BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5297
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P43246|MSH2_HUMAN DNA mismatch repair protein Msh2 OS=Homo sapiens GN=MSH2 PE=1 SV=1
Length = 934
Score = 224 bits (570), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 133/174 (76%)
Query: 2 GTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
G G ++L RH VE+Q +++IPNDVYF+ + F+++TGPNMGGKSTYIR GV V
Sbjct: 628 GQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVL 687
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
+AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+II
Sbjct: 688 MAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIII 747
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT N+H
Sbjct: 748 DELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLH 801
>sp|Q5XXB5|MSH2_CHLAE DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops GN=MSH2
PE=2 SV=1
Length = 933
Score = 223 bits (567), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 133/174 (76%)
Query: 2 GTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
G G ++L RH VE+Q +++IPND+YF+ + F+++TGPNMGGKSTYIR GV V
Sbjct: 628 GQGRIILKASRHACVEVQDEITFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVL 687
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
+AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+II
Sbjct: 688 MAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIII 747
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT N+H
Sbjct: 748 DELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLH 801
>sp|P54275|MSH2_RAT DNA mismatch repair protein Msh2 OS=Rattus norvegicus GN=Msh2 PE=2
SV=1
Length = 933
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 134/174 (77%)
Query: 2 GTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
G G +++ RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKSTYIR GV V
Sbjct: 628 GKGRIIVKASRHACVEVQHDVAFIPNDVHFEKDKQMFHIITGPNMGGKSTYIRQTGVIVL 687
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
+AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+II
Sbjct: 688 MAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIII 747
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DELGRGTST+DGFG+A +I+ +A+N F +FATHFHE+ L+ IPT N+H
Sbjct: 748 DELGRGTSTYDGFGLAWAISEYIATNIGAFCMFATHFHELTALASQIPTVNNLH 801
>sp|P43247|MSH2_MOUSE DNA mismatch repair protein Msh2 OS=Mus musculus GN=Msh2 PE=2 SV=1
Length = 935
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 133/174 (76%)
Query: 2 GTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
G G ++L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKSTYIR GV V
Sbjct: 628 GKGRIILKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKSTYIRQTGVIVL 687
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
+AQIGCFVPC+SA +S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+II
Sbjct: 688 MAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIII 747
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT N+H
Sbjct: 748 DELGRGTSTYDGFGLAWAISDYIATKIGAFCMFATHFHELTALANQIPTVNNLH 801
>sp|Q3MHE4|MSH2_BOVIN DNA mismatch repair protein Msh2 OS=Bos taurus GN=MSH2 PE=2 SV=1
Length = 934
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 131/174 (75%)
Query: 2 GTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
G G + L RH VE+Q V++IPNDV+F+ + F+++TGPNMGGKSTYIR GV V
Sbjct: 628 GRGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKSTYIRQTGVVVL 687
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
+AQIGCFVPC+ A +S+VD I RVGA DSQ +G+STFM EM ETA++++ T++SL+II
Sbjct: 688 MAQIGCFVPCEWAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIII 747
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DELGRGTST+DGFG+A +I+ +A+ F +FATHFHE+ L+ IPT N+H
Sbjct: 748 DELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLH 801
>sp|P25847|MSH2_YEAST DNA mismatch repair protein MSH2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MSH2 PE=1 SV=2
Length = 964
Score = 218 bits (554), Expect = 3e-56, Method: Composition-based stats.
Identities = 95/164 (57%), Positives = 128/164 (78%)
Query: 12 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 71
RHP++E+Q +S+I NDV +SG+ F ++TGPNMGGKSTYIR +GV +AQIGCFVPC
Sbjct: 657 RHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPC 716
Query: 72 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 131
+ A I++VD I RVGA DSQ +G+STFM+E+ ETA+++K ++NSL+I+DELGRGTST+
Sbjct: 717 EEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELGRGTSTY 776
Query: 132 DGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DGFG+A +IA +AS F LFATHFHE+ LS +P +N+H
Sbjct: 777 DGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMH 820
>sp|Q553L4|MSH2_DICDI DNA mismatch repair protein Msh2 OS=Dictyostelium discoideum
GN=msh2 PE=3 SV=1
Length = 937
Score = 216 bits (549), Expect = 9e-56, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Query: 2 GTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
G GT+++ RHP VE+Q V++I ND+ G+ F ++TGPNMGGKST+IR +G+ V
Sbjct: 667 GAGTVIIGG-RHPCVEIQDNVNFIANDIDLTRGQSQFQIITGPNMGGKSTFIRQVGLIVL 725
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
+AQIGCFVP ATI+VVD I +RVGA DSQ RG+STFM EM ET+ ++K T+NSL+II
Sbjct: 726 MAQIGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVATKNSLIII 785
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHES 177
DELGRGTST+DGFG+A IA + + F LFATHFHE+ +LS ++P +N+H S
Sbjct: 786 DELGRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILSDLLPMVKNLHVS 841
>sp|O13396|MSH2_NEUCR DNA mismatch repair protein msh-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=msh-2 PE=3 SV=1
Length = 937
Score = 211 bits (538), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 124/174 (71%)
Query: 2 GTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
