 SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLK 280
+I+Y ++ S ++ Q + + + +LL +LD +T G RLL QW+ +PL
Sbjct: 246 AIEYQPDHYLKMDYYSKFNLELSQSIRTGKKHGTLLWLLDETKTAMGGRLLKQWLDRPLI 305
Query: 281 DLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGV 340
L+ I R V L+N+ R++L AL + D++ LA R+ +D ++ +
Sbjct: 306 QLNQIKSRQEMVASLLNSYFERLDLQS-ALTKVYDLERLAGRVAFGNVNGRDLIQLKTSL 364
Query: 341 SQLPKLISILESLVQNVEASNLNTILSSLQSL----KMMDR----------------KDA 380
Q+P ++ L++ ++ +L +Q + ++D+ KD
Sbjct: 365 EQVP----LIRQLIEGIDQGQWTDLLKEMQPMDDLVHLIDQAIQEDPPLQITEGNIIKDG 420
Query: 381 VMDKM----------KEYL-ESTARRLNLVADKTIKLE-NSPQGFAYRIT-MKLNNSIDD 427
D++ K++L E AR K +K+ N G+ IT L N +
Sbjct: 421 FNDQLDTYRSAMTNGKQWLAELEARERQQTGIKNLKVGFNRVFGYYIEITKANLANVELE 480
Query: 428 RYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIVEEVIGISAGYTQTL 482
+Y T+ RF L TQ +++ EY+ ++ EEV + L
Sbjct: 481 KYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQLFL-AVREEV----KKAIKPL 535
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
L+ ++ DVL SF A+ YVRP M L++ + RHP+VE + G YI
Sbjct: 536 QILAKSISTADVLQSF--ATISERYQYVRPEMVS-DRHQLLIQEGRHPVVEKVLGHQEYI 592
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN V E+ L+TGPNM GKSTY+R + ++V +AQ+GCFVP A + + D+IFTR
Sbjct: 593 PNSVDMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMAQMGCFVPAQKAILPIFDRIFTR 651
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E ++ T NSL++ DELGRGT+T+DG +A +I +
Sbjct: 652 IGASDDLIAGQSTFMVEMMEANQALRHATSNSLILFDELGRGTATYDGMALAQAIIEYIH 711
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
H Q TLF+TH+HE+ +L +P +NV V A+E++ +V L+++ G KSYG+H A
Sbjct: 712 QHVQAKTLFSTHYHELTVLEEELPQLKNVHVGAVEKDGEVVFLHKMMDGPADKSYGIHVA 771
Query: 722 KMAGYPEDMLEQARDLMKEYE 742
K+AG P ++L +A D++ E
Sbjct: 772 KIAGLPSNLLARAADILHTLE 792
>gi|399021417|ref|ZP_10723523.1| DNA mismatch repair protein MutS [Herbaspirillum sp. CF444]
gi|398091870|gb|EJL82296.1| DNA mismatch repair protein MutS [Herbaspirillum sp. CF444]
Length = 905
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 274/537 (51%), Gaps = 50/537 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L +LD CRT G RLL W+ +D RHAA+N L+ T+A L L +
Sbjct: 316 TLFSLLDHCRTAMGSRLLRHWLHHARRDQRIAKARHAAINALMR-TDACSGL-SATLAAV 373
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTIL----SSL 369
PD++ + RI A +D + G+ QL L + + ++ +A L + +
Sbjct: 374 PDIERITTRIALLSARPRDLAGLRAGLQQLGSLRNYVAMCSRDADAPLLLELHEALATPT 433
Query: 370 QSLKMMDRK-------------------DAVMDKMKEY----------LESTARRLNLVA 400
+ + +++R DA +D+++ LE+ R +A
Sbjct: 434 ECIDLLERAIMLEPAAMVRDGGVIARGFDADLDELRGLSENAGQFLIDLETRERARTGIA 493
Query: 401 DKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+ ++ N GF +T + + D Y T++ R+ L + + Q
Sbjct: 494 NLRVEY-NKVHGFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERA 552
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST----CAPKPYVRPCMKP 516
+ ++ + ++++ A + TL ++ LAQ D LV+ + + CAP+ P
Sbjct: 553 LSREKYLYDQLLQDLAPHIVTLQAIAHALAQLDTLVALADHAARNNWCAPQLVTEP---- 608
Query: 517 MGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
++++ Q RHP+VE Q +I ND F S E L+TGPNMGGKST++R + +
Sbjct: 609 ----TILIEQGRHPVVENQI-ERFIANDCAF-SAERKLLLITGPNMGGKSTFMRQVALIT 662
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
LA IG FVP +ATI +D+IFTR+GAAD G STFM+EM E+A ++ TENSLV+
Sbjct: 663 LLAYIGSFVPATNATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNATENSLVL 722
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
+DE+GRGTSTFDG +A +IA+ L + FTLFATH+ E+ L V PT NV +SA+E
Sbjct: 723 MDEVGRGTSTFDGLALAWAIAKHLIDVTRSFTLFATHYFELTQLPDVHPTASNVHLSAVE 782
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+D++V L+ V+ G +SYG+ A++AG P ++ AR + E TP D
Sbjct: 783 HKDSIVFLHAVQSGPASQSYGLQVAQLAGVPTPVIRAARKHLTALETQSVQTTPQFD 839
>gi|385839549|ref|YP_005877179.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp.
cremoris A76]
gi|358750777|gb|AEU41756.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp.
cremoris A76]
Length = 840
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 305/597 (51%), Gaps = 54/597 (9%)
Query: 185 LLPEMCLTTA--THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
LL E+ TA L+ Y++ D + + + ++ M A SSL +
Sbjct: 203 LLIELSGLTALENQAASKLLAYVKETQMRDLSHLQEVEHYEIKDFLQMDFATKSSLELTA 262
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ + + +L +LD +T G R+L W+ +PL AI +R V + +++ R
Sbjct: 263 NKREN--KKHGTLYWLLDETKTAMGTRMLRSWIDRPLVSNSAIQKRMEIVQVFLDHFFER 320
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNL 362
+L E AL+G+ D++ LA R+ KA D ++ +S +P + +ILE L + ++L
Sbjct: 321 SDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAIKNILEVL----DETSL 375
Query: 363 NTILSSLQSLKMMD---------------------RK--DAVMDKMKEYLES-TARRLNL 398
N + S L + + +K + +DK +E LE+ T+ L
Sbjct: 376 NELRSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNVQLDKYREALENGTSWIAKL 435
Query: 399 VADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATAN 450
AD+ T++++ N G+ + IT NS+ + + T++ RF L
Sbjct: 436 EADEKAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNSERFGSQEL---- 491
Query: 451 TQYQAIQREYETHQQSIVEEV-IGISA---GYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
T+ + I E S+ ++ +G+ A Y L L+ +A+ D L S S+
Sbjct: 492 TEIEEIMLEAREKSSSLEYDLFMGLRAETEQYIGRLQALAKTIAEIDCLQSLSV--VAEK 549
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGK 565
+ Y+RP + G+ + + RH +VE + G Y+PND+ + L+TGPNM GK
Sbjct: 550 QGYIRPTLTE-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QTDIQLITGPNMSGK 607
Query: 566 STYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATV 625
STY+R ++V +AQIG FVP +A + + D IFTR+GA+D+ G STFM+EM E
Sbjct: 608 STYMRQFALTVIMAQIGSFVPAKTANLPIFDAIFTRIGASDNLISGESTFMVEMSEANHA 667
Query: 626 IKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP 685
I+K T SL+I DELGRGT+T+DG +A +I + + TLFATH+HE+ L + +
Sbjct: 668 IQKATSRSLIIFDELGRGTATYDGMALAQAIIEYVHEYIGAKTLFATHYHELTDLDKELD 727
Query: 686 TFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
NV V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE+A ++++ E
Sbjct: 728 HLDNVHVATLEQNGNVTFLHKITDGPADKSYGIHVAKIAGLPQTLLERADLILQKLE 784
>gi|50915171|ref|YP_061143.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS10394]
gi|139474579|ref|YP_001129295.1| DNA mismatch repair protein MutS [Streptococcus pyogenes str.
Manfredo]
gi|68052493|sp|Q5X9F3.1|MUTS_STRP6 RecName: Full=DNA mismatch repair protein MutS
gi|166232146|sp|A2RGX2.1|MUTS_STRPG RecName: Full=DNA mismatch repair protein MutS
gi|50904245|gb|AAT87960.1| MutS [Streptococcus pyogenes MGAS10394]
gi|134272826|emb|CAM31104.1| DNA mismatch repair protein MutS [Streptococcus pyogenes str.
Manfredo]
Length = 851
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 311/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 TGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|414075212|ref|YP_007000429.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp.
cremoris UC509.9]
gi|413975132|gb|AFW92596.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp.
cremoris UC509.9]
Length = 840
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 305/597 (51%), Gaps = 54/597 (9%)
Query: 185 LLPEMCLTTA--THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
LL E+ TA L+ Y++ D + + + ++ M A SSL +
Sbjct: 203 LLIELSGLTALENQAASKLLAYVKETQMRDLSHLQEVEHYEIKDFLQMDFATKSSLEL-- 260
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ + + +L +LD +T G R+L W+ +PL AI +R V + +++ R
Sbjct: 261 TENKRENKKHGTLYWLLDETKTAMGTRMLRSWIDRPLVSNSAIQKRMEIVQVFLDHFFER 320
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNL 362
+L E AL+G+ D++ LA R+ KA D ++ +S +P + +ILE L + ++L
Sbjct: 321 SDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPTIKNILEVL----DETSL 375
Query: 363 NTILSSLQSLKMMD---------------------RK--DAVMDKMKEYLES-TARRLNL 398
N + S L + + +K + +DK +E LE+ T+ L
Sbjct: 376 NELRSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNVQLDKYREALENGTSWIAKL 435
Query: 399 VADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATAN 450
AD+ T++++ N G+ + IT NS+ + + T++ RF L
Sbjct: 436 EADEKAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNSERFGSQEL---- 491
Query: 451 TQYQAIQREYETHQQSIVEEV-IGISA---GYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
T+ + I E S+ ++ +G+ A Y L L+ +A+ D L S S+
Sbjct: 492 TEIEEIMLEAREKSSSLEYDLFMGLRAETEQYIGRLQALAKTIAEIDCLQSLSV--IAEK 549
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGK 565
+ Y+RP + G+ + + RH +VE + G Y+PND+ + L+TGPNM GK
Sbjct: 550 QGYIRPTLTE-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QTDIQLITGPNMSGK 607
Query: 566 STYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATV 625
STY+R ++V +AQIG FVP +A + + D IFTR+GA+D+ G STFM+EM E
Sbjct: 608 STYMRQFALTVIMAQIGSFVPAKTANLPIFDAIFTRIGASDNLISGESTFMVEMSEANHA 667
Query: 626 IKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP 685
I+K T SL+I DELGRGT+T+DG +A +I + + TLFATH+HE+ L + +
Sbjct: 668 IQKATSRSLIIFDELGRGTATYDGMALAQAIIEYVHEYIGAKTLFATHYHELTDLDKELD 727
Query: 686 TFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
NV V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE+A ++++ E
Sbjct: 728 HLDNVHVATLEQNGNVTFLHKITDGPADKSYGIHVAKIAGLPQTLLERADLILQKLE 784
>gi|336391647|ref|ZP_08573046.1| DNA mismatch repair protein MutS [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 885
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 265/525 (50%), Gaps = 36/525 (6%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ Q +LL +LD +T G RLL QW+ +PL + I +R V L+++ R +L +
Sbjct: 277 TGQRSGTLLWLLDATKTAMGGRLLKQWLDRPLINATQIKQRQDKVASLMDHFFERSSLQD 336
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-------------- 353
L + D++ LA R+ +D ++ + Q+PKL +IL +
Sbjct: 337 -ELTKVYDLERLAGRVAFGNVNGRDLIQLKTSLLQIPKLKAILTDINDGTFDDVIDHLDP 395
Query: 354 ---VQNVEASNLN----------TILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVA 400
V ++ +N ++ + K+ D +DA+ + + E A+
Sbjct: 396 VSDVADLIDRAINDEPPLSIKDGNVIKPHYNQKLDDYRDAMKNGKQWIAELQAKERAATG 455
Query: 401 DKTIKLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
T+K+ N G+ +T L +DRY T+ RF L T Q
Sbjct: 456 IHTLKIGFNRVFGYYIEVTKANLAALPEDRYERKQTLTNAERFSTPELKEKETLILEAQE 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ + + V L +L+ +A DVL SF++ S YVRP +
Sbjct: 516 KSTALEYDLFTAVREQVKQQIHRLQRLAKGVAALDVLQSFAVVSETYH--YVRPTLTKAH 573
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+V RHP+VE + G YIPNDV + L+TGPNM GKSTY+R + ++V
Sbjct: 574 DLEIVAG--RHPVVEKVLGEQKYIPNDVTMDADNTIL-LITGPNMSGKSTYMRQLALTVI 630
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQIGCF+P AT+ + DQIFTR+GAAD G STFM+EM E+ T + TENSL++
Sbjct: 631 MAQIGCFIPATKATLPIFDQIFTRIGAADDLISGQSTFMVEMMESNTALAHATENSLILF 690
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGT+T+DG +A +I L H TLF+TH+HE+ L +P RNV V A+E+
Sbjct: 691 DEIGRGTATYDGMALAQAIIEYLHDHVHAKTLFSTHYHELTALDTDLPHLRNVHVGAVEE 750
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LV L+++ G+ KSYG+H AK+AG P+ +L +A ++ E
Sbjct: 751 NGTLVFLHKMMAGAADKSYGIHVAKLAGLPDSLLTRATTILAGLE 795
>gi|209560232|ref|YP_002286704.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NZ131]
gi|238058945|sp|B5XJ75.1|MUTS_STRPZ RecName: Full=DNA mismatch repair protein MutS
gi|209541433|gb|ACI62009.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NZ131]
Length = 851
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 186/653 (28%), Positives = 327/653 (50%), Gaps = 53/653 (8%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQESGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE-YSLDTK---TPSGDETNNREEEYFKTVQEGEYQMF 774
P+ +L++A +++ E S T+ PS E++N V++G+ +F
Sbjct: 769 LPKSLLKRADEVLTRLETQSRSTEIISVPSQVESSN-------AVRQGQLSLF 814
>gi|422857399|ref|ZP_16904049.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1057]
gi|327463450|gb|EGF09769.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1057]
Length = 849
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 189/642 (29%), Positives = 311/642 (48%), Gaps = 62/642 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEVEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVY 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + +N+ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARISQRQNVVEVFLNHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRK--- 378
K KD ++ + +P++ +IL+ L + +E + L+ L S +
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAISPDAPHI 405
Query: 379 -----------DAVMDKMKEYL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRIT 418
D +D+ + L E T L + +K++ N G+ + +T
Sbjct: 406 ITEGNIIRTGFDETLDQYRLVLREGTGWIAELEVKERANCGISNLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
+ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I EE + Y Q L L+ LA DVL SF A+ + VRP L + +
Sbjct: 518 IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPVFT--AERRLQIEK 569
Query: 527 CRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +V
Sbjct: 570 GRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYV 628
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+
Sbjct: 629 PAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTA 688
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++ + L+
Sbjct: 689 TYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALENSLEHLENVHVATLEKDGQVTFLH 748
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
+++PG KSYG+H AK+AG PE +LE+A +++ E S DT
Sbjct: 749 KIEPGPADKSYGIHVAKIAGLPEKLLERADNILSHLE-SQDT 789
>gi|365959941|ref|YP_004941508.1| DNA mismatch repair protein MutS [Flavobacterium columnare ATCC
49512]
gi|365736622|gb|AEW85715.1| DNA mismatch repair protein MutS [Flavobacterium columnare ATCC
49512]
Length = 874
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 202/716 (28%), Positives = 346/716 (48%), Gaps = 75/716 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRN 148
+GVA +D+ T +F E + DY ++ ++ +P E L+P + NK + V + N
Sbjct: 143 LGVAFLDVSTGEFLTSE-GNADY---VDKLLQNFNPSEILVPKQ----NKKEFVGLFGEN 194
Query: 149 KVCMTGRK---KNEFSEEDLMQ--DVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
K +++ E L+ N L F EL++ + L + + I
Sbjct: 195 FHAFYLEDWVYKQDYATESLINHFQTNSLKGFGIEELEHGVIASGAILYYLSETQHNKIQ 254
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
++ SIH I YV M + +L + + +LL ++DR
Sbjct: 255 HIT-----------SIHRIAEDAYVWMDRFTIRNLELYHSYNPNAV----TLLDVIDRTL 299
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
+P G RLL +W+ PLKD++ I RH V +N + + + ++ + D++ L ++
Sbjct: 300 SPMGGRLLKRWLALPLKDINKIKGRHEVVGYFKDNQDLLCQVQQ-QIKQISDLERLISKV 358
Query: 324 G------RKKAGLKDCYRVYEGVSQLP--------KLIS-------ILESLVQNVEASNL 362
R+ LKD E V L K+I +L + N +
Sbjct: 359 AAGRVSPRELVYLKDSLDAIEPVKTLALKSTQEAVKVIGDSLHACELLREKISNTLNPDA 418
Query: 363 NTILSSLQSLKM-----MDRKDAVMDKMKEYLESTARRLNLVADKT----IKLE-NSPQG 412
++ ++ + +D + KE+LE+ +R ++KT +K+ N+ G
Sbjct: 419 PVAINKGNAIALGVNEELDELRNISSSGKEFLEAIEKR---ESEKTGIPSLKISFNNVFG 475
Query: 413 FAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVI 472
+ + + + + T+ R+ + L ++ + + + S+ E+++
Sbjct: 476 YYIEVRNTHKDKVPSEWIRKQTLVNAERYITEELKEYESKILGAEEKIHQLEMSLFEQLV 535
Query: 473 GISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIV 532
A Y + + ++++AQ D L SF A YV C + T L + RHP++
Sbjct: 536 TWVATYIKPVQHNANLIAQLDCLTSF--AQQAIENNYV--CPEINDTYVLDIKNGRHPVI 591
Query: 533 E--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
E L GV YI NDVY ++TGPNM GKS +R + V LAQ+G FVP ++
Sbjct: 592 EKQLPIGVPYIANDVYLDRDLQQVVMITGPNMSGKSAILRQTALIVLLAQMGSFVPAEAV 651
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
T+ VVD+IFTRVGA+D+ G STFM+EM ETA+++ + SLV++DE+GRGTST+DG
Sbjct: 652 TMGVVDKIFTRVGASDNISMGESTFMVEMNETASILNNISNRSLVLLDEIGRGTSTYDGV 711
Query: 651 GMACSIARELASH-RQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
+A +IA L + QP TLFATH+HE+ ++ + +N VS E +DN++ + +++
Sbjct: 712 SIAWAIAEFLHENPAQPKTLFATHYHELNEMTETLTRIQNYNVSVKELKDNVLFIRKLEK 771
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS-----LDTKTPSGDETNNREE 760
G S+G+H AKMAG P+ ++++A ++K+ E + L+ KT G+ N EE
Sbjct: 772 GGSAHSFGIHVAKMAGMPQTVIQRAGKILKKLEKNHSSEVLNGKTAQGNLGNEEEE 827
>gi|163790798|ref|ZP_02185224.1| DNA mismatch repair protein [Carnobacterium sp. AT7]
gi|159873978|gb|EDP68056.1| DNA mismatch repair protein [Carnobacterium sp. AT7]
Length = 874
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 274/530 (51%), Gaps = 45/530 (8%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ Q +LL +LD +T G RLL QW+ +PL I R +V L+N+ R +L+E
Sbjct: 274 TGQKKGTLLWLLDETKTAMGGRLLKQWIDRPLIQEKQITMRQNSVESLINHFFERTDLNE 333
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE------------SLVQ 355
AL + D++ LA R+ +D ++ + Q+P+LI I++ L Q
Sbjct: 334 -ALTRVYDLERLAGRVAFGNVNGRDLIQLQTSLRQIPQLIEIIQLMNKGEWDQFIAELDQ 392
Query: 356 NVEASNL-NTILSSLQSLKMMDR---KDAVMDKMKEYLESTARRLNLVAD---------- 401
E +L N + L + D KD +++ Y ++ +A
Sbjct: 393 VPEVVDLINQAIDEDAPLSIKDGGVIKDGFNEQLDVYRDAMRNGKKWIAQLEAEEKAATG 452
Query: 402 -KTIKLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRF-----QDDRLATANTQY 453
K +K+ N G+ IT L N + RY T+ RF ++ + +
Sbjct: 453 IKNLKIGYNRIFGYYIEITKANLANLPEGRYERKQTLANAERFITPALKEKEILILEAEE 512
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPC 513
+++ EY ++ EV Y + L L+ +A DVL SF A+ Y RP
Sbjct: 513 KSMLLEY-----TLFTEVRETIKQYIERLQNLAKTVAAIDVLQSF--ATISEKYHYTRPV 565
Query: 514 MKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSI 572
M + + L + RHP+VE + G +Y+PN V E L+TGPNM GKSTY+R +
Sbjct: 566 MTA-NSQEISLIEGRHPVVEKVLGQQTYVPNSVEM-GKENEILLITGPNMSGKSTYMRQL 623
Query: 573 GVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
++V +AQ+GCFVP D A + + DQIFTR+GAAD G STFM+EM E ++ ++N
Sbjct: 624 ALTVIMAQMGCFVPADQAKMPIFDQIFTRIGAADDLIAGQSTFMVEMMEANEALRYASKN 683
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV 692
SL++ DE+GRGT+T+DG +A +I + TLF+TH+HE+ +L +P NV V
Sbjct: 684 SLILFDEIGRGTATYDGMALAEAIIEHIHEKVHAKTLFSTHYHELTVLDERLPRLTNVHV 743
Query: 693 SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
A+E+E LV L+++ PG KSYG+ AK+AG P+++L +A ++++ E
Sbjct: 744 GAVEEEGELVFLHKMLPGPADKSYGIQVAKLAGLPDELLSRATVILEQLE 793
>gi|350564311|ref|ZP_08933129.1| DNA mismatch repair protein MutS [Thioalkalimicrobium aerophilum
AL3]
gi|349777789|gb|EGZ32151.1| DNA mismatch repair protein MutS [Thioalkalimicrobium aerophilum
AL3]
Length = 875
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 270/522 (51%), Gaps = 43/522 (8%)
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILV-NNTEARMNLHEYAL 310
+ +L +LD C+TP G RLL +W++QPL+ + I++R + V+ LV N +++ H L
Sbjct: 288 HHTLFHLLDHCQTPMGSRLLRRWLRQPLRRREQILQRLSVVDCLVMNQQHSQLQAH---L 344
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQ 370
+ + D++ + R+ A +D ++ ++ LP L L+ Q E L++ ++S +
Sbjct: 345 KPIGDLERILSRVALSSARPRDLSQLGRSLTALPGL---LDWATQWEEVHWLSSQINSFE 401
Query: 371 SL---------------------------KMMDRKDAVMDKMKEYL---ESTARRLNLVA 400
+L +D+ A+ + +YL E R +A
Sbjct: 402 TLADELARAIVEQPPLLLREGGVFKTGYDPELDQLLALKTQAGDYLTDLEKRERERTGLA 461
Query: 401 DKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
I N QG+ ++ + ++ + YT T++ R+ L TQ + +
Sbjct: 462 SLKIGF-NRVQGYYIELSKQYSDQVPLDYTRRQTLKNAERYITAELKNFETQILSADDKA 520
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ +Q++ E+++ L Q LA DVL +F A+ + Y RP +
Sbjct: 521 QAREQALYEQLLTKIQAQLIPLQQTVHALAALDVLANF--ATQALARNYARPTFQ--DQP 576
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L++ Q RHP VE +I ND F +++TGPNMGGKSTY+R + +A
Sbjct: 577 GLLIEQGRHPTVEALSHDPFISNDAEFDDRR-RLHIITGPNMGGKSTYMRQTAIITIMAH 635
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP A +D+IFTR+GA+D G STFM+EM ETA +++ + SL+++DE+
Sbjct: 636 MGCFVPAKQACFGPIDRIFTRIGASDDLTSGRSTFMVEMTETAHILRHASAESLILMDEV 695
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTSTFDG +A +I LA+ + F LFATH+ E+ L+ N+ ++A+E +D+
Sbjct: 696 GRGTSTFDGLALAWAIGDYLATQVKGFCLFATHYFELTNLAEQFDNTVNMHLTAIEHQDS 755
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+QVKPG +SYG+ A +AG P ++ QA+ + E E
Sbjct: 756 IVFLHQVKPGPASQSYGLQVAALAGVPSAVITQAKMRLNELE 797
>gi|289578351|ref|YP_003476978.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
gi|289528064|gb|ADD02416.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
Length = 866
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 200/692 (28%), Positives = 341/692 (49%), Gaps = 67/692 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T Y EI + + I++ +P E + ++L +NK + I N
Sbjct: 137 GICAVDVTTGDLYATEIKNCKDNKKVYDEIIKYAPSEIIANEDFLKNNK--YIKIFKSNN 194
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ +K + EE N+ + L E+ + + + SL +N
Sbjct: 195 CAVNTYEKKLYYEEKSKIIKNQF----------NKKLEELGIKDKPYVVNSLSTLFCYLN 244
Query: 210 NED-----NMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRT 264
++N+ I+ + + Y+ + S + +L +L + S + SLLG+LD+ T
Sbjct: 245 ELQKTALKHINKLLIY--EDNSYMGLDSNAIKNLEILESNKNKSKKG--SLLGVLDKTVT 300
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG 324
P G RLL +W+++PL + + I R AV L N+ + R +L + L + D++ L+ +I
Sbjct: 301 PMGGRLLKKWLEEPLLNKEHIDARLQAVEELFNDYKNRQDLKQ-LLNKIYDLERLSSKIV 359
Query: 325 RKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL-KMMDR------ 377
+ KD + + LP + IL+ + ++ +LQ + +++D+
Sbjct: 360 YQSINPKDFISIKLSLQNLPYIKEILQRFSSRL-LKDIYEKFDTLQDIYELIDKSIKDDP 418
Query: 378 ----------KDA---VMDKM-KEYLESTARRLNLVADKTIK--LENSPQG----FAYRI 417
KD +DK+ K +E NL A++ K ++N G F Y I
Sbjct: 419 STQLKEGNIIKDGYNETVDKLRKASVEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYI 478
Query: 418 TMKLNN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIVEE 470
+ +N + +RY T+ R+ L A + + I+ EY+ + + E
Sbjct: 479 EVTKSNIPQVPERYIRKQTLANAERYVTPELKEIEEAILGAEEKLIELEYQLFNE--IRE 536
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
I + Q + +A DVL+SF A Y +P + + +V+ + RHP
Sbjct: 537 KIELQIVRIQ---DTAKYIATIDVLISF--AEVAETNRYTKPIVD--YSDRIVIKEGRHP 589
Query: 531 IVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
++E S++ ND+ E ++TGPNM GKSTY+R + + V +AQIG FVP A
Sbjct: 590 VIETISDESFVANDIEI-GPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYA 648
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
I +VD+IFTRVGA+D + G STFM+EM E A ++K T SL+I+DE+GRGTST+DG
Sbjct: 649 KIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGM 708
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
+A ++ + + TLFATH+HE+ L + RN VS E+ED+++ L ++ PG
Sbjct: 709 SIAHAVIEYIHEKIKAKTLFATHYHELTKLEGKMKGVRNYNVSVEEREDDIIFLRKIVPG 768
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+ +K+AG P ++E+A++++K E
Sbjct: 769 GADKSYGIQVSKLAGLPYSIVERAKEILKSLE 800
>gi|328957012|ref|YP_004374398.1| DNA mismatch repair protein MutS [Carnobacterium sp. 17-4]
gi|328673336|gb|AEB29382.1| DNA mismatch repair protein MutS [Carnobacterium sp. 17-4]
Length = 874
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 290/573 (50%), Gaps = 49/573 (8%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ Q +LL +LD +T G RLL QW+ +PL I+ R V L+N+ R +L+E
Sbjct: 274 TGQKKGTLLWLLDETKTAMGGRLLKQWIDRPLIQEQQIMMRQNIVESLINHFFERTDLNE 333
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
AL + D++ LA R+ +D ++ + Q+P+LI I++ L+ E L T L
Sbjct: 334 -ALTRVYDLERLAGRVAFGNVNGRDLIQLQTSLLQIPQLIEIIQ-LMNKGEWDQLITELD 391
Query: 368 SL-QSLKMMDR----------------KDAVMDKMKEYLESTARRLNLVADKTIKLENSP 410
+ + ++++D+ KD +++ Y ++ +A + E +
Sbjct: 392 QVPEVVQLIDQAIDENAPLSIKDGGVIKDGFNEQLDIYRDAMRNGKKWIAQLEAE-EKAA 450
Query: 411 QG-----------FAYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAI 456
G F Y I + L N + RY T+ RF L
Sbjct: 451 TGIRNLKIGYNRIFGYYIEITKANLANLPEGRYERKQTLANAERFITPELKEKEVLILEA 510
Query: 457 QREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP 516
+ + + ++ EV Y + L L+ +A DVL SF A+ Y RP M
Sbjct: 511 EEKSMLLEYTLFAEVRETIKDYIERLQNLAKTVAAIDVLQSF--ATISEKYHYTRPLMAA 568
Query: 517 MGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
+ + L + RHP+VE + G +Y+PN V L+TGPNM GKSTY+R + ++
Sbjct: 569 -NSQEISLIEGRHPVVEKVLGQQTYVPNSVEMDQDN-EILLITGPNMSGKSTYMRQLALT 626
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
V +AQ+GCFVP D A + + DQIFTR+GAAD G STFM+EM E ++ ++NSL+
Sbjct: 627 VIMAQMGCFVPADKAIMPIFDQIFTRIGAADDLIAGQSTFMVEMMEANEALRYASKNSLI 686
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + + TLF+TH+HE+ +L + NV V A+
Sbjct: 687 LFDEIGRGTATYDGMALAEAIIEYIHENVHAKTLFSTHYHELTVLDERLTRLTNVHVGAV 746
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE------YSLDTKT 749
E+E LV L+++ PG KSYG+ AK+AG P+D+L +A ++++ E + T+
Sbjct: 747 EEEGELVFLHKMLPGPADKSYGIQVAKLAGLPDDLLSRAAVILEQLEQKEEIVLNRSTQI 806
Query: 750 PSGDETN----NREEEYFKTVQEGEYQMFDFLQ 778
S ET+ + ++E + EG+ +F L+
Sbjct: 807 ASAKETSIPSKSSQKEKVEEKDEGQLSLFGLLE 839
>gi|71904476|ref|YP_281279.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS6180]
gi|90109860|sp|Q48QT6.1|MUTS_STRPM RecName: Full=DNA mismatch repair protein MutS
gi|71803571|gb|AAX72924.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS6180]
Length = 851
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 311/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 TGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|422850573|ref|ZP_16897243.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK150]
gi|325695321|gb|EGD37221.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK150]
Length = 849
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 190/657 (28%), Positives = 319/657 (48%), Gaps = 64/657 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I++R V + +++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARIIQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEA-SNLNTILSSLQSL----- 372
K KD ++ + +P++ +IL+ L++ ++ L ++SS S
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAISPDAPHI 405
Query: 373 ------------KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRI 417
+ +D+ V+ + + LE R + +++ I N G+ + +
Sbjct: 406 ITEGNIIRTGFDETLDQYRLVLREGTGWIAELEVKERANSGISNLKIDY-NKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQ 465
T + + T++ RF + LA +AN +Y+ R
Sbjct: 465 TNSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR------- 517
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
I EE + Y Q L L+ LA DVL SF A+ VRP L +
Sbjct: 518 -IREE----AGKYIQRLQALAQTLATVDVLQSF--AAVAEQLHLVRPVFT--AERCLQIE 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT
Sbjct: 628 VPAQSASLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++ + L
Sbjct: 688 ATYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALENSLEHLENVHVATLEKDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEE 761
++++PG KSYG+H AK+AG PE +LE+A ++ E S DT S T +R ++
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPEKLLERADSILSHLE-SQDTGLGSELPTASRPKQ 803
>gi|302877879|ref|YP_003846443.1| DNA mismatch repair protein MutS [Gallionella capsiferriformans
ES-2]
gi|302580668|gb|ADL54679.1| DNA mismatch repair protein MutS [Gallionella capsiferriformans
ES-2]
Length = 844
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 178/590 (30%), Positives = 299/590 (50%), Gaps = 57/590 (9%)
Query: 200 SLINYLELMNNE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
+L+ Y+ L + D+++ ++S D+ YV M +A +L + +A T LL
Sbjct: 232 ALLGYIRLTQGQTMDHVSSLRVYSADH--YVRMDAATRRNLEITQTLRGEAAPT---LLS 286
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD C T G RLL+ W+ PL+D D + R AV+ L ++A + H L+ D++
Sbjct: 287 LLDTCSTNMGSRLLSHWLHHPLRDRDILRARLDAVDKLTELSDA-VQTH---LKPCVDVE 342
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQ------- 370
+ RI K A +D + + ++ LP+L + L + +++ +N + +LQ
Sbjct: 343 RITARIALKSARPRDLSGLRDTLTALPQLHTTLNA----CDSTRVNALSDALQADVHLTA 398
Query: 371 ----SLK------------MMDRKDAVMDKMKE--------YLESTARRLNLVADKTIKL 406
SL+ + D DA +D+++ L AR T+K+
Sbjct: 399 LLQASLRSDPSSVIREGGVIADGFDAELDELRGIQTNCGDFLLALEAREKARTGISTLKV 458
Query: 407 E-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQ 465
E N GF +++ + ++ D Y T++ R+ L T + + T ++
Sbjct: 459 EYNRVHGFYIEVSVAQSVNVPDDYRRRQTLKNAERYITPELKTFEDKALSANDRALTREK 518
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG--SLV 523
+ ++++ A Y L ++S +++ DVL +F A + P TG ++
Sbjct: 519 FLYDQLLEQLAPYIAQLQRISGAISELDVLATF------AERARTLHFTAPQFTGDSTIQ 572
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
++ RHP+VE Q + PND L+TGPNMGGKSTY+R + + LA +G
Sbjct: 573 ISGGRHPVVEAQVE-RFTPNDTELSDARRML-LITGPNMGGKSTYMRQVAIIALLAHVGS 630
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP A + +DQIFTR+G++D G STFM+EM E A ++ T SLV++DE+GRG
Sbjct: 631 FVPAQQAVLGEIDQIFTRIGSSDDLASGRSTFMVEMTEAANILHNATAQSLVLVDEIGRG 690
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
TSTFDG +A +IA L + Q +TLFATH+ E+ LS NV +SA+E + ++V
Sbjct: 691 TSTFDGLALAYAIACHLLNKNQSYTLFATHYFELTRLSEEFAQLANVHLSAIEHQHSIVF 750
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
L+ V G+ +SYG+ A +AG P +++ A+ ++ E + ++P GD
Sbjct: 751 LHSVNEGAASQSYGLQVAALAGVPAQVIKTAKKQLRVLEQNSAAQSPQGD 800
>gi|190150933|ref|YP_001969458.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307264287|ref|ZP_07545876.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|238692406|sp|B3H2J9.1|MUTS_ACTP7 RecName: Full=DNA mismatch repair protein MutS
gi|189916064|gb|ACE62316.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306870351|gb|EFN02106.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 864
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 206/697 (29%), Positives = 344/697 (49%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+P N EA+ + + LLPAE L IL+ K
Sbjct: 142 AIATLDMTSGRFLITELP------NKEALAAEL---QRLLPAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S V + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTVLLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ L + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QKEQRIELLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D R+ ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTRLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLERAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 MQLAAMALSELDVLTN--LAERAESLNYVRPTFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TENSLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KKTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
>gi|366090361|ref|ZP_09456727.1| DNA mismatch repair protein MutS [Lactobacillus acidipiscis KCTC
13900]
Length = 878
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 179/588 (30%), Positives = 301/588 (51%), Gaps = 60/588 (10%)
Query: 196 HCLRSLINYLELMNNEDNMN-QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS 254
+ + L++YLE+ + Q +IH + ++Y+ + V +L +L + S + + +
Sbjct: 222 NVVSHLVSYLEVTQKRALAHIQKAIH-YEPAQYLKLDHRVKRNLELL--ENSRTHKKSGT 278
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
LL +LD+ +T G RLL QW+ +PL + + I+ER V +L++N R L E L +
Sbjct: 279 LLWLLDKTKTAMGGRLLKQWIDRPLLNKEDILERQNIVQVLLDNYFERSGLQE-ELSQVY 337
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL-- 372
D++ LA R+ +D ++ + +P++ ILE L L+ +LS + +
Sbjct: 338 DLERLAGRVAFGNVNGRDLIQLMTSLHHIPQIKYILEQL----NDGQLDNLLSQIDPVEE 393
Query: 373 -----------------------------KMMDRKDAVMDKMKEYLESTARRLNLVADKT 403
++ + DA+ + K E A+
Sbjct: 394 VADLIETAIVDEPPILVTDGNLIREGYNSQLDEYNDALNNGQKWLAELEAKERQETGIHN 453
Query: 404 IKLENSPQGFAYRITMKLNNS---IDDRYTILDTVRGGVRF-----QDDRLATANTQYQA 455
+K+ + + F Y I + N + RY T+ RF ++ Q +A
Sbjct: 454 LKIGYN-KVFGYYIEVSKGNVGKLAEGRYQRKQTLVNAERFITPELKEKEAMILGAQSKA 512
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
EY+ I E++ Q L +L+ +A+ DVL SF++ S +VRP
Sbjct: 513 ADLEYQLFI-DIREQI----KDRIQRLQKLAAAVAKLDVLQSFAVVSEDGH--FVRPEF- 564
Query: 516 PMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
+ + + Q HP+V+ + G SY+PN++ + +++ L+TGPNM GKSTY+R + +
Sbjct: 565 -VSGHQIDIKQGWHPVVQKVMGKQSYVPNNISM-AQDLTILLITGPNMSGKSTYMRQLAL 622
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
+V +AQ+GC+VP SA + + DQIFTR+GAAD G STFM+EM E +K T NSL
Sbjct: 623 TVIMAQLGCYVPAQSAKMPLFDQIFTRIGAADDLISGESTFMVEMMEANEALKNATPNSL 682
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
++ DE+GRGT+T+DG +A +I + Q TLF+TH+HE+ L +P +N+ V A
Sbjct: 683 LLFDEIGRGTATYDGMALAQAIIEYVHDKVQAKTLFSTHYHELTALESELPQLKNIHVGA 742
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+E+ LV L+Q++ G +SYGVH AK+AG PE +L+ A +++ E
Sbjct: 743 VEKNGELVFLHQMQAGPADRSYGVHVAKLAGLPESLLKNAAQILERLE 790
>gi|166232144|sp|Q1JEH0.1|MUTS_STRPD RecName: Full=DNA mismatch repair protein MutS
gi|94544915|gb|ABF34963.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10270]
Length = 851
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 311/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQESGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|296132996|ref|YP_003640243.1| DNA mismatch repair protein MutS [Thermincola potens JR]
gi|296031574|gb|ADG82342.1| DNA mismatch repair protein MutS [Thermincola potens JR]
Length = 882
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 204/696 (29%), Positives = 334/696 (47%), Gaps = 58/696 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A+ D+ T F + E+ + L I + P ECL+P + L N + IL + K
Sbjct: 138 GLAVADVSTGYFAVTELRGAKALNQLIDEISRLQPVECLIP-DNLVKNMDLTTEILKQVK 196
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELM- 208
+ + FS ++ + R F L+ L ++ C +L+ +L
Sbjct: 197 LSLHSYSSVHFSIKNATSTLLR--HFATGSLEGFGCLE---MSVGISCAGALMAFLAETQ 251
Query: 209 -NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
N+ ++N+ ++ + Y+ + + +L + +S + +LL +LD +T G
Sbjct: 252 KNSLKHINKLIPYTT--TSYMLLDPSTRRNLELTRTIRDSSRK--GTLLWVLDYTQTAMG 307
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL W++QPL D+ AI R V LVNN R +L + + D++ LA RI
Sbjct: 308 GRLLKTWLEQPLTDITAIETRLDTVEELVNNVFMRGDLQKL-FTEVYDLERLAGRIAFGS 366
Query: 328 AGLKDCYRVYEGVSQLPKLISILE---------------------SLVQNVEASNLNTIL 366
A +D + + + LPK+ ILE SL+++ N L
Sbjct: 367 ANARDLIALKKSLQVLPKVKEILEKAYSPGLIQLYRQLDILEDVASLIESAIDDNPPITL 426
Query: 367 SSLQSLKM-----MDR-KDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+K +DR + A D E R K++K+ N G+ +T
Sbjct: 427 RDGGIIKKGYNEEIDRLRKASRDGKTWIAELERREKERTGIKSLKVGYNKVFGYYIEVTR 486
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYETHQQSIVEEVIGI 474
+++ D Y T+ RF L + + Q EYE Q V E I
Sbjct: 487 ANLDAVPDDYIRKQTLANAERFITPDLKEYESLILGAEEKITQLEYELFQA--VREKISN 544
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
S T + Q + ++AQ DV ++F A Y +P + G + + RHP+VE
Sbjct: 545 S---TARIQQAASIVAQLDVYIAF--AEAAIRNNYTKPIIND--DGIIKITDGRHPVVEK 597
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
S++PND Y +++TGPNM GKSTY+R + + V +AQIG +VP A I
Sbjct: 598 FMPEGSFVPNDTYLDCSGYRMDIITGPNMAGKSTYMRQVALIVLMAQIGSYVPASEARIG 657
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+VD+IFTRVGA+D G STFM+EM E A ++ T SL+I+DE+GRGTSTFDG +A
Sbjct: 658 IVDRIFTRVGASDDLATGQSTFMVEMNEVANILNNATAKSLIILDEVGRGTSTFDGLSIA 717
Query: 654 CSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGS 711
++A + + TLFATH+HE+ L+ + P +N ++ E+ D+++ L ++ PG
Sbjct: 718 WAVAEYILDPEKIGAKTLFATHYHELTELADIYPGVQNHNIAVKEKGDDIIFLRKIIPGG 777
Query: 712 CVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
+SYG+ A++AG P ++L +A+++++ E + D
Sbjct: 778 ADRSYGIQVARLAGLPGEVLGKAKEILRTLEVNEDA 813
>gi|326800459|ref|YP_004318278.1| DNA mismatch repair protein mutS [Sphingobacterium sp. 21]
gi|326551223|gb|ADZ79608.1| DNA mismatch repair protein mutS [Sphingobacterium sp. 21]
Length = 871
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 196/696 (28%), Positives = 347/696 (49%), Gaps = 71/696 (10%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP----AEYLNDNKNKIV 142
N +GV+ +D+ T +F + + DY ++ ++ P E +LP +++++ ++
Sbjct: 141 NAIGVSFLDISTGEFLVAQ-GSGDY---IDKLLQGFKPSEIILPKRSYSDFVDQFSDRFY 196
Query: 143 T-ILDRNKVCMTGRKKNEFSEEDLMQ--DVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
T LD ++++E L++ +VN L F + + + A L
Sbjct: 197 TYTLDEWPYS------GDYAKETLLKHFEVNSLKGFGIDRM-------HLAIVAAGVAL- 242
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
+YL + + + +I I+ +Y+ + + +L ++ GS + +L +L
Sbjct: 243 ---HYLNEAEHRNLQHISNIARIEEDRYMWLDRFTVRNLELI---GSANENAI-TLADVL 295
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +P G RLL +WM PLKD I ER V L+ + R L + ++ + D++ L
Sbjct: 296 DSTSSPMGARLLKRWMVMPLKDKRPITERLEVVEYLLKRADLREQLTQ-EIKQIGDLERL 354
Query: 320 AMRIGRKKAGLKDCY---RVYEGVSQLPKLISILESLVQNVEASNLNT-------ILSSL 369
+IG +KA ++ R + + +L +L + ++ NV A LN I L
Sbjct: 355 ISKIGLQKANPRELVQLKRALQAIGRLKELTATADAQALNVIAEQLNPCKIICDRIEKEL 414
Query: 370 QSLK---------MMDRKDAVMDKM-------KEYL-ESTARRLNLVADKTIKLE-NSPQ 411
+S + D DA +D++ K+YL E R + ++K+ N+
Sbjct: 415 KSEPPVLLIKGNVIADGVDAELDRLRKVAFGGKDYLLEIQKRESEITGIPSLKISFNNVF 474
Query: 412 GFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEV 471
G+ +T + + + T+ R+ + L Q + + + + + E+
Sbjct: 475 GYYLEVTNAHKDKVPADWVRKQTLVNAERYITNELKEYEEQILGAEDKIQVIENRLYNEL 534
Query: 472 IGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHP 530
+ Y + + +++++Q DVL++F A+ YV+P + G L+ + RHP
Sbjct: 535 LASLLDYIKPVQLNANLISQLDVLLNF--ATIAHKNHYVKPII---NDGKLIDIKGGRHP 589
Query: 531 IVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
++E L G YI NDV+ S ++TGPNM GKS +R G+ V +AQ+GCFVP
Sbjct: 590 VIEKNLPIGEEYITNDVFLDSDSQQIIIITGPNMAGKSALLRQTGLIVLMAQMGCFVPAK 649
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
A I +VD+IFTRVGA+D+ G STFM+EM ETA+++ ++ SL+++DE+GRGTST+D
Sbjct: 650 HAEIGLVDKIFTRVGASDNLSSGESTFMVEMNETASILNNLSDRSLILLDEIGRGTSTYD 709
Query: 649 GFGMACSIARELASH--RQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQ 706
G +A +IA L +H + TLFATH+HE+ L+ +N VS E + ++ L +
Sbjct: 710 GISIAWAIAEYLHNHPSAKAKTLFATHYHELNELTNTFNRIKNFNVSVKEVNNKIIFLRK 769
Query: 707 VKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ PG S+G+H AKMAG P ++ +A +++K E
Sbjct: 770 LVPGGSEHSFGIHVAKMAGMPAKLVVRANEILKRLE 805
>gi|422879902|ref|ZP_16926367.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1059]
gi|422929748|ref|ZP_16962689.1| DNA mismatch repair protein HexA [Streptococcus sanguinis ATCC
29667]
gi|422932714|ref|ZP_16965645.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK340]
gi|332365313|gb|EGJ43076.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1059]
gi|339614341|gb|EGQ19043.1| DNA mismatch repair protein HexA [Streptococcus sanguinis ATCC
29667]
gi|339618465|gb|EGQ23063.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK340]
Length = 849
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 187/651 (28%), Positives = 315/651 (48%), Gaps = 66/651 (10%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + +++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEA-SNLNTILSSLQSL----- 372
K KD ++ + +P++ +IL+ L++ ++ L ++SS S
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAISPDAPHI 405
Query: 373 ------------KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRI 417
+ +D+ V+ + + LE R + +++ I N G+ + +
Sbjct: 406 ITEGNIIRTGFDETLDQYRLVLREGTGWIAELEVKERANSGISNLKIDY-NKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQ 465
T + + T++ RF + LA +AN +Y+ R
Sbjct: 465 TNSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR------- 517
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
I EE + Y Q L L+ LA DVL SF A+ VRP L +
Sbjct: 518 -IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQLHLVRPVFT--AERRLQIE 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT
Sbjct: 628 VPAQSASLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++ + L
Sbjct: 688 ATYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALEESLEHLENVHVATLEKDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTKTPSG 752
++++PG KSYG+H AK+AG PE +LE+A +++ E LD + P+
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPEKLLERADNILSHLESQDTGLDLELPAA 798
>gi|395243133|ref|ZP_10420120.1| DNA mismatch repair protein mutS [Lactobacillus hominis CRBIP
24.179]
gi|394484363|emb|CCI81128.1| DNA mismatch repair protein mutS [Lactobacillus hominis CRBIP
24.179]
Length = 860
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 309/616 (50%), Gaps = 61/616 (9%)
Query: 169 VNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSI-HSIDYSKY 227
V+ V+ D+ + + ++ ++ + + L++YL L + ++ + S + ++Y
Sbjct: 195 VSNPVKLDEEHAEISYVVQKLSNSAEVKAAKQLVSYL-LSTQKRSLAHLQVAQSYEPTQY 253
Query: 228 VHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVE 287
+ MS V ++L ++ + + + + SL +LD+ T G RLL W+++PL I +
Sbjct: 254 LQMSHVVQTNLELI--KNAKTGKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLSSSEIKK 311
Query: 288 RHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI 347
R V L ++ R N+ + +L+G+ D++ L RI ++ ++ ++ +P
Sbjct: 312 RQDMVQALFDDYFTRENVID-SLKGVYDLERLTGRIAFGSVNAREMLQLAHSLAAVP--- 367
Query: 348 SILESLVQ-NVE-----ASNLNTILSSLQSL------------------------KMMDR 377
IL+SL Q N E A N++ LS +Q L + +DR
Sbjct: 368 VILDSLKQSNNEHLVDFAKNIDP-LSGVQDLIEKTIVDNPPLLTTEGGIIREGVDEQLDR 426
Query: 378 KDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID---DRYTI 431
M K++ +E++ R + + + F Y I + +N DRYT
Sbjct: 427 YRDAMTNGKKWISEMEASERAKTGINNLKVGFNKV---FGYYIEVTNSNKTKVPTDRYTR 483
Query: 432 LDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVI----GISAGYTQTLNQLSD 487
T+ R+ L +++A+ E E+ + ++ Y L +L+
Sbjct: 484 KQTLTNAERYITPELK----EHEALILEAESRSTDLEYDIFVKLREDVKKYIPALQKLAK 539
Query: 488 VLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVY 546
+A DVL +FS S YVRP M V+N RHP+VE + S+IPND+
Sbjct: 540 QIASLDVLTAFSTVSEQ--NNYVRPTMTSDDNEINVVN-GRHPVVEQVMSAGSFIPNDIK 596
Query: 547 FKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAAD 606
G F L+TGPNM GKSTY+R + + +AQ+GCFVP DSAT+ + DQIFTR+GAAD
Sbjct: 597 MTKGTDIF-LITGPNMSGKSTYMRQMALIAIMAQVGCFVPADSATLPIFDQIFTRIGAAD 655
Query: 607 SQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQP 666
G STFM+EM E ++ T+ SLV+ DE+GRGT+T+DG +A +I + L
Sbjct: 656 DLISGQSTFMVEMSEANEALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGA 715
Query: 667 FTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGY 726
TLFATH+HE+ L + + N+ V A E+ L+ L+++ PG +SYG+H A++AG
Sbjct: 716 KTLFATHYHELTDLDQTLEHLENIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGL 775
Query: 727 PEDMLEQARDLMKEYE 742
P +L +A ++ E
Sbjct: 776 PRKVLREANTMLHRLE 791
>gi|386363596|ref|YP_006072927.1| DNA mismatch repair protein MutS [Streptococcus pyogenes Alab49]
gi|350278005|gb|AEQ25373.1| DNA mismatch repair protein MutS [Streptococcus pyogenes Alab49]
Length = 851
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 311/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKKAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEARERQESGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITVQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|392330255|ref|ZP_10274871.1| DNA mismatch repair protein MutS [Streptococcus canis FSL Z3-227]
gi|391420127|gb|EIQ82938.1| DNA mismatch repair protein MutS [Streptococcus canis FSL Z3-227]
Length = 851
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/626 (28%), Positives = 306/626 (48%), Gaps = 39/626 (6%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ K + G +E + L++ +N L+ ++D+ +++ L+ L+ Y+
Sbjct: 169 KAKEVLLGFDLSEVEQAILVKQMNLLLSYEDTIYEDSTLIDNQLTAVELSAAGKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + ++ + Y+ MS A SSL ++ + + + + + SL +LD +T
Sbjct: 229 KTQMRELSHLQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL +AI+ER + + ++ R +L +L+G+ D++ L+ R+
Sbjct: 287 GMRLLRSWIDRPLVSKEAILERQEIIQVFLDAFIERTDLSN-SLKGVYDIERLSSRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR--------- 377
KA KD ++ ++Q+P + +ILE+ + L L +L L+ + R
Sbjct: 346 KANPKDLLQLGHTLAQVPAIKAILEAF-NSAHIDKLVKQLDTLPELEYLIRTAIDPDAPA 404
Query: 378 --------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRI 417
+ +++ Y + +AD +K++ N G+ + +
Sbjct: 405 TISEGSIIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
T + D + T++ R+ LA Q + E + + I +
Sbjct: 465 TNSNLGLVPDHFFRKATLKNSERYGTAELAKIEGQMLEAREESASLEYDIFMRIRTQVET 524
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGG 537
Y L +L+ LA DVL S ++ + Y RP + + RH +VE G
Sbjct: 525 YINRLQKLAKTLATVDVLQSLAVVAET--NHYSRPSFN--DDHVIKIQDGRHAVVEKVMG 580
Query: 538 V-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
V YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D
Sbjct: 581 VQEYIPNSISFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFD 639
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E IK+ + NSL++ DELGRGT+T+DG +A +I
Sbjct: 640 AIFTRIGAADDLISGQSTFMVEMMEANQAIKRASANSLILFDELGRGTATYDGMALAQAI 699
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ T+FATH+HE+ LS + NV V+ LE++ ++ L+++ G KSY
Sbjct: 700 IEYIHDRVGAKTMFATHYHELTELSSKLTQLVNVHVATLEKDGDVTFLHKIAEGPADKSY 759
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
G+H AK+AG PE +L +A D++ E
Sbjct: 760 GIHVAKIAGLPEALLSRADDVLTRLE 785
>gi|256847968|ref|ZP_05553412.1| DNA mismatch repair protein MutS [Lactobacillus coleohominis
101-4-CHN]
gi|256715028|gb|EEU30005.1| DNA mismatch repair protein MutS [Lactobacillus coleohominis
101-4-CHN]
Length = 877
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 267/526 (50%), Gaps = 38/526 (7%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L+ +LD +T G RLL +W+ +PL D I +R V +L++N R NL +
Sbjct: 273 SGKRQGTLVWLLDETKTAMGSRLLKRWLDRPLIDQQKIEKRQDKVQVLLDNYFERQNLQD 332
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
++ + D++ LA R+ +D ++ + Q+PK+ +LE++ V L L
Sbjct: 333 ELIK-VYDLERLAGRVAYGSVNGRDLIQLKTSLQQVPKIKYVLETMDSPV-FDELGNRLD 390
Query: 368 SLQSLK-MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTI 404
L+ + +MD+ KD D++ Y ++ +AD +T
Sbjct: 391 PLEDIADLMDQAINDDPPISVTDGGVIKDHYNDQLDNYRDAMNNGKQWIADLQQKERQTT 450
Query: 405 KLENSPQG----FAYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+ N G F Y I + L+ DRY T+ RF L Q
Sbjct: 451 GINNLKIGYNHVFGYYIEVTKVNLDKLPKDRYERKQTLTNAERFSTPELKEKEALILGAQ 510
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+ + + EV + L L++ L++ DVL SF++ S +VRP +
Sbjct: 511 EKSTALEYDLFVEVREQVKTAIERLQALAEALSELDVLQSFAVVS--EKYHFVRPELN-- 566
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
L++ RHP+VE G Y+PNDV + L+TGPNM GKSTY+R + +S
Sbjct: 567 HDHQLMIKNGRHPVVEKFMGHQEYVPNDVQM-GQDTDILLITGPNMSGKSTYMRQLALSA 625
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+GCF+P + A + + DQIFTR+GAAD G STFM+EM E + T NSL++
Sbjct: 626 VMAQMGCFIPAEKANMPIFDQIFTRIGAADDLVSGESTFMVEMMEANNALLHATRNSLIL 685
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGT+T+DG +A +I + ++ TLF+TH+HE+ L + + +NV V A E
Sbjct: 686 FDEIGRGTATYDGMALAQAIIEYVHNNVHAKTLFSTHYHELTGLDQQLDKLQNVHVGATE 745
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ L+ L++V G KSYG+H AK+AG P +L++A +++ E
Sbjct: 746 ENGELIFLHKVTDGPADKSYGIHVAKLAGMPATLLKRANHILQSLE 791
>gi|306826471|ref|ZP_07459782.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC
10782]
gi|304431330|gb|EFM34328.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC
10782]
Length = 851
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 310/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFNSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 TGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQSLAVVAET--NHYIRPQFN--DNHMITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|409198043|ref|ZP_11226706.1| DNA mismatch repair protein MutS [Marinilabilia salmonicolor JCM
21150]
Length = 873
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 202/710 (28%), Positives = 337/710 (47%), Gaps = 64/710 (9%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
GVA +D+ T +F E P + +++ ++ PKE L + K++ +
Sbjct: 142 AAGVAFLDISTGEFLTAEGP----FDHIQKLVSGFKPKEVLFEKQ----RKSQFAELFGS 193
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
G F+EE +RL++ F+ LK + L T ++++YL+
Sbjct: 194 GYYTF-GLDDWVFTEE---SGRDRLLKHFETKSLKGFGV---ERLKLGTIAAGAVLHYLD 246
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
L + + S+ ID KYV + + +L + S+ + SL I+D TP
Sbjct: 247 LTQHHQIKHISSLSRIDEDKYVWLDRFTIRNLEIF----SSVNEGGRSLTDIIDHSVTPM 302
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG-- 324
G RLL +W+ PLKD+ I +R + V + + +M+L E LR + D++ L ++
Sbjct: 303 GSRLLKRWIALPLKDVQPIKDRQSVVEHFFKDPQLKMDL-ESQLRPVGDLERLVSKVASG 361
Query: 325 ----RKKAGLKDCYRVYEGV----------------SQLPKLISILESLVQNV------E 358
R+ +++ E V QL ++I E + + + +
Sbjct: 362 RITPREMIQMRNALNSIEPVRELCLHADNDVLNHIGGQLNPCVTIKERIEKEIMPDPPNQ 421
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE-NSPQGFAYR 416
+ N I + K +D + K+YL E R ++K+ N+ G+
Sbjct: 422 LNKGNVIREGVS--KELDELRHIAFSGKDYLNELLKRETERTGITSLKISFNNVFGYYIE 479
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+ + + D + T+ R+ + L + + + + + A
Sbjct: 480 VRNTHKDKVPDDWIRKQTLVNAERYITEELKEYEAKILGAEERMLVLETELFNALTVALA 539
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE--L 534
+ + S++LA+ D LV F AS A YVRP + SL + RHP++E L
Sbjct: 540 DFIPAIQLNSNLLARIDCLVGF--ASLAAQNNYVRPVITE--EDSLDIKAGRHPVIEKQL 595
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G Y+PNDVY + + ++TGPNM GKS +R + V +AQIG FVP +SATI V
Sbjct: 596 PAGEEYVPNDVYLDNDKQQIIIITGPNMAGKSALLRQTALIVLMAQIGSFVPAESATIGV 655
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
VD+IFTRVGA+D+ G STFM+EM E ++++ T SLV+ DELGRGTST+DG +A
Sbjct: 656 VDKIFTRVGASDNISLGESTFMVEMNEASSILNNLTPRSLVLFDELGRGTSTYDGISIAW 715
Query: 655 SIARELA--SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSC 712
SI + + + TLFATH+HE+ + + P +N VS E ++ ++ L ++ PG
Sbjct: 716 SIVEYIHENTRARAKTLFATHYHELNEMEKSFPRCKNFNVSVKEVDNKVIFLRKLVPGGS 775
Query: 713 VKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS---LDTKTPSGDETNNRE 759
S+G+H A+MAG P ++++A +++ E E + P GD +RE
Sbjct: 776 EHSFGIHVARMAGMPPSVVKRANEILGELETNNRQGGISKPVGDLAQHRE 825
>gi|212543423|ref|XP_002151866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
gi|210066773|gb|EEA20866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
Length = 1197
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 199/705 (28%), Positives = 333/705 (47%), Gaps = 63/705 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A VD T +FY+ E DD + E + Q P+E LL ++ K + IL N
Sbjct: 455 GIAFVDTATGQFYLSEFKDDADMTKFETFVAQTRPQELLLEKSAVS---QKAMRILKNNT 511
Query: 150 VCMTG----RKKNEFSEEDL-MQDVNRLVRFDDSELKNARLLPEMCLTT-----ATHCLR 199
T + EF E D+ +++++ F + N P++ A
Sbjct: 512 GPTTLWNHLKPGKEFWEADIAVRELDASDYFVSPDSDNINAWPQVLREAREKENAMSAFG 571
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ----QGSTSAQTYDSL 255
+L+ YL ++ + ++ SI + + + +++++ L S + +L
Sbjct: 572 ALVQYLRVLKLDRDL--ISIGNFTWYDPIRKATSLVLDGQTLINLEIFANSFDGGSEGTL 629
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+L+RC TP G R+ QW+ PL D+D I R AV+ L ++ R L +PD
Sbjct: 630 FQLLNRCITPFGKRMFKQWVCHPLVDIDKINARFDAVDALNADSTIRDQFSS-QLTKMPD 688
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLP-----------------KLISILESLVQNVE 358
++ L RI +D RV EG Q+ KL+S + LV +E
Sbjct: 689 LERLISRIHAGACKGQDFLRVLEGFEQIEYTMGLLKDLGSGEGLIGKLVSSMPDLVSPLE 748
Query: 359 ---------ASNLNTILSSLQSLKM-MDRKDAVMDKMKEYLESTAR--RLNLVADKTIKL 406
+ N IL Q ++ D A ++++ LE+ + R +L +
Sbjct: 749 YWKTAFDRLKAKENGILVPEQGIEEDFDASQATIEQIHRDLENLLKQARRDLGSTAICYR 808
Query: 407 ENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
+N + + + +K+ N I + + + R+ L + Q Q ETH Q
Sbjct: 809 DNGKEIYQLEVPIKVKN-IPKTWDQMSATKQVKRYYFPELRALIRKLQEAQ---ETHSQ- 863
Query: 467 IVEEVIG-----ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
IV+EV G Y L + ++AQ D L+S + AS+ +P RP
Sbjct: 864 IVKEVAGRFYARFDEDYETWLKSIR-IVAQLDCLISLAKASSSLGQPSCRPEFVDSERSV 922
Query: 522 LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 581
L + RHP + LQ +IPNDV + S NL+TG N GKST +R V+V +AQ+
Sbjct: 923 LEFEELRHPCM-LQNVTDFIPNDVQLGGDKASINLLTGANAAGKSTILRMTCVAVIMAQV 981
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
GC++PC SA ++ VD+I +R+GA D+ + STF +E+ ET ++ + T SLVI+DELG
Sbjct: 982 GCYIPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPKSLVILDELG 1041
Query: 642 RGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF--RNVQVSALEQED 699
RGTS++DG +A ++ +A+H FATH+H +A P + +++ ++E
Sbjct: 1042 RGTSSYDGVAVAQAVLHHIATHVGSLGFFATHYHSLAAEFENHPEISPKRMRIHVDDEER 1101
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
+ LY+++ G S+G+HCA M G P ++E A + K++E++
Sbjct: 1102 RVTFLYKLEDGVAEGSFGMHCASMCGIPNKVIENAENAAKQWEHT 1146
>gi|195094079|ref|XP_001997776.1| GH11754 [Drosophila grimshawi]
gi|193906122|gb|EDW04989.1| GH11754 [Drosophila grimshawi]
Length = 367
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 162/226 (71%)
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE 533
++ GY L L++ LAQ D LVSF+ A+ CAP PYVRP M P G G L+L RHP +E
Sbjct: 142 VAVGYAAPLTSLNNELAQLDCLVSFATAARCAPTPYVRPKMLPEGAGQLLLEDVRHPCLE 201
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
LQ VS+I N V F+ + + ++TGPNMGGKSTYIRS+G +V +A +G FVPC ATIS
Sbjct: 202 LQEHVSFIANSVAFEKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSVATIS 261
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDELGRGTST++G G+A
Sbjct: 262 MVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIA 321
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
SIA LA + FTLFATHFHEI L+ +PT +N ++A+ +D
Sbjct: 322 WSIAEHLAKETKCFTLFATHFHEITKLAETLPTVKNCHMAAVADKD 367
>gi|56808552|ref|ZP_00366286.1| COG0249: Mismatch repair ATPase (MutS family) [Streptococcus
pyogenes M49 591]
Length = 794
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 186/653 (28%), Positives = 327/653 (50%), Gaps = 53/653 (8%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 121 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 180
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 181 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 238
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 239 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 297
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 298 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 356
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 357 NGFDERLDHYRKVMREGTGWIADIEAKERQESGINNLKIDYNKKDGYYFHVTNSNLSLVP 416
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 417 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 476
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 477 KTLATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 532
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 533 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 591
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 592 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 651
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 652 AKTIFATHYHELTDLSTKLISLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 711
Query: 726 YPEDMLEQARDLMKEYE-YSLDTK---TPSGDETNNREEEYFKTVQEGEYQMF 774
P+ +L++A +++ E S T+ PS E++N V++G+ +F
Sbjct: 712 LPKSLLKRADEVLTRLETQSRSTEIISVPSQVESSN-------AVRQGQLSLF 757
>gi|383480785|ref|YP_005389679.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS15252]
gi|383494765|ref|YP_005412441.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS1882]
gi|378928775|gb|AFC66981.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS15252]
gi|378930492|gb|AFC68909.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS1882]
Length = 851
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 310/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFNSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 TGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|377831895|ref|ZP_09814860.1| DNA mismatch repair protein MutS [Lactobacillus mucosae LM1]
gi|377554273|gb|EHT15987.1| DNA mismatch repair protein MutS [Lactobacillus mucosae LM1]
Length = 882
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/538 (31%), Positives = 271/538 (50%), Gaps = 62/538 (11%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L+ +LD +T G RLL +W+ +PL D + I +R V +L++N R NL +
Sbjct: 270 SGKRQGTLVWLLDETKTAMGSRLLKRWLDRPLIDAEQIEQRQDKVQVLLDNYFERSNLQQ 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
L + D++ LA R+ +D ++ + Q+PK+ ILE+L +A + + +
Sbjct: 330 -ELTQVYDLERLAGRVAYGSVNGRDLIQLKTSLLQVPKIKYILETL----DAPVFDDLAA 384
Query: 368 SLQSLK----MMDR----------------KDAVMDKMKEYLESTARRLNLVADKTIKLE 407
L L +++R K D++ +Y ++ +A K E
Sbjct: 385 KLDPLSDIADLIERSIAEEPPISVTDGGVIKTGYNDQLDQYRDAMNNGKQWIAQLQAK-E 443
Query: 408 NSPQG-----------FAYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLATA---- 449
G F Y I + L+ +RY T+ RF L
Sbjct: 444 REATGISNLKIGYNHVFGYYIEVTKANLSKLPTERYERKQTLTNAERFSTPELKAKEALI 503
Query: 450 -NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQL---SDVLAQFDVLVSFSIASTCA 505
Q ++ EY+ +G+ Q +N+L + L++ DVL SF++ S
Sbjct: 504 LGAQEKSTALEYDL--------FVGVRETVKQAINRLQSLAKALSELDVLQSFAVVSE-- 553
Query: 506 PKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
+VRP M L + RHP+VE + G Y+PNDV + S L+TGPNM G
Sbjct: 554 DYHFVRPQMNQ--AHRLEIKNGRHPVVEKVMGYQKYVPNDVLMDP-QTSILLITGPNMSG 610
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTY+R + ++ +AQ+GCFVP D A + + DQIFTR+GAAD G STFM+EM E
Sbjct: 611 KSTYMRQLALTAVMAQMGCFVPADQANLPIFDQIFTRIGAADDLIAGESTFMVEMMEANN 670
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
++ T NSL++ DE+GRGT+T+DG +A +I + H TLF+TH+HE+ L + +
Sbjct: 671 ALQHATANSLILFDEIGRGTATYDGMALAQAIIEYVHDHVGAKTLFSTHYHELTDLEQTL 730
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
NV V A E+ LV L++++ G KSYG+H AK+AG P D+L++A ++ + E
Sbjct: 731 KHLHNVHVGATEENGELVFLHKIEDGPADKSYGIHVAKLAGMPADLLKRAAQILNQLE 788
>gi|334143596|ref|YP_004536752.1| DNA mismatch repair protein mutS [Thioalkalimicrobium cyclicum
ALM1]
gi|333964507|gb|AEG31273.1| DNA mismatch repair protein mutS [Thioalkalimicrobium cyclicum
ALM1]
Length = 862
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/517 (30%), Positives = 273/517 (52%), Gaps = 33/517 (6%)
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
+ +L ++D+C+T G RLL +W++QPL++ I +R V+ L+++ E + L E+ L+
Sbjct: 288 HHTLFHLIDQCQTAMGSRLLRRWLRQPLRNRTHIRQRLNVVDSLLHSQEYPI-LQEH-LK 345
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISI------LESLVQNVE-----AS 360
+ D++ + R+ A +D ++ G++ LP L+S L++L ++
Sbjct: 346 PIGDLERILSRVALGSARPRDLSQLSRGLNALPGLLSWAKDWGALDALTAQIDPFHELGD 405
Query: 361 NLNTILSSLQSLKMMDR---KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
LN L + L + D K +++ E L + + + D ++K+
Sbjct: 406 ELNRALVANPPLLLRDGGVFKSGYDEQLDELLALKTQAGDFLTDLETRERERTGLNSLKI 465
Query: 407 E-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQ 465
N QG+ ++ + ++ + YT T++ R+ L TQ + + +
Sbjct: 466 GFNRVQGYYIELSKQYSDQVPLDYTRRQTLKNAERYITAELKNFETQILSADDRAQAREN 525
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
+ E+++G L Q ++ LA DVL +F A+ + Y +P + LV+
Sbjct: 526 WLYEQLLGKIQAQLMVLQQTANALATLDVLANF--AAQAMARNYAKPQFRE--EPGLVIE 581
Query: 526 QCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
Q RHP VE +I ND F + +++TGPNMGGKSTY+R + LA IGCFV
Sbjct: 582 QGRHPTVEALSHEPFIANDADFNE-QRRLHIITGPNMGGKSTYMRQTAIITILAHIGCFV 640
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P A +D+IFTR+GA+D G STFM+EM ETA +++ + SL+++DE+GRGTS
Sbjct: 641 PAKQACFGPIDRIFTRIGASDDLTSGRSTFMVEMTETAHILRHASNQSLILMDEVGRGTS 700
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
TFDG +A +I LA+ + + LFATH+ E+ L+ N ++A+E +D+++ L+
Sbjct: 701 TFDGLALAWAIGEYLATEVKGYCLFATHYFELTSLAEQFDNTVNSHLTAVEHQDSIIFLH 760
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
QVKPG +SYG+ A +AG P ++ QA+ + E E
Sbjct: 761 QVKPGPASQSYGLQVAALAGVPAVVITQAKARLNELE 797
>gi|281492893|ref|YP_003354873.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp. lactis
KF147]
gi|281376545|gb|ADA66031.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp. lactis
KF147]
Length = 840
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 292/549 (53%), Gaps = 44/549 (8%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A SSL + + + + +L +LD +T G R+L W+ +PL AI
Sbjct: 247 FLQMDFATKSSLELTANKREN--KKHGTLYWLLDETKTAMGTRMLRSWIDRPLVSNSAIQ 304
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V I +++ R +L E AL+G+ D++ LA R+ KA D ++ +S +P +
Sbjct: 305 KRMEIVQIFLDHFFERSDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAI 363
Query: 347 ISIL----ESLVQNV--------EASNL-NTILSSLQSLKMMDRK------DAVMDKMKE 387
+IL E+ ++ + E S L N+ +S S + + +A +DK +E
Sbjct: 364 KNILGMLNEAPLEELKSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNAQLDKYRE 423
Query: 388 YLES-TARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
LE+ T+ L AD+ T++++ N G+ + IT NS+ + + T++
Sbjct: 424 ALENGTSWIAKLEADEKAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNS 483
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEV-IGI---SAGYTQTLNQLSDVLAQFDV 494
RF L T+ + I E S+ ++ +G+ + Y L L+ +A+ D
Sbjct: 484 ERFGSQEL----TEIEEIMLEAREKSSSLEYDLFMGLRTETEQYIGRLQALAKTIAEIDC 539
Query: 495 LVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVS 553
L S S+ + Y+RP + G+ + + RH +VE + G Y+PND+ +
Sbjct: 540 LQSLSV--VAEKQGYIRPTLTD-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QTD 595
Query: 554 FNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIS 613
L+TGPNM GKSTY+R ++V +AQIG FVP ++A + + D IFTR+GA+D+ G S
Sbjct: 596 IQLITGPNMSGKSTYMRQFALTVIMAQIGSFVPAETANLPIFDAIFTRIGASDNLISGES 655
Query: 614 TFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATH 673
TFM+EM E I+K + SL+I DELGRGT+T+DG +A +I + H TLFATH
Sbjct: 656 TFMVEMSEANHAIQKASSRSLIIFDELGRGTATYDGMALAQAIIEYVHDHIGAKTLFATH 715
Query: 674 FHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQ 733
+HE+ L + NV V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE+
Sbjct: 716 YHELTDLDEALDHLDNVHVATLEQNGNVTFLHKITEGPADKSYGIHVAKIAGLPQPLLER 775
Query: 734 ARDLMKEYE 742
A ++++ E
Sbjct: 776 ADLILQKLE 784
>gi|421892385|ref|ZP_16323055.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NS88.2]
gi|379981856|emb|CCG26777.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NS88.2]
Length = 851
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 310/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFNSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 TGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQSLAVIAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>gi|407716118|ref|YP_006837398.1| Mismatch repair ATPase [Cycloclasticus sp. P1]
gi|407256454|gb|AFT66895.1| Mismatch repair ATPase [Cycloclasticus sp. P1]
Length = 856
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 196/697 (28%), Positives = 341/697 (48%), Gaps = 68/697 (9%)
Query: 71 ILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP 130
+LC + E K G+A +DL + +F + EI D+ ++L+ + + +P E L+
Sbjct: 133 LLCAVFEQK-------KQYGLATLDLASGRFLLQEI---DHEASLKTELARINPAEILIS 182
Query: 131 AEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC 190
+ + + T+L +K + F ++ + +N+ +F +LK
Sbjct: 183 ED------SSLSTLLATHK-GLNLMADWHFDQQTATRLLNK--QFGTQDLKGFGC---HA 230
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQ 250
+T A +L+ YL+ + + SI I + ++ + +A L + S
Sbjct: 231 MTLALSAAGALLQYLKDTHQSSLPHLQSIKVIQQTDFITLDAATRQHLEL---DYHPSGN 287
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
+ +L G+L+RC+T G RLL +W+ PL+D I R+ AV L T+ ++ + +L
Sbjct: 288 MHFTLFGLLNRCKTTMGTRLLRRWIHLPLRDQSIIKHRYLAVEQL--QTQTIIDQLQASL 345
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSL- 369
+ D++ + RI A +D + + + +P + ++ + N++A L T+L
Sbjct: 346 KQTGDIERITSRIALLTARPRDLVVLRDTLKAVPAI----QNTLANLDAPRLKTLLDQTG 401
Query: 370 --QSL-KMMDRK-------------------DAVMDKMKE--------YLESTARRLNLV 399
Q+L +++D+ D +D++K LE +
Sbjct: 402 NHQTLAELLDKAIVDNPPVLIRDGGVIANGYDEKLDELKNISANADQFLLEIELKEREFS 461
Query: 400 ADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
T+KL N G+ + N + D + T++ R+ L T + +
Sbjct: 462 QISTLKLNYNRVHGYYIEVPRSQANKVPDYFIRKQTLKNVERYITPELKTFEDKVLHAKE 521
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ ++++ + ++ A L ++ LA+ D+L +F A A + +P +
Sbjct: 522 QALSYEKELYNALLLSMAPQLSALQSCAEALAEIDLLTNF--AERAATLNFNQPSLS--N 577
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
T + + Q RHPIVE +I ND+ S + ++TGPNMGGKSTY+R I + +
Sbjct: 578 TAGISIKQGRHPIVESVIDTPFIANDIELNSSQKML-IITGPNMGGKSTYMRQIALLTLM 636
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
A IGC++P A +DQIFTR+GA D G STFM+EM ETA ++ ++ SLV++D
Sbjct: 637 AHIGCYIPASEAHFGPIDQIFTRIGATDDLASGRSTFMVEMSETANILHNASDKSLVLMD 696
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
E+GRGTSTFDG +A + A LA+ QPFTLFATH+ E+ L PT +NV + A+E
Sbjct: 697 EIGRGTSTFDGLSLAWACADYLANKTQPFTLFATHYFEMTSLPESAPTAKNVHLDAIEHG 756
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQAR 735
D++V L+ VK G+ +SYG+ A +AG P+ ++ AR
Sbjct: 757 DHIVFLHAVKDGAANQSYGLQVAALAGVPKTVISNAR 793
>gi|374674289|dbj|BAL52180.1| mismatch repair protein MutS [Lactococcus lactis subsp. lactis
IO-1]
Length = 840
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 292/549 (53%), Gaps = 44/549 (8%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A SSL + + + + +L +LD +T G R+L W+ +PL AI
Sbjct: 247 FLQMDFATKSSLELTANKREN--KKHGTLYWLLDETKTAMGTRMLRSWIDRPLVSNSAIQ 304
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V I +++ R +L E AL+G+ D++ LA R+ KA D ++ +S +P +
Sbjct: 305 KRMEIVQIFLDHFFERSDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAI 363
Query: 347 ISIL----ESLVQNV--------EASNL-NTILSSLQSLKMMDRK------DAVMDKMKE 387
+IL E+ ++ + E S L N+ +S S + + +A +DK +E
Sbjct: 364 KNILGMLNEAPLEELKSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNAQLDKYRE 423
Query: 388 YLES-TARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
LE+ T+ L AD+ T++++ N G+ + IT NS+ + + T++
Sbjct: 424 ALENGTSWIAKLEADEKAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNS 483
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEV-IGI---SAGYTQTLNQLSDVLAQFDV 494
RF L T+ + I E S+ ++ +G+ + Y L L+ +A+ D
Sbjct: 484 ERFGSQEL----TEIEEIMLEAREKSSSLEYDLFMGLRTETEQYIGRLQALAKTIAEIDC 539
Query: 495 LVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVS 553
L S S+ + Y+RP + G+ + + RH +VE + G Y+PND+ +
Sbjct: 540 LQSLSV--VAEKQGYIRPTLTD-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QTD 595
Query: 554 FNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIS 613
L+TGPNM GKSTY+R ++V +AQIG FVP ++A + + D IFTR+GA+D+ G S
Sbjct: 596 IQLITGPNMSGKSTYMRQFALTVIMAQIGSFVPAETANLPIFDAIFTRIGASDNLISGES 655
Query: 614 TFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATH 673
TFM+EM E I+K + SL+I DELGRGT+T+DG +A +I + H TLFATH
Sbjct: 656 TFMVEMSEANHAIQKASSRSLIIFDELGRGTATYDGMALAQAIIEYVHDHIGAKTLFATH 715
Query: 674 FHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQ 733
+HE+ L + NV V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE+
Sbjct: 716 YHELTDLDEALDHLDNVHVATLEQNGNVTFLHKITEGPADKSYGIHVAKIAGLPQPLLER 775
Query: 734 ARDLMKEYE 742
A ++++ E
Sbjct: 776 ADLILQKLE 784
>gi|116513155|ref|YP_812062.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp.
cremoris SK11]
gi|123320077|sp|Q02VS3.1|MUTS_LACLS RecName: Full=DNA mismatch repair protein MutS
gi|116108809|gb|ABJ73949.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp.
