Query psy5295
Match_columns 248
No_of_seqs 107 out of 113
Neff 4.1
Searched_HMMs 13730
Date Fri Aug 16 22:54:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5295.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5295hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1imta2 g.3.10.1 (A:37-80) Int 19.8 18 0.0013 22.9 1.1 18 65-88 8-25 (44)
2 d2ef1a1 c.23.14.3 (A:45-291) A 16.6 53 0.0039 27.2 3.8 47 44-92 147-193 (247)
3 d1udza_ b.51.1.1 (A:) Isoleucy 12.3 20 0.0014 27.5 -0.2 16 45-60 104-119 (179)
4 d1nera_ a.35.1.2 (A:) Ner {Bac 10.4 52 0.0038 22.6 1.6 18 221-238 46-63 (74)
5 d1plsa_ b.55.1.1 (A:) Pleckstr 9.9 42 0.0031 22.1 0.9 25 173-197 88-113 (113)
6 d1ffya2 b.51.1.1 (A:201-394) I 9.8 17 0.0012 27.9 -1.4 15 46-60 113-127 (194)
7 d1z7aa1 c.6.2.6 (A:4-304) Hypo 8.8 1.3E+02 0.0098 24.3 3.9 56 173-240 105-160 (301)
8 d1wkaa1 b.51.1.1 (A:195-337) V 7.7 40 0.0029 25.1 -0.0 20 173-192 123-142 (143)
9 d1xd7a_ a.4.5.55 (A:) Hypothet 7.5 1.3E+02 0.0098 20.8 3.0 40 175-228 36-75 (127)
10 d1qk1a1 a.83.1.1 (A:1-102) Cre 7.4 46 0.0033 24.1 0.2 20 221-240 80-100 (102)
No 1
>d1imta2 g.3.10.1 (A:37-80) Intestinal toxin 1 {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]}
Probab=19.75 E-value=18 Score=22.93 Aligned_cols=18 Identities=39% Similarity=0.763 Sum_probs=14.8
Q ss_pred CCCCccccchHhhhhhhhcCCCCC
Q psy5295 65 GSTEVPLIGKTLIRSFREHHVDPT 88 (248)
Q Consensus 65 Gs~~tPi~G~~fIr~FreHH~~P~ 88 (248)
+|.+.|++|| |.||.-|-
T Consensus 8 ~ShKVPf~gk------R~HHtCPC 25 (44)
T d1imta2 8 ASHKIPFSGQ------RMHHTCPC 25 (44)
T ss_dssp TCCCSSCCSC------CCSSCCCB
T ss_pred ccccCCcCcc------cccccCCc
Confidence 5778999997 68998884
No 2
>d2ef1a1 c.23.14.3 (A:45-291) ADP ribosyl cyclase {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.59 E-value=53 Score=27.21 Aligned_cols=47 Identities=21% Similarity=0.237 Sum_probs=36.7
Q ss_pred HHHHHHhhccceeeEEeeecCCCCCccccchHhhhhhhhcCCCCCcchh
Q psy5295 44 VVGILTADFASGFVHWCADTWGSTEVPLIGKTLIRSFREHHVDPTSITR 92 (248)
Q Consensus 44 ~~g~l~ADf~SGlvHW~~Dt~Gs~~tPi~G~~fIr~FreHH~~P~aITr 92 (248)
.+....|.-++|+||..++ ||.+.|+--+.+-..+-.++-+|..+++
T Consensus 147 ~AS~~fA~~A~G~v~VmLN--GS~~~af~~~s~Fg~vElp~L~~~kV~~ 193 (247)
T d2ef1a1 147 TVSRRFAEAACDVVHVMLN--GSRSKIFDKNSTFGSVEVHNLQPEKVQT 193 (247)
T ss_dssp HHHHHHHHHCCEEEEEEEE--TTSTTSSCSSSHHHHTTGGGSCTTTEEE
T ss_pred HHHHHHHHHcCCcEEEEEC--CCCCcCcCCCCeeeeEEcccCCccceee
