Query psy5298
Match_columns 109
No_of_seqs 106 out of 1093
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 22:58:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5298.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5298hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kzu_A 3-oxoacyl-(acyl-carrier 99.9 5.3E-27 1.8E-31 168.6 11.0 107 1-108 9-123 (428)
2 3ho9_A 3-oxoacyl-[acyl-carrier 99.9 4.4E-25 1.5E-29 158.6 13.4 107 1-108 17-123 (427)
3 3o04_A LMO2201 protein, beta-k 99.9 3.8E-25 1.3E-29 158.2 12.2 107 1-108 3-109 (413)
4 1e5m_A KAS II, beta ketoacyl a 99.9 1.1E-24 3.8E-29 156.0 12.9 107 1-108 6-112 (416)
5 4ewg_A Beta-ketoacyl synthase; 99.9 7.4E-25 2.5E-29 156.7 11.4 107 1-108 5-113 (412)
6 1j3n_A 3-oxoacyl-(acyl-carrier 99.9 6.7E-25 2.3E-29 156.7 10.9 106 1-108 1-106 (408)
7 2gqd_A 3-oxoacyl-[acyl-carrier 99.9 1.4E-24 4.7E-29 156.4 12.2 107 1-108 27-133 (437)
8 2vba_A 3-oxoacyl-[acyl-carrier 99.9 5.7E-25 2E-29 157.1 8.1 106 1-108 1-107 (406)
9 1ox0_A Beta ketoacyl-acyl carr 99.9 2.5E-24 8.5E-29 154.8 11.5 107 1-108 22-128 (430)
10 1tqy_A Beta-ketoacyl synthase/ 99.9 3.3E-24 1.1E-28 153.8 9.3 106 1-108 2-108 (424)
11 4ddo_A 3-oxoacyl-[acyl-carrier 99.9 2.7E-24 9.1E-29 155.5 8.0 107 1-108 23-138 (451)
12 1tqy_B Actinorhodin polyketide 99.9 6E-24 2.1E-28 152.1 8.4 106 2-108 9-114 (415)
13 2wge_A 3-oxoacyl-[acyl-carrier 99.9 1.1E-23 3.9E-28 150.9 9.7 104 1-108 11-116 (416)
14 2gp6_A 3-oxoacyl-[acyl-carrier 99.9 3.6E-23 1.2E-27 149.0 12.1 104 1-108 27-132 (434)
15 2iwz_A 3-oxoacyl-[acyl-carrier 99.9 7.2E-24 2.5E-28 152.7 8.1 107 2-108 21-133 (438)
16 3mqd_A Beta-ketoacyl synthase; 99.9 5.3E-24 1.8E-28 153.0 5.9 106 1-108 22-127 (428)
17 2ix4_A 3-oxoacyl-[acyl-carrier 99.9 3.9E-23 1.3E-27 148.6 5.3 103 2-108 1-124 (431)
18 3hhd_A Fatty acid synthase; tr 99.8 3E-20 1E-24 144.0 12.5 107 1-108 3-115 (965)
19 2vz8_A Fatty acid synthase; tr 99.8 7.6E-20 2.6E-24 151.2 12.0 107 1-108 1-113 (2512)
20 2hg4_A DEBS, 6-deoxyerythronol 99.8 1.8E-19 6.1E-24 139.2 11.5 106 2-108 39-151 (917)
21 2qo3_A Eryaii erythromycin pol 99.8 2.4E-19 8.1E-24 138.5 10.1 106 2-108 6-130 (915)
22 2uv8_A Fatty acid synthase sub 99.2 8.4E-12 2.9E-16 101.5 2.5 88 17-109 1158-1252(1887)
23 2uv9_A Fatty acid synthase alp 99.1 1.3E-11 4.3E-16 100.4 0.3 89 16-109 1132-1227(1878)