GTG VL + RHP +E+Q V++I NDV + SF ++TGPNMGGKSTYIR IGV
Sbjct: 618 GTGRTVLTEARHPCMEVQDDVTFITNDVTLTREDSSFLIITGPNMGGKSTYIRQIGVIAL 677
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
+AQIGCFVPC SA +++ D I RVGA+DSQ +G+STFM EM ETA ++K T SL+II
Sbjct: 678 MAQIGCFVPCSSAELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIII 737
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DELGRGTST+DGFG+A +I+ + F LFATHFHE+ L+ P +N+H
Sbjct: 738 DELGRGTSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTALADQYPNVKNLH 791
>sp|P43248|MSH2_DROME DNA mismatch repair protein spellchecker 1 OS=Drosophila
melanogaster GN=spel1 PE=3 SV=4
Length = 917
Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 126/174 (72%)
Query: 2 GTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
G LVL RHP +ELQ V++I N V FK E + ++TGPNMGGKSTYIRS+G +V
Sbjct: 626 GARELVLEDVRHPCLELQEHVNFIANSVDFKKEECNMFIITGPNMGGKSTYIRSVGTAVL 685
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
+A IG FVPC ATIS+VD I RVGA+D+ +G+STFM+EM ET+ +I+ T+ SLVII
Sbjct: 686 MAHIGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVII 745
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DELGRGTST++G G+A SIA LA + FTLFATHFHEI L+ + T +N H
Sbjct: 746 DELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLSTVKNCH 799
>sp|O74773|MSH2_SCHPO DNA mismatch repair protein msh2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=msh2 PE=3 SV=2
Length = 982
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 122/175 (69%)
Query: 6 LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 65
L L Q RHP +E Q V +IPNDV + G ++TGPNMGGKSTYIR +GV +AQI
Sbjct: 684 LYLKQARHPCLEAQDDVKFIPNDVNLEHGSSELLIITGPNMGGKSTYIRQVGVITVMAQI 743
Query: 66 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 125
GC VPC+ A + ++D I RVGA+DSQ +GISTFM EM ETAT+++ T SL+IIDELG
Sbjct: 744 GCPVPCEVADLDIIDAILARVGASDSQLKGISTFMAEMLETATILRAATPRSLIIIDELG 803
Query: 126 RGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHESKYL 180
RGTST DGFG+A +I + + F LFATH+HE+ LS I T +N+H + Y+
Sbjct: 804 RGTSTTDGFGLAWAITEHIVTQIGCFCLFATHYHEMTKLSEEITTVKNLHVTAYV 858
>sp|O24617|MSH2_ARATH DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana GN=MSH2
PE=1 SV=1
Length = 937
Score = 203 bits (517), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 120/164 (73%)
Query: 4 GTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 63
G +VL RHP VE Q V++IPND G+ F +VTGPNMGGKST+IR +GV V +A
Sbjct: 627 GDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVTGPNMGGKSTFIRQVGVIVLMA 686
Query: 64 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 123
Q+G FVPCD A+IS+ D IF RVGA D Q RG+STFM EM ETA+++K ++ SL+IIDE
Sbjct: 687 QVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDE 746
Query: 124 LGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRV 167
LGRGTST+DGFG+A +I L ++ TLFATHFHE+ L++
Sbjct: 747 LGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELTALAQA 790
>sp|Q9XGC9|MSH2_MAIZE DNA mismatch repair protein MSH2 OS=Zea mays GN=MUS1 PE=3 SV=1
Length = 942
Score = 199 bits (507), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 126/182 (69%), Gaps = 5/182 (2%)
Query: 4 GTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 63
G +VL RHP +E Q GV++IPND G+ F ++TGPNMGGKST+IR +GV+V +A
Sbjct: 628 GDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQVGVNVLMA 687
Query: 64 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 123
Q+G FVPCD A+ISV D IF RVGA D Q G+STFM EM ETA+++K ++ SL+IIDE
Sbjct: 688 QVGSFVPCDQASISVRDCIFARVGAGDCQLHGVSTFMQEMLETASILKGASDKSLIIIDE 747
Query: 124 LGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHESKYLYHT 183
LGRGTST+DGFG+A +I L + TLFATHFHE+ L+ RN E +++
Sbjct: 748 LGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFHELTALAH-----RNDDEHQHISDI 802
Query: 184 NV 185
V
Sbjct: 803 GV 804
>sp|A6SXI2|MUTS_JANMA DNA mismatch repair protein MutS OS=Janthinobacterium sp. (strain
Marseille) GN=mutS PE=3 SV=1
Length = 882
Score = 179 bits (453), Expect = 1e-44, Method: Composition-based stats.
Identities = 89/173 (51%), Positives = 115/173 (66%), Gaps = 2/173 (1%)
Query: 5 TLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 64
T+ + Q RHP+VE +I ND S E L+TGPNMGGKSTY+R + + LA
Sbjct: 599 TITIEQGRHPVVE-NHIERFIANDCLLSS-ECKLLLITGPNMGGKSTYMRQVALITLLAY 656
Query: 65 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 124
+G FVP SA I +D+IFTR+GAAD G STFM+EM E+A ++ TENSLV++DE+
Sbjct: 657 VGSFVPASSAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLMDEV 716
Query: 125 GRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHES 177
GRGTSTFDG +A +IA+ L N + FTLFATH+ E+ L + PT NVH S
Sbjct: 717 GRGTSTFDGLALAWAIAKHLIDNTKSFTLFATHYFELTQLPEIHPTAANVHLS 769
>sp|A4G717|MUTS_HERAR DNA mismatch repair protein MutS OS=Herminiimonas arsenicoxydans
GN=mutS PE=3 SV=3
Length = 893
Score = 176 bits (447), Expect = 6e-44, Method: Composition-based stats.
Identities = 89/173 (51%), Positives = 116/173 (67%), Gaps = 2/173 (1%)
Query: 5 TLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 64
T+ + Q RHP+VE +I ND + E L+TGPNMGGKSTY+R + + LA
Sbjct: 605 TIAIEQGRHPVVE-NHIERFIANDCLLNN-ESRLLLITGPNMGGKSTYMRQVALITLLAY 662
Query: 65 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 124
+G FVP SATI +D+IFTR+GAAD G STFM+EM E+A ++ TENSLV++DE+
Sbjct: 663 VGSFVPATSATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLVLMDEV 722
Query: 125 GRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHES 177
GRGTSTFDG +A +IAR L + + FTLFATH+ E+ L V P+ NVH S
Sbjct: 723 GRGTSTFDGLALAWAIARHLIDSTRSFTLFATHYFELTQLPEVHPSAANVHLS 775
>sp|B0S1C1|MUTS_FINM2 DNA mismatch repair protein MutS OS=Finegoldia magna (strain ATCC
29328) GN=mutS PE=3 SV=1
Length = 856
Score = 174 bits (442), Expect = 2e-43, Method: Composition-based stats.
