BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5298
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0VCA7|OXSM_BOVIN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos
taurus GN=OXSM PE=2 SV=1
Length = 460
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARI-EGLDLTAQ 60
+RVV+TG+G+V+P+G Q W+ + G++ + L EY +PC +AA + G D Q
Sbjct: 43 RRVVITGIGLVTPLGVGTQLVWDRLVRGESGIVSLVGDEYQSIPCSVAAYVPRGCD-EGQ 101
Query: 61 FTQ------SKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGMI 109
F + S ++MS T ++ A AL DA W+PQ+E + TGVA+G GM+
Sbjct: 102 FNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMV 156
>sp|Q9NWU1|OXSM_HUMAN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo
sapiens GN=OXSM PE=1 SV=1
Length = 459
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TG+G+V+P+G W+ + G++ + L EY +PC +AA + QF
Sbjct: 42 RRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQF 101
Query: 62 ------TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGMI 109
++S +++MS T ++ A A+ D+ W+PQ+E + TGVA+G GMI
Sbjct: 102 NEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMI 155
>sp|Q9D404|OXSM_MOUSE 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus
musculus GN=Oxsm PE=2 SV=1
Length = 459
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TG+G+V+P+G Q W+ + G++ + + EY +PC +AA + QF
Sbjct: 42 RRVVITGIGLVTPLGVGTQLVWDRLLRGESGIVSVVGDEYKNIPCSVAAYVPRGPHEGQF 101
Query: 62 ------TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGMI 109
++S ++MS +T ++ A AL D+ W+P+ E + TGVA+G GM+
Sbjct: 102 NEENFVSKSDAKSMSSSTIMAVGAAELALKDSGWHPKREADQVATGVAIGMGMV 155
>sp|O94297|OXSM_SCHPO Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC887.13c PE=3 SV=1
Length = 426
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSE-PEYSKLPCKIAARI------E 53
MKRVV+TGLG V+P+G ++ W + +GK+ + L PEY ++P K+A I E
Sbjct: 1 MKRVVITGLGAVTPLGNGVKTNWRNLIQGKSGIVSLKGFPEYEQIPSKVAGVIPRGKEKE 60
Query: 54 GLDLTAQFTQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
++ Q KLR ++ T +L + EAL DA+W +E++K TGV GTG+
Sbjct: 61 EWNVLDYVDQGKLREVATFTQLALTSAAEALKDARWIDIDEQEKLATGVCFGTGI 115
>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1
Length = 416
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVVVTGLG ++P+G T Q W + EG+ + P++ + S C+ ++ D T
Sbjct: 7 KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFL 66
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + + M R F++ A+++A+ DAK NE + GV +GTG+
Sbjct: 67 DRKEAKRMDRFCHFAVCASQQAINDAKL-VINELNADEIGVLIGTGI 112
>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis
(strain 168) GN=fabF PE=3 SV=1
Length = 413
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVVVTGLG +SP+G ++WN G + + P++ + + P K+AA ++ ++
Sbjct: 4 KRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDYM 63
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + R M R T ++++A + A+ DA N +E R GV VG+G+
Sbjct: 64 DKKEARKMDRFTQYAVVAAKMAVEDADLNITDEIAP-RVGVWVGSGI 109
>sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1
Length = 414
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TGLG+VSP+G W A+ GK+ V P++ + S P +IAA + D
Sbjct: 4 RRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPALVL 63
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+R F++ + R+A D+ NE R GVA+G+G+
Sbjct: 64 DLKSIRKTDVFVQFAMESARQAWEDSGLE-INETNAPRVGVAIGSGI 109
>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fabF PE=3 SV=3
Length = 414
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVVVTG+G++SPVG T +S+W A+ G++ + + + + + A ++G D
Sbjct: 4 RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQYM 63
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
++ R M + + A +AL D+ NE+ R GVA+G+G+
Sbjct: 64 SKKDARKMDLFIQYGIAAGIQALEDSGLE-VNEENAARIGVAIGSGI 109
>sp|P0A953|FABB_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
(strain K12) GN=fabB PE=1 SV=1
Length = 406