cremoris SK11]
Length = 840
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 305/597 (51%), Gaps = 54/597 (9%)
Query: 185 LLPEMCLTTA--THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
LL E+ TA L+ Y++ D + + + ++ + A SSL +
Sbjct: 203 LLIELSGLTALENQAASKLLAYVKETQMRDLSHLQEVEHYEIKDFLQLDFATKSSLELTA 262
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ + + +L +LD +T G R+L W+ +PL AI +R V + +++ R
Sbjct: 263 NKREN--KKHGTLYWLLDETKTAMGTRMLRSWIDRPLVSNSAIQKRMEIVQVFLDHFFER 320
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNL 362
+L E AL+G+ D++ LA R+ KA D ++ +S +P + +ILE L + ++L
Sbjct: 321 SDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAIKNILEVL----DETSL 375
Query: 363 NTILSSLQSLKMMD---------------------RK--DAVMDKMKEYLES-TARRLNL 398
N + S L + + +K + +DK +E LE+ T+ L
Sbjct: 376 NELRSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNVQLDKYREALENGTSWIAKL 435
Query: 399 VADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATAN 450
AD+ T++++ N G+ + IT NS+ + + T++ RF L
Sbjct: 436 EADEKAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNSERFGSQEL---- 491
Query: 451 TQYQAIQREYETHQQSIVEEV-IGISA---GYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
T+ + I E S+ ++ +G+ A Y L L+ +A+ D L S S+
Sbjct: 492 TEIEEIMLEAREKSSSLEYDLFMGLRAETEQYIGRLQALAKTIAEIDCLQSLSV--VAEK 549
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGK 565
+ Y+RP + G+ + + RH +VE + G Y+PND+ + L+TGPNM GK
Sbjct: 550 QGYIRPTLTE-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QTDIQLITGPNMSGK 607
Query: 566 STYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATV 625
STY+R ++V +AQIG FVP +A + + D IFTR+GA+D+ G STFM+EM E
Sbjct: 608 STYMRQFALTVIMAQIGSFVPAKTANLPIFDAIFTRIGASDNLISGESTFMVEMSEANHA 667
Query: 626 IKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP 685
I+K T SL+I DELGRGT+T+DG +A +I + + TLFATH+HE+ L + +
Sbjct: 668 IQKATSRSLIIFDELGRGTATYDGMALAQAIIEYVHEYIGAKTLFATHYHELTDLDKELD 727
Query: 686 TFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
NV V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE+A ++++ E
Sbjct: 728 HLDNVHVATLEQNGNVTFLHKITDGPADKSYGIHVAKIAGLPQTLLERADLILQKLE 784
>gi|323350709|ref|ZP_08086370.1| DNA mismatch repair protein HexA [Streptococcus sanguinis VMC66]
gi|322123129|gb|EFX94820.1| DNA mismatch repair protein HexA [Streptococcus sanguinis VMC66]
Length = 849
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 188/643 (29%), Positives = 314/643 (48%), Gaps = 64/643 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + +++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEA-SNLNTILSSLQSL----- 372
K KD ++ + +P++ +IL+ L++ ++ S L ++SS S
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPISELAGLISSAISPDAPHI 405
Query: 373 ------------KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRI 417
+ +D+ V+ + + LE R + +++ I N G+ + +
Sbjct: 406 ITEGNIIQTGFDETLDQYRLVLREGTGWIAELEVKERANSGISNLKIDY-NKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQ 465
T + + T++ RF + LA +AN +Y+ R
Sbjct: 465 TNSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR------- 517
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
I EE + Y Q L L+ LA DVL SF A+ VRP L +
Sbjct: 518 -IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQLHLVRPVFT--AERCLQIE 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT
Sbjct: 628 VPAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++ + L
Sbjct: 688 ATYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALENSLEHLENVHVATLEKDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
++++PG KSYG+H AK+AG PE +LE+A +++ E S DT
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPEKLLERADNILSHLE-SQDT 789
>gi|227484985|ref|ZP_03915301.1| possible DNA mismatch repair protein MutS [Anaerococcus
lactolyticus ATCC 51172]
gi|227236982|gb|EEI86997.1| possible DNA mismatch repair protein MutS [Anaerococcus
lactolyticus ATCC 51172]
Length = 869
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 296/567 (52%), Gaps = 56/567 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D++N I I+ +++ + S +L L + ST+ + ++L+ ILD+ T G R++
Sbjct: 260 DHINNIEILKIN--EFMEIESNTRKNLE-LTRNLSTNNKE-NTLISILDQADTVMGSRMI 315
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
W+++PL D D I R V+ ++ N+ L + D++ L +I K+A +
Sbjct: 316 HDWLERPLIDRDKINRRLDLVDGFYEDSILSRNVSNL-LDSVYDLERLLAKISYKRANAR 374
Query: 332 DCYRVYEGVSQLPKLISIL----ESLVQN-------------------VEASNLNT---- 364
D + + ++PKL +L +L++N V+ +N
Sbjct: 375 DLISLKNSIKEMPKLKHVLADSTNNLIKNLGLNLPDVEDIYELINKSIVDEPPINITEGG 434
Query: 365 ILSS-----LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRITM 419
I+ S L +LK M D DK+ EY ES R L + + + + N G++ +T
Sbjct: 435 IIKSQYDKDLDNLKEM--ADTAEDKLIEY-ESKQRELTGIKNLKV-IFNKNNGYSIEVTK 490
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGI 474
+ ID Y T++ R+ + L N + + EYE + IVE ++
Sbjct: 491 SNIDKIDQSYIRKQTLKNQERYTTEELENISSLILNGKEKINLLEYELFNK-IVENIL-- 547
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVEL 534
T L LS ++A D L SF A Y +P + S++ + RHP++E+
Sbjct: 548 --NSTLRLQSLSKMIANIDSLNSF--AKIAHKYSYCKPNITESNEISII--EGRHPVIEI 601
Query: 535 Q-GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+I ND + ++TGPNM GKSTY+R + + + +AQIG FVP SA I
Sbjct: 602 NLDENEFIANDTNIGQDDNLIQIITGPNMAGKSTYMRQMALIIIMAQIGSFVPAKSAEIG 661
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ D+IFTR+GA+D+ +G STFM+EM E + +IK TE S VI+DE+GRGTS+ DG +A
Sbjct: 662 ICDKIFTRIGASDNISKGESTFMLEMNEVSNIIKNSTEKSFVILDEVGRGTSSDDGLSIA 721
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
++ L+ H++ T+FATHFHE+ +L + RN+++ LE+ +NL+ L ++ G
Sbjct: 722 MALVEYLSKHKKVKTVFATHFHELTVLESELKNVRNLKIEILEENNNLIFLRKISRGKSD 781
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLMKE 740
+SYG+ AK++G P+++LE A+++M++
Sbjct: 782 RSYGIEVAKLSGLPDEILENAKNIMEK 808
>gi|400291073|ref|ZP_10793100.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
gi|399921864|gb|EJN94681.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
Length = 849
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 281/545 (51%), Gaps = 37/545 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ M+ SSL +L + + S + + SL +LD +T G RLL W+ +PL I
Sbjct: 249 YLQMTYTTKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTRLLRTWIDRPLVSHKLIS 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R + + ++ R +L + +L+G+ D++ LA R+ KA KD ++ + ++Q+P +
Sbjct: 307 KRQDIIQVFLDQFFERSDLSD-SLKGVYDIERLASRVSFGKANPKDLLQLGQTLAQVPII 365
Query: 347 ISILES--------LVQNVE-----------ASNLNTILSSLQSLKMMDRKDAVMDKMKE 387
+ILES LV ++ A + N ++ + + D +DK ++
Sbjct: 366 KAILESFDSPALEDLVGQIDPLPELEELIRSAIDPNAPMTITEGSIIRAGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T ++ A + T+K++ N G+ + +T + + + + T++
Sbjct: 426 VMREGTGWIADIEAKERTASGISTLKIDYNKKDGYYFHVTNSNLSLVPEYFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + E + I + Y + L L+ LA DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREESANLEYDIFMRIRAQVETYIERLQTLAKYLATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLV 557
++ + YVRP + + RH ++E + G YIPN ++F + S L+
Sbjct: 546 AVVAEN--NHYVRPVFN--DDKIISIENGRHAVIEKVMGSQEYIPNTIHFDQ-KTSIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + ++V +AQ+G FV DSA + V D IFTR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALTVIMAQMGSFVAADSAALPVFDAIFTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK ENSL++ DELGRGT+T+DG +A +I + + T+FATH+HE+
Sbjct: 661 EMMEANHAIKAADENSLILFDELGRGTATYDGMALAQAIIEYVHDKIKAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE+ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TDLSTTLTDLVNVHVATLEKNGEVTFLHKITDGPADKSYGIHVAKIAGLPRDLLNRADHI 780
Query: 738 MKEYE 742
+ + E
Sbjct: 781 LADLE 785
>gi|227524330|ref|ZP_03954379.1| DNA mismatch repair protein MutS [Lactobacillus hilgardii ATCC
8290]
gi|227088561|gb|EEI23873.1| DNA mismatch repair protein MutS [Lactobacillus hilgardii ATCC
8290]
Length = 863
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 276/552 (50%), Gaps = 45/552 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD+ +T G R L QW+++PL + I ER AV +L+++ R L + ++ +
Sbjct: 271 TLLWLLDQTKTAMGGRKLKQWIERPLVNKSKISERQDAVGVLLDHYYERSQLQDELIK-V 329
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK 373
D++ LA RI +D ++ + Q+PK+ ILE + N L ++ +
Sbjct: 330 YDLERLAGRIAFGSVNGRDLIQLKTSLQQVPKIKYILEQIADNSFKDMLKDLIPLDDIVD 389
Query: 374 MMDR----------------KDAVMDKMKEYLESTARRLNLVADKTIK------LENSPQ 411
+ R KD D++ +Y +++ +A+ K + N
Sbjct: 390 EISRSIIEQPPISVTDGGVIKDGFDDQLDKYRDASNNGQKWLAELEAKERQVTGINNLKV 449
Query: 412 GF----AYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
GF Y I + LN ++RY T+ RF L Q + +T +
Sbjct: 450 GFNHVFGYYIEVTKVNLNKMPENRYQRKQTLANAERFSTPELKEKEALILEAQEQSKTLE 509
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ + + + L+D +A DVL SF A+ ++RP + + +
Sbjct: 510 YKLFVRIRDDIKKSIKRIQALADAVASIDVLQSF--ANVSEEYRFIRPTL--TNDHRVKV 565
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP+VE + G Y+PN+V + S L+TGPNM GKSTY+R + + V + Q+GC
Sbjct: 566 IDGRHPVVEKVLGHQQYVPNNVDMGE-DTSVLLITGPNMSGKSTYMRQMALCVIMNQMGC 624
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP AT+ V D+IFTR+GAAD G STFM+EMKE I+ T NSL++ DE+GRG
Sbjct: 625 FVPAKKATLPVFDKIFTRIGAADDLISGQSTFMVEMKEANDAIENATPNSLILFDEIGRG 684
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A +I + ++ TLF+TH+HE+ L + +NV V A E LV
Sbjct: 685 TATYDGMALAQAIIEYVHNNIGAKTLFSTHYHELTSLDESLKQLQNVHVGATESNGELVF 744
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD-----TKTPSGDETNNR 758
L++++PG KSYG+H AK+AG P +L++A ++ + E D TPS
Sbjct: 745 LHKIQPGPADKSYGIHVAKLAGLPNGLLKRANHILTDLEKKDDQPDKINATPS----KQN 800
Query: 759 EEEYFKTVQEGE 770
+E KT Q GE
Sbjct: 801 HDERVKTKQAGE 812
>gi|227513115|ref|ZP_03943164.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577]
gi|227083690|gb|EEI19002.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577]
Length = 862
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 276/552 (50%), Gaps = 45/552 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD+ +T G R L QW+++PL + I ER AV +L+++ R L + ++ +
Sbjct: 271 TLLWLLDQTKTAMGGRKLKQWIERPLVNKSKISERQDAVGVLLDHYYERSQLQDELIK-V 329
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK 373
D++ LA RI +D ++ + Q+PK+ ILE + N L ++ +
Sbjct: 330 YDLERLAGRIAFGSVNGRDLIQLKTSLQQVPKIKYILEQIADNSFKDMLKDLIPLDDIVD 389
Query: 374 MMDR----------------KDAVMDKMKEYLESTARRLNLVADKTIK------LENSPQ 411
+ R KD D++ +Y +++ +A+ K + N
Sbjct: 390 EISRSIIEQPPISVTDGGVIKDGFDDQLDKYRDASNNGQKWLAELEAKERQVTGINNLKV 449
Query: 412 GF----AYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
GF Y I + LN ++RY T+ RF L Q + +T +
Sbjct: 450 GFNHVFGYYIEVTKVNLNKIPENRYQRKQTLANAERFSTPELKEKEALILEAQEQSKTLE 509
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ + + + L+D +A DVL SF A+ ++RP + + +
Sbjct: 510 YKLFVRIRDDIKKSIKRIQALADAVASIDVLQSF--ANVSEEYRFIRPTL--TNDHRVKV 565
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP+VE + G Y+PN+V + S L+TGPNM GKSTY+R + + V + Q+GC
Sbjct: 566 IDGRHPVVEKVLGHQQYVPNNVDMGE-DTSVLLITGPNMSGKSTYMRQMALCVIMNQMGC 624
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP AT+ V D+IFTR+GAAD G STFM+EMKE I+ T NSL++ DE+GRG
Sbjct: 625 FVPAKKATLPVFDKIFTRIGAADDLISGQSTFMVEMKEANDAIENATPNSLILFDEIGRG 684
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A +I + ++ TLF+TH+HE+ L + +NV V A E LV
Sbjct: 685 TATYDGMALAQAIIEYVHNNIGAKTLFSTHYHELTSLDESLKQLQNVHVGATESNGELVF 744
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD-----TKTPSGDETNNR 758
L++++PG KSYG+H AK+AG P +L++A ++ + E D TPS
Sbjct: 745 LHKIQPGPADKSYGIHVAKLAGLPNGLLKRANHILTDLEKKDDQPDKINATPS----KQN 800
Query: 759 EEEYFKTVQEGE 770
+E KT Q GE
Sbjct: 801 HDERVKTKQAGE 812
>gi|116514520|ref|YP_813426.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274748|sp|Q048Y4.1|MUTS_LACDB RecName: Full=DNA mismatch repair protein MutS
gi|116093835|gb|ABJ58988.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 856
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 288/583 (49%), Gaps = 52/583 (8%)
Query: 197 CLRSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
+R L+ YL L + ++ + S + +Y+ M++ V +L + Q +T+ + SL
Sbjct: 223 AVRQLVVYL-LATQKRSLAHLQVAESFEIGQYLQMANTVQRNLEL--TQSATTGRKQGSL 279
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+LD+ T G RLL QW+ +PL LD I +R V L+++ R N+ + +L+G+ D
Sbjct: 280 FWVLDKTTTAMGGRLLKQWLSRPLLSLDRIKQRQQMVQALLDDYFTRENIVD-SLKGVYD 338
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL--------ESLVQNVEASN--LNTI 365
++ L+ R+ ++ ++ + + +I L E Q ++ + +I
Sbjct: 339 LERLSGRVAFGNVNPRELLQLAKSLEATKLIIQTLVESGNPDLEKYGQGIDPQSELAESI 398
Query: 366 LSSLQSLKMMDRKDAV---------MDKMKEYLESTARRL---NLVADKTIKLENSPQG- 412
+ L + KD +DK +E + + L + + ++N G
Sbjct: 399 TNCLVDQPPISAKDGGIIRAGVSEDLDKYREAMNGGKKWLAQMEMEERQRTGIDNLKIGY 458
Query: 413 ---FAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLAT-ANTQYQAIQR----EYE 461
F Y I + N DRYT T+ R+ L N +A R EYE
Sbjct: 459 NRVFGYFIQVSKGNVAKVPQDRYTRKQTLTNAERYITPELKEHENLILEAESRSTDLEYE 518
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q + E + + L +L LA DV V+F A K Y RP
Sbjct: 519 LFSQ--LREAV---KAHIPDLQELGRQLAALDVFVAF--AQDAEEKNYCRPSFS--SKNE 569
Query: 522 LVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
+ + RHP+VE L G SYIPND+ + S L+TGPNM GKSTY+R + + +A
Sbjct: 570 IAVKNGRHPVVEAVLPAG-SYIPNDLVMDE-DTSIYLITGPNMSGKSTYMRQLALIAIMA 627
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
QIG FVP DSA + V DQIFTR+GAAD Y G STFM+EM E ++ + SLV+ DE
Sbjct: 628 QIGSFVPADSAKLPVFDQIFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDE 687
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+T+DG +A +I + L TLFATH+HE+ L + +N+ V A E+
Sbjct: 688 IGRGTATYDGMALAGAIIKYLHDKVGAKTLFATHYHELTELDETLLHLKNIHVGATEENG 747
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L+++ PG +SYG+H AK+AG P +L +A ++K E
Sbjct: 748 KLIFLHKILPGPADQSYGIHVAKLAGLPRAVLREASSMLKRLE 790
>gi|297544629|ref|YP_003676931.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842404|gb|ADH60920.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 866
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 199/692 (28%), Positives = 345/692 (49%), Gaps = 67/692 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T Y EI + + I++ +P E + ++L +NK + I N
Sbjct: 137 GICAVDVTTGDLYATEIKNCKDNKKVYDEIIKYAPSEIIANEDFLKNNK--YIKIFKSNN 194
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ +K + EE ++++ E + + L E+ + + + SL +N
Sbjct: 195 CAVNTYEKKLYYEEK-----SKII-----ENQFNKKLEELGIKDKPYVVNSLSTLFCYLN 244
Query: 210 NED-----NMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRT 264
++N+ I+ + + Y+ + S + +L +L + S + SLLG+LD+ T
Sbjct: 245 ELQKTALKHINKLLIY--EDNSYMGLDSNAIKNLEILESNKNKSKKG--SLLGVLDKTVT 300
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG 324
P G RLL +W+++PL + + I R AV L N+ + R +L + L + D++ L+ +I
Sbjct: 301 PMGGRLLKKWLEEPLLNKEHIDARLQAVEELFNDYKNRQDLKQ-LLNKIYDLERLSSKIV 359
Query: 325 RKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL-KMMDR------ 377
+ KD + + LP + IL+ + ++ +LQ + +++D+
Sbjct: 360 YQSINPKDFISIKLSLQNLPYIKEILQRFSSRL-LKDIYEKFDTLQDIYELIDKSIKDDP 418
Query: 378 ----------KDA---VMDKM-KEYLESTARRLNLVADKTIK--LENSPQG----FAYRI 417
KD +DK+ K +E NL A++ K ++N G F Y I
Sbjct: 419 STQLKEGNIIKDGYNETVDKLRKASVEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYI 478
Query: 418 TMKLNN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIVEE 470
+ +N + ++Y T+ R+ L A + + I+ EY+ + + E
Sbjct: 479 EVTKSNIPQVPEKYIRKQTLANAERYVTPELKEIEEAILGAEEKLIELEYQLFNE--IRE 536
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
I + Q + +A DVL+SF A Y +P + + +V+ + RHP
Sbjct: 537 KIELQIVRIQ---DTAKYIATIDVLISF--AEVAETNRYTKPIVD--YSDRIVIKEGRHP 589
Query: 531 IVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
++E S++ ND+ E ++TGPNM GKSTY+R + + V +AQIG FVP A
Sbjct: 590 VIETISDESFVANDIEI-GPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYA 648
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
I +VD+IFTRVGA+D + G STFM+EM E A ++K T SL+I+DE+GRGTST+DG
Sbjct: 649 KIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGM 708
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
+A ++ + + TLFATH+HE+ L + RN VS E+ED+++ L ++ PG
Sbjct: 709 SIAHAVIEYIHEKIKAKTLFATHYHELTKLEGKMKGVRNYNVSVEEREDDIIFLRKIVPG 768
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+ +K+AG P ++E+A++++K E
Sbjct: 769 GADKSYGIQVSKLAGLPYSIVERAKEILKSLE 800
>gi|297530518|ref|YP_003671793.1| DNA mismatch repair protein MutS [Geobacillus sp. C56-T3]
gi|297253770|gb|ADI27216.1| DNA mismatch repair protein MutS [Geobacillus sp. C56-T3]
Length = 903
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 279/568 (49%), Gaps = 54/568 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D++ ++ +D+ Y+ M S LH+ + S SLL +LD T G RLL
Sbjct: 239 DHLQPAELYQVDH--YMKMDR--HSKLHLELVETVRSKGRKGSLLWLLDETVTAMGGRLL 294
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL D I R V L + R L + LRG+ D++ L R+ A +
Sbjct: 295 KQWLDRPLIDRREIERRLDFVETLKTSYFERQELRDR-LRGVYDIERLVGRVSYGNANAR 353
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------------------- 372
D ++ + + Q+P L + +L EA L L + L
Sbjct: 354 DLVQLKKSLLQVPALRQTVGAL-PVAEADKLCERLDPCEELVDLLERSIQEQPPLSVKEG 412
Query: 373 --------KMMDR-KDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRITMKLNN 423
K +DR +DA + E A+ K++K+ + + F Y I + N
Sbjct: 413 NLIKDGYDKQLDRYRDASRNGKAWIAELEAKEREATGIKSLKVGYN-RVFGYYIEVTKPN 471
Query: 424 ---SIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
+ RY T+ RF ++ + ++I+ EYE +I E+V
Sbjct: 472 LPLVPEGRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFV-AIREQV---- 526
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-L 534
Y L L+ +A+ DVL SF A+ YVRP LV+ RHP+VE +
Sbjct: 527 KQYIPRLQTLAKAIAELDVLQSF--ATISDEYRYVRPQFSTERV--LVIQGGRHPVVEKV 582
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G Y+PND Y E L+TGPNM GKSTY+R + ++ +AQIGCFVP + A + +
Sbjct: 583 LGAQMYVPNDCYMNR-EREMLLITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPI 641
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+GRGTST+DG +A
Sbjct: 642 FDQVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQ 701
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
+I + H TLF+TH+HE+ L R +P NV A+E+ +V L+Q+ G K
Sbjct: 702 AIIEYIHDHIGAKTLFSTHYHELTALERSLPRLSNVHARAIEENGKVVFLHQIADGPADK 761
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+H A++AG P ++E+AR ++ E E
Sbjct: 762 SYGIHVAELAGLPASLIERARAILAELE 789
>gi|19746989|ref|NP_608125.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS8232]
gi|25453124|sp|Q8NZ24.1|MUTS_STRP8 RecName: Full=DNA mismatch repair protein MutS
gi|19749244|gb|AAL98624.1| putative DNA mismatch repair protein [Streptococcus pyogenes
MGAS8232]
Length = 851
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 310/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFNSPCVDKLVNDI-DSLPELEYLIRTAIDTDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 TGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTTSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQSLAVVAET--NHYIRPQFN--DNHMITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLIRLE 785
>gi|312111577|ref|YP_003989893.1| DNA mismatch repair protein MutS [Geobacillus sp. Y4.1MC1]
gi|311216678|gb|ADP75282.1| DNA mismatch repair protein MutS [Geobacillus sp. Y4.1MC1]
Length = 864
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 180/565 (31%), Positives = 284/565 (50%), Gaps = 56/565 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D+M ++ +D+ +M + S ++ + S SLL +LD T G RLL
Sbjct: 239 DHMQPVQVYQVDH----YMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTAMGGRLL 294
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL D I R V L+++ R L E LR + D++ LA R+ +
Sbjct: 295 KQWLDRPLLDRGQIERRLHMVETLIHHYFERQELRE-RLREVYDVERLAGRVAYGNVNAR 353
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNL--------------------NTILSSLQS 371
D ++ + + Q+P L I+ L + +A L N LS +
Sbjct: 354 DLIQLKKSLQQIPALKDIVAKLADS-QAQQLADKLDPCSELVDLLERSIQENPPLSVKEG 412
Query: 372 LKMMDRKDAVMDKMKEY----------LESTARRLNLVADKTIKLE-NSPQGFAYRITM- 419
+ D + +D+ ++ LES R L + K++K+ N G+ +T
Sbjct: 413 NIIKDGYNETLDRFRDASRNGKSWIAQLESKERELTGI--KSLKIGYNRVFGYYIEVTKP 470
Query: 420 KLNNSIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
L+ RY T+ RF ++ + ++I+ EYE I E V
Sbjct: 471 NLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFV-DIRERV--- 526
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
Y L L+ +++ DVL SF A+ + YV+P L++ RHP+VE
Sbjct: 527 -KQYIPRLQSLAKAISELDVLQSF--ATVSEERHYVKPQFSEHR--ELIIQAGRHPVVEK 581
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G +Y+PND Y E L+TGPNM GKSTY+R I ++ +AQIGCFVP D A +
Sbjct: 582 VLGTQTYVPNDCYMNK-ERELLLITGPNMSGKSTYMRQIALTAIMAQIGCFVPADKAVLP 640
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+GRGTST+DG +A
Sbjct: 641 IFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGMALA 700
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
+I + H TLF+TH+HE+ L + +P +NV VSA+E+ +V L++++ G
Sbjct: 701 QAIIEYIHDHIGAKTLFSTHYHELTDLEQSLPKLKNVHVSAVEENGKVVFLHKIEEGPAD 760
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLM 738
+SYG+H A++AG P ++ +A +++
Sbjct: 761 QSYGIHVAELAGLPSSLIRRAEEIL 785
>gi|227510187|ref|ZP_03940236.1| DNA mismatch repair protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190392|gb|EEI70459.1| DNA mismatch repair protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 862
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 276/552 (50%), Gaps = 45/552 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD+ +T G R L QW+++PL + I ER AV +L+++ R L + ++ +
Sbjct: 271 TLLWLLDQTKTAMGGRKLKQWIERPLVNKSKISERQDAVGVLLDHYYERSQLQDELIK-V 329
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK 373
D++ LA RI +D ++ + Q+PK+ ILE + N L ++ +
Sbjct: 330 YDLERLAGRIAFGSVNGRDLIQLKTSLQQVPKIKYILEQIADNSFKDMLKDLIPLDDIVD 389
Query: 374 MMDR----------------KDAVMDKMKEYLESTARRLNLVADKTIK------LENSPQ 411
+ R KD D++ +Y +++ +A+ K + N
Sbjct: 390 EISRSIIEQPPISVTDGGVIKDGFDDQLDKYRDASNNGQKWLAELEAKERQVTGINNLKV 449
Query: 412 GF----AYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
GF Y I + LN ++RY T+ RF L Q + +T +
Sbjct: 450 GFNHVFGYYIEVTKVNLNKIPENRYQRKQTLANAERFSTPELKEKEALILEAQEQSKTLE 509
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ + + + L+D +A DVL SF A+ ++RP + + +
Sbjct: 510 YKLFVRIRDDIKKSIKRIQALADAVASIDVLQSF--ANVSEEYRFIRPTL--TNDHRVKV 565
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP+VE + G Y+PN+V + S L+TGPNM GKSTY+R + + V + Q+GC
Sbjct: 566 IDGRHPVVEKVLGHQQYVPNNVDMGE-DTSVLLITGPNMSGKSTYMRQMALCVIMNQMGC 624
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP AT+ V D+IFTR+GAAD G STFM+EMKE I+ T NSL++ DE+GRG
Sbjct: 625 FVPAKKATLPVFDKIFTRIGAADDLISGQSTFMVEMKEANDAIENATPNSLILFDEIGRG 684
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A +I + ++ TLF+TH+HE+ L + +NV V A E LV
Sbjct: 685 TATYDGMALAQAIIEYVHNNIGAKTLFSTHYHELTSLDESLKQLQNVHVGATESNGELVF 744
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD-----TKTPSGDETNNR 758
L++++PG KSYG+H AK+AG P +L++A ++ + E D TPS
Sbjct: 745 LHKIQPGPADKSYGIHVAKLAGLPNGLLKRANHILTDLEKKDDQPDKINATPS----KQN 800
Query: 759 EEEYFKTVQEGE 770
+E KT Q GE
Sbjct: 801 HDERVKTKQAGE 812
>gi|422881011|ref|ZP_16927467.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK355]
gi|332365453|gb|EGJ43214.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK355]
Length = 849
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 189/657 (28%), Positives = 320/657 (48%), Gaps = 64/657 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + H + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAHHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + +++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEA-SNLNTILSSLQSL----- 372
K KD ++ + +P++ +IL+ L++ ++ L ++SS S
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAISPDAPHI 405
Query: 373 ------------KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRI 417
+ +D+ V+ + + LE R + +++ I N G+ + +
Sbjct: 406 ITEGNIIRTGFDETLDQYRLVLREGTGWIAELEVKERANSGISNLKIDY-NKKDGYYFHV 464
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQ 465
T + + T++ RF + LA +AN +Y+ R
Sbjct: 465 TNSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR------- 517
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
I EE + Y Q L L+ LA DVL SF A+ + VRP L +
Sbjct: 518 -IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPVFT--AERRLQIE 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G SYIPN + + L+TGPNM GKSTY+R + + V +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQSYIPNSILLDQ-KTDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT
Sbjct: 628 VPAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++ + L
Sbjct: 688 ATYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALENSLEHLENVHVATLEKDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEE 761
++++PG KSYG+H AK+AG P+ +LE+A ++ E S DT S T +R ++
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPKKLLERADSILSHLE-SQDTGLGSELPTASRPKQ 803
>gi|333395619|ref|ZP_08477436.1| DNA mismatch repair protein MutS [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 881
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 265/525 (50%), Gaps = 36/525 (6%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ Q +LL +LD +T G RLL QW+ +PL + I +R V L+++ R +L +
Sbjct: 273 TGQRSGTLLWLLDATKTAMGGRLLKQWLDRPLINATQIKQRQDKVASLMDHFFERSSLQD 332
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-------------- 353
L + D++ LA R+ +D ++ + Q+PKL +IL +
Sbjct: 333 -ELTKVYDLERLAGRVAFGNVNGRDLIQLKTSLLQIPKLKAILTDINDGTFDDVIDHLDP 391
Query: 354 ---VQNVEASNLN----------TILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVA 400
V ++ +N ++ + ++ D +DA+ + + E A+
Sbjct: 392 VSDVADLIDRAINDEPPLSIKDGNVIKPHYNQQLDDYRDAMKNGKQWIAELQAKERAATG 451
Query: 401 DKTIKLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
T+K+ N G+ +T L +DRY T+ RF L T Q
Sbjct: 452 IHTLKIGFNRVFGYYIEVTKANLAALPEDRYERKQTLTNAERFSTPELKEKETLILEAQE 511
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ + + V L +L+ +A DVL SF++ S YVRP +
Sbjct: 512 KSTALEYDLFTAVREQVKQQIHRLQRLAKGVAALDVLQSFAVVSET--YHYVRPTLTKAH 569
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+V RHP+VE + G YIPNDV + L+TGPNM GKSTY+R + ++V
Sbjct: 570 DLEIVAG--RHPVVEKVLGEQKYIPNDVTMDADNTIL-LITGPNMSGKSTYMRQLALTVI 626
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQIGCF+P AT+ + DQIFTR+GAAD G STFM+EM E+ T + TENSL++
Sbjct: 627 MAQIGCFIPATKATLPIFDQIFTRIGAADDLISGQSTFMVEMMESNTALAHATENSLILF 686
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGT+T+DG +A +I L H TLF+TH+HE+ L +P RNV V A+E+
Sbjct: 687 DEIGRGTATYDGMALAQAIIEYLHDHVHAKTLFSTHYHELTALDTDLPHLRNVHVGAVEE 746
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LV L+++ G+ KSYG+H AK+AG P+ +L +A ++ E
Sbjct: 747 NGTLVFLHKMMAGAADKSYGIHVAKLAGLPDSLLTRATTILAGLE 791
>gi|422872497|ref|ZP_16918990.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1087]
gi|328944747|gb|EGG38908.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1087]
Length = 849
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 181/634 (28%), Positives = 306/634 (48%), Gaps = 46/634 (7%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + +++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRK-------- 378
K KD ++ + +P++ +IL Q + + +L T++ L + +
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAIL----QGIGSPHLATLIEGLDPIPELAGLISSAISPD 401
Query: 379 ---------------DAVMDKMKEYL-ESTARRLNLVADKTI-------KLE-NSPQGFA 414
D +D+ + L E T L + + K++ N G+
Sbjct: 402 APHIITEGNIIRTGFDETLDQYRLVLREGTGWIAELEVKERVNSGISNLKIDYNKKDGYY 461
Query: 415 YRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
+ +T + + T++ RF + LA + + + + I +
Sbjct: 462 FHVTNSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIRDE 521
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
+ Y Q L L+ LA DVL SF A+ + VRP L + + RH +VE
Sbjct: 522 AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPSFT--AERRLQIEKGRHAVVEK 577
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G SYIPN + E + L+TGPNM GKSTY+R + + V +AQ+G +VP SA++
Sbjct: 578 VMGAQSYIPNSILLDQ-ETNIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVPAQSASLP 636
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+T+DG +A
Sbjct: 637 LFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTATYDGMALA 696
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
+I + + TLFATH+HE+ L + NV V+ LE + + L++++PG
Sbjct: 697 QAIIEHIHHYTGAKTLFATHYHELTALEDSLEHLENVHVATLENDGQVTFLHKIEPGPAD 756
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
KSYG+H AK+AG PE +LE+A ++ E S DT
Sbjct: 757 KSYGIHVAKIAGLPEKLLERADSILSHLE-SQDT 789
>gi|331701278|ref|YP_004398237.1| DNA mismatch repair protein mutS [Lactobacillus buchneri NRRL
B-30929]
gi|329128621|gb|AEB73174.1| DNA mismatch repair protein mutS [Lactobacillus buchneri NRRL
B-30929]
Length = 862
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 266/524 (50%), Gaps = 38/524 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD+ +T G R L QW+++PL + I +RH AV +L+++ R L + ++ +
Sbjct: 279 TLLWLLDQTKTAMGGRKLKQWIERPLVNRKLINQRHDAVAVLLDHYFERNQLQDELIK-V 337
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK 373
D++ LA RI +D ++ + Q+PK+ ILE + L ++ +
Sbjct: 338 YDLERLAGRISFGSVNGRDLIQLKASLKQVPKIKYILEQIADKSFEDMLKNLVPLDDVVD 397
Query: 374 MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTIKLENSPQ 411
+D KD ++ Y ++T +A+ K + N
Sbjct: 398 EIDSAIVEEPPISVTDGGVIKDGYNQQLDTYRDATNNGQKWLAELEAKERKITGINNLKV 457
Query: 412 GF----AYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
GF Y I + LN +RY T+ RF L Q + +T +
Sbjct: 458 GFNHVFGYYIEVTKVNLNKIPANRYQRKQTLANAERFSTPELKEKEALILEAQEQSKTLE 517
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV- 523
+ ++ + + L+D +A DVL SF A+ +VRP + T +V
Sbjct: 518 YKLFVKIRDDIKKSIKRIQDLADAVASIDVLQSF--AAVSEEYRFVRPTLT---TQHVVE 572
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
+ RHP+VE + G Y+PNDV + S L+TGPNM GKSTY+R + + V + Q+G
Sbjct: 573 VKDGRHPVVEKVLGHQQYVPNDVNLGE-DTSILLITGPNMSGKSTYMRQMALCVIMNQMG 631
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVP A + V D+IFTR+GAAD G STFM+EMKE I+ T NSL++ DE+GR
Sbjct: 632 CFVPAKHAKLPVFDKIFTRIGAADDLISGQSTFMVEMKEANDAIENATPNSLILFDEIGR 691
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + ++ TLF+TH+HE+ +L + +NV V A E LV
Sbjct: 692 GTATYDGMALAQAIIEYVHNNIGAKTLFSTHYHELTVLDESLKRLQNVHVGATESNGELV 751
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
L++++PG KSYG+H AK+AG PE +L +A D++ E D
Sbjct: 752 FLHKIQPGPADKSYGIHVAKLAGLPEGLLHRANDILTNLEQQAD 795
>gi|125719039|ref|YP_001036172.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK36]
gi|166232147|sp|A3CR17.1|MUTS_STRSV RecName: Full=DNA mismatch repair protein MutS
gi|125498956|gb|ABN45622.1| DNA mismatch repair protein hexA, putative [Streptococcus sanguinis
SK36]
Length = 849
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 190/658 (28%), Positives = 320/658 (48%), Gaps = 66/658 (10%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + +++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCY-------------------------RVYEGVSQLPKLISILESLVQNVEASN 361
K K+ R+ EG+ +P+L ++ S + + +A +
Sbjct: 346 KTNPKELLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAI-SPDAPH 404
Query: 362 LNTILSSLQSL--KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYR 416
+ T + +Q+ + +D+ V+ + + LE R + +++ I N G+ +
Sbjct: 405 IITEGNIIQTGFDETLDQYRLVLREGTGWIAELEVKERANSGISNLKIDY-NKKDGYYFH 463
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQ 464
+T + + T++ RF + LA +AN +Y+ R
Sbjct: 464 VTNSQLAHVPSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR------ 517
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
I EE + Y Q L L+ LA DVL SF A+ + VRP L +
Sbjct: 518 --IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPVFT--AERRLQI 567
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
+ RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G
Sbjct: 568 EKGRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGS 626
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
+VP SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRG
Sbjct: 627 YVPAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRG 686
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++ +
Sbjct: 687 TATYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALEESLEHLENVHVATLEKDGQVTF 746
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEE 761
L++++PG KSYG+H AK+AG PE +LE+A ++ E S DT S T +R ++
Sbjct: 747 LHKIEPGPADKSYGIHVAKIAGLPEKLLERADSILSHLE-SQDTGLGSELPTASRPKQ 803
>gi|56419841|ref|YP_147159.1| DNA mismatch repair protein MutS [Geobacillus kaustophilus HTA426]
gi|81675852|sp|Q5L0E5.1|MUTS_GEOKA RecName: Full=DNA mismatch repair protein MutS
gi|56379683|dbj|BAD75591.1| DNA mismatch repair protein [Geobacillus kaustophilus HTA426]
Length = 896
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 279/568 (49%), Gaps = 54/568 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D++ ++ +D+ Y+ M S LH+ + S SLL +LD T G RLL
Sbjct: 232 DHLQPAELYQVDH--YMKMDR--HSKLHLELVETVRSKGRKGSLLWLLDETVTAMGGRLL 287
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL D I R V L + R L + LRG+ D++ L R+ A +
Sbjct: 288 KQWLDRPLIDRREIERRLDFVETLKTSYFERQELRDR-LRGVYDIERLVGRVSYGNANAR 346
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------------------- 372
D ++ + + Q+P L + +L EA L L + L
Sbjct: 347 DLVQLKKSLLQVPALRQTVGAL-PLAEADKLCERLDPCEELVDLLERSIQEQPPLSVKEG 405
Query: 373 --------KMMDR-KDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRITMKLNN 423
K +DR +DA + E A+ K++K+ + + F Y I + N
Sbjct: 406 NLIKDGYDKQLDRYRDASRNGKAWIAELEAKEREATGIKSLKVGYN-RVFGYYIEVTKPN 464
Query: 424 ---SIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
+ RY T+ RF ++ + ++I+ EYE +I E+V
Sbjct: 465 LPLVPEGRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFV-AIREQV---- 519
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-L 534
Y L L+ +A+ DVL SF A+ YVRP LV+ RHP+VE +
Sbjct: 520 KQYIPRLQTLAKAIAELDVLQSF--ATISDEYRYVRPQFSTERV--LVIQGGRHPVVEKV 575
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G Y+PND Y E L+TGPNM GKSTY+R + ++ +AQIGCFVP + A + +
Sbjct: 576 LGAQMYVPNDCYMNR-EREMLLITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPI 634
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+GRGTST+DG +A
Sbjct: 635 FDQVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQ 694
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
+I + H TLF+TH+HE+ L R +P NV A+E+ +V L+Q+ G K
Sbjct: 695 AIIEYIHDHIGAKTLFSTHYHELTALERSLPRLSNVHARAIEENGKVVFLHQIADGPADK 754
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+H A++AG P ++E+AR ++ E E
Sbjct: 755 SYGIHVAELAGLPASLIERARAILAELE 782
>gi|422861714|ref|ZP_16908354.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK330]
gi|327467947|gb|EGF13437.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK330]
Length = 849
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 193/659 (29%), Positives = 314/659 (47%), Gaps = 72/659 (10%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + +++ R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCY-------------------------RVYEGVSQLPKLISILESLVQ------ 355
K KD R+ EG+ +P+L ++ S +
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAISPDAPHI 405
Query: 356 ----NVEASNLNTILSSLQSLKMMDRKDAVMD-KMKEYLESTARRLNLVADK-------- 402
N+ + + L + L + D + + ++KE S L + +K
Sbjct: 406 ITEGNIIRTGFDETLDQYR-LVLRDGTGWIAELEVKERANSGISNLKIDYNKKDGYYFHV 464
Query: 403 -TIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+L + P F + T+K NS +R+ + R + R +AN +Y+ R
Sbjct: 465 TNSQLAHVPSHFFRKATLK--NS--ERFGTEELARIEGEMLEAREKSANLEYEIFMR--- 517
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
I EE + Y Q L L+ LA DVL SF A+ VRP
Sbjct: 518 -----IREE----AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQLHLVRPVFT--SERR 564
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
L + + RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ
Sbjct: 565 LQIEKGRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQ 623
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G +VP SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DEL
Sbjct: 624 MGSYVPAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDEL 683
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + + TLFATH+HE+ L + NV V+ LE++
Sbjct: 684 GRGTATYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALEESLEHLENVHVATLEKDGQ 743
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNRE 759
+ L++++PG KSYG+H AK+AG PE +LE+A ++ E S DT S T +R+
Sbjct: 744 VTFLHKIEPGPADKSYGIHVAKIAGLPEKLLERADSILSHLE-SQDTGIDSELPTESRQ 801
>gi|261419511|ref|YP_003253193.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC61]
gi|319766326|ref|YP_004131827.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC52]
gi|448237462|ref|YP_007401520.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
gi|261375968|gb|ACX78711.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC61]
gi|317111192|gb|ADU93684.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC52]
gi|445206304|gb|AGE21769.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
Length = 903
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 279/568 (49%), Gaps = 54/568 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D++ ++ +D+ Y+ M S LH+ + S SLL +LD T G RLL
Sbjct: 239 DHLQPAELYQVDH--YMKMDR--HSKLHLELVETVRSKGRKGSLLWLLDETVTAMGGRLL 294
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL D I R V L + R L + LRG+ D++ L R+ A +
Sbjct: 295 KQWLDRPLIDRREIERRLDFVETLKTSYFERQELRDR-LRGVYDIERLVGRVSYGNANAR 353
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------------------- 372
D ++ + + Q+P L + +L EA L L + L
Sbjct: 354 DLVQLKKSLLQVPALRQTVGAL-PLAEADKLCERLDPCEELVDLLERSIQEQPPLSVKEG 412
Query: 373 --------KMMDR-KDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRITMKLNN 423
K +DR +DA + E A+ K++K+ + + F Y I + N
Sbjct: 413 NLIKDGYDKQLDRYRDASRNGKAWIAELEAKEREATGIKSLKVGYN-RVFGYYIEVTKPN 471
Query: 424 ---SIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
+ RY T+ RF ++ + ++I+ EYE +I E+V
Sbjct: 472 LPLVPEGRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFV-AIREQV---- 526
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-L 534
Y L L+ +A+ DVL SF A+ YVRP LV+ RHP+VE +
Sbjct: 527 KQYIPRLQTLAKAIAELDVLQSF--ATISDEYRYVRPQFSTERV--LVIQGGRHPVVEKV 582
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G Y+PND Y E L+TGPNM GKSTY+R + ++ +AQIGCFVP + A + +
Sbjct: 583 LGAQMYVPNDCYMNR-EREMLLITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPI 641
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+GRGTST+DG +A
Sbjct: 642 FDQVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQ 701
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
+I + H TLF+TH+HE+ L R +P NV A+E+ +V L+Q+ G K
Sbjct: 702 AIIEYIHDHIGAKTLFSTHYHELTALERSLPRLSNVHARAIEENGKVVFLHQIADGPADK 761
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+H A++AG P ++E+AR ++ E E
Sbjct: 762 SYGIHVAELAGLPASLIERARAILAELE 789
>gi|357235483|ref|ZP_09122826.1| putative DNA mismatch repair protein MutS [Streptococcus criceti
HS-6]
gi|356883465|gb|EHI73665.1| putative DNA mismatch repair protein MutS [Streptococcus criceti
HS-6]
Length = 853
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 189/669 (28%), Positives = 322/669 (48%), Gaps = 59/669 (8%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVR-----FDDSELKNARLLPEMCLTTATHCLRSL 201
+ + + G + N+ E L + +N L+ +DD +L L P + L
Sbjct: 169 KAREVVLGFELNDKQTESLTKQMNLLLSPEKEIYDDVQLIGTDLRP-----VESQAAGKL 223
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
+ Y+ + + S+ + ++ M+ A +SL +L + + + + + SL +LD
Sbjct: 224 LQYVHTTQKRELSHLQSLVHYEIKDFLQMTYATKTSLDLL--ENARTTKKHGSLFWLLDS 281
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
+T G RLL W+ +PL + I+ER V ++N R +L + +L+G+ D++ LA
Sbjct: 282 TKTAMGMRLLRSWIDRPLVSREKILERQEIVQTFLDNFFERSDLTD-SLKGVYDIERLAS 340
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL--------- 372
R+ KA KD ++ ++Q+PK+ +L S V LN + +L L
Sbjct: 341 RVSFGKANPKDLLQLGHTLAQVPKIKGVLASFASPV-LDRLNEAIDALPELESLIASAID 399
Query: 373 ------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE-NSPQG 412
+ +D VM + ++ E A+ T+K++ N G
Sbjct: 400 QDAPATITEGGMIKTGFDQQLDHYRQVMREGTTWIAEIEAKERAASGISTLKIDYNRKDG 459
Query: 413 FAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVI 472
+ + +T + + D + T++ RF LA + + T + I V
Sbjct: 460 YYFHVTNSNLSLVPDHFFRKATLKNSERFGTAELAKIEGDMLEAREQSATLEYDIFMTVR 519
Query: 473 GISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIV 532
Y Q L L+ +A D L S ++ + YVRP + + RH +V
Sbjct: 520 NQVEKYIQRLQDLAKNIATVDTLQSLAVVAEY--NHYVRPQFNDQQV--IDIQDGRHAVV 575
Query: 533 E-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSAT 591
E + G YIPN + + L+TGPNM GKSTY+R + ++V +AQIG FV +SA
Sbjct: 576 EKVMGTQEYIPNTITLDQA-TAIQLITGPNMSGKSTYMRQLALTVVMAQIGSFVAAESAN 634
Query: 592 ISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFG 651
+ + D I+TR+GAAD G STFM+EM E I++ ++ SL++ DELGRGT+T+DG
Sbjct: 635 LPIFDAIYTRIGAADDLISGQSTFMVEMMEANMAIQRASKRSLILFDELGRGTATYDGMA 694
Query: 652 MACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGS 711
+A +I + TLFATH+HE+ LS + NV V+ LE++ ++ L+++ G
Sbjct: 695 LAQAIIEHIHDRVGAKTLFATHYHELTELSTTLTHLVNVHVATLEKDGDVTFLHKITDGP 754
Query: 712 CVKSYGVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTK-------TPSGDETNNREEE 761
KSYGVH AK+AG P D+L++A ++ + E SL ++ TP ET++++
Sbjct: 755 ADKSYGVHVAKIAGLPRDLLQRATSILTDLEAHSVSLTSQEKAEKLDTPVKQETSSQQMS 814
Query: 762 YFKTVQEGE 770
F+ + +
Sbjct: 815 LFEMTESND 823
>gi|375008283|ref|YP_004981916.1| DNA mismatch repair protein mutS [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287132|gb|AEV18816.1| DNA mismatch repair protein mutS [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 902
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 279/568 (49%), Gaps = 54/568 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D++ ++ +D+ Y+ M S LH+ + S SLL +LD T G RLL
Sbjct: 238 DHLQPAELYQVDH--YMKMDR--HSKLHLELVETVRSKGRKGSLLWLLDETVTAMGGRLL 293
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL D I R V L + R L + LRG+ D++ L R+ A +
Sbjct: 294 KQWLDRPLIDRREIERRLDFVETLKTSYFERQELRDR-LRGVYDIERLVGRVSYGNANAR 352
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL------------------- 372
D ++ + + Q+P L + +L EA L L + L
Sbjct: 353 DLVQLKKSLLQVPALRQTVGAL-PLAEADKLCERLDPCEELVDLLERSIQEQPPLSVKEG 411
Query: 373 --------KMMDR-KDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRITMKLNN 423
K +DR +DA + E A+ K++K+ + + F Y I + N
Sbjct: 412 NLIKDGYDKQLDRYRDASRNGKAWIAELEAKEREATGIKSLKVGYN-RVFGYYIEVTKPN 470
Query: 424 ---SIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
+ RY T+ RF ++ + ++I+ EYE +I E+V
Sbjct: 471 LPLVPEGRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFV-AIREQV---- 525
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-L 534
Y L L+ +A+ DVL SF A+ YVRP LV+ RHP+VE +
Sbjct: 526 KQYIPRLQTLAKAIAELDVLQSF--ATISDEYRYVRPQFSTERV--LVIQGGRHPVVEKV 581
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
G Y+PND Y E L+TGPNM GKSTY+R + ++ +AQIGCFVP + A + +
Sbjct: 582 LGAQMYVPNDCYMNR-EREMLLITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPI 640
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+GRGTST+DG +A
Sbjct: 641 FDQVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQ 700
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
+I + H TLF+TH+HE+ L R +P NV A+E+ +V L+Q+ G K
Sbjct: 701 AIIEYIHDHIGAKTLFSTHYHELTALERSLPRLSNVHARAIEENGKVVFLHQIADGPADK 760
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+H A++AG P ++E+AR ++ E E
Sbjct: 761 SYGIHVAELAGLPASLIERARAILAELE 788
>gi|15674192|ref|NP_268367.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp. lactis
Il1403]
gi|13878591|sp|Q9CDK9.1|MUTS_LACLA RecName: Full=DNA mismatch repair protein MutS
gi|12725276|gb|AAK06308.1|AE006450_1 mismatch repair protein MutS [Lactococcus lactis subsp. lactis
Il1403]
Length = 840
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 291/549 (53%), Gaps = 44/549 (8%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A SSL + + + + +L +LD +T G R+L W+ +PL AI
Sbjct: 247 FLQMDFATKSSLELTANKREN--KKHGTLYWLLDETKTAMGTRMLRSWIDRPLISNSAIQ 304
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V I +++ R +L E AL+G+ D++ LA R+ KA D ++ +S +P +
Sbjct: 305 KRMEIVQIFLDHFFERSDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAI 363
Query: 347 ISIL----ESLVQNV--------EASNL-NTILSSLQSLKMMDRK------DAVMDKMKE 387
IL E+ ++ + E S L N+ +S S + + +A +DK +E
Sbjct: 364 KYILGMLNEAPLEELKSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNAQLDKYRE 423
Query: 388 YLES-TARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
LE+ T+ L AD+ T++++ N G+ + IT NS+ + + T++
Sbjct: 424 ALENGTSWIAKLEADEKAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNS 483
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEV-IGI---SAGYTQTLNQLSDVLAQFDV 494
RF L T+ + I E S+ ++ +G+ + Y L L+ +A+ D
Sbjct: 484 ERFGSQEL----TEIEEIMLEAREKSSSLEYDLFMGLRTETEQYIGRLQALAKTIAEIDC 539
Query: 495 LVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVS 553
L S S+ + Y+RP + G+ + + RH +VE + G Y+PND+ +
Sbjct: 540 LQSLSV--VAEKQGYIRPTLTD-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QTD 595
Query: 554 FNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIS 613
L+TGPNM GKSTY+R ++V +AQIG FVP ++A + + D IFTR+GA+D+ G S
Sbjct: 596 IQLITGPNMSGKSTYMRQFALTVIMAQIGSFVPAETANLPIFDAIFTRIGASDNLISGES 655
Query: 614 TFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATH 673
TFM+EM E I+K + SL+I DELGRGT+T+DG +A +I + H TLFATH
Sbjct: 656 TFMVEMSEANHAIQKASSRSLIIFDELGRGTATYDGMALAQAIIEYVHDHIGAKTLFATH 715
Query: 674 FHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQ 733
+HE+ L + NV V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE+
Sbjct: 716 YHELTDLDEALDHLDNVHVATLEQNGNVTFLHKITEGPADKSYGIHVAKIAGLPQPLLER 775
Query: 734 ARDLMKEYE 742
A ++++ E
Sbjct: 776 ADLILQKLE 784
>gi|254167808|ref|ZP_04874658.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289597150|ref|YP_003483846.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623336|gb|EDY35901.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289534937|gb|ADD09284.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 828
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 195/675 (28%), Positives = 325/675 (48%), Gaps = 67/675 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G A +D+ T +F+ GE+ D+Y L A I++ P E L ++ D + KI+
Sbjct: 133 GFAALDISTGEFFAGEL---DFYG-LNAEILRLQPSEILSNSKLNLDFQIKILA------ 182
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR--FDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
E+ D ++++ F +EL + E L A L+ Y +
Sbjct: 183 -------------EEYYNDYEKILKEHFKVAELSGFGI-GEYGLRAAASALK----YAKE 224
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
D N S+ KY+ + S + +L + T L +++C TP G
Sbjct: 225 NTMNDLKNITSLQGYFKDKYLILDSTTLKNLEIFHNVLGEDKYT---LYHTMNKCETPMG 281
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL +WM++PLKD+D I +R AV L N + ++ R + D++ + R+ +
Sbjct: 282 ARLLKRWMQRPLKDIDEINDRLDAVEELANKQLLQDSIRTILSR-IKDIERIKTRVSLGR 340
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK-------------M 374
A +D + E + Q KL ES + AS + I ++ ++ +
Sbjct: 341 AAPRDLISLKESLKQADKLRINFESKILKNSASKIYGIEGIIELIENAINGDYPVGEGVI 400
Query: 375 MDRKDAVMDKMKEY----------LESTARRLNLVADKTIKLENSPQGFAYRITMKLNNS 424
+ + +D++K +E RR + + I N G+ ++ +
Sbjct: 401 KEGYNEELDEIKRIASNAKLLIGKMEERERRNTGIKNLKIGY-NDVMGYYIEVSKSNLSK 459
Query: 425 IDDRYTILDTVRGGVRFQDDRLATANTQ-YQAIQREYETHQQSIVEEVIGISAGYTQTLN 483
+ Y T++ RF D L + A R YE + I +++ +
Sbjct: 460 VPKHYRRKQTLKNSERFVTDELKELEYKILSAKDRIYEI-ENKIYRDILKKLGEMIDVIE 518
Query: 484 QLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPN 543
+ + +A DV+ S +A Y RP + + + + RHP+VEL ++PN
Sbjct: 519 RTAKSIAIIDVISS--LARVALEMNYTRPEVDE--SMDIEIRNGRHPVVELY--TDFVPN 572
Query: 544 DVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVG 603
D + S + F ++TGPNM GKSTY+R + + V LAQ+G FVP D A I +VD+I+TRVG
Sbjct: 573 DTHINS-DARFIILTGPNMAGKSTYMRQVALIVILAQMGSFVPADYAKIGIVDRIYTRVG 631
Query: 604 AADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASH 663
A+D RG STFMMEM E A ++ TE SL+++DE+GRGTST+DG +A SI + +
Sbjct: 632 ASDDITRGRSTFMMEMVELANILNTATERSLILLDEIGRGTSTYDGLAIAWSITEHIHNS 691
Query: 664 RQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKM 723
+ T+FATH+H + L V+ RN ++ E +D L+ + +V PG KSYG+ AK+
Sbjct: 692 IRARTIFATHYHHLIDLENVLDNVRNYHIAVKETQDGLIFVRKVMPGGMSKSYGIEVAKL 751
Query: 724 AGYPEDMLEQARDLM 738
AG PE ++++A++++
Sbjct: 752 AGVPEKVVKRAKEIL 766
>gi|423071724|ref|ZP_17060497.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0413]
gi|355363498|gb|EHG11235.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0413]
Length = 852
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 188/680 (27%), Positives = 333/680 (48%), Gaps = 83/680 (12%)
Query: 140 KIVTILDRNKVC-----------MTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE 188
++ T+ D N VC + G + E + L +N L+ ++ ++ +LL +
Sbjct: 151 QVTTLSDFNMVCGEIRNLRAREVVLGYELPEAEHQVLANQMNLLLSQVETAFEDVQLLGD 210
Query: 189 MCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS 248
L+ Y+ + + +H + ++ M A M+SL + + + +
Sbjct: 211 DLSRLEYQVAGKLLEYVHQTQLRELSHLKRVHHYEIKDFLQMDYATMTSLDL--TENART 268
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
+ + SL ++D +T G RLL +W++ PL D + I++R V + +++ R +L +
Sbjct: 269 GKKHGSLYWLMDETKTAMGTRLLRRWIQHPLLDKERILKRQDVVQVFLDHFFERSDLAD- 327
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEAS 360
+L+G+ D++ LA R+ K KD ++ +S +P++ IL+ L++N++
Sbjct: 328 SLKGVYDIERLASRVSFGKTNPKDLLQLAATLSNVPQIKGILQGIDHPVLGQLIENLD-- 385
Query: 361 NLNTILSSLQSLKMMDRK-------------DAVMDKMKEYLESTARRLNLVADK----- 402
++ + + +QS D D +DK + L + + K
Sbjct: 386 DIPELANLIQSAIYPDAPNVITEGNIIQTGFDETLDKYRVVLRDGTSWIADIEAKEKAAS 445
Query: 403 ---TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLA----------- 447
+K++ N G+ + +T + + T++ RF + LA
Sbjct: 446 GINNLKIDYNKKDGYYFHVTNSQLEHVPSHFFRKATLKNSERFGTEELARIEGEMLEARE 505
Query: 448 -TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+AN +Y+ R I EE + Y + L L+ LA DVL SF A+
Sbjct: 506 KSANLEYEIFIR--------IREE----AGKYIKRLQSLAQTLATVDVLQSF--AAVAEK 551
Query: 507 KPYVRP--CMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
+ +VRP +P S+ +++ RH +VE + G +YIPN + V+ L+TGPNM
Sbjct: 552 QHFVRPEFIERP----SIEIDKGRHAVVEKVMGAQTYIPNSISMDEN-VNLQLITGPNMS 606
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + + V +AQ+G +V + A + + D IFTR+GAAD G STFM+EM E
Sbjct: 607 GKSTYMRQLAIIVIMAQMGSYVSAERAQLPIFDAIFTRIGAADDLVSGQSTFMVEMMEAN 666
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
I + TE+SL++ DELGRGT+T+DG +A +I + + TLFATH+HE+ LS
Sbjct: 667 HAISQATEHSLILFDELGRGTATYDGMALAQAIIEYIHNRTGAKTLFATHYHELTDLSTS 726
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY 743
+ NV V+ +E++ + L++++ G KSYG+H A++AG P+D+L +A ++ E
Sbjct: 727 LTQLENVHVATVEKDGKVTFLHKIEAGPADKSYGIHVARIAGLPDDLLMRADQILARLEE 786
Query: 744 SLDTK---TPSGDETNNREE 760
+ K PS N+ +E
Sbjct: 787 QANEKPSLNPSNKGANDSKE 806
>gi|398835115|ref|ZP_10592492.1| DNA mismatch repair protein MutS [Herbaspirillum sp. YR522]
gi|398217306|gb|EJN03824.1| DNA mismatch repair protein MutS [Herbaspirillum sp. YR522]
Length = 912
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 270/536 (50%), Gaps = 48/536 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L LD CRT G RLL W+ L+D ERHAAVN L+ +A L L +
Sbjct: 324 TLFSTLDHCRTAMGSRLLRHWLHHALRDQSVARERHAAVNALMR-ADACSGL-SATLAAV 381
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTIL----SSL 369
PD++ + RI A +D + G+ QL L + +E ++ A L +L + +
Sbjct: 382 PDIERITTRIALLSARPRDLAGLRAGLQQLGSLRNYVEMCARDAAAPLLQALLEALATPV 441
Query: 370 QSLKMMDRK-------------------DAVMDKMKEYLEST--------ARRLNLVADK 402
+ L +++R DA +D+++ E+ AR
Sbjct: 442 ECLDLLERAIQLEPAALVRDGGVIARGYDAELDELRGLSENAGQFLLDLEARERERTGIA 501
Query: 403 TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+++E N GF +T + + D Y T++ R+ L + + Q
Sbjct: 502 NLRVEYNKVHGFYIEVTNGQTDKVPDDYRRRQTLKNAERYIIPELKAFEDKALSAQERSL 561
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST----CAPKPYVRPCMKPM 517
+ ++ + E+++ + L ++ AQ D LV+ + + CAP P
Sbjct: 562 SREKLLYEQLLAELGQHIPRLQSIAHATAQLDTLVALADHAARNNWCAPLLVSEP----- 616
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
S+ + Q RHP+VE Q +I ND S E L+TGPNMGGKSTY+R + +
Sbjct: 617 ---SIQIEQGRHPVVENQIE-RFIANDCQL-SAERKLLLITGPNMGGKSTYMRQVALITL 671
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA +G FVP SATI +D+IFTR+GAAD G STFM+EM E+A ++ +E+SLV++
Sbjct: 672 LAYVGSFVPASSATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNASEHSLVLM 731
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTSTFDG +A +IAR L + FTLFATH+ E+ L + P+ NV +SA+E
Sbjct: 732 DEVGRGTSTFDGLALAWAIARHLIDVTRSFTLFATHYFELTQLPEIHPSATNVHLSAVEH 791
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+D++V L+ V+ G +SYG+ A++AG P ++ AR + + E TP D
Sbjct: 792 KDSIVFLHAVQDGPASQSYGLQVAQLAGVPAAVIRAARRHLSQLENQSVQATPQFD 847
>gi|407795672|ref|ZP_11142630.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
gi|407020013|gb|EKE32727.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
Length = 845
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 267/528 (50%), Gaps = 45/528 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL ++D T G RLL +W+ +PL D I +R V ++N R E L +
Sbjct: 276 SLLSVIDSTVTAMGARLLKKWIDRPLLDESLIQKRQEIVQGFMDNFLYRDAFRE-DLTSV 334
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------ESLVQ 355
D++ LA R+ KD ++ + ++P ++S L E L Q
Sbjct: 335 YDLERLAGRVAFGNINAKDMLQLKRSLQKVPSILSSLSTLEVSVIQTFVQRMDPMEELAQ 394
Query: 356 NVEAS---------NLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKL 406
+E S I+ S S + + +DA ++ K + R L +++K+
Sbjct: 395 LLENSVHEDAKLTIREGNIIKSGYSESLDEYRDAQINGKKWIADLEKREKELTGIRSLKI 454
Query: 407 E-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQREY 460
+ N G+ +T + +RY T+ RF L T + ++I+ EY
Sbjct: 455 KYNKVFGYFIEVTRANLTHVPERYERKQTLANAERFITPELKEKETTILQAEEKSIELEY 514
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E + E+ + Y + QL+ +++ DVL FS A+ Y RP T
Sbjct: 515 E-----LFLEIRELVKDYVNKIQQLAKDISELDVLQGFSYAAEM--NGYERPSFSSKRTV 567
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LV RHP+VE ++PND+Y F L+TGPNM GKSTY+R + ++ +AQ
Sbjct: 568 HLV--NSRHPVVEKVMEDEFVPNDIYMDESTNIF-LITGPNMSGKSTYMRQMALTSVMAQ 624
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IG FVPC+ A + V DQIFTR+GAAD G STFM+EM E I T S+++ DE+
Sbjct: 625 IGSFVPCEEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEANNAITHATNRSMILFDEI 684
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST+DG +A SI + + + TLF+TH+HE+ L + + +NV V A E +
Sbjct: 685 GRGTSTYDGMALAQSIVEYIHENIKAKTLFSTHYHELTTLESELGSLKNVHVRAEEVDGK 744
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK 748
+V L+QVK G+ KSYG+H A++A P +++ +A L++E+E S DTK
Sbjct: 745 VVFLHQVKEGAADKSYGIHVAELAELPSEVITRAERLLEEFE-SHDTK 791
>gi|385816195|ref|YP_005852586.1| DNA mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325126232|gb|ADY85562.1| DNA mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 856
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 287/582 (49%), Gaps = 50/582 (8%)
Query: 197 CLRSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
+R L+ YL L + ++ + S + +Y+ M++ V +L + Q +T+ + SL
Sbjct: 223 AVRQLVVYL-LATQKRSLAHLQVAESFEIGQYLQMANTVQRNLEL--TQSATTGRKQGSL 279
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+LD+ T G RLL QW+ +PL LD I +R V L+++ R N+ + +L+G+ D
Sbjct: 280 FWVLDKTTTAMGGRLLKQWLSRPLLSLDRIKQRQQMVQALLDDYFTRENIVD-SLKGVYD 338
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL--------ESLVQNVEASN--LNTI 365
++ L+ R+ ++ ++ + + +I L E Q ++ + +I
Sbjct: 339 LERLSGRVAFGNVNPRELLQLAKSLEATKLIIQTLAESGNPDLEKYGQGIDPQSELAESI 398
Query: 366 LSSLQSLKMMDRKDAV---------MDKMKEYLESTARRL---NLVADKTIKLENSPQG- 412
+ L + KD +DK +E + + L + + ++N G
Sbjct: 399 TNCLVDQPPISAKDGGIIRAGVSEDLDKYREAMNGGKKWLAQMEMEERQRTGIDNLKIGY 458
Query: 413 ---FAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLAT-ANTQYQAIQR----EYE 461
F Y I + N DRYT T+ R+ L N +A R EYE
Sbjct: 459 NRVFGYFIQVSKGNVAKVPQDRYTRKQTLTNAERYITPELKEHENLILEAESRSTDLEYE 518
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q + E + + L +L LA DV V+F A K Y RP
Sbjct: 519 LFSQ--LREAV---KAHIPDLQELGRQLAALDVFVAF--AQDAEEKNYCRPSFS--SKNE 569
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+ + RHP+VE + SYIPND+ + S L+TGPNM GKSTY+R + + +AQ
Sbjct: 570 IAVKNGRHPVVEAVLPASSYIPNDLVMDE-DTSIYLITGPNMSGKSTYMRQLALIAIMAQ 628
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IG FVP DSA + V DQIFTR+GAAD Y G STFM+EM E ++ + SLV+ DE+
Sbjct: 629 IGSFVPADSAKLPVFDQIFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDEI 688
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + L TLFATH+HE+ L + +N+ V A E+
Sbjct: 689 GRGTATYDGMALAGAIIKYLHDKVGAKTLFATHYHELTELDETLLHLKNIHVGATEENGK 748
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L+++ PG +SYG+H AK+AG P +L +A ++K E
Sbjct: 749 LIFLHKILPGPADQSYGIHVAKLAGLPRAVLREASSMLKRLE 790
>gi|433654964|ref|YP_007298672.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293153|gb|AGB18975.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 857
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 187/704 (26%), Positives = 347/704 (49%), Gaps = 82/704 (11%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G++ VD+ T ++ +I D + I++ +P E + ++ + K+V +++
Sbjct: 134 NNYGLSFVDVMTGDLFVTQIIKCDDIRKIYDEIMRYNPSEIIANNDFFS--LKKLVRVIN 191
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLV--RFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+K+ + + N QD R++ +F+ S L E+ L + ++SL
Sbjct: 192 SSKIYINKYENN-------YQDFERIISNQFNKS-------LNELGLEGKNYAIKSLTTV 237
Query: 205 LELMNNEDNMNQFSIHSIDY---SKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
L + + ++++ Y + ++ + + + +L ++ +++ +LL +LD+
Sbjct: 238 LIYLKELQKVQLSQLNNLTYYEDNSFMLLDNNTIKNLEIVQSPNRNNSRD-GTLLSVLDQ 296
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
TP G RLL +W+++PL D++ I R +V+ L N+ + R +L AL+G+ D++ L+
Sbjct: 297 TVTPMGGRLLKRWIEEPLIDIEKINLRLDSVDELFNDFKGRSDLRN-ALKGIYDLERLSS 355
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRKDAV 381
++ + KD + + +LPK+ + L+ + L I L +L+ D D +
Sbjct: 356 KLVYQNINAKDLLSIKVSIERLPKI----KDLISKYNSIYLKEIFLKLDTLQ--DICDLI 409
Query: 382 MDKMKEYLESTARRLNLVAD---------------------------------KTIKLE- 407
+K+ ++ + N++ D KT+K+
Sbjct: 410 EKSIKDDPSTSVKEGNIIKDGFDKNVDELRKAATNGKSWITNLELNEKERTGIKTLKVGY 469
Query: 408 NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQ-------DDRLATANTQYQAIQREY 460
N G+ ++ +S+ Y T+ R+ ++++ A T+ ++ EY
Sbjct: 470 NKVFGYFIEVSKSYISSVPQNYIRKQTLANAERYITPELKEIEEKILGAETKL--VELEY 527
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E SI E++ + S +A DVL S +A YV+P +
Sbjct: 528 EIFN-SIREQI----KNEINRIQMTSKYIAVLDVLTS--LAMVAESNNYVKPIVN--DGD 578
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+++ RHP++E S+I ND+ + ++TGPNM GKSTY+R + + V +AQ
Sbjct: 579 RILIKDGRHPVIETIVDDSFISNDIEIDEKK-PIMIITGPNMAGKSTYMRQVALIVLMAQ 637
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVP A I +VD+IFTRVGA+D + G STFM+EM E + ++ T+ SL+I+DE+
Sbjct: 638 VGSFVPASYAEIGIVDRIFTRVGASDDLFSGQSTFMVEMNEVSVILNSATQKSLIILDEV 697
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST+DG +AC+I + + T+FATH+HE+ L + +N +S E D
Sbjct: 698 GRGTSTYDGMSIACAILEYIHDKIKAKTMFATHYHELTKLEDQLNGIKNYNISVDETNDE 757
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
++ L ++ PGS KSYG+ AK+AG P D+++ A+ ++ E S
Sbjct: 758 IIFLRKIIPGSADKSYGIQVAKLAGLPNDVIDNAKKILNSLENS 801
>gi|325680315|ref|ZP_08159875.1| DNA mismatch repair protein MutS [Ruminococcus albus 8]
gi|324108024|gb|EGC02280.1| DNA mismatch repair protein MutS [Ruminococcus albus 8]
Length = 871
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 273/522 (52%), Gaps = 36/522 (6%)
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
Q SLL ++ +T G+R+L W++QPL + I++R AV LV + A + E
Sbjct: 297 QKKGSLLWVISNTKTSMGNRMLKSWLEQPLINPAKIIDRLNAVEQLVRDPVALGEIKE-V 355
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL------------------ISILE 351
L G+ D++ L R+ K A +D + +LP L IS L+
Sbjct: 356 LGGVYDLERLMTRVMYKSASPRDIKSLSLTALKLPDLKKQLSAFDGKLLKDCNRRISTLD 415
Query: 352 SLVQNVEASNLNTILSSLQSLKMM-DRKDAVMDKMKEYLESTARRLNLVAD--------K 402
++ VE + ++ ++++ ++ D + +D ++ + ++ +A+ K
Sbjct: 416 AISNLVENALVDEPPANVKDGGVIRDGFNEQLDGLRNIISGGKGIIDDIAEREKEKTGIK 475
Query: 403 TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
T+K+ N G+ +T + I D Y T+ RF D L A +
Sbjct: 476 TLKIGYNRVFGYYIEVTKSYYDLIPDNYIRKQTLTNCERFITDELKVAENTILGASDKIL 535
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
+ +Q I EV A + + + +A+ DVL S++ A+ Y +P + G
Sbjct: 536 SLEQEIFTEVRDFIATQLRIVQDTATAVAEVDVLCSYATAAI--KNNYTKPEIAI--DGI 591
Query: 522 LVLNQCRHPIVEL-QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+ + RHP+VEL Q ++PND Y G +++TGPNM GKSTY+R + + +AQ
Sbjct: 592 INIKNGRHPVVELMQTDEVFVPNDTYLDLGSNRMSVITGPNMSGKSTYMRQVALITLMAQ 651
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IGCFVP D A ISVVDQIFTR+GA+D G STFM+EM E A ++K T++SLVI+DE+
Sbjct: 652 IGCFVPADYAKISVVDQIFTRIGASDDLTAGQSTFMVEMSEVADIVKHATKDSLVILDEV 711
Query: 641 GRGTSTFDGFGMACSIARELASHRQPF--TLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
GRGTSTFDG +A S++ +++ R TLFATH+HE+ L + +N V+ Q
Sbjct: 712 GRGTSTFDGIAIARSVSEYISTSRSLGCKTLFATHYHELISLEDELTGVKNYSVAVKRQG 771
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
DN+ L ++ PG +SYG+ AK+AG P ++ +A+ L+ E
Sbjct: 772 DNIKFLRKIVPGGADESYGIEVAKLAGLPSKIIGRAKSLLGE 813
>gi|420145752|ref|ZP_14653206.1| DNA mismatch repair protein MutS [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402601|gb|EJN55922.1| DNA mismatch repair protein MutS [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 881
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 265/525 (50%), Gaps = 36/525 (6%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ Q +LL +LD +T G RLL QW+ +PL + I +R V L+++ R +L +
Sbjct: 273 TGQRSGTLLWLLDATKTAMGGRLLKQWLDRPLINAMQIKQRQDKVASLMDHFFERSSLQD 332
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-------------- 353
L + D++ LA R+ +D ++ + Q+PKL +IL +
Sbjct: 333 -ELTKVYDLERLAGRVAFGNVNGRDLIQLKTSLLQIPKLKAILTDINDGTFDDVIDHLDP 391
Query: 354 ---VQNVEASNLN----------TILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVA 400
V ++ +N ++ + ++ D +DA+ + + E A+
Sbjct: 392 VSDVADLIDRAINDEPPLSIKDGNVIKPHYNQQLDDYRDAMKNGKQWIAELQAKERAATG 451
Query: 401 DKTIKLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
T+K+ N G+ +T L +DRY T+ RF L T Q
Sbjct: 452 IHTLKIGFNRVFGYYIEVTKANLAALPEDRYERKQTLTNAERFSTPELKEKETLILEAQE 511
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ + + V L +L+ +A DVL SF++ S YVRP +
Sbjct: 512 KSTALEYDLFTAVREQVKQQIHRLQRLAKGVAALDVLQSFAVVSET--YHYVRPTLTKAH 569
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+V RHP+VE + G YIPNDV + L+TGPNM GKSTY+R + ++V
Sbjct: 570 DLEIVAG--RHPVVEKVLGEQKYIPNDVTMDADNTIL-LITGPNMSGKSTYMRQLALTVI 626
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQIGCF+P AT+ + DQIFTR+GAAD G STFM+EM E+ T + TENSL++
Sbjct: 627 MAQIGCFIPATKATLPIFDQIFTRIGAADDLISGQSTFMVEMMESNTALAHATENSLILF 686
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGT+T+DG +A +I L H TLF+TH+HE+ L +P RNV V A+E+
Sbjct: 687 DEIGRGTATYDGMALAQAIIEYLHDHVHAKTLFSTHYHELTALDTDLPHLRNVHVGAVEE 746
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LV L+++ G+ KSYG+H AK+AG P+ +L +A ++ E
Sbjct: 747 NGTLVFLHKMMAGAADKSYGIHVAKLAGLPDSLLTRATTILAGLE 791
>gi|406909772|gb|EKD49954.1| hypothetical protein ACD_63C00001G0002 [uncultured bacterium]
Length = 830
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 203/712 (28%), Positives = 364/712 (51%), Gaps = 77/712 (10%)
Query: 73 CVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAE 132
+++ED+ E VG+A+ D+ T +F E D S+L+ + + +P+ECL+P +
Sbjct: 123 VIVAEDRNSEQY---KVGIAVSDVSTGEFRGTEFFDAKKLSSLKNELTKLNPRECLIPKD 179
Query: 133 YLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNR-LVR--FDDSELKNARLLPEM 189
+ IL+ K C+ G + + + ++ + +R FD L+ + E
Sbjct: 180 LYKN-----FGILEALK-CVDGMNIYPYEDWNFEKETAKDFLRSHFDVESLEGFGIKDE- 232
Query: 190 CLTTATHCLRSLINYLELMNNE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGST 247
A +L++YL +++++F+++SID + + + A + +L ++
Sbjct: 233 --ELAIGSAGALLSYLRETQKTKLNHISKFNLYSID--ERMILDDATLRNLELVSTL--R 286
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + ++LL +LD T G RLL + PL +++ I R +V + R + E
Sbjct: 287 SGEKKNTLLWVLDDTLTSMGGRLLRNSVLSPLINVEKIKNRLDSVEEFCKDNILREEVGE 346
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
L+ + D++ LA +IG A +D + + + +P L SIL +NV++ L + +
Sbjct: 347 -KLKEVSDLERLAGKIGCMSANARDLLALKDSLKIIPALKSIL----KNVDSKRLIFLKN 401
Query: 368 SLQSLK----MMDRK-------------------DAVMDKMK-------EYLESTARRLN 397
+L +K ++++ DA +DK+K E++++ R+ +
Sbjct: 402 NLNEIKEVVDLIEKSVDESSPVTLKDGNLIKKGYDAKLDKIKDAAISGKEWIKTLQRKES 461
Query: 398 LVAD-KTIKLENSPQGFAYRITMKLNN--SIDDRYTILDTVRGGVRFQDDRLATA----- 449
A ++K++ + + F Y I + N + Y T+ RF L
Sbjct: 462 ARAKIPSLKVKFN-RVFGYYIEVSKTNLSQVPSDYIRKQTLVNAERFITPELKEKEDLIL 520
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
N + + I+ E+ I E+ + Y + + +++ +LA+ D+L +F A Y
Sbjct: 521 NAEERMIELEFR-----IFVEIRDKVSEYIKDIQKVAKILAELDLLSNF--ARIAINNNY 573
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTY 568
+P K L + + RHP+VE ++ S++PNDV + ++TGPNM GKSTY
Sbjct: 574 TKP--KVDTDDGLEIKEGRHPVVERIKSAGSFVPNDVSLDNKNCQLIVLTGPNMSGKSTY 631
Query: 569 IRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKK 628
IR + +AQIG FVP I VVD+IFTRVGA+D+ RG STFM+EM+ETA ++
Sbjct: 632 IRQNALITLMAQIGSFVPAAFVKIGVVDRIFTRVGASDALTRGQSTFMVEMQETANILNN 691
Query: 629 CTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPT 686
T SL+I+DE+GRGTSTFDG +A ++A + S + TLFATH+HE+ L +++P
Sbjct: 692 ATSRSLIILDEIGRGTSTFDGVSIAWAVAEYIVSKEKLGAKTLFATHYHELLELEKILPR 751
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLM 738
+N V+ E +D ++ LY++ G +SYG++ K+AG P++++ +A D++
Sbjct: 752 VKNFNVAVKESKDKVIFLYKILRGGTNRSYGIYVGKLAGLPKEVVRRAEDVL 803
>gi|417002251|ref|ZP_11941640.1| DNA mismatch repair protein MutS [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479392|gb|EGC82488.1| DNA mismatch repair protein MutS [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 868
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 306/580 (52%), Gaps = 54/580 (9%)
Query: 197 CLRSLINYLELMNNEDNMNQFS-IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
L +LI+Y+ ++DN+ + I ++ + Y+ + ++ +L + + + + +SL
Sbjct: 242 SLANLIDYI-YKYHKDNLTHINNIEILEINNYMQLEASTRKNLELHRNLNNNTKE--NSL 298
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
L ILD+ T G R++ +++++PL D I +R V L+N++ N+ Y L + D
Sbjct: 299 LSILDKADTVMGSRMINEYLERPLIDKVQIEKRLDIVETLLNDSILSTNISNY-LSDIYD 357
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-VQNVEASNLNT----ILSSLQ 370
++ L +I K+A +D + + +PKL IL + QN++ +N + L
Sbjct: 358 LERLVAKISYKRANARDLISIKNSIYNIPKLKEILVNHDDQNIKNIGINIPDIDFIYDLI 417
Query: 371 SLKM------------MDRK--DAVMDKMKEYLESTARRLNLVADKTIKLENSPQ----- 411
+ + M RK D +D++KE L S+A+ K I+ ENS +
Sbjct: 418 DISIVSDPPIAITEGGMIRKGYDKSLDELKE-LSSSAQS------KLIEYENSEKKATGI 470
Query: 412 -----------GFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
G++ IT + + Y T++ R+ + L + + +
Sbjct: 471 KNYKIVYNKNNGYSIEITKSNLDKVPSSYVRKQTLKNQERYTTETLEEISELILGGKDKI 530
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ I ++V T L L+ ++A D L +F A YVRP ++ T
Sbjct: 531 NNLEYEIFKKVRDEILKNTIKLQALAKMIANIDTLNTF--AKIARDNAYVRPEIR---TD 585
Query: 521 SLV-LNQCRHPIVELQ-GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+L+ + RHP++E +IPND + ++TGPNM GKSTY+R + + + L
Sbjct: 586 NLIKIKDSRHPVIENNLNENEFIPNDTDIGEDDNLIQIITGPNMAGKSTYMRQMAIIIIL 645
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQ+G FVP SA IS+ DQ+FTR+GA+D+ +G STFM+EM E ++++K TENS VI+D
Sbjct: 646 AQMGSFVPATSAQISICDQVFTRIGASDNISKGESTFMLEMNEVSSILKNSTENSFVILD 705
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
E+GRGTS+ DG +A +I L+ ++ T+FATHFHE+ ++ + +N+++ LE+
Sbjct: 706 EVGRGTSSDDGLSIAMAIVEYLSKKKKVKTVFATHFHELTIMENELDNVKNLKIEILEEN 765
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLM 738
+NLV L ++K G +SYG+ AK++G P++++E A+ +M
Sbjct: 766 NNLVFLRKIKKGKSDRSYGIEVAKLSGLPDEVIENAKLIM 805
>gi|392429508|ref|YP_006470522.1| DNA mismatch repair protein HexA [Streptococcus intermedius JTH08]
gi|419776877|ref|ZP_14302796.1| DNA mismatch repair protein MutS [Streptococcus intermedius SK54]
gi|383845562|gb|EID82965.1| DNA mismatch repair protein MutS [Streptococcus intermedius SK54]
gi|391758657|dbj|BAM24274.1| DNA mismatch repair protein HexA [Streptococcus intermedius JTH08]
Length = 852
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 188/680 (27%), Positives = 333/680 (48%), Gaps = 83/680 (12%)
Query: 140 KIVTILDRNKVC-----------MTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE 188
++ T+ D N VC + G + E + L +N L+ ++ ++ +LL +
Sbjct: 151 QVTTLSDFNMVCGEIRNLRAREVVLGYELPEAEHQVLANQMNLLLSQVETAFEDVQLLGD 210
Query: 189 MCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS 248
L+ Y+ + + +H + ++ M A M+SL + + + +
Sbjct: 211 DLSRLEYQVAGKLLEYVHQTQLRELSHLKQVHHYEIKDFLQMDYATMTSLDL--TENART 268
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
+ + SL ++D +T G RLL +W++ PL D + I++R V + +++ R +L +
Sbjct: 269 GKKHGSLYWLMDETKTAMGTRLLRRWIQHPLLDKERILKRQDVVQVFLDHFFERSDLAD- 327
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEAS 360
+L+G+ D++ LA R+ K KD ++ +S +P++ IL+ L++N++
Sbjct: 328 SLKGVYDIERLASRVSFGKTNPKDLLQLAATLSNVPQIKGILQGIDHPVLGQLIENLD-- 385
Query: 361 NLNTILSSLQSLKMMDRK-------------DAVMDKMKEYLESTARRLNLVADK----- 402
++ + + +QS D D +DK + L + + K
Sbjct: 386 DIPELANLIQSAISPDAPNVITEGNIIQTGFDETLDKYRVVLRDGTSWIADIEAKERVAS 445
Query: 403 ---TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLA----------- 447
+K++ N G+ + +T + + T++ RF + LA
Sbjct: 446 GINNLKIDYNKKDGYYFHVTNSQLEHVPSHFFRKATLKNSERFGTEELARIEGEMLEARE 505
Query: 448 -TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+AN +Y+ R I EE + Y + L L+ LA DVL SF A+
Sbjct: 506 KSANLEYEIFIR--------IREE----AGKYIKRLQSLAQTLATVDVLQSF--AAVAEK 551
Query: 507 KPYVRP--CMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
+ +VRP +P S+ +++ RH +VE + G +YIPN + V+ L+TGPNM
Sbjct: 552 QRFVRPEFIERP----SIEIDKGRHAVVEKVMGAQTYIPNSISMDEN-VNLQLITGPNMS 606
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + + V +AQ+G +V + A + + D IFTR+GAAD G STFM+EM E
Sbjct: 607 GKSTYMRQLAIIVIMAQMGSYVSAERAQLPIFDAIFTRIGAADDLVSGQSTFMVEMMEAN 666
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
I + TE+SL++ DELGRGT+T+DG +A +I + + TLFATH+HE+ LS
Sbjct: 667 HAISQATEHSLILFDELGRGTATYDGMALAQAIIEYIHNRTGAKTLFATHYHELTDLSTS 726
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY 743
+ NV V+ +E++ + L++++ G KSYG+H A++AG P+D+L +A ++ E
Sbjct: 727 LTQLENVHVATVEKDGKVTFLHKIEAGPADKSYGIHVARIAGLPDDLLMRADQILARLEE 786
Query: 744 SLDTK---TPSGDETNNREE 760
+ K PS N+ +E
Sbjct: 787 QANEKPSLNPSNKGANDSKE 806
>gi|406026843|ref|YP_006725675.1| DNA mismatch repair protein mutS [Lactobacillus buchneri CD034]
gi|405125332|gb|AFS00093.1| DNA mismatch repair protein mutS [Lactobacillus buchneri CD034]
Length = 862
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 267/524 (50%), Gaps = 38/524 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD+ +T G R L QW+++PL + I +RH AV +L+++ R L + ++ +
Sbjct: 279 TLLWLLDQTKTAMGGRKLKQWIERPLVNRKLINQRHDAVAVLLDHYFERNQLQDELIK-V 337
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK 373
D++ LA RI +D ++ + Q+PK+ ILE + + L ++ +
Sbjct: 338 YDLERLAGRISFGSVNGRDLIQLKASLKQVPKIKYILEQIADKSFEAMLKNLVPLDDVVD 397
Query: 374 MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTIKLENSPQ 411
+D KD ++ Y ++T +A+ K + N
Sbjct: 398 EIDSAIVEEPPISVTDGGVIKDGYNQQLDTYRDATNNGQKWLAELEAKERKITGINNLKV 457
Query: 412 GF----AYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
GF Y I + L+ +RY T+ RF L Q + +T +
Sbjct: 458 GFNHVFGYYIEVTKVNLDKIPANRYQRKQTLANAERFSTPELKEKEALILEAQEQSKTLE 517
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV- 523
+ ++ + + L+D +A DVL SF A+ +VRP + T +V
Sbjct: 518 YKLFVKIRDDIKKSIKRIQDLADAVASIDVLQSF--AAVSEEYRFVRPTLT---THHVVE 572
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
+ RHP+VE + G Y+PNDV + S L+TGPNM GKSTY+R + + V + Q+G
Sbjct: 573 VKDGRHPVVEKVLGHQQYVPNDVNLGE-DTSILLITGPNMSGKSTYMRQMALCVIMNQMG 631
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVP A + V D+IFTR+GAAD G STFM+EMKE I+ T NSL++ DE+GR
Sbjct: 632 CFVPAKQAKLPVFDKIFTRIGAADDLISGQSTFMVEMKEANDAIENATPNSLILFDEIGR 691
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + ++ TLF+TH+HE+ +L + +NV V A E LV
Sbjct: 692 GTATYDGMALAQAIIEYVHNNIGAKTLFSTHYHELTVLDESLKRLQNVHVGATESNGELV 751
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
L++++PG KSYG+H AK+AG PE +L +A D++ E D
Sbjct: 752 FLHKIQPGPADKSYGIHVAKLAGLPEGLLHRANDILTNLEQQAD 795
>gi|433463731|ref|ZP_20421273.1| DNA mismatch repair protein MutS [Halobacillus sp. BAB-2008]
gi|432187173|gb|ELK44500.1| DNA mismatch repair protein MutS [Halobacillus sp. BAB-2008]
Length = 863
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 181/602 (30%), Positives = 297/602 (49%), Gaps = 60/602 (9%)
