BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5289
(813 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P43246|MSH2_HUMAN DNA mismatch repair protein Msh2 OS=Homo sapiens GN=MSH2 PE=1 SV=1
Length = 934
Score = 566 bits (1459), Expect = e-160, Method: Compositional matrix adjust.
Identities = 328/870 (37%), Positives = 486/870 (55%), Gaps = 106/870 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
Query: 744 -----SLDTKTPSGDETNNREEEYFKTVQE 768
D P+ + E+ K +QE
Sbjct: 857 IGESQGYDIMEPAAKKCYLEREQGEKIIQE 886
>sp|Q5XXB5|MSH2_CHLAE DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops GN=MSH2
PE=2 SV=1
Length = 933
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 323/840 (38%), Positives = 478/840 (56%), Gaps = 101/840 (12%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG K L++V
Sbjct: 19 FVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ I+ R + +T RKK +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R L
Sbjct: 317 VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------LVQNVE 358
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE L+ V
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVF 436
Query: 359 ASNLNTILSSLQSLKMMDRKDAVMD-----------------------------KMKEYL 389
+ L + S + M MD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 ISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q +++IPND+YF+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL---MKEYEY 743
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P+ ++E A+ ++E++Y
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 856
>sp|P54275|MSH2_RAT DNA mismatch repair protein Msh2 OS=Rattus norvegicus GN=Msh2 PE=2
SV=1
Length = 933
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/874 (37%), Positives = 491/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+ F+R +FY HGEDA L R+ ++K MG KTL+TV
Sbjct: 19 FVRFFEGMPEKPSTTVGLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKTLQTV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRHYRVEVYKNKAGNKASKENDWYLAYKASPGNLSQFEDILFGN 138
Query: 76 SEDKT--------LETV-LTNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ T L TV VGV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMATSIGIMGIKLSTVDGQRQVGVGDVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CILPGGETAGDMGKLRQVIQRGGILITERKRIDFSTKDIYQDLNRLLKGRKGEQMNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL L++C+T QG RL++QW+KQPL D + I ER V V ++E R L
Sbjct: 317 VEDTTGSQSLAAFLNKCKTAQGQRLVSQWIKQPLMDKNRIEERLNLVEAFVEDSELRRAL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+GV QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVKQLPNVIQALEKYQGRHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMD----KMKEYL 389
++ L L+ MD+ + VMD KM+ L
Sbjct: 437 VTPLTDLRSDFSKFQEKIETTLDMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + L
Sbjct: 497 ISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSEL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ N +Y + EYE Q +IV+E++ IS+GY + + ++DVLA D +VSF+ S AP
Sbjct: 557 SSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTVNDVLAHLDAVVSFAHVSNAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G +++ RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGKGRIIVKASRHACVEVQHDVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A++ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATNIGAFCMFATHFHELTALASQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKTGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQS 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
T G DET + ++GE + +FL +
Sbjct: 857 IGTSQGHDETQPAAKRRCLEREQGEKIILEFLSK 890
>sp|Q3MHE4|MSH2_BOVIN DNA mismatch repair protein Msh2 OS=Bos taurus GN=MSH2 PE=2 SV=1
Length = 934
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 330/874 (37%), Positives = 491/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKD-KTLETV 58
F FF P+K TT+R F+R +FY H EDA L R+ +VK MG KTLE+V
Sbjct: 19 FVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMGPAGAKTLESV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCV- 74
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKASPGNLSQFEDILFGN 138
Query: 75 --ISEDKTLETVLTNTV------GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
+S + V +TV GV VD +K + E PD+D +SNLEA+++Q PKE
Sbjct: 139 NDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C++P + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ +L
Sbjct: 199 CVMPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLKGKKGEQVNSAVL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
+ SL +L++C+TPQG RL+ QW+KQPL D + I ER V V + E R NL
Sbjct: 317 VEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQNL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQALFLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMD----KMKEYL 389
++ L L+ MD+ + +MD KM+ L
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLEKKMQSTL 496
Query: 390 ESTARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
S AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + +L
Sbjct: 497 VSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
+ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLAQ D +VSF+ S AP
Sbjct: 557 TSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSDAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+ A +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++E A+ E E +
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKALELEEFQN 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
P DE + + ++GE + +FL +
Sbjct: 857 IGKPQECDEMEPAAKRCYLEREQGEKIIQEFLSK 890
>sp|P43247|MSH2_MOUSE DNA mismatch repair protein Msh2 OS=Mus musculus GN=Msh2 PE=2 SV=1
Length = 935
Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/874 (37%), Positives = 491/874 (56%), Gaps = 99/874 (11%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMG-QKDKTLETV 58
F FF P+K TT+R F+R +FY HGEDA L R+ ++K MG KTL++V
Sbjct: 19 FVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGSKTLQSV 78
Query: 59 LVNK-------------------------------------------SNLSCFSHILCVI 75
+++K NLS F IL
Sbjct: 79 VLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENEWYLAFKASPGNLSQFEDILFGN 138
Query: 76 SEDKTLETVL---------TNTVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKE 126
++ V+ VGV VD +K + E P++D +SNLEA+++Q PKE
Sbjct: 139 NDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNLEALLIQIGPKE 198
Query: 127 CLLPAEYLNDNKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLL 186
C+LP + K+ ++ R + +T RK+ +FS +D+ QD+NRL++ E N+ L
Sbjct: 199 CVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLKGKKGEQINSAAL 258
Query: 187 PEMCLTTATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGS 246
PEM A L ++I +LEL++++ N QF + + D+S+Y+ + A + +L++ QGS
Sbjct: 259 PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAAVRALNLF--QGS 316
Query: 247 TSAQT-YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNL 305
T SL +L++C+T QG RL+ QW+KQPL D + I ER V V ++E R +L
Sbjct: 317 VEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEAFVEDSELRQSL 376
Query: 306 HEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI 365
E LR PD+ LA + R+ A L+DCYR+Y+G++QLP +I LE +A L
Sbjct: 377 QEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYEGRHQALLLAVF 436
Query: 366 LSSLQSLKM--------------MDRKD------------------AVMDKMKEYLEST- 392
++ L L+ MD+ + VMD +++ ++ST
Sbjct: 437 VTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQSTL 496
Query: 393 ---ARRLNLVADKTIKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRL 446
AR L L K IKL++S Q G+ +R+T K + + ++ +D + GV+F + L
Sbjct: 497 INAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSEL 556
Query: 447 ATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAP 506
++ N +Y + EYE Q +IV+E++ IS+GY + + L+DVLA D +VSF+ S AP
Sbjct: 557 SSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAHLDAIVSFAHVSNAAP 616
Query: 507 KPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKS 566
PYVRP + G G ++L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKS
Sbjct: 617 VPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKS 676
Query: 567 TYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVI 626
TYIR GV V +AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA+++
Sbjct: 677 TYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASIL 736
Query: 627 KKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPT 686
+ T++SL+IIDELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT
Sbjct: 737 RSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFATHFHELTALANQIPT 796
Query: 687 FRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLD 746
N+ V+AL E+ L +LYQVK G C +S+G+H A++A +P ++ A+ E E +
Sbjct: 797 VNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIACAKQKALELEEFQN 856
Query: 747 TKTPSG-DETNNREEEYFKTVQEGEYQMFDFLQQ 779
T G DE + ++GE + +FL +
Sbjct: 857 IGTSLGCDEAEPAAKRRCLEREQGEKIILEFLSK 890
>sp|P43248|MSH2_DROME DNA mismatch repair protein spellchecker 1 OS=Drosophila
melanogaster GN=spel1 PE=3 SV=4
Length = 917
Score = 539 bits (1388), Expect = e-152, Method: Compositional matrix adjust.
Identities = 307/822 (37%), Positives = 474/822 (57%), Gaps = 93/822 (11%)
Query: 10 QKSKTTIRFFNRVEFYCVHG-EDAELIQR---KSNVVYLVKTMGQKDKTLETVLVNKSNL 65
+K TT+RFF+ + Y VHG +D EL+ + KS K +TL+ V ++K N
Sbjct: 33 EKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGALLPDDKKETLQFVSMSKGNF 92
Query: 66 SCFSHILCVI-----------SEDKTLE--------------------TVLTNT------ 88
L ++ S D +E ++ N+
Sbjct: 93 ELAVRELLLVRNYRVEVYVKNSSDWEIEYRGSPGNLLQFEDILFSNKEVLVGNSIISLLV 152
Query: 89 ---------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN 139
VGVA V+ + KF + E DDD+++ LEA +V PKECLLP+ + +
Sbjct: 153 KLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEATVVLLGPKECLLPS--IEGEYS 210
Query: 140 KIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLR 199
+ T+LDRN V +T KK+ + DL+QD+NRL+RF + ++A L E+ L A++ L+
Sbjct: 211 AVKTLLDRNGVMITMPKKS--GDNDLLQDLNRLLRFAKGQQEDATGLKELQLQLASNALK 268
Query: 200 SLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQG---STSAQTYDSLL 256
+ I YL+L+N+ N+ + I +D +++VH+ SA +++L+++P+ G S + + S+L
Sbjct: 269 TAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLDSAAVAALNIMPKPGTHPSMPSYRWQSVL 328
Query: 257 GILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDM 316
G+LD CRTPQGHRL+ QW+KQPL+ + + +RH V L+ + + L L+ +PD+
Sbjct: 329 GVLDHCRTPQGHRLMGQWVKQPLRSRNILNDRHNIVQCLLESPDTMETLSLDYLKRIPDI 388
Query: 317 QSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL----VQNVEASNLNTILSSLQSL 372
L ++ R+KA L+D +R+Y+ + + PK++ +L L +++V + + L L L
Sbjct: 389 LMLTKKLMRRKANLQDLFRIYQVILRTPKILKVLHELDNSTIESVICAPFKSFLKDLTGL 448
Query: 373 KMM----------DRKDAVM-------------------DKMKEYLESTARRLNLVADKT 403
K M +R + ++ KM+E ++ LNL
Sbjct: 449 KQMVEQVVDFEAIERGEYLVKASFDSRLMELQQMMTELYSKMEELQFKCSQELNLDGKNQ 508
Query: 404 IKLENSPQ-GFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
+KLE+ + G +RIT+K ++ + + Y I+D ++GGVRF D+L ++ + + Y
Sbjct: 509 VKLESVAKLGHHFRITVKDDSVLRKNKNYRIVDVIKGGVRFTSDKLEGYADEFASCRTRY 568
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
E Q SIVEE+I ++ GY L L++ LAQ D LVSF+IA+ AP PYVRP M G
Sbjct: 569 EEQQLSIVEEIIHVAVGYAAPLTLLNNELAQLDCLVSFAIAARSAPTPYVRPKMLEEGAR 628
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
LVL RHP +ELQ V++I N V FK E + ++TGPNMGGKSTYIRS+G +V +A
Sbjct: 629 ELVLEDVRHPCLELQEHVNFIANSVDFKKEECNMFIITGPNMGGKSTYIRSVGTAVLMAH 688
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
IG FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVIIDEL
Sbjct: 689 IGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDEL 748
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDN 700
GRGTST++G G+A SIA LA + FTLFATHFHEI L+ + T +N ++A+ D+
Sbjct: 749 GRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLSTVKNCHMAAVADADD 808
Query: 701 LVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
LLYQV+ G KS+G+ A++A +PE +++ A+++ E+E