Identities = 82/172 (47%), Positives = 119/172 (69%), Gaps = 1/172 (0%)
Query: 4 GTLVLNQCRHPIVELQGGVS-YIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 62
G + + + RHPIVEL G S +I ND+ SG+ L+TGPNM GKSTY+R + + L
Sbjct: 569 GLIDVLESRHPIVELSVGQSEFITNDILIGSGKNDIQLITGPNMSGKSTYLRQVALICIL 628
Query: 63 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 122
QIG FVP A IS+VD+IFTR+G++D+ ++G STFM+EMKE + +IK T NSL+++D
Sbjct: 629 NQIGSFVPATKANISIVDKIFTRIGSSDNLFKGESTFMVEMKEMSNIIKYATSNSLLVLD 688
Query: 123 ELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNV 174
E+GRGTST+DG +A +I ++ + + TLFATH+HE+ L + + N+
Sbjct: 689 EIGRGTSTYDGLSLAWAIVEYISKDIKAKTLFATHYHELTELEKKLDNLINM 740
>sp|A6TR79|MUTS_ALKMQ DNA mismatch repair protein MutS OS=Alkaliphilus metalliredigens
(strain QYMF) GN=mutS PE=3 SV=1
Length = 880
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Query: 10 QCRHPIVELQ-GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCF 68
+ RHP+VEL S++PND Y + + S +++TGPNM GKSTY+R + + V +AQIG F
Sbjct: 590 EGRHPVVELTFNKESFVPNDTYMDNRDCSMSIITGPNMAGKSTYMRQVALIVLMAQIGSF 649
Query: 69 VPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGT 128
VP A+I +VD+IFTR+GA+D +G STFM+EM E A ++ T NSLVI+DE+GRGT
Sbjct: 650 VPASEASIGIVDRIFTRIGASDDLAQGHSTFMVEMSEMANILNNATANSLVILDEIGRGT 709
Query: 129 STFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRN 173
STFDG +A ++ + ++ TLF+TH+HE+ L I +N
Sbjct: 710 STFDGLSIAWAVIEYMQQYKKSKTLFSTHYHELTELEGKIQGVKN 754
>sp|Q5L0E5|MUTS_GEOKA DNA mismatch repair protein MutS OS=Geobacillus kaustophilus
(strain HTA426) GN=mutS PE=3 SV=1
Length = 896
Score = 173 bits (439), Expect = 5e-43, Method: Composition-based stats.
Identities = 82/171 (47%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Query: 6 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 64
LV+ RHP+VE + G Y+PND Y E L+TGPNM GKSTY+R + ++ +AQ
Sbjct: 562 LVIQGGRHPVVEKVLGAQMYVPNDCYMNR-EREMLLITGPNMAGKSTYMRQVALTAVMAQ 620
Query: 65 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 124
IGCFVP + A + + DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+
Sbjct: 621 IGCFVPAERAVLPIFDQVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEI 680
Query: 125 GRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
GRGTST+DG +A +I + + TLF+TH+HE+ L R +P NVH
Sbjct: 681 GRGTSTYDGMALAQAIIEYIHDHIGAKTLFSTHYHELTALERSLPRLSNVH 731
>sp|C5D9H5|MUTS_GEOSW DNA mismatch repair protein MutS OS=Geobacillus sp. (strain WCH70)
GN=mutS PE=3 SV=1
Length = 860
Score = 173 bits (438), Expect = 6e-43, Method: Composition-based stats.
Identities = 81/171 (47%), Positives = 113/171 (66%), Gaps = 2/171 (1%)
Query: 6 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 64
L++ RHP+VE + G +Y+PND Y E L+TGPNM GKSTY+R I ++V +AQ
Sbjct: 569 LIIQAGRHPVVEKVLGAQTYVPNDCYMNK-ERELLLITGPNMSGKSTYMRQIALTVIMAQ 627
Query: 65 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 124
IGCFVP + A + + DQ+FTR+GAAD G STFM+EM E I T+NSL++ DE+
Sbjct: 628 IGCFVPAEKAVLPIFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEI 687
Query: 125 GRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
GRGTST+DG +A +I + + TLF+TH+HE+ L + + +NVH
Sbjct: 688 GRGTSTYDGMALAQAIIEYIHDHIGAKTLFSTHYHELTDLEQSLAKLKNVH 738
>sp|Q187T6|MUTS_CLOD6 DNA mismatch repair protein MutS OS=Clostridium difficile (strain
630) GN=mutS PE=3 SV=2
Length = 947
Score = 173 bits (438), Expect = 6e-43, Method: Composition-based stats.
Identities = 81/163 (49%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 12 RHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 70
RHP+VE + G +++PND Y GE N++TGPNM GKSTY+R + +A IG FVP
Sbjct: 588 RHPVVENIVGEENFVPNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVP 647
Query: 71 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 130
+SA I ++D+IFTRVGA+D +G STFM+EM E + ++K TE SLVI+DE+GRGTST
Sbjct: 648 AESADIPILDRIFTRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTST 707
Query: 131 FDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRN 173
+DG +A SI + N + TLFATH+HE+ L +N
Sbjct: 708 YDGISLAWSIVEYIQKNIRCKTLFATHYHELTDLEEEFKEVKN 750
>sp|Q1WT15|MUTS_LACS1 DNA mismatch repair protein MutS OS=Lactobacillus salivarius
(strain UCC118) GN=mutS PE=3 SV=1
Length = 876
Score = 172 bits (437), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/164 (49%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 13 HPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 71
HP+VE + G SYIPND+ ++ L+TGPNM GKSTY+R + ++V +AQIGCFVP
Sbjct: 579 HPVVEKVMGKQSYIPNDIKMDD-DLDVLLITGPNMSGKSTYMRQLALTVVIAQIGCFVPA 637
Query: 72 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 131
SA + + DQIFTR+GAAD G STFM+EMKET + T NSL++ DE+GRGT+T+
Sbjct: 638 KSAKMPIFDQIFTRIGAADDLISGESTFMVEMKETNVALMNATRNSLLLFDEIGRGTATY 697
Query: 132 DGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DG +A +I + +N TLF+TH+HE+ +L + +NVH
Sbjct: 698 DGMALAQAIIEYVHNNIHAKTLFSTHYHELTILDESLDKLQNVH 741
>sp|Q086A1|MUTS_SHEFN DNA mismatch repair protein MutS OS=Shewanella frigidimarina
(strain NCIMB 400) GN=mutS PE=3 SV=1
Length = 861
Score = 172 bits (436), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/164 (50%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 12 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 71
RHP+VE ++I N V + + +VTGPNMGGKSTY+R + + +A IGCFVP
Sbjct: 588 RHPVVERVSQAAFIANPVAL-TPQRQMLIVTGPNMGGKSTYMRQVALITLMAHIGCFVPA 646
Query: 72 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 131
D A I +D+IFTR+GA+D G STFM+EM ETA ++ T NSLV++DE+GRGTST+
Sbjct: 647 DHAQIGEIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATANSLVLMDEIGRGTSTY 706
Query: 132 DGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DG +A S A LA N TLFATH+ E+ L ++P+ NVH
Sbjct: 707 DGLALAWSAAEYLAKNVSALTLFATHYFELTQLPELLPSVINVH 750
>sp|Q21LB1|MUTS_SACD2 DNA mismatch repair protein MutS OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=mutS PE=3 SV=1
Length = 887
Score = 172 bits (436), Expect = 1e-42, Method: Composition-based stats.