Query: 201 LINYLELMNNE--DNMNQFSIHSIDYSKYVHM---SSAVMSSLHVLPQQGSTSAQTYDSL 255
L+NY++ D++ I I+ +Y+ + S + L + +QG SL
Sbjct: 227 LLNYIQHTQKRALDHLQPLQI--IELKQYMTLDMYSKRNLELLETIRKQGKAG-----SL 279
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
L ++D+ T G R+L +WM++PL DAI +RH V ++ R L + L + D
Sbjct: 280 LSVVDKTITSMGARMLKKWMERPLLSADAIADRHDQVEGFLDQFIERETLRD-ELTNVYD 338
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMM 375
++ LA R+ +D ++ + ++P ++S L L + L+ L+ +
Sbjct: 339 LERLAGRVAYGNVNARDLIQLRNSLQKIPDILSTLSRFTHG-SIHRLYEKIDPLKDLRHL 397
Query: 376 DRKDAVMD-----------------KMKEYLESTARRLNLVAD-----------KTIKLE 407
+ D ++ Y +++ +A+ K++K+
Sbjct: 398 LEESIAEDPPIAVKEGGIIRSGFHEQLDAYRDASKNGKQWIAELEQRERKESGIKSLKIG 457
Query: 408 -NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQREY 460
N G+ +T L + +Y T+ RF L T Q ++++ EY
Sbjct: 458 YNRVFGYYIEVTKANLKFLPEGKYERKQTLTNAERFITPELKEKETMILEAQEKSVELEY 517
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E + I +EV Y Q L L++ +++ DVL F A YVRP +
Sbjct: 518 ELFLK-IRDEV----KFYVQKLQHLAEQISRIDVLQGF--AQVAESSQYVRPTYRQERI- 569
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
+ + + RHP+VE + +++PND+Y E L+TGPNM GKSTY+R + ++ +
Sbjct: 570 -VDIREGRHPVVEQVMKDSTFVPNDIYMDE-ETDVLLITGPNMSGKSTYMRQLALTAIMG 627
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVPC SA + + DQIFTR+GAAD G STFM+EM E I TENS++++DE
Sbjct: 628 QMGCFVPCSSAVMPIFDQIFTRIGAADDLVSGHSTFMVEMLEANHAISHATENSMILLDE 687
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGTST+DG +A +I + + TLF+TH+HE+ L + +NV V A E E
Sbjct: 688 IGRGTSTYDGMALAQAIVEYIHHDIKAKTLFSTHYHELTSLENPLKRLKNVHVRAEEYEG 747
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNRE 759
N++ L+Q+K G +SYG+H AK+A PE ++ +A +L+ + E T+ PS E
Sbjct: 748 NVIFLHQIKEGPADESYGIHVAKLANLPEPLIGRATELLHQLENGSHTEEPSSVEAAASL 807
Query: 760 EE 761
EE
Sbjct: 808 EE 809
>gi|424788684|ref|ZP_18215434.1| DNA mismatch repair protein MutS [Streptococcus intermedius BA1]
gi|422112464|gb|EKU16251.1| DNA mismatch repair protein MutS [Streptococcus intermedius BA1]
Length = 852
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 189/680 (27%), Positives = 332/680 (48%), Gaps = 83/680 (12%)
Query: 140 KIVTILDRNKVC-----------MTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPE 188
++ T+ D N VC + G + E + L +N L+ ++ ++ +LL +
Sbjct: 151 QVTTLSDFNMVCGEIRNLRAREVVLGYELPEAEHQVLANQMNLLLSQVETAFEDVQLLGD 210
Query: 189 MCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS 248
L+ Y+ + + +H + ++ M A M+SL + + + +
Sbjct: 211 ELSRLEYQVAGKLLEYVHQTQLRELSHLKRVHHYEIKDFLQMDYATMTSLDL--TENART 268
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
+ + SL ++D +T G RLL +W++ PL D + I++R V + +++ R +L +
Sbjct: 269 GKKHGSLYWLMDETKTAMGTRLLRRWIQHPLLDKERILKRQDVVQVFLDHFFERSDLAD- 327
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES--------LVQNVEAS 360
+L+G+ D++ LA R+ K KD ++ +S +P++ IL+ L++N++
Sbjct: 328 SLKGVYDIERLASRVSFGKTNPKDLLQLAATLSNVPQIKGILQGIDHPVLGQLIENLD-- 385
Query: 361 NLNTILSSLQSLKMMDRK-------------DAVMDKMKEYLESTARRLNLVADK----- 402
++ + + +QS D D +DK + L + + K
Sbjct: 386 DIPELANLIQSAISPDAPNVITEGNIIQTGFDETLDKYRVVLRDGTSWIADIEAKEKAAS 445
Query: 403 ---TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLA----------- 447
+K++ N G+ + +T + + T++ RF + LA
Sbjct: 446 GINNLKIDYNKKDGYYFHVTNSQLEYVPSHFFRKATLKNSERFGTEELARIEGEMLEARE 505
Query: 448 -TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+AN +Y+ R I EE + Y + L L+ LA DVL SF A+
Sbjct: 506 KSANLEYEIFIR--------IREE----AGKYIKRLQSLAQTLATVDVLQSF--AAVAEK 551
Query: 507 KPYVRP--CMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
+ +VRP +P S+ +++ RH +VE + G +YIPN + V+ L+TGPNM
Sbjct: 552 QRFVRPEFIERP----SIEIDKGRHAVVEKVMGAQTYIPNSISMDEN-VNLQLITGPNMS 606
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + + V +AQ+G +V + A + + D IFTR+GAAD G STFM+EM E
Sbjct: 607 GKSTYMRQLAIIVIMAQMGSYVSAERAQLPIFDAIFTRIGAADDLVSGQSTFMVEMMEAN 666
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
I + TE+SL++ DELGRGT+T+DG +A +I + + TLFATH+HE+ LS
Sbjct: 667 HAISQATEHSLILFDELGRGTATYDGMALAQAIIEYIHNRTGAKTLFATHYHELTDLSTS 726
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY 743
+ NV V+ LE++ + L++++ G KSYG+H A++AG P D+L +A ++ E
Sbjct: 727 LKQLENVHVATLEKDGQVTFLHKIEAGPADKSYGIHVARIAGLPNDLLMRADQILARLEE 786
Query: 744 SLDTK---TPSGDETNNREE 760
+ K PS N+ +E
Sbjct: 787 QANEKPSLNPSNKGANDSKE 806
>gi|418029374|ref|ZP_12667917.1| hypothetical protein LDBUL1632_00711 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690049|gb|EHE90006.1| hypothetical protein LDBUL1632_00711 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 856
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 289/583 (49%), Gaps = 52/583 (8%)
Query: 197 CLRSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
+R L+ YL L + ++ + S + +Y+ M++ V +L + Q +T+ + SL
Sbjct: 223 AVRQLVVYL-LATQKRSLAHLQVAESFEIGQYLQMANTVQRNLEL--TQSATTGRKQGSL 279
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+LD+ T G RLL QW+ +PL LD I +R V L+++ R N+ + +L+G+ D
Sbjct: 280 FWVLDKTTTAMGGRLLKQWLSRPLLSLDRIKQRQQMVQALLDDYFTRENIVD-SLKGVYD 338
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL--------ESLVQNVEASN--LNTI 365
++ L+ R+ ++ ++ + + +I L E Q ++ + +I
Sbjct: 339 LERLSGRVAFGNVNPRELLQLAKSLEATKLIIQTLAESGNPDLEKYGQGIDPQSELAESI 398
Query: 366 LSSLQSLKMMDRKDAV---------MDKMKEYLESTAR---RLNLVADKTIKLENSPQG- 412
+ L + KD +DK +E + + ++ + + ++N G
Sbjct: 399 TNCLVDQPPISAKDGGIIRAGVSEDLDKYREAMNGGKKWLAQMEMEERQRTGIDNLKIGY 458
Query: 413 ---FAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLAT-ANTQYQAIQR----EYE 461
F Y I + N DRYT T+ R+ L N +A R EYE
Sbjct: 459 NRVFGYFIQVSKGNVAKVPQDRYTRKQTLTNAERYITPELKEHENLILEAESRSTDLEYE 518
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q + E + + L +L LA DV V+F A K Y RP
Sbjct: 519 LFSQ--LREAV---KAHIPDLQELGRQLAALDVFVAF--AQDAEEKNYCRPSFS--SKNE 569
Query: 522 LVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
+ + RHP+VE L G SYIPND+ + S L+TGPNM GKSTY+R + + +A
Sbjct: 570 IAVKNGRHPVVEAVLPDG-SYIPNDLVMDE-DTSIYLITGPNMSGKSTYMRQLALIAIMA 627
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
QIG FVP DSA + V DQ+FTR+GAAD Y G STFM+EM E ++ + SLV+ DE
Sbjct: 628 QIGSFVPADSAKLPVFDQVFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDE 687
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+T+DG +A +I + L TLFATH+HE+ L + +N+ V A E+
Sbjct: 688 IGRGTATYDGMALAGAIIKYLHDKVGAKTLFATHYHELTELDETLLHLKNIHVGATEENG 747
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L+++ PG +SYG+H AK+AG P +L +A ++K E
Sbjct: 748 KLIFLHKILPGPADQSYGIHVAKLAGLPRAVLREASSMLKRLE 790
>gi|222529489|ref|YP_002573371.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
gi|254766611|sp|B9MJU0.1|MUTS_ANATD RecName: Full=DNA mismatch repair protein MutS
gi|222456336|gb|ACM60598.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
Length = 863
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 207/711 (29%), Positives = 332/711 (46%), Gaps = 104/711 (14%)
Query: 119 IVQKSPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFS----------------E 162
IV++ + P +++DN I T N +C + ++EF+ E
Sbjct: 99 IVKREITRIITPGTFIDDN---ISTA--NNFICCISKDRSEFALTFVDVSTGEMYSCLLE 153
Query: 163 EDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHC--LRSLINYLELMN-NEDNMNQFSI 219
EDL + VN + ++ SE+ + + E+ +C +I +++L +E NQ ++
Sbjct: 154 EDLQKLVNEIGKYSPSEILISNIEDELYEFLKKNCTSFVQMIEFVDLQKCHEIIENQINV 213
Query: 220 HSIDYS---------KYVHMSSAVMSSLHVLPQQGSTSAQTY------------------ 252
ID KY+ + + S + + Q Y
Sbjct: 214 GKIDEKLILSVGNLLKYLTETQKI--SFDYIRRFEFYRVQNYLQIDINTKRNLELTESII 271
Query: 253 -----DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+SLLGILD+ +T G RLL +W+++PL D+ I +R +V L +N + + E
Sbjct: 272 QRSRKNSLLGILDQTKTSMGSRLLKKWIERPLIDIIEINKRLDSVEELKSNYSTLVQVEE 331
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
R + D++ L+ + K KD + + + LP L L S ++ L I
Sbjct: 332 LLSR-MYDIERLSSKFAYKNVNAKDLLSLKKSIEVLPTLKQFLSSF----DSELLKEIYE 386
Query: 368 SLQSLK------------------------------MMDRKDAVMDKMKEYL-ESTARRL 396
L +L+ +DR + KE L E +
Sbjct: 387 GLDTLEDIYALIDSSINEDAPVSLKEGGIIKEGFNEEVDRLRNISKNSKELLVEYEEKER 446
Query: 397 NLVADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQ-YQ 454
NL K +++ N G+ +T + + DRY T+ R+ + L +
Sbjct: 447 NLTGIKNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLANAERYITEELKKLEDEILG 506
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
A Q+ E Q E I A + S++ A DVL SF A YVRP +
Sbjct: 507 ADQKLIELEYQLFCEIRDRIEAQIERIQKTASNI-ANLDVLCSF--ARIAIDNEYVRPNV 563
Query: 515 KPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
+G + + RHP+VE + G ++IPND E ++TGPNM GKSTY+R +
Sbjct: 564 Y-LG-DRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGPNMAGKSTYMRQVA 621
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
+ V +AQ+GCFVP D A I VVD+IF+R+GA+D G STFM+EM E A ++K T S
Sbjct: 622 LIVIMAQMGCFVPADEAHIGVVDKIFSRIGASDDISSGQSTFMVEMSEVANILKNATPKS 681
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQ 691
L+I DE+GRGTST+DG +A ++ +A + TLFATH+HE+ L IP +N +
Sbjct: 682 LIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVKNYR 741
Query: 692 VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V E+ N++ L ++ G C SYG+H A++AG PE++L++A +++K+ E
Sbjct: 742 VDVKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLE 792
>gi|422877527|ref|ZP_16923997.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1056]
gi|332360166|gb|EGJ37980.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1056]
Length = 849
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 189/645 (29%), Positives = 314/645 (48%), Gaps = 64/645 (9%)
Query: 159 EFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFS 218
E E+ L +N L+ + + L + +LL E L+ Y+ + +
Sbjct: 181 EAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVHRTQMRELSHLKK 240
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+ ++ M A +SL + + + S + + SL ++D +T G R+L W+++P
Sbjct: 241 AQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAMGGRMLRSWIQRP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D I +R V + +++ R +L E +L+G+ D++ LA R+ K KD ++
Sbjct: 299 LIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFGKTNPKDLLQLAA 357
Query: 339 GVSQLPKLISILES--------LVQNVEA-SNLNTILSSLQSL----------------- 372
+ +P++ +IL+ L++ ++ L ++SS S
Sbjct: 358 TLGNVPQIKAILQGIGSQHLARLIEGLDPIPELAGLISSAISPDAPHIITEGNIIRTGFD 417
Query: 373 KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRY 429
+ +D+ V+ + + LE R + +++ I N G+ + +T + +
Sbjct: 418 ETLDQYRLVLREGTGWIAELEVKERANSGISNLKIDY-NKKDGYYFHVTNSQLAHVPSHF 476
Query: 430 TILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAG 477
T++ RF + LA +AN +Y+ R I EE +
Sbjct: 477 FRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGK 524
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQG 536
Y Q L L+ LA DVL SF A+ VRP L + + RH +VE + G
Sbjct: 525 YIQRLQALAQTLAAVDVLQSF--AAVAEQLHLVRPVFT--AERRLQIEKGRHAVVEKVMG 580
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +VP SA++ + D
Sbjct: 581 AQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVPAQSASLPLFD 639
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+T+DG +A +I
Sbjct: 640 AIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTATYDGMALAQAI 699
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ + TLFATH+HE+ L + NV V+ LE++ + L++++PG KSY
Sbjct: 700 IEHIHHYTGAKTLFATHYHELTALENSLEHLENVHVATLEKDGQVTFLHKIEPGPADKSY 759
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEE 761
G+H AK+AG PE +LE+A ++ E S DT S T +R ++
Sbjct: 760 GIHVAKIAGLPEKLLERADSILSHLE-SQDTGLGSELPTASRPKQ 803
>gi|261855270|ref|YP_003262553.1| DNA mismatch repair protein MutS [Halothiobacillus neapolitanus c2]
gi|261835739|gb|ACX95506.1| DNA mismatch repair protein MutS [Halothiobacillus neapolitanus c2]
Length = 881
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 201/705 (28%), Positives = 334/705 (47%), Gaps = 61/705 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLN--DNKNKIVTILDR 147
G+A +DL F + + D + L A + + P+E LLP D KI R
Sbjct: 146 GLAHLDLAAGDFVLMRLDD----AALTAELARIDPRELLLPESLAEAADTAAKIGVDPKR 201
Query: 148 NKVCMTGRKKNEFSEEDLMQ--DVNRLVRFDDSELKNARL-LPEMCLTTATHCLRSLINY 204
+ + + + L++ ++ L F +E+ L + LT RS + +
Sbjct: 202 WRTRADWQFDAKRGQAALLKHWQIHDLKSFGVTEIHQPALGAAAILLTYVAETQRSAVPH 261
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS-TSAQTYDSLLGILDRCR 263
+E + E + I D + H+ L Q+GS ++ +L+ +LD
Sbjct: 262 IERLRVEHLGDALLI---DRNTRRHLE------LFTSNQEGSHDDGRSAATLINLLDETV 312
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
T G RLL W+ +PL+D + R A+ L+ ++N +LRG+ D++ + RI
Sbjct: 313 TAHGSRLLKHWLGRPLRDQAVLRHRQQAIGELIER--GKINALRESLRGINDIERITTRI 370
Query: 324 ------GRKKAGLKDCYRVYEGVS-QLPKL-ISILESLV-----QNVEASNLNTILSSLQ 370
R +GL+D V +S QL +L + + L Q LN L +
Sbjct: 371 VMGSARPRDLSGLRDALGVLPALSAQLNQLDLPLWRDLAVRLTDQPAPRELLNRALVTQP 430
Query: 371 SLKMMDRK------DAVMDKMKEYLESTARRLNLV--------ADKTIKLE-NSPQGFAY 415
+ + D DA +D+++ E LN + +++K+ N QGF +
Sbjct: 431 PVWLRDGGVIAAGFDAELDELRHLSEHADDALNALEAQARLQSGIQSLKIAYNRVQGFYF 490
Query: 416 RITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGIS 475
++ + ++ T++ R+ + L T + + + +Q + E++
Sbjct: 491 EVSRLQAEKMPPQFIRRQTLKSVERYTTEELKTFEDRVLSARDRALAREQGLFTELLQTL 550
Query: 476 AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQ 535
A + L ++++ +A+ DVL S + + C + +V P + + + RHP++E
Sbjct: 551 ATHQSALRRMAEAIAEVDVLHSLARVAEC--QRWVAPELG--SEPGIHIEAGRHPVIEAL 606
Query: 536 -----GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
G + PND ++TGPNMGGKSTY+R + V LA IG FVP A
Sbjct: 607 TKQTLGNQPFTPNDCELTPNR-QLLMITGPNMGGKSTYMRQTALIVLLAHIGAFVPATRA 665
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
I +D+IFTR+GA D G STFM+EM ETA ++ TENSLV+IDE+GRGTSTFDG
Sbjct: 666 RIGPIDRIFTRIGAGDDLASGRSTFMVEMTETAEILHTATENSLVLIDEIGRGTSTFDGL 725
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
+A ++A L + TLFATH+ E+ L+ T RNV + A+ +D+L+ L+ VK G
Sbjct: 726 ALAWAVAEHLIRRNRALTLFATHYFELTQLTERFDTVRNVHLDAVTHKDDLIFLHSVKDG 785
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE--YSLDTKTPSGD 753
+SYG+ A +AG P + + +A+ L+K+ E + + TP D
Sbjct: 786 PASQSYGIKVAALAGLPREAIRRAQALLKQLEQQHPVGAATPQLD 830
>gi|332685817|ref|YP_004455591.1| DNA mismatch repair protein MutS [Melissococcus plutonius ATCC
35311]
gi|332369826|dbj|BAK20782.1| DNA mismatch repair protein MutS [Melissococcus plutonius ATCC
35311]
Length = 862
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 281/551 (50%), Gaps = 58/551 (10%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
Q + Q +LL +LD +T G RLL QW+ +PL + I +R V L++ RM
Sbjct: 269 QSIRTGQKKGTLLWLLDETKTAMGGRLLKQWLDRPLIQEEQIKKRQEMVQSLLDAYFERM 328
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+L + AL + D++ LA R+ +D ++ + Q+P + + L+ ++
Sbjct: 329 DL-QTALTSVYDLERLAGRVAFGNVNGRDLIQLKTSLEQVPAI----QQLIIGIDHGEWK 383
Query: 364 TIL--------------------SSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKT 403
+L S LQ + KD +++ EY ++ +A+
Sbjct: 384 DLLVDLTPMDELVELICMAINEESPLQITEGNVIKDGYDEQLDEYRDAMRHGKQWLAELE 443
Query: 404 IK------LENSPQGF----AYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLA--- 447
K ++N GF Y I + L N DRY T+ RF +L
Sbjct: 444 AKERMGTGIKNLKVGFNRVFGYYIEITKANLGNLNIDRYERKQTLANAERFVTPQLKQIE 503
Query: 448 --TANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCA 505
+ +++ EY+ + V E I + Y Q L + ++ DVL +F A+
Sbjct: 504 HLILEAEEKSVDLEYQLFLK--VREQIKENIEYLQYL---AKTISNLDVLQAF--ATVSE 556
Query: 506 PKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGG 564
YV P +K G SL + + RHP+VE + G YIPN++ S + L+TGPNM G
Sbjct: 557 KYHYVCPELKNYGK-SLSIVEGRHPVVEKVLGYQEYIPNNIEMDSATTTL-LITGPNMSG 614
Query: 565 KSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETAT 624
KSTY+R + ++V +AQIGCFVP +SA + + DQIFTR+GA+D G STFM+EM E
Sbjct: 615 KSTYMRQLALTVIMAQIGCFVPAESAILPIFDQIFTRIGASDDLIAGQSTFMVEMMEANQ 674
Query: 625 VIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVI 684
++ T NSL++ DELGRGT+T+DG +A +I + + + TLF+TH+HE+ +L + +
Sbjct: 675 ALRHATPNSLILFDELGRGTATYDGMALAQAIIEYIHQNVRAKTLFSTHYHELTILDQSL 734
Query: 685 PTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-- 742
P +NV V A+E+ + ++ L+++ G KSYG+H AK+AG P +LE+A ++ E
Sbjct: 735 PDLKNVHVGAIEKNNEVIFLHKIMEGPADKSYGIHVAKIAGLPNGLLERATVVLSSLESE 794
Query: 743 ---YSLDTKTP 750
LDT P
Sbjct: 795 NNLTKLDTSIP 805
>gi|431763134|ref|ZP_19551687.1| DNA mismatch repair protein mutS [Enterococcus faecium E3548]
gi|430622828|gb|ELB59538.1| DNA mismatch repair protein mutS [Enterococcus faecium E3548]
Length = 881
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 205/703 (29%), Positives = 339/703 (48%), Gaps = 95/703 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G A DL T + + D++ N EA +Q KE +L +E I D
Sbjct: 138 NEFGFAYADLSTGELKTARLHDEEAVLN-EASALQT--KELVLGSE-----------ITD 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSEL-------KNARLLPEMCLTTATHCLR 199
+ ++GR FS+++ M++ N F SEL +LL + +T R
Sbjct: 184 TLREQLSGRLGLVFSQQNEMEE-NAEFSFLTSELVDPLEKEATGKLLTYLAVTQK----R 238
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
SL + + +++Y + S ++ Q + + + +LL +L
Sbjct: 239 SLAHIQK--------------AVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLL 284
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D +T G RLL QW+ +PL I R V L+++ R++L AL + D++ L
Sbjct: 285 DETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQS-ALTKVYDLERL 343
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----KMM 375
A R+ +D ++ + Q+P ++ L++ ++ ++LS +Q + +++
Sbjct: 344 AGRVAFGNVNGRDLIQLKTSLEQVP----MIRGLIEGIDQGQWQSLLSEMQPMDHLVQLI 399
Query: 376 DR----------------KDAVMDKMKEY-------------LESTARRLNLVADKTIKL 406
D+ KD +++ Y LE+ R+ + + I
Sbjct: 400 DQAIQDDPPLQITEGNIIKDGFNEQLDTYRSAMRNGKKWLAELEAKERQETGIKNLKIGF 459
Query: 407 ENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREY 460
N G+ IT L N+ ++Y T+ RF L TQ +++ EY
Sbjct: 460 -NRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEY 518
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ ++ EEV Q L L+ ++ DVL SF A+ YVRP +
Sbjct: 519 QLFL-AVREEV----KKAIQPLQVLAKAISAVDVLQSF--ATISERYQYVRPELVS-DKH 570
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
L++ RHP+VE + G YIPN V E+ L+TGPNM GKSTY+R + ++V +A
Sbjct: 571 QLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMIL-LITGPNMSGKSTYMRQLALTVLMA 629
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+GCFVP A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DE
Sbjct: 630 QMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDE 689
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + H Q TLF+TH+HE+ +L + + +NV V A+E++
Sbjct: 690 LGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELLQLKNVHVGAVEKDG 749
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++ G +SYG+H AK+AG P ++LE+A D++ E
Sbjct: 750 EVVFLHKMMDGPADRSYGIHVAKIAGLPANLLERAADILHTLE 792
>gi|259046523|ref|ZP_05736924.1| DNA mismatch repair protein HexA [Granulicatella adiacens ATCC
49175]
gi|259036688|gb|EEW37943.1| DNA mismatch repair protein HexA [Granulicatella adiacens ATCC
49175]
Length = 865
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 184/589 (31%), Positives = 283/589 (48%), Gaps = 39/589 (6%)
Query: 185 LLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQ 244
L+ E+ + C+++L++YL+L + + Y+ M+ +L +
Sbjct: 226 LVSELEDEASVRCVQNLLSYLKLTQKRSFSHLQKAQAYQSEFYLSMNYETKRNLEL--TM 283
Query: 245 GSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMN 304
S Q + SL LD +T G RLL QW+++PL AI +RHA V L + R +
Sbjct: 284 TIRSNQKHGSLFWFLDETQTAMGGRLLKQWLEKPLVLEGAIQKRHALVETLNQHYFERTD 343
Query: 305 LHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNT 364
E L+ + D++ + ++ A +D ++ + +SQ+P SI++SL ++
Sbjct: 344 FIE-TLKRVYDLERIVGKVSFGTANARDLLQLKQTLSQVPIFKSIVDSLDSEAWSALGEN 402
Query: 365 ILSSLQSLKMMDRK-----------------------DAVMDKMKEYLESTA------RR 395
+ + ++DR D D MK E A R
Sbjct: 403 LFDIPELYDLIDRAIDEDAPLTISDGNIIRSGYNATLDTYRDTMKHGKEWIASLQQQERE 462
Query: 396 LNLVADKTIKLENSPQGFAYRITMKLNNSIDD-RYTILDTVRGGVRFQDDRLATANTQYQ 454
++ I N G+ +T + +D RY T+ RF L T
Sbjct: 463 QTGISSLKISF-NKVFGYYIEVTKSNLSKLDSSRYERKQTLANAERFITPELKEKETLIL 521
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
+ + + + EV YT L QL+ +A DVL +FS+ S V+P +
Sbjct: 522 EAEEKSSALEYQLFVEVREQVKHYTAELQQLAKTVATIDVLQAFSVVS--ERYHLVKPTI 579
Query: 515 KPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
M L + RHP+VE + G +Y+PN + E L+TGPNM GKSTY+R +
Sbjct: 580 S-MKNRRLWIEDGRHPVVEKVMGQSTYVPNSISMSPDE-HILLITGPNMSGKSTYMRQLA 637
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
+ V LAQIGCFVP SATI V +IFTR+GAAD G STFM+EM ET ++ E S
Sbjct: 638 LCVILAQIGCFVPAKSATIPVFTKIFTRIGAADDLISGQSTFMVEMMETNHALRNADETS 697
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVS 693
L++ DE+GRGT+T+DG +A +I + H LF+TH+HE+ LS RNV V
Sbjct: 698 LLLFDEIGRGTATYDGMALAEAIITYIHEHLSAKVLFSTHYHELTRLSEKYADLRNVHVG 757
Query: 694 ALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
A+E+ +V L++V G KSYG+H AK+AG P ++L+ A ++ E
Sbjct: 758 AVEENGEVVFLHKVLEGPADKSYGIHVAKLAGLPTELLKNASTILNHLE 806
>gi|385831796|ref|YP_005869609.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp. lactis
CV56]
gi|418038832|ref|ZP_12677148.1| hypothetical protein LLCRE1631_01955 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|326407804|gb|ADZ64875.1| DNA mismatch repair protein MutS [Lactococcus lactis subsp. lactis
CV56]
gi|354692839|gb|EHE92644.1| hypothetical protein LLCRE1631_01955 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 840
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 289/549 (52%), Gaps = 44/549 (8%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A SSL + + + + +L +LD +T G R+L W+ +PL AI
Sbjct: 247 FLQMDFATKSSLELTANKREN--KKHGTLYWLLDETKTAMGTRMLRSWIDRPLVSNSAIQ 304
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V I +++ R +L E AL+G+ D++ LA R+ KA D ++ +S +P +
Sbjct: 305 KRMEIVQIFLDHFFERSDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAI 363
Query: 347 ISIL----ESLVQNV--------EASNL-NTILSSLQSLKMMDRK------DAVMDKMKE 387
+IL E+ ++ + E S L N+ +S S + + +A +DK +E
Sbjct: 364 KNILGMLNEAPLEELKSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNAQLDKYRE 423
Query: 388 YLES-TARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
LE+ T+ L AD+ T++++ N G+ + IT NS+ + + T++
Sbjct: 424 ALENGTSWIAKLEADEKAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNS 483
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVI----GISAGYTQTLNQLSDVLAQFDV 494
RF L T+ + I E S+ ++ + Y L L+ +A+ D
Sbjct: 484 ERFGSQEL----TEIEEIMLEAREKSSSLEYDLFMDLRTETEQYIGRLQALAKTIAEIDC 539
Query: 495 LVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVS 553
L S S+ + Y+RP + G+ + + RH +VE + G Y+PND+ +
Sbjct: 540 LQSLSV--VAEKQGYIRPTLTD-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QTD 595
Query: 554 FNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGIS 613
L+TGPNM GKSTY+R ++V +AQIG FVP ++A + + D IFTR+GA+D+ G S
Sbjct: 596 IQLITGPNMSGKSTYMRQFALTVIMAQIGSFVPAETANLPIFDAIFTRIGASDNLISGES 655
Query: 614 TFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATH 673
TFM+EM E I+K + SL+I DELGRGT+T+DG +A +I + H TLFATH
Sbjct: 656 TFMVEMSEANHAIQKASSRSLIIFDELGRGTATYDGMALAQAIIEYVHDHIGAKTLFATH 715
Query: 674 FHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQ 733
+HE+ L + NV V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE+
Sbjct: 716 YHELTDLDEALVHLDNVHVATLEQNGNVTFLHKITEGPADKSYGIHVAKIAGLPQPLLER 775
Query: 734 ARDLMKEYE 742
A ++++ E
Sbjct: 776 ADLILQKLE 784
>gi|167037586|ref|YP_001665164.1| DNA mismatch repair protein MutS [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116001|ref|YP_004186160.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856420|gb|ABY94828.1| DNA mismatch repair protein MutS [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929092|gb|ADV79777.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 867
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 198/692 (28%), Positives = 340/692 (49%), Gaps = 67/692 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T Y E+ + + I + +P E + ++L +NK + I +N
Sbjct: 137 GICAVDVTTGDLYATELKNCKDIKRVYDEITKYAPSEIIANEDFLKNNK--YIKIF-KNN 193
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
C + + E+ ++ + EL + P M + L +L +YL+ +
Sbjct: 194 NCAVNIYEKQLDYEEKIKLIETQFNKKSEEL-GIKDKPYMA-----NSLAALFSYLQELQ 247
Query: 210 NE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
++N+ I+ + + Y+ + S + +L +L + S + SLLG+LD+ TP G
Sbjct: 248 KTALKHINKLLIY--EDNSYMGLDSNAIKNLEILESNRNKSKKG--SLLGVLDKTVTPMG 303
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL +W+++PL + I R AV L N+ + R +L ++ L + D++ LA +I +
Sbjct: 304 GRLLKKWLEEPLLSKEHIDARLEAVEELFNDYKNRQDLKQF-LNKIYDLERLASKIVYQS 362
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK----MMDRK----- 378
KD + + LP + ILE + L I +L+ ++D+
Sbjct: 363 INPKDFISIKLSLQNLPYIKEILEKFNSRL----LKEICEKFDTLQDIYELIDKSIKDDP 418
Query: 379 --------------DAVMDKM-KEYLESTARRLNLVADKTIK--LENSPQG----FAYRI 417
+ ++DK+ K E NL A++ K ++N G F Y I
Sbjct: 419 STQLKEGNIIKGGYNEIVDKLRKASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYI 478
Query: 418 TMKLNN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIVEE 470
+ +N + +RY T+ R+ L + + I+ EY+ + + E
Sbjct: 479 EVTKSNIPQVPERYIRKQTLANAERYVTPELKEIEETILGAEEKLIELEYQLFNE--IRE 536
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
+ + Q + +A DVL+SF A Y++P + + +V+ + RHP
Sbjct: 537 KVELQIVRIQNT---AKYIATIDVLISF--AEVAETNRYIKPIVDY--SDRIVIKEGRHP 589
Query: 531 IVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
++E S++ ND+ E ++TGPNM GKSTY+R + + V +AQIG FVP A
Sbjct: 590 VIETISDESFVANDIDI-GPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYA 648
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
I +VD+IFTRVGA+D + G STFM+EM E A ++K T SL+I+DE+GRGTST+DG
Sbjct: 649 KIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGM 708
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
+A ++ + + TLFATH+HE+ L + RN VS E+ED+++ L ++ PG
Sbjct: 709 SIAHAVIEYIHEKIKAKTLFATHYHELTKLEGKMKGVRNYNVSVEEREDDIIFLRKIVPG 768
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+ +K+AG P ++E+A++++ E
Sbjct: 769 GADKSYGIQVSKLAGLPYSIVERAKEILNSLE 800
>gi|257066441|ref|YP_003152697.1| DNA mismatch repair protein MutS [Anaerococcus prevotii DSM 20548]
gi|256798321|gb|ACV28976.1| DNA mismatch repair protein MutS [Anaerococcus prevotii DSM 20548]
Length = 868
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 170/586 (29%), Positives = 306/586 (52%), Gaps = 42/586 (7%)
Query: 197 CLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLL 256
L +L++Y+ + ++ ++ +I ++ + Y+ + ++ +L + + + + +SLL
Sbjct: 242 SLANLLDYIYKYHKDNLVHINNIDILEINDYMELEASTRKNLELSKNLNNNTKE--NSLL 299
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
I+D+ T G R++++++++PL D I R V +L N+ N+ L + D+
Sbjct: 300 SIIDKADTVMGSRMISEYLERPLIDKRKIERRLDIVEVLFNDRILASNISNL-LSDVYDL 358
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL-KMM 375
+ L +I K+A +D + ++ +PKL IL S + SN+ + + + ++
Sbjct: 359 ERLIAKISYKRANGRDFISLKNSIANIPKLKDILRSY-SDTNISNIGENIPDVSDIFDLI 417
Query: 376 DR----------------KDAV---MDKMKEYLESTARRL----NLVADKT-IK----LE 407
D+ KD+ +DK+KE S L N +KT IK +
Sbjct: 418 DKAIVEDPPIAISEGGIIKDSYNDELDKLKESSSSAQSALIEYENKEREKTGIKNYKIVF 477
Query: 408 NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSI 467
N G++ IT + + D Y T++ R+ ++L ++ + + I
Sbjct: 478 NKNNGYSIEITKSNLDKVPDSYVRKQTLKNQERYTTEKLEEISSLILGGKDRINDLEYKI 537
Query: 468 VEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQC 527
+E+ T L L+ +LA D L +F A YVRP ++ + +
Sbjct: 538 FQEIREKVLKNTIKLQALAKILATVDTLNTF--AKISLENSYVRPVIRE--DNIIKIKDG 593
Query: 528 RHPIVELQ-GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 586
RHP++E + +IPND ++TGPNM GKSTY+R + + + LAQ+GCFVP
Sbjct: 594 RHPVIERKLKENEFIPNDTDIGEENNLIQIITGPNMAGKSTYMRQMAIIIILAQMGCFVP 653
Query: 587 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 646
A IS+ DQ+FTR+GA+D+ +G STFM+EM E ++++K TE+S VI+DE+GRGTS+
Sbjct: 654 ASLAEISICDQVFTRIGASDNISKGESTFMLEMNEVSSILKNSTEHSFVILDEVGRGTSS 713
Query: 647 FDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQ 706
DG +A +I L+ ++ T+FATHFHE+ +L + + +N+++ LE+ +NLV L +
Sbjct: 714 DDGLSIAMAIVEYLSKRKKVKTVFATHFHELTILEKELDNVKNLKIEILEENNNLVFLRK 773
Query: 707 VKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE----YSLDTK 748
+ G +SYG+ AK++G P ++++ A+ +M + Y LD K
Sbjct: 774 ISEGKSDRSYGIEVAKLSGLPNEIIDNAKIIMDKLSTDDFYDLDKK 819
>gi|418036222|ref|ZP_12674652.1| hypothetical protein LDBUL1519_01352 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354688571|gb|EHE88608.1| hypothetical protein LDBUL1519_01352 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 856
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 184/583 (31%), Positives = 288/583 (49%), Gaps = 52/583 (8%)
Query: 197 CLRSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
+R L+ YL L + ++ + S + +Y+ M++ V +L + Q +T+ + SL
Sbjct: 223 AVRQLVVYL-LATQKRSLAHLQVAESFEIGQYLQMANTVQRNLEL--TQSATTGRKQGSL 279
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+LD+ T G RLL QW+ +PL LD I +R V L+++ R N+ + +L+G+ D
Sbjct: 280 FWVLDKTTTAMGGRLLKQWLSRPLLSLDRIKQRQQMVQALLDDYFTRENIVD-SLKGVYD 338
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL--------ESLVQNVEASN--LNTI 365
++ L+ R+ ++ ++ + + +I L E Q ++ + +I
Sbjct: 339 LERLSGRVAFGNVNPRELLQLAKSLEATKLIIQTLAESGNPDLEKYGQGIDPQSELAESI 398
Query: 366 LSSLQSLKMMDRKDAV---------MDKMKEYLESTARRL---NLVADKTIKLENSPQG- 412
+ L + KD +DK +E + + L + + ++N G
Sbjct: 399 TNCLVDQPPISAKDGGIIRAGVSEDLDKYREAMNGGKKWLAQMEMEERQRTGIDNLKIGY 458
Query: 413 ---FAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLAT-ANTQYQAIQR----EYE 461
F Y I + N DRYT T+ R+ L N +A R EYE
Sbjct: 459 NRVFGYFIQVSKGNVAKVPQDRYTRKQTLTNAERYITPELKEHENLILEAESRSTDLEYE 518
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q + E + + L +L LA DV V+F A K Y RP
Sbjct: 519 LFSQ--LREAV---KAHIPDLQELGRQLAALDVFVAF--AQDAEEKNYCRPSFS--SKNE 569
Query: 522 LVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
+ + RHP+VE L G SYIPND+ + S L+TGPNM GKSTY+R + + +A
Sbjct: 570 IAVKNGRHPVVEAVLPAG-SYIPNDLVMDE-DTSIYLITGPNMSGKSTYMRQLALIAIMA 627
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
QIG FVP DSA + V DQ+FTR+GAAD Y G STFM+EM E ++ + SLV+ DE
Sbjct: 628 QIGSFVPADSAKLPVFDQVFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDE 687
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+T+DG +A +I + L TLFATH+HE+ L + +N+ V A E+
Sbjct: 688 IGRGTATYDGMALAGAIIKYLHDKVGAKTLFATHYHELTELDETLLHLKNIHVGATEENG 747
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L+++ PG +SYG+H AK+AG P +L +A ++K E
Sbjct: 748 KLIFLHKILPGPADQSYGIHVAKLAGLPRVVLREASSMLKRLE 790
>gi|335040815|ref|ZP_08533936.1| DNA mismatch repair protein mutS [Caldalkalibacillus thermarum
TA2.A1]
gi|334179250|gb|EGL81894.1| DNA mismatch repair protein mutS [Caldalkalibacillus thermarum
TA2.A1]
Length = 875
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 280/543 (51%), Gaps = 47/543 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ T G RLL +W+ +PL D + I +R V ILVNN R + L+ +
Sbjct: 282 SLLWLLDQTSTAMGGRLLKKWLTRPLLDQELIEQRLDIVEILVNNPLVREEIM-LILKEV 340
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK 373
D++ LA R+ +D ++ + LP L+ L+ L N +++I + +K
Sbjct: 341 YDLERLAARVAFGNVTPRDLLQLKRSLQALPDLLEQLDQLPNNCMHPLIDSIDPCPELVK 400
Query: 374 MMDR----------------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
++D+ K +++ + +++ N +++ K++K+
Sbjct: 401 LLDQSLSEDAPVTIKEGGIFKPGYNEELDQLNKASREGKNWISELEQKERERTGIKSLKV 460
Query: 407 E-NSPQGFAYRITMKLNNSIDD-RYTILDTVRGGVRF-----QDDRLATANTQYQAIQRE 459
N G+ +T + +D+ RY T+ RF ++ + +AI+ E
Sbjct: 461 GYNKVFGYYIEVTKANVHLLDEGRYQRKQTLSNAERFITPELKEKEALILDASERAIELE 520
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
Y+ + E+ YT L +L+ ++AQ D L SF A YVRP
Sbjct: 521 YQ-----LFIELRDKVKNYTYRLQKLAGIIAQIDCLCSF--AKVSEKYHYVRPRFSQ--N 571
Query: 520 GSLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
G LV+ + RHP+VE L G ++ ND+Y + L+TGPNM GKSTY+R + V
Sbjct: 572 GELVIQEGRHPVVEQVLPSG-EFVANDLYMNDKDRQILLITGPNMAGKSTYMRQLAQIVI 630
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQ+GCFVP AT+ + DQIFTR+GAAD G STFM+EM ET I K T NSL+++
Sbjct: 631 MAQMGCFVPAKEATLPIFDQIFTRIGAADDLVGGQSTFMVEMMETKRAITKATPNSLILL 690
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A ++ + Q TLF+TH+HE+ L + + +N+ V+ E
Sbjct: 691 DEIGRGTSTYDGMSLAQAVIEYIHHQVQAKTLFSTHYHELTDLEQELERVKNIHVACSEH 750
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
E + L++V G +SYG+H A++AG P+ ++E+A +++ E +T +
Sbjct: 751 EGRITFLHKVLEGKADRSYGIHVAELAGMPKAVIERAAAILQVLESKAETAVATDQHGTY 810
Query: 758 REE 760
R++
Sbjct: 811 RDK 813
>gi|352518374|ref|YP_004887691.1| DNA mismatch repair protein MutS [Tetragenococcus halophilus NBRC
12172]
gi|348602481|dbj|BAK95527.1| DNA mismatch repair protein MutS [Tetragenococcus halophilus NBRC
12172]
Length = 862
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 297/582 (51%), Gaps = 58/582 (9%)
Query: 201 LINYLELMNNE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGI 258
L+ YL L D++ + + +D+ Y+ M ++L + Q + + + +LL +
Sbjct: 229 LLRYLLLTQKRSLDHIQKAQSYEVDH--YLKMDHYSKANLEL--SQSIRTGKKHGTLLWL 284
Query: 259 LDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQS 318
LD +T G RLL QW+ +PL AI++R V L+ R +L + AL + D++
Sbjct: 285 LDETKTAMGGRLLKQWLDRPLIQKSAILKRQDQVASLLQAFFEREDLKQ-ALTKVYDLER 343
Query: 319 LAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES------------------LVQNVE-A 359
LA R+ +D ++ + Q+P + SILE LVQ +E A
Sbjct: 344 LAGRVAFGNVNGRDLLQLKTSLEQVPAIRSILEGIDQGEWVETLKGMEPMEDLVQLIEQA 403
Query: 360 SNLNTILSSLQSLKMMDRKDAVMDKMKEYL--------ESTARRLNLVADKTIKLE-NSP 410
N ++ + + D + +DK +E + E A+ N K +K+ N
Sbjct: 404 INEEAPIAVTEGNVIKDGFNEQLDKYREAMRNGKQWIAELEAKERNKTGIKNLKVGYNRV 463
Query: 411 QGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQ 464
G+ IT L N + RY T+ RF L Q +++ EYE
Sbjct: 464 FGYYIEITRANLANLEEGRYERKQTLANAERFITPELKELEKQILEAEEKSVDLEYEL-- 521
Query: 465 QSIVEEVIGISAGYTQTLNQL---SDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
+ + Q +++L + +++ DVL SF++ S YVRP + T
Sbjct: 522 ------FLDVRKKVKQAIDRLQYLAKMISTTDVLQSFAVISERYQ--YVRPELSDDKTLD 573
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+V + RHP+VE + G YIPN + E L+TGPNM GKSTY+R + ++V LAQ
Sbjct: 574 IV--EGRHPVVEKVLGAQEYIPNSIQMDQ-ETLILLITGPNMSGKSTYMRQLALTVILAQ 630
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+GCFVP SA + + D+IFTR+GA+D G STFM+EM E + T NSLV+ DEL
Sbjct: 631 MGCFVPAQSAVMPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALSHATANSLVLFDEL 690
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + H TLF+TH+HE+ +L + +N+ V A+E++ +
Sbjct: 691 GRGTATYDGMALAQAIIEYIHQHVGAKTLFSTHYHELTVLQDELTQLKNIHVGAVEKDGD 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LV L+++ G KSYG+H AK+AG PE++L++A +++ E
Sbjct: 751 LVFLHKMMDGPADKSYGIHVAKIAGLPEELLDRADIILQALE 792
>gi|148264432|ref|YP_001231138.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
gi|189030727|sp|A5G447.1|MUTS_GEOUR RecName: Full=DNA mismatch repair protein MutS
gi|146397932|gb|ABQ26565.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
Length = 872
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 206/734 (28%), Positives = 352/734 (47%), Gaps = 88/734 (11%)
Query: 58 VLVNKSNLSCF--SHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNL 115
++V+ SNLS +++L + +D T T G++ +DL T +F + E+ D +
Sbjct: 113 LVVDSSNLSPKENNYLLSLYCDDAT-------TWGLSYLDLSTGEFRVTEL---DGFDAA 162
Query: 116 EAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRF 175
A + P+E +LPA + + + K + + +T F + D + D++ R
Sbjct: 163 VAEVACVKPREIILPAVFRENGRMKEL-------MPVTAGLATTFVD-DWVYDLDYCKRL 214
Query: 176 DDSELKNARLLPEMC--LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSA 233
S A C L T + + ++++YL+ + SI +Y+ + +
Sbjct: 215 IGSHFGGASPSALGCDGLNTGLYAICAVLHYLQETQKGRAGHVNSIIPYTNREYLVLDES 274
Query: 234 VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVN 293
+L + + SLLG++DR T G R + QW+ PL + +I ER A+
Sbjct: 275 TRRNLELTATL--AEGKRKGSLLGLMDRTTTAMGGRKMKQWINYPLVTIQSITERQDAIE 332
Query: 294 ILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCY------------------- 334
V + R L + L G+ D++ L RI AG KD
Sbjct: 333 EFVQDPSRRTAL-VFLLNGVYDLERLNGRISLASAGAKDLVAMKESLARIPGIKELLASS 391
Query: 335 ------RVYEGVSQLPKLISILES-LVQN---------VEASNLNTILSSLQSLK----- 373
R+ EG++ LP L+ ++ +V+N + A N L L+++
Sbjct: 392 SSVLLRRLNEGLNPLPDLVGLIAGGIVENPPFVLRDGGIIADGYNAELDELRAISREGKG 451
Query: 374 MMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRITMKLNN--SIDDRYTI 431
+ R +A +K + + S R N V F Y I + N SI Y
Sbjct: 452 FIARLEA-QEKGRTGINSLKIRYNKV-------------FGYYIEVTKTNLTSIPADYIR 497
Query: 432 LDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQ 491
T+ R+ L + + + S+ +E+ G+ + + + +D LA
Sbjct: 498 KQTLANAERYITPELKEYEDKVLGAEDRIRELEFSLFQEIRETVTGHGEIVARTADCLAT 557
Query: 492 FDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSG 550
DVL S +A + Y RP + GT +L +++ RHP++E + G ++PND +G
Sbjct: 558 LDVLAS--LAELAHERNYCRPLVDD-GT-TLFISEGRHPVIEAMHQGERFVPNDTLLDNG 613
Query: 551 EVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYR 610
E ++TGPNM GKST++R + + +AQ+G FVP A IS+VD+IFTRVGA+D+ R
Sbjct: 614 ENQLIIITGPNMAGKSTFMRQVALITLMAQMGSFVPATEAHISLVDRIFTRVGASDNLAR 673
Query: 611 GISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ--PFT 668
G STFM+EM E+A +++ T SLVI+DE+GRGTSTFDG +A ++A L + + T
Sbjct: 674 GQSTFMVEMMESANILRHATPKSLVILDEIGRGTSTFDGVSIAWAVAEFLHDNDKHAAKT 733
Query: 669 LFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPE 728
LFATH+HE+ L+ +N ++ E + ++ L ++ G SYG+ A++AG P
Sbjct: 734 LFATHYHELTELAVTRKRIKNFNIAVKEWNEQIIFLRKIVSGGASHSYGIQVARLAGLPL 793
Query: 729 DMLEQARDLMKEYE 742
+++E+A+++++ E
Sbjct: 794 EVIERAKEILQNLE 807
>gi|295425864|ref|ZP_06818544.1| DNA mismatch repair protein MutS [Lactobacillus amylolyticus DSM
11664]
gi|295064467|gb|EFG55395.1| DNA mismatch repair protein MutS [Lactobacillus amylolyticus DSM
11664]
Length = 865
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 304/629 (48%), Gaps = 74/629 (11%)
Query: 201 LINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL +L
Sbjct: 227 LVGYL-LTTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELI--SSAKTGKKMGSLFWVL 283
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D+ T G RLL +W+ +PL ++ I +R V L++N R N+ + AL+G+ D++ L
Sbjct: 284 DKTHTAMGGRLLKRWLSRPLLSIEEINKRQEMVQSLLDNYFTRENVID-ALKGVYDLERL 342
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK------ 373
RI ++ ++ + +P IL++L Q+ +++ L + LK
Sbjct: 343 TGRIAFGNVNARELLQLSRSLQAVP---VILDALKQS-DSTELKDFADKIDPLKGVAELI 398
Query: 374 -----------------MMDRKDAVMDKMKEYLESTARRL-NLVADKTIK--LENSPQG- 412
+ D DA +D+ ++ + + + L + AD+ K +EN G
Sbjct: 399 STTLVKDPPILTTEGGLIQDGVDAQLDRYRDAMNNGKKWLAQMEADEREKTGIENLKVGY 458
Query: 413 ---FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYE 461
F Y I + N DRYT T+ R+ L Q ++ EY+
Sbjct: 459 NKVFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLIMEAQTRSTDLEYD 518
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
+ + EEV Y L +L + LA DV F A+ Y RP
Sbjct: 519 LFVK-LREEV----KKYIPALQKLGNQLAALDVYTGF--ATVAEENNYCRPSFHSANQNI 571
Query: 522 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
V+ RHP+VE + SYIPNDV + + L+TGPNM GKSTY+R + + +AQ
Sbjct: 572 DVVG-GRHPVVEKVMTAGSYIPNDVKM-ADDTDIYLITGPNMSGKSTYMRQMALIAIMAQ 629
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE+
Sbjct: 630 VGSFVPADSADLPIFDQIFTRIGAADDLISGKSTFMVEMSEANEALQYATKRSLVLFDEI 689
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+T+DG +A +I + L TLFATH+HE+ L + + +N+ V A E+
Sbjct: 690 GRGTATYDGMALAGAIVKYLHDKVGAKTLFATHYHELTDLDKTLHHLKNIHVGATEENGK 749
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS--------------LD 746
L+ L+++ PG +SYG+H A++AG P +L +A L+K E
Sbjct: 750 LIFLHKILPGPADQSYGIHVAQLAGLPHRVLREATKLLKRLEAQGASELGPASEQLNLFT 809
Query: 747 TKTPSGDETNNREEEYFKTVQEGEYQMFD 775
P +ET + E E TV E + D
Sbjct: 810 ENAPEAEETTDDEAE---TVSNAEKDVLD 835
>gi|322386537|ref|ZP_08060164.1| DNA mismatch repair protein HexA [Streptococcus cristatus ATCC
51100]
gi|417921382|ref|ZP_12564873.1| DNA mismatch repair protein MutS [Streptococcus cristatus ATCC
51100]
gi|321269456|gb|EFX52389.1| DNA mismatch repair protein HexA [Streptococcus cristatus ATCC
51100]
gi|342834065|gb|EGU68340.1| DNA mismatch repair protein MutS [Streptococcus cristatus ATCC
51100]
Length = 849
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 183/637 (28%), Positives = 303/637 (47%), Gaps = 61/637 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G E E+ L +N L+ + + L + +LL E L+ Y+
Sbjct: 169 KAREVVLGYALPEAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + ++ M A +SL + + + S + + SL ++D +T
Sbjct: 229 RTQMRELSHLKKAQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G R+L W+++PL D I +R V + + + R +L E +L+G+ D++ LA R+
Sbjct: 287 GGRMLRSWIQRPLIDEVRISQRQNVVEVFLEHFFERSDLTE-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILES--------LVQNV----EASNLNTILSSLQSLKM 374
K KD ++ + +P++ +IL+ L++ + E + L + S + +
Sbjct: 346 KTNPKDLLQLAATLGNVPQIKAILQGIGSPHLAHLIEGLDPIPELAGLISSAISPDAPHI 405
Query: 375 MDRKDAVMDKMKEYLESTARRLNLVADKTIKLE----------------NSPQGFAYRIT 418
+ + + E L+ L +LE N G+ + +T
Sbjct: 406 ITEGNIIRTGFDETLDQYRLVLREGTGWIAELEVKERANSGINNLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
+ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLAHVPGHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I EEV Y Q L L+ LA DVL SF A+ + VRP L + +
Sbjct: 518 IREEV----GKYIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPVFT--AERRLQIEK 569
Query: 527 CRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 585
RH +VE + G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +V
Sbjct: 570 GRHAVVEKVMGAQSYIPNSILLDQ-ETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYV 628
Query: 586 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 645
P SA++ + D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+
Sbjct: 629 PAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTA 688
Query: 646 TFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLY 705
T+DG +A +I + + TLFATH+HE+ L + NV V+ LE+ + + L+
Sbjct: 689 TYDGMALAQAIIEHIHHYTGAKTLFATHYHELTALEDSLEHLENVHVATLEKAEQVTFLH 748
Query: 706 QVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+++PG KSYG+H AK+AG PE +LE+A ++ E
Sbjct: 749 KIEPGPADKSYGIHVAKIAGLPEKLLERADSILSHLE 785
>gi|255531781|ref|YP_003092153.1| DNA mismatch repair protein MutS [Pedobacter heparinus DSM 2366]
gi|255344765|gb|ACU04091.1| DNA mismatch repair protein MutS [Pedobacter heparinus DSM 2366]
Length = 858
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 202/730 (27%), Positives = 358/730 (49%), Gaps = 79/730 (10%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNL------EAIIVQKSPKECLLPAEYLNDNKNK 140
NT+GV+ D+ T +F++ + + +Y L ++ QK+ ++ E+L +K
Sbjct: 128 NTIGVSFADISTGEFHVAQ-GNAEYIDKLLQGFRPNEVVFQKTKRK-----EFLEAFGDK 181
Query: 141 IVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
T + TG NE + +VN L F L+ T
Sbjct: 182 FYT-YHLDDWAFTGDYANETLTKHF--EVNSLKGFGVDRLQ-----------TGIVAAGV 227
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILD 260
+++YL + + + SI ++ KY+ + + +L ++ S++ +L +LD
Sbjct: 228 VLHYLNETEHRNLKHITSISRLEEDKYMWLDRFTIRNLELV----SSANDNAVTLFEVLD 283
Query: 261 RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLA 320
+ TP G RLL +W+ PLK+L I ER V+ LV + +A + ++ + D++ L
Sbjct: 284 QTSTPMGARLLHKWIIMPLKELKPIEERLGMVDFLVKH-DALLQEFLSHIKQIGDLERLI 342
Query: 321 MRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSLK---- 373
++G +K G ++ ++ + + + + ++ E+ +V A LN LS + L+
Sbjct: 343 SKVGLQKVGPRELCQLKKALYHIEAVKNVAEASKNPFLSVLADQLNPCLSIREKLERELQ 402
Query: 374 ------------MMDRKDAVMDKM-------KEYL-ESTARRLNLVADKTIKLE-NSPQG 412
+ D D +D++ K+YL E R ++K+ N+ G
Sbjct: 403 QDPPALLIKGNVIADGIDEELDRLRKISFGGKDYLVEIQKREAAATGIPSLKVAFNNVFG 462
Query: 413 FAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVI 472
+ +T + + + T+ R+ L Q + + + + + E++
Sbjct: 463 YYLEVTHTHKDKVPADWIRKQTLVSAERYITPELKEYEEQILGAEEKIQQIEVKLYNELM 522
Query: 473 GISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LNQCRHPI 531
+ Y + + + ++AQ DVL+ F A YV+P + G ++ + RHP+
Sbjct: 523 YQVSTYIKPIQLNAFLIAQLDVLLCF--AQLAVKNHYVKP---EINKGKVLDIKGGRHPV 577
Query: 532 VE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
+E L G +YI NDV+ + ++TGPNM GKS +R G+ V + Q+GCFVP +
Sbjct: 578 IEQRLPVGEAYITNDVFLDNDTQQIIIITGPNMSGKSAILRQTGLIVLMGQMGCFVPAKA 637
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A I +VD+IFTRVGA+D+ G STFM+EM ETA+++ ++NSL+++DE+GRGTST+DG
Sbjct: 638 AAIGLVDKIFTRVGASDNLSSGESTFMVEMNETASILNNISDNSLILLDEIGRGTSTYDG 697
Query: 650 FGMACSIARELASH--RQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
+A +IA L +H +P TLFATH+HE+ L+ + RN VS E + ++ L ++
Sbjct: 698 ISIAWAIAEFLHTHPTARPKTLFATHYHELNELATTMNRIRNFNVSIKELGNKVIFLRKL 757
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNRE-EEYFKTV 766
PG S+G+H AKMAG P ++ +A +++K+ E D T + ++ K V
Sbjct: 758 IPGGSEHSFGIHVAKMAGMPPKLINRANEILKKLEI---------DRTEGQSIKDSIKKV 808
Query: 767 QEGEYQMFDF 776
Q YQ+ F
Sbjct: 809 QNQAYQLHMF 818
>gi|14577935|gb|AAK68860.1|AF091119_1 DNA mismatch repair protein HexA [Lactococcus lactis]
Length = 841
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 288/550 (52%), Gaps = 45/550 (8%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
++ M A SSL + + + + +L +LD +T G R+L W+ +PL AI
Sbjct: 247 FLQMDFATKSSLELTANKREN--KKHGTLYWLLDETKTAMGTRMLRSWIDRPLISNSAIQ 304
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
+R V I +++ R +L E AL+G+ D++ LA R+ KA D ++ +S +P +
Sbjct: 305 KRMEIVQIFLDHFFERSDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAI 363
Query: 347 ISIL--------ESLVQNV----EASNL-NTILSSLQSLKMMDRK------DAVMDKMKE 387
IL E L + E S L N+ +S S + + +A +DK +E
Sbjct: 364 KYILGMLNEAPLEELKSQLDEIPELSGLINSAISENASRTITEGGIIKKGYNAQLDKYRE 423
Query: 388 YLES-TARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
LE+ T+ L AD+ T++++ N G+ + IT NS+ + + T++
Sbjct: 424 ALENGTSWIAKLEADEKAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNS 483
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEV-IGIS----AGYTQTLNQLSDVLAQFD 493
RF L T+ + I E S+ ++ +G+ Y L L+ +A+ D
Sbjct: 484 ERFGSQEL----TEIEEIMLEAREKSSSLEYDLFMGLRDLKRKQYIGRLQALAKTIAEID 539
Query: 494 VLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEV 552
L S S+ + Y+RP + G+ + + RH +VE + G Y+PND+ +
Sbjct: 540 CLQSLSV--VAEKQGYIRPTLTD-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QT 595
Query: 553 SFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGI 612
L+TGPNM GKSTY+R ++V +AQIG FVP ++A + + D IFTR+GA+D+ G
Sbjct: 596 DIQLITGPNMSGKSTYMRQFALTVIMAQIGSFVPAETANLPIFDAIFTRIGASDNLISGE 655
Query: 613 STFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFAT 672
STFM+EM E I+K + SL+I DELGRGT+T+DG +A +I + H TLFAT
Sbjct: 656 STFMVEMSEANHAIQKASSRSLIIFDELGRGTATYDGMALAQAIIEYVHDHIGAKTLFAT 715
Query: 673 HFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
H+HE+ L + NV V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE
Sbjct: 716 HYHELTDLDEALDHLDNVHVATLEQNGNVTFLHKITEGPADKSYGIHVAKIAGLPQPLLE 775
Query: 733 QARDLMKEYE 742
+A ++++ E
Sbjct: 776 RADLILQKLE 785
>gi|326389401|ref|ZP_08210968.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
gi|325994406|gb|EGD52831.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
Length = 867
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 194/692 (28%), Positives = 340/692 (49%), Gaps = 67/692 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T Y E+ + + I + +P E + ++L +NK + I +N
Sbjct: 137 GICAVDVTTGDLYATELKNCKDIKRVYDEITKYAPSEIIANEDFLKNNK--YIKIF-KNN 193
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
C + + E+ ++ + EL + P M + L +L +YL+ +
Sbjct: 194 NCAVNIYEKQLDYEEKIKLIETQFNKKSEEL-GIKDKPYMA-----NSLAALFSYLQELQ 247
Query: 210 NE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
++N+ I+ + + Y+ + S + +L +L + S + SLLG+LD+ TP G
Sbjct: 248 KTALKHINKLLIY--EDNSYMGLDSNAIKNLEILESNRNKSKKG--SLLGVLDKTVTPMG 303
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL +W+++PL + + I R AV L N+ + R +L ++ L + D++ LA +I +
Sbjct: 304 GRLLKKWLEEPLLNKEHIDARLEAVEELFNDYKNRQDLKQF-LNKIYDLERLASKIVYQS 362
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK----MMDR------ 377
KD + + LP + ILE + L I +L+ ++D+
Sbjct: 363 INPKDFISIKLSLQNLPYIKEILEKFNSRL----LKEICEKFDTLQDIYELIDKSIKDDP 418
Query: 378 ----------KDAVMDKMKEYLESTARRLNLVAD------KTIKLENSPQG----FAYRI 417
KD + + + +++ N +A+ + ++N G F Y I
Sbjct: 419 STQLKEGNIIKDGYNETVDKLRKASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYI 478
Query: 418 TMKLNN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIVEE 470
+ +N + +RY T+ R+ L + + I+ EY+ + + E
Sbjct: 479 EVTKSNIPQVPERYIRKQTLANAERYVTPELKEIEETILGAEEKLIELEYQLFNE--IRE 536
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
+ + Q + +A DVL+SF A Y++P + + +V+ + RHP
Sbjct: 537 KVELQIVRIQNT---AKYIATIDVLISF--AEVAETNRYIKPIVD--YSDRIVIKEGRHP 589
Query: 531 IVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
++E S++ ND+ E ++TGPNM GKSTY+R + + V +AQIG FVP A
Sbjct: 590 VIETISDESFVANDIDI-GPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYA 648
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
I +VD+IFTRVGA+D + G STFM+EM E A ++K T SL+I+DE+GRGTST+DG
Sbjct: 649 KIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGM 708
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
+A ++ + + TLFATH+HE+ L + RN VS E+ED+++ L ++ PG
Sbjct: 709 SIAHAVIEYIHEKIKAKTLFATHYHELTKLEGKMRGVRNYNVSVEEREDDIIFLRKIVPG 768
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+ +K+AG P ++E+A++++ E
Sbjct: 769 GADKSYGIQVSKLAGLPYSIVERAKEILNSLE 800
>gi|404378841|ref|ZP_10983919.1| DNA mismatch repair protein MutS [Simonsiella muelleri ATCC 29453]
gi|294483331|gb|EFG31017.1| DNA mismatch repair protein MutS [Simonsiella muelleri ATCC 29453]
Length = 848
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 291/579 (50%), Gaps = 44/579 (7%)
Query: 192 TTATHCLRSLINYLELMNNE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSA 249
+ A +L+NYL++ N+ +M+ ++ S ++++ + +A +L + + S
Sbjct: 227 SAAISAAGALLNYLKITQNQLPPHMDALTLES--ETQFIALDAATRRNLEI---TATLSG 281
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
Q+ +L +LD C T G RLLA W+ PL++ D I R AVN L+N+ ++ +
Sbjct: 282 QSAPTLFSVLDECVTHMGSRLLANWLHHPLRNHDHIQARLDAVNSLLNHDVESIS---GS 338
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL----ISILESLVQ-----NVEAS 360
L+ + D++ +A RI A +D + + + L ++ S+L++L A
Sbjct: 339 LKKIADIERIAARIALGSARPRDLSALRDSLLNLMEIRLPESSLLDTLAACFPETQAVAE 398
Query: 361 NLNTILSSLQSLKMMD--------RKDAVMDKMK-------EYLES-TARRLNLVADKTI 404
L L S+ + D KD +D+++ ++L AR T+
Sbjct: 399 LLQAALLPEPSVWLKDGDVINHQYNKD--LDELRHLQTHGDDFLRDLEARERERTQLSTL 456
Query: 405 KLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
K+E N GF ++ + Y T++ RF L ++ A Q +
Sbjct: 457 KVEFNRVHGFYIELSKNQSEQAPSDYQRRQTLKNAERFITPELKAFEDKFLAAQEKALAL 516
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
++ + E+++G + Q + A DVL SF A T K Y P G +
Sbjct: 517 EKILFEQLLGSLKDALPRIQQTAKAAATLDVLCSF--AHTAQTKNYAMPTFS--HDGEID 572
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
+ RHP+VE Q + PN+ + + + L+TGPNMGGKSTY+R I + V LA G
Sbjct: 573 IENGRHPVVE-QQVTRFTPNNTHLNATQ-KLCLLTGPNMGGKSTYMRQIALIVLLAHTGS 630
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP SA I +DQIFTR+GA+D STFM+EM ETA ++ T SLV++DE+GRG
Sbjct: 631 FVPAKSAKIGKIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATAQSLVLMDEVGRG 690
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
TSTFDG +A +IA L Q LFATH+ E+ L PT N +SALEQ ++V
Sbjct: 691 TSTFDGLALAHAIAEHLLMKNQSLCLFATHYFELTKLPEHYPTAFNQHLSALEQGQDIVF 750
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ V+ G+ KSYG+ AK+AG P+ L+ A+ +K E
Sbjct: 751 LHDVQDGAAEKSYGIAVAKLAGLPQRALKTAQKQLKLLE 789
>gi|303253454|ref|ZP_07339596.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248649|ref|ZP_07530663.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302647698|gb|EFL77912.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854860|gb|EFM87049.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 864
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 205/697 (29%), Positives = 343/697 (49%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+P N EA+ + + LLPAE L IL+ K
Sbjct: 142 AIATLDMTSGRFLITELP------NKEALAAEL---QRLLPAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S V + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTVLLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QKEQRIEPLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D R+ ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTRLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLERAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLVLEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 MQLAAMALSELDVLTN--LAERAESLNYVRPTFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TENSLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KKTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
>gi|116333843|ref|YP_795370.1| DNA mismatch repair protein MutS [Lactobacillus brevis ATCC 367]
gi|122269470|sp|Q03R33.1|MUTS_LACBA RecName: Full=DNA mismatch repair protein MutS
gi|116099190|gb|ABJ64339.1| DNA mismatch repair protein MutS [Lactobacillus brevis ATCC 367]
Length = 892
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 278/529 (52%), Gaps = 56/529 (10%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G RLL QW+ +PL D I R A V L+++ R +L E ++ +
Sbjct: 278 TLLWLLDETKTAMGGRLLKQWLDRPLIDRQQIENRQARVAALLDHYFERNSLQEELVK-V 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS-- 371
D++ LA R+ +D ++ + Q+P++ +E L + V +T L+ L
Sbjct: 337 YDLERLAGRVAFGSVNGRDLIQLQTSLEQVPQIQHTIEELDEPV----FDTTLAGLDPVS 392
Query: 372 ---------------LKMMDR---KDAVMDKMKEY-------------LESTARRLNLVA 400
L + D +D ++ EY LE+ R + +
Sbjct: 393 DVADAIRAAIVPEPPLSVADGGVIRDGFNAQLDEYRDAMRNGKTWLAELEAHEREVTGIN 452
Query: 401 DKTIKLENSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATAN-----TQYQ 454
+ I N G+ +T + L+ DRY T+ RF L + +
Sbjct: 453 NLKIGY-NHVFGYYIEVTKVNLSKLPADRYERKQTLTNAERFSTPELKEKERLILEAEEK 511
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
++ EY+ VE + A T+ L +L+ V+A DVL SF++ S +V+P
Sbjct: 512 SVALEYKL----FVELREQVKAAITR-LQKLAAVIASLDVLQSFAVVSE--DYHFVQP-- 562
Query: 515 KPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIG 573
K + L + Q RHP+VE + G SY+PNDV + + L+TGPNM GKSTY+R +
Sbjct: 563 KLVSGHQLKITQGRHPVVEKVLGRQSYVPNDVTMDD-QTNILLITGPNMSGKSTYMRQLA 621
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
++V +AQ+GCFVP ++A + + DQIFTR+GAAD G STFM+EM+E + T NS
Sbjct: 622 LTVIMAQMGCFVPAEAAEMPIFDQIFTRIGAADDLISGQSTFMVEMQEANRALSHATANS 681
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVS 693
L++ DE+GRGT+T+DG +A +I + + TLF+TH+HE+ L + +NV V
Sbjct: 682 LILFDEIGRGTATYDGMALAQAIIEYVHNRVHAKTLFSTHYHELTALDESLKQLKNVHVG 741
Query: 694 ALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
A+E++ +LV L+Q++PG KSYG+H AK+AG P +L++A ++ + E
Sbjct: 742 AVERDGDLVFLHQMQPGPADKSYGIHVAKLAGMPTKLLQRAEVILTDLE 790
>gi|113477122|ref|YP_723183.1| DNA mismatch repair protein MutS [Trichodesmium erythraeum IMS101]
gi|123160394|sp|Q10YG4.1|MUTS_TRIEI RecName: Full=DNA mismatch repair protein MutS
gi|110168170|gb|ABG52710.1| DNA mismatch repair protein MutS [Trichodesmium erythraeum IMS101]
Length = 901
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 296/617 (47%), Gaps = 61/617 (9%)
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
L+ YLE E+ + + S + ++ + +L + S Q SLL ++
Sbjct: 285 GLLEYLEETQKENQVPLQRLRSYTLADFLILDHQSRRNLEITQTVRDGSYQ--GSLLSVV 342
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D+ T G R L +W++QPL L I RH ++ L+ N + R ++ LR + D++ L
Sbjct: 343 DKTSTAMGGRALRRWLQQPLLSLKGIRARHDTIDELIQNNDLRQDIQR-VLRQIYDLERL 401
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLP------------------KLISILESLVQNVEASN 361
R G A +D + + +++LP K+ IL+ L + + +
Sbjct: 402 TGRTGAGTANARDLVFLADSLTKLPELSTFVSQGNSPYLKVLQKIPPILQELGKKIHS-- 459
Query: 362 LNTILSSLQSLK--------MMDRKDAVMDKMKE-------YLESTARRLNLVADKTIKL 406
N + S Q LK + +R D M K+ E LE+T R + + +
Sbjct: 460 -NLVESPSQKLKEGGLIRPGINERLDE-MRKLAEEDQKWIASLETTERERTGIPNLKVGY 517
Query: 407 ENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
N G+ I+ N D YT T+ R+ + L + Q + +
Sbjct: 518 -NKAFGYYISISKSKANLAPDDYTRKQTLTNEERYITEELKEREVRILTAQDDLNELEYD 576
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
I ++ Y + + +S +A D+L +A + YVRP M + + L + +
Sbjct: 577 IFVDLRNEVGEYAEEIRNVSRAVAALDILCG--LADVAIYQNYVRPTM--VDSRELKIIE 632
Query: 527 CRHPIVE--LQGGVSYIPNDVYFKSGEVSFN-------------LVTGPNMGGKSTYIRS 571
RHP+VE L G ++PN S + N ++TGPN GKS Y+R
Sbjct: 633 GRHPVVEKYLPAGF-FVPNTAILGSKNLEKNNSGITPYSAPDLIILTGPNASGKSCYLRQ 691
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
+G+ +AQIG FVP SA + V D+IFTRVGA D G STFM+EM ETA ++ TE
Sbjct: 692 VGLIQLMAQIGSFVPASSAVLGVSDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATE 751
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
SLV++DE+GRGT+TFDG +A S+A LA+ T+FATH+HE+ LS ++ N Q
Sbjct: 752 KSLVLLDEIGRGTATFDGISIAWSVAEYLATEILSRTIFATHYHELNELSSILDNVANYQ 811
Query: 692 VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
V+ E D +V L+QV+PG KSYG+ ++AG P+ ++ +AR +M++ E
Sbjct: 812 VTVKELPDKIVFLHQVQPGGADKSYGIEAGRLAGLPDSVIARARQVMQQIENHSKIAIGL 871
Query: 752 GDETNNREEEYFKTVQE 768
N +EEE TV++
Sbjct: 872 RKGINKKEEEEIITVEQ 888
>gi|307246524|ref|ZP_07528596.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255510|ref|ZP_07537316.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259961|ref|ZP_07541674.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306852587|gb|EFM84820.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861552|gb|EFM93540.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865989|gb|EFM97864.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 864
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 205/697 (29%), Positives = 343/697 (49%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+P N EA+ + + LLPAE L IL+ K
Sbjct: 142 AIATLDMTSGRFLITELP------NKEALAAEL---QRLLPAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S V + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTVLLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QKEQRIEPLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D R+ ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTRLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLERAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 MQLAAMALSELDVLTN--LAERAESLNYVRPTFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TENSLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KKTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
>gi|344996159|ref|YP_004798502.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964378|gb|AEM73525.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
Length = 863
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 265/528 (50%), Gaps = 50/528 (9%)
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
+SLLGILDR +T G RLL +W+++PL D+ I R +V L +N + + E R
Sbjct: 277 NSLLGILDRTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKSNYSILVQIEELLSR- 335
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL 372
+ D++ L+ + K KD + + LP L +L S A L I L +L
Sbjct: 336 MYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSF----SAQLLKEIYEGLDTL 391
Query: 373 K------------------------------MMDRKDAVMDKMKEYL-ESTARRLNLVAD 401
+ +DR + KE L + + NL
Sbjct: 392 EDIYALIDSSINEDAPVTLKEGGIIKDGFNEEVDRLRNISKNSKELLVQYEEKERNLTGI 451
Query: 402 KTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQ-YQAIQRE 459
K +++ N G+ +T + + DRY T+ R+ + L + A Q+
Sbjct: 452 KNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLANAERYITEELKKLEDEILGADQKL 511
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP--CMKPM 517
E Q E I A + + + + +A DVL SF A YVRP C+
Sbjct: 512 IELEYQLFCEIRDRIEAQ-IERIQKTASYIAILDVLCSF--ARIAIDNEYVRPNVCL--- 565
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
+ + RHP+VE + G ++IPND E ++TGPNM GKSTY+R + + V
Sbjct: 566 -GDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGPNMAGKSTYMRQVALIV 624
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+GCFVP D A I +VD+IF+R+GA+D G STFM+EM E A ++K T SL+I
Sbjct: 625 IMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMSEVANILKNATPKSLII 684
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSA 694
DE+GRGTST+DG +A ++ +A + TLFATH+HE+ L IP +N +V
Sbjct: 685 FDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVKNYRVDV 744
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
E+ N++ L ++ G C SYG+H A++AG PE++L++A +++K+ E
Sbjct: 745 KEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAGEILKQLE 792
>gi|270308389|ref|YP_003330447.1| DNA mismatch repair protein [Dehalococcoides sp. VS]
gi|270154281|gb|ACZ62119.1| DNA mismatch repair protein [Dehalococcoides sp. VS]
Length = 858
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 213/721 (29%), Positives = 350/721 (48%), Gaps = 96/721 (13%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
++ G+A D+ T +F ++ + LEA I + +P E ++P K++ + +
Sbjct: 135 DSCGLAFADISTSEFGCTQLD----INGLEAEINRLNPAEIIMP-------KSQSLNLPP 183
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
K ++ F DV R E +N L A +L+NYLE
Sbjct: 184 HLKATISKLDGYYFE-----ADVARERLLKHFECQNLSAYGCENLPLAVSAAGALLNYLE 238
Query: 207 LMNNED--NMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRT 264
+ + S+++I S Y+ + S +S+L + G S + SLLG+LD+ +T
Sbjct: 239 GTQKSSLKQLERLSVYTI--SDYMQIDSHTLSNLEIFRSSGGNSLK--GSLLGVLDQTKT 294
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG 324
G RLL +++ QPL + I +R +AV+ + AR +L + +L + DM+ +A RI
Sbjct: 295 AMGGRLLRKFLGQPLLRQEDIEKRLSAVDYFFEESLARASLAK-SLGQIADMERIANRIR 353
Query: 325 RK----------------------KAGLKDCYR-VY--EGVSQLPKLISILESLVQNVEA 359
+K + GL R VY G+ LP+++ I+ + +
Sbjct: 354 QKTILPKELISLKHSLEIVSAIHRQFGLMPPPRLVYFLNGLKPLPEMLDIINEAISDDPP 413
Query: 360 SNLN---TILSSLQSLKMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLENSPQGFAY 415
S L I S MD+ ++ + +L + AR K++KL + + F Y
Sbjct: 414 STLGEGKVIRSGFNP--EMDKLCSLAGDARTFLSQMEAREREQTGIKSLKLGYN-RVFGY 470
Query: 416 RITMKLNN--SIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIG 473
I + N I Y T+ RF L +EYE + E ++
Sbjct: 471 YIEVSNANLADIPQNYIRKQTLVNAERFITPEL-----------KEYENLILNAKERLLE 519
Query: 474 ISAG-YTQTLNQL----------SDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
+ G Y Q LNQL + VLA DVL +F A YVRP P SL
Sbjct: 520 METGLYEQVLNQLGGFYSVLLSNAAVLASLDVLSAF--AEVAVRNGYVRPVFHP--ENSL 575
Query: 523 VLNQCRHPIVELQ-GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 581
+++ RHP+VE G S++ ND+ + + ++TGPNM GKSTY++ + V +AQI
Sbjct: 576 AIHRGRHPMVEQGLGHGSFVANDISLSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQI 635
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
G +VP ++A + + D+IF+R+GA + G STFM+EM ETA+++ T SL+I+DE+G
Sbjct: 636 GSYVPAETAELCLTDRIFSRIGAREDLSAGQSTFMVEMVETASILNSATSRSLLILDEIG 695
Query: 642 RGTSTFDGFGMACSIARELASHRQPF----TLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
RGTST+DG +A ++ + H QP TLFATH+HE+ ++ +P +N ++ E
Sbjct: 696 RGTSTYDGLAIAQAVVEYI--HSQPSLNAKTLFATHYHELVEMANYLPRVKNYNIAVSED 753
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L+++ PG KSYG+H AK+AG P+ ++++A +++ E E P+ + N
Sbjct: 754 RGEVVFLHKIVPGGVDKSYGIHVAKLAGMPKWVIKRAYEVLTELE------NPAKKQPKN 807
Query: 758 R 758
R
Sbjct: 808 R 808
>gi|422825315|ref|ZP_16873494.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK678]
gi|324995817|gb|EGC27728.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK678]
Length = 849
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/643 (29%), Positives = 312/643 (48%), Gaps = 64/643 (9%)
Query: 159 EFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFS 218
E E+ L +N L+ + + L + +LL E L+ Y+ + +
Sbjct: 181 EAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVHRTQMRELSHLKK 240
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+ ++ M A +SL + + S + + SL ++D +T G R+L W+++P
Sbjct: 241 AQHYEIKDFLQMDYATKASLDL--TENGRSGKKHGSLYWLMDETKTAMGGRMLRSWIQRP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D I +R V + +++ R +L E +L+G+ D++ LA R+ K KD ++
Sbjct: 299 LIDEARISQRQNVVEVFLDHFFERSDLME-SLKGVYDIERLASRVSFGKTNPKDLLQLAA 357
Query: 339 GVSQLPKLISILES--------LVQNVEA-SNLNTILSSLQSL----------------- 372
+ +P++ +IL+ L++ ++ L ++SS S
Sbjct: 358 TLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAISPDAPHIITEGNIIRTGFD 417
Query: 373 KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRY 429
+ +D+ V+ + + LE R + +++ I N G+ + +T + +
Sbjct: 418 ETLDQYRLVLREGTGWIAELEVKERANSSISNLKIDY-NKKDGYYFHVTNSQLTHVPSHF 476
Query: 430 TILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAG 477
T++ RF + LA +AN +Y+ R I EE +
Sbjct: 477 FRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGK 524
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQG 536
Y Q L L+ LA DVL SF A+ + VRP L + + RH +VE + G
Sbjct: 525 YIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPVFT--AERRLQIEKGRHAVVEKVMG 580
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
SYIPN + + L+TGPNM GKSTY+R + + V +AQ+G +VP SA++ + D
Sbjct: 581 AQSYIPNSILLDQ-KTDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVPAQSASLPLFD 639
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+T+DG +A +I
Sbjct: 640 AIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTATYDGMALAQAI 699
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ + TLFATH+HE+ L + NV V+ LE++ + L++++PG KSY
Sbjct: 700 IEHIHHYTGAKTLFATHYHELTALEDSLEHLENVHVATLEKDGQVTFLHKIEPGPADKSY 759
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNRE 759
G+H AK+AG PE +LE+A ++ E S DT S +R+
Sbjct: 760 GIHVAKIAGLPEKLLERADSILSHLE-SQDTALGSELPAESRQ 801
>gi|312865859|ref|ZP_07726081.1| DNA mismatch repair protein MutS [Streptococcus downei F0415]
gi|311098734|gb|EFQ56956.1| DNA mismatch repair protein MutS [Streptococcus downei F0415]
Length = 853
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 191/689 (27%), Positives = 327/689 (47%), Gaps = 68/689 (9%)
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTI 144
L G++ +DL T +FY + D ++ + + I KE +L
Sbjct: 134 LDGIYGLSYMDLSTGEFYATSLTD---FTAVRSEIQNLKAKEVVL--------------- 175
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL-PEMCLTTATHCLRSLIN 203
G N+ EE L + +N L+ + ++ +L+ P++ + A L+
Sbjct: 176 ---------GFDLNDKQEEALTKQMNLLLSPEKEVYEDVQLIGPDLSIVEA-QAAGKLLQ 225
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
Y+ + + + + ++ M+ A +SL +L + + +++ + SL +LD +
Sbjct: 226 YVHTTQKRELSHLQGLVHYEIKDFLQMTYATKTSLDLL--ENARTSKKHGSLFWLLDATK 283
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
T G RLL W+ +PL + I+ R V ++N R +L + +L+G+ D++ LA R+
Sbjct: 284 TAMGMRLLRTWIDRPLVSREKILGRQEIVQTFLDNFFERSDLTD-SLKGVYDIERLASRV 342
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL----------- 372
KA KD ++ +SQ+PK+ +IL S + LN + +L L
Sbjct: 343 SFGKANPKDLLQLGHTLSQVPKIKAILASFASPI-LDQLNEAIDALPELESLIVSALDQD 401
Query: 373 ----------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE-NSPQGFA 414
+ +D VM + ++ E A+ T+K++ N G+
Sbjct: 402 APATITEGGMIKTGFDQQLDHYRQVMREGTTWIAEIEAKERAASGISTLKIDYNRKDGYY 461
Query: 415 YRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
+ +T + + D + T++ RF LA + T + I V
Sbjct: 462 FHVTNSNLSLVPDHFFRKATLKNSERFGTAELAKIEGDMLEAREHSATLEYDIFMTVRNQ 521
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
Y Q L L+ +A D L S ++ + YVRP + + RH +VE
Sbjct: 522 VEKYIQRLQDLAKNIATVDALQSLAVVAEN--NHYVRPQFNDQEV--IDIQDGRHAVVEK 577
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G YIPN + + + L+TGPNM GKSTY+R + ++V +AQIG FV +SA +
Sbjct: 578 VMGTQEYIPNTITLDQ-DTAIQLITGPNMSGKSTYMRQLALTVVMAQIGSFVAAESANLP 636
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ D I+TR+GAAD G STFM+EM E I++ + SL++ DELGRGT+T+DG +A
Sbjct: 637 IFDAIYTRIGAADDLISGQSTFMVEMMEANMAIQRASSQSLILFDELGRGTATYDGMALA 696
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
+I + T FATH+HE+ LS + NV V+ LE++ ++ L+++ G
Sbjct: 697 QAIIEHIHDQVGAKTFFATHYHELTELSTSLTHLVNVHVATLEKDGDVTFLHKITAGPAD 756
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYGVH AK+AG P+D+L++A ++ + E
Sbjct: 757 KSYGVHVAKIAGLPKDLLQRATKILTDLE 785
>gi|392940989|ref|ZP_10306633.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
gi|392292739|gb|EIW01183.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
Length = 867
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 200/688 (29%), Positives = 342/688 (49%), Gaps = 59/688 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T Y E+ + + I + +P E + ++L +NK + I +N
Sbjct: 137 GICAVDVTTGDLYATELKNCKDIKRVYDEITKYAPSEIIANEDFLKNNK--YIKIF-KNN 193
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
C + + E+ ++ + EL L + L +L +YL+ +
Sbjct: 194 NCAVNIYEKQLDYEEKIKLIETQFNKKSEELGIKDKL------YMANSLATLFSYLQELQ 247
Query: 210 NE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
++N+ I+ + + Y+ + S + +L +L + S + SLLG+LD+ TP G
Sbjct: 248 KTALKHINKLLIY--EDNSYMGLDSNAIKNLEILESNRNKSKKG--SLLGVLDKTVTPMG 303
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL +W+++PL + + I R AV L N+ + R +L ++ L + D++ LA +I +
Sbjct: 304 GRLLKKWLEEPLLNKEHIDARLEAVEELFNDYKNRQDLKQF-LNKIYDLERLASKIVYQS 362
Query: 328 AGLKDCYRVYEGVSQLPKLISILES----LVQNV--EASNLNTILSSL-QSLK------- 373
KD + + LP + ILE L++ + + L I + +S+K
Sbjct: 363 INPKDFISIKLSLQNLPYIKEILEKFNSRLLKEICEKFDTLQDIYELIDKSIKDDPSTQL 422
Query: 374 -----MMDRKDAVMDKM-KEYLESTARRLNLVADKTIK--LENSPQG----FAYRITMKL 421
+ D + +DK+ K E NL A++ K ++N G F Y I +
Sbjct: 423 KEGNIIKDGYNETVDKLRKASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTK 482
Query: 422 NN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIVEEVIGI 474
+N + +RY T+ R+ L + + I+ EY+ + + E + +
Sbjct: 483 SNIPQVPERYIRKQTLANAERYVTPELKEIEETILGAEEKLIELEYQLFNE--IREKVEL 540
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVEL 534
Q + +A DVL+SF A Y++P + + +V+ + RHP++E
Sbjct: 541 QIVRIQNT---AKYIATIDVLISF--AEVAETNRYIKPIVDY--SDRIVIKEGRHPVIET 593
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
SY+ ND+ E ++TGPNM GKSTY+R + + V +AQIG FVP A I +
Sbjct: 594 ISDESYVANDIDI-GPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGI 652
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
VD+IFTRVGA+D + G STFM+EM E A ++K T SL+I+DE+GRGTST+DG +A
Sbjct: 653 VDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGMSIAH 712
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
++ + + TLFATH+HE+ L + RN VS E+ED+++ L ++ PG K
Sbjct: 713 AVIEYIHEKIKAKTLFATHYHELTKLEGKMRGVRNYNVSVEEREDDIIFLRKIVPGGADK 772
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+ +K+AG P ++E+A++++ E
Sbjct: 773 SYGIQVSKLAGLPYSIVERAKEILNSLE 800
>gi|302391923|ref|YP_003827743.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM
5501]
gi|302204000|gb|ADL12678.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM
5501]
Length = 893
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 195/699 (27%), Positives = 335/699 (47%), Gaps = 67/699 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +D+ T F E+ ++ SNL + + +P ECL+ K +++T +++
Sbjct: 139 GIATIDISTGDFSTTELTGEEAQSNLIDELARINPAECLVDTNLYE--KTEVITYINQQL 196
Query: 150 VCMTGRKKNEFSEE---DLMQD---VNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
+ K F+ DL+ D VN L F +LK +T A L LI
Sbjct: 197 DPIINEIKERFNYSQAYDLLIDHFEVNSLDGFGCEDLK-------FAVTAAGAVLDFLIE 249
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD-SLLGILDRC 262
+ ++NQ + +S Y+ + + +L + + Q+Y SLL +LD+
Sbjct: 250 TQK--RTLGHLNQLTTYST--KDYMTLDANTRRNLELTK---TIRDQSYKGSLLWVLDQT 302
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
T G R L +W++QPL D++ I R AV L +N + L + L + D++ L +
Sbjct: 303 VTAMGGRKLQKWLEQPLLDVEGINNRLDAVGELKDNIFLKEELKD-NLTEVYDLERLMSK 361
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK--------- 373
I A +D + ++ LP + + L+ E+S L + L +L+
Sbjct: 362 ITYGSANARDLIALKTSIANLPAI----KELLTQFESSKLKSAADKLDTLEDVHELIESS 417
Query: 374 -------MMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE----------------NSP 410
+ D + E L+ + +N D LE N
Sbjct: 418 IKEEPPTTVTEGDIIKTGYDEELDEFRQAMNEGKDWIANLEKEEKERTGIKSLKVGFNKV 477
Query: 411 QGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEE 470
G+ +T + + D Y T+ R+ L ++ + + + + E
Sbjct: 478 HGYYIEVTKANLDLVPDNYERKQTLSNSERYITPELKEKESKILGAEEKSVELEYQLFTE 537
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
+ A T+ + +++D++AQ DVL S +A Y P + + + + RHP
Sbjct: 538 IREKVAQETERVQKVADIVAQLDVLAS--LAEVAINNNYCHPEVN--ASDVIDIEDGRHP 593
Query: 531 IVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
+VE + S++PND Y + F ++TGPNM GKSTY+R + + V ++QIG F+P D
Sbjct: 594 VVEEMLEEESFVPNDSYIDCDQDRFLIITGPNMSGKSTYMRQVALMVLMSQIGSFIPADE 653
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A I +VD+IFTRVGA+D G STFM+EM E A ++ T+NSLVI+DE+GRGTST+DG
Sbjct: 654 AKIGIVDRIFTRVGASDDLTTGQSTFMVEMNEVANILNNATQNSLVILDEVGRGTSTYDG 713
Query: 650 FGMACSIARELA--SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
+A ++ ++ S+ +LFATH+HE+ L +P +N V+ E+ ++ L ++
Sbjct: 714 LSIAWAVTEYISDQSNIGAKSLFATHYHELTELESKLPGVKNYNVAVKEEGSDITFLRKI 773
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