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQ 60
MKR V+TGLGIVS +G +Q +++EG++ ++ E + S + + ++ LD T
Sbjct: 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGL 59
Query: 61 FTQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107
+ +R MS A+ ++ ++ +A+ADA +P+ + R G+ G+G
Sbjct: 60 IDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSG 106
>sp|P0A954|FABB_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabB PE=3
SV=1
Length = 406
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQ 60
MKR V+TGLGIVS +G +Q +++EG++ ++ E + S + + ++ LD T
Sbjct: 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGL 59
Query: 61 FTQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107
+ +R MS A+ ++ ++ +A+ADA +P+ + R G+ G+G
Sbjct: 60 IDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSG 106
>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi
GN=fabF PE=3 SV=2
Length = 415
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVVVTG+G++SPVG T +S+W A+ EG++ + + + + + A ++ D T
Sbjct: 4 RRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCTEYM 63
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
++ R M + + A +AL D+ E+ R GVA+G+G+
Sbjct: 64 SKKDARKMDLFIQYGIAAGIQALDDSGLE-ITEENAARVGVAIGSGI 109
>sp|P23156|KAS2_STRCO Putative polyketide beta-ketoacyl synthase 2 OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)
GN=SCO5317 PE=3 SV=1
Length = 424
Score = 65.5 bits (158), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+R VVTGLG++SP GT ++ W A+ +G + + P++ + LP ++A + G D
Sbjct: 14 RRAVVTGLGVLSPHGTGVEAHWKAVADGTSSLGPVTREGCAHLPLRVAGEVHGFDAAETV 73
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107
L R T F+L AT+ ALADA++ + GV G
Sbjct: 74 EDRFLVQTDRFTHFALSATQHALADARFGRADVDSPYSVGVVTAAG 119
>sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MW2) GN=fabF PE=1 SV=1
Length = 414
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVV+TG+G +SP+G ++ W +G + ++ + +A ++ ++
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + R M R T ++++A REA+ DA+ + NE +R GV +G+G+
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQLDI-NENTADRIGVWIGSGI 110
>sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MSSA476) GN=fabF PE=3 SV=1
Length = 414
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVV+TG+G +SP+G ++ W +G + ++ + +A ++ ++
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + R M R T ++++A REA+ DA+ + NE +R GV +G+G+
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQLDI-NENTADRIGVWIGSGI 110
>sp|Q5HHA1|FABF_STAAC 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain COL) GN=fabF PE=1 SV=1
Length = 414
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVV+TG+G +SP+G ++ W +G + ++ + +A ++ ++
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + R M R T ++++A REA+ DA+ + NE +R GV +G+G+
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQLDI-NENTADRIGVWIGSGI 110
>sp|P16540|KAS1_STRVN Granaticin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces violaceoruber GN=gra-orf1 PE=3 SV=1
Length = 421
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TG+G+ +P G+ + W+ + G+ P+S + S +IA I+ + F
Sbjct: 3 RRVVITGVGVRAPGGSGTKEFWDLLTAGRTATRPISFFDASPFRSRIAGEIDFDAVAEGF 62
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ ++R M RAT F++ TR+ALAD+ + R GVA+G+ +
Sbjct: 63 SPREVRRMDRATQFAVACTRDALADSGLD-TGALDPSRIGVALGSAV 108
>sp|Q7A6F8|FABF_STAAN 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain N315) GN=fabF PE=1 SV=1
Length = 414
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVV+TG+G +SP+G ++ W +G + ++ + +A ++ ++
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + R M R T ++++A REA+ DA+ + N+ +R GV +G+G+
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQLDI-NDNTADRIGVWIGSGI 110
>sp|Q99VA6|FABF_STAAM 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1
Length = 414