Identities = 79/170 (46%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 6 LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 65
+ + Q RHP+VE ++PND+ + + ++TGPNMGGKSTY+R + V LAQI
Sbjct: 585 IFIEQGRHPVVEQVLDDPFVPNDLLLDTDQRML-IITGPNMGGKSTYMRQTALIVLLAQI 643
Query: 66 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 125
GC+VP + + +VD+IFTR+G++D G STFM+EM ETA ++ T NSLV++DE+G
Sbjct: 644 GCYVPASACKLGLVDRIFTRIGSSDDLAGGRSTFMVEMTETANILNNATRNSLVLMDEIG 703
Query: 126 RGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
RGTST+DG +A + LA+N FTLFATH+ E+ L + + +NVH
Sbjct: 704 RGTSTYDGLSLAWACVEHLANNLHAFTLFATHYFELTGLPKALAGVQNVH 753
>sp|Q8CPF0|MUTS_STAES DNA mismatch repair protein MutS OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=mutS PE=3 SV=1
Length = 873
Score = 172 bits (435), Expect = 2e-42, Method: Composition-based stats.
Identities = 82/178 (46%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Query: 6 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 64
L L RHP+VE + Y+PND + E L+TGPNM GKSTY+R + + +AQ
Sbjct: 564 LHLENSRHPVVERVMDYNDYVPNDCHLDD-ETFIYLITGPNMSGKSTYMRQVAIISIMAQ 622
Query: 65 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 124
+G +VPCDSAT+ + DQIFTR+GAAD G STFM+EM E + TENSL+I DE+
Sbjct: 623 MGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEI 682
Query: 125 GRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHESKYLYH 182
GRGTST+DG +A ++ +A TLF+TH+HE+ L +++ +NVH + Y
Sbjct: 683 GRGTSTYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAANEYQ 740
>sp|Q5HPP5|MUTS_STAEQ DNA mismatch repair protein MutS OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=mutS PE=3 SV=1
Length = 873
Score = 172 bits (435), Expect = 2e-42, Method: Composition-based stats.
Identities = 82/178 (46%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Query: 6 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 64
L L RHP+VE + Y+PND + E L+TGPNM GKSTY+R + + +AQ
Sbjct: 564 LHLENSRHPVVERVMDYNDYVPNDCHLDD-ETFIYLITGPNMSGKSTYMRQVAIISIMAQ 622
Query: 65 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 124
+G +VPCDSAT+ + DQIFTR+GAAD G STFM+EM E + TENSL+I DE+
Sbjct: 623 MGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEI 682
Query: 125 GRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHESKYLYH 182
GRGTST+DG +A ++ +A TLF+TH+HE+ L +++ +NVH + Y
Sbjct: 683 GRGTSTYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAANEYQ 740
>sp|C5BMR5|MUTS_TERTT DNA mismatch repair protein MutS OS=Teredinibacter turnerae (strain
ATCC 39867 / T7901) GN=mutS PE=3 SV=1
Length = 864
Score = 171 bits (434), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/184 (44%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
Query: 2 GTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
G + + + RHP+VE +IPND+ + + ++TGPNMGGKSTY+R + V
Sbjct: 581 GEAGIEIEKGRHPVVEQVLTDPFIPNDLTLNAQQRML-IITGPNMGGKSTYMRQTALIVL 639
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
LAQ+G +VP ++ + +VD+IFTR+G++D G STFM+EM ETA ++ T +SLV++
Sbjct: 640 LAQVGSYVPAEACRLGLVDRIFTRIGSSDDLAGGRSTFMVEMTETANILNNATSDSLVLM 699
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHESKYLY 181
DE+GRGTST+DG +A + LA + FTLFATH+ EI L +PT +NVH Y
Sbjct: 700 DEIGRGTSTYDGLSLAWACVEHLAEKLKSFTLFATHYFEITALPAQLPTVKNVHLDATEY 759
Query: 182 HTNV 185
N+
Sbjct: 760 QDNI 763
>sp|Q88UZ7|MUTS_LACPL DNA mismatch repair protein MutS OS=Lactobacillus plantarum (strain
ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=mutS PE=3 SV=1
Length = 896
Score = 171 bits (433), Expect = 3e-42, Method: Composition-based stats.
Identities = 80/165 (48%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Query: 12 RHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 70
RHP+VE + G SY+PN+V E L+TGPNM GKSTY+R + ++V +AQIGCFVP
Sbjct: 576 RHPVVEKVMGNQSYVPNNVTMSPDETVL-LITGPNMSGKSTYMRQLALTVIMAQIGCFVP 634
Query: 71 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 130
SA + + DQIFTR+GA D G STFM+EM+E ++ T NSLV+ DE+GRGT+T
Sbjct: 635 AKSAQLPIFDQIFTRIGATDDLISGQSTFMVEMQEANNALQHATANSLVLFDEIGRGTAT 694
Query: 131 FDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
+DG +A +I + ++ TLF+TH+HE+ L + + RNVH
Sbjct: 695 YDGMALAQAIIEFVHNHIHAKTLFSTHYHELTALDQELSGLRNVH 739
>sp|Q47WN0|MUTS_COLP3 DNA mismatch repair protein MutS OS=Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) GN=mutS PE=3 SV=1
Length = 872
Score = 171 bits (433), Expect = 3e-42, Method: Composition-based stats.
Identities = 84/174 (48%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 12 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 71
RH +VE ++I N V + + ++TGPNMGGKSTY+R + V LA IGC+VP
Sbjct: 602 RHVVVEQMTNDAFIANPVLL-TEQRKMLIITGPNMGGKSTYMRQTALIVLLAHIGCYVPA 660
Query: 72 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 131
D+ATI +VD+IFTR+GA+D G STFM+EM ETA ++ T+ SLV++DE+GRGTST+
Sbjct: 661 DNATIGLVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATDKSLVLLDEIGRGTSTY 720
Query: 132 DGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHESKYLYHTNV 185
DG +A + A LA + FTLFATH+ E+ LL+ I T NVH + N+
Sbjct: 721 DGLSLAWACAEMLALKTKAFTLFATHYFELTLLAGQISTLANVHLDAMEHDDNI 774
>sp|P61669|MUTS_LEPIC DNA mismatch repair protein MutS OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar copenhageni
(strain Fiocruz L1-130) GN=mutS PE=3 SV=1
Length = 848
Score = 171 bits (432), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/166 (50%), Positives = 117/166 (70%), Gaps = 3/166 (1%)
Query: 5 TLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 62
+L LN RHP+VE L G +IPN VY + + + ++TGPNM GKST++R I ++ L
Sbjct: 565 SLDLNDSRHPVVEATLPPGQEFIPNSVYLDTQDKAIAVLTGPNMAGKSTFMRQIALNQIL 624
Query: 63 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 122
QIG FVP SA + +VD++FTR+GA D+ G STF +EMKETA ++ TE+SL++ D
Sbjct: 625 FQIGAFVPAKSAKLPIVDKLFTRIGAGDNLTAGESTFFVEMKETANILNHYTEDSLILFD 684
Query: 123 ELGRGTSTFDGFGMACSIARELAS-NRQPFTLFATHFHEIALLSRV 167
E+GRGTST+DG +A SI L+S + +P T+FATH+HE+ LSR+
Sbjct: 685 EVGRGTSTYDGMSIAWSILEYLSSLSVRPKTIFATHYHELTELSRL 730
>sp|B8CX98|MUTS_HALOH DNA mismatch repair protein MutS OS=Halothermothrix orenii (strain
H 168 / OCM 544 / DSM 9562) GN=mutS PE=3 SV=1
Length = 896
Score = 170 bits (431), Expect = 4e-42, Method: Composition-based stats.