PG SYG+ AK AG P+ ++++A +++++ E +D
Sbjct: 774 VPGKANDSYGIEVAKRAGVPKSVIDRANEVLEKLETEID 812
>gi|228992457|ref|ZP_04152385.1| DNA mismatch repair protein mutS [Bacillus pseudomycoides DSM
12442]
gi|228767278|gb|EEM15913.1| DNA mismatch repair protein mutS [Bacillus pseudomycoides DSM
12442]
Length = 906
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 281/543 (51%), Gaps = 48/543 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL D I ER V VN+ R +L E L+ +
Sbjct: 294 SLLWLLDKTKTAMGGRMLKQWMERPLIQKDNIEERLEMVETFVNDYFLREDLKE-KLKEV 352
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 353 YDLERLAGKVAYGNVNARDLLQLRRSLLQVPAILEAI-SLLDNSYAARLIQGADPCESLT 411
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 412 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 471
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L+ + RY T+ RF D L T + + +Q
Sbjct: 472 IGYNRIFGYYIEVTKANLSALPEGRYERKQTLANAERFVTDELKEKETLILEAEEKIVQL 531
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ +++ E + + + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 532 EYDLF--TVLREEVKV---FIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TD 582
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 583 KREIFIKDGRHPVVEKVLNGKLYVPNDCMMPENMDVF-LITGPNMSGKSTYMRQLALITV 641
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 642 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 701
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 702 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLEQLKNVHVSAIEE 761
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 762 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 821
Query: 758 REE 760
+EE
Sbjct: 822 QEE 824
>gi|333978769|ref|YP_004516714.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822250|gb|AEG14913.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
Length = 868
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 208/714 (29%), Positives = 341/714 (47%), Gaps = 65/714 (9%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYL-NDNKNKIVTIL 145
N G+A+VD+ T F + +I D L +++ P E LLP L + + + L
Sbjct: 133 NAYGLAVVDVTTGLFMVTQI---DGRDALLDELIRLEPAEVLLPDIPLYRELAGAVKSRL 189
Query: 146 DRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC-LTTATHCLRSLINY 204
+ + E E VR +L + L A C ++NY
Sbjct: 190 PKAVISFWSPAAFERGEA---------VRSLQEQLGTGWTRSGLSGLPLAILCAGGMLNY 240
Query: 205 LELMNNED--NMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
L+ + +N+ I+S +Y+H+ +L + S + +LL +LD
Sbjct: 241 LKATQKRELGQINRVEIYS--GGQYMHLDGVTRRNLELTSSLRDGS--RWGTLLWVLDHT 296
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
T G RLL W+++PL D+ AI R AV LVN++ AR L ++ L+ + D++ L+ R
Sbjct: 297 VTAMGGRLLKSWLERPLLDVQAIRARQDAVEELVNDSLARQEL-QHLLKTIYDLERLSSR 355
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEASNLNTILSSLQSL------ 372
+ AG +D + ++ LPK+ +L L Q + A +L+ + +Q L
Sbjct: 356 VVYGTAGPRDLLALKNSLAVLPKVKKVLCNKKAPLWQEI-AGDLDCLEDVVQLLDEAIDA 414
Query: 373 -----------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE-NSPQGF 413
+DR + K +L + AR +++K+ N G+
Sbjct: 415 DPPAGSREGGIIREGYHPEVDRLRQASREGKNWLAQLEAREKERTGIRSLKVGFNKVFGY 474
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIG 473
+T + + Y T+ G RF L Q + + + E+
Sbjct: 475 YLEVTRPNLDLVPADYIRKQTLAGAERFITPELKELEEQILGAEERLVQLEYRLFTEIRE 534
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS-LVLNQCRHPIV 532
A + + Q + +A+ D L S+A YVRP + GS + + + RHP+V
Sbjct: 535 KVAAQVRRIQQAAGAVARTDAL--LSLAEAAVKGNYVRP---EVNDGSRITIREGRHPVV 589
Query: 533 E--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
E L+ G ++PNDV G+ L+TGPNM GKSTY+R + + V +AQ+G F+P S
Sbjct: 590 EQVLEPG-EFVPNDVDL-GGDTRLILLTGPNMAGKSTYMRQVALLVLMAQVGSFIPAASG 647
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
I +VD+IFTRVGA+D G STFM+EM E ++ T SL+I+DE+GRGTST+DG
Sbjct: 648 EIGIVDRIFTRVGASDDLAAGQSTFMVEMSECQVIVSAATPRSLIIMDEVGRGTSTYDGI 707
Query: 651 GMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
+A ++ + TLF+TH+HE+ L V+P +N V+ E+ +++V L +V+PG
Sbjct: 708 SIARALVEYIVRRIGARTLFSTHYHELTELD-VLPGVKNFTVAVEERGEDVVFLRRVRPG 766
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG---DETNNREEE 761
+SYG+ A++AG P ++L++A +++ E EY D S D +REE+
Sbjct: 767 RADRSYGIQVARLAGLPGEILQRAEEILHELEYRRDGGAVSPAPRDLPAHREEK 820
>gi|407693422|ref|YP_006818211.1| DNA mismatch repair protein MutS [Actinobacillus suis H91-0380]
gi|407389479|gb|AFU19972.1| DNA mismatch repair protein MutS [Actinobacillus suis H91-0380]
Length = 858
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 204/697 (29%), Positives = 343/697 (49%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+P N EA+ + + L PAE L IL+ K
Sbjct: 142 AIATLDMTSGRFLITELP------NKEALAAEL---QRLQPAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S + + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTILLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ L + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QKEQRIELLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D R+ ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTRLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLERAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 MQLAAMALSELDVLTN--LAERAESLNYVRPTFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TENSLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KKTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
>gi|422824605|ref|ZP_16872792.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK405]
gi|422856698|ref|ZP_16903354.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1]
gi|422863626|ref|ZP_16910257.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK408]
gi|422866538|ref|ZP_16913163.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1058]
gi|324992654|gb|EGC24575.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK405]
gi|327460057|gb|EGF06396.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1]
gi|327472203|gb|EGF17640.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK408]
gi|327488647|gb|EGF20447.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1058]
Length = 849
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 184/638 (28%), Positives = 311/638 (48%), Gaps = 66/638 (10%)
Query: 159 EFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFS 218
E E+ L +N L+ + + L + +LL E L+ Y+ + +
Sbjct: 181 EAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVHRTQMRELSHLKK 240
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+ ++ M A +SL + + S + + SL ++D +T G R+L W+++P
Sbjct: 241 AQHYEIKDFLQMDYATKASLDL--TENGRSGKKHGSLYWLMDETKTAMGGRMLRSWIQRP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D I +R V + +++ R +L E +L+G+ D++ LA R+ K KD ++
Sbjct: 299 LIDEARISQRQNVVEVFLDHFFERSDLME-SLKGVYDIERLASRVSFGKTNPKDLLQLAA 357
Query: 339 GVSQLPKLISILES--------LVQNVEA-SNLNTILSSLQSL----------------- 372
+ +P++ +IL+ L++ ++ L ++SS S
Sbjct: 358 TLGNVPQIKAILQGIGSPHLARLIEGLDPIPELAGLISSAISPDAPHIITEGNIIRTGFD 417
Query: 373 KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRY 429
+ +D+ V+ + + LE R + +++ I N G+ + +T + +
Sbjct: 418 ETLDQYRLVLREGTGWIAELEVKERANSSISNLKIDY-NKKDGYYFHVTNSQLTHVPSHF 476
Query: 430 TILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIGISAG 477
T++ RF + LA +AN +Y+ R I EE +
Sbjct: 477 FRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE----AGK 524
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQG 536
Y Q L L+ LA DVL SF A+ + VRP L + + RH +VE + G
Sbjct: 525 YIQRLQALAQTLAAVDVLQSF--AAVAEQQHLVRPVFT--AERRLQIEKGRHAVVEKVMG 580
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
SYIPN + + L+TGPNM GKSTY+R + + V +AQ+G +VP SA++ + D
Sbjct: 581 AQSYIPNSILLDQ-KTDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVPAQSASLPLFD 639
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+T+DG +A +I
Sbjct: 640 AIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTATYDGMALAQAI 699
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ + TLFATH+HE+ L + NV V+ LE++ + L++++PG KSY
Sbjct: 700 IEHIHHYTGAKTLFATHYHELTALEDSLEHLENVHVATLEKDGQVTFLHKIEPGPADKSY 759
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTKTPS 751
G+H AK+AG P+ +LE+A ++ E LD++ P+
Sbjct: 760 GIHVAKIAGLPKKLLERADSILSHLESQGTGLDSELPA 797
>gi|229000593|ref|ZP_04160133.1| DNA mismatch repair protein mutS [Bacillus mycoides Rock3-17]
gi|229006015|ref|ZP_04163704.1| DNA mismatch repair protein mutS [Bacillus mycoides Rock1-4]
gi|228755214|gb|EEM04570.1| DNA mismatch repair protein mutS [Bacillus mycoides Rock1-4]
gi|228759148|gb|EEM08154.1| DNA mismatch repair protein mutS [Bacillus mycoides Rock3-17]
Length = 906
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 281/543 (51%), Gaps = 48/543 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL D I ER V VN+ R +L E L+ +
Sbjct: 294 SLLWLLDKTKTAMGGRMLKQWMERPLIQKDNIEERLEMVETFVNDYFLREDLKE-KLKEV 352
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 353 YDLERLAGKVAYGNVNARDLLQLRRSLLQVPAILEAI-SLLDNSYAARLIQGADPCESLT 411
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 412 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 471
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L+ + RY T+ RF D L T + + +Q
Sbjct: 472 IGYNRIFGYYIEVTKANLSALPEGRYERKQTLANAERFVTDELKEKETLILEAEEKIVQL 531
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ +++ E + + + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 532 EYDLF--TVLREEVKV---FIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TD 582
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 583 KREIFIKDGRHPVVEKVLNGKLYVPNDCMMPENMDVF-LITGPNMSGKSTYMRQLALITV 641
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 642 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 701
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 702 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLERLKNVHVSAIEE 761
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 762 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 821
Query: 758 REE 760
+EE
Sbjct: 822 QEE 824
>gi|222055849|ref|YP_002538211.1| DNA mismatch repair protein MutS [Geobacter daltonii FRC-32]
gi|221565138|gb|ACM21110.1| DNA mismatch repair protein MutS [Geobacter daltonii FRC-32]
Length = 870
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 194/694 (27%), Positives = 335/694 (48%), Gaps = 61/694 (8%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKS---PKECLLPAEYLNDNKNKIVT 143
N G++ +DL T +F + E+ +L+A++ + + P+E LLP+ + ++ K K +
Sbjct: 137 NRWGLSYLDLSTGEFRLTEL------DSLDAVVAEIACVGPREILLPSFFRDNGKMKELA 190
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC--LTTATHCLRSL 201
V ED + D R A C L + + + ++
Sbjct: 191 RATAGLVVT--------HVEDWVYDHEYCRRLLAGHFAGASPSSLGCDGLVSGLYAVGAV 242
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
++YL+ + SI + ++++ + A +L + + SLLG++DR
Sbjct: 243 LHYLQETQKGKAAHVTSIKAYTNAEHLLLDEATRRNLELTATL--AEGKRKGSLLGLMDR 300
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
T G R + QW+ PL I +R AV L+ + +R + L G+ D++ L
Sbjct: 301 TTTAMGGRKIKQWINYPLVTNRGITDRQDAVEALLQDAGSRAEIAAL-LNGVYDLERLNG 359
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK-------- 373
RI AG KD + + ++++P + +L + N+ A LN L+ L L
Sbjct: 360 RISLASAGAKDLVAMKDSLARIPAIKEVLVAFSSNLLAG-LNEGLNPLPELIELIERGIV 418
Query: 374 ------------MMDRKDAVMDKMKEY----------LESTARRLNLVADKTIKLENSPQ 411
+ D +A +D+++ LE+ ++ ++ I+ N
Sbjct: 419 ENPPFVLREGGIIADGYNAELDELRAISREGKGFIARLEAQEKKRTGISSLKIRY-NKVF 477
Query: 412 GFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEV 471
G+ +T +SI Y T+ R+ L + + + S+ +E+
Sbjct: 478 GYYIEVTRTNLDSIPADYIRKQTLANAERYITPELKEYEDKVLGAEDRIRDLEFSLFQEI 537
Query: 472 IGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPI 531
+AG+ + + +D LA DVLVS +A Y RP + GT +L + RHP+
Sbjct: 538 REAAAGHGNLIARTADCLATVDVLVS--LAELAHENNYCRPKVDD-GT-NLAIVDGRHPV 593
Query: 532 VE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
+E L G ++PND + E ++TGPNM GKST++R + + V +A +G FVP A
Sbjct: 594 IEALNQGERFVPNDTLLDNDENQIIVITGPNMAGKSTFMRQVALIVLMAHMGSFVPATEA 653
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
I +VD+IFTRVGA+D+ RG STFM+EM E A +++ T SLVI+DE+GRGTSTFDG
Sbjct: 654 RIGMVDRIFTRVGASDNLARGQSTFMVEMMEAANILRNATPKSLVILDEIGRGTSTFDGV 713
Query: 651 GMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
+A ++A L + + TLFATH+HE+ LS +N ++ E + ++ L ++
Sbjct: 714 SIAWAVAEYLHDNGEHAAKTLFATHYHELTELSVTRRRIKNFNIAVKEWNEQIIFLRKIV 773
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
PG SYG+ A++AG P +++E+A++++ E
Sbjct: 774 PGGASHSYGIQVARLAGLPLEVIERAKEILVNLE 807
>gi|377557385|ref|ZP_09787033.1| DNA mismatch repair protein mutS [Lactobacillus gastricus PS3]
gi|376165652|gb|EHS84599.1| DNA mismatch repair protein mutS [Lactobacillus gastricus PS3]
Length = 862
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 175/565 (30%), Positives = 281/565 (49%), Gaps = 48/565 (8%)
Query: 212 DNMNQFSIHSID-YSKYVHMSSA---VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
D+M + + +D Y K H S A +M+++ +QG+ L ++D +T G
Sbjct: 236 DHMQRAVSYQLDAYMKIDHHSKANLELMTNMRSGKRQGT--------LAWLMDETKTAMG 287
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL QW+++PL D AI+ER V + +++ R NL + L + D++ LA R+
Sbjct: 288 SRLLKQWLERPLIDEQAIIERQDKVQVFLDHYFERQNL-QAELTKVYDLERLAGRVAYGS 346
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNV------EASNLNTILSSLQSL--------- 372
+D ++ + Q+PK+ ILE + + + L I +++
Sbjct: 347 VNGRDLIQLKTSLQQVPKIRYILEEMDSPIFDQFVDQLDPLTDIADAIERAIKDEPPISV 406
Query: 373 ------------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRIT- 418
++ D +DA+ + + + A+ NL +K+ N G+ +T
Sbjct: 407 TDGDLIKDGYHRQLDDYRDAMQNGKQWIADLQAKERNLTGINNLKIGYNHVFGYYIEVTK 466
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGY 478
L+ + RY T+ RF L Q + + + +
Sbjct: 467 ANLDRLPEGRYERKQTLTNAERFSTPELKEREALILEAQEKSTALEYELFVALRDQVKAE 526
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGG 537
L +L+ L++ DVL SF++ S +VRP + +L + RHP+VE G
Sbjct: 527 IPRLQELAKNLSEIDVLQSFAVVSENY--HFVRPTLN--HDHNLEIIAGRHPVVEKFLGH 582
Query: 538 VSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQ 597
+Y+PNDV E + L+TGPNM GKSTY+R + + + Q+GCFVP +SA + + DQ
Sbjct: 583 QAYVPNDVLMDP-ETAILLITGPNMSGKSTYMRQLALIAVMTQVGCFVPAESARMPIFDQ 641
Query: 598 IFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIA 657
IFTR+GAAD G STFM+EM E + T NSL++ DE+GRGT+T+DG +A SI
Sbjct: 642 IFTRIGAADDLVSGESTFMVEMMEANRALSNATANSLILFDEIGRGTATYDGMALAQSII 701
Query: 658 RELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYG 717
+ +H TLF+TH+HE+ L + +NV V A E+ LV L++V G KSYG
Sbjct: 702 EYVHAHIGAKTLFSTHYHELTSLDHELMHLKNVHVGATEENGELVFLHKVTDGPADKSYG 761
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYE 742
+H AK+AG P D+L +A +++ E
Sbjct: 762 IHVAKLAGMPGDLLHRANEILSRLE 786
>gi|347727068|gb|AEP19892.1| DNA mismatch repair protein [Exiguobacterium sp. 11-28]
Length = 841
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 293/554 (52%), Gaps = 42/554 (7%)
Query: 221 SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLK 280
++ Y HM ++ ++ + + S + SLL +LD T G RLL +W++QPL
Sbjct: 236 AVAYEVEAHMQLDANTARNLELFRSARSGERKGSLLALLDETTTAMGGRLLKRWLEQPLY 295
Query: 281 DLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGV 340
AI +R AV LV++ R L E LR + D++ L ++G A +D ++ +
Sbjct: 296 TEQAIRDRQDAVENLVDDFMLRDQLRE-QLRHVYDIERLVAKVGYGTANARDLVQLRNTL 354
Query: 341 SQLPKLISILE----SLVQNVEAS-----NLNTIL-SSLQSLKMMDRKDAVM------DK 384
++P + ++LE S ++ ++A+ +L ++L ++L + K+ M +
Sbjct: 355 ERIPTVRALLEGVTASRLRQIDATLDTFDDLASVLQAALVEAPPISIKEGGMIRAGYSTE 414
Query: 385 MKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSI--DDRYT 430
+ E LE+ A +A+ K++K+ N G+ +T K N + + RY
Sbjct: 415 LDELLEAKANGKTWIANLEQQERLATGIKSLKIGYNRVFGYYLEVT-KANARLLEEGRYE 473
Query: 431 ILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLA 490
T+ R+ L + + T + + + + T+ L QL+ L+
Sbjct: 474 RKQTLTNAERYVTPELKEKEALILGAEEKSCTLEYDLFVALRDLVKQETKPLQQLARSLS 533
Query: 491 QFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE--LQGGVSYIPNDVYFK 548
+ DVL++ +I + YVRP + ++ ++Q RHP++E L G Y+ ND+
Sbjct: 534 ELDVLLALAI--VAEKRDYVRPTT----STNVQIDQGRHPVIETVLPRG-EYVANDLTLD 586
Query: 549 SGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQ 608
L+TGPNM GKSTY+R + L QIG FVP ++A I + D+IFTR+GAAD
Sbjct: 587 DTRRML-LITGPNMSGKSTYMRQFALIAILHQIGSFVPAEAAEIPLFDRIFTRIGAADDL 645
Query: 609 YRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFT 668
G STFM+EM ET + + T +SL+++DE+GRGTST+DG +A +I +AS T
Sbjct: 646 VSGQSTFMVEMTETRQAVTEATAHSLILLDEIGRGTSTYDGMALAQAIVEYIASTIGAKT 705
Query: 669 LFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPE 728
LF+TH+HE+ +L IP NV V A+E++ +V L++V PG KSYG+H A++A P
Sbjct: 706 LFSTHYHELTVLEDTIPALENVHVRAIERDGRVVFLHEVHPGRADKSYGIHVAELAELPR 765
Query: 729 DMLEQARDLMKEYE 742
D++E+AR ++ E E
Sbjct: 766 DLIERARTILSELE 779
>gi|254167004|ref|ZP_04873857.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623860|gb|EDY36422.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 823
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 196/677 (28%), Positives = 327/677 (48%), Gaps = 71/677 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G A +D+ T +F+ GE+ D+Y L A I++ P E L ++ D KI+
Sbjct: 128 GFAALDISTGEFFAGEL---DFYG-LNAEILRLQPSEILSNSKLNLDFPIKILA------ 177
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR--FDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
E+ D ++++ F +EL + E L A L+ Y +
Sbjct: 178 -------------EEYYNDYEKILKEHFKVAELSGFGI-GEYGLMAAASALK----YAKE 219
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
D N S+ KY+ + S + +L + T L +++C TP G
Sbjct: 220 NTMNDLKNITSLQGYFKDKYLILDSTTLKNLEIFHNVLGEDKYT---LYHTMNKCETPMG 276
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL +WM++PLKD+D I +R AV L N + ++ R + D++ + R+ +
Sbjct: 277 ARLLKRWMQRPLKDIDEINDRLDAVEELANKQLLQDSIRTILSR-IKDIERIKTRVSLGR 335
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK-------------M 374
A +D + E + Q KL ES + AS + I ++ ++ +
Sbjct: 336 AVPRDLISLKESLKQADKLRINFESKILKNSASKIYGIEGIIELIENAINGDYPVGEGVI 395
Query: 375 MDRKDAVMDKMKEY----------LESTARRLNLVADKTIKLENSPQGFAYRITMKLNNS 424
+ + +D++K +E RR + + I N G+ ++ +
Sbjct: 396 KEGYNEELDEIKRIASNAKLLIGKMEERERRSTGIKNLKIGY-NDVMGYYIEVSKSNLSK 454
Query: 425 IDDRYTILDTVRGGVRFQDDRLATANTQYQ---AIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ RF D L + +Y+ A R YE + I ++++
Sbjct: 455 VPKHYRRKQTLKNSERFITDELK--DLEYKILSAKDRIYEI-ENKIYKDILKKLGEMIDV 511
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + + +A DV+ S +A Y RP + + + + RHP+VEL ++
Sbjct: 512 IERTAKSIAIIDVISS--LARVALEMNYTRPEVDE--SMDIEIRNGRHPVVELY--TDFV 565
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PND + S F ++TGPNM GKSTY+R + + V LAQ+G FVP D A I +VD+I+TR
Sbjct: 566 PNDTHINSA-ARFIILTGPNMAGKSTYMRQVALIVILAQMGSFVPADYAKIGIVDRIYTR 624
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
VGA+D RG STFMMEM E A ++ TE SL+++DE+GRGTST+DG +A SI +
Sbjct: 625 VGASDDITRGRSTFMMEMVELANILNTATERSLILLDEIGRGTSTYDGLAIAWSITEHIH 684
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
+ + T+FATH+H + L V+ RN ++ E +D L+ + +V PG KSYG+ A
Sbjct: 685 NSIRARTIFATHYHHLIDLENVLDNVRNYHIAVKETQDGLIFVRKVMPGGMSKSYGIEVA 744
Query: 722 KMAGYPEDMLEQARDLM 738
K+AG PE ++++A++++
Sbjct: 745 KLAGVPEKVVKRAKEIL 761
>gi|336053622|ref|YP_004561909.1| DNA mismatch repair protein mutS [Lactobacillus kefiranofaciens
ZW3]
gi|333956999|gb|AEG39807.1| DNA mismatch repair protein mutS [Lactobacillus kefiranofaciens
ZW3]
Length = 865
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 286/586 (48%), Gaps = 61/586 (10%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 224 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHVVQNNLELIA--SAKTGKKMGSLFW 280
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L R N + AL+G+ D++
Sbjct: 281 VLDKTHTAMGGRLLKQWLARPLLNVDQINHREEMVQALFEGYFTRENTID-ALKGVYDLE 339
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNVE-----ASNLNT 364
L RI ++ ++ + +P ++ +LE ++++ A ++T
Sbjct: 340 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSEVLEDYAKDIDPLKGVAEMIST 399
Query: 365 ILSSLQSL-------------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIK--LENS 409
L L K +DR M+ K++L + AD+ K +EN
Sbjct: 400 TLVKDPPLLTTEGGLIQPGVDKQLDRYRDAMNNGKQWLAQ------MEADERQKTGIENL 453
Query: 410 PQG----FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQ 457
G F Y I + N DRYT T+ R+ L Q ++
Sbjct: 454 KVGYNKVFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTD 513
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ + + EEV Y L +L + LA DV F A+ Y RP
Sbjct: 514 LEYDLFVK-LREEV----KKYIPALQKLGNQLAALDVYCGF--ATVAEQNNYCRPTFHTD 566
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
V+N RHP+VE + SYIPNDV S F L+TGPNM GKSTY+R + +
Sbjct: 567 NQDINVVN-GRHPVVEKVMTAGSYIPNDVKMDSATDIF-LITGPNMSGKSTYMRQMALIA 624
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+G FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+
Sbjct: 625 IMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVL 684
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGT+T+DG +A +I + L LFATH+HE+ L + +N+ V A E
Sbjct: 685 FDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTALDETLDHLKNIHVGATE 744
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ L+ L+++ PG +SYG+H A++AG P +L +A L+K E
Sbjct: 745 ENGKLIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLKRLE 790
>gi|419759908|ref|ZP_14286193.1| DNA mismatch repair protein MutS [Thermosipho africanus H17ap60334]
gi|407514947|gb|EKF49733.1| DNA mismatch repair protein MutS [Thermosipho africanus H17ap60334]
Length = 828
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 187/646 (28%), Positives = 328/646 (50%), Gaps = 63/646 (9%)
Query: 163 EDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE--LMNNEDNMNQFSIH 220
ED +++ ++V D EL N +L L +L+ YLE LM+N +
Sbjct: 207 EDKVKETFKIVSIDHFELSNGQL----------RVLGALLKYLEYTLMSN---LALEEPK 253
Query: 221 SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLK 280
++ SK++ + S + +L ++P G YD IL++ +T G RLL +W+ QPLK
Sbjct: 254 KLEESKWMILDSKTVDNLSLIP--GEKGKNLYD----ILNKTKTAMGSRLLKKWILQPLK 307
Query: 281 DLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGV 340
I+ER V+ N+ + EY L G+ D++ + R+ K KD + +
Sbjct: 308 VKKDIIERQEIVDAFFNDRLLLNEIREY-LNGIFDVERILTRLQYGKVSPKDLISLKNTL 366
Query: 341 SQLPKLISILESLVQNVEASN-LNTILSSLQSLKMMDR----------------KDAV-- 381
+P +ILE+L N + S + I + +++++R KD
Sbjct: 367 YIIP---NILEALKTNEKFSKYVQEIEEFPEVVELLERALYEDPSSTVGDGNVIKDGYSP 423
Query: 382 -MDKMKEYLESTARRLNLVADKTIKLENSP-------QGFAYRITMKLN--NSIDDRYTI 431
+D + +L + +L + + N Q F Y I + ++ D Y
Sbjct: 424 ELDDYRNFLFHSEDKLKEFEREERERTNIQKLKVGFNQVFGYYIEVPKGQVKNVPDYYIR 483
Query: 432 LDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQ 491
T+ R+ +L + + + + E ++++ +E+ + Y + + ++ +A+
Sbjct: 484 KQTLVNSERYITQKLKEFEEKIMSAREKVEILEKALFDELTKMILKYVNDIKKTAEKIAE 543
Query: 492 FDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGE 551
DVL +F+ S YV+P ++ + RH +VE + +++PND+Y S
Sbjct: 544 LDVLSTFAYVSQLYG--YVKP---EFDDEKFIVKEARHAVVE-RYVSNFVPNDIYMDSLR 597
Query: 552 VSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRG 611
+ ++TGPNM GKSTYIR +G+ +AQIGCFVP SA + + D+IFTR+GA D G
Sbjct: 598 RMY-IITGPNMSGKSTYIRQVGLIAVMAQIGCFVPAKSAKLPIFDRIFTRMGARDDISTG 656
Query: 612 ISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFA 671
STF++EM E A ++ K T++SLV++DE+GRGTSTFDG +A +++ + + + T+FA
Sbjct: 657 KSTFLVEMSEVALILSKATKDSLVLLDEVGRGTSTFDGISIAWAMSEYIYNEIKCKTIFA 716
Query: 672 THFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDML 731
THF E+ LS V +N+ + E D +V L++V G +SYG+ AK+AG P+ ++
Sbjct: 717 THFTELTELSDVYNGIKNLTIEVEETNDGIVFLHKVVDGVADRSYGIEVAKIAGVPDGVV 776
Query: 732 EQARDLMK--EYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFD 775
E+A+++++ + L+ K E R+ + K V EG+ +F+
Sbjct: 777 ERAKEILEVITKKSELEKKVRVLKEGQLRQIKSRKKVAEGQLTIFE 822
>gi|189424210|ref|YP_001951387.1| DNA mismatch repair protein MutS [Geobacter lovleyi SZ]
gi|254766629|sp|B3E6P2.1|MUTS_GEOLS RecName: Full=DNA mismatch repair protein MutS
gi|189420469|gb|ACD94867.1| DNA mismatch repair protein MutS [Geobacter lovleyi SZ]
Length = 872
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 192/692 (27%), Positives = 331/692 (47%), Gaps = 62/692 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTIL-DRN 148
G A +DL T +F + D + ++ +P+E LLP + D ++ + DR
Sbjct: 140 GCAWLDLSTGEFLTA---NSDNLAGAATLLASIAPRELLLPDQLRRDLPPELALVAGDRP 196
Query: 149 KVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLI------ 202
+ + D + D + + S+ A PEM T +L+
Sbjct: 197 RAAVA----------DWVLDKDYCSKLICSQFGVAS--PEMLGLAVTELSEALLATGMVL 244
Query: 203 NYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRC 262
+YL+ + + + + + ++ + A +L + T + SLLG LDR
Sbjct: 245 HYLQENRHATLPHLRDLTIVRQNDHLALDPATRRNLELTATM--TDNKKSGSLLGCLDRT 302
Query: 263 RTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
T G R L QW+ PL + I R AV L N + L E L+G+ D++ L R
Sbjct: 303 ATAMGARTLKQWLSYPLVQVAPIRRRLEAVEELKENPALQDQLREQ-LKGVHDLERLNGR 361
Query: 323 IGRKKAGLKDCYRVYEGVSQLPKL--------ISILESLVQNVEA-----SNLNTILSSL 369
+ AG +D +++ + Q+P++ +L L + ++ S +N ++
Sbjct: 362 VSMAGAGGRDLRSLHDSLEQVPQIRLALTEATAPLLRDLTEELDPLQDIRSLINQAIAPA 421
Query: 370 QSLKM-------------MDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGF 413
+ +D A+ + K Y +E+ R ++ I+ N G+
Sbjct: 422 PPFSLREGGIIADGYHAELDELRAISREGKGYIARMEAQERDRTGISSLKIRY-NKVFGY 480
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIG 473
+T +S+ D Y T+ G R+ + L + + + + ++ +EV
Sbjct: 481 YIEVTKSNLSSVPDNYIRRQTIATGERYITEELKSYEEKVLGAEDRICELEYTLFQEVRE 540
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE 533
+A +++ + LA DVL S ++ + + Y +P + T ++ + RHP+VE
Sbjct: 541 RTAAQGGRVSRTASALASLDVLASLALVAQ--ERDYCKPVVDDGDTLEII--EGRHPVVE 596
Query: 534 -LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATI 592
+ G ++PND + ++TGPNM GKSTY+R + + +AQ+G FVP ATI
Sbjct: 597 AMNLGERFVPNDTRLDQEQHQLLMITGPNMAGKSTYMRQVALITLMAQVGSFVPASRATI 656
Query: 593 SVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGM 652
+ DQIFTRVGA D+ RG STFM+EM ETA +++ T SLV++DE+GRGTSTFDG +
Sbjct: 657 GIADQIFTRVGAGDNLARGQSTFMVEMMETAHILRSATTKSLVVLDEIGRGTSTFDGLSI 716
Query: 653 ACSIAREL--ASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
A ++A L +H + TLFATH+HE+A L+ N+ V+ E D ++ L + PG
Sbjct: 717 AWAVAEYLHDTNHCKARTLFATHYHELADLAATREGITNLTVAVKEWNDQVIFLRTIIPG 776
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ SYG+ A++AG P +++E+A++++K E
Sbjct: 777 AASHSYGIQVARLAGMPRNVIERAKEVLKTLE 808
>gi|227894650|ref|ZP_04012455.1| MutS protein [Lactobacillus ultunensis DSM 16047]
gi|227863545|gb|EEJ70966.1| MutS protein [Lactobacillus ultunensis DSM 16047]
Length = 866
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 290/580 (50%), Gaps = 49/580 (8%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
+ L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 225 KQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELIA--SAKTGKKMGSLFW 281
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 282 VLDKTHTAMGGRLLKQWLARPLLNVDEINHREEMVQALLDGYFTRENAID-ALKGVYDLE 340
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNVE-----ASNLNT 364
L RI ++ ++ + +P ++ +LE + ++ A ++T
Sbjct: 341 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSDVLEDFAKKIDPLKGVAEMIST 400
Query: 365 ILS------SLQSLKMMDRKDAVMDKMKEYLESTARRL-NLVADKTIK--LENSPQG--- 412
L + + + D D +D+ ++ + + + L + AD+ K +EN G
Sbjct: 401 TLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLAQMEADERQKTGIENLKVGYNK 460
Query: 413 -FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYETH 463
F Y I + N DRYT T+ R+ L Q ++ EY+
Sbjct: 461 VFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLF 520
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+ + EEV Y L +L LA DV F A+ Y RP V
Sbjct: 521 VK-LREEV----KKYIPALQKLGSQLAALDVYCGF--ATVAEQNNYCRPHFHTDNQDIDV 573
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
+N RHP+VE + SYIPNDV +G F L+TGPNM GKSTY+R + + +AQIG
Sbjct: 574 VN-GRHPVVEKVMTAGSYIPNDVKMDTGTDIF-LITGPNMSGKSTYMRQMALIAIMAQIG 631
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVP DSA + V DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE+GR
Sbjct: 632 SFVPADSADLPVFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDEIGR 691
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + L LFATH+HE+ L + +N+ V A E+ L+
Sbjct: 692 GTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTDLDETLDHLKNIHVGATEENGKLI 751
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+++ PG +SYG+H A++AG P +L +A L+K E
Sbjct: 752 FLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLKRLE 791
>gi|260102903|ref|ZP_05753140.1| DNA mismatch repair protein HexA [Lactobacillus helveticus DSM
20075]
gi|417015925|ref|ZP_11946959.1| DNA mismatch repair protein MutS [Lactobacillus helveticus MTCC
5463]
gi|260083292|gb|EEW67412.1| DNA mismatch repair protein HexA [Lactobacillus helveticus DSM
20075]
gi|328462816|gb|EGF34683.1| DNA mismatch repair protein MutS [Lactobacillus helveticus MTCC
5463]
Length = 865
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 286/583 (49%), Gaps = 55/583 (9%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 224 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVA--SAKTGKKMGSLFW 280
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N+ + AL+G+ D++
Sbjct: 281 VLDKTHTAMGGRLLKQWLARPLLNVDIINHREKMVQALLDGYFTRENIID-ALKGVYDLE 339
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNVE-----ASNLNT 364
L RI ++ ++ + +P ++ +L + ++ A ++T
Sbjct: 340 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSDVLTDFAKKIDPLKGVAELIST 399
Query: 365 ILSSLQSL-------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLEN 408
L L K +DR M+ K++L E+ R+ + + +
Sbjct: 400 TLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNK 459
Query: 409 SPQGFAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREY 460
F Y I + N DRYT T+ R+ L Q ++ EY
Sbjct: 460 V---FGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEY 516
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ Q + +EV Y L +L + LA DV SF A+ Y RP
Sbjct: 517 DLFVQ-LRDEV----KKYIPALQKLGNQLAALDVYCSF--ATVAEQNNYCRPSFHTDSQD 569
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
V+N RHP+VE + SYIPNDV S F L+TGPNM GKSTY+R + + +A
Sbjct: 570 IDVVN-GRHPVVEKVMTAGSYIPNDVKMDSATNIF-LITGPNMSGKSTYMRQMALIAIMA 627
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+G FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE
Sbjct: 628 QVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDE 687
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+T+DG +A +I + L LFATH+HE+ L + +N+ V A E+
Sbjct: 688 IGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTSLDETLDYLKNIHVGATEENG 747
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L+++ PG +SYG+H A++AG P +L +A L+K E
Sbjct: 748 KLIFLHKILPGPADQSYGIHVAQLAGLPRTVLREATKLLKRLE 790
>gi|420147621|ref|ZP_14654896.1| DNA mismatch repair protein MutS [Lactobacillus gasseri CECT 5714]
gi|398400768|gb|EJN54299.1| DNA mismatch repair protein MutS [Lactobacillus gasseri CECT 5714]
Length = 857
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 186/613 (30%), Positives = 301/613 (49%), Gaps = 84/613 (13%)
Query: 176 DDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVM 235
DD+E+K + L L+T L L Q + S + ++Y+ MS V
Sbjct: 217 DDAEIKATKQLVAYLLSTQKRSLAHL--------------QVA-QSYEPTQYLQMSHTVQ 261
Query: 236 SSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNIL 295
++L ++ + + +++ SL +LD+ T G RLL W+++PL + I R V L
Sbjct: 262 TNLELI--KSAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLSVTEITRRQEMVQAL 319
Query: 296 VNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI-SILES-- 352
+++ R + + +L+G+ D++ L RI ++ ++ + +P ++ S+LE+
Sbjct: 320 LDDYFTREKVID-SLKGVYDLERLTGRIAFGSVNAREMLQLAHSLGAIPDILNSLLETNN 378
Query: 353 -----------LVQNVEASNLNTILSSLQSL------------KMMDRKDAVMDKMKEYL 389
++ + +NTI+ + L +DR M+ K++L
Sbjct: 379 PHLQNFAKQIDPLKGIHDLIVNTIVDNPPLLTTEGGLIREGVSDQLDRYRDAMNNGKKWL 438
Query: 390 ---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID-DRYTILDTVRGGVRFQDDR 445
ES R + + + + N G+ +T + + DRYT T+ R+
Sbjct: 439 SEMESHEREVTGINNLKVGY-NKVFGYYIEVTNSNKDKVPTDRYTRKQTLTNAERY---- 493
Query: 446 LATANTQYQAIQREYETHQQSIVEEVIGISAG---------------YTQTLNQLSDVLA 490
I + + H+ S++ E S G Y L +L+ +A
Sbjct: 494 ----------ITPDLKEHE-SLILEAEAKSTGLEYDLFVKLRENVKKYIPALQKLAKQVA 542
Query: 491 QFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKS 549
DVL +F A+ YVRP K V+N RHP+VE + SYIPNDV
Sbjct: 543 SLDVLTNF--ATVSEQNNYVRPDFKVDKQEINVVN-GRHPVVEQVMTAGSYIPNDVKMDQ 599
Query: 550 GEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQY 609
F L+TGPNM GKSTY+R + + +AQIGCFVP DSAT+ + DQIFTR+GAAD
Sbjct: 600 DTDIF-LITGPNMSGKSTYMRQMALIAIMAQIGCFVPADSATLPIFDQIFTRIGAADDLI 658
Query: 610 RGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTL 669
G STFM+EM E ++ T+ SLV+ DE+GRGT+T+DG +A +I + L TL
Sbjct: 659 SGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTL 718
Query: 670 FATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
FATH+HE+ L + + +N+ V A E+ L+ L+++ PG +SYG+H A++AG P
Sbjct: 719 FATHYHELTDLDQTLKHLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPHK 778
Query: 730 MLEQARDLMKEYE 742
+L +A ++K E
Sbjct: 779 VLREATTMLKRLE 791
>gi|302342734|ref|YP_003807263.1| DNA mismatch repair protein MutS [Desulfarculus baarsii DSM 2075]
gi|301639347|gb|ADK84669.1| DNA mismatch repair protein MutS [Desulfarculus baarsii DSM 2075]
Length = 858
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 262/522 (50%), Gaps = 40/522 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +DR +P G RLL QW+ PL +L+ + RH AV+ L + AR L + AL +
Sbjct: 286 SLLQAVDRTLSPMGGRLLKQWLGFPLLELERVEARHQAVDELTRDLAARDGLRQ-ALEAM 344
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL--------ISILESLVQNVE-----AS 360
PD+ L R +AG ++ + + + LP++ +L +++E A
Sbjct: 345 PDVPRLVGRASLGQAGPRELAGLRQALRALPEVRRRLAGFAAPLLRRAAESLEGLEPLAV 404
Query: 361 NLNTILSSLQSLKMMDRK------DAVMDKMKEY----------LESTARRLNLVADKTI 404
L L+ S + D D +D++++ L+++ R + I
Sbjct: 405 ELERALAESPSQALGDGGVIAEGFDQELDQLRQLGGQGKDWIAALQASLRAETGIGSLKI 464
Query: 405 KLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
N G+ +T + + + T+ R+ L + + +
Sbjct: 465 GF-NRVFGYYIEVTTAHQAKVPEHFIRKQTLATAERYFTPELKEKEAAVLGAEEKALELE 523
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ + +E+ + A ++ L LA DVL ++ A + Y RP M G+L +
Sbjct: 524 RRLFDELRALVAAWSGRLMDCGRALAMVDVLAAW--ADLAVSQDYARPLMSQ--NGALCI 579
Query: 525 NQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
Q RHP+VE L G ++PNDV G ++TGPNM GKST +R + + LAQ G
Sbjct: 580 EQGRHPVVEQMLAAG-EFVPNDVLLDDGAQQVIIITGPNMAGKSTILRQVALICLLAQAG 638
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVP A + +VD++FTRVGA D RG STFM+EM ETA ++K T SLV++DE+GR
Sbjct: 639 SFVPAARAELPLVDRVFTRVGAMDDLARGRSTFMVEMTETAQILKNATPRSLVVLDEVGR 698
Query: 643 GTSTFDGFGMACSIAREL--ASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GTSTFDG +A ++A L R TLFATH+HE+ L+ +P RN V+ E
Sbjct: 699 GTSTFDGLSLAWAVAEALHDLQGRGVKTLFATHYHELTELADKLPRVRNYNVAVREHRGE 758
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L ++ PG +SYG+ A++AG PED+L +AR+++ E
Sbjct: 759 VVFLRRLAPGGVSRSYGLQVARLAGLPEDVLRRAREVLARLE 800
>gi|301055259|ref|YP_003793470.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|423550481|ref|ZP_17526808.1| DNA mismatch repair protein mutS [Bacillus cereus ISP3191]
gi|300377428|gb|ADK06332.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|401190097|gb|EJQ97147.1| DNA mismatch repair protein mutS [Bacillus cereus ISP3191]
Length = 892
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E D P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEDIVIPKRVEVKA 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|269121342|ref|YP_003309519.1| DNA mismatch repair protein MutS [Sebaldella termitidis ATCC 33386]
gi|268615220|gb|ACZ09588.1| DNA mismatch repair protein MutS [Sebaldella termitidis ATCC 33386]
Length = 868
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 191/686 (27%), Positives = 339/686 (49%), Gaps = 48/686 (6%)
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLP---AEYLNDNKNKI 141
L N G+A +D+ T +F + EI DD YS + + PKE L+ E L D +
Sbjct: 132 LDNKTGIAYLDITTGEFKVLEIEDDSDYSKTFNELYKIEPKEILVEFNFYEALKDKFDDY 191
Query: 142 VTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
+D +KV + + ++ E+ + D +V + + A+ A H +
Sbjct: 192 SKKID-SKVTLVNKLRDP---ENFLTDYFNIVSLESFGISEAK--------AAVHAAGMI 239
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
++Y M + ++ I I+ + + ++S +L + Q ++ Y +LL +LD+
Sbjct: 240 LDYALSMQVDGDLPLEKIEYINITNFAEINSTTRRNLELTRNQREKTS--YGTLLWVLDK 297
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
C+T G R L + + PL +++ I +R + ++N R + E L + D++ LA
Sbjct: 298 CKTSMGTRFLKKIINNPLLEIEEIKKRQDDLQYFMDNILIREEIKE-KLGEVYDLERLAG 356
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILE--SLVQNVEASNLNTILSSLQ-SLKM---- 374
+I KD + + + +++ L + ++ L I ++ S+K
Sbjct: 357 KIVLGNENGKDLTALKKSIISSLEIMDFLRETAFFTGIDTKTLTQIRDIIEESIKEDAPF 416
Query: 375 ---------------MDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE-NSPQGFAYRI 417
+D +M K+YL E AR K +K++ N G+ +
Sbjct: 417 SIREGNIIKRGYNQELDEIFKIMSSGKDYLLEIEAREKERTGIKNLKIKYNKVFGYFLEV 476
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
+ + + + Y T+ R+ + L + + + E + + +E+ G
Sbjct: 477 SNSNKDLVPEDYIRKQTLSNAERYITEELKEYEDKIINSKSKVEEIEYYLFKEISGKIKE 536
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQG 536
+ LN+LS++LA DV++SF++ T YVRP + + + + RHP+VE L G
Sbjct: 537 KREVLNKLSEILAYLDVIISFAV--TAIENNYVRPEF--VDDYVIEIEEGRHPVVEKLIG 592
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
++ N+V E +F ++TGPNM GKSTY++ IG+ LAQIG +VP SA +S+VD
Sbjct: 593 REDFVSNNVRMDR-EGNFIILTGPNMAGKSTYMKQIGLIQILAQIGSYVPAQSARLSIVD 651
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
+I TR+GAAD G STFM+EM E + +I TE SL+I+DE+GRGTSTFDG +A +I
Sbjct: 652 KILTRIGAADDIVSGQSTFMVEMSEVSNIINSATERSLIILDEVGRGTSTFDGISIATAI 711
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ + T+FATH+HE+ L + N ++ E+ +++V L ++ G KSY
Sbjct: 712 TEYIHDKIKAKTIFATHYHELTELEEKFDSILNYRIEVEERSNSVVFLRKIVRGGADKSY 771
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
G+ A++AG P+++L ++ +++ E
Sbjct: 772 GIEVARLAGLPKEVLLNSKKILRGLE 797
>gi|345017667|ref|YP_004820020.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033010|gb|AEM78736.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 867
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 201/688 (29%), Positives = 341/688 (49%), Gaps = 59/688 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T Y E+ + + I + +P E + ++L +NK V I +N
Sbjct: 137 GICAVDVTTGDLYATELKNCKDTKRVYDEITKYAPSEIIANEDFLKNNK--YVKIF-KNN 193
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
C + + E+ ++ + EL + P M + L +L +YL+ +
Sbjct: 194 NCAINIYEKQLDYEEKIKLIETQFNKKSEEL-GIKDKPYMA-----NSLAALFSYLQELQ 247
Query: 210 NE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
++N+ I+ + + Y+ + S + +L +L + S + SLLG+LD+ TP G
Sbjct: 248 KTALKHINKLLIY--EDNSYMGLDSNAIKNLEILESNKNKSKKG--SLLGVLDKTVTPMG 303
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL +W+++PL + + I R AV L N+ + R +L + L + D++ LA +I +
Sbjct: 304 GRLLKKWLEEPLLNKEHIDARLQAVEELFNDYKNRQDLKQL-LNKIYDLERLASKIVYQS 362
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNV--EASNLNTILSSL-----QSLK------- 373
KD + + LP + ILE + E IL + +S+K
Sbjct: 363 INPKDFISIKLSLQNLPYIKEILEKFNSRLLKEICEKFDILQDIYELIDKSIKDDPSTQL 422
Query: 374 -----MMDRKDAVMDKM-KEYLESTARRLNLVADKTIK--LENSPQG----FAYRITMKL 421
+ D + +DK+ K E NL A++ K ++N G F Y I +
Sbjct: 423 KEGNIIKDGYNETVDKLRKASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTK 482
Query: 422 NN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIVEEVIGI 474
+N + +R+ T+ R+ L + + I+ EY+ + + E + +
Sbjct: 483 SNIPQVPERFIRKQTLANAERYVTPELKEIEETILGAEEKLIELEYQLFNE--IREKVEL 540
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVEL 534
Q + +A DVL+SF A Y++P + + +V+ + RHP++E
Sbjct: 541 QIVRIQNT---AKYIAIIDVLISF--AEVAETNRYIKPIVDY--SDRIVITEGRHPVIET 593
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
S++ ND+ S E ++TGPNM GKSTY+R + + V +AQIG FVP A I +
Sbjct: 594 ISDESFVANDIDIGS-ENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGI 652
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
VD+IFTRVGA+D + G STFM+EM E A ++K T SL+I+DE+GRGTST+DG +A
Sbjct: 653 VDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGMSIAH 712
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
++ + + TLFATH+HE+ L + RN VS E+ED+++ L ++ PG K
Sbjct: 713 AVIEYIHEKIKAKTLFATHYHELTKLEGKMKGVRNYNVSVEEREDDIIFLRKIVPGGADK 772
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+ +K+AG P ++E+A++++ E
Sbjct: 773 SYGIQVSKLAGLPYSIVERAKEILNSLE 800
>gi|315037642|ref|YP_004031210.1| DNA mismatch repair protein MutS [Lactobacillus amylovorus GRL
1112]
gi|325956127|ref|YP_004286737.1| DNA mismatch repair protein MutS [Lactobacillus acidophilus 30SC]
gi|312275775|gb|ADQ58415.1| DNA mismatch repair protein MutS [Lactobacillus amylovorus GRL
1112]
gi|325332692|gb|ADZ06600.1| DNA mismatch repair protein MutS [Lactobacillus acidophilus 30SC]
Length = 866
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 289/586 (49%), Gaps = 61/586 (10%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 225 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVA--SAKTGKKMGSLFW 281
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 282 VLDKTHTAMGGRLLKQWLARPLLNVDEINHREEMVQALLDGYFTRENAID-ALKGVYDLE 340
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNVE-----ASNLNT 364
L RI ++ ++ + +P ++ +LE Q ++ A ++T
Sbjct: 341 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSQVLEDFAQKIDPLKGVAEMIST 400
Query: 365 -------ILSSLQSL------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIK--LENS 409
IL++ L K +DR M+ K++L + AD+ K ++N
Sbjct: 401 TLVKDPPILTTEGGLIREGVDKQLDRYKDAMNNGKKWLAQ------MEADERQKTGIDNL 454
Query: 410 PQG----FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQ 457
G F Y I + N DRYT T+ R+ L Q ++
Sbjct: 455 KVGYNKVFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTD 514
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ + + EEV Y L +L LA DV F A+ Y RP
Sbjct: 515 LEYDLFVK-LREEV----KKYIPALQKLGGQLAALDVYCGF--ATVAEQNNYCRPHFHTD 567
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
V+N RHP+VE + SYIPNDV S F L+TGPNM GKSTY+R + +
Sbjct: 568 NQDIDVVN-GRHPVVEKVMTAGSYIPNDVKMDSATNIF-LITGPNMSGKSTYMRQMALIA 625
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+G FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+
Sbjct: 626 IMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVL 685
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGT+T+DG +A +I + L LFATH+HE+ L + +N+ V A E
Sbjct: 686 FDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTALDETLDHLKNIHVGATE 745
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ L+ L+++ PG +SYG+H A++AG P +L +A L+K E
Sbjct: 746 ENGKLIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLKRLE 791
>gi|329904402|ref|ZP_08273796.1| DNA mismatch repair protein MutS [Oxalobacteraceae bacterium
IMCC9480]
gi|327548006|gb|EGF32745.1| DNA mismatch repair protein MutS [Oxalobacteraceae bacterium
IMCC9480]
Length = 889
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 273/547 (49%), Gaps = 50/547 (9%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
+G ++ +L +LD CRT G RLL W+ D RHAA++ L+ + +A
Sbjct: 304 RGQDASAAAPTLFSLLDHCRTTMGSRLLRHWLHHARHDQQVARNRHAAIDALIRSDQA-A 362
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+LH L +PD++ + RI A +D V G+ QLP L L + + + L
Sbjct: 363 DLHR-TLGAVPDIERITTRIALLSARPRDLAGVRGGLQQLPALRDSLLACQRTGPVALLQ 421
Query: 364 TILSSLQS----LKMMDRK-------------------DAVMDKMK-------EYL---E 390
+I ++ + L +++R DA +D+++ +YL E
Sbjct: 422 SIHDAMATPSACLDLIERAIAPEPAAMVRDGGVIARGFDAALDELRGLSENAGQYLVDLE 481
Query: 391 STARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATAN 450
+ R +A+ ++ N GF +T + + D Y T++ R+ L
Sbjct: 482 TRERARTGIANLRVEY-NKVHGFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFE 540
Query: 451 TQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS----TCAP 506
+ + Q + ++ + E+++ A + TL +++ +AQ D L + + + CAP
Sbjct: 541 DKALSAQDRALSREKILYEQLLLDLAPHIGTLQEIAHAVAQLDTLAALAEHARRHDWCAP 600
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
+ P + + Q RHP+VE +I ND L+TGPNMGGKS
Sbjct: 601 QLVAEPAISIL--------QGRHPVVE-NMIERFIANDCLLDDAH-RLLLITGPNMGGKS 650
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TY+R + + LA +G +VP SATI +D+IFTR+GAAD G STFM+EM E+A ++
Sbjct: 651 TYMRQVALITLLAYVGSYVPAASATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAIL 710
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
T SLV++DE+GRGTSTFDG +A +IAR L + FTLFATH+ E+ L V +
Sbjct: 711 NGATAQSLVLMDEVGRGTSTFDGLALAWAIARHLIDTTRSFTLFATHYFELTQLPDVHAS 770
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
NV +SA+E +D +V L+ V+ G +SYG+ A++AG P+ ++ AR + E
Sbjct: 771 ATNVHLSAIEHKDRIVFLHAVQEGPASQSYGLQVAQLAGVPQPVIRAARKHLALLEAQSV 830
Query: 747 TKTPSGD 753
TP D
Sbjct: 831 QSTPQFD 837
>gi|241894950|ref|ZP_04782246.1| DNA mismatch repair protein [Weissella paramesenteroides ATCC
33313]
gi|241871668|gb|EER75419.1| DNA mismatch repair protein [Weissella paramesenteroides ATCC
33313]
Length = 878
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 279/532 (52%), Gaps = 54/532 (10%)
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
Q +LL +LD +T G R L QW++QPL D D +++R+ + L+ + R L E A
Sbjct: 275 QRSGTLLWLLDETKTAMGGRALKQWLEQPLLDADILMQRYDKIGELIEDFFGRSALQE-A 333
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV---------EAS 360
L+ + D++ LA R+ A +D ++ + Q+P +++IL L + +
Sbjct: 334 LQSVYDLERLAGRVAYGTANGRDLLQLRNSLRQVPDILAILADLDPAIFGELHSQIDPVA 393
Query: 361 NLNTILSSLQSL-------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVA 400
++ T++S +S+ + +D +M K +L E A
Sbjct: 394 DIETLIS--ESITDEPPISVTDGGVIRAGYDEQLDSYRDIMTNGKSWLAELEAHEREETG 451
Query: 401 DKTIKLE-NSPQGFAYRITMKLNNSID-DRYTILDTVRGGVRF-------QDDRLATANT 451
++K+ N G+ +T +D +RYT T+ RF ++ + A +
Sbjct: 452 INSLKIGFNKVFGYYIEVTKANIPKLDPERYTRKQTLVNAERFITPELKEREQMILEAES 511
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
+ ++ + T + I+++ I Q + L+ LAQ DV+ S +A+ +VR
Sbjct: 512 KSSELEYQLFTKVRQIIKDNI-------QRIQTLAANLAQLDVIQS--LATVAEKYHFVR 562
Query: 512 PCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
P + T + + RHP+VE + G SY+ NDV + + L+TGPNM GKSTY+R
Sbjct: 563 PTLTDEQT--IAIKDGRHPVVEKVLGHQSYVANDVDMQQDDTIL-LITGPNMSGKSTYMR 619
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
+ + V +AQIG FVP AT+ + DQIFTR+GAAD G STFM+EM E T ++ T
Sbjct: 620 QLALIVVMAQIGSFVPASEATLPIFDQIFTRIGAADDLISGNSTFMVEMSEANTALQNAT 679
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNV 690
++SL++ DELGRGT+T+DG +A +I + H Q TLF+TH+HE+ L+ + RNV
Sbjct: 680 KHSLILFDELGRGTATYDGMALAQAIIEYVHQHTQAKTLFSTHYHELTALADELTALRNV 739
Query: 691 QVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V A E+ L+ ++V PG +SYG++ AK+AG PE ++++A ++ E
Sbjct: 740 HVGATEEHGELIFSHKVLPGPADQSYGINVAKLAGLPETLIKRAAKILANLE 791
>gi|429740457|ref|ZP_19274142.1| DNA mismatch repair protein MutS [Porphyromonas catoniae F0037]
gi|429160893|gb|EKY03337.1| DNA mismatch repair protein MutS [Porphyromonas catoniae F0037]
Length = 883
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 291/574 (50%), Gaps = 39/574 (6%)
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
+++NYLEL ++ + + ++ SID + + S SL +L S + SLL +L
Sbjct: 238 AILNYLELTSHNELGHITTLRSIDRLGTMRLDSFTFRSLEILQ---PMSYEGGKSLLDVL 294
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D TP G RLL W+ PL +L I R V LV + E R L E+ + G+ D++ +
Sbjct: 295 DATVTPMGGRLLRHWLSFPLIELPEIHRRQQVVAALVRDAELRRTLGEHMM-GIGDLERM 353
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISIL-----ESLVQNVE--ASNLNTILSSLQSL 372
A ++ + ++ + + ++ S+L E L + E +N IL Q+L
Sbjct: 354 ASKVALGRISPRETRVIAHSLRSTAQITSLLSKAEGEELHRMAERFETNEEIILDIEQTL 413
Query: 373 -------------------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQG 412
+ +D + K+YL R + A +K+ N+ G
Sbjct: 414 IDEPPIALGRGAVIASGVNEELDELRNLSSHGKDYLVHLQDRESRKAGIPLKIAFNNVFG 473
Query: 413 FAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVI 472
+ + + S+ + +T T+ G R+ L + + + + E+I
Sbjct: 474 YYVEVRSQHTKSVPETWTRKQTLVGAERYIFPELKEYEEKILGAEERIAAIEARLYSELI 533
Query: 473 GISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIV 532
+ + Q L + + LA+ D L+SF AS YV P + GT L + Q RHP++
Sbjct: 534 ARLSRHIQLLQRNARTLAELDCLISF--ASCAEANRYVCPVVDE-GT-VLDIKQGRHPVI 589
Query: 533 E--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSA 590
E L G SY+PNDV+ E ++TGPNM GKS +R + LAQIG FVP ++A
Sbjct: 590 EKQLPFGESYVPNDVHLDQKETQIMVITGPNMSGKSALLRQTALITLLAQIGSFVPAEAA 649
Query: 591 TISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGF 650
I +VD IFTRVGA+D+ RG STFM+EM+E A+++ ++ SL++ DELGRGTST+DG
Sbjct: 650 HIGLVDGIFTRVGASDNISRGESTFMVEMQEAASILNNLSDRSLILFDELGRGTSTYDGI 709
Query: 651 GMACSIARELASHR--QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
+A +I L +R +P TLFATH+HE+ L + +N VSA E E ++ L ++
Sbjct: 710 SIAWAIIEYLHDNRHGRPKTLFATHYHELNDLENRLERVKNFNVSAREIEGKMLFLRKLI 769
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
PG S+G+ A++ G P+ + ++A +++ + E
Sbjct: 770 PGGSEHSFGIQVARLGGMPQSITQRATEILVQLE 803
>gi|228928819|ref|ZP_04091851.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830626|gb|EEM76231.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 886
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 281/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ NV A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNVYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|409387689|ref|ZP_11239869.1| DNA mismatch repair protein MutS [Lactococcus raffinolactis 4877]
gi|399205246|emb|CCK20784.1| DNA mismatch repair protein MutS [Lactococcus raffinolactis 4877]
Length = 853
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 176/611 (28%), Positives = 312/611 (51%), Gaps = 46/611 (7%)
Query: 172 LVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMS 231
L+ FD+++L + L ++ ++ A+ L+NY+ + ++ + ++ M
Sbjct: 207 LIGFDNADLIDYSL-SDLEISVAS----KLLNYVVTTQKRHLTHLQAVQHYEIKDFLLMD 261
Query: 232 SAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAA 291
+A SL +L Q + + + + SL +LD +T G R+L W+ +PL + AI +R
Sbjct: 262 AASKKSLDLL--QNARTGKKHGSLYWLLDETKTAMGTRMLRFWIDRPLVSVSAIQKRLTI 319
Query: 292 VNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL- 350
+ +++ R +L E L+G+ D++ LA R+ KA KD ++ +S +P + +L
Sbjct: 320 IQTFLDHFFERSDLTE-TLKGVYDIERLASRVSFGKANPKDLLQLANTLSNVPAIKGVLT 378
Query: 351 ----ESLVQNVEASN-----LNTILSSLQ---SLKMMDR---KDAVMDKMKEY------- 388
+ L Q +E + L I S++ S + + K+ + EY
Sbjct: 379 EMKADVLTQLIEQLDPMPDLLELITSAIDPNASATITEGNIIKNGFNTTLDEYRVIMRDG 438
Query: 389 ------LESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQ 442
LE+ R + + + I N G+ + +T + D + T++ R+
Sbjct: 439 TTWIAELEAKERENSGINNLKIDY-NKKDGYYFHVTNSNREQVPDHFFRKATLKNSERYG 497
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+ L+ +Q + + + + +V + + + +L+ +A+ DVL S ++ +
Sbjct: 498 TETLSRLESQMLDARENSASLEYDLFLQVRDQTETFIARIQKLAKTIAEIDVLQSLAVVA 557
Query: 503 TCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
Y++P + G ++N RH +VE + G Y+PN + F + E L+TGPN
Sbjct: 558 EN--NHYIQPDIIKNGQEIQIIN-GRHAVVEKVMGAQEYVPNSIEFDA-ETMIQLITGPN 613
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
M GKSTY+R + ++V + QIG F+P + + + D IFTR+GAAD G STFM+EM E
Sbjct: 614 MSGKSTYMRELALTVVMTQIGSFIPAEQVQLPIFDAIFTRIGAADDLISGQSTFMVEMME 673
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
I++ T+NSL++ DELGRGT+T+DG +A +I + H TLFATH+HE+ L
Sbjct: 674 ANHAIRRATKNSLILFDELGRGTATYDGIALAQAIVEYIHEHVGAKTLFATHYHELVTLE 733
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY 741
+ +NV V+ LE + L++++PG KSYG+H AK+AG P +L++A+ ++ E
Sbjct: 734 NSLQHLKNVHVATLEANGEVTFLHKIEPGPADKSYGIHVAKIAGLPSPLLKRAKVILSEL 793
Query: 742 EY---SLDTKT 749
E L TKT
Sbjct: 794 EVDTPKLQTKT 804
>gi|229086318|ref|ZP_04218496.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-44]
gi|228697013|gb|EEL49820.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-44]
Length = 886
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 279/543 (51%), Gaps = 48/543 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAYGNVNARDLLQLRRSLLQVPAILEAI-SLLDNSYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R + K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKREREITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TD 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCVMPENMDMF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLEQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E N
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVNV 799
Query: 758 REE 760
+EE
Sbjct: 800 QEE 802
>gi|422883110|ref|ZP_16929559.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK49]
gi|332363702|gb|EGJ41482.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK49]
Length = 849
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 187/648 (28%), Positives = 312/648 (48%), Gaps = 72/648 (11%)
Query: 159 EFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFS 218
E E+ L +N L+ + + L + +LL E L+ Y+ + +
Sbjct: 181 EAEEQVLAGQMNLLLSYVQTALDDVQLLGEELSPMERQAAGKLLEYVHRTQMRELSHLKK 240
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+ ++ M A +SL + + + S + + SL ++D +T G R+L W+++P
Sbjct: 241 AQHYEIKDFLQMDYATKASLDL--TENARSGKKHGSLYWLMDETKTAMGGRMLRSWIQRP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D I +R V + +++ R +L E +L+G+ D++ LA R+ K KD ++
Sbjct: 299 LIDEARISQRQNVVEVFLDHFFERSDLTE-SLKGVYDIERLASRVSFGKTNPKDLLQLAA 357
Query: 339 GVSQLPKLISILESLVQNVEASNLNTILSSLQSL-------------------------- 372
+ +P++ +IL Q + +S+L ++ L +
Sbjct: 358 TLVNVPQIKAIL----QGIGSSHLARLIEGLDPIPELAGLISSAISPDAPHIITEGNIIR 413
Query: 373 ----KMMDRKDAVMDKMKEY---LESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSI 425
+ +D+ V+ + + LE R + +++ I N G+ + +T +
Sbjct: 414 TGFDETLDQYRLVLREGTGWIAELEVKERANSGISNLKIDY-NKKDGYYFHVTNSQLAHV 472
Query: 426 DDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIG 473
+ T++ RF + LA +AN +Y+ R I EE
Sbjct: 473 PSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREE--- 521
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE 533
+ Y Q L L+ LA DVL SF A+ VRP L + + RH +VE
Sbjct: 522 -AGKYIQRLQALAQTLAAVDVLQSF--AAVAEQLHLVRPVFT--AERCLQIEKGRHAVVE 576
Query: 534 -LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATI 592
+ G SYIPN + E L+TG NM GKSTY+R + + V +AQ+G +VP SA++
Sbjct: 577 KVMGAQSYIPNSILLDQ-ETDIQLITGHNMSGKSTYMRQLAIIVIMAQMGSYVPAQSASL 635
Query: 593 SVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGM 652
+ D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+T+DG +
Sbjct: 636 PLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTATYDGMAL 695
Query: 653 ACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSC 712
A +I + + TLFATH+HE+ L + NV V+ LE++ + L++++PG
Sbjct: 696 AQAIIEHIHHYTGAKTLFATHYHELTALEDSLEHLENVHVATLEKDGQVTFLHKIEPGPA 755
Query: 713 VKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREE 760
KSYG+H AK+AG PE +LE+A +++ E S DT S T +R++
Sbjct: 756 DKSYGIHVAKIAGLPEKLLERADNILSHLE-SQDTGLGSELPTESRQK 802
>gi|385816997|ref|YP_005853387.1| DNA mismatch repair protein MutS [Lactobacillus amylovorus GRL1118]
gi|327182935|gb|AEA31382.1| DNA mismatch repair protein MutS [Lactobacillus amylovorus GRL1118]
Length = 866
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 289/586 (49%), Gaps = 61/586 (10%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 225 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVA--SAKTGKKMGSLFW 281
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 282 VLDKTHTAMGGRLLKQWLARPLLNVDEINHREEMVQALLDGYFTRENAID-ALKGVYDLE 340
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNVE-----ASNLNT 364
L RI ++ ++ + +P ++ +LE Q ++ A ++T
Sbjct: 341 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSQVLEDFAQKIDPLKGVAEMIST 400
Query: 365 -------ILSSLQSL------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIK--LENS 409
IL++ L K +DR M+ K++L + AD+ K ++N
Sbjct: 401 TLVKDPPILTTEGGLIREGVDKQLDRYKDAMNNGKKWLAQ------MEADERQKTGIDNL 454
Query: 410 PQG----FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQ 457
G F Y I + N DRYT T+ R+ L Q ++
Sbjct: 455 KVGYNKVFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTD 514
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ + + EEV Y L +L LA DV F A+ Y RP
Sbjct: 515 LEYDLFVK-LREEV----KKYIPALQKLGGQLAALDVYCGF--ATVAEQNNYCRPHFHTD 567
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
V+N RHP+VE + SYIPNDV S F L+TGPNM GKSTY+R + +
Sbjct: 568 NQDIDVVN-GRHPVVEKVMTAGSYIPNDVKMDSATNIF-LITGPNMSGKSTYMRQMALIA 625
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+G FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+
Sbjct: 626 IMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVL 685
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGT+T+DG +A +I + L LFATH+HE+ L + +N+ V A E
Sbjct: 686 FDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTALDETLDHLKNIHVGATE 745
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ L+ L+++ PG +SYG+H A++AG P +L +A L+K E
Sbjct: 746 ENGKLIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLKRLE 791
>gi|167040248|ref|YP_001663233.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750830|ref|ZP_05491715.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914332|ref|ZP_07131648.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307724432|ref|YP_003904183.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
gi|166854488|gb|ABY92897.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750413|gb|EEU63432.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889267|gb|EFK84413.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307581493|gb|ADN54892.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
Length = 867
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 200/688 (29%), Positives = 341/688 (49%), Gaps = 59/688 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T Y E+ + + I + +P E + ++L +NK + I +N
Sbjct: 137 GICAVDVTTGDLYATELKNCKDTKRVYDEITKYAPSEIIANEDFLKNNK--YIKIF-KNN 193
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
C + + E+ ++ + EL + P M + L +L +YL+ +
Sbjct: 194 NCAINIYEKQLDYEEKIKLIETQFNKKSEEL-GIKDKPYMA-----NSLAALFSYLQELQ 247
Query: 210 NE--DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
++N+ I+ + + Y+ + S + +L +L + S + SLLG+LD+ TP G
Sbjct: 248 KTALKHINKLLIY--EDNSYMGLDSNAIKNLEILESNKNKSKKG--SLLGVLDKTVTPMG 303
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
RLL +W+++PL + + I R AV L N+ + R +L + L + D++ LA +I +
Sbjct: 304 GRLLKKWLEEPLLNKEHIDARLQAVEELFNDYKNRQDLKQL-LNKIYDLERLASKIVYQS 362
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQNV--EASNLNTILSSL-----QSLK------- 373
KD + + LP + ILE + E IL + +S+K
Sbjct: 363 INPKDFISIKLSLQNLPYIKEILEKFNSRLLKEICEKFDILQDIYELIDKSIKDDPSTQL 422
Query: 374 -----MMDRKDAVMDKM-KEYLESTARRLNLVADKTIK--LENSPQG----FAYRITMKL 421
+ D + +DK+ K E NL A++ K ++N G F Y I +
Sbjct: 423 KEGNIIKDGYNETVDKLRKASTEGKNWIANLEAEEREKTGIKNLRIGYNKVFGYYIEVTK 482
Query: 422 NN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIVEEVIGI 474
+N + +R+ T+ R+ L + + I+ EY+ + + E + +
Sbjct: 483 SNIPQVPERFIRKQTLANAERYVTPELKEIEETILGAEEKLIELEYQLFNE--IREKVEL 540
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVEL 534
Q + +A DVL+SF A Y++P + + +V+ + RHP++E
Sbjct: 541 QIVRIQNT---AKYIAIIDVLISF--AEVAETNRYIKPIVDY--SDRIVIKEGRHPVIET 593
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
S++ ND+ S E ++TGPNM GKSTY+R + + V +AQIG FVP A I +
Sbjct: 594 ISDESFVANDIDIGS-ENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGI 652
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
VD+IFTRVGA+D + G STFM+EM E A ++K T SL+I+DE+GRGTST+DG +A
Sbjct: 653 VDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGMSIAH 712
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
++ + + TLFATH+HE+ L + RN VS E+ED+++ L ++ PG K
Sbjct: 713 AVIEYIHEKIKAKTLFATHYHELTKLEGKMKGVRNYNVSVEEREDDIIFLRKIVPGGADK 772
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+ +K+AG P ++E+A++++ E
Sbjct: 773 SYGIQVSKLAGLPYSIVERAKEILNSLE 800
>gi|386714417|ref|YP_006180740.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
gi|384073973|emb|CCG45466.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
Length = 859
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 181/583 (31%), Positives = 290/583 (49%), Gaps = 62/583 (10%)
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHM---SSAVMSSLHVLPQQGSTSAQTYDSLLG 257
L+ Y++L + + ++ ++Y+ + S + + L +QG + SLL
Sbjct: 227 LLQYIQLTQKRSLDHLQPVRVVELNQYMTLDMYSKRNLELVETLRKQGKSG-----SLLS 281
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
++D+ T G R+L +WM++PL AI RH V L++ R L E L + D++
Sbjct: 282 VVDKTITAMGARMLKKWMERPLLTKQAIEARHDQVEGLLDQFFERETLRE-QLTSVYDLE 340
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR 377
LA R+ +D +V + ++P+++ L S + +L + L LK +
Sbjct: 341 RLAGRVAYGNVNARDLIQVRNSLRKIPEILETLGSF-NHPSMKSLYEKIDPLHELKELLE 399
Query: 378 -----------------KDAVMDKMKEYLESTARRLNLVADKTIKLENSPQG-------- 412
+D ++ EY +++ +A + K E G
Sbjct: 400 GSIAEDPPITIKEGGLIQDGFHQQLDEYRDASRNGKQWIA-QLEKKEREATGIRSLKIGY 458
Query: 413 ---FAYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQREYE 461
F Y I + L + + Y T+ RF L T Q +++ EYE
Sbjct: 459 NRVFGYYIEVTKANLRHLPEGMYERKQTLTNAERFITPELKEKETMILEAQEKSVDLEYE 518
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFS-IASTCAPKPYVRPCMKPMGTG 520
+ EV Y Q L +L++ +++ DVL F+ IA T YVRP G
Sbjct: 519 -----LFLEVREKVKTYVQELQRLAEQISRIDVLQGFAQIAETNG---YVRPLY---GQA 567
Query: 521 SLV-LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
LV + Q RHP+VE + +++PND+Y E L+TGPNM GKSTY+R + + L
Sbjct: 568 RLVDIKQGRHPVVENVLKDETFVPNDIYMNE-ETDVLLITGPNMSGKSTYMRQLALIAIL 626
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
Q+G F+PC+SAT+ + DQIFTR+GAAD G STFM+EM E + TE+S++++D
Sbjct: 627 GQMGSFIPCESATLPIFDQIFTRIGAADDLVSGQSTFMVEMLEANHALSNATEHSMILLD 686
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
E+GRGTST+DG +A SI + H + TLF+TH+HE+ L + +NV V A E E
Sbjct: 687 EIGRGTSTYDGMALAQSIVEHIHEHIRAKTLFSTHYHELTSLEDQLERLKNVHVRAEEYE 746
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY 741
N+V L+Q+K G +SYG+H AK+A P ++ +A L+ ++
Sbjct: 747 GNVVFLHQIKDGPADESYGIHVAKLADLPSSLINRATALLTQF 789
>gi|156039323|ref|XP_001586769.1| hypothetical protein SS1G_11798 [Sclerotinia sclerotiorum 1980]
gi|154697535|gb|EDN97273.1| hypothetical protein SS1G_11798 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 402
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 215/400 (53%), Gaps = 45/400 (11%)
Query: 385 MKEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSIDDR--YTILDTVRGGVRF 441
M + A+ L +K I LEN+ G+ R+T + I ++ Y T++ GV F
Sbjct: 1 MDQEFRVVAKDLGQEIEKKIFLENNKIHGWCMRLTRTEASCIRNKSKYQECQTLKSGVFF 60
Query: 442 QDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIA 501
+L + ++ + Y Q S+V EV+ ++A Y + L+ +LA DV+VS +
Sbjct: 61 TTSKLLSLRREFDQLSENYNRTQTSLVHEVVAVAASYCPVIETLASILAHLDVIVSLAHT 120
Query: 502 STCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
S AP YVRP M P GTGS +L + RHP +E+Q V +I NDV E SF ++TGPN
Sbjct: 121 SAHAPTSYVRPKMHPRGTGSTILKEARHPCMEMQDDVQFITNDVSLVRDESSFLIITGPN 180
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR IGV +AQIGCFVPC A +++ D I RVGA+DSQ +G+STFM EM E
Sbjct: 181 MGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLE 240
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA ++K T SL+IIDELGRGTST+DGFG+A +I+ + F
Sbjct: 241 TANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAF-------------- 286
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY 741
++ G C +S+G+H A++ +P+ ++ AR +E
Sbjct: 287 -------------------------IEEGICDQSFGIHVAELVKFPKKVINMARRKAEEL 321
Query: 742 E-YSLDTKTPSGDETNNREEEYFKT-VQEGEYQMFDFLQQ 779
E + TK D + +E+ K V+EG + + L++
Sbjct: 322 EDFGTSTKVDV-DYGDPSSQEFAKEDVEEGSRLLKEVLKK 360
>gi|307262087|ref|ZP_07543741.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306868266|gb|EFN00089.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 864
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 205/697 (29%), Positives = 343/697 (49%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+ SN EA+ + + LLPAE L IL+ K
Sbjct: 142 AIATLDMTSGRFLITEL------SNKEALAAEL---QRLLPAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S V + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTVLLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QKEQRIEPLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D R+ ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTRLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLERAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 MQLAAMALSELDVLTN--LAERAESLNYVRPTFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TENSLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KKTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
>gi|379728095|ref|YP_005320280.1| DNA mismatch repair protein MutS [Melissococcus plutonius DAT561]
gi|376318998|dbj|BAL62785.1| DNA mismatch repair protein MutS [Melissococcus plutonius DAT561]
Length = 862
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 280/554 (50%), Gaps = 64/554 (11%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
Q + Q +LL +LD +T G RLL QW+ +PL + I +R V L++ RM
Sbjct: 269 QSIRTGQKKGTLLWLLDETKTAMGGRLLKQWLDRPLIQEEQIKKRQEMVQSLLDAYFERM 328
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+L + AL + D++ L R+ +D ++ + Q+P + + L+ ++
Sbjct: 329 DL-QTALTSVYDLERLVGRVAFGNVNGRDLIQLKTSLEQVPAI----QQLIIGIDHGEWK 383
Query: 364 TIL--------------------SSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKT 403
+L S LQ + KD +++ EY ++ +A+
Sbjct: 384 DLLVDLTPMDELVELICMAINEESPLQITEGNVIKDGYDEQLDEYRDAMRHGKQWLAELE 443
Query: 404 IK------LENSPQGF----AYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLA--- 447
K ++N GF Y I + L N DRY T+ RF +L
Sbjct: 444 AKERMETGIKNLKVGFNRVFGYYIEITKANLGNLNIDRYERKQTLANAERFVTPQLKQIE 503
Query: 448 --TANTQYQAIQREYETH---QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+ +++ EY+ ++ I E + + L L+ ++ DVL +F A+
Sbjct: 504 HLILEAEEKSVDLEYQLFLKVREQIKENI--------EHLQYLAKTISNLDVLQAF--AT 553
Query: 503 TCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
YV P +K G SL + + RHP+VE + G YIPN++ S + L+TGPN
Sbjct: 554 VSEKYHYVCPELKNYGK-SLSIVEGRHPVVEKVLGYQEYIPNNIEMDSATTTL-LITGPN 611
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
M GKSTY+R + ++V +AQIGCFVP +SA + + DQIFTR+GA+D G STFM+EM E
Sbjct: 612 MSGKSTYMRQLALTVIMAQIGCFVPAESAILPIFDQIFTRIGASDDLIAGQSTFMVEMME 671
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
++ T NSL++ DELGRGT+T+DG +A +I + + + TLF+TH+HE+ +L
Sbjct: 672 ANQALRHATPNSLILFDELGRGTATYDGMALAQAIIEYIHQNVRAKTLFSTHYHELTILD 731
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEY 741
+ +P +NV V A+E+ + ++ L+++ G KSYG+H AK+AG P +LE+A ++
Sbjct: 732 QSLPDLKNVHVGAIEKNNEVIFLHKIMEGPADKSYGIHVAKIAGLPNGLLERATVILSSL 791
Query: 742 E-----YSLDTKTP 750
E LDT P
Sbjct: 792 ESENNLTKLDTSIP 805
>gi|339634969|ref|YP_004726610.1| DNA mismatch repair protein MutS [Weissella koreensis KACC 15510]
gi|338854765|gb|AEJ23931.1| DNA mismatch repair protein MutS [Weissella koreensis KACC 15510]
Length = 857
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 273/539 (50%), Gaps = 48/539 (8%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ Q +LL +LD +T G RLL QW++QPL D ++ R+ + + N +L +
Sbjct: 271 TQQRSGTLLWLLDETKTAMGGRLLKQWIEQPLIDQQNLMSRYDKIEQFMQNFLIENDL-Q 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-------------- 353
AL+ + D++ L R+ A +D ++ + Q+P ++ +LE L
Sbjct: 330 SALKSVYDLERLVGRVAYGSANGRDLLQIRNSLRQIPTILELLEDLDPAVFGGLISQIDP 389
Query: 354 ---------VQNVEASNLNTILSSLQSLKMMDRKDAVMDKM---KEYL---ESTARRLNL 398
+EA L+ L D+ DA D M K++L E+T R
Sbjct: 390 VTDLEALISTAIIEAPPLSVTDGGLIKAGYNDQLDAYQDVMHNGKQWLAELEATEREATG 449
Query: 399 VADKTIKLENSPQGFAYRITMKLNNSIDD-RYTILDTVRGGVRF-----QDDRLATANTQ 452
+ I N G+ +T + +DD RYT T+ RF ++ +
Sbjct: 450 INSLKIGF-NKVFGYYIEVTRANIDKLDDNRYTRKQTLVNAERFITPELKEHEQKILEAE 508
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
++ Q EY+ Q V E I ++ + L +L+ +A DVL S +A + RP
Sbjct: 509 EKSSQLEYQLFTQ--VREQIKLN---IKRLQRLAKQIATLDVLTS--LADVAQKNQFTRP 561
Query: 513 CMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
+ +V RHP+VE + G SY+ ND+ + L+TGPNM GKSTY+R
Sbjct: 562 RLNQKQHLEIV--GGRHPVVEKVLGHQSYVANDIMMDQNQ-EIMLITGPNMSGKSTYMRQ 618
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
+ ++V +AQIG FVP SA + + DQIFTR+GAAD G STFM+EM E T ++ T+
Sbjct: 619 LALTVIMAQIGSFVPAQSADLPIFDQIFTRIGAADDLISGNSTFMVEMSEANTALQNATK 678
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
NSL++ DELGRGT+TFDG +A +I + + TLF+TH+HE+ L + +P NV
Sbjct: 679 NSLILFDELGRGTATFDGMALAQAIIEHIHQNVHAKTLFSTHYHELTSLDQELPQLFNVH 738
Query: 692 VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
V A E+ L+ ++V G +SYG++ AK+AG P+ ++E+A ++ + E TK P
Sbjct: 739 VGAHEENGELIFSHKVLAGPADQSYGINVAKLAGLPQTLIERATVILNQLETPEQTKIP 797
>gi|312130476|ref|YP_003997816.1| DNA mismatch repair protein muts [Leadbetterella byssophila DSM
17132]
gi|311907022|gb|ADQ17463.1| DNA mismatch repair protein MutS [Leadbetterella byssophila DSM
17132]
Length = 864
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 170/565 (30%), Positives = 288/565 (50%), Gaps = 45/565 (7%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVL--PQQGSTSAQTYDSLLGILDRCRTPQGHR 269
D++N+ + +D +YV + + +L +L P +G L+ ILD+ TP G R
Sbjct: 250 DHINRLT--RLDQEQYVWLDRFTIRNLELLFSPHEGGVP------LIDILDQTVTPMGAR 301
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL +W+ PLK+ I ER V + + NL + L+ + D++ L ++ ++
Sbjct: 302 LLRKWLVLPLKNKAQIEERLNTVQYFAGDDQVLQNLIQ-VLKPIGDLERLVSKVAVRRIN 360
Query: 330 LKDCYRVYEGVSQLPKLISIL----------------ESLVQNVEASNLNTILSSLQSLK 373
++ ++ + ++Q+ L +L + LV+ +E + + +
Sbjct: 361 PREMVQLKKALAQIEPLKELLVGHPSMEKLTGQLNDCKFLVEKIERELRDDAPTQMNQGG 420
Query: 374 MMDRK-DAVMDKM-------KEYL-ESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNN 423
M+ DA +D++ K+YL + R ++K+ N G+ ++ +
Sbjct: 421 MIKTGVDAPLDELHKIAFSGKDYLVDIQNRESERTGIPSLKIAYNKVFGYYLEVSNAHKD 480
Query: 424 SIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLN 483
+ + T+ R+ + L Q + + + I E++ +A Y +
Sbjct: 481 KVPQEWIRKQTLVNAERYITEELKVYEEQILTAESKINEIEFRIFNELVLTAAEYVNVIQ 540
Query: 484 QLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE--LQGGVSYI 541
+ + V++ D L+SF A Y RP + L + RHP++E L G SY+
Sbjct: 541 ENARVISNLDALLSF--ARVALKNGYARPVITE--EKRLDIKGGRHPVIEQQLPTGESYV 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PND+Y E ++TGPNM GKS +R + V +AQIG FVP SA + +VD+IFTR
Sbjct: 597 PNDLYLDDEEQQIIIITGPNMAGKSALLRQTALIVLMAQIGSFVPAASAEVGIVDKIFTR 656
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
VGA D+ RG STFM+EM ETA+++ + SLVI+DE+GRGTST+DG +A SIA L
Sbjct: 657 VGANDNLSRGESTFMVEMTETASILNNLGDRSLVIMDEIGRGTSTYDGVSIAWSIAEYLH 716
Query: 662 SHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVH 719
+H++ P TLFATH+HE+ LS P +N V+ E +V L ++K G S+G+H
Sbjct: 717 NHKKQRPRTLFATHYHELNNLSNDFPRIKNFNVAVKEMNGKVVFLRKLKEGGSEHSFGIH 776
Query: 720 CAKMAGYPEDMLEQARDLMKEYEYS 744
A++AG P+ ++ +A ++++E E S
Sbjct: 777 VAQLAGMPQSVVLRANEILQELEKS 801
>gi|312793677|ref|YP_004026600.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180817|gb|ADQ40987.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 863
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 172/528 (32%), Positives = 264/528 (50%), Gaps = 50/528 (9%)
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
+SLLGILD+ +T G RLL +W+++PL D+ I R +V L +N + + E R
Sbjct: 277 NSLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKSNYSILVQIEELLSR- 335
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL 372
+ D++ L+ + K KD + + LP L +L S A L I L +L
Sbjct: 336 MYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSF----SAQLLKEIYEGLDTL 391
Query: 373 K------------------------------MMDRKDAVMDKMKEYL-ESTARRLNLVAD 401
+ +DR + KE L + + NL
Sbjct: 392 EDIYALIDSSINEDAPVTLKEGGIIKDGFNEEVDRLRNISKNSKELLVQYEEKERNLTGI 451
Query: 402 KTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQ-YQAIQRE 459
K +++ N G+ +T + + DRY T+ R+ + L + A Q+
Sbjct: 452 KNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLANAERYITEELKKLEDEILGADQKL 511
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP--CMKPM 517
E Q E I A + + + + +A DVL SF A YVRP C+
Sbjct: 512 IELEYQLFCEIRDRIEAQ-IERIQKTASYIAILDVLCSF--ARIAIDNEYVRPNVCL--- 565
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
+ RHP+VE + G ++IPND E ++TGPNM GKSTY+R + + V
Sbjct: 566 -GDRIYFKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGPNMAGKSTYMRQVALIV 624
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+GCFVP D A I +VD+IF+R+GA+D G STFM+EM E A ++K T SL+I
Sbjct: 625 IMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMSEVANILKNATPKSLII 684
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSA 694
DE+GRGTST+DG +A ++ +A + TLFATH+HE+ L IP +N +V
Sbjct: 685 FDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVKNYRVDV 744