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVV+TG+G +SP+G ++ W +G + ++ + +A ++ ++
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + R M R T ++++A REA+ DA+ + N+ +R GV +G+G+
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQLDI-NDNTADRIGVWIGSGI 110
>sp|Q6GIA3|FABF_STAAR 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MRSA252) GN=fabF PE=3 SV=1
Length = 414
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 3 RVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFT 62
RVV+TG+G +SP+G ++ W +G + ++ + +A ++ ++
Sbjct: 6 RVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHID 65
Query: 63 QSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + R M R T ++++A REA+ DA+ + NE +R GV +G+G+
Sbjct: 66 KKEARRMDRFTQYAIVAAREAVKDAQLDI-NENTADRIGVWIGSGI 110
>sp|P43678|KAS1_STRRM Oxytetracycline polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces rimosus PE=3 SV=2
Length = 425
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TG+G+V+P + W + G+ P+S + S ++AA +
Sbjct: 8 RRVVITGIGVVAPGDVGTKPFWEMLTAGRTATRPISSFDASPFRSQVAAECDFDPAAEGL 67
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107
+Q ++R R F+ +A REALAD+ E RTGV GT
Sbjct: 68 SQRQVRAWDRTMQFAYVAAREALADS--GVTGEADPLRTGVMAGTA 111
>sp|Q89AY4|FABB_BUCBP 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=fabB PE=3 SV=1
Length = 407
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 56/106 (52%)
Query: 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQ 60
MKRVV+TGLGI+S +G + ++ E K+ +S E E S + + I+ +
Sbjct: 1 MKRVVITGLGIISSIGNNKIEVLTSLLETKSGISFSKEMERSGMRSHVWGNIKLDNYQEN 60
Query: 61 FTQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGT 106
+ R M+ A+ +S ++ ++A+ DAK + + R GV +G+
Sbjct: 61 IDRKIFRFMNDASIYSYLSMKQAIEDAKLTSKMYQNNPRVGVIIGS 106
>sp|Q5TKS0|FABF_STAAU 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment)
OS=Staphylococcus aureus GN=fabF PE=3 SV=1
Length = 403
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 5 VVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQS 64
V+TG+G +SP+G ++ W +G + ++ + +A ++ ++ +
Sbjct: 1 VITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKK 60
Query: 65 KLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ R M R T ++++A REA+ DA+ + NE +R GV +G+G+
Sbjct: 61 EARRMDRFTQYAIVAAREAVKDAQLDI-NENTADRIGVWIGSGI 103
>sp|P72331|NODE_RHIS3 Nodulation protein E OS=Rhizobium sp. (strain N33) GN=nodE PE=3
SV=1
Length = 402
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TG+G + +GT S W ++EG++ + P+ E L I A I+ L
Sbjct: 3 RRVVITGIGGLCGLGTDAPSIWKEMREGRSAIGPIVTSELHGLTGTIGAEIKTLP-EHDI 61
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107
+ +L TM R + +++A REA+ A + +E+ R G VG G
Sbjct: 62 DRKQLVTMDRFSLLAVLAAREAMRQAGLS-CDERNAYRFGAIVGVG 106
>sp|P57193|FABB_BUCAI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=fabB PE=3
SV=1
Length = 406
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAA----RIEGLD 56
M+RVV+TG+GIVS +G ++ ++ +G + + +S E KL + A ++E ++
Sbjct: 1 MRRVVITGIGIVSSIGNNKKEVLASLYKGVSGI--VSSEEMKKLGMRSAVWGNIKLESIN 58
Query: 57 LTAQFTQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107
+ TQ R M+ A+ +S +A EA+ DAK + + ++ R G+ G+G
Sbjct: 59 I---ITQKLSRFMNNASRYSFVAMMEAIKDAKIDREYYQKNPRVGLISGSG 106
>sp|P06230|NODE_RHIME Nodulation protein E OS=Rhizobium meliloti (strain 1021) GN=nodE
PE=3 SV=1
Length = 402
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TG+G + +GT S W ++EG++ + PL E L + A ++ L
Sbjct: 3 RRVVITGMGGLCGLGTDTTSIWKWMREGRSAIGPLLNTELHGLKGIVGAEVKALP-DHNI 61
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ +L +M R + ++IA EA+ A + NE R G VG G+
Sbjct: 62 DRKQLVSMDRISVLAVIAAHEAMRQAGLS-CNEGNALRFGATVGVGL 107
>sp|P43710|FABB_HAEIN 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=fabB PE=3 SV=1
Length = 406
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQ 60
M+R V+TG GI+S +G ++ ++K GK+ + + E + +A I+ L+ +