Sbjct: 809 FTLLYQVRSGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFE 850
>sp|O13396|MSH2_NEUCR DNA mismatch repair protein msh-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=msh-2 PE=3 SV=1
Length = 937
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/736 (35%), Positives = 395/736 (53%), Gaps = 78/736 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVT 143
TVGV D ++ + E D+D YSN EA+++Q KEC++ + K+ K+
Sbjct: 150 TVGVCFADASVRELGVSEFLDNDLYSNFEALLIQLGVKECIVTQDKGEKEKDPELAKLRQ 209
Query: 144 ILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLIN 203
I+D V + R EF +D+ QD++RL++ + + A LLP+ L A +LI
Sbjct: 210 IIDNCGVAIAERSAGEFGTKDIEQDLSRLLK----DERAASLLPQTDLKLAMGSASALIK 265
Query: 204 YLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCR 263
YL ++++ N Q+ ++ D ++++ + +A + +L+++P G+ SL G+L+ C+
Sbjct: 266 YLGILHDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMP--GARDGAKNMSLYGLLNHCK 323
Query: 264 TPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRI 323
TP G RLL+QW+KQPL + + I +R V N+TE R ++ E LR +PD+ L+ R
Sbjct: 324 TPVGSRLLSQWLKQPLMNAEEIEKRQQLVEAFANDTELRQSMQEEHLRSIPDLYRLSKRF 383
Query: 324 GRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI-----------LSSLQ-- 370
R KA L+D R Y+ V +LP I LE ++ L+ + L LQ
Sbjct: 384 QRGKATLEDVVRAYQVVIRLPGFIGTLEGVMDEAYRDPLDEVYTNKLRELSDSLVKLQEM 443
Query: 371 -----------------------SLKMMDRK-DAVMDKMKEYLESTARRLNLVADKTIKL 406
SL+++ +K D + M A L +K I L
Sbjct: 444 VETTVDLDALDNHEFIIKPEFDDSLRIIRKKLDRLRTDMDNEFAEAAEDLGQEREKKIFL 503
Query: 407 ENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETH 463
EN G+ R+T I + RY T + GV F L ++ + + Y
Sbjct: 504 ENHKVHGWCMRLTRTEAGCIRNNSRYLECSTQKNGVYFTTKTLQALRREFDQLSQNYNRT 563
Query: 464 QQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV 523
Q S+V EV+G++A Y L +L+ VLA DV+VSF+ S AP YVRP + P GTG V
Sbjct: 564 QSSLVNEVVGVAASYCPVLERLAAVLAHLDVIVSFAHCSVHAPISYVRPKIHPRGTGRTV 623
Query: 524 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
L + RHP +E+Q V++I NDV + SF ++TGPNMGGKSTYIR IGV +AQIGC
Sbjct: 624 LTEARHPCMEVQDDVTFITNDVTLTREDSSFLIITGPNMGGKSTYIRQIGVIALMAQIGC 683
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FVPC SA +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+IIDELGRG
Sbjct: 684 FVPCSSAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRG 743
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSA--------- 694
TST+DGFG+A +I+ + F LFATHFHE+ L+ P +N+ V+A
Sbjct: 744 TSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTALADQYPNVKNLHVTAHISGTDTDT 803
Query: 695 ---------LEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSL 745
+++ + LLY+V+PG C +S+G+H A++ +P+ ++ A+ E E
Sbjct: 804 DVITDEDEKAKKKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE--- 860
Query: 746 DTKTPSGDETNNREEE 761
D T+ EEE
Sbjct: 861 -------DFTSKHEEE 869
Score = 40.8 bits (94), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 1 HKFYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKT 54
H F F+ PQ + IR F+R ++Y HG+DA I R +++ +G+ D T
Sbjct: 13 HGFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVIRQLGRSDHT 69
>sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana GN=MSH2
PE=1 SV=1
Length = 937
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 282/871 (32%), Positives = 453/871 (52%), Gaps = 115/871 (13%)
Query: 15 TIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVLVNKSNLSCFSHILC 73
+RFF+R ++Y HGE++ I + + ++ +G L +V ++++ + L
Sbjct: 37 AVRFFDRKDYYTAHGENSVFIAKTYYHTTTALRQLGSGSNALSSVSISRNMFETIARDLL 96
Query: 74 VISEDKTLE-------------------------TVLTN--------------------- 87
+ D T+E + N
Sbjct: 97 LERNDHTVELYEGSGSNWRLVKTGSPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRC 156
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNK-IVTILD 146
+G+A VDL + + E DD ++NLE+ ++ KEC+ PAE N+ K + L+
Sbjct: 157 VIGMAYVDLTRRVLGLAEFLDDSRFTNLESSLIALGAKECIFPAESGKSNECKSLYDSLE 216
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R V +T RKK+EF DL D+ RLV+ + +++ L+ L AT L +L+++ E
Sbjct: 217 RCAVMITERKKHEFKGRDLDSDLKRLVKGNIEPVRD--LVSGFDL--ATPALGALLSFSE 272
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDR-CRTP 265
L++NEDN F+I D ++ + SA M +L+V+ + T A SL G+++R C
Sbjct: 273 LLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALNVM--ESKTDANKNFSLFGLMNRTCTAG 330
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL W+KQPL DL+ I R V V R +L ++ L+ + D++ L + R
Sbjct: 331 MGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAGLRQDLRQH-LKRISDVERLLRSLER 389
Query: 326 KKAGLKDCYRVYEGVSQLP-----------------------------------KLISIL 350
++ GL+ ++Y+ +LP K I ++
Sbjct: 390 RRGGLQHIIKLYQSTIRLPFIKTAMQQYTGEFASLISERYLKKLEALSDQDHLGKFIDLV 449
Query: 351 ESLVQNVEASNLNTILSS-----LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIK 405
E V + N ++SS L SLK D+K+ + ++ E + TA L+L DK +K
Sbjct: 450 ECSVDLDQLENGEYMISSSYDTKLASLK--DQKELLEQQIHELHKKTAIELDLQVDKALK 507
Query: 406 LENSPQ-GFAYRITMK----LNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREY 460
L+ + Q G +RIT K + + ++ +L+T + GV+F + +L QYQ++ +Y
Sbjct: 508 LDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVVDDY 567
Query: 461 ETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTG 520
+ Q+ +V+ V+ +++ L+ +L++ DVL+SF+ + P PY RP + G
Sbjct: 568 RSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSFADLAASCPTPYCRPEITSSDAG 627
Query: 521 SLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 580
+VL RHP VE Q V++IPND G+ F +VTGPNMGGKST+IR +GV V +AQ
Sbjct: 628 DIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVTGPNMGGKSTFIRQVGVIVLMAQ 687
Query: 581 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 640
+G FVPCD A+IS+ D IF RVGA D Q RG+STFM EM ETA+++K ++ SL+IIDEL
Sbjct: 688 VGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDEL 747
Query: 641 GRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRV-------IPTFRNVQVS 693
GRGTST+DGFG+A +I L ++ TLFATHFHE+ L++ N VS
Sbjct: 748 GRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELTALAQANSEVSGNTVGVANFHVS 807
Query: 694 A-LEQED-NLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE-YSLDTKTP 750
A ++ E L +LY+V+PG+C +S+G+H A+ A +PE ++ AR+ E E +S +
Sbjct: 808 AHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSSMII 867
Query: 751 SGDETNNRE--EEYFKTVQEGEYQMFDFLQQ 779
+ +E+ R+ E+ V G + FL++
Sbjct: 868 NNEESGKRKSREDDPDEVSRGAERAHKFLKE 898
>sp|P25847|MSH2_YEAST DNA mismatch repair protein MSH2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MSH2 PE=1 SV=2
Length = 964
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 259/775 (33%), Positives = 425/775 (54%), Gaps = 87/775 (11%)
Query: 89 VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKN----KIVTI 144
+GVA +D K M +I D++ YSNLE+ ++Q KECL+ N N N K++ +
Sbjct: 157 IGVAFIDTTAYKVGMLDIVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINV 216
Query: 145 LDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINY 204
+DR +T K +EFSE+D+ D+ +L+ DD L LP+ + +LI Y
Sbjct: 217 IDRCGCVVTLLKNSEFSEKDVELDLTKLLG-DDLALS----LPQKYSKLSMGACNALIGY 271
Query: 205 LELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQ-------------QGSTSAQT 251
L+L++ +D + ++ + +++ + ++ + +L++ PQ G TSA
Sbjct: 272 LQLLSEQDQVGKYELVEHKLKEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGN 331
Query: 252 ---YDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEY 308
SL +L+ C+T G RLL +W+KQPL ++D I +RH V+ L++ E R L
Sbjct: 332 SGKVTSLFQLLNHCKTNAGVRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSE 391
Query: 309 ALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILES-------------LVQ 355
L +PD++ L ++ K+ L+D ++Y+ ++P+++ + S LV+
Sbjct: 392 YLPMIPDIRRLTKKLN-KRGNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVNELVR 450
Query: 356 NVEASNLNTILSSLQSL------------------------------KMMDRKDAVMDKM 385
+V + L+ + L K+ + D + D++
Sbjct: 451 SVWLAPLSHHVEPLSKFEEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDTLRDEI 510
Query: 386 KEYLESTARRLNLVADKTIKLENSP-QGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQ 442
+A L DK +KLEN G+ R+T + +Y L TV+ G+ F
Sbjct: 511 HSIHLDSAEDLGFDPDKKLKLENHHLHGWCMRLTRNDAKELRKHKKYIELSTVKAGIFFS 570
Query: 443 DDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS 502
+L + + +Q+EY+ Q ++V E+I I+ YT +LS VLA DV+ SF+ S
Sbjct: 571 TKQLKSIANETNILQKEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTS 630
Query: 503 TCAPKPYVRPCMKPMGTGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPN 561
+ AP PY+RP + PM + L RHP++E+Q +S+I NDV +SG+ F ++TGPN
Sbjct: 631 SYAPIPYIRPKLHPMDSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPN 690
Query: 562 MGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKE 621
MGGKSTYIR +GV +AQIGCFVPC+ A I++VD I RVGA DSQ +G+STFM+E+ E
Sbjct: 691 MGGKSTYIRQVGVISLMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILE 750
Query: 622 TATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLS 681
TA+++K ++NSL+I+DELGRGTST+DGFG+A +IA +AS F LFATHFHE+ LS
Sbjct: 751 TASILKNASKNSLIIVDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELS 810
Query: 682 RVIPTFRNVQVSA-LEQ--------EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLE 732
+P +N+ V A +E+ ++++ LLY+V+PG +S+G+H A++ +PE +++
Sbjct: 811 EKLPNVKNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVK 870
Query: 733 QARDLMKEYEYSLDTKTPSGDETNNREEEYFKTVQEGEYQMFDFLQQCLSLSKQK 787
A+ E + D KT +E + + + V EG ++ L++ + K++
Sbjct: 871 MAKRKANELD---DLKT--NNEDLKKAKLSLQEVNEGNIRLKALLKEWIRKVKEE 920
>sp|Q9XGC9|MSH2_MAIZE DNA mismatch repair protein MSH2 OS=Zea mays GN=MUS1 PE=3 SV=1
Length = 942
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 277/905 (30%), Positives = 453/905 (50%), Gaps = 122/905 (13%)
Query: 3 FYLFF--FPQKSKTTIRFFNRVEFYCVHGEDAELIQRKS-NVVYLVKTMGQKDKTLETVL 59
F FF PQ + +R F+R ++Y HGE+A I R + + ++ +G + +
Sbjct: 26 FISFFKKLPQDPRA-VRLFDRRDYYTAHGENATFIARTYYHTMSALRQLGSSSDGILSAS 84
Query: 60 VNKSNLSCFSHILCVISEDKTLETV--------LTNT----------------------- 88
V+K+ + + + D TLE LT +
Sbjct: 85 VSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGTPGNIGSFEDILFANNDMEDSP 144
Query: 89 ---------------VGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEY 133
VG++ +D+ +K + E P+D ++N+E+ +V KECLLPA+
Sbjct: 145 VIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDSRFTNVESALVALGCKECLLPADC 204
Query: 134 LND-NKNKIVTILDRNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLT 192
+ N + ++ V +T +KK +F DL QD+ R++R +++ LL +
Sbjct: 205 EKSIDLNPLQDVISNCNVLLTEKKKADFKSRDLAQDLGRIIRGSVEPVRD--LLSQ--FD 260
Query: 193 TATHCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY 252
A L +L++Y EL+ ++ N ++I + + Y+ + SA + +L++ +G T
Sbjct: 261 YALGPLGALLSYAELLADDTNYGNYTIEKYNLNCYMRLDSAAVRALNI--AEGKTDVNKN 318
Query: 253 DSLLGILDR-CRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALR 311
SL G+++R C G RLL +W+KQPL D++ I R V V + E R L + L+
Sbjct: 319 FSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPELRQGLRQ-QLK 377
Query: 312 GLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLP--------------------------- 344
+ D+ L + +K A L+ ++Y+ S++P
Sbjct: 378 RISDIDRLTHSLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQFSTLIRSKFLEPLEE 437
Query: 345 --------KLISILESLVQNVEASNLNTILSSLQSLKMMDRKD---AVMDKMKEYLESTA 393
+ S++E+ + + N +S L S + KD V + + TA
Sbjct: 438 WMAKNRFGRFSSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELSVVENHINNLHVDTA 497
Query: 394 RRLNLVADKTIKLENSPQGFAYRIT----MKLNNSIDDRYTILDTVRGGVRFQDDRLATA 449
L+L DK +KLE G +R++ K+ + Y I++T + GV+F + +L
Sbjct: 498 SDLDLSVDKQLKLEKGSLGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGVKFTNSKLKNL 557
Query: 450 NTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPY 509
+ QYQA+ EY + Q+ +V +V+ +S +++ + VL++ DVL SF+ +T P PY
Sbjct: 558 SDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVLQSFADLATSCPVPY 617
Query: 510 VRPCMKPMGTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
VRP + G +VL RHP +E Q GV++IPND G+ F ++TGPNMGGKST+I