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
E+ N++ L ++ G C SYG+H A++AG PE++L++A +++K+ E
Sbjct: 745 KEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLE 792
>gi|300362260|ref|ZP_07058436.1| DNA mismatch repair protein MutS [Lactobacillus gasseri JV-V03]
gi|300353251|gb|EFJ69123.1| DNA mismatch repair protein MutS [Lactobacillus gasseri JV-V03]
Length = 857
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 300/613 (48%), Gaps = 84/613 (13%)
Query: 176 DDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVM 235
DD+E+K + L L+T L L Q + S + ++Y+ MS V
Sbjct: 217 DDAEIKATKQLVAYLLSTQKRSLAHL--------------QVA-QSYEPTQYLQMSHTVQ 261
Query: 236 SSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNIL 295
++L ++ + + +++ SL +LD+ T G RLL W+++PL + I R V L
Sbjct: 262 TNLELI--KSAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLSVTEINRRQEMVQAL 319
Query: 296 VNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI-SILES-- 352
+++ R + + +L+G+ D++ L RI ++ ++ + +P ++ S+LE+
Sbjct: 320 LDDYFTREKVID-SLKGVYDLERLTGRIAFGSVNAREMLQLAHSLGAIPDILNSLLETNN 378
Query: 353 -----------LVQNVEASNLNTILSSLQSL------------KMMDRKDAVMDKMKEYL 389
++ + +NTI+ + L +DR M+ K++L
Sbjct: 379 PHLQNFAKQIDPLKGIHDLIVNTIVDNPPLLTTEGGLIREGVSDQLDRYRDAMNNGKKWL 438
Query: 390 ---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID-DRYTILDTVRGGVRFQDDR 445
ES R + + + + N G+ +T + + DRYT T+ R+
Sbjct: 439 SEMESHEREVTGINNLKVGY-NKVFGYYIEVTNSNKDKVPTDRYTRKQTLTNAERY---- 493
Query: 446 LATANTQYQAIQREYETHQQSIVEEVIGISAG---------------YTQTLNQLSDVLA 490
I E + H+ S++ E S G Y L +L+ +A
Sbjct: 494 ----------ITPELKEHE-SLILEAEAKSTGLEYDLFVKLRENVKKYIPALQKLAKQVA 542
Query: 491 QFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKS 549
DVL+ F A+ YVRP V+N RHP+VE + SYIPNDV
Sbjct: 543 SLDVLIDF--ATVSEQNNYVRPDFTVDKQEINVVN-GRHPVVEQVMTAGSYIPNDVKMDQ 599
Query: 550 GEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQY 609
F L+TGPNM GKSTY+R + + +AQIGCFVP DSAT+ + DQIFTR+GAAD
Sbjct: 600 DTDIF-LITGPNMSGKSTYMRQMALIAIMAQIGCFVPADSATLPIFDQIFTRIGAADDLI 658
Query: 610 RGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTL 669
G STFM+EM E ++ T+ SL++ DE+GRGT+T+DG +A +I + L TL
Sbjct: 659 SGQSTFMVEMSEANDALQHATKRSLILFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTL 718
Query: 670 FATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
FATH+HE+ L + + +N+ V A E+ L+ L+++ PG +SYG+H A++AG P
Sbjct: 719 FATHYHELTDLDQTLKHLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPRK 778
Query: 730 MLEQARDLMKEYE 742
+L +A ++K E
Sbjct: 779 VLREATTMLKRLE 791
>gi|217077343|ref|YP_002335061.1| DNA mismatch repair protein MutS [Thermosipho africanus TCF52B]
gi|217037198|gb|ACJ75720.1| DNA mismatch repair protein MutS [Thermosipho africanus TCF52B]
Length = 817
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 186/646 (28%), Positives = 328/646 (50%), Gaps = 63/646 (9%)
Query: 163 EDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE--LMNNEDNMNQFSIH 220
ED +++ ++V D EL N +L L +L+ YLE LM+N +
Sbjct: 196 EDKVKETFKIVSIDHFELSNGQL----------RVLGALLKYLEYTLMSN---LALEEPK 242
Query: 221 SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLK 280
++ SK++ + S + +L ++P G YD IL++ +T G RLL +W+ QPLK
Sbjct: 243 KLEESKWMILDSKTVDNLSLIP--GEKGKNLYD----ILNKTKTAMGSRLLKKWILQPLK 296
Query: 281 DLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGV 340
I+ER V+ N+ + EY L G+ D++ + R+ K KD + +
Sbjct: 297 VKKDIIERQEIVDAFFNDRLLLNEIREY-LNGIFDVERILTRLQYGKVSPKDLISLKNTL 355
Query: 341 SQLPKLISILESLVQNVEASN-LNTILSSLQSLKMMDR----------------KDAV-- 381
+P +ILE+L N + S + I + +++++R KD
Sbjct: 356 YIIP---NILEALKTNEKFSKYVQEIEEFPEVVELLERALYEDPSSTVGDGNVIKDGYSP 412
Query: 382 -MDKMKEYLESTARRLNLVADKTIKLENSP-------QGFAYRITMKLN--NSIDDRYTI 431
+D + +L + +L + + N Q F Y I + ++ D Y
Sbjct: 413 ELDDYRNFLFHSEDKLKEFEREERERTNIQKLKVGFNQVFGYYIEVPKGQVKNVPDYYIR 472
Query: 432 LDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQ 491
T+ R+ +L + + + + E ++++ +E+ + Y + + ++ +A+
Sbjct: 473 KQTLVNSERYITQKLKEFEEKIMSAREKVEILEKALFDELTKMILKYVNDIKKTAEKIAE 532
Query: 492 FDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGE 551
DVL +F+ S YV+P ++ + RH +VE + +++PND+Y S
Sbjct: 533 LDVLSTFAYVSQLYG--YVKP---EFDDEKFIVKEARHAVVE-RYVSNFVPNDIYMDSLR 586
Query: 552 VSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRG 611
+ ++TGPNM GKSTYIR +G+ +AQIGCFVP +A + + D+IFTR+GA D G
Sbjct: 587 RMY-IITGPNMSGKSTYIRQVGLIAVMAQIGCFVPAKNAKLPIFDRIFTRMGARDDISTG 645
Query: 612 ISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFA 671
STF++EM E A ++ K T++SLV++DE+GRGTSTFDG +A +++ + + + T+FA
Sbjct: 646 KSTFLVEMSEVALILSKATKDSLVLLDEVGRGTSTFDGISIAWAMSEYIYNEIKCKTIFA 705
Query: 672 THFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDML 731
THF E+ LS V +N+ + E D +V L++V G +SYG+ AK+AG P+ ++
Sbjct: 706 THFTELTELSDVYNGIKNLTIEVEETNDGIVFLHKVVDGVADRSYGIEVAKIAGVPDGVV 765
Query: 732 EQARDLMK--EYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFD 775
E+A+++++ + L+ K E R+ + K V EG+ +F+
Sbjct: 766 ERAKEILEVITKKSELEKKVRVLKEGQLRQIKSRKKVAEGQLTIFE 811
>gi|257876210|ref|ZP_05655863.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC20]
gi|257810376|gb|EEV39196.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC20]
Length = 853
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 213/750 (28%), Positives = 338/750 (45%), Gaps = 84/750 (11%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G A VDL T + ++ D++ N A + K C E L + ++ +
Sbjct: 144 GFAYVDLSTGELKAAQLEDEEAVVNEAAALQTKEVVLCSEIPESLQTTLTNRLNVVFSKQ 203
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ + +F E L Q++ ++V +LL + +T RSL + + +
Sbjct: 204 ETLEENAEFQFLTEPLSQELEKVV--------TGKLLSYLAITQK----RSLAHIQQAVE 251
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + H++ Y + + S+ +QG+ LL +LD +T G R
Sbjct: 252 YQPD------HALKMDHYSKFNLELTQSIRTGKKQGT--------LLWLLDETKTAMGGR 297
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL QW+ +PL I R V L+++ R +L E AL + DM+ L R+
Sbjct: 298 LLKQWLDRPLIQPKKITARQEMVQSLLDSFFERADLQE-ALTKVYDMERLVGRVAFGNVN 356
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL--------KMMDR---- 377
+D ++ + Q+P ++ L+Q + N +L L L +D
Sbjct: 357 GRDLLQLKSSLEQVP----LIAQLLQGINRGEWNDLLLELTPLDDLVALIEAAIDEDAPL 412
Query: 378 --------KDAVMDKMKEY-------------LESTARRLNLVADKTIKLENSPQGFAYR 416
KD ++ EY LE+ R+ V + + N G+
Sbjct: 413 QITEGNIIKDGFHQQLDEYRTAMRNGKQWLAELEANERQATGVKNLKVGF-NRVFGYYIE 471
Query: 417 IT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQREYETHQQSIVEE 470
IT L N RY T+ RF L T + +++ EY + EE
Sbjct: 472 ITKANLVNLDTSRYERKQTLANAERFISPELKKLETLILEAEEKSVDLEYRLFL-DVREE 530
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
V L +L+ ++ DVL SF A+ YVRP + S++ RHP
Sbjct: 531 V----KKSITRLQKLAKAVSAVDVLQSF--ATVSERYQYVRPTVAKKRAVSII--DGRHP 582
Query: 531 IVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
+VE + G YIPN + E L+TGPNM GKSTY+R + V +AQIGCFVP S
Sbjct: 583 VVEKVLGHQEYIPNSIVMDE-ETEILLITGPNMSGKSTYMRQFALLVIMAQIGCFVPAQS 641
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DELGRGT+T+DG
Sbjct: 642 AEMPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRHATPNSLILFDELGRGTATYDG 701
Query: 650 FGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
+A +I + TLF+TH+HE+ +L + RNV V A+E+E +V L+++
Sbjct: 702 MALAQAIIEYIHKEVHAKTLFSTHYHELTVLDEELAHLRNVHVGAVEKEGEVVFLHKMME 761
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEG 769
G KSYG+H AK+AG P +L++A ++K E T P +++ F V
Sbjct: 762 GPADKSYGIHVAKIAGLPSALLQRAATILKALEEHEPTVQPKPVVEESQQLSLFSEVSTE 821
Query: 770 EYQMFDFLQQ--CLSLSKQKDTNRILHLQE 797
E + D L++ L ++ N + LQ+
Sbjct: 822 EIGVIDQLKKLNLLEMTPMDALNTLYELQK 851
>gi|312622277|ref|YP_004023890.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202744|gb|ADQ46071.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kronotskyensis 2002]
Length = 863
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 265/526 (50%), Gaps = 46/526 (8%)
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
+SLLGILD+ +T G RLL +W+++PL D+ I R +V L +N + + E R
Sbjct: 277 NSLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKSNYSILVQIEELLSR- 335
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL 372
+ D++ L+ + K KD + + LP L +L S A L I L +L
Sbjct: 336 MYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSF----SAQLLKEIYEGLDTL 391
Query: 373 K------------------------------MMDRKDAVMDKMKEYL-ESTARRLNLVAD 401
+ +DR + KE L + + NL
Sbjct: 392 EDIYALIDSSINEDAPVTLKEGGIIKDGFNEEVDRLRNISKNSKELLVQYEEKERNLTGI 451
Query: 402 KTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQ-YQAIQRE 459
K +++ N G+ +T + + DRY T+ R+ + L + A Q+
Sbjct: 452 KNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLANAERYITEELKKLEDEILGADQKL 511
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
E Q E I A + S++ A DVL SF A YVRP + +G
Sbjct: 512 IELEYQLFCEIRDRIEAQIERIQKTASNI-AILDVLCSF--ARIAIDNEYVRPNVY-LG- 566
Query: 520 GSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+ + RHP+VE + G ++IPND E ++TGPNM GKSTY+R + + V +
Sbjct: 567 DRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGPNMAGKSTYMRQVALIVIM 626
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQ+GCFVP D A I VVD+IF+R+GA+D G STFM+EM E A ++K T SL+I D
Sbjct: 627 AQMGCFVPADEAYIGVVDKIFSRIGASDDISSGQSTFMVEMSEVANILKNATPKSLIIFD 686
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
E+GRGTST+DG +A ++ +A + TLFATH+HE+ L IP +N +V E
Sbjct: 687 EVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVKNYRVDVKE 746
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ N++ L ++ G C SYG+H A++AG PE++L++A +++K+ E
Sbjct: 747 EGKNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLE 792
>gi|82793333|ref|XP_727998.1| DNA mismatch repair protein Msh2 [Plasmodium yoelii yoelii 17XNL]
gi|23484124|gb|EAA19563.1| DNA mismatch repair protein msh2 [Plasmodium yoelii yoelii]
Length = 593
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 237/428 (55%), Gaps = 32/428 (7%)
Query: 373 KMMDRKDAVMDKMKEYLESTARRLNLVADK-----------TIKL-ENSPQGFAYRITMK 420
++ + K A+M K+K + E + +L +DK I+L E + GF +R+ K
Sbjct: 143 QIYNEKSALMKKIKNHKEDVEK--DLFSDKHDRRNKKAMREDIRLIECNTNGFLFRVCKK 200
Query: 421 ---LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
L +Y + + F + L +Y+ Y T Q IV++ I +
Sbjct: 201 DCPLVQQQKKKYLPIRMNKNEFLFTTNTLKNLCREYEHCLSIYNTLQSEIVKKTICAVST 260
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGG 537
YT + + DV++ DVLVSFS+ +P YVRP + G ++++ + RHP++ELQ
Sbjct: 261 YTPVIEKFIDVVSTLDVLVSFSVVCYNSPFTYVRPALVKNGE-NVIMKKSRHPLLELQHN 319
Query: 538 VS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
+S +IPND++ + +VTGPNMGGKSTYIR I + LAQIG FVPCD I +
Sbjct: 320 ISNFIPNDIHMNKNKSRLIIVTGPNMGGKSTYIRQIAIICILAQIGMFVPCDFCEIPIFT 379
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
QI RVGA+D Q +GISTF+ EM E + +IK NSL+I+DELGRGTST++G G++ SI
Sbjct: 380 QIMCRVGASDFQLKGISTFLSEMIEASAIIKNADNNSLIIVDELGRGTSTYEGLGISWSI 439
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN--LVLLYQVKPGSCVK 714
+ + + + F LFATHFHE++ ++ N + + + N + LY++K G+ K
Sbjct: 440 GKYILDNIKCFCLFATHFHEMSNIAYQCEGVINRHIETIIDQKNKKICFLYEIKDGASNK 499
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE-----------YSLDTKTPSGDETNNREEEYF 763
SYGV+ A++A P+D++++A + ++E E ++DT + + ++ N Y
Sbjct: 500 SYGVNVAEIAKLPKDVIQKAYEKVEELESAENKYYLKEKLNIDTSSSTNEKYKNNISNYV 559
Query: 764 KTVQEGEY 771
K E Y
Sbjct: 560 KIKDEINY 567
>gi|229092807|ref|ZP_04223945.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-42]
gi|228690605|gb|EEL44386.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-42]
Length = 882
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|283770359|ref|ZP_06343251.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus H19]
gi|283460506|gb|EFC07596.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus H19]
Length = 872
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 287/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S LVQ + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMTEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S D K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASADKKS 792
>gi|104774422|ref|YP_619402.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|122983907|sp|Q1G938.1|MUTS_LACDA RecName: Full=DNA mismatch repair protein MutS
gi|103423503|emb|CAI98405.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 856
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 287/583 (49%), Gaps = 52/583 (8%)
Query: 197 CLRSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
+R L+ YL L + ++ + S + +Y+ M++ V +L + Q +T+ + SL
Sbjct: 223 AVRQLVVYL-LATQKRSLAHLQVAESFEIGQYLQMANTVQRNLEL--TQSATTGRKQGSL 279
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+LD+ T G RLL QW+ +PL LD I +R V L+++ R N+ + +L+G+ D
Sbjct: 280 FWVLDKTTTAMGGRLLKQWLSRPLLSLDRIKQRQQMVQALLDDYFTRENIVD-SLKGVYD 338
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL--------ESLVQNVEASN--LNTI 365
++ L+ R+ ++ ++ + + +I L E Q ++ + +I
Sbjct: 339 LERLSGRVAFGNVNPRELLQLAKSLEATKLIIQTLVESGNPDLEKYGQGIDPQSELAESI 398
Query: 366 LSSLQSLKMMDRKDAV---------MDKMKEYLESTARRL---NLVADKTIKLENSPQG- 412
+ L + KD +DK +E + + L + + ++N G
Sbjct: 399 TNCLVDQPPISAKDGGIIRAGVSEDLDKYREAMNGGKKWLAQMEMEERQRTGIDNLKIGY 458
Query: 413 ---FAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLAT-ANTQYQAIQR----EYE 461
F Y I + N DRYT T+ R+ L N +A R EYE
Sbjct: 459 NRVFGYFIQVSKGNVAKVPQDRYTRKQTLTNADRYITPELKEHENLILEAESRSTDLEYE 518
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGS 521
Q + E + + L +L LA DV V+F A K Y RP
Sbjct: 519 LFSQ--LREAV---KAHIPDLQELGRQLAALDVFVAF--AQDAEEKNYCRPSFS--SKNE 569
Query: 522 LVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
+ + RHP+V L G SYIPND+ + S L+TGPNM GKSTY+R + + +A
Sbjct: 570 IAVKNGRHPVVGAVLPAG-SYIPNDLVMDE-DTSIYLITGPNMSGKSTYMRQLALIAIMA 627
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
QIG FVP DSA + V DQ+FTR+GAAD Y G STFM+EM E ++ + SLV+ DE
Sbjct: 628 QIGSFVPADSAKLPVFDQVFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDE 687
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+T+DG +A +I + L TLFATH+HE+ L + +N+ V A E+
Sbjct: 688 IGRGTATYDGMALAGAIIKYLHDKVGAKTLFATHYHELTELDETLLHLKNIHVGATEENG 747
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L+++ PG +SYG+H AK+AG P +L +A ++K E
Sbjct: 748 KLIFLHKILPGPADQSYGIHVAKLAGLPRVVLREASSMLKRLE 790
>gi|47568274|ref|ZP_00238977.1| DNA mismatch repair protein MutS [Bacillus cereus G9241]
gi|47555102|gb|EAL13450.1| DNA mismatch repair protein MutS [Bacillus cereus G9241]
Length = 892
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKA 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|229157348|ref|ZP_04285426.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 4342]
gi|228626075|gb|EEK82824.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 4342]
Length = 886
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|229197880|ref|ZP_04324596.1| DNA mismatch repair protein mutS [Bacillus cereus m1293]
gi|228585598|gb|EEK43700.1| DNA mismatch repair protein mutS [Bacillus cereus m1293]
Length = 886
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|400602832|gb|EJP70430.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 1206
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 199/703 (28%), Positives = 333/703 (47%), Gaps = 61/703 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A VD T F++ + DD + E I Q P+E LL +L+ N+I+
Sbjct: 468 GIAFVDTATGHFFLTDFIDDVDLTKFETFIAQIGPREMLLEKSHLSTKANRILKNNTSPT 527
Query: 150 VCMTGRKKN-EFSEEDLMQDVNRLVRFDDSELKNARLLPEMC--------LTTATHCLRS 200
T K + EF + D + + +E + PE + +A L
Sbjct: 528 TIWTYLKPDVEFWDADTCRRELNAANYFSTEKGSEGSWPEALEKEKDNDRVMSAVGALIW 587
Query: 201 LINYLELMNNEDNMNQFSIHS-IDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
+ +L+L + + FS+++ I + + + + +L + S + + +L +L
Sbjct: 588 YLRFLKLERPLLSQSNFSLYNPIQKNGTLILDGQTLINLEIF--SNSVNGGSEGTLFQLL 645
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
++C TP G RL QW+ PL+++D I ER AV++L + R ++ +PD++ L
Sbjct: 646 NKCITPFGKRLFRQWVAHPLQNIDRINERLDAVDMLNKDPSVREQFSSQLVK-MPDLERL 704
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASN--LNTILSSLQSLK---- 373
RI +D RV EG Q I +LV + SN L+ ++S++ L+
Sbjct: 705 ISRIHACSCKPEDFVRVLEGFEQ----IEYTMTLVSAFKGSNGLLDRLISAMPDLEEPLA 760
Query: 374 ----MMDRKDAVMDKM-------KEYLESTARRLN--------LVADKTIKLENSPQGFA 414
DR A DK+ +E +++ R+ L+ADK ++L+ F
Sbjct: 761 YWRNAFDRPKAKQDKILIPERGIEEDFDASLERIETIKSQLQELLADKKVELKCKSLKFT 820
Query: 415 ------YRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
Y+I + + + + + R+ L + +Q ETH Q +V
Sbjct: 821 DVGKEIYQIEAPKATKVPSSWRQMSSTKDVKRWYFSELTAL---VRELQEAEETHSQ-LV 876
Query: 469 EEVIG-----ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+V Y L+ + V+AQ D LVS + AS C +P RP +
Sbjct: 877 RDVAARFCKKFDVDYELWLSAIQ-VIAQLDCLVSLAKASLCLGEPSCRPQFVDQDRSLVE 935
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
+ RHP + L +IPND+ + + NL+TG N GKST +R ++V +AQIGC
Sbjct: 936 FEELRHPCM-LSTNGDFIPNDIKLGGEQANINLLTGANAAGKSTVLRMSCIAVIMAQIGC 994
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
+VP SA ++ VD+I +R+GA D+ + STF +E+ ET ++ + T SLVI+DELGRG
Sbjct: 995 YVPAISAKLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILSEATPRSLVILDELGRG 1054
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF--RNVQVSALEQEDNL 701
TS++DG +A ++ +A+H FATH+H IA P R +Q+ +QE +
Sbjct: 1055 TSSYDGVAVAQAVLHHVATHIGCVGFFATHYHSIATEFENHPEIRARRMQIHVDDQERRI 1114
Query: 702 VLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
LY+++ G S+G+HCA M G ++E+A KE+E++
Sbjct: 1115 TFLYKLEDGVAEGSFGMHCAAMCGISNSVIERAEVAAKEWEHT 1157
>gi|358067399|ref|ZP_09153878.1| DNA mismatch repair protein MutS [Johnsonella ignava ATCC 51276]
gi|356694315|gb|EHI55977.1| DNA mismatch repair protein MutS [Johnsonella ignava ATCC 51276]
Length = 879
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 194/689 (28%), Positives = 333/689 (48%), Gaps = 51/689 (7%)
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTI 144
L+N G+A VD+ T F+ + D L I + SP E + + + ++ +
Sbjct: 133 LSNHFGIAAVDISTGDFF---VTQADSVHELYDEISRYSPSEVICNHAF-KISTAELDVL 188
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
++ ++ ++E++ ++R E +PE + +A LR Y
Sbjct: 189 KNQYGFGISFLDDQYYNEKECRNIISRQFNISAGERPGFFAMPE-GIISAGAALR----Y 243
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRT 264
L N SI+ +Y+ M + +L + + + Y SLL ++D+ RT
Sbjct: 244 LYETQKSSCPNIQSINYYSCGEYMIMDAGSKRNLELF--ETMREKKKYGSLLWVIDKTRT 301
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG 324
G RLL +++QPL + DAI +RH +V ++ R L EY L + D++ L RI
Sbjct: 302 AMGARLLRSYIEQPLINTDAIEKRHESVAEFLDRYIDRQELGEY-LSSVYDLERLIGRIS 360
Query: 325 RKKAGLKDCYRVYEGVSQLPKLISILES--------------LVQNVEASNLNTILSSLQ 370
AG KD + + LP + +I+ + ++++V N+I
Sbjct: 361 SGLAGTKDMLALAASLKMLPHIKNIINTFSSRLICSLNQDFDVLEDVYELIFNSISEDAP 420
Query: 371 SL------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFA 414
+L +D+ + + K +L E+ R+ + KT+K++ N G+
Sbjct: 421 ALLKEGGIIKSGYSDEIDKLRSAGSEGKNWLAKLETKERKKTGI--KTLKIKYNKVFGYY 478
Query: 415 YRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
+ +T S+ D + T+ R+ LA + + S+ +
Sbjct: 479 FEVTNSYKASVPDYFIRRQTLANAERYTTTELAEIEELILGANGKLIELEYSVFNLIREK 538
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
+A + + +A FDVL+SF A+ YV+P + G + + + RHP+VE
Sbjct: 539 TAAQVARIQASAKTIAAFDVLISF--ANAAYKYNYVKPSINSKGI--ISIKEGRHPVVER 594
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ ++I ND + + + ++TGPNM GKSTY+R + V +AQIG FVP SA I
Sbjct: 595 MIKNEAFIANDTFLDNAKNRMGIITGPNMAGKSTYMRQNALIVLMAQIGAFVPAKSADIC 654
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ D+IFTRVGA+D G STFM+EM E A ++K T+NS +I+DE+GRGTSTFDG +A
Sbjct: 655 ICDRIFTRVGASDDLGSGQSTFMVEMNEVADILKNATKNSFIILDEIGRGTSTFDGLSIA 714
Query: 654 CSIARELASHR--QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGS 711
++ +++ + TLF+TH+HE+ L I N + E DN+ L ++ G
Sbjct: 715 WAVVEHISNTKILGAKTLFSTHYHELTELEGSISGVNNYCILVKESGDNITFLRKIIKGG 774
Query: 712 CVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
KSYG+ AK+AG PE+++++A++L++E
Sbjct: 775 ADKSYGIQVAKLAGIPENVIKRAKELLEE 803
>gi|403069108|ref|ZP_10910440.1| DNA mismatch repair protein MutS [Oceanobacillus sp. Ndiop]
Length = 859
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 281/545 (51%), Gaps = 44/545 (8%)
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
+ SLL +LD+ T G R+L +W+++PL + I ER V+ L + R L E L+
Sbjct: 276 HGSLLWVLDKTATAMGSRMLKKWLERPLLNRKQIEERLQIVDGLYHGFMERDTLRE-ILK 334
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------ESL 353
+ DM+ LA RI +D ++ + + ++P+L + L E L
Sbjct: 335 SVYDMERLAGRIAFGNVNARDLIQLKQSLQKIPELKNTLYQFNLPEINRLADELIMPEHL 394
Query: 354 VQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVAD-----------K 402
VQ ++AS ++ S++ ++ KD ++ Y ++ +A+ K
Sbjct: 395 VQVLDASLVDDPPVSIKEGAII--KDGYNQQLDTYRYASKNGKQWIAELEQKEKKETNIK 452
Query: 403 TIKLE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
++K+ N G+ +T L+ + RY T+ R+ L T + +
Sbjct: 453 SLKIGYNRVFGYYIEVTKANLHLLPEGRYERKQTLTNAERYITPELKEKETLILEAEEKS 512
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ + E+ + L L+D +++ DVL F A+ Y RP G
Sbjct: 513 VDLEYILFLEIREKIKNHIPELQHLADTVSKIDVLQGF--ATVSEANNYKRPRFV---EG 567
Query: 521 SLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
L + RHP++E ++ G S++PNDV E L+TGPNM GKSTY+R + ++V +
Sbjct: 568 KLTIKNGRHPVIEQVMKQG-SFVPNDVSLDE-ETRVLLITGPNMSGKSTYMRQLALTVIM 625
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
QIGCFVPCD A + + DQIFTR+GAAD G STFM+EM E I T+ SL+++D
Sbjct: 626 GQIGCFVPCDEADLIIFDQIFTRIGAADDLVSGQSTFMVEMLEAKHAIANATDQSLILLD 685
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
E+GRGTST+DG +A +I + + TLF+TH+HE+ L + + +NV V A E E
Sbjct: 686 EIGRGTSTYDGMALAQAIVEYIHHNIHAKTLFSTHYHELTALEESLSSLKNVHVRAEEHE 745
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNR 758
N+V L+Q+K G+ +SYG+H AK+A P+ ++E+A ++++ E S D P ++ +
Sbjct: 746 GNVVFLHQIKEGAADQSYGIHVAKLAELPDALIERATAILQQLE-SDDKPAPITEKIESG 804
Query: 759 EEEYF 763
+ +F
Sbjct: 805 QLSFF 809
>gi|205373496|ref|ZP_03226299.1| DNA mismatch repair protein [Bacillus coahuilensis m4-4]
Length = 867
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 294/589 (49%), Gaps = 56/589 (9%)
Query: 194 ATHCLRSLINYLELMNNE--DNMNQFSIHSI-DYSKYVHMSSAVMSSLHVLPQQGSTSAQ 250
A L+NYL + D++ +++ +Y K H S + + +G
Sbjct: 219 AVQTAGRLLNYLSITQKRSLDHLQPVEWYNVMNYLKMDHYSKRNLELTETIRSKGKKG-- 276
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
SLL +LD T G R L QW+ +PL +L I R V +L+ R + E L
Sbjct: 277 ---SLLWLLDETMTAMGGRRLKQWIDRPLINLSDIENRQKVVQLLLERFFEREEIRE-KL 332
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQ 370
+ + D++ LA R+ G +D ++ ++Q+P L IL S+ N+ N +
Sbjct: 333 KEVYDLERLAGRVAFGNVGPRDLVQLKRSLTQIPYLQHILLSIDNNLSHDLANQLDPCED 392
Query: 371 SLKMMDRK----------------DAVMDKMKEYLESTARRLNLVAD-----------KT 403
++D+ D +++ +Y ++ +A+ K+
Sbjct: 393 LTDLLDQSIVEDPPLSLKEGNIICDGYNEELDQYRHASRNGKTWIAELQASERERTGIKS 452
Query: 404 IKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANT-----QYQA 455
+K+ N G+ +T K N + + RY T+ RF L + + ++
Sbjct: 453 LKIGYNRVFGYYIEVT-KANVHLLEEGRYDRKQTLSNAERFITPELKEKESLILEAEEKS 511
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
++ EY Q I E+V + L +L+ ++++ DVL F A+ + YV+P
Sbjct: 512 VELEYRLFQ-LIREQV----KEFIPRLQKLAKLVSEVDVLQGF--ATISEKRQYVKPQFN 564
Query: 516 PMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
LV+ RHP+VE + Y+PN + +GE L+TGPNM GKSTY+R + +
Sbjct: 565 Q--ERHLVIEDGRHPVVEKVMNAQEYVPNSCHM-NGESELLLITGPNMSGKSTYMRQVAL 621
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
+ LAQIGC+VP SA + + DQIFTR+GAAD G STFM+EM E I TENSL
Sbjct: 622 TSILAQIGCYVPATSANLPIFDQIFTRIGAADDLISGQSTFMVEMLEARNAITYATENSL 681
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
++ DE+GRGTST+DG +A +I + + TLF+TH+HE+ +L + +NV VSA
Sbjct: 682 ILFDEIGRGTSTYDGMALAQAIIEYIHENIGCKTLFSTHYHELTVLEEKLSMLQNVHVSA 741
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY 743
+E +V L+++K G KSYG+H A++A PE ++++A++L++ E+
Sbjct: 742 MEHNGKVVFLHKIKEGPADKSYGIHVAELANLPESLIKRAKELLENLEH 790
>gi|196034166|ref|ZP_03101576.1| DNA mismatch repair protein MutS [Bacillus cereus W]
gi|195993240|gb|EDX57198.1| DNA mismatch repair protein MutS [Bacillus cereus W]
Length = 892
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|228916407|ref|ZP_04079974.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228843210|gb|EEM88291.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 886
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|312127451|ref|YP_003992325.1| DNA mismatch repair protein muts [Caldicellulosiruptor
hydrothermalis 108]
gi|311777470|gb|ADQ06956.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
hydrothermalis 108]
Length = 863
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 266/526 (50%), Gaps = 46/526 (8%)
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
+SLLGILD+ +T G RLL +W+++PL D+ I R +V L +N + + E R
Sbjct: 277 NSLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEELKSNYSTLVQVEELLSR- 335
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL 372
+ D++ L+ + K KD + + LP L +L S A L I L +L
Sbjct: 336 MYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSF----SAQLLKEIYEGLDTL 391
Query: 373 K------------------------------MMDRKDAVMDKMKEYL-ESTARRLNLVAD 401
+ +DR + KE L + + NL
Sbjct: 392 EDIYALVDNSINEDAPVTLKEGGIIKDGFNEEVDRLRNISKNSKELLVQYEEKERNLTGI 451
Query: 402 KTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQ-YQAIQRE 459
K +++ N G+ +T + + DRY T+ R+ + L + A Q+
Sbjct: 452 KNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLANAERYITEELKKLEDEILGADQKL 511
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
E Q E I A + + + + +A DVL SF A YVRP + +G
Sbjct: 512 IELEYQLFCEIRDRIEAQ-IERIQKTASYIAILDVLCSF--ARIAIDNEYVRPNVY-LG- 566
Query: 520 GSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+ + RHP+VE + G ++IPND E ++TGPNM GKSTY+R + + V +
Sbjct: 567 DRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGPNMAGKSTYMRQVALIVIM 626
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQ+GCFVP D A I +VD+IF+R+GA+D G STFM+EM E A ++K T SL++ D
Sbjct: 627 AQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMSEVANILKNATPKSLIVFD 686
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
E+GRGTST+DG +A ++ +A + TLFATH+HE+ L IP +N +V E
Sbjct: 687 EVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVKNYRVDVKE 746
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ N++ L ++ G C SYG+H A++AG PE++L++A +++K+ E
Sbjct: 747 EGKNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLE 792
>gi|228935066|ref|ZP_04097896.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824636|gb|EEM70438.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 886
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|423574624|ref|ZP_17550743.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-D12]
gi|401212149|gb|EJR18895.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-D12]
Length = 892
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKA 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|357419712|ref|YP_004932704.1| DNA mismatch repair protein MutS [Thermovirga lienii DSM 17291]
gi|355397178|gb|AER66607.1| DNA mismatch repair protein MutS [Thermovirga lienii DSM 17291]
Length = 862
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 271/533 (50%), Gaps = 42/533 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L +L+RC TP G RLL +W+ PL D + I +RH V L+ N L E L
Sbjct: 282 TLFSVLNRCGTPMGKRLLKEWLLHPLVDHEQIRKRHDGVEKLLQNWTELQRLRE-VLSSC 340
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES---------------LVQNVE 358
D + R+G +D + + + LP ++ ++ L +E
Sbjct: 341 GDAEKALSRLGMGLGAPRDLGVIRDTLGVLPGVMEVVRGAFIDEVLDIPGDPRDLRAKLE 400
Query: 359 ASNLNTILSSLQSLKMMDRK-DAVMDKMKEYLESTARRLNLVAD--------KTIKLE-N 408
++ + + +++ ++ D +D ++ + LN + + K +K+ N
Sbjct: 401 SALCDELPKNIKDGNVIREGFDQELDSLRYLRSHSGEELNAILEREREKTGIKNMKIGFN 460
Query: 409 SPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
G+ I+ + + Y T+ GG RF + L + + + E ++ +
Sbjct: 461 KVFGYYLEISKSYLDKVPQNYIRKQTLVGGERFITEELKELEEKLMTLDIQIEAREKVLY 520
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSI-ASTCAPKPYVRPCMKPMGTGSLV-LNQ 526
E ++ + T+ +SD +A DVL SF++ A C YVRP + G ++ L
Sbjct: 521 ESLVQEVLENSSTIQDISDFIATLDVLCSFAVKARECN---YVRPAIN---DGYVIALRD 574
Query: 527 CRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
RHP+VE L + PNDV S +VTGPNM GKSTY+R + V +AQ G F
Sbjct: 575 ARHPVVEEALGSRAPFTPNDVLLDSYGKRIAIVTGPNMAGKSTYLRMAALLVIMAQAGSF 634
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP A I ++D+IF+R+GA D RG STFM+EM ETA +++ T SLVI+DE+GRGT
Sbjct: 635 VPASKAEIGIIDRIFSRIGAKDELARGKSTFMVEMVETANILRNVTPRSLVILDEIGRGT 694
Query: 645 STFDGFGMACSIARELASHR----QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
ST+DG +A ++ L H+ P LFATH+HE+A L+ +P N+ ++ E E
Sbjct: 695 STYDGISIAWAVLEYL--HKVCDGMPKVLFATHYHELASLADSLPGLFNLSLAVEETEKG 752
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+V LY+++P KSYGV AK+AG PE +++++ +L++ +E + K G+
Sbjct: 753 IVFLYKLEPQPADKSYGVEVAKLAGVPEAVIKRSMELLRRFEEERNFKELGGE 805
>gi|307250881|ref|ZP_07532809.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306857131|gb|EFM89259.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 864
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 203/697 (29%), Positives = 342/697 (49%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+P N EA+ + + LLPAE L IL+ K
Sbjct: 142 AIATLDMTSGRFLITELP------NKEALAAEL---QRLLPAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S + + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTILLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QKEQRIEPLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D R+ ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTRLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLKRAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 MQLAAMALSELDVLTN--LAERAESLNYVRPTFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TE SLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATEKSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KKTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
>gi|114331988|ref|YP_748210.1| DNA mismatch repair protein MutS [Nitrosomonas eutropha C91]
gi|122313305|sp|Q0AEI7.1|MUTS_NITEC RecName: Full=DNA mismatch repair protein MutS
gi|114309002|gb|ABI60245.1| DNA mismatch repair protein MutS [Nitrosomonas eutropha C91]
Length = 880
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 214/747 (28%), Positives = 354/747 (47%), Gaps = 93/747 (12%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
+G+A ++L + E D+ S LE + P E LLP + IL
Sbjct: 147 GVIGLAWLNLAAGDMRVLETSPDNLASELERL----HPSEILLPESL------ALPVIL- 195
Query: 147 RNKVCMTGRKKN-EFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYL 205
N R + +F E MQ + R +F +L NA E L A +L Y+
Sbjct: 196 -NSFTAPKRLPDWQFDYEHAMQQLTR--QFGTRDL-NAFGCEE--LRAAIMAAGALFEYV 249
Query: 206 ELMNN---EDNMNQFSIH--SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
L + +++ Q H ++ + Y+ M +A +L + A T SLL
Sbjct: 250 RLTQHTATDESATQVLGHLQTLRVERPETYLRMDAATRRNLEITLTLRGEEAPTLSSLLD 309
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA-----LRG 312
I C T G RLL W+ PL++ + +R AV+ L+ + YA L+
Sbjct: 310 I---CATSMGSRLLRHWLHHPLRNRITLQQRLDAVSDLIGAKPGIL----YAGIRERLKH 362
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE-----SLVQNVEASNLNTILS 367
+ D++ + RI + A +D + + ++ LP++I ++ ++ + V A +T L+
Sbjct: 363 IADIERITSRIALRTARPRDLSGLRDSLTALPEIIKLITTSTAIAIHRFVPAMEPDTTLT 422
Query: 368 SL--QSLK------------MMDRKDAVMDKMKEY--------LESTARRLNLVADKTIK 405
L +L+ + D DA +D+++ L+ AR T+K
Sbjct: 423 QLLVHALQPVPGAVIREGGVIADGYDAELDELRALQKNCGEFLLQLEARERERTGIPTLK 482
Query: 406 LE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
+E N GF +T I Y T++ R+ L + + + +
Sbjct: 483 VEYNRVHGFYIEVTRIHGEKIPADYRRRQTLKNAERYSIPELQVFENKTLTAREQALAQE 542
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ + E+++ A + L +++ +A+ DVL +F A Y +P +L +
Sbjct: 543 KKLYEQLLEQLADFIIPLQEIARSVAELDVLCAF--AERADLFGYTKPVFT--DDPALDI 598
Query: 525 NQCRHPIVELQGGVSYIPNDVYFKSGEVSFN-----LVTGPNMGGKSTYIRSIGVSVFLA 579
RHP+VE Q YI ND+ G V+ ++TGPNMGGKSTY+R + + LA
Sbjct: 599 EAGRHPVVENQIE-QYIANDIQL--GAVTREGRQMLIITGPNMGGKSTYMRQTALIILLA 655
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
G FVP SA I +DQIFTR+GAAD G STFM+EM E A++++ T SLV++DE
Sbjct: 656 HCGSFVPAGSARIGPIDQIFTRIGAADDLAGGRSTFMVEMTEAASILRNATAQSLVLVDE 715
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGTSTFDG +A +IAR L + Q +TLFATH+ E+ L+ P NV V+A+E +
Sbjct: 716 IGRGTSTFDGLALAFAIARHLLTQNQSYTLFATHYFELTRLAEEFPQAINVHVTAVEHKR 775
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNRE 759
+V L++++ GS +SYG+H A +AG P+ ++ A ++ + E +K+P +
Sbjct: 776 RIVFLHRIEEGSASRSYGLHVAALAGVPDKVIRNAGKILAQLEQEALSKSP--------Q 827
Query: 760 EEYFKTVQE-------GEYQMFDFLQQ 779
+ F+T++E + + D+L+Q
Sbjct: 828 QTLFETIEENAEAAPASAHPVLDYLEQ 854
>gi|332638521|ref|ZP_08417384.1| DNA mismatch repair protein MutS [Weissella cibaria KACC 11862]
Length = 880
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 274/535 (51%), Gaps = 39/535 (7%)
Query: 250 QTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYA 309
Q +LL +LD +T G R L QW++QPL D + I +R+ + L+ + +R L E
Sbjct: 274 QRSGTLLWLLDNTKTAMGGRALKQWLEQPLLDRETIEQRYDKIGELLKDFFSRAALQE-T 332
Query: 310 LRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LS 367
L+ + D++ LA R+ A +D ++ + Q+P ++ L L V L I +S
Sbjct: 333 LKSVYDLERLAGRVAYGTANGRDLLQLRNSLRQVPDIMVTLGDLDPAVFGDLLRRIDPVS 392
Query: 368 SLQSL------------------------KMMDRKDAVMDKMKEYL-ESTARRLNLVADK 402
++ L +D +VM K++L E A+ +
Sbjct: 393 DIEKLISTAIAEEPPISVTDGGVIRAGYNTRLDEYRSVMKNGKQWLAELEAKERSETGIS 452
Query: 403 TIKLE-NSPQGFAYRITMKLNNSID-DRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
++K+ N G+ +T + +D DRYT T+ RF L + +
Sbjct: 453 SLKIGFNKVFGYYIEVTKANIDKLDPDRYTRKQTLVNAERFITPELKDREQMILEAETKS 512
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ + EV + +L+ LA+ DVL S +A+ + RP +
Sbjct: 513 SDLEYQLFTEVREQIKNNITRIQKLAATLAELDVLQS--LATVAEDYKFTRPELT--DKQ 568
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
LV+ RHP+VE + G SY+ NDV+ E + L+TGPNM GKSTY+R + ++V +A
Sbjct: 569 RLVIKDGRHPVVEKVLGHQSYVANDVFMDEDE-TIMLITGPNMSGKSTYMRQLALTVVMA 627
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
QIG +VP A + + DQIFTR+GAAD G STFM+EM E T I+ T+ SL++ DE
Sbjct: 628 QIGSYVPASEAELPIFDQIFTRIGAADDLISGNSTFMVEMSEANTAIQNATKRSLILFDE 687
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
LGRGT+T+DG +A +I + ++ + TLF+TH+HE+ LS +P RNV V A E+
Sbjct: 688 LGRGTATYDGMALAQAIIEHVHNNTKAKTLFSTHYHELTALSDELPNLRNVHVGATEENG 747
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTKTPS 751
LV ++V G +SYG++ AK+AG P+ ++++A D++ E SL+ P+
Sbjct: 748 ELVFSHKVLTGPADQSYGINVAKLAGLPDSLIDRAADILANLEAQDVSLEATAPT 802
>gi|228986913|ref|ZP_04147040.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772862|gb|EEM21301.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 886
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|30263775|ref|NP_846152.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Ames]
gi|47529195|ref|YP_020544.1| DNA mismatch repair protein MutS [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186619|ref|YP_029871.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Sterne]
gi|165872427|ref|ZP_02217062.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0488]
gi|167635842|ref|ZP_02394151.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0442]
gi|167639793|ref|ZP_02398062.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0193]
gi|170687825|ref|ZP_02879039.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0465]
gi|170706805|ref|ZP_02897263.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0389]
gi|177652141|ref|ZP_02934687.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0174]
gi|190568426|ref|ZP_03021333.1| DNA mismatch repair protein MutS [Bacillus anthracis str.
Tsiankovskii-I]
gi|196038192|ref|ZP_03105501.1| DNA mismatch repair protein MutS [Bacillus cereus NVH0597-99]
gi|227813323|ref|YP_002813332.1| DNA mismatch repair protein MutS [Bacillus anthracis str. CDC 684]
gi|229601639|ref|YP_002868011.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0248]
gi|254683522|ref|ZP_05147382.1| DNA mismatch repair protein MutS [Bacillus anthracis str.
CNEVA-9066]
gi|254722043|ref|ZP_05183832.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A1055]
gi|254735809|ref|ZP_05193515.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Western
North America USA6153]
gi|254739665|ref|ZP_05197359.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Kruger B]
gi|254751061|ref|ZP_05203100.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Vollum]
gi|254759379|ref|ZP_05211404.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Australia
94]
gi|421507311|ref|ZP_15954231.1| DNA mismatch repair protein MutS [Bacillus anthracis str. UR-1]
gi|421639524|ref|ZP_16080115.1| DNA mismatch repair protein MutS [Bacillus anthracis str. BF1]
gi|44888189|sp|Q81WR3.1|MUTS_BACAN RecName: Full=DNA mismatch repair protein MutS
gi|254766612|sp|C3P5H5.1|MUTS_BACAA RecName: Full=DNA mismatch repair protein MutS
gi|254766613|sp|C3L822.1|MUTS_BACAC RecName: Full=DNA mismatch repair protein MutS
gi|30258419|gb|AAP27638.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Ames]
gi|47504343|gb|AAT33019.1| DNA mismatch repair protein MutS [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180546|gb|AAT55922.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Sterne]
gi|164711865|gb|EDR17407.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0488]
gi|167512194|gb|EDR87571.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0193]
gi|167528799|gb|EDR91557.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0442]
gi|170128223|gb|EDS97092.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0389]
gi|170668141|gb|EDT18890.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0465]
gi|172082510|gb|EDT67575.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0174]
gi|190560430|gb|EDV14408.1| DNA mismatch repair protein MutS [Bacillus anthracis str.
Tsiankovskii-I]
gi|196030600|gb|EDX69198.1| DNA mismatch repair protein MutS [Bacillus cereus NVH0597-99]
gi|227007689|gb|ACP17432.1| DNA mismatch repair protein MutS [Bacillus anthracis str. CDC 684]
gi|229266047|gb|ACQ47684.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0248]
gi|401822445|gb|EJT21595.1| DNA mismatch repair protein MutS [Bacillus anthracis str. UR-1]
gi|403393189|gb|EJY90434.1| DNA mismatch repair protein MutS [Bacillus anthracis str. BF1]
Length = 892
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TT 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|65321095|ref|ZP_00394054.1| COG0249: Mismatch repair ATPase (MutS family) [Bacillus anthracis
str. A2012]
gi|229186008|ref|ZP_04313178.1| DNA mismatch repair protein mutS [Bacillus cereus BGSC 6E1]
gi|228597427|gb|EEK55077.1| DNA mismatch repair protein mutS [Bacillus cereus BGSC 6E1]
Length = 886
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|409098138|ref|ZP_11218162.1| DNA mismatch repair protein MutS [Pedobacter agri PB92]
Length = 859
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 207/749 (27%), Positives = 357/749 (47%), Gaps = 95/749 (12%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNL------EAIIVQKSPKECLLPAEYLNDNKNKIV 142
+G++ +D+ T +F + + + DY L +I QKS ++ +L ++
Sbjct: 131 IGISFLDISTGEFLIAQ-GNGDYIDKLLQGFKPTEVIFQKSKRQ-----NFLEQFGDRFY 184
Query: 143 TI-LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSL 201
T LD ++++EE L + FD + LK + L + +
Sbjct: 185 TFGLDEWPYT------SDYAEETLTK------HFDVASLKGFGI---ERLQSGIVAAGVV 229
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
++YL + + + SI I+ +Y+ + + +L ++ + +D ILD
Sbjct: 230 LHYLGETEHRNLQHITSISRIEEDRYMWLDRFTIRNLELVNSANDNAVTLFD----ILDH 285
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
TP G RLL +W+ PLK+L I ER V+ V N E + + ++ + D++ L
Sbjct: 286 TSTPMGARLLQKWIIMPLKELKPIEERLGMVDFFVKNEEIQQEFLTH-IKQIGDIERLIS 344
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS-----LKMMD 376
++G ++ G ++ V+ LI I V+N+ A++ NT L + L + +
Sbjct: 345 KVGLQRVGPREL------VALKRALIHI--EAVKNLAANSKNTFLIKIADQLNPCLAIRE 396
Query: 377 R-------------------KDAV---MDKM-------KEYLESTARR-LNLVADKTIKL 406
R D V +D++ K+YL +R ++K+
Sbjct: 397 RIERELQPEPPALLVKGNVISDGVDEDLDRLRKIAFGGKDYLVQIQKREAEATGIPSLKI 456
Query: 407 E-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQ 465
N+ G+ +T + + + + T+ R+ L Q + + + +
Sbjct: 457 SFNNVFGYYLEVTHTHKDKVPEGWIRKQTLVNAERYITPELKEYEEQILGAEEKIQAIEI 516
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
+ E++ +AGY + + + ++AQ D L+ F A YV+P + L +
Sbjct: 517 RLYNELMYETAGYIKPIQLNAFLIAQLDCLLCF--AQLAEKNHYVKPTVNK--DKVLDIK 572
Query: 526 QCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP++E L G YI NDVY S ++TGPNM GKS +R + V +AQ+G
Sbjct: 573 GGRHPVIEKQLPVGQEYITNDVYLDSDSQQIIMITGPNMAGKSAILRQTALIVLMAQMGS 632
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP +A + +VD+IFTRVGA+D+ G STFM+EM ETA+++ ++NSL+++DE+GRG
Sbjct: 633 FVPAKAADVGLVDKIFTRVGASDNISSGESTFMVEMNETASILNNISDNSLILLDEIGRG 692
Query: 644 TSTFDGFGMACSIARELASH--RQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNL 701
TST+DG +A +IA L H +P TLFATH+HE+ L+ +P +N VS E + +
Sbjct: 693 TSTYDGISIAWAIAEFLHQHPTSRPKTLFATHYHELNELANTMPRIKNFNVSVKEMTNKV 752
Query: 702 VLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNRE-E 760
+ L ++ PG S+G+H AKMAG P ++ +A +++K+ E D T + +
Sbjct: 753 IFLRKLVPGGSEHSFGIHVAKMAGMPPKLIGRANEILKKLEI---------DRTEGQSIK 803
Query: 761 EYFKTVQEGEYQMFDFLQQCLSLSKQKDT 789
+ K VQ YQ+ F L K +DT
Sbjct: 804 DSIKKVQNQAYQLQMFAIDDPVLVKIRDT 832
>gi|347534571|ref|YP_004841241.1| DNA mismatch repair protein mutS [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504627|gb|AEN99309.1| DNA mismatch repair protein mutS [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 873
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 267/520 (51%), Gaps = 38/520 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL ++D +T G R L QW+++PL I R + V L++N R L E AL +
Sbjct: 277 TLLWVVDDTKTAMGGRKLKQWVERPLIKQKEIEARQSLVETLLDNYYERNELRE-ALIKV 335
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL----------------------- 350
D++ LA RI +D ++ + Q+PK+ +L
Sbjct: 336 YDLERLAGRISFGGGNARDLIQLKSSLDQIPKIKHVLNQLDTPEFQQIYERLDDVHDVYQ 395
Query: 351 ---ESLVQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYL---ESTARRLNLVADKTI 404
E++V++ S + + +D+ M K++L E+ R+L +++ I
Sbjct: 396 LIDEAIVEDAPISVKDGGIIKHGYNDQLDKYRDAMQNGKKWLADLEAKERQLTGISNLKI 455
Query: 405 KLENSPQGFAYRITMKLNNSIDD-RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
N G+ +T +DD RY + T+ RF L + Q + +
Sbjct: 456 GY-NRVFGYFIEVTKGNIAKLDDSRYNRVQTLTNAERFSTPELKAKESLILEAQEKSRSL 514
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+ I ++ + +L+ ++ DVL SF A+ + +V+P K L
Sbjct: 515 EYEIFAKIREQIKQQIPRVQKLASGISSIDVLQSF--ATISEREQFVKP--KFNHDKLLK 570
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
L RHP+VE + G Y+PNDV + L+TGPNM GKSTY+R + + V LAQ+G
Sbjct: 571 LINARHPVVEQVMGSQKYVPNDVLM-DAKTKILLITGPNMSGKSTYMRQLALIVILAQMG 629
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVP +SA + + DQIFTR+GAAD G STFM+EMKE I+ TENSL++ DELGR
Sbjct: 630 CFVPAESAVMPIFDQIFTRIGAADDLISGKSTFMVEMKEANQAIQNATENSLILFDELGR 689
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GTST+DG +A +I + T+F+TH+HE+ LS + +NV V A E++ +LV
Sbjct: 690 GTSTYDGVALAQAIIEYIHDKVHAKTMFSTHYHELTGLSDELKQLKNVHVGASEKDGHLV 749
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L++V G+ KSYG++ A++AG P D+L +A+ ++ +E
Sbjct: 750 FLHKVLDGAADKSYGINVAQLAGLPTDLLARAQSVLDHFE 789
>gi|384181579|ref|YP_005567341.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324327663|gb|ADY22923.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 892
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKA 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|116629083|ref|YP_814255.1| DNA mismatch repair protein MutS [Lactobacillus gasseri ATCC 33323]
gi|238853826|ref|ZP_04644191.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 202-4]
gi|282852792|ref|ZP_06262134.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 224-1]
gi|122273919|sp|Q045Q5.1|MUTS_LACGA RecName: Full=DNA mismatch repair protein MutS
gi|116094665|gb|ABJ59817.1| DNA mismatch repair protein MutS [Lactobacillus gasseri ATCC 33323]
gi|238833521|gb|EEQ25793.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 202-4]
gi|282556534|gb|EFB62154.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 224-1]
Length = 857
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 300/613 (48%), Gaps = 84/613 (13%)
Query: 176 DDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVM 235
DD+E+K + L L+T L L Q + S + ++Y+ MS V
Sbjct: 217 DDAEIKATKQLVAYLLSTQKRSLAHL--------------QVA-QSYEPTQYLQMSHTVQ 261
Query: 236 SSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNIL 295
++L ++ + + +++ SL +LD+ T G RLL W+++PL + I R V L
Sbjct: 262 TNLELI--KSAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLSVTEITRRQEMVQAL 319
Query: 296 VNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI-SILES-- 352
+++ R + + +L+G+ D++ L RI ++ ++ + +P ++ S+LE+
Sbjct: 320 LDDYFTREKVID-SLKGVYDLERLTGRIAFGSVNAREMLQLAHSLGAIPDILNSLLETNN 378
Query: 353 -----------LVQNVEASNLNTILSSLQSL------------KMMDRKDAVMDKMKEYL 389
++ + +NTI+ + L +DR M+ K++L
Sbjct: 379 PHLQNFAKQIDPLKGIHDLIVNTIVDNPPLLTTEGGLIREGVSDQLDRYRDAMNNGKKWL 438
Query: 390 ---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID-DRYTILDTVRGGVRFQDDR 445
ES R + + + + N G+ +T + + DRYT T+ R+
Sbjct: 439 SEMESHEREVTGINNLKVGY-NKVFGYYIEVTNSNKDKVPTDRYTRKQTLTNAERY---- 493
Query: 446 LATANTQYQAIQREYETHQQSIVEEVIGISAG---------------YTQTLNQLSDVLA 490
I + + H+ S++ E S G Y L +L+ +A
Sbjct: 494 ----------ITPDLKEHE-SLILEAEAKSTGLEYDLFVKLRENVKKYIPALQKLAKQVA 542
Query: 491 QFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKS 549
DVL +F A+ YVRP V+N RHP+VE + SYIPNDV
Sbjct: 543 SLDVLTNF--ATVSEQNNYVRPDFTVDKQEINVVN-GRHPVVEQVMTAGSYIPNDVKMDQ 599
Query: 550 GEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQY 609
F L+TGPNM GKSTY+R + + +AQIGCFVP DSAT+ + DQIFTR+GAAD
Sbjct: 600 DTDIF-LITGPNMSGKSTYMRQMALIAIMAQIGCFVPADSATLPIFDQIFTRIGAADDLI 658
Query: 610 RGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTL 669
G STFM+EM E ++ T+ SLV+ DE+GRGT+T+DG +A +I + L TL
Sbjct: 659 SGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTL 718
Query: 670 FATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
FATH+HE+ L + + +N+ V A E+ L+ L+++ PG +SYG+H A++AG P
Sbjct: 719 FATHYHELTDLDQTLKHLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPHK 778
Query: 730 MLEQARDLMKEYE 742
+L +A ++K E
Sbjct: 779 VLREATTMLKRLE 791
>gi|42782853|ref|NP_980100.1| DNA mismatch repair protein MutS [Bacillus cereus ATCC 10987]
gi|222097215|ref|YP_002531272.1| DNA mismatch repair protein muts [Bacillus cereus Q1]
gi|48428286|sp|P61665.1|MUTS_BACC1 RecName: Full=DNA mismatch repair protein MutS
gi|254766615|sp|B9IV59.1|MUTS_BACCQ RecName: Full=DNA mismatch repair protein MutS
gi|42738780|gb|AAS42708.1| DNA mismatch repair protein MutS [Bacillus cereus ATCC 10987]
gi|221241273|gb|ACM13983.1| DNA mismatch repair protein MutS [Bacillus cereus Q1]
Length = 892
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKM 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|218904897|ref|YP_002452731.1| DNA mismatch repair protein MutS [Bacillus cereus AH820]
gi|226723050|sp|B7JJ47.1|MUTS_BACC0 RecName: Full=DNA mismatch repair protein MutS
gi|218535511|gb|ACK87909.1| DNA mismatch repair protein MutS [Bacillus cereus AH820]
Length = 892
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|303228559|ref|ZP_07315387.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-134-V-Col7a]
gi|302516806|gb|EFL58720.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-134-V-Col7a]
Length = 873
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 164/534 (30%), Positives = 274/534 (51%), Gaps = 39/534 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LDR TP G RLL QW++ PL D+ I R AAV L++ R + Y L +
Sbjct: 288 TLLDVLDRTLTPMGARLLKQWLESPLTDISTIQRRQAAVAELISRNGERCEIQSY-LDCI 346
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ------NVEASN------ 361
D + + RI +D + E + LP + ++L+ N N
Sbjct: 347 YDFERIVGRIETGSVSPRDFTSLRESLQVLPHIKNLLKEFSGLSLSSINTRIDNHADIYD 406
Query: 362 -LNTILSSLQSLKMMDRK------DAVMDKMKEYLESTARRLNLVADKT-----IKLE-- 407
LN ++ +L + D + + +D+++ ++ L + DK +KL+
Sbjct: 407 LLNRAIAEQPALTLKDGRVIRDGYNEELDELRSLATNSEVWLQKLEDKAREETGLKLKTK 466
Query: 408 -NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
N G+ + ++ + + + T R+ L + + + + + +Q
Sbjct: 467 YNKVFGYFFEVSKSQIDKVPAYFIRKQTTVNAERYITPDLKEFEIKILSAKEKIVSLEQQ 526
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+ +++ G + + + + LA+ DVL S +A+ Y+ C + G + +
Sbjct: 527 LYQDLRNQIKGVIKKVQETARALAELDVLAS--LATVAYESNYI--CPNIVLNGQINIRD 582
Query: 527 CRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
RHP++E L+ V ++PNDV + F L+TGPNM GKSTY+R + + + +AQIG F
Sbjct: 583 GRHPVIEKFLKREV-FVPNDVVLNHDDEEFMLITGPNMAGKSTYMRQVAILMIMAQIGSF 641
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
+P ATIS VD++FTRVGA+D G STFM+EMKE A +++ T SL+I+DE+GRGT
Sbjct: 642 IPAREATISPVDRVFTRVGASDDISTGQSTFMVEMKEVAYILENATSKSLIILDEIGRGT 701
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
STFDG +A ++ + H TLFATH+HE+ L V P +N V+ E+ ++ L
Sbjct: 702 STFDGLSIAQAVVEHICKHIHAKTLFATHYHELIPLEDVYPRLKNYTVAVKEKGKDIAFL 761
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNR 758
++ G +SYG+H AK+AG P +L++A +++ SL+ + D+ NNR
Sbjct: 762 RRIIRGGADRSYGIHVAKLAGLPAQVLKRAEVILE----SLEEQNTDTDDLNNR 811
>gi|228947490|ref|ZP_04109780.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228812010|gb|EEM58341.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 886
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|229123283|ref|ZP_04252487.1| DNA mismatch repair protein mutS [Bacillus cereus 95/8201]
gi|228660059|gb|EEL15695.1| DNA mismatch repair protein mutS [Bacillus cereus 95/8201]
Length = 886
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLNQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|294496664|ref|YP_003543157.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
gi|292667663|gb|ADE37512.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
Length = 881
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 189/686 (27%), Positives = 338/686 (49%), Gaps = 47/686 (6%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
GVA +D+ T +F +I D + + + + P EC++ + + + + + + L K
Sbjct: 139 GVAFLDVSTGEFLTTQINDQPPFDGIAGEVARMRPAECIVLPQLMENEE--LQSRLAELK 196
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ T + + S + D + S L+ A C +L LE
Sbjct: 197 LSTT--EFDAASTDPAYADRHLCEHLGVSTLEGMGCAGLPFAKMAASC--ALEYALETQM 252
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
E N QF +H+ S+++ + S + +L V+ T ++L +LD +TP G R
Sbjct: 253 RELNHVQF-LHTYSSSEFMILDSITLRNLEVVKNVRGEGRDT--TILQVLDETKTPMGSR 309
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL +W+ +PL ++ I +R AV L +NT R ++ + L + D++ L R+ +
Sbjct: 310 LLQKWILKPLLNVSHINKRLDAVEELSDNTLLRFDVRSH-LSYVKDVERLVGRVVYGNSN 368
Query: 330 LKDCYRVYEGVSQLPKLISILES--------LVQNVEASNLNTILSSLQSLKMMDR---- 377
+D + + + +P L+ LE +VQ ++ L+ L +++
Sbjct: 369 ARDLVALKKSLQAIPSLLETLEGEHKAMLARIVQGMKDFREIDTLTDLIERAIVEEPPLS 428
Query: 378 -------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT 418
K +++ E E ++ + +A K++K+ N G+ +T
Sbjct: 429 VREGGLIKPGYSEELDELKEISSNAKSWIASFQQKERDRTGIKSLKVGYNKVIGYYLEVT 488
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGY 478
+ + D Y T+ RF +L + + + + + EVI + A +
Sbjct: 489 KPNISQVPDDYIRKQTMTNAERFYTPQLKDWEGKILSADEKRVALEYELFNEVISVVANH 548
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV 538
++ L +++ +L + DVL S +A YVRP + +++ Q RHP+VE
Sbjct: 549 SKQLQEMAVLLGELDVLAS--LAEVAVNNNYVRPSI--TDDCRILIRQGRHPVVENSVDG 604
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
+IPNDV + F L+TGPNM GKSTY+R + + V +AQ G FVP A++ +VD+I
Sbjct: 605 GFIPNDVEMDCSDEQFLLITGPNMAGKSTYMRQVALIVIMAQAGSFVPASHASVGIVDRI 664
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTRVGA D G STFM+EM E A ++ T SLV++DE+GRGTST+DG+ +A ++
Sbjct: 665 FTRVGAFDDLASGQSTFMVEMVELANILNNSTAKSLVLLDEIGRGTSTYDGYSIAKAVVE 724
Query: 659 ELASH-RQPF-TLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ + RQ +LFATH+H++ ++ + +N ++ E D+LV L ++ PG+ KSY
Sbjct: 725 YIHNKGRQGVRSLFATHYHQLTEIAESLKRVKNYHIAVKEDGDDLVFLRKIVPGATDKSY 784
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
G+H A++AG P + ++A+ ++++ E
Sbjct: 785 GIHVARLAGVPHKVTKRAQSILEDIE 810
>gi|52141719|ref|YP_085110.1| DNA mismatch repair protein MutS [Bacillus cereus E33L]
gi|81686627|sp|Q636Q7.1|MUTS_BACCZ RecName: Full=DNA mismatch repair protein MutS
gi|51975188|gb|AAU16738.1| DNA mismatch repair protein, MutS family [Bacillus cereus E33L]
Length = 894
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TT 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKA 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|386737592|ref|YP_006210773.1| DNA mismatch repair protein mutS [Bacillus anthracis str. H9401]
gi|384387444|gb|AFH85105.1| DNA mismatch repair protein mutS [Bacillus anthracis str. H9401]
Length = 886
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPVTEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|82750895|ref|YP_416636.1| DNA mismatch repair protein MutS [Staphylococcus aureus RF122]
gi|123549102|sp|Q2YXR9.1|MUTS_STAAB RecName: Full=DNA mismatch repair protein MutS
gi|82656426|emb|CAI80846.1| DNA mismatch repair protein [Staphylococcus aureus RF122]
Length = 872
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 287/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S LVQ + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S D K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASADKKS 792
>gi|312873745|ref|ZP_07733790.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2052A-d]
gi|311090743|gb|EFQ49142.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2052A-d]
Length = 854
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/572 (30%), Positives = 301/572 (52%), Gaps = 51/572 (8%)
Query: 220 HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPL 279
S + ++Y+ MS V ++L ++ + + + + SL +LD+ T G RLL W+++PL
Sbjct: 245 QSYEPNQYLQMSHIVQTNLELI--KSAKTGKKMGSLFWLLDKTSTAMGGRLLKSWIERPL 302
Query: 280 KDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEG 339
L I R V L ++ +R + ++ L+G+ D++ L R+ A ++ ++ +
Sbjct: 303 ISLSEIKSRQLVVTALFDDYFSREKIIKH-LQGVYDLERLTGRVALGSANARELLQLADS 361
Query: 340 VSQLPKLISILES----LVQN-------------------VEASNLNT----ILSSLQSL 372
++ +P++I+IL + ++ N VE L+T I+ S S
Sbjct: 362 LAVVPEIINILANSKNEVLNNFAQKIDPLKGIHDLIVKTIVENPPLSTKEGGIIKSGVSS 421
Query: 373 KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQG----FAYRITMKLNNSIDDR 428
++ +DA+M+ K++L A N +KT + N G F Y I ++ NS D+
Sbjct: 422 QLDRYRDAMMNG-KKWLADMA---NSEREKT-GINNLRVGYNKVFGYYI--EVTNSYKDK 474
Query: 429 YTILDTVRGGVRFQDDRLATAN-TQYQAIQREYETHQQSIVEEVIG----ISAGYTQTLN 483
+ +R +R T +++A+ E + + + E+ Y L
Sbjct: 475 VPLDRYMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYIPALQ 534
Query: 484 QLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIP 542
+L+ L+ DVL +FS+ S YV P + ++N RHP+VE + YIP
Sbjct: 535 KLAKQLSSLDVLATFSLLS--EQNNYVCPQFSQDSSAINIVN-GRHPVVEKVMSDEEYIP 591
Query: 543 NDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRV 602
NDV + + L+TGPNM GKSTY+R + + + +AQIGCF+P DSA + + D+IFTR+
Sbjct: 592 NDVKMDE-QTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKIFTRI 650
Query: 603 GAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELAS 662
GA D G STFM+EM E T +K T+ SL++ DE+GRGT+T+DG +A +I + L
Sbjct: 651 GAGDDLISGKSTFMVEMSEANTALKNATKRSLILFDEIGRGTATYDGMALAGAIIKYLHD 710
Query: 663 HRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAK 722
TLFATH+HE+ L + + +N+ V A ++ +L+ L+++ PG+ +SYG+H A+
Sbjct: 711 KVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGHLIFLHKILPGAADQSYGIHVAQ 770
Query: 723 MAGYPEDMLEQARDLMKEYEYSLDTKTPSGDE 754
+AG P +L +A ++K+ E D + DE
Sbjct: 771 LAGLPTKVLREATHMLKQLEKHSDNQAAFSDE 802
>gi|291538969|emb|CBL12080.1| DNA mismatch repair protein MutS [Roseburia intestinalis XB6B4]
Length = 892
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 203/719 (28%), Positives = 347/719 (48%), Gaps = 87/719 (12%)
Query: 69 SHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL 128
++I+C++ L + G+++ D+ T +++ E+ D L I + +P E +
Sbjct: 136 NYIMCIV--------YLADKYGISLADISTGDYFVTEV---DTERKLIDEINKFAPSEII 184
Query: 129 LPAEY------LNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN 182
+ L+D KN++ + + + FS+E + F L+
Sbjct: 185 CNESFYMSGVDLSDMKNRL-------GIAVYSLEAWYFSDETAENTLKE--HFKVQSLEG 235
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
L C T A +L+ YL D N +IH KY+ + S+ +L ++
Sbjct: 236 LGLSDYACGTIAAG---ALLRYLYETQKNDLGNLSAIHPYSTGKYMIIDSSTRRNLELV- 291
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ Q SLL +LD+ +T G R L +++QPL D I R A+ L ++ R
Sbjct: 292 -ETLREKQKRGSLLWVLDKTKTAMGARTLRAYVEQPLIDKTEIELRQEAIGELNDHVITR 350
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE----SLVQNVE 358
L EY L + D++ L R+ + A +D +S LP + S+L+ +L++N++
Sbjct: 351 EELREY-LNPIYDLERLITRVTYRTANPRDLIAFKNSISMLPPIKSLLDEFDGALLKNIQ 409
Query: 359 ASNLNTI--LSSLQSLKMMDR-----------KDAVMDKMKEY-------------LEST 392
++++ + L SL +M+ K+ + + +Y LE+
Sbjct: 410 -NDIDAMEELCSLVDRSIMEEPPISVREGGLIKEGYNEDVDKYRNAKTEGKTWLAELEAK 468
Query: 393 ARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLA----- 447
R + + IK N G+ +T + + D +T T+ R+ L
Sbjct: 469 EREKTGIKNLKIKY-NKVFGYYLEVTNSYKDLVPDYFTRKQTLANAERYITPELKELEDM 527
Query: 448 TANTQYQAIQREYETH---QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+ + + EY+ + I EEV+ I + + +A DV VS ++ +
Sbjct: 528 ILGAEDKLVSLEYDLFCEVRNKIAEEVVRIQ--------RTAKAIANLDVFVSLAVVAD- 578
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
Y RP M +G + + RHP+VE + +I ND Y +G ++TGPNM
Sbjct: 579 -QNNYCRPKM--TNSGVIDIKGGRHPVVEKMITNDMFIDNDTYLDNGNNRIAIITGPNMA 635
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + V +AQIG FVP SA IS+VD+IFTRVGA+D G STFM+EM E A
Sbjct: 636 GKSTYMRQAALIVLMAQIGSFVPATSAKISIVDRIFTRVGASDDLASGQSTFMVEMNEVA 695
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR--QPFTLFATHFHEIALLS 681
+++ T NSL+++DE+GRGTSTFDG +A ++ +++ R TLFATH+HE+ L
Sbjct: 696 NILRNATSNSLLVLDEIGRGTSTFDGLSIAWAVVEHISNPRLLGAKTLFATHYHELTELE 755
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
+ N ++ E+ D++V L ++ G KSYG+ AK+AG P+ ++E+A+++++E
Sbjct: 756 GKLNNVHNYCIAVKEKGDDIVFLRKIVQGGADKSYGIQVAKLAGVPDSVIERAKEIVEE 814
>gi|416839346|ref|ZP_11902740.1| DNA mismatch repair protein MutS [Staphylococcus aureus O11]
gi|416844731|ref|ZP_11905417.1| DNA mismatch repair protein MutS [Staphylococcus aureus O46]
gi|323441077|gb|EGA98784.1| DNA mismatch repair protein MutS [Staphylococcus aureus O11]
gi|323443946|gb|EGB01557.1| DNA mismatch repair protein MutS [Staphylococcus aureus O46]
Length = 872
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 287/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S LVQ + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S D K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASADKKS 792
>gi|75760974|ref|ZP_00740980.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491538|gb|EAO54748.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 803
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 189 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 247
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 248 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQSADPCESLT 306
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 307 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 366
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 367 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 426
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 427 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 477
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 478 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 536
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 537 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 596
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 597 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 656
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 657 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 716
Query: 758 REEE 761
+E+E
Sbjct: 717 QEQE 720
>gi|312135299|ref|YP_004002637.1| DNA mismatch repair protein muts [Caldicellulosiruptor owensensis
OL]
gi|311775350|gb|ADQ04837.1| DNA mismatch repair protein MutS [Caldicellulosiruptor owensensis
OL]
Length = 863
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 266/526 (50%), Gaps = 46/526 (8%)
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
+SLLGILD+ +T G RLL +W+++PL D+ I R +V L ++ + + E R
Sbjct: 277 NSLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKSSYSILVQIEELLSR- 335
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL 372
+ D++ L+ + K KD + + LP L +L S A L I L +L
Sbjct: 336 MYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSF----SAQLLKEIYEGLDTL 391
Query: 373 K------------------------------MMDRKDAVMDKMKEYL-ESTARRLNLVAD 401
+ +DR + KE L + + NL
Sbjct: 392 EDIYALVDSSINEGAPVTLKEGGIIKDGFNEEVDRLRNISKNSKELLVQYEEKERNLTGI 451
Query: 402 KTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQ-YQAIQRE 459
K +++ N G+ +T + + DRY T+ R+ + L + A Q+
Sbjct: 452 KNLRIGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLANAERYVTEELKKLEDEILGADQKL 511
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
E Q E I A + + + + +A DVL SF A YVRP + +G
Sbjct: 512 IELEYQLFCEIRDRIEAQ-IERIQKTASYIAILDVLCSF--ARIAIDNEYVRPNVY-LG- 566
Query: 520 GSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+ + RHP+VE + G ++IPND E ++TGPNM GKSTY+R + + V +
Sbjct: 567 DKIYIKNGRHPVVEKMIGRGNFIPNDTELDQVENRILIITGPNMAGKSTYMRQVALIVIM 626
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQ+GCFVP D A I +VD+IF+R+GA+D G STFM+EM E A ++K T SL+I D
Sbjct: 627 AQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMSEVANILKNATPKSLIIFD 686
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
E+GRGTST+DG +A ++ +A + TLFATH+HE+ L IP +N +V E
Sbjct: 687 EVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVKNYRVDVKE 746
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ N++ L ++ G C SYG+H A++AG PED+L++A +++K+ E
Sbjct: 747 EGKNVIFLRKIVRGGCDSSYGIHVARLAGIPEDVLKRAEEILKQLE 792
>gi|402556108|ref|YP_006597379.1| DNA mismatch repair protein MutS [Bacillus cereus FRI-35]
gi|401797318|gb|AFQ11177.1| DNA mismatch repair protein MutS [Bacillus cereus FRI-35]
Length = 892
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|269122808|ref|YP_003305385.1| DNA mismatch repair protein MutS [Streptobacillus moniliformis DSM
12112]
gi|268314134|gb|ACZ00508.1| DNA mismatch repair protein MutS [Streptobacillus moniliformis DSM
12112]
Length = 848
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 202/733 (27%), Positives = 360/733 (49%), Gaps = 66/733 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
++ +D+ T +F + E +D NL + I + PKE LL + L + I+ LD N
Sbjct: 136 AMSYLDITTGEFKVLECDED----NLISEIYKIEPKEILL-TQSLKEKFGSIIDKLDINI 190
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+T K N+ E ++D +V D + + + + C C+ ++Y+ M
Sbjct: 191 SIVT--KVND--AEKFLKDYFNIVSLDSYGIFGKKAMIDAC-----ACI---LDYVLAMQ 238
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + I I+ SK+V +SS+ + +L ++ Q + TY SLL +LD+C++ G R
Sbjct: 239 FNNELTIRKIEVINKSKFVEISSSTLRNLEIVKNQRDKT--TYGSLLWVLDKCKSSTGSR 296
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
L Q ++ PL +LD I +R+ + L R + L + D++ L ++
Sbjct: 297 KLKQLLQSPLLELDEINKRYDDIEYLCKEIIKREEIRN-LLDNVYDIERLLGKVIFSNEN 355
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDRKDAV-------- 381
KD + + K+ + +N++ + L I + + ++ + D +V
Sbjct: 356 GKDINALKNTIYSSFKIRDLWPEKFKNIDFNILQEIHTKIDNILLEDAPFSVREGNMIKS 415
Query: 382 -----MDKMKE--------YLESTARRLNLVADKTIKLE-NSPQGFAYRITMKLNNSIDD 427
+D+++ LE +R K +K++ N+ G+ ++ N + +
Sbjct: 416 GVNSELDELRNIMNNGTGILLEIESREREKTGIKNLKIKYNNIFGYFIEVSKSNMNMVPE 475
Query: 428 RYTILDTVRGGVRFQDDRLAT-----ANTQYQAIQREYETHQQ--SIVEEVIGISAGYTQ 480
Y T+ R+ + + + N++ + + EY + S ++E +
Sbjct: 476 TYIRKQTLSNAERYITEEIKSYEDKIINSKAKITELEYIIFKNLSSYIKE-------FKN 528
Query: 481 TLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVS 539
+LS+ LA D+L+SF+I T YVRP + RHP+VE L G +
Sbjct: 529 VFIELSNTLAYIDILISFAI--TALENNYVRP---NFNEEYFEIKDARHPVVEKLIGDNT 583
Query: 540 YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIF 599
+I N+VYF F ++TGPNM GKSTY++ I + +AQIG FVP SA +++VD+I
Sbjct: 584 FISNNVYFDDKN-RFIILTGPNMSGKSTYMKQIALISIMAQIGSFVPASSANLNMVDKIL 642
Query: 600 TRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARE 659
TR+GA+D G STFM+EM E A++I T NSL+I+DE+GRGTST+DG +A SI++
Sbjct: 643 TRIGASDDILSGQSTFMVEMSEVASIINSATTNSLIILDEVGRGTSTYDGLAIASSISKY 702
Query: 660 LASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVH 719
+ + ++FATH+HE+ L T +N ++ E+ + L + G +SYG+
Sbjct: 703 IVENINAKSIFATHYHELTELENEYETIKNYRIEVEEKNGKVNFLRTIVKGGADRSYGIE 762
Query: 720 CAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQ 779
AK+AG P+ ++ ++ L+K +E ++ K +N E E + +++ E + D L +
Sbjct: 763 VAKLAGLPKTIIRESTKLLKSFE--VEKKNGQISLFDNFEYENYDKIEKLE-ETIDNLNE 819
Query: 780 CLSLSKQKDTNRI 792
L + D N +
Sbjct: 820 KLDKLRNVDINNM 832
>gi|407979366|ref|ZP_11160182.1| DNA mismatch repair protein MutS [Bacillus sp. HYC-10]
gi|407413973|gb|EKF35644.1| DNA mismatch repair protein MutS [Bacillus sp. HYC-10]
Length = 858
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 268/525 (51%), Gaps = 49/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD +T G RLL QW+ +PL L I ER V IL+N+ R +L E L+ +
Sbjct: 272 SLLWLLDETKTAMGGRLLKQWIDRPLIRLSQIKERQEMVQILMNHFFEREDLRE-RLKQV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-------- 365
D++ LA R+ +D ++ E + Q+P + ++ SL + + AS N I
Sbjct: 331 YDLERLAGRVAFGNVNARDLIQLKESLKQVPAIKELVHSLPEEMAASRANDIDPCGDLLD 390
Query: 366 ---LSSLQSLKMMDR-----KDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRI 417
+ ++ M + KD K+ EY +++ + +A +LE + +
Sbjct: 391 LLEDALYENPPMTLKEGNLIKDGYNAKLDEYRDASRNGKDWIA----RLEQQEREYTGIR 446
Query: 418 TMKLN-NSIDDRYTILDTVRGGVRFQDD----RLATANTQYQAIQREYETHQQSIVEEVI 472
++K+ N + Y ++ R ++ R T + I E + + I+E
Sbjct: 447 SLKVGFNKVFGYY--IEVTRANTHLLEEGRYERKQTLANAERYITPELKEKEALILEAES 504
Query: 473 GIS--------------AGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
IS Y L L+ +++ D L F A+ + YVRP
Sbjct: 505 NISELEYELFSALREQVKAYIPRLQLLAKQMSELDALQCF--ATVSEKRRYVRP---EFS 559
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + Y+PND + G + L+TGPNM GKSTY+R + +
Sbjct: 560 EDEVDVVGGRHPVVEKVMDHQEYVPNDCHMGKGRQTL-LITGPNMSGKSTYMRQMALISI 618
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LAQIGCFVP AT+ + DQIFTR+GAAD G STFM+EM E + T+NSL++
Sbjct: 619 LAQIGCFVPASKATLPIFDQIFTRIGAADDLISGQSTFMVEMLEAKNAMVHATKNSLILF 678
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + H TLF+TH+HE+ +L + +NV V A E
Sbjct: 679 DEIGRGTSTYDGMALAQAIIEFVHDHIGAKTLFSTHYHELTVLESQLSELKNVHVRAEEH 738
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
E +V L+Q+K G+ KSYG+H A++A P+ ++++A+ ++ E E
Sbjct: 739 EGTVVFLHQIKEGAADKSYGIHVAQLAELPDAIIDRAQTILTELE 783
>gi|401679865|ref|ZP_10811789.1| DNA mismatch repair protein MutS [Veillonella sp. ACP1]
gi|400218992|gb|EJO49863.1| DNA mismatch repair protein MutS [Veillonella sp. ACP1]
Length = 873
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 276/535 (51%), Gaps = 41/535 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LDR TP G RLL QW++ PL D+ I R AAV L++ R + Y L +
Sbjct: 288 TLLDVLDRTLTPMGARLLKQWLESPLTDIPTIQRRQAAVAELISRNAERCEIQSY-LDCI 346
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNT--------- 364
D + + RI +D + E + LP + ++L+ + +++N+
Sbjct: 347 YDFERIVGRIETGSVSPRDFTSLRESLQVLPNIKTLLKEF-SGLSLTSINSRIDDHADIY 405
Query: 365 -----ILSSLQSLKMMDRK------DAVMDKMKEYLESTARRLNLVADKT-----IKLE- 407
++ +L + D + + +D+++ ++ L + DK +KL+
Sbjct: 406 DLLSRAIAEQPALTLKDGRVIRDGYNEELDELRSLATNSEVWLQKLEDKAREETGLKLKT 465
Query: 408 --NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQ 465
N G+ + ++ + + + T R+ L + + + + + +Q
Sbjct: 466 KYNKVFGYFFEVSKAQVDKVPAYFIRKQTTVNAERYITPDLKEFEIKILSAKEKIVSLEQ 525
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
+ +++ G + + + + LA+ DVL S +A+ Y+ C + G + +
Sbjct: 526 QLYQDLRNQIKGVIKKVQETARALAELDVLAS--LATVAYESNYI--CPNIVMNGQINIR 581
Query: 526 QCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP++E L+ V ++PNDV + F L+TGPNM GKSTY+R + + + +AQIG
Sbjct: 582 DGRHPVIEKFLKREV-FVPNDVVLNHDDEEFMLITGPNMAGKSTYMRQVAILMIMAQIGS 640
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
F+P ATIS VD++FTRVGA+D G STFM+EMKE A +++ T SL+I+DE+GRG
Sbjct: 641 FIPAREATISPVDRVFTRVGASDDISTGQSTFMVEMKEVAYILENATSKSLIILDEIGRG 700
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
TSTFDG +A ++ + H TLFATH+HE+ L V P +N V+ E+ ++
Sbjct: 701 TSTFDGLSIAQAVVEHICKHIHAKTLFATHYHELIPLEEVYPRLKNYTVAVKEKRKDIAF 760
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNR 758
L ++ G +SYG+H AK+AG P +L++A +++ SL+ + D+ NNR
Sbjct: 761 LRRIIRGGADRSYGIHVAKLAGLPAQVLKRAEVILE----SLEEQNTDSDDLNNR 811
>gi|386319414|ref|YP_006015577.1| DNA mismatch repair protein MutS [Staphylococcus pseudintermedius
ED99]
gi|323464585|gb|ADX76738.1| DNA mismatch repair protein MutS [Staphylococcus pseudintermedius
ED99]
Length = 865
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/526 (32%), Positives = 275/526 (52%), Gaps = 49/526 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL ++D+ +TP G R L QW+ +PL I +RH AV+ ++ R L +Y L +
Sbjct: 271 TLLWLMDKTKTPMGARRLKQWVDRPLIQQAEIAKRHDAVDQFLHYFIERDTLRDY-LTEV 329
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEA-----SNLNTILSS 368
D++ L R+ KD ++ ++Q+P + ++L+S+ A L+ +L
Sbjct: 330 YDIERLVGRVSFGNVNAKDLVQLKHSIAQIPAIKALLQSIEHEAIAHFNALEPLDDLLQV 389
Query: 369 LQSLKMMDR-----------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
L S ++D K +++ +YL+++ +A+ K++K+
Sbjct: 390 L-SDSLVDEPPLSVKEGGLFKAGFNEELDQYLDASKNGKQWLAELQAQERERTGIKSLKI 448
Query: 407 E-NSPQGFAYRITMKLNNSIDDR---YTILDTVRGGVRFQDDRLATA-----NTQYQAIQ 457
N G+ IT + D Y T+ RF D L Q +AI+
Sbjct: 449 SFNKVFGYYIEITRANLSQFDPSAFGYERKQTLSNAERFITDELKEKEAIILGAQDKAIE 508
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ ++ E+V Y + L Q + ++++ D L SF A YVRP
Sbjct: 509 LEYQLFV-ALREQV----KTYIERLQQQAKIISEIDCLQSF--AEIAQQYNYVRPQFSED 561
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
T LV RHP+VE + Y+PND + + + L+TGPNM GKSTY+R + +
Sbjct: 562 KTLKLV--DSRHPVVERVMDYNDYVPNDCLLNTEQFIY-LITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+G FVPC SAT+ + DQIFTR+GAAD G STFM+EM E +K T +SL+I
Sbjct: 619 IMAQMGAFVPCQSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALKYATADSLII 678
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGTST+DG +A ++ +A Q TLF+TH+HE+ L + +P+ +NV V+A E
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEYVAETSQAKTLFSTHYHELTELEQHLPSLKNVHVAADE 738
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ L+ L++VK G+ SYG+ A++A PE ++ +A+ ++ +E
Sbjct: 739 YQGELIFLHKVKDGAVANSYGIQVAQLADLPEQVIARAQVILDTFE 784
>gi|282916555|ref|ZP_06324313.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus D139]
gi|282319042|gb|EFB49394.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus D139]
Length = 872
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 287/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S LVQ + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S D K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASADKKS 792
>gi|161506972|ref|YP_001576926.1| DNA mismatch repair protein MutS [Lactobacillus helveticus DPC
4571]
gi|172048182|sp|A8YTH9.1|MUTS_LACH4 RecName: Full=DNA mismatch repair protein MutS
gi|160347961|gb|ABX26635.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
Length = 858
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 284/583 (48%), Gaps = 55/583 (9%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 217 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVAS--AKTGKKMGSLFW 273
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 274 VLDKTHTAMGGRLLKQWLARPLLNVDIINHREKMVQALLDGYFTRENTID-ALKGVYDLE 332
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNVE-----ASNLNT 364
L RI ++ ++ + +P ++ +L + ++ A ++T
Sbjct: 333 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSDVLTDFAKKIDPLKGVAELIST 392
Query: 365 ILSSLQSL-------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLEN 408
L L K +DR M+ K++L E+ R+ + + +
Sbjct: 393 TLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNK 452
Query: 409 SPQGFAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREY 460
F Y I + N DRYT T+ R+ L Q ++ EY