Identities = 79/163 (48%), Positives = 112/163 (68%), Gaps = 2/163 (1%)
Query: 4 GTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 63
G + + + RHP+VE G +++PND Y E F ++TGPNM GKSTY+R + + V +A
Sbjct: 579 GVIEIIKGRHPVVEDMGKGAFVPNDTYLDLEEERFIIITGPNMSGKSTYMRQVALIVLMA 638
Query: 64 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 123
Q+G FVP D ATI +VD+IFTRVGA+D G STFM+EM E A ++ T NSL+I+DE
Sbjct: 639 QMGSFVPADKATIGIVDRIFTRVGASDDLTTGQSTFMVEMNEVANIVNNATRNSLIILDE 698
Query: 124 LGRGTSTFDGFGMACSIARELASNRQ--PFTLFATHFHEIALL 164
+GRGTST+DG +A +++ + + + TLFATH+HE+ L
Sbjct: 699 VGRGTSTYDGLSIAWAVSEYINNPDRIGARTLFATHYHELTQL 741
>sp|Q5UZG9|MUTS1_HALMA DNA mismatch repair protein MutS 1 OS=Haloarcula marismortui
(strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
GN=mutS1 PE=3 SV=2
Length = 921
Score = 170 bits (431), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/170 (48%), Positives = 112/170 (65%), Gaps = 3/170 (1%)
Query: 6 LVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQI 65
L + RHP+VE ++PND+Y + F +VTGPNM GKSTY+R + LAQ+
Sbjct: 585 LSIEAGRHPVVEQT--TEFVPNDLYMDD-DRQFLIVTGPNMSGKSTYMRQAALITLLAQV 641
Query: 66 GCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELG 125
G FVP SAT+ +VD IFTRVGA D +G STFM+EM+E + ++ TE SLVI+DE+G
Sbjct: 642 GSFVPARSATVGLVDGIFTRVGALDELAQGRSTFMVEMQELSNILHSATEESLVILDEVG 701
Query: 126 RGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
RGT+TFDG +A + + ++ Q TLFATH+HE+ L +PT NVH
Sbjct: 702 RGTATFDGISIAWAATEYIVNSIQSKTLFATHYHELTALGEELPTVENVH 751
>sp|Q12PY3|MUTS_SHEDO DNA mismatch repair protein MutS OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=mutS PE=3
SV=1
Length = 862
Score = 170 bits (431), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/168 (49%), Positives = 109/168 (64%), Gaps = 1/168 (0%)
Query: 8 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 67
+N RHP+VE ++I N V + +VTGPNMGGKSTY+R + + +A IGC
Sbjct: 584 INAGRHPVVERVSSTAFIANPVNLDAKRHML-IVTGPNMGGKSTYMRQVALISLMAHIGC 642
Query: 68 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 127
FVP DSA I +D+IFTR+GA+D G STFM+EM ETA ++ T SLV++DE+GRG
Sbjct: 643 FVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATSQSLVLMDEIGRG 702
Query: 128 TSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
TST+DG +A S A LA + TLFATH+ E+ L +IP NVH
Sbjct: 703 TSTYDGLSLAWSAAEYLALQIKAMTLFATHYFELTQLPDLIPGANNVH 750
>sp|Q82ZA2|MUTS_ENTFA DNA mismatch repair protein MutS OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=mutS PE=3 SV=1
Length = 858
Score = 170 bits (431), Expect = 5e-42, Method: Composition-based stats.
Identities = 80/174 (45%), Positives = 113/174 (64%), Gaps = 2/174 (1%)
Query: 3 TGTLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
T L + + RHP+VE + G YIPN + E L+TGPNM GKSTY+R + ++V
Sbjct: 569 TKNLAIVEGRHPVVEKVLGHQEYIPNSIRMNP-ETDILLITGPNMSGKSTYMRQLALTVV 627
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
+AQIGCFVP +SA + + DQIFTR+GA+D G STFM+EM E ++ T NSL++
Sbjct: 628 MAQIGCFVPAESAEMPIFDQIFTRIGASDDLIAGQSTFMVEMMEANQALRHATPNSLILF 687
Query: 122 DELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DELGRGT+T+DG +A +I + Q TLF+TH+HE+ +L + +N+H
Sbjct: 688 DELGRGTATYDGMALAQAIIEYIHREVQAKTLFSTHYHELTVLDETLKGLKNIH 741
>sp|Q045Q5|MUTS_LACGA DNA mismatch repair protein MutS OS=Lactobacillus gasseri (strain
ATCC 33323 / DSM 20243) GN=mutS PE=3 SV=1
Length = 857
Score = 170 bits (430), Expect = 5e-42, Method: Composition-based stats.
Identities = 82/165 (49%), Positives = 109/165 (66%), Gaps = 2/165 (1%)
Query: 12 RHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 70
RHP+VE + SYIPNDV F L+TGPNM GKSTY+R + + +AQIGCFVP
Sbjct: 577 RHPVVEQVMTAGSYIPNDVKMDQDTDIF-LITGPNMSGKSTYMRQMALIAIMAQIGCFVP 635
Query: 71 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 130
DSAT+ + DQIFTR+GAAD G STFM+EM E ++ T+ SLV+ DE+GRGT+T
Sbjct: 636 ADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTAT 695
Query: 131 FDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
+DG +A +I + L TLFATH+HE+ L + + +N+H
Sbjct: 696 YDGMALAGAIVKYLHDKVGAKTLFATHYHELTDLDQTLKHLKNIH 740
>sp|Q03R33|MUTS_LACBA DNA mismatch repair protein MutS OS=Lactobacillus brevis (strain
ATCC 367 / JCM 1170) GN=mutS PE=3 SV=1
Length = 892
Score = 170 bits (430), Expect = 6e-42, Method: Composition-based stats.