Sbjct: 618 VRPDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFI 677
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R +GV+V +AQ+G FVPCD A+ISV D IF RVGA D Q G+STFM EM ETA+++K
Sbjct: 678 RQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVSTFMQEMLETASILKGA 737
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR------- 682
++ SL+IIDELGRGTST+DGFG+A +I L + TLFATHFHE+ L+
Sbjct: 738 SDKSLIIIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFHELTALAHRNDDEHQ 797
Query: 683 ------VIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
V + L ++ L +LY+V+PG+C +S+G+H A+ A +PE ++ A+
Sbjct: 798 HISDIGVANYHVGAHIDPLSRK--LTMLYKVEPGACDQSFGIHVAEFANFPEAVVALAKS 855
Query: 737 LMKEYEYSLDTKTPSG---DETNNREEEYFKT--VQEGEYQMFDFLQQCLSLS-KQKDTN 790
E E T T S DE ++ + F + G + FL++ +L + D +
Sbjct: 856 KAAELEDFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFLEEFAALPMDEMDGS 915
Query: 791 RILHL 795
+IL +
Sbjct: 916 KILEM 920
>sp|Q553L4|MSH2_DICDI DNA mismatch repair protein Msh2 OS=Dictyostelium discoideum
GN=msh2 PE=3 SV=1
Length = 937
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 255/737 (34%), Positives = 399/737 (54%), Gaps = 71/737 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ D K + + D+D SNL + I+Q S KECLL + N + K+ L
Sbjct: 186 GISFGDATFKTIGVSQFMDNDNLSNLSSFIMQMSVKECLLCCDQKNYDYQKVKEKLSDAG 245
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
+ T K++FS ++ QD+ RL+ +KN LP++ A LI +L+L++
Sbjct: 246 IPFTELPKSDFSSKNAEQDLTRLL----GSVKNN--LPDIEQEHAIQSASCLIKHLDLLS 299
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTY---------------DS 254
N + +F + D +Y+ + S+ LH++ + S+ + S
Sbjct: 300 NPNYFGKFKLEKYDLDRYMKLDSSSFKGLHIIDLKDSSVSAAAGGGGAGGASSSSNKDQS 359
Query: 255 LLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLP 314
L +L++C TP G RLL QW+KQPL + + I R V N+ E R +L L+ +
Sbjct: 360 LYNLLNQCNTPMGSRLLLQWVKQPLLNAEEIEARLNFVEAFYNDLELRQSLRSNDLKKIG 419
Query: 315 DMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLI-------SILESLVQNVEASNLNTILS 367
D+ L+ ++ +KA L+DC +Y V++LP ++ SI + L++ +L +I+S
Sbjct: 420 DLDRLSKKLHGQKATLEDCVNLYGIVTRLPVVLQSLNNHSSIHQELIKVNFIESLESIIS 479
Query: 368 SLQSL-----KMMD-------------------------RKDAVMDKMKEYLESTARRLN 397
K +D +KD + +K++ + A LN
Sbjct: 480 DFAKFCAMVEKTIDLDLANDKHEYVIRSSFDETLRGIQLKKDQISNKIERFRVDIADDLN 539
Query: 398 LVADKTIKLENSPQG-FAYRITMKLNNSIDD--RYTILDTVRGGVRFQDDRLATANTQYQ 454
L K +KL S + F RI+ K +I D +Y + T + GVRF + T N Y+
Sbjct: 540 LDEAK-VKLHYSEKDMFLLRISRKDEVAIRDKKKYIVHATAKDGVRFATREIDTLNEAYK 598
Query: 455 AIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCM 514
EY Q + + + I+A + + LS ++A DV V+ S S+ AP P++RP +
Sbjct: 599 KWSAEYLDKQDGLAKRTLQIAASFVPLIEDLSSLIATLDVFVTLSHVSSIAPIPFIRPEI 658
Query: 515 KPMGT-----GSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
P+G+ G++++ RHP VE+Q V++I ND+ G+ F ++TGPNMGGKST+I
Sbjct: 659 IPLGSDENGAGTVIIG-GRHPCVEIQDNVNFIANDIDLTRGQSQFQIITGPNMGGKSTFI 717
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R +G+ V +AQIGCFVP ATI+VVD I +RVGA DSQ RG+STFM EM ET+ ++K
Sbjct: 718 RQVGLIVLMAQIGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVA 777
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T+NSL+IIDELGRGTST+DGFG+A IA + + F LFATHFHE+ +LS ++P +N
Sbjct: 778 TKNSLIIIDELGRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILSDLLPMVKN 837
Query: 690 VQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKT 749
+ VSA Q + LLY+V+ G C +S+G+H A +A +P ++E A+ KE E S ++ T
Sbjct: 838 LHVSASTQNNTFTLLYKVEQGPCDQSFGIHVAILANFPSQVIENAKQKAKELE-SFESNT 896
Query: 750 PSGDETNNREEEYFKTV 766
+ +N+ E FK +
Sbjct: 897 LK--QNHNKFLEEFKEI 911
>sp|Q03MY4|MUTS_STRTD DNA mismatch repair protein MutS OS=Streptococcus thermophilus
(strain ATCC BAA-491 / LMD-9) GN=mutS PE=3 SV=1
Length = 852
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 290/545 (53%), Gaps = 37/545 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPII 365
Query: 347 ISILESLVQNVEASNLNTI--LSSLQSLK-----------------MMDRKDAVMDKMKE 387
+ILES + + L + L L+SL + D D +DK ++
Sbjct: 366 KAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 426 VMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLV 557
++ T YVRP + +++ RH +VE GV YIPN + F S + + L+
Sbjct: 546 AV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE+
Sbjct: 661 EMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADTI 780
Query: 738 MKEYE 742
+ + E
Sbjct: 781 LTQLE 785
>sp|Q5M1Z0|MUTS_STRT1 DNA mismatch repair protein MutS OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=mutS PE=3 SV=1
Length = 852
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 290/545 (53%), Gaps = 37/545 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLAE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTI--LSSLQSLK-----------------MMDRKDAVMDKMKE 387
+ILES + + L + L L+SL + D D +DK ++
Sbjct: 366 KAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 426 VMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLV 557
++ T YVRP + +++ RH +VE GV YIPN + F S + + L+
Sbjct: 546 AV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE+
Sbjct: 661 EMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADTI 780
Query: 738 MKEYE 742
+ + E
Sbjct: 781 LTQLE 785
>sp|Q5M6I1|MUTS_STRT2 DNA mismatch repair protein MutS OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=mutS PE=3 SV=1
Length = 852
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 290/545 (53%), Gaps = 37/545 (6%)
Query: 227 YVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIV 286
Y+ MS A SSL +L + + + + + SL +LD+ +T G RLL W+ +PL + +I+
Sbjct: 249 YLQMSYATKSSLDLL--ENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASII 306
Query: 287 ERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKL 346
ER + + ++N R +L E +L+G+ D++ LA R+ KA KD ++ ++Q+P +
Sbjct: 307 ERQNIIQVFLDNFFERSDLTE-SLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVI 365
Query: 347 ISILESLVQNVEASNLNTI--LSSLQSLK-----------------MMDRKDAVMDKMKE 387
+ILES + + L + L L+SL + D D +DK ++
Sbjct: 366 KAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRK 425
Query: 388 YL-ESTARRLNLVADK-------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGG 438
+ E T+ ++ A + T+K++ N G+ + +T + + D + T++
Sbjct: 426 VMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNS 485
Query: 439 VRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSF 498
RF LA + + + T + I V Y L L+ +A DVL S
Sbjct: 486 ERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL 545
Query: 499 SIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDVYFKSGEVSFNLV 557
++ T YVRP + +++ RH +VE GV YIPN + F S + + L+
Sbjct: 546 AV--TAETNHYVRPVFN--DEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDS-QTNIQLI 600
Query: 558 TGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMM 617
TGPNM GKSTY+R + +SV +AQ+G +VP DS + V D I+TR+GAAD G STFM+
Sbjct: 601 TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMV 660
Query: 618 EMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEI 677
EM E IK+ T NSL+I DELGRGT+T+DG +A SI + T+FATH+HE+
Sbjct: 661 EMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL 720
Query: 678 ALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDL 737
LS + NV V+ LE++ + L+++ G KSYG+H AK+AG P D+L +A +
Sbjct: 721 TALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPTDLLNRADTI 780
Query: 738 MKEYE 742
+ + E
Sbjct: 781 LTQLE 785
>sp|Q8RA71|MUTS_THETN DNA mismatch repair protein MutS OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=mutS PE=3 SV=1
Length = 869
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 214/694 (30%), Positives = 352/694 (50%), Gaps = 72/694 (10%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G+ VD+ T + Y EI + + I + SP E + E+L +NK + + N
Sbjct: 140 GICAVDVTTGELYATEIKNCKNGKRIYDEIAKYSPSEIISNEEFLKNNK--YIKVFKNNN 197
Query: 150 VCMTGRK--KNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ K E S E + + ++ + ++ EL++ + + H L +L++YL+
Sbjct: 198 CAVNAYKPLNYEASSELIEKQFDK--KVEELELEDKKFV--------IHSLGALLSYLKE 247
Query: 208 MNNED--NMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTP 265
+ ++N+ +++ D S Y+ + S + +L +L + S + SLLG+LDR TP
Sbjct: 248 LQKTSLKHINKLTLYQ-DNS-YMGLDSNAIRNLEILESNRNKSKKG--SLLGVLDRTVTP 303
Query: 266 QGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGR 325
G RLL +W+++PL D D I +R AV L NN R+ L E L + D++ LA +I
Sbjct: 304 MGGRLLKKWLEEPLIDKDEIEKRLDAVEELFNNYRERIELKEL-LNKVYDLERLASKIVY 362
Query: 326 KKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLK----MMDR--KD 379
+ KD + + LPK+ +IL + L I L L+ ++D+ KD
Sbjct: 363 QSVTPKDFISIKLSLQNLPKIKNILSKFSSRL----LKEIYEKLDVLQDVYELIDKSIKD 418
Query: 380 AVMDKMKE-------YLE--------STARR---LNLVADKTIK--LENSPQG----FAY 415
+++KE Y E ST + NL AD+ K ++N G F Y
Sbjct: 419 DPSNQLKEGNIIKDGYNEMVDKLRKASTEGKNWIANLEADEREKTGIKNLRIGYNKVFGY 478
Query: 416 RITMKLNN--SIDDRYTILDTVRGGVRFQDDRL-----ATANTQYQAIQREYETHQQSIV 468
I + +N + DRY T+ R+ L + + I+ EYE + +
Sbjct: 479 YIEVTKSNIPQVPDRYIRKQTLANAERYVTPELKEIEETILGAEEKLIELEYELFNE--I 536
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
E + + Q + +A DVL+SF A YV+P + +V+ + R
Sbjct: 537 REKVELQIVRIQNT---AKYIAIIDVLISF--AEVAETNKYVKPIVD--YEDRIVIKEGR 589
Query: 529 HPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCD 588
HP+VE ++ ND+ E ++TGPNM GKSTY+R + + V +AQ+GCFVP
Sbjct: 590 HPVVETISDEGFVANDIDI-GPENPIMIITGPNMAGKSTYMRQVALIVLMAQVGCFVPAS 648
Query: 589 SATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFD 648
A I +VD+IFTRVGA+D + G STFM+EM E A ++ T SL+I+DE+GRGTST+D
Sbjct: 649 YARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILHSATSKSLIILDEVGRGTSTYD 708
Query: 649 GFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVK 708
G +A ++ + + TLFATH+HE+ L + RN VS E+ED+++ L+++
Sbjct: 709 GMSIAQAVIEYIHEKIKAKTLFATHYHELTKLEGKLRGVRNFNVSVEEREDDIIFLHKIV 768
Query: 709 PGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
PG +SYG+ +K+AG P ++E+A+++++ E
Sbjct: 769 PGGSDRSYGIQVSKLAGLPYSIIERAKEILEALE 802
>sp|A4G717|MUTS_HERAR DNA mismatch repair protein MutS OS=Herminiimonas arsenicoxydans
GN=mutS PE=3 SV=3
Length = 893
Score = 283 bits (724), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 275/536 (51%), Gaps = 48/536 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L +LD CRT G RLL W+ +D RHAA+N L+ T+A L L +
Sbjct: 312 TLFSLLDHCRTAMGSRLLRHWLHHARRDQAVARARHAAINALMR-TDACTGL-ASTLASV 369
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS-- 371
PD++ +A RI + A +D + G+ QLP L + + Q+ +A L TI +L +
Sbjct: 370 PDVERIATRIALQSARPRDLAGMRGGLQQLPSLRAYVSMCNQDADAPLLKTIHDALATPS 429
Query: 372 --LKMMDRK-------------------DAVMDKMKEYLESTA--------RRLNLVADK 402
L +++R DA +D+++ E+ R
Sbjct: 430 ECLDLVERAIALEPAAMVRDGGVIARGFDAELDELRGLSENAGQFLVDLETRERTRTGIN 489
Query: 403 TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+++E N GF +T + + D Y T++ R+ L + + Q
Sbjct: 490 NLRVEYNKVHGFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERAL 549
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS----TCAPKPYVRPCMKPM 517
++ + ++V+ A + TL ++ LAQ D LV+ + + CAP+ P
Sbjct: 550 AREKYLYDQVLQQMAQHIGTLQNIAHALAQLDTLVALAEHALRHNWCAPQLIAEP----- 604
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
++ + Q RHP+VE +I ND + E L+TGPNMGGKSTY+R + +
Sbjct: 605 ---TIAIEQGRHPVVE-NHIERFIANDCLLNN-ESRLLLITGPNMGGKSTYMRQVALITL 659
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA +G FVP SATI +D+IFTR+GAAD G STFM+EM E+A ++ TENSLV++
Sbjct: 660 LAYVGSFVPATSATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLM 719
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTSTFDG +A +IAR L + FTLFATH+ E+ L V P+ NV +SA+E
Sbjct: 720 DEVGRGTSTFDGLALAWAIARHLIDSTRSFTLFATHYFELTQLPEVHPSAANVHLSAVEH 779
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+D++V L+ V+ G +SYG+ A++AG P+ ++ AR + E + TP D
Sbjct: 780 KDSIVFLHAVQAGPASQSYGLQVAQLAGVPQAVIRAARKHLATLEANSMQATPQFD 835
>sp|C0MGC5|MUTS_STRS7 DNA mismatch repair protein MutS OS=Streptococcus equi subsp.