Sbjct: 453 V---FGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEY 509
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ Q + +EV Y L +L + LA DV F A+ Y RP
Sbjct: 510 DLFVQ-LRDEV----KKYIPALQKLGNQLAALDVYCGF--ATVAEQNNYCRPSFHTDSQD 562
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
V+N RHP+VE + SYIPNDV S F L+TGPNM GKSTY+R + + +A
Sbjct: 563 IDVVN-GRHPVVEKVMTAGSYIPNDVKMDSATNIF-LITGPNMSGKSTYMRQMALIAIMA 620
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+G FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE
Sbjct: 621 QVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANAALQYATKRSLVLFDE 680
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+T+DG +A +I + L LFATH+HE+ L + +N+ V A E+
Sbjct: 681 IGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTSLDETLDYLKNIHVGATEENG 740
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L+++ PG +SYG+H A++AG P +L +A L+K E
Sbjct: 741 KLIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLKRLE 783
>gi|228922484|ref|ZP_04085786.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837198|gb|EEM82537.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 884
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 799
Query: 758 RE 759
+E
Sbjct: 800 QE 801
>gi|434376827|ref|YP_006611471.1| DNA mismatch repair protein MutS [Bacillus thuringiensis HD-789]
gi|401875384|gb|AFQ27551.1| DNA mismatch repair protein MutS [Bacillus thuringiensis HD-789]
Length = 892
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQSADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|228902272|ref|ZP_04066432.1| DNA mismatch repair protein mutS [Bacillus thuringiensis IBL 4222]
gi|228857387|gb|EEN01887.1| DNA mismatch repair protein mutS [Bacillus thuringiensis IBL 4222]
Length = 886
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQSADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|163941457|ref|YP_001646341.1| DNA mismatch repair protein MutS [Bacillus weihenstephanensis
KBAB4]
gi|229486459|sp|A9VS13.1|MUTS_BACWK RecName: Full=DNA mismatch repair protein MutS
gi|163863654|gb|ABY44713.1| DNA mismatch repair protein MutS [Bacillus weihenstephanensis
KBAB4]
Length = 890
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|228966712|ref|ZP_04127756.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228792811|gb|EEM40369.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 793
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 179 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 237
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 238 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 296
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 297 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 356
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 357 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 416
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 417 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 467
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 468 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 526
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 527 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 586
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 587 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 646
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 647 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 706
Query: 758 REEE 761
+E+E
Sbjct: 707 QEQE 710
>gi|429759390|ref|ZP_19291889.1| DNA mismatch repair protein MutS [Veillonella atypica KON]
gi|429179666|gb|EKY20905.1| DNA mismatch repair protein MutS [Veillonella atypica KON]
Length = 873
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 277/535 (51%), Gaps = 41/535 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LDR TP G RLL QW++ PL D+ I R AAV L++ R + Y L +
Sbjct: 288 TLLDVLDRTLTPMGARLLKQWLESPLTDISTIQRRQAAVAELISRNGERCEIQGY-LDCI 346
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNT--------- 364
D + + RI +D + E + LP++ ++L+ + S++NT
Sbjct: 347 YDFERIVGRIETGSVSPRDFTSLRESLQVLPQIKNLLKEF-SGLSLSSINTRIDHHADIY 405
Query: 365 -----ILSSLQSLKMMDRK------DAVMDKMKEYLESTARRLNLVADKT-----IKLE- 407
++ +L + D + + +D+++ ++ L + DK +KL+
Sbjct: 406 DLLNRAIAEQPALTLKDGRVIRDGYNEELDELRSLATNSEVWLQKLEDKAREETGLKLKT 465
Query: 408 --NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQ 465
N G+ + ++ + + + T R+ L + + + + + +Q
Sbjct: 466 KYNKVFGYFFEVSKSQIDKVPAYFIRKQTTVNAERYITPDLKEFEIKILSAKEKIVSLEQ 525
Query: 466 SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLN 525
+ +++ G + + + + LA+ DVL S +A+ Y+ C + G + +
Sbjct: 526 QLYQDLRDQIKGVIKKVQETARALAELDVLAS--LATVAYESNYI--CPNIVMNGQINIR 581
Query: 526 QCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP++E L+ V ++PNDV + F L+TGPNM GKSTY+R + + + +AQIG
Sbjct: 582 DGRHPVIEKFLKREV-FVPNDVVLNHDDEEFMLITGPNMAGKSTYMRQVAILMIMAQIGS 640
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
F+P ATIS VD++FTRVGA+D G STFM+EMKE A +++ T SL+I+DE+GRG
Sbjct: 641 FIPAREATISPVDRVFTRVGASDDISTGQSTFMVEMKEVAYILENATSKSLIILDEIGRG 700
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
TSTFDG +A ++ + H TLFATH+HE+ L V P +N V+ E+ ++
Sbjct: 701 TSTFDGLSIAQAVVEHICKHIHAKTLFATHYHELIPLEDVYPRLKNYTVAVKEKGKDIAF 760
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNR 758
L ++ G +SYG+H AK+AG P +L++A +++ SL+ + D+ NNR
Sbjct: 761 LRRIIRGGADRSYGIHVAKLAGLPAQVLKRAEVILE----SLEEQNTDTDDLNNR 811
>gi|119487780|ref|ZP_01621289.1| DNA mismatch repair protein [Lyngbya sp. PCC 8106]
gi|119455613|gb|EAW36750.1| DNA mismatch repair protein [Lyngbya sp. PCC 8106]
Length = 886
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 267/537 (49%), Gaps = 55/537 (10%)
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
Y SLL LD+ TP G R L +W+ QPL DL I RH + VNN E R ++ + LR
Sbjct: 324 YGSLLWALDKTSTPMGSRALRRWLLQPLLDLKGIRARHDTIQEFVNNHELRQDIQQI-LR 382
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISI-----------LESLVQNVEAS 360
+ D++ L R+G A KD + + +++LP+L ++ L++L Q++E
Sbjct: 383 QIYDLERLTGRVGNSTANAKDLVSLADSLAKLPQLATVAEQGKSPYLKALQNLPQSLEKV 442
Query: 361 NLNTILSSLQSLKMMDRK--------DAVMDKMKEY----------LESTARRLNLVADK 402
S ++S + ++ DA +D+M+ LE R +
Sbjct: 443 AEKITHSLVESPPISVKEGELIRPEVDANLDEMRSLAVEDQQWIANLEVQERERTGIPTL 502
Query: 403 TIKLENSPQGFAYRITMKLNNS--IDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+ + F Y I++ + D Y T+ R+ L + + +
Sbjct: 503 KVGFNKT---FGYYISISRGKAELAPDDYIRKQTLTNEERYITPELKEREVRILTAKEDL 559
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ I + A YT T+ +S +A DVL +A + Y P M +
Sbjct: 560 NQTEYDIFVRLRSEVAEYTDTIRNVSKAVAAIDVLCG--LADVAIRQSYCCPEM--IEGR 615
Query: 521 SLVLNQCRHPIVE--LQGGVSYIPNDVYFKS-------------GEVSFNLVTGPNMGGK 565
L + RHP+VE L G ++PN S ++TGPN GK
Sbjct: 616 ELKIIDGRHPVVEKLLPPGF-FVPNTAQLGSRIPDKEDEELTPYSYPDLIILTGPNASGK 674
Query: 566 STYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATV 625
S Y+R IG+ +AQ+G F+P SA +S+ D+IFTRVGA D G STFM+EM ETA +
Sbjct: 675 SCYLRQIGLIQLMAQMGSFIPASSAQLSLCDRIFTRVGAVDDLATGQSTFMVEMNETANI 734
Query: 626 IKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP 685
+ TE SLV++DE+GRGT+TFDG +A S+A LA+ Q T+FATH+HE+ L+ ++
Sbjct: 735 LNHATEKSLVLLDEIGRGTATFDGLSIAWSVAEYLAAEIQAKTIFATHYHELNELASILE 794
Query: 686 TFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
N QV+ E D +V L+QV+PG KSYG+ ++AG P+ ++++AR +M++ E
Sbjct: 795 NVANYQVTVKELPDKIVFLHQVQPGGADKSYGIEAGRLAGLPDVVIQRARQVMRQIE 851
>gi|417903438|ref|ZP_12547285.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21269]
gi|341850059|gb|EGS91192.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21269]
Length = 872
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 287/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S LVQ + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S D K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASADKKS 792
>gi|295692267|ref|YP_003600877.1| DNA mismatch repair protein muts [Lactobacillus crispatus ST1]
gi|295030373|emb|CBL49852.1| DNA mismatch repair protein mutS [Lactobacillus crispatus ST1]
Length = 858
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 296/610 (48%), Gaps = 49/610 (8%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 217 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVAS--AKTGKKMGSLFW 273
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 274 VLDKTHTAMGGRLLKQWLARPLLNMDEINHREEMVQALLDGYFTRENAVD-ALKGVYDLE 332
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------EASNLNTILSSLQS 371
L RI ++ ++ + +P ++ LE ++ + L + + S
Sbjct: 333 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALEQSDSDILVDFAKKIDPLKGVAEMITS 392
Query: 372 LKMMDRK-------------DAVMDKMKEYLESTARRL-NLVADKTIK--LENSPQG--- 412
+ D D +D+ ++ + + + L + AD+ K ++N G
Sbjct: 393 TIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLKVGYNK 452
Query: 413 -FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYETH 463
F Y I + N DRYT T+ R+ L Q ++ EY+
Sbjct: 453 VFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLF 512
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+ + E+V Y L +L LA DV F A+ Y RP V
Sbjct: 513 VK-LREDV----KKYIPALQKLGGQLAALDVYCGF--ATVAEQNNYCRPTFHADNQDINV 565
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
N RHP+VE + SYIPNDV G + L+TGPNM GKSTY+R + + +AQ+G
Sbjct: 566 TN-GRHPVVEKVMTAGSYIPNDVKMDEG-TNIYLITGPNMSGKSTYMRQMALIAIMAQVG 623
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE+GR
Sbjct: 624 SFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVLFDEIGR 683
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + L LFATH+HE+ ++ + +N+ V A E+ L+
Sbjct: 684 GTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTVMDETLDHLKNIHVGATEENGKLI 743
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEY 762
L+++ PG +SYG+H A++AG P ++L +A L+K E P + + E
Sbjct: 744 FLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLKRLEAQGSELAPVSQQLDLFAEPV 803
Query: 763 FKTVQEGEYQ 772
+V+E E Q
Sbjct: 804 ENSVEETETQ 813
>gi|423581980|ref|ZP_17558091.1| DNA mismatch repair protein mutS [Bacillus cereus VD014]
gi|401212859|gb|EJR19600.1| DNA mismatch repair protein mutS [Bacillus cereus VD014]
Length = 890
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTI 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|229081021|ref|ZP_04213534.1| DNA mismatch repair protein mutS [Bacillus cereus Rock4-2]
gi|228702335|gb|EEL54808.1| DNA mismatch repair protein mutS [Bacillus cereus Rock4-2]
Length = 884
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 799
Query: 758 RE 759
+E
Sbjct: 800 KE 801
>gi|172087862|emb|CAQ35087.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087874|emb|CAQ35093.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
Length = 872
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 287/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S LVQ + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S D K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASADKKS 792
>gi|124004833|ref|ZP_01689676.1| DNA mismatch repair protein MutS [Microscilla marina ATCC 23134]
gi|123989511|gb|EAY29057.1| DNA mismatch repair protein MutS [Microscilla marina ATCC 23134]
Length = 814
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 199/695 (28%), Positives = 345/695 (49%), Gaps = 75/695 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +D+ T +F+ E D +Y ++ ++ +P E L +K T +D
Sbjct: 81 GIAFLDISTGEFFTAE-GDFEY---IDKLLQSFNPSEILF-------SKTGRQTFVD--- 126
Query: 150 VCMTGRKKNEFSEE-----DLMQDV-NRLVRFDDSELKNARL--LPEMCLTTATHCLRSL 201
R F EE + QD+ NR F LK + LPE ++
Sbjct: 127 -LFKDRFNAFFLEEWFFTYNFGQDILNR--HFKTKSLKGFGIADLPEGIAAAG-----AI 178
Query: 202 INYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVL-PQQGSTSAQTYDSLLGILD 260
++YL ++ + + SI I+ ++YV + + +L +L PQQ + SL+ +LD
Sbjct: 179 LHYLTETHHNNIQHISSIGRIEANRYVWLDKFTIRNLELLFPQQENGV-----SLIQVLD 233
Query: 261 RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLA 320
TP G RLL +W+ PLKD I ER + V ++ + + ++ ++ L+ D++ L
Sbjct: 234 NTVTPMGARLLRKWVALPLKDKQRIEERLSIVESILQDNDLLEDITQH-LKQTGDIERLI 292
Query: 321 MRIGRKKAGLKDCYRVYEGVSQLPKLISILES------------------LVQNVEASNL 362
++ ++ ++ ++ +G+ Q L IL+ LV ++ L
Sbjct: 293 SKVASRRVKPRELLQIKKGLIQAASLKVILQHHPLPQFQKFANQLNECQFLVDKIDGELL 352
Query: 363 NTILSSLQSLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTI--------KLE-NSPQG 412
+ + L ++ K + +D++ E + ++ + L V +K I KL+ N G
Sbjct: 353 DEPKNVLNEGGLIKPKVNDELDELHEIVYNSKQYLEKVREKAIEETGIQSLKLDYNKVFG 412
Query: 413 FAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQ-YQAIQREYETHQQSIVEEV 471
F +T K + + + T+ R+ + L + A +R +E Q + E+
Sbjct: 413 FYLEVTNKYKHQVPKEWIRKQTLVNAERYITEELKVYEDKIVHAEERIWELESQ-LYHEL 471
Query: 472 IGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPI 531
+ + +T + Q + +LA D LVSF A Y +P + ++ + RHP+
Sbjct: 472 VLQAGDFTNPIQQNARILATLDCLVSF--AFIARKYNYTKPTVNE--GKAINIKAGRHPV 527
Query: 532 VELQ--GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
+E Q YIPND + ++TGPNM GKS +R + + +AQ+G FVP D+
Sbjct: 528 IERQLLAEEPYIPNDTLLDDEDQQIMVITGPNMSGKSALLRQVALITLMAQVGSFVPADA 587
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A I +VD+IFTRVGA+D+ +G STFM+EM ETA+++ +E SLV++DE+GRGTST+DG
Sbjct: 588 ADIGIVDKIFTRVGASDNIAKGESTFMVEMMETASIMNNLSERSLVLMDEIGRGTSTYDG 647
Query: 650 FGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
+A +I L +R+ P TLFATH+HE+ L++ +P +N V+ E + +V + ++
Sbjct: 648 ISIAWAILEFLHDYRKGRPKTLFATHYHELNELAKDMPRIKNFHVTVKEVGNKVVFMRKL 707
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
G S+G+H A+MAG P ++ +A D+M E
Sbjct: 708 ATGGSEHSFGIHVARMAGMPRRIVLRADDIMHHLE 742
>gi|340786874|ref|YP_004752339.1| DNA mismatch repair protein MutS [Collimonas fungivorans Ter331]
gi|340552141|gb|AEK61516.1| DNA mismatch repair protein MutS [Collimonas fungivorans Ter331]
Length = 880
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 275/548 (50%), Gaps = 52/548 (9%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
+G ++ +L +LD CRT G RLL W+ +D RHAA+ L+
Sbjct: 291 RGQDASSGAPTLFSLLDHCRTAMGSRLLRHWLHHAKRDQAVARGRHAAIGALIAADAG-- 348
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL---ISILES-----LVQ 355
+ L +PD++ + RI A +D + +G+ QL L I++ S L+Q
Sbjct: 349 SAISSTLSAVPDIERITARIALLSARPRDLAGLRDGLLQLDSLRADIAMCGSENQAPLLQ 408
Query: 356 NVEASNLNTILSSLQSLKM--------MDRK--------DAVMDKMKEY----------L 389
++ S L T + LQ L+ M R DA +D+++ L
Sbjct: 409 ELQ-SALETPVDCLQLLQTSIAAEPSTMVRDGGVIAPGFDAELDELRGLSENAGQFLVDL 467
Query: 390 ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATA 449
E+ R +A+ ++ N GF +T + D Y T++ R+ L
Sbjct: 468 ETRERARTGIANLRVEY-NKVHGFYIEVTHGQTTKVPDDYRRRQTLKNAERYITPELKAF 526
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAST----CA 505
+ + Q ++++ ++++ A + TL ++ LAQ D LV+ + + C
Sbjct: 527 EDKALSAQERALIREKALYDQILQDLAPHIGTLQNIAHALAQLDTLVALADHAARHDWCV 586
Query: 506 PKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGK 565
P+ P ++ + Q RHP+VE Q +I ND S E L+TGPNMGGK
Sbjct: 587 PRLVNEPAIQ--------IVQGRHPVVEKQI-ERFIANDCQL-SPERKLLLITGPNMGGK 636
Query: 566 STYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATV 625
ST++R + + LA +G +VP DSA + +D+IFTR+GAAD G STFM+EM E+A +
Sbjct: 637 STFMRQVALITLLAYVGSYVPADSAVLGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAI 696
Query: 626 IKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIP 685
+ +ENSLV++DE+GRGTSTFDG +A +IAR L + FTLFATH+ E+ L + P
Sbjct: 697 LNGASENSLVLMDEVGRGTSTFDGLALAWAIARHLIDATRSFTLFATHYFELTQLPDLHP 756
Query: 686 TFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSL 745
+ NV +SA+E +D++V L+ V+ G +SYG+ A++AG P ++ AR + E
Sbjct: 757 SAANVHLSAVEHKDSIVFLHAVQAGPASQSYGLQVAQLAGVPAPVIRAARKHLALLESQS 816
Query: 746 DTKTPSGD 753
TP D
Sbjct: 817 VQPTPQFD 824
>gi|312977892|ref|ZP_07789638.1| DNA mismatch repair protein MutS [Lactobacillus crispatus CTV-05]
gi|310895199|gb|EFQ44267.1| DNA mismatch repair protein MutS [Lactobacillus crispatus CTV-05]
Length = 857
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 296/610 (48%), Gaps = 49/610 (8%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 216 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVAS--AKTGKKMGSLFW 272
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 273 VLDKTHTAMGGRLLKQWLARPLLNMDEINHREEMVQALLDGYFTRENAVD-ALKGVYDLE 331
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------EASNLNTILSSLQS 371
L RI ++ ++ + +P ++ LE ++ + L + + S
Sbjct: 332 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALEQSDSDILVDFAKKIDPLKGVAEMITS 391
Query: 372 LKMMDRK-------------DAVMDKMKEYLESTARRL-NLVADKTIK--LENSPQG--- 412
+ D D +D+ ++ + + + L + AD+ K ++N G
Sbjct: 392 TIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLKVGYNK 451
Query: 413 -FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYETH 463
F Y I + N DRYT T+ R+ L Q ++ EY+
Sbjct: 452 VFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLF 511
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+ + E+V Y L +L LA DV F A+ Y RP V
Sbjct: 512 VK-LREDV----KKYIPALQKLGGQLAALDVYCGF--ATVAEQNNYCRPTFHADNQDINV 564
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
N RHP+VE + SYIPNDV G + L+TGPNM GKSTY+R + + +AQ+G
Sbjct: 565 TN-GRHPVVEKVMTAGSYIPNDVKMDEG-TNIYLITGPNMSGKSTYMRQMALIAIMAQVG 622
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE+GR
Sbjct: 623 SFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVLFDEIGR 682
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + L LFATH+HE+ ++ + +N+ V A E+ L+
Sbjct: 683 GTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTVMDETLDHLKNIHVGATEENGKLI 742
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEY 762
L+++ PG +SYG+H A++AG P ++L +A L+K E P + + E
Sbjct: 743 FLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLKRLEAQGSELAPVSQQLDLFAEPV 802
Query: 763 FKTVQEGEYQ 772
+V+E E Q
Sbjct: 803 ENSVEETETQ 812
>gi|423518406|ref|ZP_17494887.1| DNA mismatch repair protein mutS [Bacillus cereus HuA2-4]
gi|401161133|gb|EJQ68501.1| DNA mismatch repair protein mutS [Bacillus cereus HuA2-4]
Length = 890
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRITMK-LNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKSNLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|326803738|ref|YP_004321556.1| DNA mismatch repair protein MutS [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650969|gb|AEA01152.1| DNA mismatch repair protein MutS [Aerococcus urinae
ACS-120-V-Col10a]
Length = 855
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 194/644 (30%), Positives = 311/644 (48%), Gaps = 77/644 (11%)
Query: 158 NEFSEEDLMQDVNRLVRFDDSELKNARL--LPEMCLTTATH---------CLRSLINYL- 205
+E EEDL Q + +L F S + L LPE T LR L+ Y+
Sbjct: 167 HELREEDLAQ-LEQLFPFTASYINRKTLDQLPETAFEKITQNIKHRIELKALRVLMAYVY 225
Query: 206 ----ELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR 261
++N+ Q + +DY Y+HM +L + + + + SLL LD
Sbjct: 226 STQFRMVNH---WRQAESYELDY--YLHMDYFAKRNLEL--TESIRTQKRSGSLLHFLDE 278
Query: 262 CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAM 321
+T G RLL QW+ +PL I ER V L++ R N+ E L G+ D++ L
Sbjct: 279 TKTAMGGRLLRQWLDRPLIIQATIEERLDQVESLIDAFFERRNIQE-NLSGVYDLERLVA 337
Query: 322 RIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV----EASNLNTILSSLQSLKMMDR 377
+I + ++ ++ + ++P++ L+++ N E N +L+SL +L +
Sbjct: 338 KISMGQVNARELLQLMNSLKKVPQVSENLQAIQDNPSDRQETGVWNKLLNSLAALPEVVE 397
Query: 378 --------------------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
+D D++ +Y ++ +A+ K++K+
Sbjct: 398 TIESAIDPEANISITEGGIIRDGFSDQLDDYRQAIRHGSEWIANLQAKEREATGIKSLKI 457
Query: 407 E-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATAN-----TQYQAIQRE 459
N G+ +T L+ + RY T+ RF L Q +++ E
Sbjct: 458 GYNKVFGYYIEVTKANLHLLPEGRYERKQTLTNAERFITPELKEMEYRILEAQEKSVDLE 517
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
YE V E I + Y + L ++ +AQ DV+ S +A YVRP
Sbjct: 518 YELFLG--VREKIKV---YQKDLQAIAQAVAQVDVIQS--LAEISEQNQYVRPHFSREDR 570
Query: 520 GSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+L+L RHP+VE G ++PND+ + L+TGPNM GKSTY+R +G++V +
Sbjct: 571 -ALLLKDSRHPVVEETLGRDDFVPNDIIMDK-DTCILLITGPNMSGKSTYMRQLGLTVIM 628
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQ+G FVP AT+ + DQIFTR+GA D G STFM+EM E I+ T+ SL++ D
Sbjct: 629 AQMGSFVPASQATLPIFDQIFTRIGATDDLQAGQSTFMVEMMEANQAIQHATDRSLLLFD 688
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
E+GRGTST+DG +A +I L H + LF+TH+HE+ L +P +N+ V A+E++
Sbjct: 689 EIGRGTSTYDGIALAQAILEYLNDHLKAKVLFSTHYHELTDLDNHLPALKNIHVGAIEKD 748
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++V G KSYG+H AK+AG P+ +L A +++ + E
Sbjct: 749 GEVVFLHKVYDGPADKSYGIHVAKLAGLPKSLLANAANILSDLE 792
>gi|375089307|ref|ZP_09735634.1| DNA mismatch repair protein MutS [Facklamia languida CCUG 37842]
gi|374567083|gb|EHR38314.1| DNA mismatch repair protein MutS [Facklamia languida CCUG 37842]
Length = 858
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 270/523 (51%), Gaps = 44/523 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL ++D+ +T G RLL QW+ +PL +++RH V ++++ R+NL E L+ +
Sbjct: 281 SLLWLIDQTQTAMGGRLLHQWLDKPLLRKAPLLDRHRKVKAMIDHYFDRVNLVE-TLKSV 339
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK 373
D++ L +I K ++ ++ + Q+P L L + N E L L + L
Sbjct: 340 YDLERLVTKISLKTVNARELDQLRATLRQIPALNQSLNRM--NQEEDGLFEGLPTFTDL- 396
Query: 374 MMDRKDAVM----------------------DKMKEYLES--------TARRLNLVADKT 403
+DR D V+ D+ ++ L+ AR KT
Sbjct: 397 -LDRIDQVLVEEPPISVAEGRLIKPGYHETLDQYRQALDQGQTWLLDLQARERERTGLKT 455
Query: 404 IKLENSPQGFAYRIT---MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+K+ + + F Y I ++ + DDRY T+ RF + L T+ Q +
Sbjct: 456 LKVGYN-KVFGYYIEVSRIQAKDLEDDRYIRKQTLTNNERFITEELKEIETKILTAQDQA 514
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ + ++ Y Q+L L+ +A+ DVL SF A+ +V+ +
Sbjct: 515 TALEYQLFVDLRDQVNQYGQSLQDLAQRVAELDVLASF--AALSEADQFVQAEIVDQAK- 571
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
+ RHP++E + G ++ NDV + + L+TGPNM GKSTY+R I V L
Sbjct: 572 DWHIEASRHPVLEKVLGSQKFVANDVVIQPDQFVL-LLTGPNMSGKSTYMRQIAFCVILN 630
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
QIGCFVP SA++ +VDQIFTR+GA+D G STFM+EM ET ++ TE SL++ DE
Sbjct: 631 QIGCFVPAKSASLPLVDQIFTRIGASDDLTSGQSTFMVEMVETNYALQHATERSLILFDE 690
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+TFDG +A +I L Q T+F+TH+HE+ L+ + RN+ V A+E+
Sbjct: 691 IGRGTATFDGMALAEAILYHLCQKVQAATIFSTHYHELVDLTDRLDALRNIHVGAIEEYG 750
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LV LY++ G KSYG+H A++AG P+D++ +++++ E E
Sbjct: 751 QLVFLYKILQGPADKSYGLHVARLAGLPDDLINHSQEVLNELE 793
>gi|222153881|ref|YP_002563058.1| DNA mismatch repair protein MutS [Streptococcus uberis 0140J]
gi|254766641|sp|B9DW73.1|MUTS_STRU0 RecName: Full=DNA mismatch repair protein MutS
gi|222114694|emb|CAR43783.1| DNA mismatch repair protein MutS [Streptococcus uberis 0140J]
Length = 847
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/553 (29%), Positives = 273/553 (49%), Gaps = 45/553 (8%)
Query: 223 DYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDL 282
D Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+ +PL
Sbjct: 245 DIKDYLQMSYATKSSLDLI--ENARTKKKHGSLYWLLDETKTAMGMRLLKTWIDRPLISK 302
Query: 283 DAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQ 342
AI ER V + + R +L + +L+G+ D++ L+ R+ K KD ++ +SQ
Sbjct: 303 QAISERQNIVETFLESFIERSDLAD-SLKGVYDIERLSSRVSFGKVNPKDLLQLGHTLSQ 361
Query: 343 LPKLISILESLVQNVEASNLNTILSSLQSLKMMDR--------------------KDAVM 382
+P + ++LE+ + + +L+ +++++ + ++ K
Sbjct: 362 VPYIKAVLEA----INSPHLSKVIATIDPIPELESLIHSAIDPDAPATISEGSIIKTGFD 417
Query: 383 DKMKEYLESTARRLNLVADKTIKLE------------NSPQGFAYRITMKLNNSIDDRYT 430
++ Y + +AD +K N G+ + +T + + D +
Sbjct: 418 QRLDHYRKVMKEGTGWIADIEMKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPDHFF 477
Query: 431 ILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLA 490
T++ R+ LA Q + E + I + Y L L+ +A
Sbjct: 478 RKATLKNSERYGTAELAKIEGQMLEAREESAQLEYDIFMRIREKVETYIDRLQTLAKAIA 537
Query: 491 QFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKS 549
DVL +A YVRP + + RH +VE GV YIPN + F
Sbjct: 538 TVDVLQG--LAYVAEKNHYVRPEFASQKV--ITIQNGRHAVVEKVMGVQEYIPNTIQFNQ 593
Query: 550 GEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQY 609
S L+TGPNM GKSTY+R + ++V +AQ+G +V D A + + D IFTR+GAAD
Sbjct: 594 N-TSIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAADYAKLPIFDAIFTRIGAADDLI 652
Query: 610 RGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTL 669
G STFM+EM E I++ + +SL+I DELGRGT+T+DG +A SI + + TL
Sbjct: 653 SGQSTFMVEMMEANQAIQRASHDSLIIFDELGRGTATYDGMALAQSIIEHIHNRIGAITL 712
Query: 670 FATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPED 729
FATH+HE+ LS + +NV V+ LE++ + L+++ G KSYG+H AK+AG P
Sbjct: 713 FATHYHELTSLSEELGHLKNVHVAILERDGEVTFLHKIAEGPADKSYGIHVAKIAGLPGS 772
Query: 730 MLEQARDLMKEYE 742
+L +A +++K+ E
Sbjct: 773 LLSRADNILKQLE 785
>gi|220932004|ref|YP_002508912.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
gi|254766630|sp|B8CX98.1|MUTS_HALOH RecName: Full=DNA mismatch repair protein MutS
gi|219993314|gb|ACL69917.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
Length = 896
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/536 (30%), Positives = 274/536 (51%), Gaps = 40/536 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ T G RL+ +W+ QPL D + I R AV LVNN + E+ L+G+
Sbjct: 290 SLLNVLDQTITSMGGRLIKKWINQPLIDRNKIETRLDAVEELVNNYLLLQEIREH-LKGI 348
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK 373
D++ + ++ A +D + + +LP++ LE L + N++ L L
Sbjct: 349 YDLERILGKVSYGSANARDLAALKYSILKLPQIKKDLEQLNTKL-FKNMHETFDPLIDLA 407
Query: 374 -MMDR----------------KDAVMDKMKEYLESTARRLNLVAD-----------KTIK 405
++DR KD ++ E ++ + +A+ ++K
Sbjct: 408 GLLDRSIVDEPPVSVREGGLIKDGYSSELDELRKARTEGKDWIANLQKTERERTGISSLK 467
Query: 406 LE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
+ N G+ IT + + D YT T+ RF L + + +
Sbjct: 468 VGFNKVFGYYIEITKANLDRVPDNYTRKQTLSNSERFITPELKEKEALVLGAEEKINDLE 527
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ ++ I + + + + ++++ DVL S +A + Y RP + G ++
Sbjct: 528 YKLFVKIRDIVRDNIKRIKKTAAIISKLDVLTS--LAQNALERDYNRPRINNDGVIEII- 584
Query: 525 NQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RHP+VE G +++PND Y E F ++TGPNM GKSTY+R + + V +AQ+G F
Sbjct: 585 -KGRHPVVEDMGKGAFVPNDTYLDLEEERFIIITGPNMSGKSTYMRQVALIVLMAQMGSF 643
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP D ATI +VD+IFTRVGA+D G STFM+EM E A ++ T NSL+I+DE+GRGT
Sbjct: 644 VPADKATIGIVDRIFTRVGASDDLTTGQSTFMVEMNEVANIVNNATRNSLIILDEVGRGT 703
Query: 645 STFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
ST+DG +A +++ + + + TLFATH+HE+ L P +N V E ED +
Sbjct: 704 STYDGLSIAWAVSEYINNPDRIGARTLFATHYHELTQLENR-PGIKNYNVLVEEDEDGVH 762
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY--SLDTKTPSGDETN 756
L+++ PG +SYG+ A++AG P +++ +A++++ E E TKT G+ N
Sbjct: 763 FLHKIIPGKASESYGIEVAQLAGLPMEIIIRAQEILAELEKKGKESTKTGKGENKN 818
>gi|217964450|ref|YP_002350128.1| DNA mismatch repair protein MutS [Listeria monocytogenes HCC23]
gi|386008175|ref|YP_005926453.1| DNA mismatch repair protein [Listeria monocytogenes L99]
gi|386026776|ref|YP_005947552.1| DNA mismatch repair (recognition) [Listeria monocytogenes M7]
gi|254766631|sp|B8DFS4.1|MUTS_LISMH RecName: Full=DNA mismatch repair protein MutS
gi|217333720|gb|ACK39514.1| DNA mismatch repair protein MutS [Listeria monocytogenes HCC23]
gi|307570985|emb|CAR84164.1| DNA mismatch repair protein [Listeria monocytogenes L99]
gi|336023357|gb|AEH92494.1| DNA mismatch repair (recognition) [Listeria monocytogenes M7]
Length = 860
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 176/606 (29%), Positives = 307/606 (50%), Gaps = 56/606 (9%)
Query: 176 DDSELKNARLLPEMCLTTATHCLRSLINYLELMNNED-NMNQFSIHSIDYSKYVHMSSAV 234
D L+N +L+ + + L++YL+ D Q ++H + S Y+ M
Sbjct: 202 DTIPLENEKLVTRHMSLSEKRAIGKLLHYLKETQKRDLGHLQQAVH-YETSNYMKMDYYS 260
Query: 235 MSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNI 294
+L + Q +LL +LD +T G R+L QW+ +PL D + I+ER V+
Sbjct: 261 KRNLELAESIRGKGRQ--GTLLWLLDNTQTAMGGRMLKQWIDRPLIDRNKIIERQNDVSE 318
Query: 295 LVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL---- 350
L+ N R+ L E L+ + D++ LA R+ +D ++ + Q+P++ + L
Sbjct: 319 LMANFFERLELVE-NLKNVYDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMN 377
Query: 351 --------------ESLVQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRL 396
E L + +E + +++ S++ ++ KD ++ Y +++
Sbjct: 378 SKSLTELANQLDPCEELTEKLEEAIMDSAPISIREGGII--KDGYNSQLDTYRDASRNGK 435
Query: 397 NLVAD-----------KTIKLENSPQGFAYRITMKLNNS---IDDRYTILDTVRGGVRFQ 442
+A+ KT+K+ + F Y I + N+ + RY T+ R+
Sbjct: 436 TWIAELERKERELTGIKTMKV-GFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYI 494
Query: 443 DDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
L + + ++++ EY+ + EV + Y + L +L+ +++ D L S
Sbjct: 495 TPELKEKEKLILDAEEKSMELEYQ-----LFTEVRELVKDYIERLQKLAKSVSEIDCLQS 549
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNL 556
F A ++RP + GSL + Q RHP+VE + G SY+ ND L
Sbjct: 550 F--ADISEKNHFIRPTLSE--DGSLHVKQGRHPVVEKVMGAQSYVANDCDLDRNR-EILL 604
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + ++ AQ+GCFVP + AT+ + DQIFTR+GAAD G STFM
Sbjct: 605 ITGPNMSGKSTYMRQVALTAICAQVGCFVPAEEATLPIFDQIFTRIGAADDLIAGQSTFM 664
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM E I T++SL++ DE+GRGT+T+DG +A +I + + TLF+TH+HE
Sbjct: 665 VEMLEARNAIVHATKDSLILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHE 724
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ L + + +N+ VSA+E+ +V L+++K G KSYG+H A++A P+ ++E+A
Sbjct: 725 LTDLEKELHGLQNIHVSAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASR 784
Query: 737 LMKEYE 742
++++ E
Sbjct: 785 ILEQLE 790
>gi|228909593|ref|ZP_04073416.1| DNA mismatch repair protein mutS [Bacillus thuringiensis IBL 200]
gi|228849882|gb|EEM94713.1| DNA mismatch repair protein mutS [Bacillus thuringiensis IBL 200]
Length = 886
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|229031399|ref|ZP_04187400.1| DNA mismatch repair protein mutS [Bacillus cereus AH1271]
gi|228729894|gb|EEL80873.1| DNA mismatch repair protein mutS [Bacillus cereus AH1271]
Length = 886
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLTQLEGQEEIIIPKRVEVKA 799
Query: 758 REEE 761
+E+E
Sbjct: 800 QEQE 803
>gi|402558903|ref|YP_006601627.1| DNA mismatch repair protein MutS [Bacillus thuringiensis HD-771]
gi|423359245|ref|ZP_17336748.1| DNA mismatch repair protein mutS [Bacillus cereus VD022]
gi|401085117|gb|EJP93363.1| DNA mismatch repair protein mutS [Bacillus cereus VD022]
gi|401787555|gb|AFQ13594.1| DNA mismatch repair protein MutS [Bacillus thuringiensis HD-771]
Length = 892
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|257088271|ref|ZP_05582632.1| MutS 1 protein [Enterococcus faecalis D6]
gi|422723501|ref|ZP_16780036.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX2137]
gi|256996301|gb|EEU83603.1| MutS 1 protein [Enterococcus faecalis D6]
gi|315026534|gb|EFT38466.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX2137]
Length = 858
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 273/535 (51%), Gaps = 47/535 (8%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
Q + Q +LL +LD +T G RLL QW+ +PL I ER V L+N R+
Sbjct: 269 QSIRTGQKKGTLLWLLDETKTAMGGRLLKQWLDRPLIQERQIKERQEMVQSLLNAYFERL 328
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+L + AL + D++ LA R+ +D ++ + Q+P + ++ + Q E +L
Sbjct: 329 DL-QAALTNVYDLERLAGRVAFGSVNGRDLIQLRTSLEQVPTIRQLIVGINQG-EWDDLL 386
Query: 364 TILSSLQSLKMMDR-----------------KDAVMDKMKEYLESTARRLNLVADKTIK- 405
L+ ++ L + KD D++ EY ++ +A+ K
Sbjct: 387 VDLNPVEDLVALIATAINEEAPLQITEGNVIKDGYNDQLDEYRDAMRNGKQWLAELEAKE 446
Query: 406 -----LENSPQG----FAYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLA-----T 448
++N G F Y I + L N + +Y T+ RF L
Sbjct: 447 RQETGIKNLKIGYNRVFGYFIEITKSNLANLEEGKYERKQTLANAERFITPELKELERLI 506
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+ ++++ EY+ V E + + QTL + ++ DVL SF A+
Sbjct: 507 LEAEEKSVELEYQLFLA--VREQVKTNIDRLQTL---AKTISAVDVLQSF--ATISERYQ 559
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
YVRP ++ T +L + + RHP+VE + G YIPN + E L+TGPNM GKST
Sbjct: 560 YVRPTLRS-NTKNLAIVEGRHPVVEKVLGHQEYIPNSIRMNP-ETDILLITGPNMSGKST 617
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
Y+R + ++V +AQIGCFVP +SA + + DQIFTR+GA+D G STFM+EM E ++
Sbjct: 618 YMRQLALTVVMAQIGCFVPAESAEMPIFDQIFTRIGASDDLIAGQSTFMVEMMEANQALR 677
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
T NSL++ DELGRGT+T+DG +A +I + Q TLF+TH+HE+ +L +
Sbjct: 678 HATPNSLILFDELGRGTATYDGMALAQAIIEYIHREVQAKTLFSTHYHELTVLDETLKGL 737
Query: 688 RNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+N+ V A+E++ +V L+++ G KSYG+H AK+AG P +LE+A ++ E
Sbjct: 738 KNIHVGAVEKDGEVVFLHKMMEGPADKSYGIHVAKIAGLPSPLLERAATILSALE 792
>gi|293381577|ref|ZP_06627564.1| DNA mismatch repair protein MutS [Lactobacillus crispatus 214-1]
gi|290921847|gb|EFD98862.1| DNA mismatch repair protein MutS [Lactobacillus crispatus 214-1]
Length = 865
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 296/610 (48%), Gaps = 49/610 (8%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 224 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVAS--AKTGKKMGSLFW 280
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 281 VLDKTHTAMGGRLLKQWLARPLLNMDEINHREEMVQALLDGYFTRENAVD-ALKGVYDLE 339
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------EASNLNTILSSLQS 371
L RI ++ ++ + +P ++ LE ++ + L + + S
Sbjct: 340 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALEQSDSDILVDFAKKIDPLKGVAEMITS 399
Query: 372 LKMMDRK-------------DAVMDKMKEYLESTARRL-NLVADKTIK--LENSPQG--- 412
+ D D +D+ ++ + + + L + AD+ K ++N G
Sbjct: 400 TIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLKVGYNK 459
Query: 413 -FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYETH 463
F Y I + N DRYT T+ R+ L Q ++ EY+
Sbjct: 460 VFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLF 519
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+ + E+V Y L +L LA DV F A+ Y RP V
Sbjct: 520 VK-LREDV----KKYIPALQKLGGQLAALDVYCGF--ATVAEQNNYCRPTFHADNQDINV 572
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
N RHP+VE + SYIPNDV G + L+TGPNM GKSTY+R + + +AQ+G
Sbjct: 573 TN-GRHPVVEKVMTAGSYIPNDVKMDEG-TNIYLITGPNMSGKSTYMRQMALIAIMAQVG 630
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE+GR
Sbjct: 631 SFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVLFDEIGR 690
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + L LFATH+HE+ ++ + +N+ V A E+ L+
Sbjct: 691 GTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTVMDETLDHLKNIHVGATEENGKLI 750
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEY 762
L+++ PG +SYG+H A++AG P ++L +A L+K E P + + E
Sbjct: 751 FLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLKRLEAQGSELAPVSQQLDLFAEPV 810
Query: 763 FKTVQEGEYQ 772
+V+E E Q
Sbjct: 811 ENSVEETETQ 820
>gi|256844548|ref|ZP_05550034.1| DNA mismatch repair protein MutS [Lactobacillus crispatus
125-2-CHN]
gi|256849063|ref|ZP_05554496.1| DNA mismatch repair protein mutS [Lactobacillus crispatus MV-1A-US]
gi|262047545|ref|ZP_06020500.1| DNA mismatch repair protein MutS [Lactobacillus crispatus MV-3A-US]
gi|256613626|gb|EEU18829.1| DNA mismatch repair protein MutS [Lactobacillus crispatus
125-2-CHN]
gi|256713839|gb|EEU28827.1| DNA mismatch repair protein mutS [Lactobacillus crispatus MV-1A-US]
gi|260572121|gb|EEX28686.1| DNA mismatch repair protein MutS [Lactobacillus crispatus MV-3A-US]
Length = 857
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 295/610 (48%), Gaps = 49/610 (8%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 216 RQLVGYL-LSTQRRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVAS--AKTGKKMGSLFW 272
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 273 VLDKTHTAMGGRLLKQWLARPLLNMDEINHREEMVQALLDGYFTRENAVD-ALKGVYDLE 331
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------EASNLNTILSSLQS 371
L RI ++ ++ + +P ++ LE ++ + L + + S
Sbjct: 332 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALEQSDSDILVDFAKKIDPLKGVAEMITS 391
Query: 372 LKMMDRK-------------DAVMDKMKEYLESTARRL-NLVADKTIK--LENSPQG--- 412
+ D D +D+ ++ + + + L + AD+ K ++N G
Sbjct: 392 TIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLKVGYNK 451
Query: 413 -FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYETH 463
F Y I + N DRYT T+ R+ L Q ++ EY+
Sbjct: 452 VFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLF 511
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+ + E+V Y L +L LA DV F A+ Y RP V
Sbjct: 512 VK-LREDV----KKYIPALQKLGGQLAALDVYCGF--ATVAEQNNYCRPTFHADNQDINV 564
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
N RHP+VE + SYIPNDV G + L+TGPNM GKSTY+R + + +AQ+G
Sbjct: 565 TN-GRHPVVEKVMTAGSYIPNDVKMDEG-TNIYLITGPNMSGKSTYMRQMALIAIMAQVG 622
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE+GR
Sbjct: 623 SFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVLFDEIGR 682
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + L LFATH+HE+ ++ + +N+ V A E+ L+
Sbjct: 683 GTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTVMDETLDHLKNIHVGATEENGKLI 742
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEY 762
L+++ PG +SYG+H A++AG P ++L +A L+K E P + + E
Sbjct: 743 FLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLKRLEAQGSELAPVSQQLDLFAEPV 802
Query: 763 FKTVQEGEYQ 772
+V+E E Q
Sbjct: 803 ENSVEETETQ 812
>gi|339448738|ref|ZP_08652294.1| DNA mismatch repair protein MutS [Lactobacillus fructivorans KCTC
3543]
Length = 885
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 271/519 (52%), Gaps = 36/519 (6%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL I+D +T G R L QW+++PL D I +R + V L++N R L + ++ +
Sbjct: 279 TLLWIVDDTKTAMGGRKLKQWLERPLIDRKEIEQRQSLVETLLDNYYERSELADNLIK-V 337
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL--------VQNVEASN---- 361
D++ LA RI +D ++ + Q+PK+ +L L Q ++ N
Sbjct: 338 YDLERLAGRISFGGVNGRDLVQLETSLEQIPKIKHVLNDLDTPEFDEIYQKLDDVNDVYE 397
Query: 362 -LNTILSSLQSLKMMDR---KDAVMDKMKEYLESTARRLNLVADKTIK------LENSPQ 411
+ + S + + D +D +++ +Y ++ +AD K + N
Sbjct: 398 LIKAAIISEPPISVTDGGLIRDGYSEQLDQYRDAMKNGKQWLADMEAKERQITGIHNLKI 457
Query: 412 G----FAYRITMKLNN--SIDD-RYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
G F Y I + N +DD RY L T+ RF L + + + ++ +
Sbjct: 458 GYNRVFGYYIEVSKGNLSKLDDSRYERLQTLTNAERFSTPELKEKESIILEAEEKSKSLE 517
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
I V + +L+ +++ DVL SF A+ +++P L +
Sbjct: 518 YEIFTRVRDQIKKQIPRIQKLASGISRLDVLQSF--ATISEKYQFIKPQFN--DGHDLNV 573
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP+VE + G SY+PNDV VS L+TGPNM GKSTY+R + + V LAQ+GC
Sbjct: 574 KAGRHPVVERVMGAQSYVPNDVVMHPS-VSELLITGPNMSGKSTYMRQLALIVILAQMGC 632
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVP +SA + + DQIFTR+GAAD G STFM+EM+E +K T+NSL++ DE+GRG
Sbjct: 633 FVPAESADMPIFDQIFTRIGAADDLISGKSTFMVEMREANEALKHATDNSLILFDEIGRG 692
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
TST+DG +A +I + + TLF+TH+HE+ L + +NV V A+E+ NLV
Sbjct: 693 TSTYDGMALAQAIIEYIHDNIGAKTLFSTHYHELTDLDHELKHLKNVHVGAVEKNGNLVF 752
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+++ G +SYG++ AK+AG P+ +L++A ++++ E
Sbjct: 753 LHKIMNGPADRSYGINVAKLAGLPDQLLKRANTVLEKLE 791
>gi|373456284|ref|ZP_09548051.1| DNA mismatch repair protein mutS [Caldithrix abyssi DSM 13497]
gi|371717948|gb|EHO39719.1| DNA mismatch repair protein mutS [Caldithrix abyssi DSM 13497]
Length = 884
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 194/695 (27%), Positives = 341/695 (49%), Gaps = 71/695 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A+ D+ T F + E P NL +++ P+E L+ A L+ + I L+
Sbjct: 146 GIAVADVSTGSFLVAEFP----AQNLLEQLIRYQPREILVAASRLDALQTLIANHLN--- 198
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ ++++ + + M ++ L F LK + A + I+YL+ N
Sbjct: 199 -ALLTKREDWLFDRNYMYEL-LLQHFKTHSLKGFGVEDMQAGIIAAGVV---IHYLQ-EN 252
Query: 210 NEDNMNQF-SIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ + F + ++ S+Y+ + + +L + + + ++LL +D TP G
Sbjct: 253 YKTRLEHFIHLQRVNLSRYMVLDESTRRNLEI--SESISGGGVRNTLLHFIDFTITPMGA 310
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RL QW++QPL D++ I R V+ LV + R L L+ + D + L +I +A
Sbjct: 311 RLFKQWIQQPLLDMEEINHRLDIVSELVGDAPLREQLAA-ELKQIFDTERLLGKIVTNRA 369
Query: 329 GLKDCYRVYEGVSQLPKL------------------ISILESLVQNVEASNLNTILSSLQ 370
+D + + + Q+ + IL+SL + ++ + + +LQ
Sbjct: 370 NARDVLNLGQSLKQIVPIKAIIDQTTCDTLKAHFQSFQILDSLTEKIDRAIVENPPITLQ 429
Query: 371 SLKM--------MDRKDAVMDKMKEYLESTARR-LNLVADKTIKLE-NSPQGFAYRITMK 420
+ +D A+ ++ K++L + +R T+K+ N G+ +T
Sbjct: 430 EGGIIRAGYHAELDELRAISEQGKDWLLAYQQRERERTGISTLKVNYNKVFGYYIEVTNV 489
Query: 421 LNNSIDDRYTILDTVRGGVRF-------QDDRLATANTQYQAIQREYETHQQSIVEEVIG 473
+ I Y T+ RF +D++ A + + EY Q+ I EEV
Sbjct: 490 HKDKIPPEYVRKQTLVNAERFITQELKEWEDKILGAEEKINEL--EYRLFQE-IREEV-- 544
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE 533
Y + + S ++A+ D +S +A YVRP + + +L + + RHP+VE
Sbjct: 545 --GRYVEPIQLNSRLIAELDCFLS--LAQAAIENNYVRPEID--DSRALEIREGRHPVVE 598
Query: 534 --LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSAT 591
L G +I ND Y ++TGPNM GKST++R +G+ V +AQIG +VP A
Sbjct: 599 KTLPPGEDFIANDAYLDPDSEQIWIITGPNMAGKSTFLRQVGLIVLMAQIGSYVPAAKAR 658
Query: 592 ISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFG 651
I +VD+IFTRVGA+D+ G STF++EM ETA ++ T SL+++DE+GRGTSTFDG
Sbjct: 659 IGIVDRIFTRVGASDNLASGESTFLVEMNETANILNNATPRSLILLDEIGRGTSTFDGLS 718
Query: 652 MACSIARELASHRQPF----TLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
+A ++A + +R+P TLFATH+HE+ L+ + P +N V+ E +D ++ L ++
Sbjct: 719 IAWAVAEYI--YREPRLRCKTLFATHYHELTELALLYPRIKNYNVAVEEWKDQVIFLRKI 776
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
PG SYG++ A+MAG P ++ +A++++ E
Sbjct: 777 VPGGSDNSYGIYVAQMAGLPAPLIARAKEILTNLE 811
>gi|218898869|ref|YP_002447280.1| DNA mismatch repair protein MutS [Bacillus cereus G9842]
gi|226723051|sp|B7ITM1.1|MUTS_BACC2 RecName: Full=DNA mismatch repair protein MutS
gi|218542997|gb|ACK95391.1| DNA mismatch repair protein MutS [Bacillus cereus G9842]
Length = 892
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 280/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKV 805
Query: 758 REEE 761
+E+E
Sbjct: 806 QEQE 809
>gi|423561823|ref|ZP_17538099.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-A1]
gi|401202080|gb|EJR08945.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-A1]
Length = 892
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 280/545 (51%), Gaps = 50/545 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LENSPQGFAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQ 457
+ + F Y I + N + RY T+ RF D L T + + +Q
Sbjct: 456 I-GYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQ 514
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 515 LEYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT- 566
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 -KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVT 624
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 625 VMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLIL 684
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E
Sbjct: 685 FDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIE 744
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETN 756
+ +V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 745 ENGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVK 804
Query: 757 NREEE 761
+E+E
Sbjct: 805 VQEQE 809
>gi|423635458|ref|ZP_17611111.1| DNA mismatch repair protein mutS [Bacillus cereus VD156]
gi|401278209|gb|EJR84145.1| DNA mismatch repair protein mutS [Bacillus cereus VD156]
Length = 890
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|420160966|ref|ZP_14667737.1| DNA mismatch repair protein [Weissella koreensis KCTC 3621]
gi|394745716|gb|EJF34534.1| DNA mismatch repair protein [Weissella koreensis KCTC 3621]
Length = 857
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 277/539 (51%), Gaps = 48/539 (8%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
+ Q +LL +LD +T G RLL QW++QPL D ++ R+ + + N +L +
Sbjct: 271 TQQRSGTLLWLLDETKTAMGGRLLKQWIEQPLIDQQNLMSRYDKIEQFMQNFLIENDL-Q 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-- 365
AL+ + D++ L R+ A +D ++ + Q+P ++ +LE L V ++ I
Sbjct: 330 SALKSVYDLERLVGRVAYGSANGRDLLQIRNSLRQIPTILELLEDLDPAVFGGLISQIDP 389
Query: 366 ---LSSLQSLKMM------------------DRKDAVMDKM---KEYL---ESTARRLNL 398
L +L S ++ D+ DA D M K++L E+T R
Sbjct: 390 VTDLEALISTAIIEDPPLSVTDGGLIKAGYNDQLDAYQDVMHNGKQWLAELEATEREATG 449
Query: 399 VADKTIKLENSPQGFAYRITMKLNNSIDD-RYTILDTVRGGVRF-----QDDRLATANTQ 452
+ I N G+ +T + +DD RYT T+ RF ++ +
Sbjct: 450 INSLKIGF-NKVFGYYIEVTRANIDKLDDNRYTRKQTLVNAERFITPELKEHEQKILEAE 508
Query: 453 YQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
++ Q EY+ Q V E I ++ + L +L+ +A DVL S +A + RP
Sbjct: 509 EKSSQLEYQLFTQ--VREQIKLN---IKRLQRLAKQIATLDVLTS--LADVAQKNQFTRP 561
Query: 513 CMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRS 571
+ +V RHP+VE + G SY+ ND+ + L+TGPNM GKSTY+R
Sbjct: 562 RLNQKQHLEIV--GGRHPVVEKVLGHQSYVANDIMMDQNQ-EIMLITGPNMSGKSTYMRQ 618
Query: 572 IGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTE 631
+ ++V +AQIG FVP SA + + DQIFTR+GAAD G STFM+EM E T ++ T+
Sbjct: 619 LALTVIMAQIGSFVPAQSADLPIFDQIFTRIGAADDLISGNSTFMVEMSEANTALQNATK 678
Query: 632 NSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQ 691
NSL++ DELGRGT+TFDG +A +I + + TLF+TH+HE+ L + +P NV
Sbjct: 679 NSLILFDELGRGTATFDGMALAQAIIEHIHQNVHAKTLFSTHYHELTSLDQELPQLFNVH 738
Query: 692 VSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
V A E+ L+ ++V G +SYG++ AK+AG P+ ++E+A ++ + E T+ P
Sbjct: 739 VGAHEENGELIFSHKVLAGPADQSYGINVAKLAGLPQTLIERATVILNQLETPEQTEIP 797
>gi|309807428|ref|ZP_07701391.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
01V1-a]
gi|308169350|gb|EFO71405.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
01V1-a]
Length = 854
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 296/576 (51%), Gaps = 59/576 (10%)
Query: 220 HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPL 279
S + ++Y+ MS V ++L ++ + + + + SL +LD+ T G RLL W+++PL
Sbjct: 245 QSYEPNQYLQMSHIVQTNLELI--KSAKTGKKMGSLFWLLDKTSTAMGGRLLKSWIERPL 302
Query: 280 KDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEG 339
L I R V L ++ +R + + L+G+ D++ L R+ A ++ ++ +
Sbjct: 303 ISLSEIKSRQLVVTALFDDYFSREKIIK-QLQGVYDLERLTGRVALGSANARELLQLADS 361
Query: 340 VSQLPKLISILESLVQNVEASNLNTILSSLQSLK-------------------------- 373
++ +P++I+IL N + LN + LK
Sbjct: 362 LAVVPEIINILA----NSKNEVLNNFAQKIDPLKGIHDLIVKTIVENPPLSTKEGGIIKA 417
Query: 374 ----MMDR-KDAVMDKMKEYLESTARRLNLVADKTIKLENSPQG----FAYRITMKLNNS 424
+DR +DA+M+ K++L A N +KT + N G F Y I ++ NS
Sbjct: 418 GVSSQLDRYRDAMMNG-KKWLADMA---NSEREKT-GINNLRVGYNKVFGYYI--EVTNS 470
Query: 425 IDDRYTILDTVRGGVRFQDDRLATAN-TQYQAIQREYETHQQSIVEEVIG----ISAGYT 479
D+ + +R +R T +++A+ E + + + E+ Y
Sbjct: 471 YKDKVPLDRYMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFTNLREDIKKYI 530
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
L +L+ L+ DVL +FS+ S YV P + ++N RHP+VE +
Sbjct: 531 PALQKLAKQLSSLDVLATFSLLS--EQNNYVCPQFSQDSSAINIVN-GRHPVVEKVMSDE 587
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPNDV + + L+TGPNM GKSTY+R + + + +AQIGCF+P DSA + + D+I
Sbjct: 588 EYIPNDVKMDE-QTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFDKI 646
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GA D G STFM+EM E T +K T+ SL++ DE+GRGT+T+DG +A +I +
Sbjct: 647 FTRIGAGDDLISGKSTFMVEMSEANTALKNATKRSLILFDEIGRGTATYDGMALAGAIIK 706
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
L TLFATH+HE+ L + + +N+ V A ++ +L+ L+++ PG+ +SYG+
Sbjct: 707 YLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGHLIFLHKILPGAADQSYGI 766
Query: 719 HCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDE 754
H A++AG P +L +A ++K+ E + D + DE
Sbjct: 767 HVAQLAGLPTKVLREATHMLKQLEKNSDNQVAFSDE 802
>gi|303232158|ref|ZP_07318861.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-049-V-Sch6]
gi|302513264|gb|EFL55303.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-049-V-Sch6]
Length = 873
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/534 (30%), Positives = 274/534 (51%), Gaps = 39/534 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LDR TP G RLL QW++ PL D+ I R AAV L++ R + Y L +
Sbjct: 288 TLLDVLDRTLTPMGARLLKQWLESPLTDISTIQRRQAAVAELISRNGERCEIQSY-LDCI 346
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ------NVEASN------ 361
D + + RI +D + E + LP + ++L+ N N
Sbjct: 347 YDFERIVGRIETGSVSPRDFTSLRESLQVLPHIKNLLKEFSGLSLSSINNRIDNHADIYD 406
Query: 362 -LNTILSSLQSLKMMDRK------DAVMDKMKEYLESTARRLNLVADKT-----IKLE-- 407
LN ++ +L + D + + +D+++ ++ L + DK +KL+
Sbjct: 407 LLNRAIAEQPALTLKDGRVIRDGYNEELDELRSLATNSEVWLQKLEDKAREETGLKLKTK 466
Query: 408 -NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQS 466
N G+ + ++ + + + T R+ L + + + + + +Q
Sbjct: 467 YNKVFGYFFEVSKSQIDKVPAYFIRKQTTVNAERYITPDLKEFEIKILSAKEKIVSLEQQ 526
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQ 526
+ +++ G + + + + LA+ DVL S +A+ Y+ C + G + +
Sbjct: 527 LYQDLRNQIKGVIKKVQETARALAELDVLAS--LATVAYESNYI--CPNIVMNGQINIRD 582
Query: 527 CRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
RHP++E L+ V ++PNDV + F L+TGPNM GKSTY+R + + + +AQIG F
Sbjct: 583 GRHPVIEKFLKREV-FVPNDVVLNHDDEEFMLITGPNMAGKSTYMRQVAILMIMAQIGSF 641
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
+P ATIS VD++FTRVGA+D G STFM+EMKE A +++ T SL+I+DE+GRGT
Sbjct: 642 IPAREATISPVDRVFTRVGASDDISTGQSTFMVEMKEVAYILENATSKSLIILDEIGRGT 701
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
STFDG +A ++ + H TLFATH+HE+ L V P +N V+ E+ ++ L
Sbjct: 702 STFDGLSIAQAVVEHICKHIHAKTLFATHYHELIPLEDVYPRLKNYTVAVKEKGKDIAFL 761
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNR 758
++ G +SYG+H AK+AG P +L++A +++ SL+ + D+ NNR
Sbjct: 762 RRIIRGGADRSYGIHVAKLAGLPAQVLKRAEVILE----SLEEQNTDTDDLNNR 811
>gi|256852232|ref|ZP_05557618.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 27-2-CHN]
gi|260661736|ref|ZP_05862647.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 115-3-CHN]
gi|256615278|gb|EEU20469.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 27-2-CHN]
gi|260547483|gb|EEX23462.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 115-3-CHN]
Length = 854
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 179/586 (30%), Positives = 293/586 (50%), Gaps = 57/586 (9%)
Query: 197 CLRSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSL 255
+ L+ YL L+ + ++ I S + S+Y+ MS V ++L ++ + + + SL
Sbjct: 215 ATKQLVIYL-LVTQKRSLAHLQIAKSYEVSQYLQMSHVVQNNLELVA--SAKTGKKMGSL 271
Query: 256 LGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPD 315
+LD+ T G RLL QW+ +PL + I +R V +++N R + + AL+G+ D
Sbjct: 272 FWLLDKTNTAMGGRLLKQWLARPLLSISEIEKRQKIVQAMLDNYFTREGVKD-ALKGVYD 330
Query: 316 MQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL-----ESLV----QNVEASNL---- 362
++ L RI A ++ ++ + +P++ S L E L Q ++ S L
Sbjct: 331 LERLTGRIAFGSANARELLQLSRSLDAIPQIQSALFESGDEDLANFAEQIIDLSELAKKI 390
Query: 363 -NTILSSLQSL------------KMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENS 409
+TI+ + L + +DR M+ K +L +L K +EN
Sbjct: 391 KDTIVENPPILTTDGGLIREGINEQLDRYRDAMNNGKTWLA----QLQAQERKATGIENL 446
Query: 410 PQG----FAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
G F Y I + N + RY T+ G R+ L +++ + E E
Sbjct: 447 KIGYNKVFGYFIQVSKGNVAKVPEGRYIRKQTLTGSERYITPEL----KEHENLILEAEN 502
Query: 463 HQQSIVEEVIGISAGYTQT----LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ ++ Y +T L +L + +A D L SF A+ Y RP
Sbjct: 503 KSTDLEYQIFSDLREYIKTFIPKLQELGNAIASLDALTSF--ATVAEENNYCRPSFH-QD 559
Query: 519 TGSLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
+ + + RHP+VE L G SYIPND+ + + S L+TGPNM GKSTY+R + +
Sbjct: 560 SQEIKVVAGRHPVVEKVLADG-SYIPNDIQM-ADDTSVFLITGPNMSGKSTYMRQMALIA 617
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+G FVP A + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+
Sbjct: 618 VMAQVGSFVPATEAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQNATKRSLVL 677
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGT+T+DG +A +I + L TLFATH+HE+ + + + +N+ V A +
Sbjct: 678 FDEIGRGTATYDGMALAGAIVKYLHDKVGAKTLFATHYHELTDMEKTLDHLKNIHVGATQ 737
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ NL+ L+++ PG +SYG+H A++AG P +L +A ++K E
Sbjct: 738 ENGNLIFLHKILPGPADQSYGIHVAQLAGLPNKVLREASKMLKRLE 783
>gi|229134577|ref|ZP_04263387.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST196]
gi|228648838|gb|EEL04863.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST196]
Length = 884
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 784
>gi|423511802|ref|ZP_17488333.1| DNA mismatch repair protein mutS [Bacillus cereus HuA2-1]
gi|402450063|gb|EJV81897.1| DNA mismatch repair protein mutS [Bacillus cereus HuA2-1]
Length = 890
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|423669345|ref|ZP_17644374.1| DNA mismatch repair protein mutS [Bacillus cereus VDM034]
gi|423674527|ref|ZP_17649466.1| DNA mismatch repair protein mutS [Bacillus cereus VDM062]
gi|401298472|gb|EJS04072.1| DNA mismatch repair protein mutS [Bacillus cereus VDM034]
gi|401310078|gb|EJS15411.1| DNA mismatch repair protein mutS [Bacillus cereus VDM062]
Length = 890
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|451982372|ref|ZP_21930688.1| DNA mismatch repair protein mutS [Nitrospina gracilis 3/211]
gi|451760378|emb|CCQ91973.1| DNA mismatch repair protein mutS [Nitrospina gracilis 3/211]
Length = 882
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 195/687 (28%), Positives = 322/687 (46%), Gaps = 48/687 (6%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A +D+ T F + E+P + L+ + + PKE L+P N N
Sbjct: 148 GLAALDMSTGLFKVTELPPS-AENLLQDELAKLDPKEILIPENTANGN--------GAGP 198
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMC--LTTATHCLRSLINYLEL 207
++G ED M ++ R + K L C A +L+ YL+
Sbjct: 199 PALSGTGYFIQPVEDWMFHHSQAHRILVEQFKTKTLDGFGCEAWPAAVSAAGALVQYLKE 258
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ S+ + + + + ++SL ++ S+ Q SLLG LD TP G
Sbjct: 259 TQKSALQHITSLSTFSTQDSMMLDQSTINSLELV---QSSDGQRKHSLLGHLDATCTPLG 315
Query: 268 HRLLAQWMKQPLKDLDAIVER-----HAAVNILVNNTEARMNLHEYALRGLPDMQSLAMR 322
R L +W+ +PL L+AI +R H ++L N H + L L S+A
Sbjct: 316 ARRLREWILKPLIRLEAIEQRLDLVGHYREHLLERNDLRERLKHIFDLERLLGKISMATC 375
Query: 323 IGRKKAGLKDCYRVYEGVSQ------LPKLISI------LESLVQNVEASNLNTILSSLQ 370
R LK+ R + + LP + +I L++L Q ++ + +++
Sbjct: 376 TPRDLIALKNSLRALPEIQEMIGRCPLPAMSAIRDGWDNLDNLYQGIDEQIEDDPPLNIK 435
Query: 371 SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIKLENSPQ---------GFAYRITMK 420
++ D +D++K ++ + + + + + + PQ G+ +T K
Sbjct: 436 DGGLIKPGCDQELDRLKSIMKDSNQAIANLEAREKERTGIPQLKVGYNKIYGYYLEVTKK 495
Query: 421 LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQ 480
+ + D Y ++ RF L ++ + + + +Q + EV A
Sbjct: 496 NLDRVPDDYIRKQSLVNAERFISPELKQYESEITGAEEKVQIIEQRLFHEVRQSVAAEGA 555
Query: 481 TLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVEL-QGGVS 539
+ ++ + + D L+ F A + Y RP M +L + RHP+VEL
Sbjct: 556 RIQAMAKRIGELDALLGF--AQIAHQQNYCRPQMD--DGDALRIQNGRHPLVELIDPNQP 611
Query: 540 YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIF 599
+IPND + E ++TGPNM GKSTY+R + + V +AQIGCFVP + A I +VD+IF
Sbjct: 612 FIPNDTHLDCDEHQVAIITGPNMAGKSTYLRQVALIVLMAQIGCFVPAEEAEIGLVDRIF 671
Query: 600 TRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARE 659
+RVGA D +G STFM+EM ETA ++ T SL+++DE+GRGTSTFDG +A +I
Sbjct: 672 SRVGAQDHLQKGQSTFMVEMNETANILNNATRRSLIVLDEIGRGTSTFDGISIAWAIVEF 731
Query: 660 L--ASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYG 717
L H TLFATH+HE+ L R+ + +N V E D ++ L ++ PG KSYG
Sbjct: 732 LQGPGHIGAKTLFATHYHELTELERLFHSVKNYNVQIKEWNDQIIFLRKIVPGGADKSYG 791
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYEYS 744
+H A++AG PE +L++A +++ E S
Sbjct: 792 IHVARLAGLPEQVLQRANEVLFNLENS 818
>gi|379795662|ref|YP_005325660.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356872652|emb|CCE58991.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 834
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 179/579 (30%), Positives = 293/579 (50%), Gaps = 58/579 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 212 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 263
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 264 PLINKQQIESRLDIVDEFSKHFIERDTLRNY-LNQVYDIERLVGRVSYGNVNARDLIQLK 322
Query: 338 EGVSQLPKLISILESLVQ-NVEASN----LNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ Q +E N L+ +L L+ + + +V D
Sbjct: 323 HSISEIPNIKALLNSMNQETIEQVNQLEPLDDLLEVLEQSLVEEPPISVKDGGLFKVGFN 382
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 383 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSNF 442
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 443 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 497
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T +L+ + RHP+VE + Y+
Sbjct: 498 QQQAKIISELDCLQSF--AEIAQKYNYTRPTFSDNKTLNLI--ESRHPVVERVMDYNDYV 553
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PND E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 554 PNDCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCQEAVLPIFDQIFTR 612
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 613 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 672
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 673 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 732
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREE 760
K+A PE ++ +A+ ++ ++E + K + + T N +E
Sbjct: 733 KLADLPEKVINRAQVILNDFEETAGKKQINPEITKNADE 771
>gi|260891463|ref|ZP_05902726.1| DNA mismatch repair protein MutS [Leptotrichia hofstadii F0254]
gi|260858846|gb|EEX73346.1| DNA mismatch repair protein MutS [Leptotrichia hofstadii F0254]
Length = 894
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 192/693 (27%), Positives = 327/693 (47%), Gaps = 62/693 (8%)
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTI 144
+ N +G+A +D+ T +F + E+ DD + L I + PKE L+ ++ + K K+
Sbjct: 132 IENKLGIAYIDITTGEFKVTEVEKDDDFVKLFNEINKIEPKEVLVTEDFYGEIKEKLDDF 191
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
L +N +T K S + LM D +V + +K+ + + +
Sbjct: 192 LQKNDSVVTFVNKVRDSAKYLM-DYFEIVSLESYGIKDKKGIIGAAAMALDYAAT----- 245
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRT 264
M E + I ++ S Y +++ +L +L Q + Y SLL +LD C+T
Sbjct: 246 ---MQVEHELTVEKIEFVNISNYAEINAITSRNLELLKNQREKT--IYGSLLWVLDECKT 300
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI- 323
G RLL +++ PL ++D I +R V ++N R +L E L + D++ L +I
Sbjct: 301 SMGTRLLKRFINNPLLNVDKIRKRQEDVQYFIDNILIREDLRE-KLENIYDLERLLGKII 359
Query: 324 -----GRKKAGLK----------------------------DCYRVYEGVSQLPKLISIL 350
G+ LK +CY++ + S+
Sbjct: 360 FGSENGKDLTALKKTIKSAVEIMKILGNTDFFKDIDANILFECYKIIDDSINEDAPFSVR 419
Query: 351 ESLVQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSP 410
E + S N L ++++ M KD ++D +E R + + IK N
Sbjct: 420 EG---GIIKSGYNAELDEIRNI-MNSGKDFLLD-----IEQREREATGIRNMKIKF-NKV 469
Query: 411 QGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEE 470
G+ IT + + + Y T+ R+ L + + E + + +E
Sbjct: 470 FGYFIEITKANLDMVPEHYIRKQTLSNSERYITPELKKYEDTIINSKAKIEDLEYHLFKE 529
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
+ G + + L++L++ LA DV+VSF++++ Y +P M S + RHP
Sbjct: 530 ISGKLKEHRKILSELAERLAYIDVMVSFAVSAI--ENDYAKPEMNE--EYSFEIEGGRHP 585
Query: 531 IVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
+VE L G Y+ ND F E SF ++TGPNM GKSTY++ I + +AQIG FVP
Sbjct: 586 VVEKLIGRTDYVSNDTVFTEKE-SFVVLTGPNMSGKSTYMKQIALISIMAQIGSFVPAKK 644
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A +S++D+ TR+GA+D G STFM+EM E + ++ TE SL+I+DE+GRGTST DG
Sbjct: 645 ANLSIIDKYLTRIGASDDILTGQSTFMVEMSEVSNILNNATEKSLIILDEVGRGTSTTDG 704
Query: 650 FGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
+A +I+ + T+FATH+HE+ L N ++ E++ ++ L +
Sbjct: 705 VSIATAISMYIHDKIGAKTVFATHYHELTDLENKFAHIVNYRIEVDEKQGKVMFLRNIVK 764
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
G KSYG+ AK+AG P+++L +++ ++K E
Sbjct: 765 GGADKSYGIEVAKLAGLPKEILVESKKILKRLE 797
>gi|227877609|ref|ZP_03995663.1| DNA mismatch repair protein MutS [Lactobacillus crispatus JV-V01]
gi|227862803|gb|EEJ70268.1| DNA mismatch repair protein MutS [Lactobacillus crispatus JV-V01]
Length = 865
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 295/610 (48%), Gaps = 49/610 (8%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 224 RQLVGYL-LSTQRRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVAS--AKTGKKMGSLFW 280
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 281 VLDKTHTAMGGRLLKQWLARPLLNMDEINHREEMVQALLDGYFTRENAVD-ALKGVYDLE 339
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------EASNLNTILSSLQS 371
L RI ++ ++ + +P ++ LE ++ + L + + S
Sbjct: 340 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALEQSDSDILVDFAKKIDPLKGVAEMITS 399
Query: 372 LKMMDRK-------------DAVMDKMKEYLESTARRL-NLVADKTIK--LENSPQG--- 412
+ D D +D+ ++ + + + L + AD+ K ++N G
Sbjct: 400 TIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLKVGYNK 459
Query: 413 -FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYETH 463
F Y I + N DRYT T+ R+ L Q ++ EY+
Sbjct: 460 VFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLF 519
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+ + E+V Y L +L LA DV F A+ Y RP V
Sbjct: 520 VK-LREDV----KKYIPALQKLGGQLAALDVYCGF--ATVAEQNNYCRPTFHADNQDINV 572
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
N RHP+VE + SYIPNDV G + L+TGPNM GKSTY+R + + +AQ+G
Sbjct: 573 TN-GRHPVVEKVMTAGSYIPNDVKMDEG-TNIYLITGPNMSGKSTYMRQMALIAIMAQVG 630
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE+GR
Sbjct: 631 SFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVLFDEIGR 690
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + L LFATH+HE+ ++ + +N+ V A E+ L+
Sbjct: 691 GTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTVMDETLDHLKNIHVGATEENGKLI 750
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEY 762
L+++ PG +SYG+H A++AG P ++L +A L+K E P + + E
Sbjct: 751 FLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLKRLEAQGSELAPVSQQLDLFAEPV 810
Query: 763 FKTVQEGEYQ 772
+V+E E Q
Sbjct: 811 ENSVEETETQ 820
>gi|423598919|ref|ZP_17574919.1| DNA mismatch repair protein mutS [Bacillus cereus VD078]
gi|401237189|gb|EJR43646.1| DNA mismatch repair protein mutS [Bacillus cereus VD078]
Length = 890
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|423488892|ref|ZP_17465574.1| DNA mismatch repair protein mutS [Bacillus cereus BtB2-4]
gi|423494617|ref|ZP_17471261.1| DNA mismatch repair protein mutS [Bacillus cereus CER057]
gi|423498592|ref|ZP_17475209.1| DNA mismatch repair protein mutS [Bacillus cereus CER074]
gi|423661391|ref|ZP_17636560.1| DNA mismatch repair protein mutS [Bacillus cereus VDM022]
gi|401151678|gb|EJQ59124.1| DNA mismatch repair protein mutS [Bacillus cereus CER057]
gi|401159250|gb|EJQ66635.1| DNA mismatch repair protein mutS [Bacillus cereus CER074]
gi|401301432|gb|EJS07021.1| DNA mismatch repair protein mutS [Bacillus cereus VDM022]
gi|402433247|gb|EJV65301.1| DNA mismatch repair protein mutS [Bacillus cereus BtB2-4]
Length = 890
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|303250832|ref|ZP_07337026.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253265|ref|ZP_07535139.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307257680|ref|ZP_07539439.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|302650345|gb|EFL80507.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859252|gb|EFM91291.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306863855|gb|EFM95779.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 864
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 204/697 (29%), Positives = 342/697 (49%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+P N EA+ + + L AE L IL+ K
Sbjct: 142 AIATLDMTSGRFLITELP------NKEALAAEL---QRLQLAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S V + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTVLLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ L + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QKEQRIELLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D R+ ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTRLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLERAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 MQLAAMALSELDVLTN--LAERAESLNYVRPTFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TENSLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KKTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
>gi|423592288|ref|ZP_17568319.1| DNA mismatch repair protein mutS [Bacillus cereus VD048]
gi|401230530|gb|EJR37037.1| DNA mismatch repair protein mutS [Bacillus cereus VD048]
Length = 890
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|423367756|ref|ZP_17345188.1| DNA mismatch repair protein mutS [Bacillus cereus VD142]
gi|401083409|gb|EJP91667.1| DNA mismatch repair protein mutS [Bacillus cereus VD142]
Length = 890
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLGQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|218232426|ref|YP_002368572.1| DNA mismatch repair protein MutS [Bacillus cereus B4264]
gi|226723052|sp|B7HDP4.1|MUTS_BACC4 RecName: Full=DNA mismatch repair protein MutS
gi|218160383|gb|ACK60375.1| DNA mismatch repair protein MutS [Bacillus cereus B4264]
Length = 890
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 790
>gi|150390307|ref|YP_001320356.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
gi|172052479|sp|A6TR79.1|MUTS_ALKMQ RecName: Full=DNA mismatch repair protein MutS
gi|149950169|gb|ABR48697.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
Length = 880
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 207/714 (28%), Positives = 354/714 (49%), Gaps = 65/714 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A VD+ T + EI ++ + L + + P+E L E ++ I I R
Sbjct: 138 GLAYVDISTGDLFATEIKENIHPQMLIDEMGRVLPQELLYFIETDKEDPTIISMIKKRFD 197
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLV-RFDDSELKNARLLPEMCLTTATHCLRSLINYLE-- 206
G + E+S ED +N++ F+ L+ P A +L +YL+
Sbjct: 198 FYTNGYE--EWSYEDTFA-LNQIKDHFNVVSLEGLGFHPSHLGINAAG---ALFHYLKTT 251
Query: 207 ---LMNNEDNMNQFSIHS-----IDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGI 258
+ + +++N +SIH I+ K + ++ + S ++GS LLG+
Sbjct: 252 QKRALEHINHINVYSIHEKMTLDINTRKNLELTETIRSK----SKKGS--------LLGV 299
Query: 259 LDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQS 318
LD+ T G R+L +W++ PL D I +R AV +L E R L E +L+ + D++
Sbjct: 300 LDKTSTAMGGRMLRKWIEAPLIDPVIINKRLEAVQLLKEQIELRQELKE-SLKKIYDLER 358
Query: 319 LAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE--------SLVQNVEA-SNLNTI--LS 367
LA +I +D + +S LP +I+ LE SLVQ+++ ++++ LS
Sbjct: 359 LAGKISYGSVTPRDLIALKNSLSYLPSIINGLEKIQGETFQSLVQSIDPLDEVHSLVELS 418
Query: 368 SLQSLKMMDRKDAVMDK-----MKEYLESTARRLNLVAD-----------KTIKLE-NSP 410
L+ + + ++ + + E ++ +A K++K++ N
Sbjct: 419 ILEDAPLSSKDGGIIQEGYHKEVDELKNASTEGRQWIAQLEQKERVNSGIKSLKIKYNKI 478
Query: 411 QGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEE 470
G+ IT + + Y T+ R+ L ++ + + + + E
Sbjct: 479 FGYYIEITKSNLSMVPTEYIRKQTLANCERYVTPELKEIESKILGAEEKVILLEYHLFIE 538
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
V A + Q + +A+ DVL SF A A +++P + +V + RHP
Sbjct: 539 VREKIAHEITRIQQTARAIAELDVLYSF--AEIAAENNFIKPHINTSNEIKIV--EGRHP 594
Query: 531 IVELQ-GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
+VEL S++PND Y + + S +++TGPNM GKSTY+R + + V +AQIG FVP
Sbjct: 595 VVELTFNKESFVPNDTYMDNRDCSMSIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASE 654
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A+I +VD+IFTR+GA+D +G STFM+EM E A ++ T NSLVI+DE+GRGTSTFDG
Sbjct: 655 ASIGIVDRIFTRIGASDDLAQGHSTFMVEMSEMANILNNATANSLVILDEIGRGTSTFDG 714
Query: 650 FGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
+A ++ + +++ TLF+TH+HE+ L I +N + E + +V L +V
Sbjct: 715 LSIAWAVIEYMQQYKKSKTLFSTHYHELTELEGKIQGVKNYNILVEEDGEEIVFLRKVVS 774
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-YSLDTKTPSGDETN-NREEE 761
GS KSYG+ AK+AG P + L +A++++ + E + + K P+ +E +RE E
Sbjct: 775 GSTSKSYGIQVAKLAGLPLNTLIRAQEILSDLEKKNNEIKIPAEEEIALSRESE 828
>gi|227529690|ref|ZP_03959739.1| DNA mismatch repair protein MutS [Lactobacillus vaginalis ATCC
49540]
gi|227350480|gb|EEJ40771.1| DNA mismatch repair protein MutS [Lactobacillus vaginalis ATCC
49540]
Length = 877
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 264/535 (49%), Gaps = 39/535 (7%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L +LD +T G RLL +W+ +PL D I R V L+ + R N+ +
Sbjct: 270 SGKRQGTLAWLLDETKTAMGSRLLKRWLDRPLIDPKQISARQDKVQELLEHYFERNNIQQ 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEAS------N 361
++ + D++ LA R+ +D ++ + Q+PK+ LE+L A
Sbjct: 330 ELIK-VYDLERLAGRVAYGSVNGRDLIQLKTSLLQVPKIKYTLETLDAPAFADLEKQLDP 388
Query: 362 LNTILSSLQSLKMMDR----------KDAVMDKMKEYLESTARRLNLVAD------KTIK 405
L+ + S +++ + D KD ++ EY ++ +AD +
Sbjct: 389 LSDVASLIENSIVEDPPISVTDGGVIKDGYDQQLDEYRDAMNNGKQWIADLQKHEREVTG 448
Query: 406 LENSPQG----FAYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
+ N G F Y I + LN DRY T+ RF L Q
Sbjct: 449 INNLKIGYNHVFGYYIEVTKVNLNKIPRDRYERKQTLVNAERFSTPELKEKEALILGAQE 508
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+ + + ++ + L L+ L++ DVL SF++ S +VRP M
Sbjct: 509 KSTALEYDVFVKIREKVKKQIKRLQSLAQALSELDVLQSFAVVSEDYH--FVRPQM---N 563
Query: 519 TGS-LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
TG L + RHP+VE G Y+PNDV L+TGPNM GKSTY+R + ++
Sbjct: 564 TGHVLKIKDGRHPVVEKFMGHQEYVPNDVMMDES-TDILLITGPNMSGKSTYMRQLALTA 622
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+GCFVP + A + + DQIFTR+GAAD G STFM+EM E + T+ SL++
Sbjct: 623 VMAQMGCFVPAERAELPIFDQIFTRIGAADDLISGESTFMVEMMEANNALMHATDRSLIL 682
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGT+T+DG +A +I + H + TLF+TH+HE+ L + +NV V A E
Sbjct: 683 FDEIGRGTATYDGMALAQAIIEYIHEHLRAKTLFSTHYHELTALETTLSRLKNVHVGATE 742
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
+ LV L++V G KSYG+H AK+AG PED+L++A ++ E D K P+
Sbjct: 743 KNGELVFLHKVSAGPADKSYGIHVAKLAGMPEDLLKRADQILSSLEKK-DVKLPT 796
>gi|417901337|ref|ZP_12545213.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21266]
gi|341845176|gb|EGS86378.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21266]
Length = 872
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 287/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLITKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y+RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYIRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|319892317|ref|YP_004149192.1| DNA mismatch repair protein MutS [Staphylococcus pseudintermedius
HKU10-03]
gi|317162013|gb|ADV05556.1| DNA mismatch repair protein MutS [Staphylococcus pseudintermedius
HKU10-03]
Length = 865
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/526 (32%), Positives = 274/526 (52%), Gaps = 49/526 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL ++D+ +TP G R L QW+ +PL I +RH AV+ ++ R L +Y L +
Sbjct: 271 TLLWLMDKTKTPMGARRLKQWVDRPLIQQAEIAKRHDAVDQFLHYFIERDTLRDY-LTEV 329
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEA-----SNLNTILSS 368
D++ L R+ KD ++ ++Q+P + ++L+S+ A L+ +L
Sbjct: 330 YDIERLVGRVSFGNVNAKDLVQLKHSIAQIPAIKALLQSIEHEAIAHFNALEPLDDLLQV 389
Query: 369 LQSLKMMDR-----------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
L S ++D K +++ +YL+++ +A K++K+
Sbjct: 390 L-SDSLVDEPPLSVKEGGLFKAGFNEELDQYLDASKNGKQWLAQLQAQERERTGIKSLKI 448
Query: 407 E-NSPQGFAYRITMKLNNSIDDR---YTILDTVRGGVRFQDDRLATA-----NTQYQAIQ 457
N G+ IT + D Y T+ RF D L Q +AI+
Sbjct: 449 SFNKVFGYYIEITRANLSQFDPSAFGYERKQTLSNAERFITDELKEKEAIILGAQDKAIE 508
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ ++ E+V Y + L Q + ++++ D L SF A YVRP
Sbjct: 509 LEYQLFV-ALREQV----KTYIERLQQQAKIISEIDCLQSF--AEIAQQYNYVRPQFSED 561
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
T LV RHP+VE + Y+PND + + + L+TGPNM GKSTY+R + +
Sbjct: 562 KTLKLV--DSRHPVVERVMDYNDYVPNDCLLNTEQFIY-LITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQ+G FVPC SAT+ + DQIFTR+GAAD G STFM+EM E +K T +SL+I
Sbjct: 619 IMAQMGAFVPCQSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALKYATADSLII 678
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGTST+DG +A ++ +A Q TLF+TH+HE+ L + +P+ +NV V+A E
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEYVAETSQAKTLFSTHYHELTELEQHLPSLKNVHVAADE 738
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ L+ L++VK G+ SYG+ A++A PE ++ +A+ ++ +E
Sbjct: 739 YQGELIFLHKVKDGAVANSYGIQVAQLADLPEQVIARAQVILDTFE 784
>gi|209525557|ref|ZP_03274096.1| DNA mismatch repair protein MutS [Arthrospira maxima CS-328]
gi|376001977|ref|ZP_09779829.1| DNA methyl-directed mismatch repair protein MutS [Arthrospira sp.
PCC 8005]
gi|423062134|ref|ZP_17050924.1| DNA mismatch repair protein MutS [Arthrospira platensis C1]
gi|209494056|gb|EDZ94372.1| DNA mismatch repair protein MutS [Arthrospira maxima CS-328]
gi|375329643|emb|CCE15582.1| DNA methyl-directed mismatch repair protein MutS [Arthrospira sp.