Sbjct: 1 MRRTVITGFGIISSIGNNKEEVLASLKAGKSGIEVVPEFVEMNMRSHVAGTIK-LNPSEH 59
Query: 61 FTQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107
+ R M A A++ ++ REA+ DA +++ +RTG+ +G G
Sbjct: 60 IDRKVFRFMGDAAAYAYLSMREAIEDAGLT-EDQVSNDRTGLVIGAG 105
>sp|P16538|KAS1_STRGA Tetracenomycin C polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces glaucescens GN=tcmK PE=3 SV=1
Length = 426
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVV+TG+G+ +P G + W+ + G+ +S + + +IA I+ +
Sbjct: 7 KRVVITGIGVRAPGGAGTAAFWDLLTAGRTATRTISLFDAAPYRSRIAGEIDFDPIGEGL 66
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + T RAT +++ REAL D+ +P ER GV++GT +
Sbjct: 67 SPRQASTYDRATQLAVVCAREALKDSGLDPA-AVNPERIGVSIGTAV 112
>sp|P0AAI8|FABF_SHIFL 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri
GN=fabF PE=3 SV=2
Length = 413
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVVVTGLG++SPVG T +S W A+ G++ +S + + S K A ++ +
Sbjct: 4 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 63
Query: 62 TQSKLRTMSRATAFSLIATREALADA 87
++ + R M + ++A +A+ D+
Sbjct: 64 SRKEQRKMDAFIQYGIVAGVQAMQDS 89
>sp|P0AAI5|FABF_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
(strain K12) GN=fabF PE=1 SV=2
Length = 413
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVVVTGLG++SPVG T +S W A+ G++ +S + + S K A ++ +
Sbjct: 4 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 63
Query: 62 TQSKLRTMSRATAFSLIATREALADA 87
++ + R M + ++A +A+ D+
Sbjct: 64 SRKEQRKMDAFIQYGIVAGVQAMQDS 89
>sp|P0AAI6|FABF_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabF PE=3
SV=2
Length = 413
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVVVTGLG++SPVG T +S W A+ G++ +S + + S K A ++ +
Sbjct: 4 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 63
Query: 62 TQSKLRTMSRATAFSLIATREALADA 87
++ + R M + ++A +A+ D+
Sbjct: 64 SRKEQRKMDAFIQYGIVAGVQAMQDS 89
>sp|P0AAI7|FABF_ECO57 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O157:H7 GN=fabF PE=3 SV=2
Length = 413
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVVVTGLG++SPVG T +S W A+ G++ +S + + S K A ++ +
Sbjct: 4 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 63
Query: 62 TQSKLRTMSRATAFSLIATREALADA 87
++ + R M + ++A +A+ D+
Sbjct: 64 SRKEQRKMDAFIQYGIVAGVQAMQDS 89
>sp|Q05357|KAS2_STRHA Putative polyketide beta-ketoacyl synthase 2 OS=Streptomyces
halstedii GN=sch2 PE=3 SV=1
Length = 414
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 51/106 (48%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+R VVTGLG+V+P G ++ W +G + ++ + LP KIA ++ D A
Sbjct: 5 RRAVVTGLGVVAPHGIGAETFWKTAVDGTSSLARIDREGCGHLPLKIAGQVPDFDPAALI 64
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107
+ L R T F++ AT+ AL DA+ + + GV G
Sbjct: 65 EDTYLVQTDRFTHFAMAATQLALDDARLSRADIDSPYSVGVVTAAG 110
>sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti
(strain 1021) GN=fabF PE=3 SV=2
Length = 421
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARI---EGLDL 57
M+RVV+TG G+VSP+G + +W + G ++E E LP KIA RI +G D
Sbjct: 1 MRRVVITGTGMVSPLGCGTEVSWARLLTGDNAARKVTEFEVEDLPAKIACRIPFGDGSDG 60
Query: 58 TAQ----FTQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
T + R + +++ A ALADA W P++++ + TGV +G+G+
Sbjct: 61 TFNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWKPESDEDQISTGVLIGSGI 115
>sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Arabidopsis thaliana GN=KAS PE=1 SV=1
Length = 461
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPE--------------YSKLPCK 47
+RVVVTGLG+V+P+G ++ W + +G+ + L+ + + +L K
Sbjct: 31 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 90
Query: 48 IAARIEGLDLTAQFTQS---KLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGV 102
+AA + +F ++ + ++ +++ A EAL DA+W P E++KERTGV
Sbjct: 91 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGV 148
>sp|P16539|KAS2_STRGA Tetracenomycin C polyketide putative beta-ketoacyl synthase 2