Identities = 79/171 (46%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 6 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 64
L + Q RHP+VE + G SY+PNDV + + L+TGPNM GKSTY+R + ++V +AQ
Sbjct: 570 LKITQGRHPVVEKVLGRQSYVPNDVTMDD-QTNILLITGPNMSGKSTYMRQLALTVIMAQ 628
Query: 65 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 124
+GCFVP ++A + + DQIFTR+GAAD G STFM+EM+E + T NSL++ DE+
Sbjct: 629 MGCFVPAEAAEMPIFDQIFTRIGAADDLISGQSTFMVEMQEANRALSHATANSLILFDEI 688
Query: 125 GRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
GRGT+T+DG +A +I + + TLF+TH+HE+ L + +NVH
Sbjct: 689 GRGTATYDGMALAQAIIEYVHNRVHAKTLFSTHYHELTALDESLKQLKNVH 739
>sp|A1T004|MUTS_PSYIN DNA mismatch repair protein MutS OS=Psychromonas ingrahamii (strain
37) GN=mutS PE=3 SV=1
Length = 856
Score = 169 bits (429), Expect = 7e-42, Method: Composition-based stats.
Identities = 81/168 (48%), Positives = 108/168 (64%), Gaps = 1/168 (0%)
Query: 8 LNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGC 67
+ + RHP+VE +I N V ++TGPNMGGKSTY+R + + V +A IG
Sbjct: 583 IEEGRHPVVEQVSKTPFIANPVMLNDKRRML-IITGPNMGGKSTYMRQVALMVLMAHIGS 641
Query: 68 FVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRG 127
F+P A I VD+IFTR+GA+D G STFM+EM ETA ++ T+NSLV++DE+GRG
Sbjct: 642 FIPAQQAKIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRG 701
Query: 128 TSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
TSTFDG +A + A +LA Q +TLFATH+ E+ L IP NVH
Sbjct: 702 TSTFDGLSLAWACAEQLAKKIQAYTLFATHYFELTKLPENIPELVNVH 749
>sp|Q97I19|MUTS_CLOAB DNA mismatch repair protein MutS OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=mutS PE=3 SV=1
Length = 869
Score = 169 bits (428), Expect = 9e-42, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 4 GTLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 62
GTLV+ + RHP+VE + +++ ND + + L+TGPNM GKSTY+R +G+ V +
Sbjct: 574 GTLVIKEGRHPVVEKVIASGNFVANDTVINNSDNVMMLITGPNMAGKSTYMRQVGLIVLM 633
Query: 63 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 122
AQIGCFVP +A IS+ D+IFTR+GA+D G STFM+EM E + ++K T+NSL+++D
Sbjct: 634 AQIGCFVPASAAEISICDKIFTRIGASDDLNAGKSTFMVEMWEVSHILKNATKNSLILLD 693
Query: 123 ELGRGTSTFDGFGMACSIAREL--ASNRQPFTLFATHFHEIALLSRVIPTFRN 173
E+GRGTST+DG +A S+ + + N + TLFATH+HE+ L I +N
Sbjct: 694 EVGRGTSTYDGLSIAWSVIEYICKSENLKCKTLFATHYHELTKLEGEIEGLKN 746
>sp|Q39VR6|MUTS_GEOMG DNA mismatch repair protein MutS OS=Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210) GN=mutS PE=3 SV=1
Length = 872
Score = 169 bits (428), Expect = 1e-41, Method: Composition-based stats.
Identities = 82/164 (50%), Positives = 114/164 (69%), Gaps = 3/164 (1%)
Query: 5 TLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 63
TL +++ RHP+VE L ++PNDV +GE ++TGPNM GKST++R + + V +A
Sbjct: 583 TLSISEGRHPVVEALNVSERFVPNDVLLDNGENQLVIITGPNMAGKSTFMRQVALIVLMA 642
Query: 64 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 123
Q+G FVP A I VVD+IFTRVGA+D+ RG STFM+EM ETA +++ T SLV++DE
Sbjct: 643 QLGSFVPATEARIGVVDRIFTRVGASDNLARGQSTFMVEMMETAAILRNATPKSLVVLDE 702
Query: 124 LGRGTSTFDGFGMACSIARELASNRQ--PFTLFATHFHEIALLS 165
+GRGTSTFDG +A ++A L + TLFATH+HE+ L+
Sbjct: 703 IGRGTSTFDGVSIAWAVAEYLHDTARCAAKTLFATHYHELTELA 746
>sp|A5G447|MUTS_GEOUR DNA mismatch repair protein MutS OS=Geobacter uraniireducens
(strain Rf4) GN=mutS PE=3 SV=1
Length = 872
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Query: 5 TLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 63
TL +++ RHP++E + G ++PND +GE ++TGPNM GKST++R + + +A
Sbjct: 583 TLFISEGRHPVIEAMHQGERFVPNDTLLDNGENQLIIITGPNMAGKSTFMRQVALITLMA 642
Query: 64 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 123
Q+G FVP A IS+VD+IFTRVGA+D+ RG STFM+EM E+A +++ T SLVI+DE
Sbjct: 643 QMGSFVPATEAHISLVDRIFTRVGASDNLARGQSTFMVEMMESANILRHATPKSLVILDE 702
Query: 124 LGRGTSTFDGFGMACSIARELASNRQ--PFTLFATHFHEIALLSRVIPTFRN 173
+GRGTSTFDG +A ++A L N + TLFATH+HE+ L+ +N
Sbjct: 703 IGRGTSTFDGVSIAWAVAEFLHDNDKHAAKTLFATHYHELTELAVTRKRIKN 754
>sp|C6DZZ3|MUTS_GEOSM DNA mismatch repair protein MutS OS=Geobacter sp. (strain M21)
GN=mutS PE=3 SV=1
Length = 869
Score = 169 bits (427), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/171 (46%), Positives = 115/171 (67%), Gaps = 3/171 (1%)
Query: 6 LVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQ 64
L + + RHP++E + ++PND +GE ++TGPNM GKST++R + + +AQ
Sbjct: 583 LSITEGRHPVIEDMHSAERFVPNDTLLDNGENQLIIITGPNMAGKSTFMRQVALISLMAQ 642
Query: 65 IGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDEL 124
+G FVP D A I +VD+IFTRVGA+D+ RG STFM+EM E+A +++ T SLVI+DE+
Sbjct: 643 MGSFVPADKALIPLVDRIFTRVGASDNLARGHSTFMVEMMESAAILRGATARSLVILDEI 702
Query: 125 GRGTSTFDGFGMACSIARELASNR--QPFTLFATHFHEIALLSRVIPTFRN 173
GRGTSTFDG +A ++A L N+ TLFATH+HE+ L+ P +N
Sbjct: 703 GRGTSTFDGVSIAWAVAEFLHDNKIHAAKTLFATHYHELTELAVTRPGIKN 753
>sp|Q7NRW7|MUTS_CHRVO DNA mismatch repair protein MutS OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=mutS PE=3 SV=1
Length = 873
Score = 169 bits (427), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/166 (50%), Positives = 110/166 (66%), Gaps = 2/166 (1%)
Query: 12 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 71
RHP+VE + +I ND S E L+TGPNMGGKSTY+R + LA +G FVP
Sbjct: 606 RHPVVEAEVE-RFIANDTRL-SAERKLLLITGPNMGGKSTYMRQNALITLLAHVGSFVPA 663
Query: 72 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 131
DSA I +D+IFTR+GA+D G STFM+EM ETA ++ +E+SLV++DE+GRGTSTF
Sbjct: 664 DSAVIGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILNNASEHSLVLMDEVGRGTSTF 723
Query: 132 DGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHES 177
DG +A +IAR L + +TLFATH+ E+ L+ P NVH S
Sbjct: 724 DGLALAWAIARALIEKNRAYTLFATHYFELTTLAGEYPAVANVHLS 769
>sp|Q8F496|MUTS_LEPIN DNA mismatch repair protein MutS OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
GN=mutS PE=3 SV=1
Length = 848
Score = 168 bits (426), Expect = 2e-41, Method: Composition-based stats.