Confidence 3455677889999999998 6676666555666778889999999988
No 3
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]}
Probab=12.32 E-value=20 Score=27.50 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=13.2
Q ss_pred HHHHHhhccceeeEEe
Q psy5295 45 VGILTADFASGFVHWC 60 (248)
Q Consensus 45 ~g~l~ADf~SGlvHW~ 60 (248)
+-|++.|.++|+||.+
T Consensus 104 ad~V~~~~GTG~Vh~a 119 (179)
T d1udza_ 104 ADYVSQEDGTGIVHQA 119 (179)
T ss_dssp CTTCCSSSSCSEEEEC
T ss_pred ccccCccccCcceeee
Confidence 3578899999999974
No 4
>d1nera_ a.35.1.2 (A:) Ner {Bacteriophage mu [TaxId: 10677]}
Probab=10.42 E-value=52 Score=22.62 Aligned_cols=18 Identities=28% Similarity=0.606 Sum_probs=16.5
Q ss_pred chHHHHHHHHHHhcCCCC
Q psy5295 221 FWPHLESVVTFVTGYKPR 238 (248)
Q Consensus 221 fw~~lE~~i~~~tG~~PR 238 (248)
=|++-|++|-...|+.|-
T Consensus 46 p~pKgEriIA~aLg~~P~ 63 (74)
T d1nera_ 46 HWPKGEQIIANALETKPE 63 (74)
T ss_dssp SCHHHHHHHHHHTTSCHH
T ss_pred CChHHHHHHHHHHCcCHH
Confidence 599999999999999983
No 5
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.91 E-value=42 Score=22.11 Aligned_cols=25 Identities=28% Similarity=0.420 Sum_probs=17.2
Q ss_pred CCcHHHHHHHhC-ccccCCccccccC
Q psy5295 173 SLPRWVLFLQDC-HLILPRRHHRYHH 197 (248)
Q Consensus 173 ~lP~~V~~LQ~~-glllsr~hH~~HH 197 (248)
+.-.|+..|+++ .-+-+..+|..||
T Consensus 88 e~~~Wi~ai~~ai~~~~~~~~~~~~~ 113 (113)
T d1plsa_ 88 ERDAWVRDINKAIKCIEGLEHHHHHH 113 (113)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred HHHHHHHHHHHHHHhCcCCCCcCCCC
Confidence 566788888886 5555556666666
No 6
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=9.83 E-value=17 Score=27.86 Aligned_cols=15 Identities=33% Similarity=0.432 Sum_probs=12.6
Q ss_pred HHHHhhccceeeEEe
Q psy5295 46 GILTADFASGFVHWC 60 (248)
Q Consensus 46 g~l~ADf~SGlvHW~ 60 (248)
-|+++|.+||+||.+
T Consensus 113 d~V~~~~GTGiVh~a 127 (194)
T d1ffya2 113 DHVTTDAGTGCVHTA 127 (194)
T ss_dssp CSSCCSSSCSCCCBC
T ss_pred ceeecccCCcceeee
Confidence 467899999999974
No 7
>d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=8.81 E-value=1.3e+02 Score=24.32 Aligned_cols=56 Identities=13% Similarity=0.026 Sum_probs=36.4
Q ss_pred CCcHHHHHHHhCccccCCccccccCCCCCCCceeeecccchhhhhhhcchHHHHHHHHHHhcCCCCcc
Q psy5295 173 SLPRWVLFLQDCHLILPRRHHRYHHVAPHETYYCITTGWLNWPLEQIRFWPHLESVVTFVTGYKPRTD 240 (248)
Q Consensus 173 ~lP~~V~~LQ~~glllsr~hH~~HH~aPh~~~YCI~tGw~N~~Ld~i~fw~~lE~~i~~~tG~~PR~d 240 (248)