OS=Streptomyces glaucescens GN=tcmL PE=3 SV=2
Length = 409
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 4 VVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQ 63
VVVTGLGIV+P GT + W A GK+ + + + P ++ + D A
Sbjct: 7 VVVTGLGIVAPNGTGTEEYWAATLAGKSGIDVIQRFDPHGYPVRVGGEVLAFDAAAHLPG 66
Query: 64 SKLRTMSRATAFSLIATREALADAKWNPQNEKQKE 98
L R T +L+A ALADA P EKQ E
Sbjct: 67 RLLPQTDRMTQHALVAAEWALADAGLEP--EKQDE 99
>sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2
Length = 473
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVV+TG+G+VS G + + + G++ +S + + SK P + +I G
Sbjct: 61 KRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYI 120
Query: 62 TQSKLRTMSRATAFSLIATREALADAKW--NPQNEKQKERTGVAVGTGM 108
R + + ++A ++AL A + N K + GV VGTGM
Sbjct: 121 DGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGM 169
>sp|P04684|NODE_RHILT Nodulation protein E OS=Rhizobium leguminosarum bv. trifolii
GN=nodE PE=3 SV=2
Length = 401
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TG+G + +GT S W ++EG + +SP+ + L + I+ +
Sbjct: 3 RRVVITGIGGLCGLGTNAASIWKEMREGPSAISPIITTDLYDLEGTVGLEIKAIP-EHDI 61
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107
+ +L +M R + ++IA EA+ A + +E+ R G A+G G
Sbjct: 62 PRKQLVSMDRFSLLAVIAATEAMKQAGLS-CDEQNAHRFGAAMGLG 106
>sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Hordeum vulgare GN=KAS12 PE=1 SV=1
Length = 462
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
KRVV+TG+G+ S G+ + ++ + G++ V P+ + S P + A +I G
Sbjct: 48 KRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRGFSSEGYI 107
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKE----RTGVAVGTGM 108
R + + +++ ++AL A ++ + R GV VGTGM
Sbjct: 108 DGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGM 158
>sp|Q05356|KAS1_STRHA Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
halstedii GN=sch1 PE=3 SV=1
Length = 422
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVVVTG+G+V+P G W+ + G+ +S + ++L +IAA +
Sbjct: 3 RRVVVTGIGVVAPGGIGAARFWDLLAGGRTATRRISLFDPARLRSQIAAECDFDPSAHGL 62
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+R R F+L+AT EA+ DA + E R G +GT +
Sbjct: 63 DDETVRRCDRYVQFALVATAEAVRDAGLDTTRE-DPWRMGAVLGTAV 108
>sp|Q02059|KASA_STRCO Actinorhodin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=SCO5087 PE=1 SV=2
Length = 467
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TG+G+ +P G + W + G+ +S + S ++AA + + F
Sbjct: 46 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGF 105
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+L M RA+ F++ REA A + +P + R GV++G+ +
Sbjct: 106 GPRELDRMDRASQFAVACAREAFAASGLDP-DTLDPARVGVSLGSAV 151
>sp|Q02062|KASB_STRCO Actinorhodin polyketide putative beta-ketoacyl synthase 2
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=SCO5088 PE=1 SV=1
Length = 407
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 4 VVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQ 63
V++TG+G+V+P G W+A+ +G+ + P++ + S+ P +A +I+
Sbjct: 3 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPG 62
Query: 64 SKLRTMSRATAFSLIATREALADAKWNPQN 93
L +T +L A AL DAK +P++
Sbjct: 63 RLLPQTDPSTRLALTAADWALQDAKADPES 92
>sp|P23155|KAS1_STRCO Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)
GN=SCO5318 PE=3 SV=1
Length = 423
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RV VTG+G+V+P G W + EG+ +S + S L +IAA +
Sbjct: 4 RRVAVTGIGVVAPGGIGTPQFWRLLSEGRTATRRISLFDPSGLRSQIAAECDFEPSDHGL 63
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ + R F+L+A EA+ DA + N + R G +GT +
Sbjct: 64 GLATAQRCDRYVQFALVAASEAVRDANLD-MNREDPWRAGATLGTAV 109
>sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic
OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1
Length = 541
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVVVTG+G+ + +G + + + +G + +S + + S+ P +IA I+