PCC 8005]
gi|406716042|gb|EKD11193.1| DNA mismatch repair protein MutS [Arthrospira platensis C1]
Length = 883
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 184/593 (31%), Positives = 294/593 (49%), Gaps = 65/593 (10%)
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
L+ YLE ++ + +HS S Y+ + +L + Q SLL +
Sbjct: 272 GLLEYLEETQKQNAVPLQQLHSYTLSDYLILDYQTRRNLEI--TQTIRDGTLQGSLLWAI 329
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D+ T G R L +W+ QPL + I R+ + L+NN E R +L + LR + D++ L
Sbjct: 330 DQTSTAMGARALRRWLLQPLLSIKGICSRYDTIQELINNAELRQDLQQL-LRKIYDLERL 388
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-------VQNVE------ASNLNTIL 366
R A KD + + +S+LP+L ++ +S +QNV A +N+ L
Sbjct: 389 TGRAANGTANAKDLVSLADSLSKLPQLAALAKSAKSPYLKALQNVPPLLEELARKINSYL 448
Query: 367 SSLQSLKMMDR---KDAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQ 411
L + + K V ++ + A +A+ T+K+ N
Sbjct: 449 VESPPLYLKEGGLIKPGVDPQLDQMQAGAAEDQQWIANLEIQERERTGIPTLKVGFNKTF 508
Query: 412 GFAYRITMKLNNSIDDRYTILDTVRGGVRF-------QDDRLATANTQYQAIQREYETHQ 464
G+ IT ++ D Y T+ R+ ++ R+ TA Q EYE
Sbjct: 509 GYYISITRSKSDQAPDDYIRKQTLTNEERYITPELKEREARILTAKEDLN--QLEYEIFA 566
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ + +EV +T + ++S +A DVL +A + Y RP + +G L +
Sbjct: 567 R-LRDEV----GEHTDLIREISRAIAAIDVLCG--LAEIAVYQGYCRPEI--VGGRELRI 617
Query: 525 NQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFN-------------LVTGPNMGGKSTYI 569
+ RHP+VE L G ++PN S EV+ ++TGPN GKS Y+
Sbjct: 618 IEGRHPVVEKSLPAGF-FVPNTAQLGSPEVTLPTADISPPSHPDLIILTGPNASGKSCYL 676
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R IG+ +AQIG FVP SA +S+ D+IFTRVGA D G STFM+EM ETA ++
Sbjct: 677 RQIGLIQLMAQIGSFVPATSAKLSICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHA 736
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T SLV++DE+GRGT+TFDG +A S+A LA+ + T+FATH+HE+ L+ ++ N
Sbjct: 737 TPKSLVLLDEIGRGTATFDGLSIAWSVAEYLATTIKARTIFATHYHELNELASILDNVAN 796
Query: 690 VQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
QV+ E D ++ L+QV+PG KSYG+ ++AG P+ ++++A+ +M++ E
Sbjct: 797 YQVTVKELPDKIIFLHQVQPGGADKSYGIEAGRLAGLPDVVIKRAKQVMRQIE 849
>gi|347727199|gb|AEP19957.1| DNA mismatch repair protein MutS [Bacillus sp. 15.4]
Length = 648
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 272/524 (51%), Gaps = 46/524 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD T G R+L +W+ +PL D + I +RH+ V +L R ++ E L+ +
Sbjct: 91 SLLWLLDETMTAMGARMLKRWIDRPLIDQEEIEKRHSLVELLQERFFEREDIREL-LKEV 149
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-------- 365
D++ LA R+ +D ++ + +SQ+P L ++ L + L I
Sbjct: 150 YDLERLAGRVAFGNVNARDLIQLRKSLSQIPLLKNLFSELGHEIADEMLKAIDPCEELTV 209
Query: 366 -----LSSLQSLKMMDR---KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
L L + + KD +++ +Y +++ N +A +++K+
Sbjct: 210 TLQDSLHEQPPLSIKEGNIIKDGFHEELDQYRDASRNGKNWIAQLEREERERTGIRSLKV 269
Query: 407 E-NSPQGFAYRITMKLNNSIDD-RYTILDTVRGGVRF-----QDDRLATANTQYQAIQRE 459
N G+ +T ++++ RY T+ RF ++ + I E
Sbjct: 270 GYNRVFGYYIEVTRANLGALEEGRYERKQTLTNAERFITPELKEKEALILQADEKCIDLE 329
Query: 460 YETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGT 519
Y ++ E+ Y L +L+ ++++ DVL F A+ + YV+P
Sbjct: 330 Y-----NLFLELRETVKEYIPRLQKLARIVSEIDVLQCF--ATVSEKRHYVKPSFNR--E 380
Query: 520 GSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+V+ RHP+VE + Y+PND Y E LVTGPNM GKSTY+R + ++ L
Sbjct: 381 RRIVIKDGRHPVVEKVMDAQEYVPNDCYMDQ-EREILLVTGPNMSGKSTYMRQLALTAIL 439
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQIGC+VP A++ + DQ+FTR+GAAD G STFM+EM E I T++SL++ D
Sbjct: 440 AQIGCYVPASEASLPIFDQVFTRIGAADDLISGQSTFMVEMLEAKNAITNATQDSLILFD 499
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQE 698
E+GRGTST+DG +A +I + + TLF+TH+HE+ +L + + +N+ VSA+E
Sbjct: 500 EIGRGTSTYDGMALAQAIIEYIHEGIKAKTLFSTHYHELTILEQELENVKNIHVSAMEHN 559
Query: 699 DNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
NLV L+++K G+ KSYG+H A++A PE ++ +A +++++ E
Sbjct: 560 GNLVFLHKIKEGAADKSYGIHVAQLAELPEKLIFRANEILEKLE 603
>gi|229191894|ref|ZP_04318864.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 10876]
gi|228591445|gb|EEK49294.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 10876]
Length = 884
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 784
>gi|418283037|ref|ZP_12895794.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21202]
gi|418559307|ref|ZP_13123853.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21252]
gi|418993916|ref|ZP_13541552.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG290]
gi|365168634|gb|EHM59972.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21202]
gi|371975598|gb|EHO92892.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21252]
gi|377745966|gb|EHT69941.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG290]
Length = 872
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 286/569 (50%), Gaps = 58/569 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQN--VEASNLN-------TILSSLQSLKMMDRKDAVMDK---- 384
+S++P + ++L S+ Q+ V+ + L + SL + KD + K
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVQVNQLEPLDDLLDILDQSLVEEPPISVKDGGLFKVGFN 414
Query: 385 --MKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
+ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PND E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNDCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
K+A PE ++ +A+ ++ E+E S K+P
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKSP 793
>gi|379014493|ref|YP_005290729.1| DNA mismatch repair protein MutS, partial [Staphylococcus aureus
subsp. aureus VC40]
gi|374363190|gb|AEZ37295.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus VC40]
Length = 667
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 39 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 90
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 91 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 149
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 150 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 209
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 210 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 269
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 270 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 324
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 325 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 380
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 381 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 439
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 440 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 499
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 500 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 559
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 560 KLADLPEKVISRAQVILSEFEASAGKKS 587
>gi|229146341|ref|ZP_04274712.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST24]
gi|228636974|gb|EEK93433.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST24]
Length = 884
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 784
>gi|49478366|ref|YP_037830.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|81696708|sp|Q6HF46.1|MUTS_BACHK RecName: Full=DNA mismatch repair protein MutS
gi|49329922|gb|AAT60568.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 890
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKE 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|85818143|gb|EAQ39303.1| DNA mismatch repair protein MutS [Dokdonia donghaensis MED134]
Length = 863
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 294/604 (48%), Gaps = 43/604 (7%)
Query: 191 LTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQ 250
LT + ++YL + + SI I YV M + +L + A
Sbjct: 217 LTAGVIAAGAALHYLGETQHHKLQHITSISRIAADDYVWMDRFTIRNLELYNSASGVKAI 276
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEA--RMNLHEY 308
T L+ I+D+ + G RLL +W+ PLK +D I RH V+ L +N +M H
Sbjct: 277 T---LIDIIDKTTSAMGGRLLKRWLALPLKRVDEIKRRHEVVSFLSDNGNIFDKMQGH-- 331
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRV---YEGVSQLPKLIS--------ILESLVQNV 357
++ + D++ L ++ K ++ ++ E + + L S I+ +QN
Sbjct: 332 -IKQIGDLERLISKVATAKISPREVIQLKNSLEAIVPIKTLASGTDNESLKIIGEQLQNC 390
Query: 358 EA--SNLNTILSSLQSL-------------KMMDRKDAVMDKMKEYLEST-ARRLNLVAD 401
E S + L + K +D A+ K+YLE R
Sbjct: 391 EVLRSKIKETLREEAPVSIVKGGAIAPGFHKELDDLRALSQGGKDYLEKMLERETERTGI 450
Query: 402 KTIKL-ENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
++K+ N+ G+ + + + + + T+ R+ D L + +
Sbjct: 451 TSLKIASNNVFGYYIEVRNTHKDKVPEEWIRKQTLVNAERYITDELKEYEGKILGAEERI 510
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ +Q + E++ G+ + + +AQ D L+ F+ YVRP + +
Sbjct: 511 QGIEQQLFAELVSWVGGFIPQVQANATQIAQLDCLLGFT--QLARENNYVRPTLDE--SQ 566
Query: 521 SLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+ + + RHP++E L G +Y+ NDVY S + ++TGPNM GKS +R + V L
Sbjct: 567 VIDIKEGRHPVIEKQLPLGEAYVTNDVYLDSADQQMIMITGPNMSGKSAILRQTALIVLL 626
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQ+G FVP +A I +VD+IFTRVGA+D+ G STFM+EM ETA+++ ++ SLV++D
Sbjct: 627 AQMGSFVPAQAAHIGLVDKIFTRVGASDNISMGESTFMVEMNETASILNNLSDRSLVLLD 686
Query: 639 ELGRGTSTFDGFGMACSIARELASHR-QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
E+GRGTST+DG +A +I+ L HR +P TLFATH+HE+ + +N VS E
Sbjct: 687 EIGRGTSTYDGISIAWAISEYLHEHRGRPKTLFATHYHELNEMCETFERIKNYNVSVKEL 746
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+DN++ L ++ PG S+G+H AKMAG P+ +L +A +M + E S ++ +G +
Sbjct: 747 KDNVLFLRKLVPGGSAHSFGIHVAKMAGMPQQVLRRATKMMGKLEKSHGSEELTGTLKDA 806
Query: 758 REEE 761
EEE
Sbjct: 807 AEEE 810
>gi|229012953|ref|ZP_04170118.1| DNA mismatch repair protein mutS [Bacillus mycoides DSM 2048]
gi|229061372|ref|ZP_04198718.1| DNA mismatch repair protein mutS [Bacillus cereus AH603]
gi|228717911|gb|EEL69557.1| DNA mismatch repair protein mutS [Bacillus cereus AH603]
gi|228748207|gb|EEL98067.1| DNA mismatch repair protein mutS [Bacillus mycoides DSM 2048]
Length = 884
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 784
>gi|423437224|ref|ZP_17414205.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4X12-1]
gi|401120379|gb|EJQ28175.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4X12-1]
Length = 890
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLNQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 790
>gi|229168509|ref|ZP_04296232.1| DNA mismatch repair protein mutS [Bacillus cereus AH621]
gi|228614915|gb|EEK72017.1| DNA mismatch repair protein mutS [Bacillus cereus AH621]
Length = 884
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TN 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 784
>gi|347727130|gb|AEP19923.1| DNA mismatch repair protein [Exiguobacterium sp. N39]
Length = 841
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 294/566 (51%), Gaps = 66/566 (11%)
Query: 221 SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLK 280
++ Y HM ++ ++ + + S + SLL +LD T G RLL +W++QPL
Sbjct: 236 AVAYEVEAHMQLDANTARNLELFRSARSGERKGSLLALLDETTTAMGGRLLKRWLEQPLY 295
Query: 281 DLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGV 340
AI +R AV LV++ R L E LR + D++ L ++G A +D ++ +
Sbjct: 296 TEQAIRDRQDAVENLVDDFMLRDQLRE-QLRHVYDIERLVAKVGYGTANARDLVQLRNTL 354
Query: 341 SQLPKLISILESLVQNVEASNLNTILSSLQSLKMM-DRKDAVM----------------- 382
++P + L+ NV A+ L+ I ++L + + +R A +
Sbjct: 355 ERIPAV----RELLANVTATRLHHIDATLDTFDALSERLQAALVETPPISIKEGGMIRSG 410
Query: 383 --DKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSI--D 426
++ E LE+ A +A+ K++K+ N G+ +T K N + +
Sbjct: 411 YSTELDELLEAKANGKTWIANLEQQERLATGIKSLKIGYNRVFGYYLEVT-KANARLLEE 469
Query: 427 DRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYE---THQQSIVEEVIGISAGY 478
RY T+ R+ ++ + ++ EY+ T ++ + +E
Sbjct: 470 GRYERKQTLTNAERYVTPELKEKEALILGAEEKSCTLEYDLFVTLREEVKQE-------- 521
Query: 479 TQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE--LQG 536
T+ L QL+ L++ DVL++ +I + YVRP + ++ +++ RHP++E L
Sbjct: 522 TKPLQQLARSLSELDVLLALAI--VAEKRDYVRPTT----SNNVQIDRGRHPVIETVLPR 575
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
G Y+ ND+ L+TGPNM GKSTY+R + L QIG FVP ++A + + D
Sbjct: 576 G-EYVANDLTLDDTRRML-LITGPNMSGKSTYMRQFALIAILHQIGSFVPAEAAELPLFD 633
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
+IFTR+GAAD G STFM+EM ET + + T +SL+++DE+GRGTST+DG +A +I
Sbjct: 634 RIFTRIGAADDLVSGQSTFMVEMTETRQAVTEATAHSLILLDEIGRGTSTYDGMALAQAI 693
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+A+ TLF+TH+HE+ +L IP NV V A+E++ +V L++V PG KSY
Sbjct: 694 VEYIAATIGAKTLFSTHYHELTVLEDTIPALENVHVRAIERDGRVVFLHEVHPGRADKSY 753
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYE 742
G+H A++A P D++E+AR ++ E E
Sbjct: 754 GIHVAELADLPPDLIERARTILSELE 779
>gi|296504268|ref|YP_003665968.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|423585820|ref|ZP_17561907.1| DNA mismatch repair protein mutS [Bacillus cereus VD045]
gi|423628850|ref|ZP_17604599.1| DNA mismatch repair protein mutS [Bacillus cereus VD154]
gi|423641148|ref|ZP_17616766.1| DNA mismatch repair protein mutS [Bacillus cereus VD166]
gi|423649634|ref|ZP_17625204.1| DNA mismatch repair protein mutS [Bacillus cereus VD169]
gi|423656630|ref|ZP_17631929.1| DNA mismatch repair protein mutS [Bacillus cereus VD200]
gi|296325320|gb|ADH08248.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|401233166|gb|EJR39662.1| DNA mismatch repair protein mutS [Bacillus cereus VD045]
gi|401268395|gb|EJR74443.1| DNA mismatch repair protein mutS [Bacillus cereus VD154]
gi|401280209|gb|EJR86131.1| DNA mismatch repair protein mutS [Bacillus cereus VD166]
gi|401282914|gb|EJR88811.1| DNA mismatch repair protein mutS [Bacillus cereus VD169]
gi|401290371|gb|EJR96065.1| DNA mismatch repair protein mutS [Bacillus cereus VD200]
Length = 890
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 790
>gi|347727002|gb|AEP19859.1| DNA mismatch repair protein [Exiguobacterium sp. EPVM]
Length = 841
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 286/558 (51%), Gaps = 50/558 (8%)
Query: 221 SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLK 280
++ Y HM ++ ++ + + S + SLL +LD T G RLL +W++QPL
Sbjct: 236 AVAYEVEAHMQLDANTARNLELFRSARSGERKGSLLALLDETTTAMGGRLLKRWLEQPLY 295
Query: 281 DLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGV 340
AI +R AV LV++ R L E LR + D++ L ++G A +D ++ +
Sbjct: 296 TEQAIRDRQDAVENLVDDFMLRDQLRE-QLRHVYDIERLVAKVGYGTANARDLVQLRNTL 354
Query: 341 SQLPKLISILESLVQNVEASNLNTIL--------------SSLQSLKMMDRKDAVM---- 382
++P + ++LE V AS L I ++L + K+ M
Sbjct: 355 ERIPAVRALLE----GVTASRLRQIDDTLDTFDDLASMLQAALVEAPPISIKEGGMIRAG 410
Query: 383 --DKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSI--D 426
++ E LE+ A +A+ K++K+ N G+ +T K N + +
Sbjct: 411 YSAELDELLEAKANGKTWIANLEQQERVATGIKSLKIGYNRVFGYYLEVT-KANARLLEE 469
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
RY T+ R+ L + + T + + + T+ L QL+
Sbjct: 470 GRYERKQTLTNAERYVTPELKEKEALILGAEEKSWTLEYDLFVALRDQVKQETKPLQQLA 529
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE--LQGGVSYIPND 544
L++ DVL++ +I + YVRP + ++ +++ RHP++E L G Y+ ND
Sbjct: 530 RSLSELDVLLALAI--VAEKRDYVRPTT----STNVQIDRGRHPVIETVLPRG-EYVAND 582
Query: 545 VYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGA 604
+ L+TGPNM GKSTY+R + L QIG FVP ++A I + D+IFTR+GA
Sbjct: 583 LTLDDTRRML-LITGPNMSGKSTYMRQFALIAILHQIGSFVPAEAAEIPLFDRIFTRIGA 641
Query: 605 ADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR 664
AD G STFM+EM ET + + TE+SL+++DE+GRGTST+DG +A +I +AS
Sbjct: 642 ADDLVSGQSTFMVEMTETRQAVTEATEHSLILLDEIGRGTSTYDGMALAQAIVEYIASTI 701
Query: 665 QPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMA 724
TLF+TH+HE+ +L IP NV V A+E++ +V L++V PG KSYG+H A++A
Sbjct: 702 GAKTLFSTHYHELTVLEDTIPALENVHVRAIERDGRVVFLHEVHPGRADKSYGIHVAELA 761
Query: 725 GYPEDMLEQARDLMKEYE 742
P D++E+AR ++ + E
Sbjct: 762 ELPRDLIERARTILSQLE 779
>gi|229047452|ref|ZP_04193044.1| DNA mismatch repair protein mutS [Bacillus cereus AH676]
gi|229151970|ref|ZP_04280166.1| DNA mismatch repair protein mutS [Bacillus cereus m1550]
gi|228631525|gb|EEK88158.1| DNA mismatch repair protein mutS [Bacillus cereus m1550]
gi|228723896|gb|EEL75249.1| DNA mismatch repair protein mutS [Bacillus cereus AH676]
Length = 884
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 784
>gi|423401404|ref|ZP_17378577.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-2]
gi|423477891|ref|ZP_17454606.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6X1-1]
gi|401654394|gb|EJS71937.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-2]
gi|402428816|gb|EJV60908.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6X1-1]
Length = 890
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 279/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLASLPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLGQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|86141815|ref|ZP_01060339.1| putative DNA mismatch repair protein MutS [Leeuwenhoekiella
blandensis MED217]
gi|85831378|gb|EAQ49834.1| putative DNA mismatch repair protein MutS [Leeuwenhoekiella
blandensis MED217]
Length = 875
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 179/591 (30%), Positives = 289/591 (48%), Gaps = 66/591 (11%)
Query: 218 SIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
SI I YV + + +L + QG TSA+ +LL ++D+ +P G RLL +W+
Sbjct: 257 SIGRIAEDAYVWLDRFTIRNLELY--QG-TSAKAI-TLLDVIDKTISPMGGRLLKRWLAL 312
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG------LK 331
PLK L+ I ERHA V ++N+T+ + + ++ + D++ L ++ K LK
Sbjct: 313 PLKTLETIKERHAIVEFIINHTDFHEKIATH-IKKIGDVERLISKVATGKVSPREIILLK 371
Query: 332 DCYRVYEGVSQLP-----KLISILESLVQNVE------------------------ASNL 362
+ V L K + IL + N+E AS
Sbjct: 372 NSLEAMIPVKSLAENADNKALQILGEKINNLEHLRTKIKETINEDAPVNVLKGNSIASGF 431
Query: 363 NTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLENSPQGFAYRITMKLN 422
N L L++L + +DKM LE + + + K N+ G+ +
Sbjct: 432 NQELDELRNLATSGKD--YLDKM---LERETEQTGITSLKIAS--NNVFGYYIEVRNTHK 484
Query: 423 NSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ + + + T+ R+ D L + + T +Q + E++ + + +
Sbjct: 485 DKVPESWIRKQTLVNAERYITDELKEYEAKILGAEERILTIEQQLFAELVTWITQFIEPV 544
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVS--Y 540
+ ++AQ D L S+ A+ Y RP + + L + + RHP++E Q +S Y
Sbjct: 545 QTNAYIIAQLDCLRSY--ATLAQENNYCRPELD--DSFELEITEGRHPVIEKQLPISEPY 600
Query: 541 IPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFT 600
I ND Y ++TGPNM GKS +R + V LAQ+G FVP +A I +VD+IFT
Sbjct: 601 IANDTYLDRDSQQMIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAQAARIGIVDRIFT 660
Query: 601 RVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAREL 660
RVGA+D+ G STFM+EM ETA+++ +E SLV++DE+GRGTST+DG +A +I+ L
Sbjct: 661 RVGASDNISMGESTFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAISEYL 720
Query: 661 ASH-RQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVH 719
H +P TLFATH+HE+ + +N VS E +DN++ L ++ PG S+G+H
Sbjct: 721 HEHPARPKTLFATHYHELNDMGETFSRIKNYNVSVKELKDNVLFLRKLIPGGSAHSFGIH 780
Query: 720 CAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGE 770
AKMAG P+ +L +A ++ + E S NR+EE + + E
Sbjct: 781 VAKMAGMPQQVLHRANKMLAQLEKS------------NRKEEQKAALNQAE 819
>gi|423395931|ref|ZP_17373132.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-1]
gi|401653673|gb|EJS71217.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-1]
Length = 893
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TT 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 NREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|87160655|ref|YP_493885.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|384864522|ref|YP_005749881.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|387142903|ref|YP_005731296.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TW20]
gi|418281362|ref|ZP_12894173.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21178]
gi|418875231|ref|ZP_13429491.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418883902|ref|ZP_13438097.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1769]
gi|87126629|gb|ABD21143.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|269940786|emb|CBI49168.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TW20]
gi|312829689|emb|CBX34531.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|365165184|gb|EHM57012.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21178]
gi|377714989|gb|EHT39187.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377770291|gb|EHT94053.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC93]
Length = 840
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 212 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 263
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 264 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 322
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 323 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 382
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 383 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 442
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 443 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 497
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 498 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 553
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 554 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 612
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 613 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 672
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 673 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 732
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 733 KLADLPEKVISRAQVILSEFEASAGKKS 760
>gi|228954046|ref|ZP_04116075.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229071266|ref|ZP_04204490.1| DNA mismatch repair protein mutS [Bacillus cereus F65185]
gi|229180046|ref|ZP_04307390.1| DNA mismatch repair protein mutS [Bacillus cereus 172560W]
gi|228603255|gb|EEK60732.1| DNA mismatch repair protein mutS [Bacillus cereus 172560W]
gi|228711887|gb|EEL63838.1| DNA mismatch repair protein mutS [Bacillus cereus F65185]
gi|228805612|gb|EEM52202.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 884
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/526 (32%), Positives = 273/526 (51%), Gaps = 50/526 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LENSPQGFAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQ 457
+ + F Y I + N + RY T+ RF D L T + + +Q
Sbjct: 450 I-GYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQ 508
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 509 LEYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT- 560
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 -KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVT 618
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 619 VMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLIL 678
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E
Sbjct: 679 FDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLNQLKNVHVSAIE 738
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ +V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 739 ENGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 784
>gi|172087850|emb|CAQ35081.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
Length = 872
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMVEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|423406806|ref|ZP_17383955.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-3]
gi|401660096|gb|EJS77579.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-3]
Length = 893
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TT 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 NREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|281206806|gb|EFA80990.1| Muts-like protein [Polysphondylium pallidum PN500]
Length = 1231
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 211/756 (27%), Positives = 360/756 (47%), Gaps = 78/756 (10%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK-NKIVTILDR 147
+G+ +D FY+ E DD+ S+LE +++Q PKE L ++ N I +L R
Sbjct: 495 LGICFLDSSVGLFYLTEFKDDENRSHLETLLLQTMPKEILYDKSSISQTTLNVIKRVLSR 554
Query: 148 NKVCMTGRKKNEFSEEDL-------MQDVNRLVRF--DDSELKNARLLPEMCLTTATHCL 198
K +T R+ EF D MQ + L + D+ E++++ L + L
Sbjct: 555 EKYILTTRQPTEFWSTDFTLGKLEEMQKADDLKKVLGDNIEVEHSLL---------GYAL 605
Query: 199 RSLINYLELMNNEDNMNQ---FSIH-SIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDS 254
YLE + D + + F ++ ++D + + + + +L + +T T S
Sbjct: 606 GGCCCYLEDIKMADQVTKQARFEMYNTLDGTSSLVLDGQSLVNLEIFA--NTTDGSTNGS 663
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
L +LDRC TP G RLL QW+ +PL + I ER AV L N E L R +P
Sbjct: 664 LFKVLDRCSTPFGKRLLKQWVCRPLSSREKINERLDAVQYLGENQELMSKLSTMLTR-VP 722
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE--------SLVQNVEAS----NL 362
D++ + RI + + D V + + + + L+ +L +V NL
Sbjct: 723 DLERMLSRIKACSSKIGDLVTVLNVLERCQQCLEELDCVDEINSPTLQYHVTVGKGFPNL 782
Query: 363 NTILSSLQSL-------------------KMMDRKDAVMDKMKEYLESTARRL--NLVAD 401
T++SS++S + +R A+ +++++L+ + N +A
Sbjct: 783 KTLISSMRSSFEINVVQLIPSKGLFTEYDECQERIKAIEQELEQHLKDQKKLFSSNSIAY 842
Query: 402 KTIKLE----NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDR---LATANTQYQ 454
K+I E P + K+ + I + R F + + LA N +
Sbjct: 843 KSIGKEIYQLEIPIDVYNKHKAKMGDYIYKSELKSKSKRYWTPFIEKKVKQLAEENDSFS 902
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
A+Q+ E ++E ++A Q + LAQ D ++S + S A RP +
Sbjct: 903 ALQKVVEVR----IQEQFNVNAS---AWCQATASLAQIDCILSLAKVSHLAGITTCRPEI 955
Query: 515 KPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFK-SGEVSFNLVTGPNMGGKSTYIRSIG 573
L + RHP + L+GG +IPND+ + ++TGPNMGGKST +R
Sbjct: 956 VISDHALLDAKEMRHPAITLKGGDDFIPNDITLGIDQQPGVMVLTGPNMGGKSTLLRQCC 1015
Query: 574 VSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENS 633
+ V +AQ+GC+VP S +S+VD+IFTR+GA D+ G STFM+E++ET+ V+K T+ S
Sbjct: 1016 ILVIMAQLGCYVPAASCRLSIVDRIFTRLGANDNIMAGQSTFMLELQETSNVLKYATKRS 1075
Query: 634 LVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVS 693
LVI+DELGRGTSTFDG+ +A S+ +++ +FATH+ +A +V + +S
Sbjct: 1076 LVIMDELGRGTSTFDGYSIAFSVLDYISNKINCMCIFATHYQSLAHEPKVAKAIQKSHMS 1135
Query: 694 AL--EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
+ E ++ LY++ G C SYG+ MAG P +++ +A + +++E T
Sbjct: 1136 CYVDDVEKKVIFLYKLTEGVCPASYGMLVGGMAGIPSEVIAKAEEKAEQFEKESTVSTYV 1195
Query: 752 GDETNNRE--EEYFKTVQEGEYQMFDFLQQCLSLSK 785
T+ +E ++ ++V +Y+ L + L ++K
Sbjct: 1196 HGTTSTKEIVKKITQSVGSKDYKKLLELWKTLDINK 1231
>gi|225010431|ref|ZP_03700902.1| DNA mismatch repair protein MutS [Flavobacteria bacterium MS024-3C]
gi|225005260|gb|EEG43211.1| DNA mismatch repair protein MutS [Flavobacteria bacterium MS024-3C]
Length = 897
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/582 (30%), Positives = 287/582 (49%), Gaps = 59/582 (10%)
Query: 212 DNMNQFS-IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRL 270
D ++ S ++ I YV M + +L + ++A SLL ++D+ TP G RL
Sbjct: 275 DKLSHISRLNRIAADAYVWMDRFTIKNLELF----QSNAPDGISLLEVIDKTTTPMGGRL 330
Query: 271 LAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK--- 327
L +W+ PLKD AI RH V+ L NT E AL+ + D++ L ++ K
Sbjct: 331 LKRWLALPLKDQKAIEARHQIVSHLQENTALEQRF-EQALKSIGDLERLISKVATTKISP 389
Query: 328 ----------------------AGLKDCYRVYEGVSQL-PKLISILESLVQNVE------ 358
+G K + EG+ L P SI+ L +
Sbjct: 390 REMVQLKNTLLALGPIKSLAAASGQKALAHLAEGIDPLEPFTQSIMACLAEEAPVVIGKG 449
Query: 359 ---ASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKL-ENSPQGFA 414
A + L L+ L +K +D M AR + ++K+ N+ G+
Sbjct: 450 TTIAPGYHNALDELRDLSSAGKKH--LDAM------LAREMERTGISSLKIASNNVFGYY 501
Query: 415 YRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
+ + + + + T+ R+ + L T T+ Q E + +Q++ EE++
Sbjct: 502 IEVRNTHKDKVPEDWIRKQTLVNAERYITEELKTYETKILGAQEEILSIEQALFEELVSK 561
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG-SLVLNQCRHPIVE 533
+ + + + + +A D L FSI + + Y C+ + G SL L RHP++E
Sbjct: 562 AQAFIVPVQKNAHQVATLDCLCGFSILAR--EQNY---CLPYLDQGCSLDLKGARHPVIE 616
Query: 534 LQGGV--SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSAT 591
Q V Y+ ND++ ++TGPNM GKS +R + V +AQ+G FVP SA
Sbjct: 617 QQLAVDEKYVANDLFLDRESQQIIMITGPNMSGKSALLRQTALVVLMAQMGSFVPASSAK 676
Query: 592 ISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFG 651
I +VD+IFTRVGA+D+ +G STFM+EM ETA+++ +E SLV++DE+GRGTST+DG
Sbjct: 677 IGIVDKIFTRVGASDNISQGASTFMVEMNETASILNNLSERSLVLLDEIGRGTSTYDGIS 736
Query: 652 MACSIARELASH-RQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPG 710
+A +I L H + TLFATH+HE+ +S +N V+ E +D ++ + + PG
Sbjct: 737 IAWAITEYLHQHSSKAKTLFATHYHELNEMSASFERIKNFNVAVKELKDTVLFIRTLSPG 796
Query: 711 SCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
S+G+H AKMAG P ++L++A ++K+ E S ++ +G
Sbjct: 797 GSAHSFGIHVAKMAGMPNEVLQKANSILKKLEKSHSSEQLTG 838
>gi|206972648|ref|ZP_03233590.1| DNA mismatch repair protein MutS [Bacillus cereus AH1134]
gi|365159455|ref|ZP_09355635.1| DNA mismatch repair protein mutS [Bacillus sp. 7_6_55CFAA_CT2]
gi|423412426|ref|ZP_17389546.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3O-2]
gi|423425907|ref|ZP_17402938.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3X2-2]
gi|423431789|ref|ZP_17408793.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4O-1]
gi|423503552|ref|ZP_17480144.1| DNA mismatch repair protein mutS [Bacillus cereus HD73]
gi|449090713|ref|YP_007423154.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|206732461|gb|EDZ49641.1| DNA mismatch repair protein MutS [Bacillus cereus AH1134]
gi|363625167|gb|EHL76212.1| DNA mismatch repair protein mutS [Bacillus sp. 7_6_55CFAA_CT2]
gi|401104494|gb|EJQ12471.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3O-2]
gi|401110654|gb|EJQ18553.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3X2-2]
gi|401116545|gb|EJQ24383.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4O-1]
gi|402458906|gb|EJV90646.1| DNA mismatch repair protein mutS [Bacillus cereus HD73]
gi|449024470|gb|AGE79633.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 890
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLNQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 790
>gi|88195005|ref|YP_499805.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|87202563|gb|ABD30373.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus NCTC 8325]
Length = 840
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 212 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 263
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 264 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 322
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 323 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 382
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 383 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 442
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 443 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 497
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 498 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 553
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 554 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 612
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 613 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 672
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 673 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 732
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 733 KLADLPEKVISRAQVILSEFEASAGKKS 760
>gi|420261475|ref|ZP_14764119.1| DNA mismatch repair protein HexA [Enterococcus sp. C1]
gi|394771409|gb|EJF51170.1| DNA mismatch repair protein HexA [Enterococcus sp. C1]
Length = 850
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 213/750 (28%), Positives = 337/750 (44%), Gaps = 84/750 (11%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G A VDL T + ++ D++ N A + K C E L + ++ +
Sbjct: 141 GFAYVDLSTGELKAAQLEDEEAVVNEAAALQTKEVVLCSEIPESLQTMLTNRLNVVFSKQ 200
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ + +F E L Q + ++V +LL + +T RSL + + +
Sbjct: 201 ETLEENAEFQFLTEPLSQGLEKVV--------TGKLLSYLAITQK----RSLAHIQQAVE 248
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + H++ Y + + S+ +QG+ LL +LD +T G R
Sbjct: 249 YQPD------HALKMDHYSKFNLELTQSIRTGKKQGT--------LLWLLDETKTAMGGR 294
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL QW+ +PL I R V L+++ R +L E AL + DM+ L R+
Sbjct: 295 LLKQWLDRPLIQPKKITARQEMVQSLLDSFFERADLQE-ALTKVYDMERLVGRVAFGNVN 353
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL--------KMMDR---- 377
+D ++ + Q+P ++ L+Q + N +L L L +D
Sbjct: 354 GRDLLQLKSSLEQVP----LIAQLLQGINRGEWNDLLLELTPLDDLVALIEAAIDEDAPL 409
Query: 378 --------KDAVMDKMKEY-------------LESTARRLNLVADKTIKLENSPQGFAYR 416
KD ++ EY LE+ R+ V + + N G+
Sbjct: 410 QITEGNIIKDGFHQQLDEYRTAMRNGKQWLAELEANERQATGVKNLKVGF-NRVFGYYIE 468
Query: 417 IT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQREYETHQQSIVEE 470
IT L N RY T+ RF L T + +++ EY + EE
Sbjct: 469 ITKANLVNLDTSRYERKQTLANAERFISPELKKLETLILEAEEKSVDLEYRLFL-DVREE 527
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
V L +L+ ++ DVL SF A+ YVRP + S++ RHP
Sbjct: 528 V----KKSITRLQKLAKAVSAVDVLQSF--ATVSERYQYVRPTVAKKRAVSII--DGRHP 579
Query: 531 IVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
+VE + G YIPN + E L+TGPNM GKSTY+R + V +AQIGCFVP S
Sbjct: 580 VVEKVLGHQEYIPNSIVMDE-ETEILLITGPNMSGKSTYMRQFALLVIMAQIGCFVPAQS 638
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DELGRGT+T+DG
Sbjct: 639 AEMPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRHATPNSLILFDELGRGTATYDG 698
Query: 650 FGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
+A +I + TLF+TH+HE+ +L + RNV V A+E+E +V L+++
Sbjct: 699 MALAQAIIEYIHKEVHAKTLFSTHYHELTVLDEELAHLRNVHVGAVEKEGEVVFLHKMME 758
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEG 769
G KSYG+H AK+AG P +L++A ++K E T P +++ F V
Sbjct: 759 GPADKSYGIHVAKIAGLPSALLQRAATILKALEEHEPTVQPKPVVEESQQLSLFSEVSTE 818
Query: 770 EYQMFDFLQQ--CLSLSKQKDTNRILHLQE 797
E + D L++ L ++ N + LQ+
Sbjct: 819 EIGVIDQLKKLNLLEMTPMDALNTLYELQK 848
>gi|417891937|ref|ZP_12535994.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21200]
gi|418306676|ref|ZP_12918452.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21194]
gi|341851223|gb|EGS92152.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21200]
gi|365246424|gb|EHM86977.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21194]
Length = 872
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S LVQ + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PND E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNDCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|228959976|ref|ZP_04121641.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229111242|ref|ZP_04240796.1| DNA mismatch repair protein mutS [Bacillus cereus Rock1-15]
gi|229129046|ref|ZP_04258019.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-Cer4]
gi|228654283|gb|EEL10148.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-Cer4]
gi|228672236|gb|EEL27526.1| DNA mismatch repair protein mutS [Bacillus cereus Rock1-15]
gi|228799719|gb|EEM46671.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 884
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 784
>gi|424785128|ref|ZP_18211931.1| DNA mismatch repair protein MutS [Staphylococcus aureus CN79]
gi|421956538|gb|EKU08867.1| DNA mismatch repair protein MutS [Staphylococcus aureus CN79]
Length = 840
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 212 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 263
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 264 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 322
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 323 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 382
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 383 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 442
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 443 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 497
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 498 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 553
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 554 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 612
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 613 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 672
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 673 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 732
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 733 KLADLPEKVISRAQVILSEFEASAGKKS 760
>gi|386388965|ref|ZP_10073807.1| DNA mismatch repair protein MutS [Haemophilus paraphrohaemolyticus
HK411]
gi|385696699|gb|EIG27170.1| DNA mismatch repair protein MutS [Haemophilus paraphrohaemolyticus
HK411]
Length = 868
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 199/688 (28%), Positives = 326/688 (47%), Gaps = 62/688 (9%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
T +A +D+ + +F + E+P + S + + L PAE L IL+
Sbjct: 141 GTFAIATLDMASGRFLISELPSQEALS---------AELQRLQPAEILYAEDFAYAGILN 191
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
K + R EF +Q +NR +F L + A CL ++Y +
Sbjct: 192 NYK-GLRRRPVWEFELTTAIQLLNR--QFGTQSLAGFGVEKATTALCAAGCL---LHYAQ 245
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ SIH S+ V + +A +L + + + T ++L +LD+C TP
Sbjct: 246 ETQRTALPHINSIHLSQNSETVLLDAATRRNLEL---TQNLAGGTENTLASVLDKCVTPM 302
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL +W+ QP++D+ + ER + L +E L + AL+ + DM+ + R+ +
Sbjct: 303 GSRLLKRWIHQPIRDVKKLKERQDIIESL-QKSEQIAPLQQ-ALQNVGDMERILARVALR 360
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK----MMDRK---- 378
A +D R+ + Q+P++ + + L A NL+ +L+ L ++ R
Sbjct: 361 SARPRDFTRLRSALQQIPEIKQLSQQL-----APNLDHLLAQLADFDELADLLKRSIIDN 415
Query: 379 ---------------DAVMDKMK-------EYLESTA-RRLNLVADKTIKLE-NSPQGFA 414
A +D+ + +YLE R T+K+ N+ G+
Sbjct: 416 PPQLIRDGGVIAEGYSAELDEWRSLSAGATQYLEDLEIREREATGIDTLKIGFNAVHGYY 475
Query: 415 YRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
+I+ + Y T++ R+ L T + + ++ + +E+ +
Sbjct: 476 IQISQGQAHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDL 535
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVEL 534
L + VLA+ DVLV+ +A YVRP +P + + + RHP+VE
Sbjct: 536 LMPRLGELQLAAMVLAELDVLVN--LAERAENLGYVRPTFRPQRI--INIKEGRHPVVER 591
Query: 535 QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISV 594
+I N VY + + +VTGPNMGGKSTY+R I + +A IG FVP +SA I V
Sbjct: 592 VIKDPFIANPVYLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPAESAEIGV 650
Query: 595 VDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMAC 654
+D+IFTR+GA+D G STFM+EM E A ++ + TENSLV+IDE+GRGTST+DG +A
Sbjct: 651 IDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAW 710
Query: 655 SIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVK 714
+ A LA Q TLFATH+ E+ L + NV + A E D + ++ V+ G+ K
Sbjct: 711 ACAEWLAKKTQSLTLFATHYFELTSLPNQLKGVANVHLDAREHNDTIAFMHCVQEGAASK 770
Query: 715 SYGVHCAKMAGYPEDMLEQARDLMKEYE 742
SYG+ A +AG P+ ++ A+ + E
Sbjct: 771 SYGLAVAALAGVPKPVIALAKQRLAHLE 798
>gi|118478990|ref|YP_896141.1| DNA mismatch repair protein MutS [Bacillus thuringiensis str. Al
Hakam]
gi|166232115|sp|A0RHE1.1|MUTS_BACAH RecName: Full=DNA mismatch repair protein MutS
gi|118418215|gb|ABK86634.1| DNA mismatch repair protein MutS [Bacillus thuringiensis str. Al
Hakam]
Length = 890
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TT 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKE 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|257866605|ref|ZP_05646258.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC30]
gi|257872879|ref|ZP_05652532.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC10]
gi|257800563|gb|EEV29591.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC30]
gi|257807043|gb|EEV35865.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC10]
Length = 853
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 212/750 (28%), Positives = 337/750 (44%), Gaps = 84/750 (11%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G A VDL T + ++ D++ N A + K C E L + ++ +
Sbjct: 144 GFAYVDLSTGELKAAQLEDEEAVVNEAAALQTKEVVLCSEIPESLQTTLTNRLNVVFSKQ 203
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ + +F E L Q++ ++V +LL + +T RSL + + +
Sbjct: 204 ETLEENAEFQFLTEPLSQELEKVV--------TGKLLSYLAITQK----RSLAHIQQAVE 251
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + H++ Y + + S+ +QG+ LL +LD +T G R
Sbjct: 252 YQPD------HALKMDHYSKFNLELTQSIRTGKKQGT--------LLWLLDETKTAMGGR 297
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL QW+ +PL I R V L+++ R +L E AL + DM+ L R+
Sbjct: 298 LLKQWLDRPLIQPKKITARQEMVQSLLDSFFERADLQE-ALTKVYDMERLVGRVAFGNVN 356
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL--------KMMDR---- 377
+D ++ + Q+P ++ L+Q + N +L L L +D
Sbjct: 357 GRDLLQLKSSLEQVP----LIAQLLQGINRGEWNDLLLELTPLDDLVALIEASIDEDAPL 412
Query: 378 --------KDAVMDKMKEY-------------LESTARRLNLVADKTIKLENSPQGFAYR 416
KD ++ EY LE+ R+ V + + N G+
Sbjct: 413 QITEGNIIKDGFHQQLDEYRTAMRNGKQWLAELEANERQATGVKNLKVGF-NRVFGYYIE 471
Query: 417 IT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQREYETHQQSIVEE 470
IT L N RY T+ RF L T + +++ EY + EE
Sbjct: 472 ITKANLLNLDTSRYERKQTLANAERFISPELKKLETLILEAEEKSVDLEYRLFL-DVREE 530
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
V L +L+ ++ DVL SF A+ YVRP + S++ RHP
Sbjct: 531 V----KKSITRLQKLAKAVSAVDVLQSF--ATVSERYQYVRPTVAKKRAVSII--DGRHP 582
Query: 531 IVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
+VE + G YIPN + E L+TGPNM GKSTY+R + V +AQIGCFVP S
Sbjct: 583 VVEKVLGHQEYIPNSIVMDE-ETEILLITGPNMSGKSTYMRQFALLVIMAQIGCFVPAQS 641
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A + + D+IFTR+GA+D G STFM+EM E ++ T N L++ DELGRGT+T+DG
Sbjct: 642 AEMPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRHATPNGLILFDELGRGTATYDG 701
Query: 650 FGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
+A +I + TLF+TH+HE+ +L + RNV V A+E+E +V L+++
Sbjct: 702 MALAQAIIEYIHKEVHAKTLFSTHYHELTVLDEELAHLRNVHVGAVEKEGEVVFLHKMME 761
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEG 769
G KSYG+H AK+AG P +L++A ++K E T P +++ F V
Sbjct: 762 GPADKSYGIHVAKIAGLPSALLQRAATILKALEEHEPTVQPKPVVEESQQLSLFSEVSTE 821
Query: 770 EYQMFDFLQQ--CLSLSKQKDTNRILHLQE 797
E + D L++ L ++ N + LQ+
Sbjct: 822 EIGVIDQLKKLNLLEMTPMDALNTLYELQK 851
>gi|385813211|ref|YP_005849604.1| DNA mismatch repair protein mutS [Lactobacillus helveticus H10]
gi|323465930|gb|ADX69617.1| DNA mismatch repair protein mutS [Lactobacillus helveticus H10]
Length = 858
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 284/583 (48%), Gaps = 55/583 (9%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 217 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVAS--AKTGKKMGSLFW 273
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 274 VLDKTHTAMGGRLLKQWLARPLLNVDIINHREEMVQALLDGYFTRENTID-ALKGVYDLE 332
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNVE-----ASNLNT 364
L RI ++ ++ + +P ++ +L + ++ A ++T
Sbjct: 333 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSDVLTDFAKKIDPLKGVAELIST 392
Query: 365 ILSSLQSL-------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLEN 408
L L K +DR M+ K++L E+ R+ + + +
Sbjct: 393 TLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNK 452
Query: 409 SPQGFAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREY 460
F Y I + N DRYT T+ R+ L Q ++ EY
Sbjct: 453 V---FGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEY 509
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ Q + +EV Y L +L + LA DV F A+ Y RP
Sbjct: 510 DLFVQ-LRDEV----KKYIPALQKLGNQLAALDVYCGF--ATVAEQNNYCRPSFHTDSQD 562
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
V+N RHP+VE + SYIPNDV S F L+TGPNM GKSTY+R + + +A
Sbjct: 563 IDVVN-GRHPVVEKVMTAGSYIPNDVKMDSATNIF-LITGPNMSGKSTYMRQMALIAIMA 620
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+G FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE
Sbjct: 621 QVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDE 680
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+T+DG +A +I + L LFATH+HE+ L + +N+ V A E+
Sbjct: 681 IGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTSLDETLDYLKNIHVGATEENG 740
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LV L+++ PG +SYG+H A++AG P +L +A L+K E
Sbjct: 741 KLVFLHKILPGPADQSYGIHVAQLAGLPCAVLREATKLLKRLE 783
>gi|253733467|ref|ZP_04867632.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|417898431|ref|ZP_12542351.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21259]
gi|253728521|gb|EES97250.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|341848464|gb|EGS89627.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21259]
Length = 872
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|325567292|ref|ZP_08143959.1| DNA mismatch repair protein HexA [Enterococcus casseliflavus ATCC
12755]
gi|325158725|gb|EGC70871.1| DNA mismatch repair protein HexA [Enterococcus casseliflavus ATCC
12755]
Length = 853
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 213/750 (28%), Positives = 337/750 (44%), Gaps = 84/750 (11%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G A VDL T + ++ D++ N A + K C E L + ++ +
Sbjct: 144 GFAYVDLSTGELKAAQLEDEEAVVNEAAALQTKEVVLCSEIPESLQTMLTNRLNVVFSKQ 203
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ + +F E L Q + ++V +LL + +T RSL + + +
Sbjct: 204 ETLEENAEFQFLTEPLSQGLEKVV--------TGKLLSYLAITQK----RSLAHIQQAVE 251
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + H++ Y + + S+ +QG+ LL +LD +T G R
Sbjct: 252 YQPD------HALKMDHYSKFNLELTQSIRTGKKQGT--------LLWLLDETKTAMGGR 297
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL QW+ +PL I R V L+++ R +L E AL + DM+ L R+
Sbjct: 298 LLKQWLDRPLIQPKKITARQEMVQSLLDSFFERADLQE-ALTKVYDMERLVGRVAFGNVN 356
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL--------KMMDR---- 377
+D ++ + Q+P ++ L+Q + N +L L L +D
Sbjct: 357 GRDLLQLKSSLEQVP----LIAQLLQGINRGEWNDLLLELTPLDDLVALIEAAIDEDAPL 412
Query: 378 --------KDAVMDKMKEY-------------LESTARRLNLVADKTIKLENSPQGFAYR 416
KD ++ EY LE+ R+ V + + N G+
Sbjct: 413 QITEGNIIKDGFHQQLDEYRTAMRNGKQWLAELEANERQATGVKNLKVGF-NRVFGYYIE 471
Query: 417 IT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQREYETHQQSIVEE 470
IT L N RY T+ RF L T + +++ EY + EE
Sbjct: 472 ITKANLVNLDTSRYERKQTLANAERFISPELKKLETLILEAEEKSVDLEYRLFL-DVREE 530
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
V L +L+ ++ DVL SF A+ YVRP + S++ RHP
Sbjct: 531 V----KKSITRLQKLAKAVSAVDVLQSF--ATVSERYQYVRPTVAKKRAVSII--DGRHP 582
Query: 531 IVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
+VE + G YIPN + E L+TGPNM GKSTY+R + V +AQIGCFVP S
Sbjct: 583 VVEKVLGHQEYIPNSIVMDE-ETEILLITGPNMSGKSTYMRQFALLVIMAQIGCFVPAQS 641
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A + + D+IFTR+GA+D G STFM+EM E ++ T NSL++ DELGRGT+T+DG
Sbjct: 642 AEMPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRHATPNSLILFDELGRGTATYDG 701
Query: 650 FGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
+A +I + TLF+TH+HE+ +L + RNV V A+E+E +V L+++
Sbjct: 702 MALAQAIIEYIHKEVHAKTLFSTHYHELTVLDEELAHLRNVHVGAVEKEGEVVFLHKMME 761
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEG 769
G KSYG+H AK+AG P +L++A ++K E T P +++ F V
Sbjct: 762 GPADKSYGIHVAKIAGLPSALLQRAATILKALEEHEPTVQPKPVVEESQQLSLFSEVSTE 821
Query: 770 EYQMFDFLQQ--CLSLSKQKDTNRILHLQE 797
E + D L++ L ++ N + LQ+
Sbjct: 822 EIGVIDQLKKLNLLEMTPMDALNTLYELQK 851
>gi|239636983|ref|ZP_04677977.1| DNA mismatch repair protein MutS [Staphylococcus warneri L37603]
gi|239597333|gb|EEQ79836.1| DNA mismatch repair protein MutS [Staphylococcus warneri L37603]
Length = 871
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 277/536 (51%), Gaps = 53/536 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL ++D +TP G R L QW+ +PL I ER V+ +N+ R L Y L +
Sbjct: 272 TLLWLMDETKTPMGARRLKQWIDRPLIYKQQIEERLNIVDEFINHFIERDTLRNY-LNQV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL-----ESLVQNVEASNLNTILSS 368
D++ L R+ +D ++ +S++P + +L +++ Q L+ +L
Sbjct: 331 YDIERLVGRVSYGNVNARDLIQLKHSISEIPNIKQLLSQLDSDTITQFDALEPLDDLLEV 390
Query: 369 LQSLKMMDRKDAVMD----------KMKEYLESTARRLNLVAD-----------KTIKLE 407
L++ + + +V D ++ EYLE++ + +A+ K++K+
Sbjct: 391 LENSLVEEPPISVKDGGLFKSGFNHQLDEYLEASRNGKSWLAELQAKERERTGIKSLKIS 450
Query: 408 -NSPQGFAYRITMKLNNSIDDR---YTILDTVRGGVRFQDDRLATA-----NTQYQAIQR 458
N G+ IT D Y T+ RF D L + +AI+
Sbjct: 451 FNKVFGYFIEITRANLQGFDPSQFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAIEL 510
Query: 459 EYETH---QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMK 515
EY+ ++ I E YT+ L + + ++++ D L SF A YVRP
Sbjct: 511 EYQLFVKLREHIKE--------YTERLQKQAKIISELDCLQSF--AEIAQKYNYVRPHFS 560
Query: 516 PMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 574
T L L RHP+VE + Y+PND + + L+TGPNM GKSTY+R I +
Sbjct: 561 DDKT--LKLKNSRHPVVERVMDYNDYVPNDCALDNDTFIY-LITGPNMSGKSTYMRQIAI 617
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
+AQ+G +VPC+SAT+ + DQIFTR+GAAD G STFM+EM E + TE+SL
Sbjct: 618 ISIMAQMGAYVPCESATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSL 677
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
+I DE+GRGTST+DG +A ++ +A TLF+TH+HE+ L +++P +NV V+A
Sbjct: 678 IIFDEIGRGTSTYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTTLDQLLPCLKNVHVAA 737
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
E + L+ L++VK G+ SYG+ AK+A P++++++A+ ++ ++E D+ P
Sbjct: 738 NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPDEVIQRAQVILNDFEQKSDSPEP 793
>gi|196044558|ref|ZP_03111793.1| DNA mismatch repair protein MutS [Bacillus cereus 03BB108]
gi|225865750|ref|YP_002751128.1| DNA mismatch repair protein MutS [Bacillus cereus 03BB102]
gi|376267662|ref|YP_005120374.1| DNA mismatch repair protein MutS [Bacillus cereus F837/76]
gi|254766614|sp|C1ENZ3.1|MUTS_BACC3 RecName: Full=DNA mismatch repair protein MutS
gi|196024593|gb|EDX63265.1| DNA mismatch repair protein MutS [Bacillus cereus 03BB108]
gi|225787987|gb|ACO28204.1| DNA mismatch repair protein MutS [Bacillus cereus 03BB102]
gi|364513462|gb|AEW56861.1| DNA mismatch repair protein MutS [Bacillus cereus F837/76]
Length = 890
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TT 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKE 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|385781523|ref|YP_005757694.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 11819-97]
gi|418572156|ref|ZP_13136368.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21333]
gi|364522512|gb|AEW65262.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 11819-97]
gi|371984640|gb|EHP01749.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21333]
Length = 872
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|422809484|ref|ZP_16857895.1| DNA mismatch repair protein MutS [Listeria monocytogenes FSL
J1-208]
gi|378753098|gb|EHY63683.1| DNA mismatch repair protein MutS [Listeria monocytogenes FSL
J1-208]
Length = 860
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 278/527 (52%), Gaps = 52/527 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G R+L QW+ +PL D + I+ER V+ L+ N R+ L E L+ +
Sbjct: 278 TLLWLLDNTQTAMGGRMLKQWIDRPLIDRNKIIERQNDVSELMANFFERLELVE-NLKNV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------ESLVQ 355
D++ LA R+ +D ++ + Q+P++ + L E L +
Sbjct: 337 YDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMNSKSLTELANQLDPCEELTE 396
Query: 356 NVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVAD-----------KTI 404
+E + +++ S++ ++ KD ++ Y +++ +A+ KT+
Sbjct: 397 KLEEAIMDSAPISIREGGII--KDGYNSQLDTYRDASRNGKTWIAELERKERELTGIKTM 454
Query: 405 KLENSPQGFAYRITMKLNNS---IDDRYTILDTVRGGVRFQDDRLATA-----NTQYQAI 456
K+ + F Y I + N+ + RY T+ R+ L + + +++
Sbjct: 455 KV-GFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDAEEKSM 513
Query: 457 QREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP 516
+ EY+ + EV + Y + L +L+ +++ D L SF A ++RP +
Sbjct: 514 ELEYQ-----LFTEVRELVKDYIERLQKLAKSVSEIDCLQSF--ADISEKNHFIRPTLSE 566
Query: 517 MGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
GSL + Q RHP+VE + G SY+ ND L+TGPNM GKSTY+R + ++
Sbjct: 567 --DGSLHVKQGRHPVVEKVMGAQSYVANDCDLDRNR-EILLITGPNMSGKSTYMRQVALT 623
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
AQ+GCFVP + AT+ + DQIFTR+GAAD G STFM+EM E I T++SL+
Sbjct: 624 AICAQVGCFVPAEEATLPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSLI 683
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + + TLF+TH+HE+ L + + +N+ VSA+
Sbjct: 684 LFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELHGLQNIHVSAV 743
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
E+ +V L+++K G KSYG+H A++A P+ ++E+A ++++ E
Sbjct: 744 EENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLE 790
>gi|254525938|ref|ZP_05137990.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str. MIT
9202]
gi|221537362|gb|EEE39815.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str. MIT
9202]
Length = 913
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 178/596 (29%), Positives = 298/596 (50%), Gaps = 51/596 (8%)
Query: 191 LTTATHCLRSLINYLELMN--NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV---LPQQG 245
L AT L L+NYLE +N N D + I S+D+ + + ++ L +
Sbjct: 315 LNNATRSLGGLLNYLEKINPSNLDKDSSVKI-SLDFPQIQFGHNKLIIDYQTQKNLEIKN 373
Query: 246 STSAQTY-DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMN 304
+ Y SLL +DR T G R L +W+ PL +++ I +R + + + + R++
Sbjct: 374 TQRENNYVGSLLWSIDRTYTCMGARCLRRWIDSPLLNVNEIYKRQNIITNFIESKQLRID 433
Query: 305 LHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----------V 354
LR + D++ LA R A +D + EG+ +LP+L SI+E +
Sbjct: 434 TQNL-LRAMGDLERLAGRACAGHASPRDLIAIAEGLKKLPRLKSIIELFRYDLPDWTDQL 492
Query: 355 QNVEASNLNTILSSLQSLKMM--------------DRKDAVMDKMKEYLESTARRLN--- 397
+N++ L L+ + S K++ D D ++D ++ ++ + LN
Sbjct: 493 KNIDEGLLE--LADIISFKLIENPPLSISEGGMIHDGVDNILDGLRNLMDDYSEWLNKEE 550
Query: 398 LVADKTIKLENSP----QGFAYRITMKLN--NSIDDRYTILDTVRGGVRFQDDRLATANT 451
L K K+ N + F Y I++ + N + T+ R+ +
Sbjct: 551 LKEKKISKISNLKIQFHKNFGYYISINKSKVNLAPQHWIKRQTLTNEERYITSEIKNKEN 610
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
+ I+ + + I E+ I A T+ + ++ +A D L+ SI T +++
Sbjct: 611 KIFQIKSRASSREYEIFCELRNIVAEKTKQIRSIAKSIASLDALLGLSI--TSVENNFIK 668
Query: 512 PCMKPMG----TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
P + P+ S + R+PIVE L +I ND+ F+ + ++TGPN GKS
Sbjct: 669 PSLIPINDSTTKNSTKIIAGRNPIVEQLLNDKQFIANDISFEENQ-KLIILTGPNASGKS 727
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
+IR +G+ LAQIG FVP ++A I + D+IFTR+GA D Q G STFM+EM ETA+++
Sbjct: 728 CFIRQLGLIQILAQIGSFVPANNAEIKIADRIFTRIGAVDDQSSGQSTFMVEMSETASIL 787
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T +SLV++DE+GRGTSTFDG +A S++ LA Q T+FATH+HE+ L
Sbjct: 788 NQATSSSLVLLDEIGRGTSTFDGLSIAWSVSEYLAKIIQCNTIFATHYHELNYLKNSNKN 847
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+N QV + D L+ +++ G KSYG+ AK+AG P++++E+A+ ++ E
Sbjct: 848 IQNFQVLVEQNNDQLIFSHRIVKGGSNKSYGIEAAKLAGVPKEVIEKAKSVLNSLE 903
>gi|414155132|ref|ZP_11411447.1| DNA mismatch repair protein mutS [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453182|emb|CCO09351.1| DNA mismatch repair protein mutS [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 870
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 257/522 (49%), Gaps = 34/522 (6%)
Query: 251 TYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYAL 310
T +LLG+LD+ RT G RLL W++QPL +L I R AV LV+ R L AL
Sbjct: 288 TKGTLLGVLDKTRTAMGGRLLKSWLEQPLINLSDIQARLDAVEELVHALLLREELAG-AL 346
Query: 311 RGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE------------------- 351
+ + D++ L R A +D + + +LP L L+
Sbjct: 347 KQIYDLERLTARAAYGTANGRDLTALLGSLEKLPSLYQALQQSRSSLLRSISRQFDTLDD 406
Query: 352 -------SLVQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLES-TARRLNLVADKT 403
SL N AS + L +DR A K +L AR K
Sbjct: 407 LRDLLSASLADNPPASLRDGGLIKDGYHPEVDRLRAAARDGKAWLAGLEAREKEKTGIKN 466
Query: 404 IKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYET 462
+K+ N G+ +T +++ D Y T+ R+ L +
Sbjct: 467 LKVGFNKVFGYYLEVTKANLHAVPDYYQRRQTLANAERYITPELKEYESMILGAADRLVE 526
Query: 463 HQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSL 522
+ + E+ G A Q + + + ++AQ DVLVS + +T + YV+P + G +
Sbjct: 527 LEYDLFTEIRGRVADQVQRIQKTAALIAQIDVLVSLAEVATA--RGYVKPRLSDEGV--I 582
Query: 523 VLNQCRHPIVELQ-GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 581
+ + RHP+VE+ G ++PND + L+TGPNMGGKSTY R + + V LAQ+
Sbjct: 583 EITEGRHPVVEMTLGPGRFVPNDTCLDTANRRLCLITGPNMGGKSTYQRQVALIVLLAQV 642
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
G FVP A I +VD+IF RVGA+D G STFM+EM ET ++ T SLVIIDELG
Sbjct: 643 GSFVPASMAKIGIVDRIFARVGASDDLSSGQSTFMVEMFETRQILDNATARSLVIIDELG 702
Query: 642 RGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNL 701
RGTS +G +A ++ L TLF+TH+HE+A L ++P +N + EQ D +
Sbjct: 703 RGTSNLEGMAIAQAVIEYLHDVVGCRTLFSTHYHELAELEGLLPGLKNYATAVQEQGDQV 762
Query: 702 VLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEY 743
V L +V KSYGVHCA++AG P ++E+A +L+++ EY
Sbjct: 763 VFLRKVVRDKASKSYGVHCARLAGLPGHVIERAAELVQQLEY 804
>gi|423318198|ref|ZP_17296095.1| DNA mismatch repair protein mutS [Lactobacillus crispatus FB049-03]
gi|423320486|ref|ZP_17298358.1| DNA mismatch repair protein mutS [Lactobacillus crispatus FB077-07]
gi|405596687|gb|EKB70020.1| DNA mismatch repair protein mutS [Lactobacillus crispatus FB049-03]
gi|405605090|gb|EKB78157.1| DNA mismatch repair protein mutS [Lactobacillus crispatus FB077-07]
Length = 865
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 295/610 (48%), Gaps = 49/610 (8%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 224 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVAS--AKTGKKMGSLFW 280
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 281 VLDNTHTAMGGRLLKQWLARPLLNMDEINHREEMVQALLDGYFTRENAVD-ALKGVYDLE 339
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------EASNLNTILSSLQS 371
L RI ++ ++ + +P ++ LE ++ + L + + S
Sbjct: 340 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALEQSDSDILVDFAKKIDPLKGVAEMITS 399
Query: 372 LKMMDRK-------------DAVMDKMKEYLESTARRL-NLVADKTIK--LENSPQG--- 412
+ D D +D+ ++ + + + L + AD+ K ++N G
Sbjct: 400 TIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLKVGYNK 459
Query: 413 -FAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREYETH 463
F Y I + N DRYT T+ R+ L Q ++ EY+
Sbjct: 460 VFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLF 519
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
+ + E+V Y L +L LA DV F A+ Y RP V
Sbjct: 520 VK-LREDV----KKYIPALQKLGGQLAALDVYCGF--ATVAEQNNYCRPTFHADNQDINV 572
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
N RHP+VE + SYIPNDV G + L+TGPNM GKSTY+R + + +AQ+G
Sbjct: 573 TN-GRHPVVEKVMTAGSYIPNDVKMDEG-TNIYLITGPNMSGKSTYMRQMALIAIMAQVG 630
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE+GR
Sbjct: 631 SFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVLFDEIGR 690
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GT+T+DG +A +I + L LFATH+HE+ ++ + +N+ V A E+ L+
Sbjct: 691 GTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTVMDETLDHLKNIHVGATEENGKLI 750
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNNREEEY 762
L+++ PG +SYG+H A++AG P ++L +A L+K E P + + E
Sbjct: 751 FLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLKRLEAQGSELAPVSQQLDLFAEPV 810
Query: 763 FKTVQEGEYQ 772
+V+E E Q
Sbjct: 811 ENSVEETETQ 820
>gi|291536168|emb|CBL09280.1| DNA mismatch repair protein MutS [Roseburia intestinalis M50/1]
Length = 853
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 202/719 (28%), Positives = 346/719 (48%), Gaps = 87/719 (12%)
Query: 69 SHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL 128
++I+C++ L + G+++ D+ T +++ E+ D L I + +P E +
Sbjct: 144 NYIMCIV--------YLADKYGISLADISTGDYFVTEV---DTERKLIDEINKFAPSEII 192
Query: 129 LPAEY------LNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN 182
+ L+D KN++ + + + FS+E + F L+
Sbjct: 193 CNESFYMSGVDLSDMKNRL-------GIAVYSLEAWYFSDETAENTLKE--HFKVQSLEG 243
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
L C T A +L+ YL D N +IH KY+ + S+ +L ++
Sbjct: 244 LGLSDYACGTIAAG---ALLRYLYETQKNDLGNLSAIHPYSTGKYMIIDSSTRRNLELV- 299
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ Q SLL +LD+ +T G R L +++QPL D I R A+ L ++ R
Sbjct: 300 -ETLREKQKRGSLLWVLDKTKTAMGARTLRAYVEQPLIDKTEIELRQEAIGELNDHVITR 358
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE----SLVQNVE 358
L EY L + D++ L R+ + A +D +S LP + S+L+ +L++N++
Sbjct: 359 EELREY-LNPIYDLERLITRVTYRTANPRDLIAFKNSISMLPPIKSLLDEFDGALLKNIQ 417
Query: 359 ASNLNTI--LSSLQSLKMMDR-----------KDAVMDKMKEY-------------LEST 392
++++ + L SL +M+ K+ + + +Y LE+
Sbjct: 418 -NDIDAMEELCSLVDRSIMEEPPISVREGGLIKEGYNEDVDKYRNAKTEGKTWLAELEAK 476
Query: 393 ARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLA----- 447
R + + IK N G+ +T + + D +T T+ R+ L
Sbjct: 477 EREKTGIKNLKIKY-NKVFGYYLEVTNSYKDLVPDYFTRKQTLANAERYITPELKELEDM 535
Query: 448 TANTQYQAIQREYETH---QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+ + + EY+ + I EEV+ I + + +A DV VS ++ +
Sbjct: 536 ILGAEDKLVSLEYDLFCEVRNKIAEEVVRIQ--------RTAKAIANLDVFVSLAVVAD- 586
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
Y RP M +G + + RHP+VE + +I ND Y +G ++TGPNM
Sbjct: 587 -QNNYCRPKM--TNSGVIDIKGGRHPVVEKMITNDMFIDNDTYLDNGNNRIAIITGPNMA 643
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + V +AQIG FVP SA I +VD+IFTRVGA+D G STFM+EM E A
Sbjct: 644 GKSTYMRQAALIVLMAQIGSFVPATSAKIGIVDRIFTRVGASDDLASGQSTFMVEMNEVA 703
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR--QPFTLFATHFHEIALLS 681
+++ T NSL+++DE+GRGTSTFDG +A ++ +++ R TLFATH+HE+ L
Sbjct: 704 NILRNATSNSLLVLDEIGRGTSTFDGLSIAWAVVEHISNPRLLGAKTLFATHYHELTELE 763
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
+ N ++ E+ D++V L ++ G KSYG+ AK+AG P+ ++E+A+++++E
Sbjct: 764 GKLNNVHNYCIAVKEKGDDIVFLRKIVQGGADKSYGIQVAKLAGVPDSVIERAKEIVEE 822
>gi|290894466|ref|ZP_06557424.1| DNA mismatch repair protein MutS [Listeria monocytogenes FSL
J2-071]
gi|404407841|ref|YP_006690556.1| DNA mismatch repair protein [Listeria monocytogenes SLCC2376]
gi|290555981|gb|EFD89537.1| DNA mismatch repair protein MutS [Listeria monocytogenes FSL
J2-071]
gi|404241990|emb|CBY63390.1| DNA mismatch repair protein [Listeria monocytogenes SLCC2376]
Length = 860
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 278/527 (52%), Gaps = 52/527 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G R+L QW+ +PL D + I+ER V+ L+ N R+ L E L+ +
Sbjct: 278 TLLWLLDNTQTAMGGRMLKQWIDRPLIDRNKIIERQNDVSELMANFFERLELVE-NLKNV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------ESLVQ 355
D++ LA R+ +D ++ + Q+P++ + L E L +
Sbjct: 337 YDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMNSKSLTELANQLDPCEELTE 396
Query: 356 NVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVAD-----------KTI 404
+E + +++ S++ ++ KD ++ Y +++ +A+ KT+
Sbjct: 397 KLEEAIMDSAPISIREGGII--KDGYNSQLDTYRDASRNGKTWIAELERKERELTGIKTM 454
Query: 405 KLENSPQGFAYRITMKLNNS---IDDRYTILDTVRGGVRFQDDRLATA-----NTQYQAI 456
K+ + F Y I + N+ + RY T+ R+ L + + +++
Sbjct: 455 KV-GFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDAEEKSM 513
Query: 457 QREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP 516
+ EY+ + EV + Y + L +L+ +++ D L SF A ++RP +
Sbjct: 514 ELEYQ-----LFTEVRELVKDYIERLQKLAKSVSEIDCLQSF--ADISEKNHFIRPTLSE 566
Query: 517 MGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
GSL + Q RHP+VE + G SY+ ND L+TGPNM GKSTY+R + ++
Sbjct: 567 --DGSLHVKQGRHPVVEKVMGAQSYVANDCDLDRNR-EILLITGPNMSGKSTYMRQVALT 623
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
AQ+GCFVP + AT+ + DQIFTR+GAAD G STFM+EM E I T++SL+
Sbjct: 624 AICAQVGCFVPAEEATLPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSLI 683
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + + TLF+TH+HE+ L + + +N+ VSA+
Sbjct: 684 LFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELHGLQNIHVSAV 743
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
E+ +V L+++K G KSYG+H A++A P+ ++E+A ++++ E
Sbjct: 744 EENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLE 790
>gi|257413988|ref|ZP_04744892.2| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
gi|257201595|gb|EEU99879.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
Length = 900
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 202/719 (28%), Positives = 346/719 (48%), Gaps = 87/719 (12%)
Query: 69 SHILCVISEDKTLETVLTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECL 128
++I+C++ L + G+++ D+ T +++ E+ D L I + +P E +
Sbjct: 144 NYIMCIV--------YLADKYGISLADISTGDYFVTEV---DTERKLIDEINKFAPSEII 192
Query: 129 LPAEY------LNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKN 182
+ L+D KN++ + + + FS+E + F L+
Sbjct: 193 CNESFYMSGVDLSDMKNRL-------GIAVYSLEAWYFSDETAENTLKE--HFKVQSLEG 243
Query: 183 ARLLPEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
L C T A +L+ YL D N +IH KY+ + S+ +L ++
Sbjct: 244 LGLSDYACGTIAAG---ALLRYLYETQKNDLGNLSAIHPYSTGKYMIIDSSTRRNLELV- 299
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ Q SLL +LD+ +T G R L +++QPL D I R A+ L ++ R
Sbjct: 300 -ETLREKQKRGSLLWVLDKTKTAMGARTLRAYVEQPLIDKTEIELRQEAIGELNDHVITR 358
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILE----SLVQNVE 358
L EY L + D++ L R+ + A +D +S LP + S+L+ +L++N++
Sbjct: 359 EELREY-LNPIYDLERLITRVTYRTANPRDLIAFKNSISMLPPIKSLLDEFDGALLKNIQ 417
Query: 359 ASNLNTI--LSSLQSLKMMDR-----------KDAVMDKMKEY-------------LEST 392
++++ + L SL +M+ K+ + + +Y LE+
Sbjct: 418 -NDIDAMEELCSLVDRSIMEEPPISVREGGLIKEGYNEDVDKYRNAKTEGKTWLAELEAK 476
Query: 393 ARRLNLVADKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLA----- 447
R + + IK N G+ +T + + D +T T+ R+ L
Sbjct: 477 EREKTGIKNLKIKY-NKVFGYYLEVTNSYKDLVPDYFTRKQTLANAERYITPELKELEDM 535
Query: 448 TANTQYQAIQREYETH---QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+ + + EY+ + I EEV+ I + + +A DV VS ++ +
Sbjct: 536 ILGAEDKLVSLEYDLFCEVRNKIAEEVVRIQ--------RTAKAIANLDVFVSLAVVAD- 586
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
Y RP M +G + + RHP+VE + +I ND Y +G ++TGPNM
Sbjct: 587 -QNNYCRPKM--TNSGVIDIKGGRHPVVEKMITNDMFIDNDTYLDNGNNRIAIITGPNMA 643
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKSTY+R + V +AQIG FVP SA I +VD+IFTRVGA+D G STFM+EM E A
Sbjct: 644 GKSTYMRQAALIVLMAQIGSFVPATSAKIGIVDRIFTRVGASDDLASGQSTFMVEMNEVA 703
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHR--QPFTLFATHFHEIALLS 681
+++ T NSL+++DE+GRGTSTFDG +A ++ +++ R TLFATH+HE+ L
Sbjct: 704 NILRNATSNSLLVLDEIGRGTSTFDGLSIAWAVVEHISNPRLLGAKTLFATHYHELTELE 763
Query: 682 RVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKE 740
+ N ++ E+ D++V L ++ G KSYG+ AK+AG P+ ++E+A+++++E
Sbjct: 764 GKLNNVHNYCIAVKEKGDDIVFLRKIVQGGADKSYGIQVAKLAGVPDSVIERAKEIVEE 822
>gi|403514450|ref|YP_006655270.1| DNA mismatch repair protein MutS [Lactobacillus helveticus R0052]
gi|403079888|gb|AFR21466.1| DNA mismatch repair protein MutS [Lactobacillus helveticus R0052]
Length = 865
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 284/583 (48%), Gaps = 55/583 (9%)
Query: 199 RSLINYLELMNNEDNMNQFSI-HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
R L+ YL L + ++ I S + ++Y+ MS V ++L ++ + + + SL
Sbjct: 224 RQLVGYL-LSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVAS--AKTGKKMGSLFW 280
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+LD+ T G RLL QW+ +PL ++D I R V L++ R N + AL+G+ D++
Sbjct: 281 VLDKTHTAMGGRLLKQWLARPLLNVDIINHREEMVQALLDGYFTRENTID-ALKGVYDLE 339
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNVE-----ASNLNT 364
L RI ++ ++ + +P ++ +L + ++ A ++T
Sbjct: 340 RLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSDVLTDFAKKIDPLKGVAELIST 399
Query: 365 ILSSLQSL-------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLEN 408
L L K +DR M+ K++L E+ R+ + + +
Sbjct: 400 TLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNK 459
Query: 409 SPQGFAYRITMKLNNSID---DRYTILDTVRGGVRFQDDRLA-----TANTQYQAIQREY 460
F Y I + N DRYT T+ R+ L Q ++ EY
Sbjct: 460 V---FGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEY 516
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ Q + +EV Y L +L + LA DV F A+ Y RP
Sbjct: 517 DLFVQ-LRDEV----KKYIPALQKLGNQLAALDVYCGF--ATVAEQNNYCRPSFHTDSQD 569
Query: 521 SLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 579
V+N RHP+VE + SYIPNDV S F L+TGPNM GKSTY+R + + +A
Sbjct: 570 IDVVN-GRHPVVEKVMTAGSYIPNDVKMDSATNIF-LITGPNMSGKSTYMRQMALIAIMA 627
Query: 580 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 639
Q+G FVP DSA + + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE
Sbjct: 628 QVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDE 687
Query: 640 LGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQED 699
+GRGT+T+DG +A +I + L LFATH+HE+ L + +N+ V A E+
Sbjct: 688 IGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTSLDETLDYLKNIHVGATEENG 747
Query: 700 NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LV L+++ PG +SYG+H A++AG P +L +A L+K E
Sbjct: 748 KLVFLHKILPGPADQSYGIHVAQLAGLPCAVLREATKLLKRLE 790
>gi|418599668|ref|ZP_13163148.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21343]
gi|374396326|gb|EHQ67567.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21343]
Length = 872
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVINRAQVILSEFEASAGKKS 792
>gi|423558667|ref|ZP_17534969.1| DNA mismatch repair protein mutS [Bacillus cereus MC67]
gi|401191935|gb|EJQ98957.1| DNA mismatch repair protein mutS [Bacillus cereus MC67]
Length = 887
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/526 (32%), Positives = 273/526 (51%), Gaps = 50/526 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LENSPQGFAYRITMKLNNSI---DDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQ 457
+ + F Y I + N + RY T+ RF D L T + + +Q
Sbjct: 456 I-GYNRIFGYYIEVTKTNLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQ 514
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 515 LEYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--T 565
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 566 TKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVT 624
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 625 VMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLIL 684
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E
Sbjct: 685 FDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEENLDQLKNVHVSAIE 744
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ +V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 745 ENGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|374629540|ref|ZP_09701925.1| DNA mismatch repair protein MutS [Methanoplanus limicola DSM 2279]
gi|373907653|gb|EHQ35757.1| DNA mismatch repair protein MutS [Methanoplanus limicola DSM 2279]
Length = 944
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 204/712 (28%), Positives = 338/712 (47%), Gaps = 86/712 (12%)
Query: 87 NTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILD 146
N G+A +D+ T +F++ E D + Y++L + IV+ SP EC++ N V L+
Sbjct: 202 NEFGMAFLDVSTGEFFISECRDKNGYTSLNSEIVRYSPSECIIS----NKVPESAVRQLE 257
Query: 147 RNKVCMTGRKKNEFSEE---DLMQD---VNRLVRFDDSELKNARLLPEMCLTTATHCLRS 200
+ +T F E D +QD ++ L F + A CL+ A + +
Sbjct: 258 DKNILVTPYNTRAFDYETAKDFLQDYFSISSLEGFGCMGMDLAVCSAGACLSYACYTQKK 317
Query: 201 LINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILD 260
+ ++ ++ N + +I + +L +L + T SL G+L+
Sbjct: 318 DLGHIRKLSVRIPENNMVLDAI-----------TLRNLEILENIRNRGKDT--SLFGVLN 364
Query: 261 RCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL----PDM 316
+T G R+L +++ PL D + I RH AV + N+ R Y LRGL PD+
Sbjct: 365 DTKTSMGTRILKKFLTSPLIDKEEIERRHDAVEYFLTNSAVR-----YQLRGLLHKFPDI 419
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLP-----------KLISILESLVQNVEASNLNTI 365
+ +A RI AG +D + + ++P KL +++ V EA L +
Sbjct: 420 ERIAGRISYGNAGPRDLITLKNALIKIPEIKFLINPPSEKLPALISESVSGAEA--LTEV 477
Query: 366 LSSLQSL-----KMMDR-----KDAVMDKMKEYLESTARRLNLVAD-----------KTI 404
++S ++ R +D+ ++ E E+ N +A+ K++
Sbjct: 478 TELIESAINDEPPVLARTGGVIRDSYNSELDELRETAYSGKNWIAEFQQSERERTGIKSL 537
Query: 405 KLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQR 458
K+ N G+ +T + Y T+ G R+ Q+ +N + + +
Sbjct: 538 KVGYNKVFGYYIEVTKSNIGLVPPEYLRKQTMSNGERYTLPVLQEKESLISNAEEKLLAL 597
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
E E I+ + A + + S + DV +F S Y RP ++
Sbjct: 598 ELELFNNLILSLTKAVPA-----IQKTSGHIGLLDVYAAFGNVSDLYN--YKRPVIE--N 648
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 578
+G L+++ RHP+VE S++PND +S ++TG NM GKSTY+R + + +
Sbjct: 649 SGRLIISDGRHPVVERNMDSSFVPNDSGLESDGDQILIITGANMAGKSTYMRQVALITVM 708
Query: 579 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 638
AQ GCFVP A I +VD+IFTRVGA D G STFM+EM E A ++ T+ SLVI+D
Sbjct: 709 AQAGCFVPAAGAVIGIVDRIFTRVGAFDDLSSGQSTFMVEMLELANILNNITDKSLVILD 768
Query: 639 ELGRGTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
E+GRGTST DG+ +A ++ L S + P TLFATHFHE+ + + +N + E
Sbjct: 769 EIGRGTSTLDGYSIAKAVLEYLHSRSKSGPRTLFATHFHEMVGMEGELKRVKNYHFAVNE 828
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMK---EYEYSL 745
++V L ++ PG+ +SYG+H K+AG P +LE+A +++K E EYS+
Sbjct: 829 TGRDVVFLRKIIPGATDRSYGIHVVKLAGIPNRVLERASEILKSEQEREYSI 880
>gi|423611988|ref|ZP_17587849.1| DNA mismatch repair protein mutS [Bacillus cereus VD107]
gi|401246995|gb|EJR53339.1| DNA mismatch repair protein mutS [Bacillus cereus VD107]
Length = 889
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N AS L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYASRLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 790
>gi|47095354|ref|ZP_00232964.1| DNA mismatch repair protein MutS [Listeria monocytogenes str. 1/2a
F6854]
gi|254912078|ref|ZP_05262090.1| DNA mismatch repair protein MutS [Listeria monocytogenes J2818]
gi|254936405|ref|ZP_05268102.1| DNA mismatch repair protein MutS [Listeria monocytogenes F6900]
gi|386047055|ref|YP_005965387.1| DNA mismatch repair protein MutS [Listeria monocytogenes J0161]
gi|47016175|gb|EAL07098.1| DNA mismatch repair protein MutS [Listeria monocytogenes serotype
1/2a str. F6854]
gi|258608997|gb|EEW21605.1| DNA mismatch repair protein MutS [Listeria monocytogenes F6900]
gi|293590046|gb|EFF98380.1| DNA mismatch repair protein MutS [Listeria monocytogenes J2818]
gi|345534046|gb|AEO03487.1| DNA mismatch repair protein MutS [Listeria monocytogenes J0161]
Length = 860
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 278/527 (52%), Gaps = 52/527 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G R+L QW+ +PL D + I+ER V+ L+ N R+ L E L+ +
Sbjct: 278 TLLWLLDNTQTAMGGRMLKQWIDRPLIDRNKIIERQNDVSELMANFFERLELVE-NLKNV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------ESLVQ 355
D++ LA R+ +D ++ + Q+P++ + L E L +
Sbjct: 337 YDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMNSKSLTELANQLDPCEELTE 396
Query: 356 NVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVAD-----------KTI 404
+E + +++ S++ ++ KD ++ Y +++ +A+ KT+
Sbjct: 397 KLEEAIMDSAPISIREGGII--KDGYNSQLDTYRDASRNGKTWIAELERKERELTGIKTM 454
Query: 405 KLENSPQGFAYRITMKLNNS---IDDRYTILDTVRGGVRFQDDRLATA-----NTQYQAI 456
K+ + F Y I + N+ + RY T+ R+ L + + +++
Sbjct: 455 KV-GFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDAEEKSM 513
Query: 457 QREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKP 516
+ EY+ + EV + Y + L +L+ +++ D L SF A ++RP +
Sbjct: 514 ELEYQ-----LFTEVRELVKDYIERLQKLAKSVSEIDCLQSF--ADISEKNHFIRPTLSE 566
Query: 517 MGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
GSL + Q RHP+VE + G SY+ ND L+TGPNM GKSTY+R + ++
Sbjct: 567 --DGSLHVKQGRHPVVEKVMGAQSYVANDCDLDRNR-EILLITGPNMSGKSTYMRQVALT 623
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
AQ+GCFVP + AT+ + DQIFTR+GAAD G STFM+EM E I T++SL+
Sbjct: 624 AICAQVGCFVPAEEATLPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSLI 683
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + + TLF+TH+HE+ L + + +N+ VSA+
Sbjct: 684 LFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELHGLQNIHVSAV 743
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
E+ +V L+++K G KSYG+H A++A P+ ++E+A ++++ E
Sbjct: 744 EENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLE 790
>gi|229018965|ref|ZP_04175807.1| DNA mismatch repair protein mutS [Bacillus cereus AH1273]
gi|229025208|ref|ZP_04181632.1| DNA mismatch repair protein mutS [Bacillus cereus AH1272]
gi|228736141|gb|EEL86712.1| DNA mismatch repair protein mutS [Bacillus cereus AH1272]
gi|228742293|gb|EEL92451.1| DNA mismatch repair protein mutS [Bacillus cereus AH1273]
Length = 884
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLA 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYISKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPAKEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 799
Query: 758 RE 759
+E
Sbjct: 800 QE 801
>gi|157414251|ref|YP_001485117.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str. MIT
9215]
gi|157388826|gb|ABV51531.1| putative DNA mismatch repair protein [Prochlorococcus marinus str.