zooepidemicus (strain H70) GN=mutS PE=3 SV=1
Length = 851
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 313/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
E SEE+ L++ +N L+ F+ + L+++ L+ L++Y+ + +
Sbjct: 178 ELSEEEQAILVKQMNLLLSFETTALEDSPLIDHQLTAVELSAAGKLLHYVHQTQLRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ D Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQTLVHYDIKDYLQMSYATKSSLDLL--ENARTGKKHGSLYWLLDETKTAMGMRLLRAWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L + +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVTSEAILERQEIIQVFLNAFIERTDLSD-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------------- 372
+ ++++P + ++LE+ +N I L L+ L
Sbjct: 355 LGHTLAKVPYIKAVLEAFNSPYLDKLVNQIDTLPELEHLIRSAIDPDAPATINEGNIIRT 414
Query: 373 ---KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID 426
+ +D VM + ++ E+ R+ + +++ I N G+ + +T +
Sbjct: 415 GFDERLDHYRKVMREGTGWIADIETKERQASGISNLKIDY-NKKDGYYFHVTNSNLGMVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L QL+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ YVRP + ++ RH +VE GV YIPN +
Sbjct: 534 KALATVDVLQSLAV--VAEKNHYVRPLFNQ--ESRIAIDNGRHAVVEKVLGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQIG FV +SA++ + D IFTR+GAA
Sbjct: 590 SF-GPQTSIQLITGPNMSGKSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ T +SL++ DELGRGT+T+DG +A SI +
Sbjct: 649 DDLISGQSTFMVEMMEANHAIKRATPHSLILFDELGRGTATYDGMALAQSIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + NV V+ LE++ N+ L+++ G KSYG+H A++AG
Sbjct: 709 AKTMFATHYHELTELSTKLTKLVNVHVATLEKDGNVTFLHKIAEGPADKSYGIHVARIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
PED+L +A ++ + E
Sbjct: 769 LPEDLLARADAVLTKLE 785
>sp|C0MAS5|MUTS_STRE4 DNA mismatch repair protein MutS OS=Streptococcus equi subsp. equi
(strain 4047) GN=mutS PE=3 SV=1
Length = 851
Score = 280 bits (715), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 188/617 (30%), Positives = 313/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
E SEE+ L++ +N L+ F+ + L+++ L+ L++Y+ + +
Sbjct: 178 ELSEEEQAILVKQLNLLLSFEMTALEDSPLIDHQLTAVELSAAGKLLHYVHQTQLRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ D Y+ MS A SSL +L + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYDIKDYLQMSYATKSSLDLL--ENARTGKKHGSLYWLLDETKTAMGMRLLRAWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L + +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVTSEAILERQEIIQVFLNAFIERTDLSD-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------------- 372
+ ++++P + +ILE+ +N I L L+ L
Sbjct: 355 LGHTLAKVPYIKAILEAFNSPYLDKLVNQIDTLPELEHLIRSAIDPDAPATINEGNIIRT 414
Query: 373 ---KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSID 426
+ +D VM + ++ E+ R+ + +++ I N G+ + +T +
Sbjct: 415 GFDERLDHYRKVMREGTGWIADIETKERQASGISNLKIDY-NKKDGYYFHVTNSNLGMVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L QL+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ YVRP + ++ RH +VE GV YIPN +
Sbjct: 534 KALATVDVLQSLAV--VAEKNHYVRPLFNQ--ESKIAIDNGRHAVVEKVLGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQIG FV +SA++ + D IFTR+GAA
Sbjct: 590 SF-GPQTSIQLITGPNMSGKSTYMRQLALTVIMAQIGSFVAAESASLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ T +SL++ DELGRGT+T+DG +A SI +
Sbjct: 649 DDLISGQSTFMVEMMEANHAIKRATPHSLILFDELGRGTATYDGMALAQSIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + NV V+ LE++ N+ L+++ G KSYG+H A++AG
Sbjct: 709 AKTMFATHYHELTELSTKLTKLVNVHVATLEKDGNVTFLHKIAEGPADKSYGIHVARIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
PED+L +A ++ + E
Sbjct: 769 LPEDLLARADTVLTKLE 785
>sp|Q3JYM3|MUTS_STRA1 DNA mismatch repair protein MutS OS=Streptococcus agalactiae
serotype Ia (strain ATCC 27591 / A909 / CDC SS700)
GN=mutS PE=3 SV=1
Length = 858
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 202/723 (27%), Positives = 354/723 (48%), Gaps = 73/723 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREIVVGYQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIVVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEVLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAEN--HHYVRP--KFNDEHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM GKSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + T+FATH+HE+ LS + NV V+ LE++ + L++++ G KS
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYE---YSLDTKTPSGDETNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E L P T + EE Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDILSQLEADAVQLIVSAPQEAVTADLNEELDSEKQQGQLS 819
Query: 773 MFD 775
+F+
Sbjct: 820 LFE 822
>sp|A6SXI2|MUTS_JANMA DNA mismatch repair protein MutS OS=Janthinobacterium sp. (strain
Marseille) GN=mutS PE=3 SV=1
Length = 882
Score = 276 bits (706), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 272/536 (50%), Gaps = 48/536 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+L +LD CRT G RLL W+ +D + RHAA+N L+ +A L L +
Sbjct: 306 TLFSLLDHCRTAMGSRLLRHWLHHARRDQSVAMARHAAINALMR-ADACSGLAS-TLASV 363
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQS-- 371
PD++ + RI A +D + G+ QLP L + + ++ +A L TI +L +
Sbjct: 364 PDVERITTRIALLSARPRDLAGMRGGLQQLPSLRAYVSMCNKDADAPLLKTIHDALATPS 423
Query: 372 --LKMMDRK-------------------DAVMDKMKEYLESTA--------RRLNLVADK 402
L +++R DA +D+++ E+ R
Sbjct: 424 DCLDLVERAIAMEPAAMVRDGGVIARGFDAELDELRGLSENAGQFLIDLETRERARTGIN 483
Query: 403 TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYE 461
+++E N GF +T + + D Y T++ R+ L + + Q
Sbjct: 484 NLRVEYNKVHGFYIEVTHGQTDKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQERAL 543
Query: 462 THQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIAS----TCAPKPYVRPCMKPM 517
++ + E+V+ + TL ++ LAQ D LV+ + + CAP+ P
Sbjct: 544 AREKYLYEQVLQQMTQHIATLQNIAHALAQLDTLVALAEHALRHNWCAPQLVSEP----- 598
Query: 518 GTGSLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
++ + Q RHP+VE +I ND S E L+TGPNMGGKSTY+R + +
Sbjct: 599 ---TITIEQGRHPVVE-NHIERFIANDCLLSS-ECKLLLITGPNMGGKSTYMRQVALITL 653
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA +G FVP SA I +D+IFTR+GAAD G STFM+EM E+A ++ TENSLV++
Sbjct: 654 LAYVGSFVPASSAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLM 713
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTSTFDG +A +IA+ L + + FTLFATH+ E+ L + PT NV +SA+E
Sbjct: 714 DEVGRGTSTFDGLALAWAIAKHLIDNTKSFTLFATHYFELTQLPEIHPTAANVHLSAVEH 773
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGD 753
+D++V L+ V+ G +SYG+ A++AG P+ ++ AR + E + TP D
Sbjct: 774 KDSIVFLHAVQAGPASQSYGLQVAQLAGVPQPVIRAARKHLALLEANSMQATPQFD 829
>sp|Q8DWW1|MUTS_STRA5 DNA mismatch repair protein MutS OS=Streptococcus agalactiae
serotype V (strain ATCC BAA-611 / 2603 V/R) GN=mutS PE=3
SV=1
Length = 858
Score = 275 bits (704), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 202/723 (27%), Positives = 356/723 (49%), Gaps = 73/723 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREIVVGYQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIIVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAENYH--YVRP--KFNDQHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM GKSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + T+FATH+HE+ LS + NV V+ LE++ + L++++ G KS
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYEYSLD--TKTPSGDE-TNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E +PS + T + EE Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDILSQLEADAVQLIVSPSQEAVTADLNEELDSEKQQGQLS 819
Query: 773 MFD 775
+F+
Sbjct: 820 LFE 822
>sp|Q8E2R3|MUTS_STRA3 DNA mismatch repair protein MutS OS=Streptococcus agalactiae
serotype III (strain NEM316) GN=mutS PE=3 SV=1
Length = 858
Score = 275 bits (704), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 202/723 (27%), Positives = 356/723 (49%), Gaps = 73/723 (10%)
Query: 88 TVGVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDR 147
T G+A +D+ T +F + D + ++ + I+ +E ++ + L D KN ++T
Sbjct: 138 TFGLAYMDVSTGEFQATLLTD---FESVRSEILNLKAREIVVGYQ-LTDEKNHLLT---- 189
Query: 148 NKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLEL 207
+ +N L+ ++D L + L+ E L+ Y+
Sbjct: 190 -------------------KQMNLLLSYEDERLNDIHLIDEQLTDLEISAAEKLLQYVHR 230
Query: 208 MNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQG 267
+ + + + Y+ MS A +SL +L + + +++ + SL +LD +T G
Sbjct: 231 TQKRELSHLQKVVHYEIKDYLQMSYATKNSLDLL--ENARTSKKHGSLYWLLDETKTAMG 288
Query: 268 HRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKK 327
R+L W+ +PL ++ I ER + + ++ R +L E +L+G+ D++ LA R+ K
Sbjct: 289 TRMLRTWIDRPLVSMNRIKERQDIIQVFLDYFFERNDLTE-SLKGVYDIERLASRVSFGK 347
Query: 328 AGLKDCYRVYEGVSQLPKLISILESLVQ---NVEASNLNTILSSLQSL------------ 372
A KD ++ + +SQ+P++ IL+S Q ++ + ++T + L+SL
Sbjct: 348 ANPKDLLQLGQTLSQIPRIKMILQSFNQPELDIIVNKIDT-MPELESLINTAIAPEAQAT 406
Query: 373 ------------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYR 416
K +D VM + ++ E+ R + + T+K++ N G+ +
Sbjct: 407 ITEGNIIKSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG--TLKIDYNKKDGYYFH 464
Query: 417 ITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISA 476
+T + + + + T++ R+ LA + + + + I V
Sbjct: 465 VTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 477 GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQG 536
Y + L +L+ +A DVL S ++ + YVRP K + + RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAENYH--YVRP--KFNDQHQIKIKNGRHATVEKVM 580
Query: 537 GV-SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVV 595
GV YIPN +YF S + L+TGPNM GKSTY+R + ++V +AQ+G FV D + V
Sbjct: 581 GVQEYIPNSIYFDS-QTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 596 DQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACS 655
D IFTR+GAAD G STFM+EM E +K+ ++ SL++ DELGRGT+T+DG +A S