Identities = 82/166 (49%), Positives = 117/166 (70%), Gaps = 3/166 (1%)
Query: 5 TLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFL 62
+L L+ RHP+VE L G +IPN VY + + + ++TGPNM GKST++R I ++ L
Sbjct: 565 SLDLSDSRHPVVEATLPPGQEFIPNSVYLDTQDKAIAVLTGPNMAGKSTFMRQIALNQIL 624
Query: 63 AQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIID 122
QIG FVP SA + +VD++FTR+GA D+ G STF +EMKETA ++ TE+SL++ D
Sbjct: 625 FQIGAFVPAKSAKLPIVDKLFTRIGAGDNLTAGESTFFVEMKETANILNHYTEDSLILFD 684
Query: 123 ELGRGTSTFDGFGMACSIARELAS-NRQPFTLFATHFHEIALLSRV 167
E+GRGTST+DG +A SI L+S + +P T+FATH+HE+ LSR+
Sbjct: 685 EVGRGTSTYDGMSIAWSILEYLSSLSVRPKTIFATHYHELTELSRL 730
>sp|Q1IN52|MUTS_KORVE DNA mismatch repair protein MutS OS=Koribacter versatilis (strain
Ellin345) GN=mutS PE=3 SV=1
Length = 882
Score = 168 bits (426), Expect = 2e-41, Method: Composition-based stats.
Identities = 79/179 (44%), Positives = 118/179 (65%), Gaps = 4/179 (2%)
Query: 3 TGTLVLNQCRHPIVELQ----GGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGV 58
+G L + RHP++EL ++PND+Y + + ++TGPNMGGKSTY+R +
Sbjct: 594 SGEFELIEARHPVIELPELTGSADRFVPNDLYLNATTHTVIVLTGPNMGGKSTYLRQAAL 653
Query: 59 SVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSL 118
+AQ+G FVP SA +SVVD++FTR+GAAD+ RG STFM+EM ETA ++ T+ SL
Sbjct: 654 VAVMAQMGSFVPARSARLSVVDRVFTRIGAADNLARGRSTFMVEMTETAAILNTATDRSL 713
Query: 119 VIIDELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHES 177
+++DE+GRGTST+DG +A + L + + LFATH+HE+ +L+ + +N H S
Sbjct: 714 ILLDEVGRGTSTYDGLAIAWACIEFLHARTRAKALFATHYHELTVLADELSGVKNYHVS 772
>sp|Q6MBV4|MUTS_PARUW DNA mismatch repair protein MutS OS=Protochlamydia amoebophila
(strain UWE25) GN=mutS PE=3 SV=1
Length = 858
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 114/182 (62%), Gaps = 7/182 (3%)
Query: 3 TGTLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVF 61
+ LV+ + RHP++E + +IPND Y L+TGPNM GKSTY+R + + V
Sbjct: 596 SSILVIEEGRHPVIETVCRHEKFIPNDTYLDDQANRLLLITGPNMAGKSTYLRQVALIVI 655
Query: 62 LAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVII 121
LAQIG FVP A I ++D++FTR+GA+D RG STFM+EM ETA ++ T SLVI+
Sbjct: 656 LAQIGSFVPAAKAHIGIIDKVFTRIGASDDLSRGQSTFMVEMTETANILNNATSQSLVIL 715
Query: 122 DELGRGTSTFDGFGMACSIAREL--ASNRQPFTLFATHFHEIALLSRVIPTFRN----VH 175
DE+GRGTST+DG +A S+A L R TLFATH+ E+ L +P N VH
Sbjct: 716 DEIGRGTSTYDGISIAWSVAEYLLTTEKRMAKTLFATHYWELTKLEEKVPGAVNYNVAVH 775
Query: 176 ES 177
E+
Sbjct: 776 EA 777
>sp|B8CJQ5|MUTS_SHEPW DNA mismatch repair protein MutS OS=Shewanella piezotolerans
(strain WP3 / JCM 13877) GN=mutS PE=3 SV=1
Length = 860
Score = 168 bits (426), Expect = 2e-41, Method: Composition-based stats.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Query: 12 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 71
RHP+VE +I N V S + +VTGPNMGGKSTY+R I + +A IGC+VP
Sbjct: 588 RHPVVEQVSQSPFIANPVTLNS-QRKMLIVTGPNMGGKSTYMRQIALITLMAHIGCYVPA 646
Query: 72 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 131
+ A I VD+IFTR+GA+D G STFM+EM ETA ++ T NSLV++DE+GRGTST+
Sbjct: 647 EHAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEIGRGTSTY 706
Query: 132 DGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DG +A S A LA+N TLFATH+ E+ L I NVH
Sbjct: 707 DGLSLAWSAAEYLANNLNAMTLFATHYFELTQLPEQIKNVENVH 750
>sp|Q9KAC0|MUTS_BACHD DNA mismatch repair protein MutS OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=mutS PE=3 SV=1
Length = 865
Score = 168 bits (425), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 4/168 (2%)
Query: 12 RHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 69
RHP+VE + G Y+ NDV K G S L+TGPNM GKSTY+R + + + QIGCFV
Sbjct: 574 RHPVVERVIPNG-EYVANDVDMKDGR-SILLITGPNMAGKSTYMRQLALIAIMGQIGCFV 631
Query: 70 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 129
P D A + + DQ+FTR+GAAD G STFM+EM ET ++K T+NSL+++DE+GRGTS
Sbjct: 632 PADEARLPIFDQVFTRIGAADDLASGQSTFMVEMLETKYALQKATQNSLILLDEIGRGTS 691
Query: 130 TFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHES 177
T+DG +A +I + + TLF+TH+HE+ L + + +NVH S
Sbjct: 692 TYDGMALAQAIIEYIHDEIRAKTLFSTHYHELTALEKELSDVKNVHVS 739
>sp|Q4L5Z9|MUTS_STAHJ DNA mismatch repair protein MutS OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=mutS PE=3 SV=1
Length = 883
Score = 168 bits (425), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/172 (45%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 5 TLVLNQCRHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLA 63