Sbjct: 130 RRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWV 189
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQ--NEKQKERTGVAVGTGM 108
+ M + + L A ++ALAD + E K + GV +G+ M
Sbjct: 190 APKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAM 238
>sp|P06231|NOE4_RHIML Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1
Length = 401
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TG+G + +GT S W ++ + P+ E L + A I+ L
Sbjct: 3 RRVVITGMGGLCGLGTDTTSIWKWSARRRSAIGPVLNTELHGLKGIVGAEIKALP-DHNI 61
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ +L +M R + ++IA EA+ A + NE R G VG G+
Sbjct: 62 DRKQLVSMDRISVLAVIAAHEAMRQAGLS-CNEGNALRFGATVGVGL 107
>sp|P04683|NODE_RHILV Nodulation protein E OS=Rhizobium leguminosarum bv. viciae GN=nodE
PE=3 SV=2
Length = 403
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RVV+TGLG + +GT S W ++EG++ + P+S E +L I I+ L
Sbjct: 3 RRVVITGLGGLCGLGTDASSIWTEMREGRSAIGPISNSEIHELKGMIGTEIKVLP-QHDI 61
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ +L +M R + +++A ++A+ A + NE R G VG G
Sbjct: 62 DRKQLISMDRFSLLAVLAAKQAMLQAGLS-CNEGNAHRFGATVGVGF 107
>sp|P41175|KAS1_STRCM Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cinnamonensis PE=3 SV=1
Length = 420
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RV +TG+ +++P G R+ W + EG+ ++ + + K+AA + L
Sbjct: 4 RRVAITGIEVLAPGGLGRKEFWQLLSEGRTATRGITFFDPAPFRSKVAAEADFCGLENGL 63
Query: 62 TQSKLRTMSRATAFSLIATR---EALADAKWNPQNEKQKERTGVAVGTGM 108
+ ++R M RA F+++ R ++ A+ +P + R GV VG+ +
Sbjct: 64 SPQEVRRMDRAAQFAVVTARAVEDSGAELAAHPPH-----RIGVVVGSAV 108
>sp|Q02579|KAS2_STRCN Putative polyketide beta-ketoacyl synthase 2 OS=Streptomyces
cyaneus GN=curB PE=3 SV=1
Length = 419
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+R VTG+G+V+P G + W ++KEG + + ++ LP ++A + G D +A
Sbjct: 11 RRTAVTGIGVVAPNGLHADTYWKSVKEGASVLDRITREGCEHLPLRVAGEVRGFDPSALI 70
Query: 62 TQSKLRTMSRATAF 75
++ L T F
Sbjct: 71 EETFLVQTDLFTHF 84
>sp|Q8KA28|FABB_BUCAP 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)
GN=fabB PE=3 SV=1
Length = 407
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 49/99 (49%)
Query: 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQ 60
MKRVV+TG GI+S +G ++ N++ G + ++ E + S + ++ I+ +
Sbjct: 1 MKRVVITGFGIISSIGNNKKEVLNSLYNGISGITFSEEMKESGMRSQVWGNIKLENKKFF 60
Query: 61 FTQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKER 99
R M+ + ++ ++ +A+ DA + ++ R
Sbjct: 61 KKNKISRFMNNGSIYAFLSMEQAIKDANLQTKQYQKNPR 99
>sp|Q02578|KAS1_STRCN Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cyaneus GN=curA PE=3 SV=1
Length = 422
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQF 61
+RV VTG+G+V+P G + W+ + G+ ++ + L +IAA + L
Sbjct: 3 RRVAVTGIGVVAPGGIGVPAFWDLLSSGRTATRGITLFDPEGLRSRIAAECDFDPLAHGL 62
Query: 62 TQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
+ R F+L+A EA+ D+ + E R V++G+ +
Sbjct: 63 DPELVERADRYIQFALVAADEAVTDSGIDFGTE-NPWRVAVSLGSAV 108
>sp|O69473|FAB2_MYCLE 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium leprae
(strain TN) GN=kasB PE=3 SV=2
Length = 420
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 4 VVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEP--EYSKLPCKIAAR-IEGLDLTAQ 60
VVVTG+ + + + T ++ W + + ++ + L +P E LP +I +E D Q
Sbjct: 16 VVVTGIAMTTALATDAETTWKLLLDNQSGIRMLDDPFIEEFNLPVRIGGHLLEEFD--HQ 73
Query: 61 FTQSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108
T+ +LR M S + +R +A E R V++GTG+
Sbjct: 74 LTRVELRRMGYLQRMSTVLSRRLWENAG---SPEVDTNRLMVSIGTGL 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.127 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,582,738
Number of Sequences: 539616
Number of extensions: 1173778
Number of successful extensions: 2823
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2744
Number of HSP's gapped (non-prelim): 77
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)