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 656 IARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKS 715
I + + T+FATH+HE+ LS + NV V+ LE++ + L++++ G KS
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDLSEQLTRLVNVHVATLERDGEVTFLHKIESGPADKS 759
Query: 716 YGVHCAKMAGYPEDMLEQARDLMKEYEYSLD--TKTPSGDE-TNNREEEYFKTVQEGEYQ 772
YG+H AK+AG P D+L++A D++ + E +PS + T + EE Q+G+
Sbjct: 760 YGIHVAKIAGLPIDLLDRATDILSQLEADAVQLIVSPSQEAVTADLNEELDSEKQQGQLS 819
Query: 773 MFD 775
+F+
Sbjct: 820 LFE 822
>sp|Q8DRW8|MUTS_STRMU DNA mismatch repair protein MutS OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=mutS PE=3 SV=1
Length = 849
Score = 272 bits (695), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 197/684 (28%), Positives = 335/684 (48%), Gaps = 68/684 (9%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
G++ +DL T +FY + D LPA +++++ + R
Sbjct: 139 GLSYMDLSTGEFYATTLAD--------------------LPAV-----RSEVLNLKTREL 173
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMN 209
V G + +E ++ + +N L+ F+ + + LL + L+ Y+
Sbjct: 174 VI--GFELSENEDQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELAAAGKLLQYVHNTQ 231
Query: 210 NEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHR 269
+ + + + Y+ M+ A SSL +L + + S + + SL +LD +T G R
Sbjct: 232 KRELSHLQKLVHYEIKDYLQMAYATKSSLDLL--ENARSGKKHGSLYWLLDETKTAMGTR 289
Query: 270 LLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAG 329
LL W+ +PL I +R + +++ R +L + +L+G+ D++ LA R+ KA
Sbjct: 290 LLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSD-SLKGVYDIERLASRVSFGKAN 348
Query: 330 LKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQSL--------------- 372
KD ++ + +SQ+P + +ILES + S +N I L L++L
Sbjct: 349 PKDLLQLGQTLSQVPVIKTILESFASSSLESLINQIDTLPELEALIRSAIDSNAPITITE 408
Query: 373 ---------KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLE-NSPQGFAYRITM 419
+ +D+ VM + ++ E+ R+ + ++ T+K++ N G+ + +T
Sbjct: 409 GGMIREGFDETLDKYRTVMREGTSWIADIETKERQKSGIS--TLKIDYNKKDGYYFHVTN 466
Query: 420 KLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYT 479
+ + D + T++ RF LA + + E + I + Y
Sbjct: 467 SNLSLVPDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRSQVESYI 526
Query: 480 QTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGV 538
+ L L+ LA DVL S ++ + YVRP + + RH +VE + G
Sbjct: 527 ERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQQ--EISIENGRHAVVEKVMGSQ 582
Query: 539 SYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQI 598
YIPN + F + S L+TGPNM GKSTY+R + ++V +AQ+G FV DSA + + D I
Sbjct: 583 EYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQLGSFVAADSADLPIFDAI 641
Query: 599 FTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIAR 658
FTR+GAAD G STFM+EM E IK T NSL++ DELGRGT+T+DG +A +I
Sbjct: 642 FTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLILFDELGRGTATYDGMALAQAIIE 701
Query: 659 ELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGV 718
+ + TLFATH+HE+ LS + + NV V+ LE++ + L+++ G KSYG+
Sbjct: 702 YIHNKVGAKTLFATHYHELTDLSTRLTSLVNVHVATLEKDGEVTFLHKIADGPADKSYGI 761
Query: 719 HCAKMAGYPEDMLEQARDLMKEYE 742
H AK+AG P+D+L +A ++ + E
Sbjct: 762 HVAKIAGLPKDLLNRADHILVDLE 785
>sp|Q88UZ7|MUTS_LACPL DNA mismatch repair protein MutS OS=Lactobacillus plantarum (strain
ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=mutS PE=3 SV=1
Length = 896
Score = 271 bits (694), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 282/546 (51%), Gaps = 58/546 (10%)
Query: 234 VMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVN 293
+M S+ +QG+ LL +LD +T G RLL QW+ +PL I R V
Sbjct: 266 LMKSIRTGKKQGT--------LLWLLDETKTAMGGRLLKQWIDRPLIVKADIETRQNKVA 317
Query: 294 ILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESL 353
L+++ R NL E L + D++ LA R+ +D ++ + Q+PK+ IL L
Sbjct: 318 TLLDHYFERSNLQE-ELTKVYDLERLAGRVAFGSVNGRDLVQLKTSLRQIPKIRYILSEL 376
Query: 354 ---VQNVEASNLNTI--LSSLQSLKMMDR-----------KDAVMDKMKEYLESTARRLN 397
V N E + L+ + ++ L +++ KD +++ +Y ++
Sbjct: 377 DTQVFNDEVNQLDPVEDVADLIDAAIVEDAPLSVTDGGVIKDGYNEQLDQYRDAMNNGKK 436
Query: 398 LVAD------KTIKLENSPQGF----AYRITMKLNNSID---DRYTILDTVRGGVRFQDD 444
+A+ T ++N GF Y I + N DRY T+ RF
Sbjct: 437 WIAELEAQERATTGIKNLKIGFNRVFGYYIEVTKANLAQLPKDRYERKQTLTNAERFSTP 496
Query: 445 RLATANTQYQAIQREYETHQQSI-------VEEVIGISAGYTQTLNQLSDVLAQFDVLVS 497
L + ++++ E E+H + V E + + Q L L+ +A DVL S
Sbjct: 497 ELKS----HESLILEAESHSTDLEYQLFTKVRETVKKA---IQRLQTLAKAVAAIDVLQS 549
Query: 498 FSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNL 556
F++ S +VRP K + L + RHP+VE + G SY+PN+V E L
Sbjct: 550 FAVVS--EDYHFVRP--KLTKSHDLKIVDGRHPVVEKVMGNQSYVPNNVTMSPDETVL-L 604
Query: 557 VTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFM 616
+TGPNM GKSTY+R + ++V +AQIGCFVP SA + + DQIFTR+GA D G STFM
Sbjct: 605 ITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTFM 664
Query: 617 MEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHE 676
+EM+E ++ T NSLV+ DE+GRGT+T+DG +A +I + +H TLF+TH+HE
Sbjct: 665 VEMQEANNALQHATANSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYHE 724
Query: 677 IALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARD 736
+ L + + RNV V A EQ+ LV L++V+PG+ KSYGVH AK+AG P +LE+A
Sbjct: 725 LTALDQELSGLRNVHVGATEQDGELVFLHKVEPGAADKSYGVHVAKLAGMPTSLLERANK 784
Query: 737 LMKEYE 742
++ E
Sbjct: 785 ILTSLE 790
>sp|C1CN23|MUTS_STRZP DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain P1031) GN=mutS PE=3 SV=1
Length = 844
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>sp|C1CH06|MUTS_STRZJ DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain JJA) GN=mutS PE=3 SV=1
Length = 844
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>sp|B8ZPK0|MUTS_STRPJ DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain ATCC 700669 / Spain 23F-1) GN=mutS PE=3 SV=1
Length = 844
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>sp|C1CAQ5|MUTS_STRP7 DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain 70585) GN=mutS PE=3 SV=1
Length = 844
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>sp|Q04I96|MUTS_STRP2 DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
serotype 2 (strain D39 / NCTC 7466) GN=mutS PE=3 SV=1
Length = 844
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>sp|P0A3R4|HEXA_STRR6 DNA mismatch repair protein HexA OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=hexA PE=3 SV=1
Length = 844
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>sp|P0A3R3|HEXA_STRPN DNA mismatch repair protein HexA OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=hexA PE=3
SV=1
Length = 844
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>sp|B1I9E5|MUTS_STRPI DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain Hungary19A-6) GN=mutS PE=3 SV=1
Length = 844
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 316/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQTLAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + S LVTGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQMAE-DTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>sp|C1CTY2|MUTS_STRZT DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain Taiwan19F-14) GN=mutS PE=3 SV=1
Length = 844
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKMMDRK--- 378
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 379 -----------DAVMDKMKEYLESTARRLNLVADK--------TIKLE-NSPQGFAYRIT 418
D +DK + L + + K T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYRCVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLE 785
>sp|A7GR99|MUTS_BACCN DNA mismatch repair protein MutS OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=mutS PE=3 SV=1
Length = 895
Score = 270 bits (689), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 282/544 (51%), Gaps = 50/544 (9%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLL +LD+ +T G R+L QWM++PL + I ER V VN+ R +L E L+ +
Sbjct: 278 SLLWLLDKTKTAMGGRMLKQWMERPLIQKEKIEERLEMVETFVNDYFLREDLKE-KLKEV 336
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL- 372
D++ LA ++ +D ++ + Q+P ++ + SL+ N A+ L ++L
Sbjct: 337 YDLERLAGKVAYGSVNARDLLQLKRSLQQVPAILEAI-SLLDNSYAAKLIEGADPCEALT 395
Query: 373 KMMDR----------------KDAVMDKMKEY-----------LESTARRLNLVADKTIK 405
K++DR KD +K+ EY E R + K++K
Sbjct: 396 KLLDRSIQENPPLSVKDGDIIKDGYNEKLDEYRYISKNGKTWIAELEKREREITGIKSLK 455
Query: 406 LE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRFQDDRLATANT-----QYQAIQ 457
+ N G+ +T K N S+ + RY T+ RF D L T + + +Q
Sbjct: 456 IGYNRIFGYYIEVT-KANLSLLPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQ 514
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
EY+ ++ EEV + L L+ V+++ DVL SF A+ + +V+P +
Sbjct: 515 LEYDLFT-ALREEV----KVFIPKLQHLAKVISELDVLQSF--ATVSEEERFVKPVL--T 565
Query: 518 GTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSV 576
+ + RHP+VE + G Y+PND F L+TGPNM GKSTY+R + +
Sbjct: 566 NKREIFIKDGRHPVVEKVLDGKLYVPNDCMMPENMDVF-LITGPNMSGKSTYMRQLALVT 624
Query: 577 FLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVI 636
+AQIGCFVP A + V DQIFTR+GAAD G STFM+EM E I +E SL++
Sbjct: 625 IMAQIGCFVPATEAILPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLIL 684
Query: 637 IDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALE 696
DE+GRGTST+DG +A +I + TLF+TH+HE+ +L + +NV VSA+E
Sbjct: 685 FDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEESLTHLKNVHVSAIE 744
Query: 697 QEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSGDETN 756
++ +V L++++ G+ KSYG+H A++A P+ ++ +A++++ + E + P E
Sbjct: 745 EDGKVVFLHKIQEGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEITIPKRTEVK 804
Query: 757 NREE 760
+ E
Sbjct: 805 EQPE 808