.-|..|+.+++.|-= =..|+..|..+. + +++-= .-..-++-..++++.||.+|+.+
T Consensus 105 ~~P~~v~~i~~~GhE--i~~HG~~h~~~~--------~-l~~~~-e~~~i~~~~~~l~~~tG~~p~G~ 160 (301)
T d1z7aa1 105 RNPEVIRAMVADGHE--ICSHGYRWIDYQ--------Y-MDEAQ-EREHMLEAIRILTELTGQRPVGW 160 (301)
T ss_dssp HCHHHHHHHHHTTCE--EEECCSSSSCCT--------T-CCHHH-HHHHHHHHHHHHHHHHSSCCCEE
T ss_pred HChHHHHHHHHcCce--eecCcccccccc--------c-CCHHH-HHHHHHHHHHHHHHhccCCcccc
Confidence 469999999998841 135666665322 1 23332 23444666678899999999876
No 8
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]}
Probab=7.69 E-value=40 Score=25.10 Aligned_cols=20 Identities=5% Similarity=0.140 Sum_probs=14.9
Q ss_pred CCcHHHHHHHhCccccCCcc
Q psy5295 173 SLPRWVLFLQDCHLILPRRH 192 (248)
Q Consensus 173 ~lP~~V~~LQ~~glllsr~h 192 (248)
.+...|..|++.|+++....
T Consensus 123 A~~~Ii~~L~~~gll~k~e~ 142 (143)
T d1wkaa1 123 ARRKAVELFREAGHLVKEED 142 (143)
T ss_dssp HHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHhCCCEEeeec
Confidence 46788888888888875443
No 9
>d1xd7a_ a.4.5.55 (A:) Hypothetical protein ywnA {Bacillus subtilis [TaxId: 1423]}
Probab=7.55 E-value=1.3e+02 Score=20.79 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=27.1
Q ss_pred cHHHHHHHhCccccCCccccccCCCCCCCceeeecccchhhhhhhcchHHHHHH
Q psy5295 175 PRWVLFLQDCHLILPRRHHRYHHVAPHETYYCITTGWLNWPLEQIRFWPHLESV 228 (248)
Q Consensus 175 P~~V~~LQ~~glllsr~hH~~HH~aPh~~~YCI~tGw~N~~Ld~i~fw~~lE~~ 228 (248)
-+.++.|.+.|++-|.+-++. |+++.+.++|..+.-+|-+
T Consensus 36 ~kIl~~L~~aglV~s~rG~~G--------------GyLar~p~~Itl~dI~~av 75 (127)
T d1xd7a_ 36 RRMISLLKKADILTSRAGVPG--------------ASLKKDPADISLLEVYRAV 75 (127)
T ss_dssp HHHHHHHHHTTSEECCSSSSS--------------CEESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHhCcccccCCCCC--------------ccccCCHHhCcHHHHHHHH
Confidence 357778999999998765321 5556677777766555443
No 10
>d1qk1a1 a.83.1.1 (A:1-102) Creatine kinase, N-domain {Human (Homo sapiens), mitochondria [TaxId: 9606]}
Probab=7.40 E-value=46 Score=24.11 Aligned_cols=20 Identities=35% Similarity=0.549 Sum_probs=15.1
Q ss_pred chHHHHHHHHHHh-cCCCCcc
Q psy5295 221 FWPHLESVVTFVT-GYKPRTD 240 (248)
Q Consensus 221 fw~~lE~~i~~~t-G~~PR~d 240 (248)
|=+.+..||+..- |.+|+.|
T Consensus 80 F~~lFdpvI~dyH~G~~p~~~ 100 (102)
T d1qk1a1 80 FADLFDPVIQERHNGYDPRTM 100 (102)
T ss_dssp THHHHHHHHHHHTTTCCTTTC
T ss_pred HHHHHHHHHHHHcCCCCCCcC
Confidence 4456788888887 8999865
Done!