24 2pff_A Fatty acid synthase sub 99.0 4.6E-12 1.6E-16 101.2 -3.9 89 17-109 959-1053(1688)
25 3zen_D Fatty acid synthase; tr 98.8 6.6E-10 2.3E-14 93.8 1.5 66 43-109 2616-2687(3089)
26 3tsy_A Fusion protein 4-coumar 98.2 6.7E-08 2.3E-12 75.1 -2.9 95 2-107 602-719 (979)
27 2h84_A Steely1; thiolase-fold, 97.3 0.00038 1.3E-08 48.8 5.3 91 3-108 13-126 (374)
28 1mzj_A Beta-ketoacylsynthase I 97.1 0.00022 7.7E-09 49.3 2.7 82 1-108 9-91 (339)
29 1u6e_A 3-oxoacyl-[acyl-carrier 96.9 0.00029 1E-08 48.5 1.8 80 1-108 10-92 (335)
30 1u0m_A Putative polyketide syn 96.3 0.00074 2.5E-08 47.6 0.5 96 4-107 10-114 (382)
31 2x3e_A 3-oxoacyl-[acyl-carrier 94.8 0.018 6E-07 39.6 2.8 78 2-108 4-82 (331)
32 2ebd_A 3-oxoacyl-[acyl-carrier 94.0 0.052 1.8E-06 36.7 3.6 34 70-108 48-81 (309)
33 1ub7_A 3-oxoacyl-[acyl-carrier 93.6 0.096 3.3E-06 35.6 4.5 33 70-108 48-81 (322)
34 1hnj_A Beta-ketoacyl-acyl carr 93.4 0.075 2.6E-06 36.1 3.7 34 70-108 49-82 (317)
35 1zow_A 3-oxoacyl-[acyl-carrier 93.0 0.096 3.3E-06 35.4 3.7 33 71-108 50-82 (313)
36 1ulq_A Putative acetyl-COA ace 93.0 0.11 3.9E-06 36.7 4.1 32 72-108 26-57 (401)
37 1wdk_C 3-ketoacyl-COA thiolase 92.1 0.18 6.2E-06 35.5 4.2 31 72-108 30-62 (390)
38 2iik_A 3-ketoacyl-COA thiolase 92.0 0.15 5.1E-06 36.4 3.7 33 71-108 54-86 (418)
39 1wl4_A Acetyl-coenzyme A acety 91.9 0.18 6.3E-06 35.5 4.1 32 72-108 30-61 (397)
40 2wu9_A 3-ketoacyl-COA thiolase 91.5 0.17 6E-06 36.4 3.7 32 72-108 55-86 (442)
41 1xes_A Dihydropinosylvin synth 90.1 0.27 9.1E-06 35.0 3.5 38 66-108 119-156 (413)
42 1afw_A 3-ketoacetyl-COA thiola 89.9 0.33 1.1E-05 34.2 3.8 32 72-108 35-70 (393)
43 2vu1_A Acetyl-COA acetyltransf 89.5 0.12 4E-06 36.4 1.3 31 72-107 27-57 (392)
44 2ib8_A Acetyl-COA acetyltransf 89.2 0.13 4.4E-06 36.3 1.3 31 72-107 32-62 (395)
45 4e1l_A Acetoacetyl-COA thiolas 88.9 0.58 2E-05 32.9 4.5 32 72-108 29-60 (395)
46 3ss6_A Acetyl-COA acetyltransf 87.4 0.84 2.9E-05 32.1 4.5 32 72-108 29-60 (394)
47 3oit_A OS07G0271500 protein; t 87.3 0.44 1.5E-05 33.6 3.0 38 66-108 90-127 (387)
48 2f82_A HMG-COA synthase; HMGS1 87.0 0.88 3E-05 32.7 4.5 31 72-108 52-83 (450)
49 3il3_A 3-oxoacyl-[acyl-carrier 86.6 0.86 2.9E-05 31.2 4.1 32 72-108 58-89 (323)
50 2d3m_A Pentaketide chromone sy 86.6 0.41 1.4E-05 33.8 2.6 39 64-108 107-146 (406)
51 3goa_A 3-ketoacyl-COA thiolase 86.6 0.73 2.5E-05 32.4 3.9 32 72-108 27-59 (387)