>sp|A0L7L5|MUTS_MAGSM DNA mismatch repair protein MutS OS=Magnetococcus sp. (strain MC-1)
GN=mutS PE=3 SV=1
Length = 868
Score = 269 bits (687), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 272/525 (51%), Gaps = 44/525 (8%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
SLLG++DRC TP G RLLAQW+ +PL+ LDAI R +V+ L N A +L E LR +
Sbjct: 290 SLLGVMDRCITPMGSRLLAQWINRPLQSLDAIATRQESVSWLRENLVAYQDLRER-LRMV 348
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISIL----------------------- 350
D++ RI ++A +D + + + LP+L +IL
Sbjct: 349 HDLERFLSRIALRRASPRDLGGLRQTLQCLPQLYAILTPADGHSLAVPSLLRILADHFNG 408
Query: 351 -ESLVQNVE---ASNLNTILSSLQSLKM-----MDRKDAVMDKMKEYL---ESTARRLNL 398
E+L + +E A L L +++++ +D ++ K YL E R
Sbjct: 409 HEALTKQLEQQLADELPLNLKEGETIRLGFDQTLDTLRSLSRDGKSYLTKLEVEEREKTG 468
Query: 399 VADKTIKLENSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQR 458
+ IK S G++ +T + + RY T+ GVR+ + L Q +
Sbjct: 469 IPSLKIKYHRS-FGYSMEVTKTHLDKVPPRYIQRQTMTNGVRYVTEELKEYEEQLLTAEE 527
Query: 459 EYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMG 518
+Q + E + A +TL + +A DVL +F A + Y RP +
Sbjct: 528 RMLEREQLLFEALAEQVARQAETLQASARAIATLDVLANF--AHIAEERNYCRPLLH--- 582
Query: 519 TGSLV-LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 577
G+++ +NQ RHP+VE ++ ND+ + + + L+TGPNM GKST +R + + V
Sbjct: 583 EGAVIEINQGRHPVVEQFSDTPFVANDIRLDNRQRT-GLITGPNMAGKSTLMRQVALIVL 641
Query: 578 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 637
LA G VP SA I VD+IFTRVGA+D G STFM+EM ETA ++ +E SLVI+
Sbjct: 642 LAHTGACVPAGSAKIGRVDRIFTRVGASDDLAGGRSTFMVEMTETAHILHHASERSLVIL 701
Query: 638 DELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQ 697
DE+GRGTST+DG +A ++A + + Q TLFATH+HE+ L + N+ V E
Sbjct: 702 DEIGRGTSTYDGLSIAWAVAEHIHTQCQARTLFATHYHELTQLESQLDGVFNLTVEVKEW 761
Query: 698 EDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
+D ++ L+ + G+ +SYG+H A++AG P + +AR+++ + E
Sbjct: 762 KDQILFLHTIVRGAADRSYGIHVAQLAGLPRAVTRRAREVLADLE 806
>sp|A8AZU4|MUTS_STRGC DNA mismatch repair protein MutS OS=Streptococcus gordonii (strain
Challis / ATCC 35105 / CH1 / DL1 / V288) GN=mutS PE=3
SV=1
Length = 847
Score = 268 bits (686), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 290/570 (50%), Gaps = 71/570 (12%)
Query: 219 IHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQP 278
+H + ++ M A +SL + + + + + + SL ++D +T G RLL W++ P
Sbjct: 241 VHHYEIKDFLQMDYATKTSLDL--TENARTGKKHGSLFWLMDETKTAMGGRLLRSWIQHP 298
Query: 279 LKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYE 338
L D I++R V + ++ R +L + +L+G+ D++ L R+ K KD ++
Sbjct: 299 LIDKGRIIKRQDVVQVFLDYFFERSDLAD-SLKGVYDIERLVSRVSFGKTNPKDLLQLAS 357
Query: 339 GVSQLPKLISILESLVQNVEASNLNTILSSLQSL-------------------------- 372
+S +P++ SILE+ +E+ L ++++ L ++
Sbjct: 358 TLSHVPQIRSILET----IESPALESLVARLDAIPELENLISSAIDPDAPQVITEGNIIR 413
Query: 373 ----KMMDRKDAVMDKMKEYL---ESTARRLNLVADKTIKLENSPQGFAYRITMKLNNSI 425
+ +D+ VM + ++ E+ R + + + I N G+ + +T ++
Sbjct: 414 TGFDETLDQYRLVMREGTSWIADIEAKEREASGITNLKIDY-NKKDGYYFHVTNSQLGNV 472
Query: 426 DDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQSIVEEVIG 473
+ T++ RF + LA +AN +Y+ R I EEV
Sbjct: 473 PSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMR--------IREEV-- 522
Query: 474 ISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE 533
Y Q L L+ LA DVL SF++ + + VRP + SL + + RH +VE
Sbjct: 523 --GKYIQRLQALAQTLATVDVLQSFAVVAES--QHLVRPSFT--SSRSLQIKKGRHAVVE 576
Query: 534 -LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATI 592
+ G SYIPN + E L+TGPNM GKSTY+R + + V +AQ+G +VP + A++
Sbjct: 577 KVMGAQSYIPNSIELDQ-ETDIQLITGPNMSGKSTYMRQLAMIVIMAQMGSYVPAEVASL 635
Query: 593 SVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGM 652
+ D IFTR+GAAD G STFM+EM E I++ +E SL++ DELGRGT+T+DG +
Sbjct: 636 PIFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTATYDGMAL 695
Query: 653 ACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSC 712
A +I + + TLFATH+HE+ LS + NV V+ LE++ + L++++ G
Sbjct: 696 AQAIIEYIHDRTKAKTLFATHYHELTDLSSSLTRLENVHVATLEKDGQVTFLHKIEAGPA 755
Query: 713 VKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
KSYG+H AK+AG P D+L +A ++ + E
Sbjct: 756 DKSYGIHVAKIAGLPTDLLRRADAILTDLE 785
>sp|Q03EQ7|MUTS_PEDPA DNA mismatch repair protein MutS OS=Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w) GN=mutS PE=3 SV=1
Length = 873
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 272/519 (52%), Gaps = 36/519 (6%)
Query: 254 SLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGL 313
+LL +LD +T G RLL QW+ +PL I+ R V +LV++ R NL E L +
Sbjct: 280 TLLWLLDETKTAMGGRLLKQWLDRPLIRKKEIISRQDRVQVLVDHFFERSNLQE-ELTKV 338
Query: 314 PDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTI--LSSLQS 371
D++ LA R+ +D ++ + Q+PK+ ILE L + V L + +S +
Sbjct: 339 YDLERLAGRVAFGSVNGRDLIQLKTSLLQIPKVRHILEELSEPVFDDALEHLDPVSDIAE 398
Query: 372 L--KMMDR------------KDAVMDKMKEYLESTARRLNLVAD-----------KTIKL 406
L +D KD K+ EY ++ +AD KT+K+
Sbjct: 399 LIQNAIDEDAPISVTDGDIIKDGYHAKLDEYRDAMRNGKKWIADLQAQERATTGIKTLKI 458
Query: 407 E-NSPQGFAYRIT-MKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQ 464
N G+ +T L N + RY T+ RF L +++ +
Sbjct: 459 GYNKVFGYYIEVTRANLANIPEGRYERKQTLTNAERFITPELKEKERIILEAEQKSTDLE 518
Query: 465 QSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVL 524
+ +E+ + + L L+ +A+ DVL SF++ S +V+P M ++ +
Sbjct: 519 YQLFKEIRELIKKQIERLQDLAKQVAELDVLQSFAVVS--EKYQFVKPTM--TKNHAIEI 574
Query: 525 NQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 583
RHP+VE + G SY+PN++ L+TGPNM GKSTY+R + ++V +AQ+GC
Sbjct: 575 KDGRHPVVEKVMGHQSYVPNNIDMDDN-TDILLITGPNMSGKSTYMRQLALTVIMAQMGC 633
Query: 584 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 643
FV AT+ + DQIFTR+GAAD G STFM+EM+E +K T NSLV+ DE+GRG
Sbjct: 634 FVAASEATLPIFDQIFTRIGAADDLISGQSTFMVEMQEANRALKDGTSNSLVLFDEIGRG 693
Query: 644 TSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVL 703
T+T+DG +A SI + + TLF+TH+HE+ L + + +NV V A+EQ NLV
Sbjct: 694 TATYDGMALAQSIIEFIHQNVHAKTLFSTHYHELTELDQSLEHLKNVHVGAVEQNGNLVF 753
Query: 704 LYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
L++++ G KSYG+H AK+AG P+ +L++A ++++ E
Sbjct: 754 LHKMEDGPADKSYGIHVAKLAGMPDKLLKRASVILEKLE 792
>sp|A2RP10|MUTS_LACLM DNA mismatch repair protein MutS OS=Lactococcus lactis subsp.
cremoris (strain MG1363) GN=mutS PE=3 SV=1
Length = 840
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 188/593 (31%), Positives = 306/593 (51%), Gaps = 46/593 (7%)
Query: 185 LLPEMCLTTA--THCLRSLINYLELMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLP 242
LL E+ TA L+ Y++ D + + + ++ M A SSL +
Sbjct: 203 LLIELSGLTALENQAASKLLAYVKETQMRDLSHLQEVEHYEIKDFLQMDFATKSSLELTA 262
Query: 243 QQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEAR 302
+ + + +L +LD +T G R+L W+ +PL AI +R V + +++ R
Sbjct: 263 NKREN--KKHGTLYWLLDETKTAMGTRMLRSWIDRPLVSNSAIQKRMEIVQVFLDHFFER 320
Query: 303 MNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQ---NVEA 359
+L E AL+G+ D++ LA R+ KA D ++ +S +P + +ILE L + N
Sbjct: 321 SDLIE-ALKGVYDLERLASRVSFGKAVPVDFLQLANSLSNVPAIKNILEVLDEMPLNELR 379
Query: 360 SNLNTI--LSSLQSLKMMDRK--------------DAVMDKMKEYLES-TARRLNLVADK 402
S L+ I LS L + + + + +DK +E LE+ T+ L AD+
Sbjct: 380 SQLDEIPELSGLINSAISENASRTITEGGIIKKGYNVQLDKYREALENGTSWIAKLEADE 439
Query: 403 -------TIKLE-NSPQGFAYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQ 454
T++++ N G+ + IT NS+ + + T++ RF L T+ +
Sbjct: 440 KAKTGISTLRIDYNRKDGYYFHITQSQLNSVPEHFYRKATLKNSERFGSQEL----TEIE 495
Query: 455 AIQREYETHQQSIVEEV-IGISA---GYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYV 510
I E S+ ++ +G+ A Y L L+ +A+ D L S S+ + Y+
Sbjct: 496 EIMLEAREKSSSLEYDLFMGLRAETEQYIGRLQALAKTIAEIDCLQSLSV--VAEKQGYI 553
Query: 511 RPCMKPMGTGSLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYI 569
RP + G+ + + RH +VE + G Y+PND+ + L+TGPNM GKSTY+
Sbjct: 554 RPTLTE-GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPE-QTDIQLITGPNMSGKSTYM 611
Query: 570 RSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKC 629
R ++V +AQIG FVP ++A + + D IFTR+GA+D+ G STFM+EM E I+K
Sbjct: 612 RQFALTVIMAQIGSFVPAETANLPIFDAIFTRIGASDNLISGESTFMVEMSEANHAIQKA 671
Query: 630 TENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRN 689
T SL+I DELGRGT+T+DG +A +I + H TLFATH+HE+ L + + N
Sbjct: 672 TSRSLIIFDELGRGTATYDGMALAQAIIEYVHEHIGAKTLFATHYHELTDLDKELDHLDN 731
Query: 690 VQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
V V+ LEQ N+ L+++ G KSYG+H AK+AG P+ +LE+A ++++ E
Sbjct: 732 VHVATLEQNGNVTFLHKITDGPADKSYGIHVAKIAGLPQTLLERADLILQKLE 784
>sp|Q1J489|MUTS_STRPF DNA mismatch repair protein MutS OS=Streptococcus pyogenes serotype
M4 (strain MGAS10750) GN=mutS PE=3 SV=1
Length = 851
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 312/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES + L + SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESF-NSAYVDKLVNDIDSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
D + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 DHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>sp|A4W4J7|MUTS_STRS2 DNA mismatch repair protein MutS OS=Streptococcus suis (strain
98HAH33) GN=mutS PE=3 SV=1
Length = 847
Score = 266 bits (681), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 321/645 (49%), Gaps = 61/645 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
R + + G +E E+ +N L+ F+D ++ +L+ L++YL
Sbjct: 170 RARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKAAAGKLLSYLH 229
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
D + + + Y+ M A SSL +L + + + + SL +LD +T
Sbjct: 230 RTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLL--ENGRTGKKHGSLYWLLDETKTAM 287