TL L RHP+VE + Y+PND + L+TGPNM GKSTY+R + + +A
Sbjct: 564 TLSLENSRHPVVERVMDYNDYVPNDCKLDKDNFIY-LITGPNMSGKSTYMRQVAIISIMA 622
Query: 64 QIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDE 123
Q+G +VPC+ A + + DQIFTR+GAAD G STFM+EM E + TE+SL+I DE
Sbjct: 623 QMGAYVPCNKAELPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDE 682
Query: 124 LGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
+GRGTST+DG +A ++ +A TLF+TH+HE+ L + +P+ +NVH
Sbjct: 683 IGRGTSTYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTTLDQELPSLKNVH 734
>sp|Q67NK1|MUTS_SYMTH DNA mismatch repair protein MutS OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=mutS PE=3 SV=1
Length = 875
Score = 167 bits (424), Expect = 3e-41, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 116/174 (66%), Gaps = 3/174 (1%)
Query: 2 GTGTLVLNQCRHPIVE--LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVS 59
G+ L L RHP++E ++ G +++PND+ +GE L+TGPNMGGKST +R ++
Sbjct: 583 GSTVLELKGSRHPVLERVMEEG-AFVPNDLLVDTGENRVLLITGPNMGGKSTVMRQAALA 641
Query: 60 VFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLV 119
V LAQ G FVP +SA I +VD++FTRVGA+D G STFM+EM E A ++ TE SLV
Sbjct: 642 VILAQAGSFVPAESAHIGLVDRVFTRVGASDDLATGRSTFMVEMTEVANILHSATERSLV 701
Query: 120 IIDELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRN 173
++DE+GRGT+TFDG +A +I + TLFATH+HE+ L ++P +N
Sbjct: 702 VLDEVGRGTATFDGLSIAWAITEHIHQAIGCRTLFATHYHELCELEGILPGVKN 755
>sp|B0TK13|MUTS_SHEHH DNA mismatch repair protein MutS OS=Shewanella halifaxensis (strain
HAW-EB4) GN=mutS PE=3 SV=1
Length = 859
Score = 167 bits (424), Expect = 3e-41, Method: Composition-based stats.
Identities = 81/164 (49%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Query: 12 RHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPC 71
RHP+VE +I N V + E +VTGPNMGGKSTY+R + + +A IGC+VP
Sbjct: 588 RHPVVEQVSQSPFIANPVTLNN-ERKMLIVTGPNMGGKSTYMRQVALITLMAHIGCYVPA 646
Query: 72 DSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTF 131
+ A I VD+IFTR+GA+D G STFM+EM ETA ++ T NSLV++DE+GRGTST+
Sbjct: 647 EHAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEIGRGTSTY 706
Query: 132 DGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
DG +A S A LA + Q TLFATH+ E+ L ++ NVH
Sbjct: 707 DGLSLAWSAAEYLAKHLQAMTLFATHYFELTQLPELLSNVENVH 750
>sp|A6GWN3|MUTS_FLAPJ DNA mismatch repair protein MutS OS=Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511) GN=mutS PE=3 SV=1
Length = 866
Score = 167 bits (424), Expect = 3e-41, Method: Composition-based stats.
Identities = 82/169 (48%), Positives = 114/169 (67%), Gaps = 3/169 (1%)
Query: 12 RHPIVELQG--GVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFV 69
RHP++E Q GV YI NDVY ++TGPNM GKS +R + V LAQ+G FV
Sbjct: 585 RHPVIEKQLPIGVPYIANDVYLDRDTQQLIMITGPNMSGKSAILRQTALIVLLAQMGSFV 644
Query: 70 PCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTS 129
P +S + +VD+IFTRVGA+D+ G STFM+EM ETA+++ ++ SLV++DE+GRGTS
Sbjct: 645 PAESVQMGIVDKIFTRVGASDNISMGESTFMVEMNETASILNNISDRSLVLLDEIGRGTS 704
Query: 130 TFDGFGMACSIARELASN-RQPFTLFATHFHEIALLSRVIPTFRNVHES 177
T+DG +A +IA L N QP TLFATH+HE+ ++ +P +N + S
Sbjct: 705 TYDGVSIAWAIAEFLHENPAQPKTLFATHYHELNEMTESLPRIQNYNVS 753
>sp|Q38YR4|MUTS_LACSS DNA mismatch repair protein MutS OS=Lactobacillus sakei subsp.
sakei (strain 23K) GN=mutS PE=3 SV=1
Length = 867
Score = 167 bits (423), Expect = 3e-41, Method: Composition-based stats.
Identities = 81/165 (49%), Positives = 107/165 (64%), Gaps = 2/165 (1%)
Query: 12 RHPIVE-LQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVP 70
RHP+VE + G YIPN V E L+TGPNM GKSTY+R + ++V +AQ+GCFVP
Sbjct: 578 RHPVVEKVLGRQKYIPNAVQMGK-ETDMLLITGPNMSGKSTYMRQLALTVIMAQMGCFVP 636
Query: 71 CDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTST 130
SA + V DQIFTR+GAAD G STFM+EM E I T NSL++ DE+GRGT+T
Sbjct: 637 AKSANLPVFDQIFTRIGAADDLISGQSTFMVEMMEANRAIMSATANSLILFDEIGRGTAT 696
Query: 131 FDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVH 175
+DG +A +I + + TLF+TH+HE+ L+ + RNVH
Sbjct: 697 YDGMALAQAIIEYIHDHVHAKTLFSTHYHELTALADTLTALRNVH 741
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,403,498
Number of Sequences: 539616
Number of extensions: 2405659
Number of successful extensions: 7286
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 6041
Number of HSP's gapped (non-prelim): 834
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)