52 3il6_A 3-oxoacyl-[acyl-carrier 86.6 0.81 2.8E-05 31.3 4.0 32 72-108 52-83 (321)
53 4efi_A 3-oxoacyl-(acyl-carrier 85.9 0.96 3.3E-05 31.3 4.1 32 72-108 66-97 (354)
54 2wya_A Hydroxymethylglutaryl-C 85.9 0.92 3.2E-05 32.7 4.2 31 72-108 54-85 (460)
55 4dfe_A 3-oxoacyl-[acyl-carrier 85.6 0.83 2.9E-05 31.3 3.7 83 3-108 11-96 (333)
56 1ted_A PKS18; thiolase fold, s 85.6 0.89 3.1E-05 31.9 3.9 33 70-108 111-144 (393)
57 3ov2_A Curcumin synthase; type 85.4 0.62 2.1E-05 32.9 3.0 38 66-108 96-133 (393)
58 4ewp_A 3-oxoacyl-[acyl-carrier 85.2 0.93 3.2E-05 31.1 3.8 31 72-108 62-93 (350)
59 3h78_A PQS biosynthetic enzyme 85.1 1.2 4.1E-05 31.0 4.3 32 72-108 74-105 (359)
60 3a5r_A Benzalacetone synthase; 84.7 0.58 2E-05 32.8 2.6 39 64-108 90-129 (387)
61 4dd5_A Acetyl-COA acetyltransf 84.7 1.1 3.8E-05 31.5 4.0 32 72-108 31-62 (396)
62 1ee0_A 2-pyrone synthase; poly 84.2 0.67 2.3E-05 32.7 2.8 37 65-107 100-137 (402)
63 1i88_A CHS2, chalcone synthase 83.8 0.67 2.3E-05 32.5 2.6 39 64-108 94-133 (389)
64 3led_A 3-oxoacyl-acyl carrier 83.4 1.7 5.8E-05 30.7 4.5 33 70-108 115-148 (392)
65 3v7i_A Putative polyketide syn 81.6 1.5 5E-05 31.3 3.6 33 71-108 136-168 (413)
66 3svk_A Acetyl-COA acetyltransf 81.4 1.3 4.4E-05 31.4 3.3 31 72-107 32-63 (407)
67 3s21_A 3-oxoacyl-[ACP] synthas 80.8 1.5 5.2E-05 30.1 3.5 81 2-108 11-99 (345)
68 2p0u_A Stilbenecarboxylate syn 80.8 0.99 3.4E-05 32.0 2.6 35 68-108 116-151 (413)
69 3awk_A Chalcone synthase-like 79.1 1.2 4.2E-05 31.4 2.6 34 69-108 112-146 (402)
70 3lma_A Stage V sporulation pro 78.6 1.9 6.5E-05 30.2 3.3 20 72-91 55-74 (347)
71 2p8u_A Hydroxymethylglutaryl-C 78.0 3.4 0.00012 30.0 4.6 31 72-108 73-104 (478)
72 3s3l_A CERJ; acyltransferase, 77.1 3.7 0.00013 28.5 4.5 30 72-107 54-84 (357)
73 3euo_A Type III pentaketide sy 76.2 2.4 8.1E-05 29.7 3.3 34 70-108 79-112 (379)
74 3gwa_A 3-oxoacyl-(acyl-carrier 75.6 2.7 9.1E-05 29.3 3.4 32 72-108 80-111 (365)
75 3s0r_A De novo designed helica 75.6 2.9 9.8E-05 17.9 2.2 13 73-85 17-29 (30)
76 2v4w_A Hydroxymethylglutaryl-C 74.3 4.2 0.00014 29.5 4.3 31 72-108 54-85 (460)
77 3e1h_A PKSIIINC, putative unch 71.3 3.6 0.00012 29.8 3.3 32 72-108 110-141 (465)
78 4egv_A Acetyl-COA acetyltransf 44.2 5.4 0.00019 29.3 0.3 19 73-91 43-61 (520)
79 4gxh_A Pyrrolidone-carboxylate 43.3 23 0.00078 22.9 3.2 24 1-26 2-25 (216)