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL DL I R A V + ++ R +L E AL+G+ D++ LA R+
Sbjct: 288 GMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVE-ALKGVYDIERLASRVSFG 346
Query: 327 KAGLKDCYRVYEGVSQLPKLISIL----ESLVQNVEAS-----NLNTILSS--------- 368
K KD ++ + + +P + +IL E + N+ A L+ ++SS
Sbjct: 347 KTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHALISSAIDPEAQGT 406
Query: 369 --------------LQSLKMMDRKDAVMDKMKEYLESTARRLNLVADKTIKLE-NSPQGF 413
L +++ R+ A E E A +N +K++ N G+
Sbjct: 407 ITDGNIIRTGFDETLDQYRLVMREGAGWIAEIEAKEREASGIN-----NLKIDYNKKDGY 461
Query: 414 AYRITMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQY-----QAIQREYETHQQSIV 468
+ +T ++ D + T++ R+ + LA Q ++ EYE + I
Sbjct: 462 YFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSANLEYEIFMR-IR 520
Query: 469 EEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCR 528
+EV Y L +L+ +A DVL +F++ A + ++ C + L +++ R
Sbjct: 521 QEV----EKYIGRLQKLARTIATIDVLQAFAV---VAEQQHL-VCPRFTDQRELTIDRGR 572
Query: 529 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 587
H +VE + G +YIPN ++ + + L+TGPNM GKSTY+R + V V +AQ+G +VP
Sbjct: 573 HAVVEKVMGKQTYIPNSIHLNT-DTHMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPA 631
Query: 588 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 647
D A + + D IFTR+GAAD G STFM+EM E ++ T+ SL++ DELGRGT+T+
Sbjct: 632 DQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATY 691
Query: 648 DGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQV 707
DG +A SI + TLFATH+HE+ LS+ + NV VS LE++ + L+++
Sbjct: 692 DGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKI 751
Query: 708 KPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPSG 752
G KSYG+H AK+AG PE++L++A +++ +L+ + P+
Sbjct: 752 AQGPADKSYGIHVAKIAGMPEELLQRADRILQ----TLENQAPTA 792
>sp|C5D9H5|MUTS_GEOSW DNA mismatch repair protein MutS OS=Geobacillus sp. (strain WCH70)
GN=mutS PE=3 SV=1
Length = 860
Score = 266 bits (680), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 291/580 (50%), Gaps = 57/580 (9%)
Query: 212 DNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLL 271
D+M ++ +D+ +M + S ++ + S SLL +LD T G RLL
Sbjct: 239 DHMQSVQVYQVDH----YMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTAMGGRLL 294
Query: 272 AQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLK 331
QW+ +PL D I R V L+++ R L E LR + D++ LA R+ +
Sbjct: 295 KQWLDRPLLDRKQIERRLHMVETLIHHYFERQELRE-RLREVYDVERLAGRVAYGNVNAR 353
Query: 332 DCYRVYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSL-KMMDR------------- 377
D ++ + + Q+P L I+E L + EA L L L +++R
Sbjct: 354 DLIQLKKSLQQIPALKDIVEKLPDH-EAKQLANKLDPCSELVDLLERSIQENPPLSVKEG 412
Query: 378 ---KDAVMDKMKEY-------------LESTARRLNLVADKTIKLE-NSPQGFAYRITM- 419
KD + + Y LES R L + K++K+ N G+ +T
Sbjct: 413 NIIKDGYNETLDRYRDASRNGKAWIAQLESKERELTGI--KSLKIGYNRVFGYYIEVTKP 470
Query: 420 KLNNSIDDRYTILDTVRGGVRF-----QDDRLATANTQYQAIQREYETHQQSIVEEVIGI 474
L+ RY T+ RF ++ + ++I+ EYE I E V
Sbjct: 471 NLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFV-DIRERV--- 526
Query: 475 SAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVE- 533
Y L L+ +++ DVL SF A+ + YV+P L++ RHP+VE
Sbjct: 527 -KQYIPRLQSLAKTISELDVLQSF--ATVSEERHYVKPQFS--DNRELIIQAGRHPVVEK 581
Query: 534 LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATIS 593
+ G +Y+PND Y + E L+TGPNM GKSTY+R I ++V +AQIGCFVP + A +
Sbjct: 582 VLGAQTYVPNDCYM-NKERELLLITGPNMSGKSTYMRQIALTVIMAQIGCFVPAEKAVLP 640
Query: 594 VVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMA 653
+ DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+GRGTST+DG +A
Sbjct: 641 IFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGMALA 700
Query: 654 CSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCV 713
+I + H TLF+TH+HE+ L + + +NV V A+E+ +V L++++ G
Sbjct: 701 QAIIEYIHDHIGAKTLFSTHYHELTDLEQSLAKLKNVHVRAVEENGKVVFLHKIEEGPAD 760
Query: 714 KSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTK-TPSG 752
+SYG+H A++A P ++++A++++ E E K PSG
Sbjct: 761 QSYGIHVAELAELPASLIQRAKEILAELEQQEQRKEQPSG 800
>sp|B5E385|MUTS_STRP4 DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
serotype 19F (strain G54) GN=mutS PE=3 SV=1
Length = 844
Score = 265 bits (678), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 317/638 (49%), Gaps = 63/638 (9%)
Query: 147 RNKVCMTGRKKNEFSEEDLMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLE 206
+ + + G +E E+ L + +N ++ ++ ++ LL T L+ Y+
Sbjct: 169 KAREVVLGYDLSEEEEQILSRQMNLVLSYEKESFEDLHLLDLRLATVEQTASSKLLQYVH 228
Query: 207 LMNNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQ 266
+ + + + ++ M A +SL ++ + + S + SL +LD +T
Sbjct: 229 RTQMRELNHLKPVIRYEIKDFLQMDYATKASLDLV--ENARSGKKQGSLFWLLDETKTAM 286
Query: 267 GHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRK 326
G RLL W+ +PL D + IV+R V + +++ R +L + +L+G+ D++ LA R+
Sbjct: 287 GMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTD-SLKGVYDIERLASRVSFG 345
Query: 327 KAGLKDCYRVYEGVSQLPKLISILESLVQNVEA---SNLNTI--LSSLQSLKM------- 374
K KD ++ +S +P++ +ILE + Q A + L+ I L SL S +
Sbjct: 346 KTNPKDLLQLATTLSSVPRIRAILEGMEQPTLAYLIAQLDAIPELESLISAAIAPEAPHV 405
Query: 375 --------------MDRKDAVMDKMKEYL-ESTARRLNLVADKTIKLE-NSPQGFAYRIT 418
+D+ V + ++ E A+ T+K++ N G+ + +T
Sbjct: 406 ITDGGIIRTGFDETLDKYXCVXREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVT 465
Query: 419 MKLNNSIDDRYTILDTVRGGVRFQDDRLA------------TANTQYQAIQREYETHQQS 466
++ + T++ RF + LA +AN +Y+ R
Sbjct: 466 NSQLGNVPAHFFRKATLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMR-------- 517
Query: 467 IVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLV-LN 525
I EEV Y Q L L+ +A DVL S ++ + + +RP G S + +
Sbjct: 518 IREEV----GKYIQRLQALAQGIATVDVLQSLAVVAET--QHLIRP---EFGDDSQIDIR 568
Query: 526 QCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 584
+ RH +VE + G +YIPN + + + S L+TGPNM GKSTY+R + ++ +AQ+G +
Sbjct: 569 KGRHAVVEKVMGAQTYIPNTIQM-AEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSY 627
Query: 585 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 644
VP +SA + + D IFTR+GAAD G STFM+EM E I T+NSL++ DELGRGT
Sbjct: 628 VPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGT 687
Query: 645 STFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLL 704
+T+DG +A SI + H TLFATH+HE+ L + NV V+ LEQ+ + L
Sbjct: 688 ATYDGMALAQSIIEYIHEHIGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFL 747
Query: 705 YQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
++++PG KS G+H AK+AG P D+L +A ++ + E
Sbjct: 748 HKIEPGPADKSXGIHVAKIAGLPADLLARADKILXQLE 785
>sp|P0DC61|MUTS_STRPQ DNA mismatch repair protein MutS OS=Streptococcus pyogenes serotype
M3 (strain SSI-1) GN=mutS PE=3 SV=1
Length = 851
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 312/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>sp|P0DC60|MUTS_STRP3 DNA mismatch repair protein MutS OS=Streptococcus pyogenes serotype
M3 (strain ATCC BAA-595 / MGAS315) GN=mutS PE=3 SV=1
Length = 851
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 312/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>sp|B2G6E5|MUTS_LACRJ DNA mismatch repair protein MutS OS=Lactobacillus reuteri (strain
JCM 1112) GN=mutS PE=3 SV=1
Length = 881
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 270/536 (50%), Gaps = 41/536 (7%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L +LD +T G RLL +W+ +PL + +AI ER V L+++ R NL +
Sbjct: 270 SGKRQGTLAWLLDETKTAMGSRLLKRWIDRPLINQNAISERQDKVQELLDHYFERSNLQQ 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
++ + D++ LA R+ +D ++ + Q+PK+ +LE+L V L L
Sbjct: 330 ELIK-VYDLERLAGRVAYGSVNGRDLIQLKTSLKQVPKIKYVLETLDSPV-FEELQKQLD 387
Query: 368 SLQSLK-MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTI 404
L + ++D+ KD D++ +Y ++ + D K
Sbjct: 388 PLDDVADLIDQSIIEEPPIAVTEGGVIKDGYNDQLDQYRDAMNNGKQWIVDLQEHERKLT 447
Query: 405 KLENSPQG----FAYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+ N G F Y I + L+ DRY T+ RF L Q
Sbjct: 448 GINNLKIGYNHVFGYYIEVTKVNLDKLPKDRYERKQTLVNAERFSTPELKEKEALIMGAQ 507
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+ + I ++ G L +L+ LA+ DVL SF++ S +VRP M
Sbjct: 508 EKSTALEYDIFVKIREQVKGQITRLQKLAQQLAELDVLQSFAVVSEDYH--FVRP---EM 562
Query: 518 GTGS-LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
TG L + RHP+VE G Y+PNDV + L+TGPNM GKSTY+R + +
Sbjct: 563 NTGHVLKIKDGRHPVVEKFMGHQEYVPNDVLMGE-DTDILLITGPNMSGKSTYMRQLALI 621
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
+AQIGCFVP SA + + DQ+FTR+GAAD G STFM+EM E + T+ SL+
Sbjct: 622 AVMAQIGCFVPAKSAELPIFDQVFTRIGAADDLISGESTFMVEMMEANNALTHATDRSLI 681
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + H + TLF+TH+HE+ L + +NV V A
Sbjct: 682 LFDEIGRGTATYDGMALAQAIIEYVHQHVRAKTLFSTHYHELTALENSLARLKNVHVGAT 741
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
E++ LV L++V G KSYG+H AK+AG P +L++A ++++ E D K P+
Sbjct: 742 EKDGELVFLHKVSAGPADKSYGIHVAKLAGMPSSLLKRADTILQKLEQK-DVKLPN 796
>sp|A5VIW9|MUTS_LACRD DNA mismatch repair protein MutS OS=Lactobacillus reuteri (strain
DSM 20016) GN=mutS PE=3 SV=1
Length = 881
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 270/536 (50%), Gaps = 41/536 (7%)
Query: 248 SAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHE 307
S + +L +LD +T G RLL +W+ +PL + +AI ER V L+++ R NL +
Sbjct: 270 SGKRQGTLAWLLDETKTAMGSRLLKRWIDRPLINQNAISERQDKVQELLDHYFERSNLQQ 329
Query: 308 YALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLNTILS 367
++ + D++ LA R+ +D ++ + Q+PK+ +LE+L V L L
Sbjct: 330 ELIK-VYDLERLAGRVAYGSVNGRDLIQLKTSLKQVPKIKYVLETLDSPV-FEELQKQLD 387
Query: 368 SLQSLK-MMDR----------------KDAVMDKMKEYLESTARRLNLVAD------KTI 404