MIT 9215]
Length = 913
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 179/596 (30%), Positives = 298/596 (50%), Gaps = 51/596 (8%)
Query: 191 LTTATHCLRSLINYLELMN--NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV---LPQQG 245
LT AT L L+NYLE +N N D + I S+D+ + + ++ L +
Sbjct: 315 LTNATRSLGGLLNYLEKINPSNLDKDSSVKI-SLDFPQIQFGHNKLIIDYQTQKNLEIKN 373
Query: 246 STSAQTY-DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMN 304
+ Y SLL +DR T G R L +W+ PL ++ I +R + + + + R++
Sbjct: 374 TQRENNYVGSLLWSIDRTYTCMGARCLRRWIDSPLLSVNDIYKRQNIITNFIESKQLRID 433
Query: 305 LHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----------V 354
LR + D++ LA R A +D + EG+ +LP+L SI+E +
Sbjct: 434 TQNL-LRAMGDLERLAGRACAGHASPRDLIAIAEGLKKLPRLKSIIELFRYDLPDWTDQL 492
Query: 355 QNVEASNLNTILSSLQSLKMM--------------DRKDAVMDKMKEYLESTARRLN--- 397
+N++ L L+ + S K++ D D ++D ++ ++ + LN
Sbjct: 493 KNIDEGLLE--LADIISFKLIENPPLSISEGGMIHDGVDNILDGLRNLMDDYSEWLNKEE 550
Query: 398 LVADKTIKLENSP----QGFAYRITMKLN--NSIDDRYTILDTVRGGVRFQDDRLATANT 451
L K K+ N + F Y I++ + N + T+ R+ +
Sbjct: 551 LKERKISKISNLKIQFHKNFGYYISINKSKVNLAPQHWIKRQTLTNEERYITSEIKNKEN 610
Query: 452 QYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
+ I+ + + I E+ I A T+ + ++ +A D L+ SI T +++
Sbjct: 611 KIFQIKSRASSREYEIFCELRNIVAEKTKQIRSIAKSIASLDALLGLSI--TSVENNFIK 668
Query: 512 PCMKPMG----TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
P + P+ S + R+PIVE L +I ND+ F+ + ++TGPN GKS
Sbjct: 669 PSLIPINDSTTKNSTKIIAGRNPIVEQLLNDKQFIANDISFEENQ-KLIILTGPNASGKS 727
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
+IR +G+ LAQIG FVP ++A I + D+IFTR+GA D Q G STFM+EM ETA+++
Sbjct: 728 CFIRQLGLIQILAQIGSFVPANNAEIKIADRIFTRIGAVDDQSSGQSTFMVEMSETASIL 787
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T +SLV++DE+GRGTSTFDG +A S++ LA Q T+FATH+HE+ L
Sbjct: 788 NQATSSSLVLLDEIGRGTSTFDGLSIAWSVSEYLAKIIQCNTIFATHYHELNYLKNSNKN 847
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+N QV + D L+ +++ G KSYG+ AK+AG P++++E+A+ ++ E
Sbjct: 848 IQNFQVLVEQNNDQLIFSHRIVKGGSNKSYGIEAAKLAGVPKEVIEKAKSVLNSLE 903
>gi|417907776|ref|ZP_12551543.1| DNA mismatch repair protein MutS [Staphylococcus capitis VCU116]
gi|341594863|gb|EGS37541.1| DNA mismatch repair protein MutS [Staphylococcus capitis VCU116]
Length = 869
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 266/525 (50%), Gaps = 47/525 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL ++D +TP G R L QW+ +PL D I +R V +N R L Y L +
Sbjct: 271 TLLWLMDETKTPMGARRLKQWVDRPLISKDQINDRLNIVEEFINRFIERDTLRNY-LNQV 329
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL------------VQNVEASN 361
D++ L R+ +D ++ +S++P + +L L +
Sbjct: 330 YDIERLVGRVSYGNVNARDLIQLKHSISEIPHIKELLNELDAQTTTQFSELEPLDDLLEL 389
Query: 362 LNTILSSLQSLKMMDR---KDAVMDKMKEYLESTARRLNLVAD-----------KTIKLE 407
L L + + D K +++ EYLE++ N +A+ K++K+
Sbjct: 390 LEESLVEEPPISVKDGGLFKTGFNEQLDEYLEASKNGKNWLAELQAKERERTGIKSLKIS 449
Query: 408 -NSPQGFAYRIT---MKLNNSIDDRYTILDTVRGGVRFQDDRLATA-----NTQYQAIQR 458
N G+ IT ++ D Y T+ RF D L + +AI+
Sbjct: 450 FNKVFGYFIEITRANLQGFEPSDYGYNRKQTLSNAERFITDELKEKEDIILGAEDKAIEL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ + + E I YT+ L Q + ++++ D L SF A YVRP
Sbjct: 510 EYQLFVK--LREHI---KTYTERLQQQAKIISELDCLQSF--AEIAQKYNYVRPSFSDDK 562
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
T L L RHP+VE + Y+PND + + L+TGPNM GKSTY+R I +
Sbjct: 563 T--LHLENSRHPVVERVMDHNDYVPNDCSLNNDTFIY-LITGPNMSGKSTYMRQIAIISI 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQ+G +VPCDSA + + DQIFTR+GAAD G STFM+EM E + TENSL+I
Sbjct: 620 MAQMGAYVPCDSAILPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A ++ +A TLF+TH+HE+ L +++P +NV V+A E
Sbjct: 680 DEIGRGTSTYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSLDQMLPCLKNVHVAADEY 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+ L+ L++VK G+ SYG+ AK+A PE+++ +A+ ++ E+E
Sbjct: 740 QGELIFLHKVKDGAVDDSYGIQVAKLADLPEEVISRAQVILDEFE 784
>gi|15926878|ref|NP_374411.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus N315]
gi|21282907|ref|NP_645995.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MW2]
gi|49486134|ref|YP_043355.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57634628|ref|NP_371819.2| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus Mu50]
gi|57651865|ref|YP_186171.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus COL]
gi|148267785|ref|YP_001246728.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JH9]
gi|150393844|ref|YP_001316519.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JH1]
gi|151221416|ref|YP_001332238.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979616|ref|YP_001441875.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus Mu3]
gi|161509461|ref|YP_001575120.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221142529|ref|ZP_03567022.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253316432|ref|ZP_04839645.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253731914|ref|ZP_04866079.1| MutS protein [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|255006082|ref|ZP_05144683.2| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257795649|ref|ZP_05644628.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9781]
gi|258416052|ref|ZP_05682320.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9763]
gi|258421635|ref|ZP_05684559.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9719]
gi|258434791|ref|ZP_05688865.1| DNA mismatch repair protein mutS [Staphylococcus aureus A9299]
gi|258444633|ref|ZP_05692962.1| DNA mismatch repair protein mutS [Staphylococcus aureus A8115]
gi|258447534|ref|ZP_05695678.1| DNA mismatch repair protein mutS [Staphylococcus aureus A6300]
gi|258449376|ref|ZP_05697479.1| DNA mismatch repair protein mutS [Staphylococcus aureus A6224]
gi|258454755|ref|ZP_05702719.1| DNA mismatch repair protein mutS [Staphylococcus aureus A5937]
gi|262051355|ref|ZP_06023578.1| DNA mismatch repair protein [Staphylococcus aureus 930918-3]
gi|269202912|ref|YP_003282181.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ED98]
gi|282892783|ref|ZP_06301018.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8117]
gi|282920539|ref|ZP_06328260.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9765]
gi|282927637|ref|ZP_06335253.1| DNA mismatch repair protein MutS [Staphylococcus aureus A10102]
gi|284024288|ref|ZP_06378686.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 132]
gi|294848291|ref|ZP_06789038.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9754]
gi|295406232|ref|ZP_06816039.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8819]
gi|296274853|ref|ZP_06857360.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MR1]
gi|297244460|ref|ZP_06928343.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8796]
gi|300912140|ref|ZP_07129583.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381140|ref|ZP_07363793.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|384861888|ref|YP_005744608.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|386830830|ref|YP_006237484.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387150438|ref|YP_005742002.1| DNA mismatch repair protein MutS [Staphylococcus aureus 04-02981]
gi|415686487|ref|ZP_11450576.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|415691145|ref|ZP_11453384.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|417651404|ref|ZP_12301167.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21172]
gi|417653287|ref|ZP_12303021.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21193]
gi|417797873|ref|ZP_12445059.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21310]
gi|417802669|ref|ZP_12449726.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21318]
gi|418284588|ref|ZP_12897305.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21209]
gi|418314097|ref|ZP_12925576.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21334]
gi|418317218|ref|ZP_12928642.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21340]
gi|418317655|ref|ZP_12929071.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21232]
gi|418321701|ref|ZP_12933040.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus VCU006]
gi|418424436|ref|ZP_12997558.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427431|ref|ZP_13000443.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430271|ref|ZP_13003187.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433237|ref|ZP_13006014.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS4]
gi|418436908|ref|ZP_13008710.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS5]
gi|418439782|ref|ZP_13011488.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS6]
gi|418442832|ref|ZP_13014434.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS7]
gi|418445892|ref|ZP_13017368.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS8]
gi|418448838|ref|ZP_13020229.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS9]
gi|418451659|ref|ZP_13022993.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS10]
gi|418454715|ref|ZP_13025977.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418457591|ref|ZP_13028794.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS11b]
gi|418569133|ref|ZP_13133473.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21272]
gi|418570846|ref|ZP_13135107.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21283]
gi|418579129|ref|ZP_13143224.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418638066|ref|ZP_13200369.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-3]
gi|418642847|ref|ZP_13205033.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-24]
gi|418646090|ref|ZP_13208205.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-55]
gi|418648314|ref|ZP_13210359.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-88]
gi|418649287|ref|ZP_13211315.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-91]
gi|418654708|ref|ZP_13216604.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-99]
gi|418655428|ref|ZP_13217288.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-105]
gi|418660133|ref|ZP_13221775.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-111]
gi|418662222|ref|ZP_13223775.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-122]
gi|418873611|ref|ZP_13427906.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-125]
gi|418878144|ref|ZP_13432379.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418880974|ref|ZP_13435193.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418886557|ref|ZP_13440705.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418894995|ref|ZP_13449090.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418903508|ref|ZP_13457549.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418906231|ref|ZP_13460258.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418911902|ref|ZP_13465885.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG547]
gi|418914393|ref|ZP_13468365.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920374|ref|ZP_13474307.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418925532|ref|ZP_13479434.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928555|ref|ZP_13482441.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418931366|ref|ZP_13485207.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418934198|ref|ZP_13488021.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418947386|ref|ZP_13499760.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-157]
gi|418955427|ref|ZP_13507367.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-189]
gi|418988117|ref|ZP_13535790.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418991159|ref|ZP_13538820.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419784953|ref|ZP_14310711.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-M]
gi|421150247|ref|ZP_15609903.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742760|ref|ZP_16796760.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745472|ref|ZP_16799411.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424768019|ref|ZP_18195312.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CM05]
gi|440706035|ref|ZP_20886784.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21282]
gi|443636916|ref|ZP_21121009.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21236]
gi|443639712|ref|ZP_21123713.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21196]
gi|448743367|ref|ZP_21725276.1| DNA mismatch repair protein MutS [Staphylococcus aureus KT/Y21]
gi|44888235|sp|Q931S8.2|MUTS_STAAM RecName: Full=DNA mismatch repair protein MutS
gi|54037876|sp|P65494.1|MUTS_STAAW RecName: Full=DNA mismatch repair protein MutS
gi|54041517|sp|P65493.1|MUTS_STAAN RecName: Full=DNA mismatch repair protein MutS
gi|56749199|sp|Q6G9R8.1|MUTS_STAAS RecName: Full=DNA mismatch repair protein MutS
gi|61213893|sp|Q5HGD6.1|MUTS_STAAC RecName: Full=DNA mismatch repair protein MutS
gi|110810498|sp|P0C1S1.1|MUTS_STAAU RecName: Full=DNA mismatch repair protein MutS
gi|166232141|sp|A7X1T6.1|MUTS_STAA1 RecName: Full=DNA mismatch repair protein MutS
gi|172048870|sp|A6QGJ4.1|MUTS_STAAE RecName: Full=DNA mismatch repair protein MutS
gi|189083196|sp|A6U1B4.1|MUTS_STAA2 RecName: Full=DNA mismatch repair protein MutS
gi|189083197|sp|A5ISH9.1|MUTS_STAA9 RecName: Full=DNA mismatch repair protein MutS
gi|189083198|sp|A8Z1W6.1|MUTS_STAAT RecName: Full=DNA mismatch repair protein MutS
gi|13701095|dbj|BAB42390.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
N315]
gi|21204346|dbj|BAB95043.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
MW2]
gi|32731679|gb|AAP87082.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus COL]
gi|32731681|gb|AAP87083.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731683|gb|AAP87084.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731685|gb|AAP87085.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731687|gb|AAP87086.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731689|gb|AAP87087.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731693|gb|AAP87089.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731697|gb|AAP87091.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731699|gb|AAP87092.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|46395341|dbj|BAB57457.2| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|49244577|emb|CAG43006.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57286051|gb|AAW38145.1| DNA mismatch repair protein HexA [Staphylococcus aureus subsp.
aureus COL]
gi|147740854|gb|ABQ49152.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JH9]
gi|149946296|gb|ABR52232.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JH1]
gi|150374216|dbj|BAF67476.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156721751|dbj|BAF78168.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160368270|gb|ABX29241.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|172087852|emb|CAQ35082.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087854|emb|CAQ35083.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087860|emb|CAQ35086.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087866|emb|CAQ35089.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087868|emb|CAQ35090.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087870|emb|CAQ35091.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087872|emb|CAQ35092.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087876|emb|CAQ35094.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087880|emb|CAQ35096.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087884|emb|CAQ35098.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087886|emb|CAQ35099.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|253724324|gb|EES93053.1| MutS protein [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257789621|gb|EEV27961.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9781]
gi|257839200|gb|EEV63676.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9763]
gi|257842321|gb|EEV66746.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9719]
gi|257849152|gb|EEV73134.1| DNA mismatch repair protein mutS [Staphylococcus aureus A9299]
gi|257850126|gb|EEV74079.1| DNA mismatch repair protein mutS [Staphylococcus aureus A8115]
gi|257853725|gb|EEV76684.1| DNA mismatch repair protein mutS [Staphylococcus aureus A6300]
gi|257857364|gb|EEV80262.1| DNA mismatch repair protein mutS [Staphylococcus aureus A6224]
gi|257863138|gb|EEV85902.1| DNA mismatch repair protein mutS [Staphylococcus aureus A5937]
gi|259160730|gb|EEW45751.1| DNA mismatch repair protein [Staphylococcus aureus 930918-3]
gi|262075202|gb|ACY11175.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ED98]
gi|282590640|gb|EFB95717.1| DNA mismatch repair protein MutS [Staphylococcus aureus A10102]
gi|282594201|gb|EFB99188.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9765]
gi|282764780|gb|EFC04905.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8117]
gi|285816977|gb|ADC37464.1| DNA mismatch repair protein MutS [Staphylococcus aureus 04-02981]
gi|294825091|gb|EFG41513.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9754]
gi|294968820|gb|EFG44842.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8819]
gi|297178490|gb|EFH37736.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8796]
gi|300886386|gb|EFK81588.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751117|gb|ADL65294.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340123|gb|EFM06064.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315131089|gb|EFT87073.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315198537|gb|EFU28866.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140887|gb|EFW32734.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320143846|gb|EFW35618.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329727588|gb|EGG64044.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21172]
gi|329733669|gb|EGG69997.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21193]
gi|334274305|gb|EGL92627.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21318]
gi|334276995|gb|EGL95234.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21310]
gi|365173136|gb|EHM63723.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21209]
gi|365224316|gb|EHM65581.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus VCU006]
gi|365234235|gb|EHM75173.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21334]
gi|365239590|gb|EHM80392.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21340]
gi|365244923|gb|EHM85575.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21232]
gi|371978318|gb|EHO95568.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21272]
gi|371983026|gb|EHP00174.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21283]
gi|375014533|gb|EHS08214.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-99]
gi|375015960|gb|EHS09604.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-24]
gi|375021556|gb|EHS15052.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-55]
gi|375023290|gb|EHS16753.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-3]
gi|375026731|gb|EHS20110.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-88]
gi|375029660|gb|EHS22985.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-91]
gi|375033023|gb|EHS26234.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-111]
gi|375036913|gb|EHS29974.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-122]
gi|375037144|gb|EHS30197.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-105]
gi|375366148|gb|EHS70160.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370910|gb|EHS74702.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-189]
gi|375376129|gb|EHS79678.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-157]
gi|377694266|gb|EHT18631.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377694801|gb|EHT19165.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377697156|gb|EHT21511.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377714648|gb|EHT38847.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377719905|gb|EHT44075.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377723281|gb|EHT47406.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725280|gb|EHT49395.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG547]
gi|377725510|gb|EHT49623.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731867|gb|EHT55920.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377738467|gb|EHT62476.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742523|gb|EHT66508.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744601|gb|EHT68578.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377757895|gb|EHT81783.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377765531|gb|EHT89381.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377765733|gb|EHT89582.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377770941|gb|EHT94700.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383363554|gb|EID40886.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-M]
gi|385196222|emb|CCG15844.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387718666|gb|EIK06624.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387719018|gb|EIK06974.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS2]
gi|387720343|gb|EIK08255.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS1]
gi|387725677|gb|EIK13281.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS4]
gi|387728012|gb|EIK15512.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS5]
gi|387730611|gb|EIK17978.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS6]
gi|387735820|gb|EIK22930.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS8]
gi|387737497|gb|EIK24563.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS7]
gi|387737747|gb|EIK24807.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS9]
gi|387744540|gb|EIK31304.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS10]
gi|387745830|gb|EIK32580.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387747323|gb|EIK34032.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS11b]
gi|394329637|gb|EJE55739.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|402348656|gb|EJU83635.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CM05]
gi|408423480|emb|CCJ10891.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408425470|emb|CCJ12857.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408427458|emb|CCJ14821.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408429445|emb|CCJ26610.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408431433|emb|CCJ18748.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408433427|emb|CCJ20712.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408435418|emb|CCJ22678.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408437403|emb|CCJ24646.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|436507566|gb|ELP43246.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21282]
gi|443406363|gb|ELS64943.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21196]
gi|443406893|gb|ELS65463.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21236]
gi|445563296|gb|ELY19458.1| DNA mismatch repair protein MutS [Staphylococcus aureus KT/Y21]
Length = 872
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|384869830|ref|YP_005752544.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus T0131]
gi|329313965|gb|AEB88378.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus T0131]
Length = 872
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|229162704|ref|ZP_04290661.1| DNA mismatch repair protein mutS [Bacillus cereus R309803]
gi|228620586|gb|EEK77455.1| DNA mismatch repair protein mutS [Bacillus cereus R309803]
Length = 890
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVL--TT 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKE 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|423458048|ref|ZP_17434845.1| DNA mismatch repair protein mutS [Bacillus cereus BAG5X2-1]
gi|401148432|gb|EJQ55925.1| DNA mismatch repair protein mutS [Bacillus cereus BAG5X2-1]
Length = 890
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYISKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLGQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|417892208|ref|ZP_12536262.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21201]
gi|341858175|gb|EGS98976.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21201]
Length = 872
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|417649426|ref|ZP_12299225.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21189]
gi|440734741|ref|ZP_20914353.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|110810486|sp|Q2FYZ9.2|MUTS_STAA8 RecName: Full=DNA mismatch repair protein MutS
gi|14194229|gb|AAK56305.1|AF378369_1 DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|14970731|emb|CAC44463.1| MutS protein [Staphylococcus aureus]
gi|32731677|gb|AAP87081.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731691|gb|AAP87088.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|329727795|gb|EGG64246.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21189]
gi|436431769|gb|ELP29122.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
Length = 872
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|423389970|ref|ZP_17367196.1| DNA mismatch repair protein mutS [Bacillus cereus BAG1X1-3]
gi|401640886|gb|EJS58612.1| DNA mismatch repair protein mutS [Bacillus cereus BAG1X1-3]
Length = 890
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYISKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPAKEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|428319738|ref|YP_007117620.1| DNA mismatch repair protein MutS [Oscillatoria nigro-viridis PCC
7112]
gi|428243418|gb|AFZ09204.1| DNA mismatch repair protein MutS [Oscillatoria nigro-viridis PCC
7112]
Length = 875
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 198/701 (28%), Positives = 330/701 (47%), Gaps = 71/701 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR-- 147
G+A D+ T +F + D L +++ P E L+P N +VT+L
Sbjct: 167 GLAYTDISTGEFVTTQA---DSLEQLTLELLRLQPSEVLVPT-----NAPDLVTMLRPGE 218
Query: 148 ----------NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHC 197
N C + R + FS + Q + L +F L+ L L+ A
Sbjct: 219 KSEHLPDCLPNSFCYSLRSQIPFSLSEAKQRI--LQKFKVRSLEG---LGCGHLSLAVRA 273
Query: 198 LRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLG 257
L+ Y+E E ++ +H+ + ++ + +L + Q + SLL
Sbjct: 274 AGGLLQYIEETQKEKAVSLQRLHTYTLTDFLILDYQTRRNLEI--TQTVRDGVFHGSLLW 331
Query: 258 ILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQ 317
+D+ T G R L +W+ QPL ++ I RH + LV N R +L + LR + D++
Sbjct: 332 AIDKTSTAMGGRALRRWVLQPLLNIKGICARHDTIQELVENNGLRQDLQQL-LRQIYDIE 390
Query: 318 SLAMRIGRKKAGLKDCYRVYEGVSQLPKLISI------------------LESLVQNVEA 359
L R G A +D + + +S+LP L SI LE L + A
Sbjct: 391 RLTGRAGSGTASARDLVALADSLSKLPALASIAAQGISPYLKALQNVPPILEELANTIHA 450
Query: 360 SNLNTILSSLQSLKMMDRK-DAVMDKMK-------EY---LESTARRLNLVADKTIKLEN 408
++ L+ ++ + ++D+M+ E+ LE+T R+ +++ + N
Sbjct: 451 HLVDEPPIHLKEGGLIRSGINPMLDEMRHTASADQEWIANLEATERKRTGISNLKVGY-N 509
Query: 409 SPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIV 468
G+ IT + + YT T+ R+ + L + + + + I
Sbjct: 510 KAFGYYISITKSKVDQVPKDYTRKQTLTNEERYSTEELKEREVRILTAREDLNQLEYDIF 569
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+V + + +S +A DVL +A + Y RP M + + + +
Sbjct: 570 AKVRSEVGEQAEIIRNVSRAVAAADVLCG--LAEVAVYQNYCRPTMTE--SREIKIIEGC 625
Query: 529 HPIVE--LQGGVSYIPNDVYFKSGEVSFN-----LVTGPNMGGKSTYIRSIGVSVFLAQI 581
HP+VE L G ++PN + E S N ++TGPN GKS Y+R +G+ +AQ+
Sbjct: 626 HPVVEKSLPPGF-FVPNSAFLGR-EKSLNRPDLIILTGPNASGKSCYLRQVGLIQLMAQM 683
Query: 582 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 641
G FVP +A++ + D+IFTRVGA D G STFM+EM ETA ++ T SLV++DE+G
Sbjct: 684 GSFVPAKAASLGICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATPQSLVLLDEIG 743
Query: 642 RGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNL 701
RGT+TFDG +A S+A LA+ + T+FATH+HE+ L+ ++ N QV+ E D +
Sbjct: 744 RGTATFDGLSIAWSVAEYLATEIRARTIFATHYHELNELASILDNVANYQVTVKELPDQI 803
Query: 702 VLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V L+QV+PG KSYG+ ++AG P ++++AR +MK+ E
Sbjct: 804 VFLHQVQPGGADKSYGIEAGRLAGLPPSVIDRARQVMKQIE 844
>gi|258423864|ref|ZP_05686749.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9635]
gi|418889088|ref|ZP_13443224.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1524]
gi|257845893|gb|EEV69922.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9635]
gi|377754598|gb|EHT78507.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 872
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILES-----LVQNVEASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S LVQ + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKFNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PND E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNDCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|257083163|ref|ZP_05577524.1| MutS 1 protein [Enterococcus faecalis Fly1]
gi|256991193|gb|EEU78495.1| MutS 1 protein [Enterococcus faecalis Fly1]
Length = 858
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 273/535 (51%), Gaps = 47/535 (8%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
Q + Q +LL +LD +T G RLL QW+ +PL I R V L+N R+
Sbjct: 269 QSIRTGQKKGTLLWLLDETKTAMGGRLLKQWLDRPLIQERQIKARQEMVQSLLNAYFERL 328
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+L + AL + D++ LA R+ +D ++ + Q+P + ++ + Q E +L
Sbjct: 329 DL-QAALTNVYDLERLAGRVAFGSVNGRDLIQLRTSLEQVPTIRQLIVGINQG-EWDDLL 386
Query: 364 TILSSLQSLKMMDR-----------------KDAVMDKMKEYLESTARRLNLVADKTIK- 405
L+ ++ L + KD D++ EY ++ +A+ K
Sbjct: 387 VDLNPVEDLVALIATAINEEAPLQITEGNVIKDGYNDQLDEYRDAMRNGKQWLAELEAKE 446
Query: 406 -----LENSPQG----FAYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLA-----T 448
++N G F Y I + L N + +Y T+ RF L
Sbjct: 447 RQETGIKNLKIGYNRVFGYFIEITKSNLANLEEGKYERKQTLANAERFITPELKELERLI 506
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+ ++++ EY+ V E + + QTL + ++ DVL SF+I S
Sbjct: 507 LEAEEKSVELEYQLFLA--VREQVKTNIDRLQTL---AKTISAVDVLQSFAIISERYQ-- 559
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
YVRP ++ T +L + + RHP+VE + G YIPN + E L+TGPNM GKST
Sbjct: 560 YVRPTLRS-NTKNLAIVEGRHPVVEKVLGHQEYIPNSIRMNP-ETDILLITGPNMSGKST 617
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
Y+R + ++V +AQIGCFVP +SA + + DQIFTR+GA+D G STFM+EM E ++
Sbjct: 618 YMRQLALTVVMAQIGCFVPAESAEMPIFDQIFTRIGASDDLIAGQSTFMVEMMEANQALR 677
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
T NSL++ DELGRGT+T+DG +A +I + Q TLF+TH+HE+ +L +
Sbjct: 678 HATPNSLILFDELGRGTATYDGMALAQAIIEYIHREVQAKTLFSTHYHELTVLDETLKGL 737
Query: 688 RNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+N+ V A+E++ +V L+++ G KSYG+H AK+AG P +LE+A ++ E
Sbjct: 738 KNIHVGAVEKDGEVVFLHKMMEGPADKSYGIHVAKIAGLPSPLLERAATILSALE 792
>gi|257126782|ref|YP_003164896.1| DNA mismatch repair protein MutS [Leptotrichia buccalis C-1013-b]
gi|257050721|gb|ACV39905.1| DNA mismatch repair protein MutS [Leptotrichia buccalis C-1013-b]
Length = 892
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 192/690 (27%), Positives = 331/690 (47%), Gaps = 56/690 (8%)
Query: 85 LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTI 144
+ N +G+A +D+ T +F + E+ D + L I + PKE L+ ++ + K K+
Sbjct: 132 IENKIGIAYIDITTGEFKVTEVEKDADFVKLFNEINKIEPKEVLVTEDFYREIKEKLDDF 191
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
L +N +T K S + LM D +V + +K+ + + +
Sbjct: 192 LQKNDSVVTFVSKIRDSAKYLM-DYFEIVSLESYGIKDKKGIIGAAAMALDYAAA----- 245
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRT 264
M E + I ++ S Y +++ +L +L Q + Y SLL +LD C+T
Sbjct: 246 ---MQVEHELTVEKIEFVNISNYAEINAITSRNLELLKNQREKTV--YGSLLWVLDECKT 300
Query: 265 PQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIG 324
G RLL +++ PL +++ I +R V ++N R +L E L + D++ L +I
Sbjct: 301 SMGTRLLKRFINNPLLNIEKIRKRQEDVQYFIDNILIREDLRE-KLEDIYDLERLLGKII 359
Query: 325 RKKAGLKDCYRVYEGVSQLPKLISILES--LVQNVEASNLNTILSSLQSLKMMD---RKD 379
KD + + + +++ ILE+ +N++A+ L + K++D +D
Sbjct: 360 FGSENGKDLTALKKTIKSAVEIMKILENTDFFKNIDANIL------FECYKIIDDSINED 413
Query: 380 A-----------------------VMDKMKEYL---ESTARRLNLVADKTIKLENSPQGF 413
A +M+ K++L E R + + IK N G+
Sbjct: 414 APFSVREGGIIKSGYNEELDEIRNIMNSGKDFLLDIEQRERETTGIKNMKIKF-NKVFGY 472
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIG 473
IT + + + Y T+ R+ L + + E + + +E+ G
Sbjct: 473 FIEITKSNLSMVPEHYIRKQTLSNSERYITPELKKYEDTIINSKAKIEDLEYHLFKEING 532
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE 533
+ + L++L++ LA DV+VSF++++ Y +P M S + RHP+VE
Sbjct: 533 KIKEHRKILSELAERLAYIDVMVSFAVSAI--ENDYAKPEMNE--EYSFEIEDGRHPVVE 588
Query: 534 -LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATI 592
L G Y+ ND F E SF ++TGPNM GKSTY++ I + +AQIG FVP A +
Sbjct: 589 KLIGRTDYVSNDTVFTEKE-SFVVLTGPNMSGKSTYMKQIALISIMAQIGSFVPAKKANL 647
Query: 593 SVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGM 652
SV+D+ TR+GA+D G STFM+EM E + ++ TE SL+I+DE+GRGTST DG +
Sbjct: 648 SVIDKYLTRIGASDDILTGQSTFMVEMSEVSNILNNATEKSLIILDEVGRGTSTTDGVSI 707
Query: 653 ACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSC 712
A +I + T+FATH+HE+ L N ++ E++ ++ L + G
Sbjct: 708 ATAILMYIHDKIGAKTVFATHYHELTDLENKFAHIVNYRIEVDEKQGKVMFLRNIVKGGA 767
Query: 713 VKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+ AK+AG P+++L +++ ++K E
Sbjct: 768 DKSYGIEVAKLAGLPKEILVESKKILKRLE 797
>gi|53729249|ref|ZP_00133779.2| COG0249: Mismatch repair ATPase (MutS family) [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209066|ref|YP_001054291.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189030435|sp|A3N2Q0.1|MUTS_ACTP2 RecName: Full=DNA mismatch repair protein MutS
gi|126097858|gb|ABN74686.1| DNA mismatch repair protein MutS [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 864
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 202/697 (28%), Positives = 341/697 (48%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+P N EA+ + + LLPAE L IL+ K
Sbjct: 142 AIATLDMTSGRFLITELP------NKEALAAEL---QRLLPAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S + + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTILLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QKEQRIEPLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D + ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTHLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLKRAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 MQLAAMALSELDVLTN--LAERAESLNYVRPTFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TE SLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATEKSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KKTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
>gi|229140410|ref|ZP_04268965.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST26]
gi|228642971|gb|EEK99247.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST26]
Length = 886
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 279/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLITRAKEVLAQLEGQEEIIIPKRVEVKA 799
Query: 758 REEE 761
+ +E
Sbjct: 800 QAQE 803
>gi|448741812|ref|ZP_21723769.1| DNA mismatch repair protein MutS [Staphylococcus aureus KT/314250]
gi|445547450|gb|ELY15719.1| DNA mismatch repair protein MutS [Staphylococcus aureus KT/314250]
Length = 872
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYIKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|406670686|ref|ZP_11077931.1| DNA mismatch repair protein MutS [Facklamia hominis CCUG 36813]
gi|405582202|gb|EKB56208.1| DNA mismatch repair protein MutS [Facklamia hominis CCUG 36813]
Length = 869
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 172/573 (30%), Positives = 293/573 (51%), Gaps = 60/573 (10%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D+M + + S + S+Y+ M+ S L + + + + SLL +LD+ +T G RLL
Sbjct: 247 DHMQK--VQSYELSQYLQMNPYTKSQLEL--TESLRTQKKKGSLLWLLDQTQTAMGGRLL 302
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL +++RH V+ L+++ AR+++ E+ L+ + D++ L +I + +
Sbjct: 303 HQWLDKPLLFKQPLMDRHLKVSALMDHYFARLDIQEH-LKKVYDLERLVTKISMQSVNAR 361
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNLN--TILSSLQSLKMM-------------- 375
+ ++ + LP + LES+ Q+++ + +L+ SL+++
Sbjct: 362 EMTQLKRSLVALPAINKALESINQDIQQNGREPFVLLNDFTSLRILLDQALVDDPPISIT 421
Query: 376 --------------DRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGFAYRITMK 420
D A+ + L+ R KT+K+ N G+ I+
Sbjct: 422 EGGFIRTGYDEELDDYHQALEHGQEWLLDLQERERQHTGLKTLKVGYNKVFGYYIEISRL 481
Query: 421 LNNSIDD-RYTILDTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGI 474
+DD RY T+ RF + L + Q +++Q EY ++ ++
Sbjct: 482 QAGQLDDERYIRKQTLANSERFITEELKSMEERILQAQEKSVQLEY-----ALFIDLREK 536
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP----CMKPMGTGSLVLNQCRHP 530
Y + L +L+ LA DVL F AS YV+ C K + L + RHP
Sbjct: 537 INQYKEALQELARNLASLDVLAGF--ASLSESNHYVQAEISDCPK-----DVQLVESRHP 589
Query: 531 IVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDS 589
++E L G S++ ND+ + L+TGPNM GKSTY+R + +V + QIGCFVP
Sbjct: 590 VLEQLIGSESFVANDLSLTPDQFVL-LLTGPNMSGKSTYMRQVAYAVIMNQIGCFVPAKK 648
Query: 590 ATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDG 649
A + +VDQIFTR+G++D G STFM+EM ET + T SL++ DE+GRGT+TFDG
Sbjct: 649 ARLPLVDQIFTRIGSSDDLSAGQSTFMVEMIETNYALANATNRSLILFDEIGRGTATFDG 708
Query: 650 FGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKP 709
+A +I + + T+F+TH+HE+ L + N+ V A+E+ NLV LY++
Sbjct: 709 IALAQAILYYICQKVEAMTIFSTHYHELVDLEDRLTALVNIHVGAVEEHGNLVFLYKILK 768
Query: 710 GSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
G KSYG+H A++AG P+++L+ +++++ E E
Sbjct: 769 GPADKSYGIHVARLAGMPDELLDHSQEVLDELE 801
>gi|423418322|ref|ZP_17395411.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3X2-1]
gi|401106595|gb|EJQ14556.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3X2-1]
Length = 890
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLGQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 805
Query: 758 RE 759
+E
Sbjct: 806 QE 807
>gi|257080441|ref|ZP_05574802.1| MutS 1 protein [Enterococcus faecalis E1Sol]
gi|256988471|gb|EEU75773.1| MutS 1 protein [Enterococcus faecalis E1Sol]
Length = 858
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 272/535 (50%), Gaps = 47/535 (8%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
Q + Q +LL +LD +T G RLL QW+ +PL I R V L+N R+
Sbjct: 269 QSIRTGQKKGTLLWLLDETKTAMGGRLLKQWLDRPLIQERQIKARQEMVQSLLNAYFERL 328
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+L + AL + D++ LA R+ +D ++ + Q+P + ++ + Q E +L
Sbjct: 329 DL-QAALTNVYDLERLAGRVAFGSVNGRDLIQLRTSLEQVPTIRQLIVGINQG-EWDDLL 386
Query: 364 TILSSLQSLKMMDR-----------------KDAVMDKMKEYLESTARRLNLVADKTIK- 405
L+ ++ L + KD D++ EY ++ +A+ K
Sbjct: 387 VDLNPVEDLVALIATAINEEAPLQITEGNVIKDGYNDQLDEYRDAMRNGKQWLAELEAKE 446
Query: 406 -----LENSPQG----FAYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLA-----T 448
++N G F Y I + L N + +Y T+ RF L
Sbjct: 447 RQETGIKNLKIGYNRVFGYFIEITKSNLANLEEGKYERKQTLANAERFITPELKELERLI 506
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+ ++++ EY H V E + + QTL + ++ DVL SF A+
Sbjct: 507 LEAEEKSVELEY--HLFLAVREQVKTNIDRLQTL---AKTISAVDVLQSF--ATISERYQ 559
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
YVRP ++ T +L + + RHP+VE + G YIPN + E L+TGPNM GKST
Sbjct: 560 YVRPTLRS-NTKNLAIVEGRHPVVEKVLGHQEYIPNSIRMNP-ETDILLITGPNMSGKST 617
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
Y+R + ++V +AQIGCFVP +SA + + DQIFTR+GA+D G STFM+EM E ++
Sbjct: 618 YMRQLALTVVMAQIGCFVPAESAEMPIFDQIFTRIGASDDLIAGQSTFMVEMMEANQALR 677
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
T NSL++ DELGRGT+T+DG +A +I + Q TLF+TH+HE+ +L +
Sbjct: 678 HATPNSLILFDELGRGTATYDGMALAQAIIEYIHREVQAKTLFSTHYHELTVLDETLKGL 737
Query: 688 RNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+N+ V A+E++ +V L+++ G KSYG+H AK+AG P +LE+A ++ E
Sbjct: 738 KNIHVGAVEKDGEVVFLHKMMEGPADKSYGIHVAKIAGLPSPLLERAATILSALE 792
>gi|32731695|gb|AAP87090.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
Length = 872
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 EPSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|333370923|ref|ZP_08462893.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
gi|332976873|gb|EGK13695.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
Length = 890
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 199/700 (28%), Positives = 327/700 (46%), Gaps = 72/700 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A DL T +FY+ ++ D E Q PKE LL A L + + + R
Sbjct: 157 ALAAADLSTGEFYVTDVAGDGARVIDELAAYQ--PKEVLL-APCLGKETSLLEELRLRLG 213
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+T + ED +Q R R + CL L++YL+
Sbjct: 214 AVIT------VTGEDELQSPEERSRMLGEHFPEDREQLTTPIQEEVACL--LLSYLQRTQ 265
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ I D +++ + + +L + + + +L G+LDR T G R
Sbjct: 266 KRGLSHMNRIRRYDAEQFMVLDVSARQTLEL--TRSLREGRKEGTLYGLLDRTATAMGSR 323
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL +W+ +PL DL+ I R + L ++ + E L+G+ D++ L RI A
Sbjct: 324 LLKKWLDKPLLDLNEIRRRQEEIQALTDHLILLEEIRE-QLKGVYDLERLCARIAYGSAN 382
Query: 330 LKDCYRVYEGVSQLP------------KLISILESL--VQNVEASNLNTI-----LSSLQ 370
+D + + ++P L+S+ E L +Q V +I +S +
Sbjct: 383 GRDLISLRRSLEKIPDLKRCLSETNASALVSVAEGLDPLQEVVELTAKSIADEAPVSVRE 442
Query: 371 SLKMMDRKDAVMDKMKEY----------LESTARRLNLVADKTIKLENSPQGFAYRIT-M 419
+ D D +D+++E LE R + + N G+ +T
Sbjct: 443 GNLIKDGYDEELDRLREVQRDGRGWITRLEQREREATGIRSLKVGF-NKVFGYYIEVTKA 501
Query: 420 KLNNSIDDRYTILDTVRGGVRF------QDDRLATANTQYQAIQREYETH---QQSIVEE 470
L + + RY T+ RF + +RL + ++++ EY+ ++ + EE
Sbjct: 502 NLRHLPEGRYQRKQTLANAERFVTPELKERERL-ILEAEEKSVELEYQLFTRVRERVAEE 560
Query: 471 VIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHP 530
+ I L+D +A+ D L S+A+ YVRP + G + + RHP
Sbjct: 561 IPRI--------QMLADRVARLDAL--HSLAAVSGKYGYVRPDVNR--EGRIRITGGRHP 608
Query: 531 IVEL---QGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
+VE +G ++PND E L+TGPNM GKSTY+R + + +AQIGCFVP
Sbjct: 609 VVEAATREG--EFVPNDTRMDQEEHQLLLITGPNMAGKSTYMRQVALITLMAQIGCFVPA 666
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
A I +VD+IFTR+GAAD G STFM+EM ET + + T SL+++DE+GRGTST+
Sbjct: 667 QRAEIGIVDRIFTRIGAADDLVGGRSTFMVEMDETRLALAQATSRSLILLDEVGRGTSTY 726
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A +I + H TLF+TH+HE+ L +P N+ +E+E +V L+++
Sbjct: 727 DGMALAHAIVEYIHDHVGAKTLFSTHYHELTHLEADLPRVVNLHARCVEKEGEVVFLHRM 786
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDT 747
+PG +SYG+H A++AG P +++ +AR L++ E L+T
Sbjct: 787 EPGGADRSYGIHVAQLAGMPAEVIRRARSLLETLEGRLET 826
>gi|424780873|ref|ZP_18207740.1| DNA mismatch repair protein MutS [Catellicoccus marimammalium
M35/04/3]
gi|422842574|gb|EKU27025.1| DNA mismatch repair protein MutS [Catellicoccus marimammalium
M35/04/3]
Length = 868
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 169/585 (28%), Positives = 295/585 (50%), Gaps = 54/585 (9%)
Query: 196 HCLRSLINYLELMN--NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYD 253
C+ L+ Y+ N D++ + +D+ Y+ M S ++ ++ + +
Sbjct: 217 QCIADLLGYVADTQQCNLDHLQPAQYYQVDF--YLQMD--YYSKFNLELKKTIRTGKAEG 272
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L +L+ +T G R L +W+ +PL IV R V IL+++ R L E +G+
Sbjct: 273 TLFWLLNETKTAMGKRQLQRWIDRPLVKKAEIVARQEQVQILMDHYFERQRLVE-CFKGI 331
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES------------------LVQ 355
D++ L ++ + ++ ++ + + LP++I +LE L
Sbjct: 332 YDLERLVSKVALGRVNARELGQLKQSLQYLPEIIDLLEEMEIPTVKHWKGYLPSLMELTD 391
Query: 356 NVEASNLNTILSSLQSLKMMDRK-DAVMDKMKEY----------LESTARRLNLVADKTI 404
+E + + + S Q M+ + DA +D+ E LE+ R V + I
Sbjct: 392 ELEQALVEDLPLSTQEGGMIRKGYDATLDQYIEATENGVQWILELEAKEREKTGVKNLRI 451
Query: 405 KLENSPQGFAYRITMKLNNSI-DDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQR 458
K N+ G+ ++ I D+RY T+ RF +D + + I+R
Sbjct: 452 KFNNNS-GYYIEVSKAAAKQITDERYIKKQTLANSERFSTVELKDLEKVLLEAKTKRIER 510
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EYE + E + + L ++++ +A DVL SF++ + + Y RP
Sbjct: 511 EYELF--VTLREKVKAQGPW---LQRVAEEIATLDVLQSFAVLA--EERNYCRPTFNE-- 561
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
L + RHP++E + G Y+PND+ L+TGPNM GKSTY+R + ++V
Sbjct: 562 EHELKIIDGRHPVIEKVMGSNEYVPNDIVMDKNTYEL-LITGPNMSGKSTYMRQLALTVI 620
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
+AQ+G FVP A + + DQIFTR+GA+D Y G STFM+EM E + ++K T +SL++
Sbjct: 621 MAQMGSFVPASQAKLPLFDQIFTRIGASDDLYSGKSTFMVEMMEASEALRKATPDSLLLF 680
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DELGRGT+TFDG +A +I + + TLF+TH+HE+ +L+ +N+ VSA E+
Sbjct: 681 DELGRGTATFDGMALAQAIIEYIQQRVKAKTLFSTHYHELTVLADQFSEIKNIHVSAKEE 740
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L+ L++++PG+ +SYG+ A++A PE++L +A +++E E
Sbjct: 741 NGQLIFLHKMQPGAASQSYGIEVARLAQLPEELLIRAEAILQELE 785
>gi|423522400|ref|ZP_17498873.1| DNA mismatch repair protein mutS [Bacillus cereus HuA4-10]
gi|401175094|gb|EJQ82297.1| DNA mismatch repair protein mutS [Bacillus cereus HuA4-10]
Length = 899
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEENLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A PE ++ +A++++ + E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPESLIARAKEVLAQLE 790
>gi|319786617|ref|YP_004146092.1| DNA mismatch repair protein MutS [Pseudoxanthomonas suwonensis
11-1]
gi|317465129|gb|ADV26861.1| DNA mismatch repair protein MutS [Pseudoxanthomonas suwonensis
11-1]
Length = 865
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 276/528 (52%), Gaps = 42/528 (7%)
Query: 249 AQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
QT +LLG+LD TP G RLL +W+ +PL+D + + RH AV L+ A +L +
Sbjct: 286 GQTRHTLLGVLDSTITPMGGRLLRRWLHRPLRDRNVLGGRHHAVATLIEQ-RADADLRD- 343
Query: 309 ALRGLPDMQSLAMRIGRKKA------GLKDCYRVYEGVSQL------PKLISILESLVQN 356
RGL D++ + R+ + A L+D + G+ Q P+L ++ + L Q+
Sbjct: 344 GFRGLGDVERILTRVALRSARPRDLSTLRDALALLPGIRQALAPLDSPRLQALSDELGQH 403
Query: 357 VEASNL-NTILSSLQSLKMMDR------KDAVMDKMKEY----------LESTARRLNLV 399
E ++L + ++ LK+ D DA +D+++ LE+ R +
Sbjct: 404 DETAHLLASAVAPQPPLKLADGGVIAEGHDAELDELRRLSTNADQFLVDLEARERAATGI 463
Query: 400 ADKTIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
A T+K+ N G+ I+ ++ YT T+ G R+ + L + + + +
Sbjct: 464 A--TLKVGYNRVHGYYIEISKGQSDKAPVHYTRRQTLTGAERYITEELKSFEDKVLSARE 521
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
++ + E ++ + L + + L++ DVL +F A + RP +
Sbjct: 522 RALAREKFLYEALLDSLNTVLEPLKRCAGALSELDVLAAF--AERAQALDWARPELT--D 577
Query: 519 TGSLVLNQCRHPIVELQGGVSYIPNDVYF---KSGEVSFNLV-TGPNMGGKSTYIRSIGV 574
+ L + + RHP+VE + PND+ + G+ LV TGPNMGGKSTY+R +
Sbjct: 578 SPCLCIERGRHPVVEAVREEPFEPNDLELYGDRDGQARRMLVITGPNMGGKSTYMRQNAL 637
Query: 575 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 634
V LA IG FVP A I +D+I TR+GA D RG STFM+EM ET+ ++ TE SL
Sbjct: 638 IVLLAHIGSFVPASRAVIGPIDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATEQSL 697
Query: 635 VIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA 694
V++DE+GRGTST+DG +A ++AR LA+ + +TLFATH+ E+ L+ NV + A
Sbjct: 698 VLMDEIGRGTSTYDGLALADAVARHLATVNRCWTLFATHYFELTSLATPESGIANVHLDA 757
Query: 695 LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+E D+LV ++ V+ G+ +S+G+ A +AG P+ L QAR + E E
Sbjct: 758 VEHGDSLVFMHAVRDGAADRSFGLQVAALAGLPKATLAQARRRLAELE 805
>gi|126697173|ref|YP_001092059.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str. MIT
9301]
gi|189083171|sp|A3PFD3.1|MUTS_PROM0 RecName: Full=DNA mismatch repair protein MutS
gi|126544216|gb|ABO18458.1| putative DNA mismatch repair protein [Prochlorococcus marinus str.
MIT 9301]
Length = 913
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 180/592 (30%), Positives = 293/592 (49%), Gaps = 43/592 (7%)
Query: 191 LTTATHCLRSLINYLELMN--NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV---LPQQG 245
L AT L L+NYLE +N N D + I S+D+ + + + ++ L +
Sbjct: 315 LKNATRSLGGLLNYLEKINPSNLDKDSSVKI-SLDFPQIQYGHNKLIIDYQTQKNLEIKN 373
Query: 246 STSAQTY-DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMN 304
+ Y SLL +DR T G R L +W+ PL +++ I +R + + + R +
Sbjct: 374 TQRENNYVGSLLWSIDRTYTCMGARCLRRWIDSPLLNVNEIYKRQNIITNFFESKKLRTD 433
Query: 305 LHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----------V 354
LR + D++ LA R A +D + EG+ +LP+L SI+E +
Sbjct: 434 TQNL-LRAMGDLERLAGRACAGHASPRDLIAIAEGLKKLPRLKSIIELFKYDLPNWTDQL 492
Query: 355 QNVEASNL------------NTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLN---LV 399
N++ L N LS + + D D ++D ++ ++ + LN L
Sbjct: 493 INIDEGLLELADTISFKLVENPPLSISEGGMIHDGVDNILDGLRNLMDDYSEWLNKEELK 552
Query: 400 ADKTIKLENSP----QGFAYRITMKLN--NSIDDRYTILDTVRGGVRFQDDRLATANTQY 453
K K+ N + F Y I++ + N + T+ R+ + +
Sbjct: 553 ERKISKISNLKIQFHKNFGYYISINKSKVNLAPQHWIKRQTLTNEERYITSEIKNKENKI 612
Query: 454 QAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS--TCAPKPYVR 511
I+ + + I E+ I A T+ + ++ +A D L+ SI S KP +
Sbjct: 613 FQIKSRASSKEYEIFCELRNIVAEKTKQIRSIAKSIASLDALLGLSITSIENNFIKPLLI 672
Query: 512 PCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
P M S + R+PIVE L ++ ND+ F+ + ++TGPN GKS +IR
Sbjct: 673 PINDSMTKNSTKIIAGRNPIVEQLLSDKKFVANDISFEDNQ-KLIILTGPNASGKSCFIR 731
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
+G+ LAQIG FVP ++A I + D+IFTR+GA D Q G STFM+EM ETA+++ + T
Sbjct: 732 QLGLIQILAQIGSFVPANNAEIKIADRIFTRIGAVDDQSSGQSTFMVEMSETASILNQAT 791
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNV 690
NSLV++DE+GRGTSTFDG +A S++ LA Q T+FATH+HE+ L +N
Sbjct: 792 SNSLVLLDEIGRGTSTFDGLSIAWSVSEYLAKKIQCNTIFATHYHELNYLKNSNKNIQNF 851
Query: 691 QVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
QV + +D L+ +++ G KSYG+ AK+AG P++++E+A+ ++ E
Sbjct: 852 QVLVEQNDDQLIFSHRIVRGGSNKSYGIEAAKLAGVPKEVIEKAKSVLNSLE 903
>gi|297208058|ref|ZP_06924489.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|296887301|gb|EFH26203.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
Length = 872
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLVPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|389737228|ref|ZP_10190692.1| DNA mismatch repair protein MutS [Rhodanobacter sp. 115]
gi|388436700|gb|EIL93549.1| DNA mismatch repair protein MutS [Rhodanobacter sp. 115]
Length = 858
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 190/688 (27%), Positives = 328/688 (47%), Gaps = 61/688 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNK---NKIVTILD 146
G+A VDL + +F + E+P+ + L PAE L D K+V+ L
Sbjct: 144 GLAWVDLSSGRFLLSEVPN---------AEALAAELARLQPAETLVDENVAWPKLVSALP 194
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ R F + +++NR F +L + A CL + Y+E
Sbjct: 195 ----GLRKRPPWHFDADAAKRELNRF--FGTRDLGGFGVEGLSLAVAAAGCL---LGYVE 245
Query: 207 LMNNEDNMNQFSIHSIDY-SKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+ + S +++ S+ + + +A +L + S +T +LLG+LD TP
Sbjct: 246 -ETQKSALPHLSGMAVEAASETIALDAATRRNLEL---DTHPSGRTEHTLLGVLDETVTP 301
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G R L +W+ +PL+ D + RH A+ L+++ R LRG+ D++ + R+
Sbjct: 302 MGARALRRWLNRPLRSRDVLRGRHQAIGALIDSR--RYEPLRDQLRGVGDLERILARVAL 359
Query: 326 KKAGLKDCYRVYEGVSQLPKLIS--------ILESLVQNV-EASNLNTILSS--LQSLKM 374
+ A +D + +G+ P+L +L +LV+ + + + +L+S ++
Sbjct: 360 RSARPRDLSTLRDGLLAAPELRGHIKDLDSPLLHTLVERIGDHAETAALLASAVIEQPPA 419
Query: 375 MDRKDAVMDKMKEYLESTARRLNLVADK-TIKLE----------------NSPQGFAYRI 417
+ R V+ + RRL+ AD+ ++LE N G+ I
Sbjct: 420 LQRDGGVIADGYDAELDELRRLSTHADQYLVELEEREKASSGISALKVGYNRVHGYYIEI 479
Query: 418 TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
++ + YT T + R+ + L + + + ++++ E ++ +
Sbjct: 480 GKAHSDKVPTHYTRRQTTKNAERYITEELKQFEDKVLSAKERSLMRERALYEALLDLLIE 539
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGG 537
+ L Q + +A+ DVL + +A + P + + + + RHP+VE
Sbjct: 540 KLEPLKQAASAIAELDVLAT--LAERAEALDWSMPELT--DAPGIAIERGRHPVVEKVRD 595
Query: 538 VSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQ 597
+ PND+ + ++TGPNMGGKSTY+R + V LA IG +VP A I +D+
Sbjct: 596 EPFEPNDLMLGD-DRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPATRAAIGPIDR 654
Query: 598 IFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIA 657
IFTR+GA D RG STFM+EM ETA ++ TE SLV++DE+GRGTST+DG +A + A
Sbjct: 655 IFTRIGAGDDLSRGQSTFMVEMSETANILHNATEQSLVLMDEVGRGTSTYDGLSLARAAA 714
Query: 658 RELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYG 717
LA H + +TLFATH+ E+ L+ +P NV + A+E + LV ++ VK G +S+G
Sbjct: 715 VHLARHCRAYTLFATHYFELTELAAELPAIANVHLDAVEYGEQLVFMHAVKDGPANQSFG 774
Query: 718 VHCAKMAGYPEDMLEQARDLMKEYEYSL 745
+ A +AG P+ ++ AR + E E +
Sbjct: 775 LQVAALAGLPKAVIADARRTLAELERGM 802
>gi|123969386|ref|YP_001010244.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str.
AS9601]
gi|189083174|sp|A2BTM6.1|MUTS_PROMS RecName: Full=DNA mismatch repair protein MutS
gi|123199496|gb|ABM71137.1| putative DNA mismatch repair protein [Prochlorococcus marinus str.
AS9601]
Length = 913
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 177/599 (29%), Positives = 301/599 (50%), Gaps = 57/599 (9%)
Query: 191 LTTATHCLRSLINYLELMN--NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHV---LPQQG 245
L AT L L+NYLE +N N D + I S+D+ + + + ++ L +
Sbjct: 315 LNNATRSLGGLLNYLEKINPSNLDKDSSLKI-SLDFPQIQYGHNKLIIDYQTQKNLEIKN 373
Query: 246 STSAQTY-DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMN 304
+ Y SLL +DR T G R L +W+ PL +++ I +R + + + + R++
Sbjct: 374 TQRENNYVGSLLWSIDRTYTCMGARCLRRWIDSPLLNVNEIYKRQNIITNFLESKKLRID 433
Query: 305 LHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----------V 354
LR + D++ LA R A +D + EG+ +LP+L SI+E +
Sbjct: 434 TQNL-LRAMGDLERLAGRACAGHASPRDLIAIAEGLKKLPRLKSIIELFKYDLPDWTDQL 492
Query: 355 QNVEASNLNTILSSLQSLKMM--------------DRKDAVMDKMK-------EYL---E 390
+N++ L L+ S K++ D D ++D ++ E+L E
Sbjct: 493 KNIDEGLLE--LADTISFKLVENPPLNISEGGMIHDGVDNILDGLRNLMDDYSEWLNKEE 550
Query: 391 STARRLNLVADKTIKLENSPQGFAYRITMKLN--NSIDDRYTILDTVRGGVRFQDDRLAT 448
S R+++ +++ I+ + F Y I++ + N + T+ R+ +
Sbjct: 551 SKERKISKISNLKIQFH---KNFGYYISINKSKVNLAPQHWIKRQTLTNEERYITSEIKN 607
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+ I+ + + I E+ I A T+ + ++ +A D L+ SI T
Sbjct: 608 KENKIFQIKSRASSKEYEIFCELRNIVAEKTKQIRSIAKSIASLDALLGLSI--TSVENN 665
Query: 509 YVRPCMKP----MGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMG 563
+++P + P M S + R+PIVE L ++ ND+ F+ + ++TGPN
Sbjct: 666 FIKPSLIPINDSMTKNSTKIIAGRNPIVEQLLSDKKFVANDISFEDNQ-KLIILTGPNAS 724
Query: 564 GKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETA 623
GKS +IR +G+ L QIG FVP ++A I + D+IFTR+GA D Q G STFM+EM ETA
Sbjct: 725 GKSCFIRQLGLIQILTQIGSFVPANNAEIKIADRIFTRIGAVDDQSSGQSTFMVEMSETA 784
Query: 624 TVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV 683
+++ + T +SLV++DE+GRGTSTFDG +A S++ LA Q T+FATH+HE+ L
Sbjct: 785 SILNQATSSSLVLLDEIGRGTSTFDGLSIAWSVSEYLAKKIQCNTIFATHYHELNYLKNT 844
Query: 684 IPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+N QV + D L+ +++ G KSYG+ AK+AG P++++E+A+ ++ E
Sbjct: 845 NKNIQNFQVLVEQNNDQLIFSHRIVKGGSNKSYGIEAAKLAGVPKEVIEKAKSVLNSLE 903
>gi|300866162|ref|ZP_07110881.1| DNA mismatch repair protein mutS [Oscillatoria sp. PCC 6506]
gi|300335841|emb|CBN56041.1| DNA mismatch repair protein mutS [Oscillatoria sp. PCC 6506]
Length = 875
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 175/582 (30%), Positives = 290/582 (49%), Gaps = 52/582 (8%)
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGIL 259
L+ YLE E+++ +H+ S ++ + +L ++ Q + SLL +
Sbjct: 276 GLLEYLEETQKENSVPLEPLHTYALSDFLILDHQTRRNLEII--QTVRDGNFHGSLLWAI 333
Query: 260 DRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSL 319
D+ T G R L +W QPL D+ AI RH + LV N R +L + LR + D++ L
Sbjct: 334 DKTNTAMGGRALRRWFLQPLLDIKAIRARHDTIQELVENNSLRQSLQQL-LRQIYDIERL 392
Query: 320 AMRIGRKKAGLKDCYRVYEGVSQLPKLISI------------------LESLVQNVEASN 361
A R G A + + + + +LP+L ++ L+ L QN+ A
Sbjct: 393 AGRAGSGTATARQLVSLADSLEKLPQLANVALQGRSPYLKALQNVPPVLDKLGQNIHAYL 452
Query: 362 LNTILSSLQSLKM--------MDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSP 410
++ L+ + +DR + +++L E+T R +++ + N
Sbjct: 453 VDEPPIHLKEGGLIRPGINDELDRMRGMASGDQQWLANLEATERTRTGISNLKVGY-NKA 511
Query: 411 QGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSI--- 467
G+ IT + + Y T+ R+ + L + + + + I
Sbjct: 512 FGYYISITKSKIDQVPHDYIRKQTLTNEERYSTEELKEREIRILTAREDLNQLEYDIFTG 571
Query: 468 VEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQC 527
+ E +G A + + +S +A DVL +A Y RP M + + + + +
Sbjct: 572 LRESVGEQA---EVIRNISRAVAAADVLCG--LAEVAVYYGYCRPTM--VESREIKIVEG 624
Query: 528 RHPIVE--LQGGVSYIPNDVYFKSGEVSFN-----LVTGPNMGGKSTYIRSIGVSVFLAQ 580
RHP+VE L G ++PN + S E S N ++TGPN GKS Y+R +G+ +AQ
Sbjct: 625 RHPVVEKSLPAGF-FVPNSAFLGS-EESVNRPDLIILTGPNASGKSCYLRQVGLIQLMAQ 682
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
G FVP SA++ + ++IFTRVGA D G STFM+EM ETA ++ T SLV++DE+
Sbjct: 683 TGSFVPAKSASLGICNRIFTRVGAVDDLATGQSTFMVEMNETANILNHATPKSLVLLDEI 742
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGT+TFDG +A S+A LA+ + T+FATH+HE+ L+ ++P N QV+ E D
Sbjct: 743 GRGTATFDGLSIAWSVAEYLANEIRARTIFATHYHEMNELASILPNVANYQVTVKELPDQ 802
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++ L+QV+PG KSYG+ ++AG P ++E+AR +M++ E
Sbjct: 803 IIFLHQVQPGGADKSYGIEAGRLAGLPPSVIERARQVMRQIE 844
>gi|258452594|ref|ZP_05700600.1| DNA mismatch repair protein mutS [Staphylococcus aureus A5948]
gi|257859812|gb|EEV82654.1| DNA mismatch repair protein mutS [Staphylococcus aureus A5948]
Length = 872
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDALRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ QN + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 TQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY+ Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASAGKKS 792
>gi|206977880|ref|ZP_03238768.1| DNA mismatch repair protein MutS [Bacillus cereus H3081.97]
gi|217961190|ref|YP_002339758.1| DNA mismatch repair protein MutS [Bacillus cereus AH187]
gi|375285691|ref|YP_005106130.1| DNA mismatch repair protein MutS [Bacillus cereus NC7401]
gi|423353471|ref|ZP_17331098.1| DNA mismatch repair protein mutS [Bacillus cereus IS075]
gi|423374434|ref|ZP_17351772.1| DNA mismatch repair protein mutS [Bacillus cereus AND1407]
gi|423567336|ref|ZP_17543583.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-A12]
gi|226723053|sp|B7HLA3.1|MUTS_BACC7 RecName: Full=DNA mismatch repair protein MutS
gi|206743880|gb|EDZ55299.1| DNA mismatch repair protein MutS [Bacillus cereus H3081.97]
gi|217065927|gb|ACJ80177.1| DNA mismatch repair protein MutS [Bacillus cereus AH187]
gi|358354218|dbj|BAL19390.1| DNA mismatch repair protein MutS [Bacillus cereus NC7401]
gi|401089284|gb|EJP97455.1| DNA mismatch repair protein mutS [Bacillus cereus IS075]
gi|401094346|gb|EJQ02428.1| DNA mismatch repair protein mutS [Bacillus cereus AND1407]
gi|401214424|gb|EJR21154.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-A12]
Length = 892
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 279/544 (51%), Gaps = 48/544 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 337 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 396 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLK 455
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 515
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 516 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 566
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 567 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LITGPNMSGKSTYMRQLALVTV 625
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 626 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 685
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 686 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEE 745
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 746 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLITRAKEVLAQLEGQEEIIIPKRVEVKA 805
Query: 758 REEE 761
+ +E
Sbjct: 806 QAQE 809
>gi|452989141|gb|EME88896.1| hypothetical protein MYCFIDRAFT_25225 [Pseudocercospora fijiensis
CIRAD86]
Length = 1117
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 205/717 (28%), Positives = 337/717 (47%), Gaps = 84/717 (11%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+A VD T +F++ E DD + E + Q P E +L ++ + + IL N
Sbjct: 370 GIAFVDTATAQFHLAEWVDDADMTRFETFVAQTRPGELILEKGCIS---ARALRILKNNT 426
Query: 150 VCMTGRKKNEFSEEDLMQDVNRL--------VRFDDSELKNARLLPEMCLTTATH----- 196
T + +E L D R+ V+ +D E ++ P++ T
Sbjct: 427 PPTTIWNYLKPDKEFLSADKTRMKMNGEAYFVKSEDDEAADS--WPKVLREAETKENTFS 484
Query: 197 CLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTS----AQTY 252
+L+ YL ++ E ++ I ++S Y + A SSL VL Q + A T+
Sbjct: 485 AYGALVWYLSMLKIERDL----ITCANFSWYNPIRKA--SSL-VLDGQSLINLEIFANTF 537
Query: 253 D-----SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
D +L +L+RC TP G R L QW+ PL D I ER AV+ L N M+
Sbjct: 538 DGSTEGTLFTMLNRCVTPSGKRTLRQWVCHPLADARKINERFDAVDAL-NADGTVMDRFT 596
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVEA- 359
+L LPD++ L R+ + ++D +V EG Q+ +S+L S L Q + A
Sbjct: 597 ASLSRLPDLERLISRVHAGRCKVQDFVKVLEGFEQIEYTMSLLSSFGDGEGLLGQLISAM 656
Query: 360 SNLNTILSSLQSLKMMDRKDAV--------------MDKMKEYLESTARRLNLVADKTIK 405
NL T L+ + + DRK A D+ +E ++ + LN + + K
Sbjct: 657 PNLQTPLNHWK--EAFDRKQAKEQGLLIPQPGVEDDFDESQERVDGVEKELNKLLQRARK 714
Query: 406 ---------LENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAI 456
+N + + + +K+ +I + + + R+ L Q +
Sbjct: 715 DLGSSAIKFTDNGKEIYQLEVPIKVKGNIPKNWKQMSATKQCKRWYSPEL---EGLVQDL 771
Query: 457 QREYETHQQSIVEEVIG-----ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVR 511
+ E H Q +V+ + G YT L + ++ Q D L+S + AS+ P R
Sbjct: 772 KEAQEMHAQ-VVKALAGRFFARFDEDYTTWLAAIK-IIGQLDCLISLAKASSSLGSPSCR 829
Query: 512 P--CMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
P L RHP +E ++IPND+ + S L+TG N GKST +
Sbjct: 830 PEFIEDDHARSVLEFQTLRHPCIETT--TNFIPNDIALGGDQASITLLTGANAAGKSTIL 887
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R ++V LAQIGC+VPC+SA ++ VD+I +R+GA D+ + G STFM+E+ ET ++ +
Sbjct: 888 RMTCIAVILAQIGCYVPCESARMTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILAEA 947
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T SLVI+DELGRGTS++DG +A ++ +A+H FATH+H +A + P
Sbjct: 948 TPRSLVILDELGRGTSSYDGVAVAQAVLHHIATHVGSLGYFATHYHSLAAEFQKHPEVIA 1007
Query: 690 VQVSALEQED--NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYS 744
+++ +D ++ LY ++ G SYG+HCA M G P+ ++ +A + +E++
Sbjct: 1008 KRMAVKVDDDIRDVTFLYHLEDGVAEGSYGMHCAAMCGIPDKVITRAEQAAENWEHT 1064
>gi|229174434|ref|ZP_04301966.1| DNA mismatch repair protein mutS [Bacillus cereus MM3]
gi|228608994|gb|EEK66284.1| DNA mismatch repair protein mutS [Bacillus cereus MM3]
Length = 884
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 278/542 (51%), Gaps = 48/542 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLGQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETNN 757
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRTEVKV 799
Query: 758 RE 759
+E
Sbjct: 800 QE 801
>gi|379021006|ref|YP_005297668.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M013]
gi|418950189|ref|ZP_13502385.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-160]
gi|359830315|gb|AEV78293.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M013]
gi|375377562|gb|EHS81021.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-160]
Length = 872
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 286/568 (50%), Gaps = 58/568 (10%)
Query: 221 SIDYSK---YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQ 277
+IDY K Y + + S+ + ++G+ LL ++D +TP G R L QW+ +
Sbjct: 244 AIDYMKMDFYAKRNLELTESIRLKSKKGT--------LLWLMDETKTPMGARRLKQWIDR 295
Query: 278 PLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVY 337
PL + I R V+ + R L Y L + D++ L R+ +D ++
Sbjct: 296 PLISKEQIEARLDIVDEFSAHFIERDTLRTY-LNQVYDIERLVGRVSYGNVNARDLIQLK 354
Query: 338 EGVSQLPKLISILESLVQNV-----EASNLNTILSSLQSLKMMDRKDAVMD--------- 383
+S++P + ++L S+ Q+ + L+ +L L+ + + +V D
Sbjct: 355 HSISEIPNIKALLNSMNQDTLVHVNQLEPLDDLLDILEQSLVEEPPISVKDGGLFKVGFN 414
Query: 384 -KMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRIT-MKLNNSIDDRY 429
++ EYLE++ +A+ K++K+ N G+ IT L N +
Sbjct: 415 MQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKISFNKVFGYFIEITRANLQNFEPSEF 474
Query: 430 TIL--DTVRGGVRFQDDRLATA-----NTQYQAIQREYETHQQSIVEEVIGISAGYTQTL 482
+ T+ RF D L + +AI+ EY Q + EEV YT+ L
Sbjct: 475 GYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYLLFVQ-LREEV----KKYTERL 529
Query: 483 NQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYI 541
Q + ++++ D L SF A Y RP T LV + RHP+VE + Y+
Sbjct: 530 QQQAKIISELDCLQSF--AEIAQKYNYTRPSFSENKTLELV--ESRHPVVERVMDYNDYV 585
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
PN+ E L+TGPNM GKSTY+R + + +AQ+G +VPC A + + DQIFTR
Sbjct: 586 PNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTR 644
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GAAD G STFM+EM E + TE+SL+I DE+GRGTST+DG +A ++ +A
Sbjct: 645 IGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVA 704
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
TLF+TH+HE+ L + +P+ +NV V+A E + L+ L++VK G+ SYG+ A
Sbjct: 705 ETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVA 764
Query: 722 KMAGYPEDMLEQARDLMKEYEYSLDTKT 749
K+A PE ++ +A+ ++ E+E S D K+
Sbjct: 765 KLADLPEKVISRAQVILSEFEASADKKS 792
>gi|225872379|ref|YP_002753834.1| DNA mismatch repair protein MutS [Acidobacterium capsulatum ATCC
51196]
gi|225791956|gb|ACO32046.1| DNA mismatch repair protein MutS [Acidobacterium capsulatum ATCC
51196]
Length = 893
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 177/584 (30%), Positives = 295/584 (50%), Gaps = 60/584 (10%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L G LD C TP G RLL + +PL D + R+AAV+ + R + A+ G+
Sbjct: 306 TLFGALDECVTPMGKRLLRASILRPLMDAARLEARYAAVDAARQSLLGREAVRR-AMDGI 364
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------ESL--VQNVEA 359
D++ L +I + AG +D + + +LP+L S L E L ++++ +
Sbjct: 365 LDLERLLAKISLESAGPRDVLALGHSLGRLPELQSSLLQMGASWWKQTGEGLDRLEDLHS 424
Query: 360 SNLNTILSSLQSLKMMDRK------DAVMDKMKEYLESTARRLNLVADK--------TIK 405
+ TI++ L + D DA +D+++ S + + ++ ++K
Sbjct: 425 AIEKTIVAE-PPLTLADGGAIAEGVDAELDELRTISHSGRSSIAAIEERERQRTGIPSLK 483
Query: 406 LE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
+ NS G+ +T + Y T+ RF L + Q +
Sbjct: 484 VRFNSVFGYYIEVTKANLAHVPADYERKQTLVNAERFTTPELKDYEIKVLTAQDRSVEIE 543
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ I E+ + + + ++S ++A+ D+L SF A + + Y RP ++ L L
Sbjct: 544 KRIFAELRRLVLSHAARIRRVSVMIAEIDLLASF--AHLASLRGYTRPLLE--SEPVLEL 599
Query: 525 NQCRHPIVEL----QGGVSYIPNDVYFKSGEVS--------FNLVTGPNMGGKSTYIRSI 572
RHP++E G ++PND+Y + E + L+TGPNMGGKSTY+R
Sbjct: 600 IGARHPVIECLMERAGTTRFVPNDLYVDATEATPEAASAPHLLLITGPNMGGKSTYLRQA 659
Query: 573 GVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTEN 632
+ V LAQ+GCFVP + +VD+++TR+GA+D+ RG STFM+EM ETAT++ T
Sbjct: 660 ALLVILAQMGCFVPAERMRFGLVDRVYTRIGASDNVARGRSTFMVEMTETATILNTATVR 719
Query: 633 SLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQV 692
SL+++DE+GRGT+TFDG +A + L + TLFATH+HE+ +L+ +P N++V
Sbjct: 720 SLILLDEMGRGTATFDGLALAWATLEFLHAEVGARTLFATHYHELTMLAEQLPRLGNLRV 779
Query: 693 SALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
+ E +V L++++PG+ KSYG+ A++AG P ++++AR ++K++E S
Sbjct: 780 AVKESPKGIVFLHRMEPGAASKSYGIEVARLAGLPPRVIQRARQVLKQHERS-------- 831
Query: 753 DETNNREEEYFKTVQEGEYQMFDFL-QQCLSLSKQKDTNRILHL 795
E N E E +Q MF L QQ L + D N + L
Sbjct: 832 -ERGNVEAETAPALQ---MTMFTPLSQQILDRLTETDVNTLTPL 871
>gi|311030164|ref|ZP_07708254.1| DNA mismatch repair protein MutS [Bacillus sp. m3-13]
Length = 857
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 274/525 (52%), Gaps = 49/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ T G RLL QW+ +PL + I +RH V L+N R + E L+ +
Sbjct: 278 SLLWLLDQTVTAMGGRLLKQWVDRPLINPALIEQRHDMVETLINEFFTRQEIREL-LKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL-VQNV-------EASNLNTI 365
D++ LA R+ +D ++ + +SQ+P L +++E L ++N E L T+
Sbjct: 337 YDLERLAGRVAFGNVNARDLVQLRKSLSQIPHLKAMVEKLPIENASILDNMDECEELTTL 396
Query: 366 LS---------SLQSLKMMDRKDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
L S++ MM KD +++ +Y E R +L +++K
Sbjct: 397 LHDSLIEQPSLSVKEGNMM--KDGFHEELDKYRDARRNGKTWIAELEKRERDLTGIRSLK 454
Query: 406 LE-NSPQGFAYRITMKLNNSI-DDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ IT +S+ + RY T+ R+ + L T + + +
Sbjct: 455 IGYNRIFGYYIEITKANISSLPEGRYERKQTLANAERYITEELKEKETLILEAEEKIVAL 514
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EYE + + EEV Y L +L+ +++ DVL F A+ + Y RP
Sbjct: 515 EYELFLK-LREEV----KVYIPRLQKLAKAVSEIDVLQCF--ATISEDRYYTRPSFNE-- 565
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + Y+PND + E L+TGPNM GKSTY+R + ++
Sbjct: 566 ERKVYITDGRHPVVEKVMDANEYVPNDTWMDK-ENEMLLITGPNMSGKSTYMRQVALTAI 624
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LAQIGCFVP A++ + DQIFTR+GAAD G STFM+EM E I T+NSL++
Sbjct: 625 LAQIGCFVPAKEASLPIFDQIFTRIGAADDLISGQSTFMVEMLEARNAIVYATQNSLILF 684
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A ++ + TLF+TH+HE+ L + +N+ VS +EQ
Sbjct: 685 DEIGRGTSTYDGMALAQALIEYIHDKIGAKTLFSTHYHELTSLDEELKKLKNIHVSVVEQ 744
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L+++K G KSYG+H A++A P++++ +A+ ++++ E
Sbjct: 745 NGKVVFLHKMKEGPADKSYGIHVAELAELPKELIIRAQTILEKLE 789
>gi|307288398|ref|ZP_07568389.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0109]
gi|422704143|ref|ZP_16761958.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1302]
gi|306500630|gb|EFM69956.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0109]
gi|315164365|gb|EFU08382.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1302]
Length = 858
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 273/535 (51%), Gaps = 47/535 (8%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
Q + Q +LL +LD +T G RLL QW+ +PL I R V L+N R+
Sbjct: 269 QSIRTGQKKGTLLWLLDETKTAMGGRLLKQWLDRPLIQERQIKARQEMVQSLLNAYFERL 328
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
+L + AL + D++ LA R+ +D ++ + Q+P + ++ + Q E +L
Sbjct: 329 DL-QAALTNVYDLERLAGRVAFGSVNGRDLIQLRTSLEQVPTIRQLIVGINQG-EWDDLL 386
Query: 364 TILSSLQSLKMMDR-----------------KDAVMDKMKEYLESTARRLNLVADKTIK- 405
L+ ++ L ++ KD D++ EY ++ +A+ K
Sbjct: 387 VDLNPVEDLVVLIATAINEEAPLQITEGNVIKDGYNDQLDEYRDAMRNGKQWLAELEAKE 446
Query: 406 -----LENSPQG----FAYRITM---KLNNSIDDRYTILDTVRGGVRFQDDRLA-----T 448
++N G F Y I + L N + +Y T+ RF L
Sbjct: 447 RQETGIKNLKIGYNRVFGYFIEITKSNLANLEEGKYERKQTLANAERFITPELKELERLI 506
Query: 449 ANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKP 508
+ ++++ EY+ V E + + QTL + ++ DVL SF A+
Sbjct: 507 LEAEEKSVELEYQLFLA--VREQVKTNIDRLQTL---AKTISAVDVLQSF--ATISERYQ 559
Query: 509 YVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKST 567
YVRP ++ T +L + + RHP+VE + G YIPN + E L+TGPNM GKST
Sbjct: 560 YVRPTLRS-NTKNLAIVEGRHPVVEKVLGHQEYIPNSIRMNP-ETDILLITGPNMSGKST 617
Query: 568 YIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIK 627
Y+R + ++V +AQIGCFVP +SA + + DQIFTR+GA+D G STFM+EM E ++
Sbjct: 618 YMRQLALTVVMAQIGCFVPAESAEMPIFDQIFTRIGASDDLIAGQSTFMVEMMEANQALR 677
Query: 628 KCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTF 687
T NSL++ DELGRGT+T+DG +A +I + Q TLF+TH+HE+ +L +
Sbjct: 678 HATPNSLILFDELGRGTATYDGMALAQAIIEYIHREVQAKTLFSTHYHELTVLDETLKGL 737
Query: 688 RNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+N+ V A+E++ +V L+++ G KSYG+H AK+AG P +LE+A ++ E
Sbjct: 738 KNIHVGAVEKDGEVVFLHKMMEGPADKSYGIHVAKIAGLPSPLLERAATILSALE 792
>gi|23099086|ref|NP_692552.1| DNA mismatch repair protein MutS [Oceanobacillus iheyensis HTE831]
gi|44888208|sp|Q8CXG6.1|MUTS_OCEIH RecName: Full=DNA mismatch repair protein MutS
gi|22777314|dbj|BAC13587.1| DNA mismatch repair protein (mismatch recognition step)
[Oceanobacillus iheyensis HTE831]
Length = 867
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 290/554 (52%), Gaps = 60/554 (10%)
Query: 252 YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
+ SLL +LD+ T G R L +W+++PL I ER V + R +L + L+
Sbjct: 276 HGSLLWVLDKTVTAMGARTLKKWLERPLLSKQKINERLEVVQGFYDGFMERESLRDL-LK 334
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL------------------ESL 353
+ D++ L+ RI +D ++ + +S++P + L E +
Sbjct: 335 SVYDLERLSGRIAFGNVNARDLIQLKQSLSRIPAIQETLRQFDQPEITRLAEMLIYPEQM 394
Query: 354 VQNVEASNLNTILSSLQSLKMMDRKDAVMDKMKEYLESTARRLNLVAD-----------K 402
V+++E S ++ S++ ++ K+ D++ Y +++ +A +
Sbjct: 395 VESLEKSIVDEPPISIKEGSLI--KEGYHDQLDTYRDASRNGKKWIAQLEHQEREETGIR 452
Query: 403 TIKLE-NSPQGFAYRITM-KLNNSIDDRYTILDTVRGGVRFQDDRLATAN-----TQYQA 455
++K+ N G+ IT L+ + RY T+ RF ++ L + ++
Sbjct: 453 SLKVGYNRVFGYYIEITKPNLHLLPEGRYERRQTLTNAERFVNEELKEKEKLILEAEEKS 512
Query: 456 IQREYETHQQ---SIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRP 512
++ EY+ Q I EE+ + QL+ +++Q DVL SF A+ YVRP
Sbjct: 513 VELEYDLFIQIRDQIKEEI--------PLIQQLAHIISQMDVLQSF--ATVSESNNYVRP 562
Query: 513 CMKPMGTGSLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
L + + RHP+VE ++ G +++PNDV F + + L+TGPNM GKSTY+R
Sbjct: 563 ---DFNDEQLQVTKGRHPVVEQVMKDG-TFVPNDVVFDKSQ-NMLLITGPNMSGKSTYMR 617
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
+ ++ + QIGCF+P + AT+ V DQIFTR+GAAD G STFM+EM E I T
Sbjct: 618 QVALTSIMGQIGCFIPAEQATLCVFDQIFTRIGAADDLVSGQSTFMVEMLEARHAISNAT 677
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNV 690
+ SL+++DE+GRGTST+DG +A +I + + TLF+TH+HE+ L + +N+
Sbjct: 678 DRSLILLDEIGRGTSTYDGMALAQAIVEYIHHNIAAKTLFSTHYHELTALEDSLHHLKNI 737
Query: 691 QVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK-T 749
V A E E N+V L+Q+K G+ +SYG+H AK+A P +++E+A +++E E + K T
Sbjct: 738 HVRAEEHEGNVVFLHQIKEGAADQSYGIHVAKLADLPNELIERASVILEELEDDSNKKPT 797
Query: 750 PSGDETNNREEEYF 763
P+ D+ + + +F
Sbjct: 798 PTKDKLESGQLSFF 811
>gi|398864674|ref|ZP_10620206.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM78]
gi|398244792|gb|EJN30331.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM78]
Length = 859
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 279/540 (51%), Gaps = 67/540 (12%)
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
++L ++DRC+T G RLL +W+ +PL+DL ++ R ++ L++ R + L+
Sbjct: 290 NTLQSVVDRCQTAMGSRLLTRWLNRPLRDLTVLLARQTSITCLLDGY--RFEKLQPQLKE 347
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI------- 365
+ D++ + RIG + A +D R+ + + LP+L + + +EA +LN +
Sbjct: 348 IGDIERILARIGLRNARPRDLARLRDALGALPQL----QVAMSELEAPHLNQLAITTSTY 403
Query: 366 --LSSLQSLKMMDRKDAV--------------MDKMKEYLESTARRL-NLVADKTIKLE- 407
L++L ++D AV +D+++ E+ + L +L A + +
Sbjct: 404 PELAALLEKAIIDNPPAVIRDGGVLKTGYDSELDELQSLSENAGQFLIDLEAREKARTGL 463
Query: 408 -------NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLAT-----ANTQYQA 455
N G+ + K S Y T++G RF L + + +A
Sbjct: 464 SHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELKAFEDKALSAKSRA 523
Query: 456 IQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFS-----IASTCAPKPYV 510
+ RE ++ +++E++I L + LA+ DVL + + + C P+
Sbjct: 524 LAREKMLYE-ALLEDLIA----QLPPLQDTAAALAELDVLSNLAERALNLDLNC-PRFVS 577
Query: 511 RPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIR 570
PCM+ +NQ RHP+VE ++ ND+ ++TGPNMGGKSTY+R
Sbjct: 578 EPCMR--------INQGRHPVVEQVLTTPFVANDLSLDDN-TRMLVITGPNMGGKSTYMR 628
Query: 571 SIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCT 630
+ V LA IG FVP S +S+VD+IFTR+G++D G STFM+EM ETA ++ T
Sbjct: 629 QTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNAT 688
Query: 631 ENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNV 690
E SLV++DE+GRGTSTFDG +A + A LA H + +TLFATH+ E+ +L P NV
Sbjct: 689 ERSLVLMDEVGRGTSTFDGLSLAWAAAERLA-HLRAYTLFATHYFELTVLPEAQPLVANV 747
Query: 691 QVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTP 750
++A E + +V L+ V PG +SYG+ A++AG P +++ +AR+ + E DT P
Sbjct: 748 HLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPNEVIVRAREHLSRLE---DTALP 804
>gi|229098238|ref|ZP_04229185.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-29]
gi|229117255|ref|ZP_04246633.1| DNA mismatch repair protein mutS [Bacillus cereus Rock1-3]
gi|228666155|gb|EEL21619.1| DNA mismatch repair protein mutS [Bacillus cereus Rock1-3]
gi|228685136|gb|EEL39067.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-29]
Length = 884
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 168/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 784
>gi|309803573|ref|ZP_07697665.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
11V1-d]
gi|308164321|gb|EFO66576.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
11V1-d]
Length = 854
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 288/578 (49%), Gaps = 63/578 (10%)
Query: 220 HSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPL 279
S + ++Y+ MS V ++L ++ + + + + SL +LD+ T G RLL W+++PL
Sbjct: 245 QSYEPNQYLQMSHIVQTNLELI--KSTKTGKKMGSLFWLLDKTSTAMGGRLLKSWIERPL 302
Query: 280 KDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEG 339
L I R V L ++ +R + + L+G+ D++ L R+ A ++ ++ +
Sbjct: 303 ISLSEIKSRQLVVTALFDDYFSREKIIK-QLQGVYDLERLTGRVALGSANARELLQLADS 361
Query: 340 VSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR--------------------KD 379
++ +P++I+IL N + LN + LK + K
Sbjct: 362 LAVVPEIINILA----NSKNEVLNNFAQKIDPLKGIHDLIVKTIVENPPLSTKEGGIIKS 417
Query: 380 AVMDKMKEYLESTARRLNLVADKTIKLENSPQ----------------GFAYRITMKLNN 423
V ++ Y ++ +AD + NS + G+ +T N
Sbjct: 418 GVSSQLDRYRDAMINGKKWLAD----MANSEREKTGINNLRVGYNKVFGYYIEVTNSYKN 473
Query: 424 SID-DRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGISAG 477
+ DRY T+ R+ ++ Q + EYE ++ E++
Sbjct: 474 KVPLDRYMRKQTLTNAERYITVELKEHEALILEAQDYSTDLEYELFT-NLREDI----KK 528
Query: 478 YTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQG 536
Y L +L+ L+ DVL +FS+ S YV P + ++N RHP+VE +
Sbjct: 529 YIPALQKLAKQLSSLDVLATFSLLS--EQNNYVCPQFSQDSSAINIVN-GRHPVVEKVMS 585
Query: 537 GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVD 596
YIPNDV + + L+TGPNM GKSTY+R + + + +AQIGCF+P DSA + + D
Sbjct: 586 DEEYIPNDVKMDE-QTNIFLITGPNMSGKSTYMRQLALIIIMAQIGCFIPADSAVLPIFD 644
Query: 597 QIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSI 656
+IFTR+GA D G STFM+EM E +K T+ SL++ DE+GRGT+T+DG +A +I
Sbjct: 645 KIFTRIGAGDDLISGKSTFMVEMSEANIALKNATKRSLILFDEIGRGTATYDGMALAGAI 704
Query: 657 ARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSY 716
+ L TLFATH+HE+ L + + +N+ V A ++ +L+ L+++ PG+ +SY
Sbjct: 705 IKYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGHLIFLHKILPGAADQSY 764
Query: 717 GVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDE 754
G+H A++AG P +L +A ++K+ E + D + DE
Sbjct: 765 GIHVAQLAGLPTKVLREATHMLKQLEKNSDNQVAFSDE 802
>gi|88798289|ref|ZP_01113875.1| DNA mismatch repair protein [Reinekea blandensis MED297]
gi|88779065|gb|EAR10254.1| DNA mismatch repair protein [Reinekea sp. MED297]
Length = 862
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 262/520 (50%), Gaps = 41/520 (7%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L ++D C T G R L +W+ +PL+D D + +R AAV IL+++ R + L+ +
Sbjct: 290 TLFALMDHCSTAMGSRRLRRWLNRPLRDQDQLRQRQAAVAILLDDF--RFEQFQQHLKPI 347
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTILSSLQ 370
D++ + R+ + A +D R+ E ++ L S+LE+ NV S LN L
Sbjct: 348 GDIERVLARVALRSARPRDLIRLREALAAQTDLQSLLETCDNNVLQTLRSQLNVDPKWLD 407
Query: 371 SLKMMDRK----------------DAVMDKMK----------EYLESTARRLNLVADKTI 404
L+ R D +D+++ +E+T R N ++
Sbjct: 408 ELRSAIRDNPPVVIREGGVIAEGYDHELDELRGLDSNAADFLAEMETTER--NRTGLSSL 465
Query: 405 KLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
K+ N G+ I+ YT T++ RF L T + + +
Sbjct: 466 KVGYNRVHGYYIEISKAQAADAPVEYTRRQTLKNAERFITPELKTFEDKALSARSRALAR 525
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPK-PYVRPCMKPMGTGSL 522
++ + +E++ A L Q + L + DVLV+ + CA + + +P + L
Sbjct: 526 EKHLYDELVQKLAENLPGLQQFCEGLIELDVLVNLA---HCADRFDWNQPELTHQNI--L 580
Query: 523 VLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
+ RHP+VE ++PN S + ++TGPNMGGKSTY+R + + L IG
Sbjct: 581 TIEGGRHPVVEALNDTPFVPNSTQLSS-DCRMQIITGPNMGGKSTYMRQVALIALLGCIG 639
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
FVP D A I +D+IFTR+G++D G STFM+EM ETA ++ T NSLVI+DE+GR
Sbjct: 640 SFVPADRAVIGPLDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATPNSLVIMDEVGR 699
Query: 643 GTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLV 702
GTSTFDG +A + A +L S Q TLFATH+ E+ L +NV + A E +D LV
Sbjct: 700 GTSTFDGLSLAWASAEQLVSQVQALTLFATHYFEMTTLGETENAVQNVHLDATEHDDRLV 759
Query: 703 LLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L++V+ G +SYG+ AK+AG PE ++ +AR + E E
Sbjct: 760 FLHRVQEGPASQSYGIQVAKLAGVPETVITRARQRLAELE 799
>gi|302871703|ref|YP_003840339.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
gi|302574562|gb|ADL42353.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
Length = 863
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 268/522 (51%), Gaps = 38/522 (7%)
Query: 253 DSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRG 312
+SLLGILD+ +T G RLL +W+++PL D+ I R +V L ++ + + E R
Sbjct: 277 NSLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKSSYSILVQIEELLSR- 335
Query: 313 LPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNV------EASNLNTIL 366
+ D++ L+ + K KD + + LP L +L S + + L I
Sbjct: 336 MYDIERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSFSAQLLKEIYEDFDTLEDIH 395
Query: 367 SSLQS---------LKM-----------MDRKDAVMDKMKEYL-ESTARRLNLVADKTIK 405
S + S LK +DR + KE L + + NL K ++
Sbjct: 396 SLIDSSINEDAPVTLKECGIIKDGFNEEVDRLRNISKNSKELLVQYEEKERNLTGIKNLR 455
Query: 406 LE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQ-YQAIQREYETH 463
+ N G+ +T + + DRY T+ R+ + L + A Q+ E
Sbjct: 456 IGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLANAERYVTEELKKLEDEILGADQKLIELE 515
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q E I A + + + + +A DVL SF A YVRP + +G +
Sbjct: 516 YQLFCEIRDRIEAQ-IERIQKTASYIAILDVLCSF--ARIAIDNEYVRPNVY-LG-DKIY 570
Query: 524 LNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIG 582
+ RHP+VE + G ++IPND E ++TGPNM GKSTY+R + + V +AQ+G
Sbjct: 571 IKNGRHPVVEKMIGRGNFIPNDTELDQVENRVLIITGPNMAGKSTYMRQVALIVIMAQMG 630
Query: 583 CFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGR 642
CFVP D A I +VD+IF+R+GA+D G STFM+EM E A ++K T SL+I DE+GR
Sbjct: 631 CFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMSEVANILKNATPKSLIIFDEVGR 690
Query: 643 GTSTFDGFGMACSIARELASHRQ--PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GTST+DG +A ++ +A + TLFATH+HE+ L IP +N +V E+ N
Sbjct: 691 GTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEEKIPGVKNYRVDVKEEGKN 750
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L ++ G C SYG+H A++AG PE++L++A +++K+ E
Sbjct: 751 VVFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLE 792
>gi|322513151|ref|ZP_08066283.1| DNA mismatch repair protein MutS [Actinobacillus ureae ATCC 25976]
gi|322121083|gb|EFX92906.1| DNA mismatch repair protein MutS [Actinobacillus ureae ATCC 25976]
Length = 864
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 203/697 (29%), Positives = 342/697 (49%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+ S+ EA+ + + L PAE L IL+ K
Sbjct: 142 AIATLDMASGRFLITEL------SSKEALAAEL---QRLQPAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S + + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTILLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QQEQRIEQLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D R+ ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTRLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLERAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
L + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 LQLAAMALSELDVLTN--LAERAESLNYVRPIFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TENSLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KRTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
>gi|229104333|ref|ZP_04235002.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-28]
gi|407706174|ref|YP_006829759.1| phosphatidate cytidylyltransferase [Bacillus thuringiensis MC28]
gi|228679031|gb|EEL33239.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-28]
gi|407383859|gb|AFU14360.1| DNA mismatch repair protein mutS [Bacillus thuringiensis MC28]
Length = 884
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/525 (32%), Positives = 273/525 (52%), Gaps = 48/525 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + + ER V VN+ R +L E L+ +
Sbjct: 272 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKE-KLKEV 330
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L +SL
Sbjct: 331 YDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAI-SLLDNAYAARLIQGADPCESLT 389
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
+++ R KD DK+ +Y E R ++ K++K
Sbjct: 390 ELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGVKSLK 449
Query: 406 LE-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQR 458
+ N G+ +T L + RY T+ RF D L T + + +Q
Sbjct: 450 IGYNRIFGYYIEVTKANLAALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQL 509
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 510 EYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEEQFVKPVLTT-- 560
Query: 519 TGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 561 KREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LITGPNMSGKSTYMRQLALVTV 619
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
++QIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 620 MSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILF 679
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E+
Sbjct: 680 DEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLDQLKNVHVSAIEE 739
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E
Sbjct: 740 NGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLE 784
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,873,774,443
Number of Sequences: 23463169
Number of extensions: 488080774
Number of successful extensions: 1388720
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8963
Number of HSP's successfully gapped in prelim test: 1438
Number of HSP's that attempted gapping in prelim test: 1357928
Number of HSP's gapped (non-prelim): 15866
length of query: 813
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 662
effective length of database: 8,816,256,848
effective search space: 5836362033376
effective search space used: 5836362033376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)