L + ++D+ KD D++ +Y ++ + D K
Sbjct: 388 PLDDVADLIDQSIIEEPPIAVTEGGVIKDGYNDQLDQYRDAMNNGKQWIVDLQEHERKLT 447
Query: 405 KLENSPQG----FAYRI---TMKLNNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQ 457
+ N G F Y I + L+ DRY T+ RF L Q
Sbjct: 448 GINNLKIGYNHVFGYYIEVTKVNLDKLPKDRYERKQTLVNAERFSTPELKEKEALIMGAQ 507
Query: 458 REYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPM 517
+ + I ++ G L +L+ LA+ DVL SF++ S +VRP M
Sbjct: 508 EKSTALEYDIFVKIREQVKGQITRLQKLAQQLAELDVLQSFAVVSEDYH--FVRP---EM 562
Query: 518 GTGS-LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 575
TG L + RHP+VE G Y+PNDV + L+TGPNM GKSTY+R + +
Sbjct: 563 NTGHVLKIKDGRHPVVEKFMGHQEYVPNDVLMGE-DTDILLITGPNMSGKSTYMRQLALI 621
Query: 576 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 635
+AQIGCFVP SA + + DQ+FTR+GAAD G STFM+EM E + T+ SL+
Sbjct: 622 AVMAQIGCFVPAKSAELPIFDQVFTRIGAADDLISGESTFMVEMMEANNALTHATDRSLI 681
Query: 636 IIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSRVIPTFRNVQVSAL 695
+ DE+GRGT+T+DG +A +I + H + TLF+TH+HE+ L + +NV V A
Sbjct: 682 LFDEIGRGTATYDGMALAQAIIEYVHQHVRAKTLFSTHYHELTALENSLARLKNVHVGAT 741
Query: 696 EQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYEYSLDTKTPS 751
E++ LV L++V G KSYG+H AK+AG P +L++A ++++ E D K P+
Sbjct: 742 EKDGELVFLHKVSAGPADKSYGIHVAKLAGMPSSLLKRADTILQKLEQK-DVKLPN 796
>sp|C4L191|MUTS_EXISA DNA mismatch repair protein MutS OS=Exiguobacterium sp. (strain
ATCC BAA-1283 / AT1b) GN=mutS PE=3 SV=1
Length = 842
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 285/540 (52%), Gaps = 60/540 (11%)
Query: 244 QGSTSAQTYDSLLGILDRCRTPQGHRLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARM 303
+ + S + SLL +LD T G RLL +W++QPL I ER AV LV++ R
Sbjct: 259 RSARSGERKGSLLSLLDETTTAMGGRLLKRWLEQPLYTEQGIRERQDAVENLVDDFMLRD 318
Query: 304 NLHEYALRGLPDMQSLAMRIGRKKAGLKDCYRVYEGVSQLPKLISILESLVQNVEASNLN 363
L E L+ + D++ L ++G A +D ++ + + ++P + SL+Q V+A L
Sbjct: 319 QLQE-ELKRVYDIERLVAKVGYGTANARDLVQLRDTLERMPSV----RSLLQTVKADRLQ 373
Query: 364 TILSSLQSLKMMDR--------------KDAVM------DKMKEYLESTARRLNLVAD-- 401
I +L S + + K+ M D++ E LE+ A + +A+
Sbjct: 374 QIEQNLDSFETLSEQLRAALVDSPPISTKEGGMIRHGYSDELDELLEAKANGKSWIANLE 433
Query: 402 ---------KTIKLE-NSPQGFAYRITMKLNNSI--DDRYTILDTVRGGVRF-----QDD 444
K++K+ N G+ +T K N + + RY T+ R+ ++
Sbjct: 434 QQERIATGIKSLKVGYNRVFGYYLEVT-KANAKLLEEGRYERKQTLTNAERYITPELKEK 492
Query: 445 RLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLSDVLAQFDVLVSFSIASTC 504
+ ++ EY+ ++ EEV YT+ L QL+ L++ DVL++ ++
Sbjct: 493 EALILGAEEKSCTLEYDLFV-ALREEV----KTYTKPLQQLARSLSELDVLLALAV--VA 545
Query: 505 APKPYVRPCMKPMGTGSLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNM 562
+ YVRP T + + + RHP++E L G Y+ ND+ L+TGPNM
Sbjct: 546 EKREYVRPVT----TSHVQIERGRHPVIETVLPRG-EYVANDLTLDDTR-QMLLITGPNM 599
Query: 563 GGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKET 622
GKSTY+R + L QIG FVP ++A + + D+IFTR+GAAD G STFM+EM ET
Sbjct: 600 SGKSTYMRQFALIAILHQIGSFVPAEAAELPLFDRIFTRIGAADDLVSGQSTFMVEMTET 659
Query: 623 ATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQPFTLFATHFHEIALLSR 682
+ + T NSL+++DE+GRGTST+DG +A +I +AS TLF+TH+HE+ +L
Sbjct: 660 RQAVTEATSNSLILLDEIGRGTSTYDGMALAQAIVEYIASSIGAKTLFSTHYHELTVLED 719
Query: 683 VIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAGYPEDMLEQARDLMKEYE 742
IP+ NV V A+E++ +V L++V PG KSYG+H A++A P+ ++++AR ++ E E
Sbjct: 720 SIPSLENVHVRAIERDGRVVFLHEVHPGRADKSYGIHVAELAELPDSLIDRARTILSELE 779
>sp|Q99XL8|MUTS_STRP1 DNA mismatch repair protein MutS OS=Streptococcus pyogenes serotype
M1 GN=mutS PE=3 SV=1
Length = 851
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 312/617 (50%), Gaps = 42/617 (6%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
+LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KILATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTNLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE 742
P+ +L++A +++ E
Sbjct: 769 LPKSLLKRADEVLTRLE 785
>sp|B5XJ75|MUTS_STRPZ DNA mismatch repair protein MutS OS=Streptococcus pyogenes serotype
M49 (strain NZ131) GN=mutS PE=3 SV=1
Length = 851
Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/653 (28%), Positives = 327/653 (50%), Gaps = 53/653 (8%)
Query: 159 EFSEED---LMQDVNRLVRFDDSELKNARLLPEMCLTTATHCLRSLINYLELMNNEDNMN 215
+ SEE+ L++ +N L+ ++++ ++ L+ T L+ Y+ + +
Sbjct: 178 DLSEEEQTILVKQMNLLLSYEETVYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSH 237
Query: 216 QFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGHRLLAQWM 275
++ + Y+ MS A SSL ++ + + + + + SL +LD +T G RLL W+
Sbjct: 238 LQALVHYEIKDYLQMSYATKSSLDLV--ENARTNKKHGSLYWLLDETKTAMGMRLLRSWI 295
Query: 276 KQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKAGLKDCYR 335
+PL +AI+ER + + +N R +L +L+G+ D++ L+ R+ KA KD +
Sbjct: 296 DRPLVSKEAILERQEIIQVFLNAFIERTDLSN-SLKGVYDIERLSSRVSFGKANPKDLLQ 354
Query: 336 VYEGVSQLPKLISILESLVQNVEASNLNTILSSLQSLKMMDR-----------------K 378
+ ++Q+P + +ILES +N I SL L+ + R +
Sbjct: 355 LGHTLAQVPYIKAILESFDSPCVDKLVNDI-DSLPELEYLIRTAIDPDAPATISEGSIIR 413
Query: 379 DAVMDKMKEYLESTARRLNLVAD-----------KTIKLE-NSPQGFAYRITMKLNNSID 426
+ +++ Y + +AD +K++ N G+ + +T + +
Sbjct: 414 NGFDERLDHYRKVMREGTGWIADIEAKERQESGINNLKIDYNKKDGYYFHVTNSNLSLVP 473
Query: 427 DRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQTLNQLS 486
+ + T++ R+ LA Q + E + + I + Y L +L+
Sbjct: 474 EHFFRKATLKNSERYGTAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLA 533
Query: 487 DVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGV-SYIPNDV 545
LA DVL S ++ + Y+RP + + + RH +VE GV YIPN +
Sbjct: 534 KTLATVDVLQSLAVVAET--NHYIRPQFN--DNHVITIQEGRHAVVEKVMGVQEYIPNSI 589
Query: 546 YFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAA 605
F + S L+TGPNM GKSTY+R + ++V +AQ+G FV D + + D IFTR+GAA
Sbjct: 590 SFDQ-QTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAA 648
Query: 606 DSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASHRQ 665
D G STFM+EM E IK+ ++NSL++ DELGRGT+T+DG +A +I +
Sbjct: 649 DDLISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAIIEYIHDRVG 708
Query: 666 PFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCAKMAG 725
T+FATH+HE+ LS + + NV V+ LE++ ++ L+++ G KSYG+H AK+AG
Sbjct: 709 AKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKIAEGPADKSYGIHVAKIAG 768
Query: 726 YPEDMLEQARDLMKEYE-YSLDTK---TPSGDETNNREEEYFKTVQEGEYQMF 774
P+ +L++A +++ E S T+ PS E++N V++G+ +F
Sbjct: 769 LPKSLLKRADEVLTRLETQSRSTEIISVPSQVESSN-------AVRQGQLSLF 814
>sp|B3H2J9|MUTS_ACTP7 DNA mismatch repair protein MutS OS=Actinobacillus pleuropneumoniae
serotype 7 (strain AP76) GN=mutS PE=3 SV=1
Length = 864
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 206/697 (29%), Positives = 344/697 (49%), Gaps = 59/697 (8%)
Query: 90 GVAIVDLDTKKFYMGEIPDDDYYSNLEAIIVQKSPKECLLPAEYLNDNKNKIVTILDRNK 149
+A +D+ + +F + E+P N EA+ + + LLPAE L IL+ K
Sbjct: 142 AIATLDMTSGRFLITELP------NKEALAAEL---QRLLPAEILYAEDFSAAEILNNYK 192
Query: 150 VCMTGRKKNEFSEEDLMQDVNRLVR-FDDSELKNARLLPEMCLTTATHCLRSLINYLELM 208
G ++ E +L+ +N L R F L + + A C+ ++Y +
Sbjct: 193 ----GLRRRPVWEFELVTAINLLNRQFGTQSLAGFGVEKAVVALCAAGCV---LHYAQET 245
Query: 209 NNEDNMNQFSIHSIDYSKYVHMSSAVMSSLHVLPQQGSTSAQTYDSLLGILDRCRTPQGH 268
+ SIH S V + +A +L + + + T ++L +LD+C TP G
Sbjct: 246 QRTALPHINSIHLAQNSDTVLLDAATRRNLEL---TQNLAGGTENTLAAVLDKCVTPMGS 302
Query: 269 RLLAQWMKQPLKDLDAIVERHAAVNILVNNTEARMNLHEYALRGLPDMQSLAMRIGRKKA 328
RLL +W+ QP++DL+ + +R ++ L E R+ L + L+ + DM+ + R+ + A
Sbjct: 303 RLLKRWIHQPIRDLEKLKKRQDIIDTL--QKEQRIELLQPLLQNVGDMERILARVALRSA 360
Query: 329 GLKDCYRVYEGVSQLP-------KLISILESLVQNV-EASNLNTIL--SSLQSLKMMDRK 378
+D R+ ++QLP L + L++LV + + S L+ +L + +++ + R
Sbjct: 361 RPRDLTRLRTALAQLPDIAKNAKNLTASLDALVAQIGDFSELHALLERAIIETPPQLIRD 420
Query: 379 DAV--------MDKMKE-------YLESTA-RRLNLVADKTIKLE-NSPQGFAYRITMKL 421
V +D+ +E YLE+ R T+K+ N+ G+ +I+
Sbjct: 421 GGVIAEGYNAELDEWRELSAGATQYLENLEIREREATGIDTLKIGFNAVHGYYIQISQGQ 480
Query: 422 NNSIDDRYTILDTVRGGVRFQDDRLATANTQYQAIQREYETHQQSIVEEVIGISAGYTQT 481
+ Y T++ R+ L T + + ++ + +E+ +
Sbjct: 481 AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDLLMPRLGE 540
Query: 482 LNQLSDVLAQFDVLVSFSIASTCAPKPYVRPCMKPMGTGSLVLNQCRHPIVELQGGVSYI 541
+ + L++ DVL + +A YVRP + G + + RHP+VE +I
Sbjct: 541 MQLAAMALSELDVLTN--LAERAESLNYVRPTFS-LQRG-VNIKGGRHPVVEQVLKDPFI 596
Query: 542 PNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTR 601
N V+ + + +VTGPNMGGKSTY+R I + +A IG FVP DSA I +D+IFTR
Sbjct: 597 ANPVFLNA-QRHLLVVTGPNMGGKSTYMRQIALISLMAYIGSFVPADSAEIGALDRIFTR 655
Query: 602 VGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELA 661
+GA+D G STFM+EM E A ++ + TENSLV+IDE+GRGTST+DG +A + A LA
Sbjct: 656 IGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLA 715
Query: 662 SHRQPFTLFATHFHEIALLSRVIPTFRNVQVSALEQEDNLVLLYQVKPGSCVKSYGVHCA 721
Q TLFATH+ E+ L + NV + A E +D++V ++ V+ G+ KSYG+ A
Sbjct: 716 KKTQSLTLFATHYFELTSLPSQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVA 775
Query: 722 KMAGYPEDMLEQARDLMKEY-EYSLDTK----TPSGD 753
+AG P+ +++ A+ + E SL TK P GD
Sbjct: 776 ALAGVPKQVIQLAKQRLAHLEEISLQTKEAHDNPQGD 812
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 286,092,729
Number of Sequences: 539616
Number of extensions: 11951845
Number of successful extensions: 36579
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 33847
Number of HSP's gapped (non-prelim): 1320
length of query: 813
length of database: 191,569,459
effective HSP length: 126
effective length of query: 687
effective length of database: 123,577,843
effective search space: 84897978141
effective search space used: 84897978141
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)