80 1a2z_A Pyrrolidone carboxyl pe 41.3 31 0.0011 22.4 3.6 30 1-30 1-30 (220)
81 3ro0_A Pyrrolidone-carboxylate 39.1 32 0.0011 22.4 3.4 29 1-29 2-30 (223)
82 1n13_A PVLARGDC, pyruvoyl-depe 36.6 23 0.00078 17.7 1.8 13 78-90 32-44 (52)
83 3lac_A Pyrrolidone-carboxylate 34.7 33 0.0011 22.2 2.9 10 1-10 1-10 (215)
84 4hps_A Pyrrolidone-carboxylate 30.1 45 0.0015 21.8 3.0 10 1-10 23-32 (228)
85 1v8d_A Hypothetical protein (T 29.4 63 0.0022 21.2 3.5 34 69-109 40-73 (235)
86 2c5m_A CTP synthase; cytidine 28.4 30 0.001 23.5 1.9 29 1-30 23-52 (294)
87 2vo1_A CTP synthase 1; pyrimid 28.1 22 0.00076 24.2 1.2 29 1-30 23-52 (295)
88 4ayb_Q DNA-directed RNA polyme 24.6 33 0.0011 19.2 1.3 15 20-34 48-62 (104)
89 3llv_A Exopolyphosphatase-rela 24.3 35 0.0012 19.6 1.5 12 1-12 6-17 (141)
90 1ex7_A Guanylate kinase; subst 24.0 72 0.0025 19.8 3.0 25 2-31 2-26 (186)
91 2cx6_A Hypothetical protein YH 22.5 54 0.0019 17.9 2.0 15 15-29 31-45 (90)
92 4dgk_A Phytoene dehydrogenase; 22.1 28 0.00097 24.5 0.9 25 1-30 1-25 (501)
93 2hmt_A YUAA protein; RCK, KTN, 20.9 35 0.0012 19.2 1.0 12 1-12 6-17 (144)
94 1xpm_A 3-hydroxy-3-methylgluta 20.3 16 0.00053 25.6 -0.7 29 72-108 51-80 (396)
No 1
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.94 E-value=5.3e-27 Score=168.64 Aligned_cols=107 Identities=33% Similarity=0.650 Sum_probs=98.3
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecC-------CCCcCCCCChHhhhcCCHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIE-------GLDLTAQFTQSKLRTMSRAT 73 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~-------~~~~~~~~~~~~~~~~~~~~ 73 (109)
|+||||||||+++|+|.+++++|++|++|+++++++++|+...++..+++.++ .|++..+++++..+.||++.
T Consensus 9 ~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~ 88 (428)
T 3kzu_A 9 MRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKVDPFI 88 (428)
T ss_dssp CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHTTSCHHH
T ss_pred ccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccccccCcCceeeEecccccccccCChhhcCCHHHHHhCCHHH
Confidence 89999999999999999999999999999999999999887778888888887 78888789999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCC-CCCCceEEEEeecC
Q psy5298 74 AFSLIATREALADAKWNPQNE-KQKERTGVAVGTGM 108 (109)
Q Consensus 74 ~~al~a~~eAl~~agl~~~~~-~~~~r~gv~iGt~~ 108 (109)
+|++.|+++||+|||+.+ ++ .+..|+||++|++.
T Consensus 89 ~l~l~aa~~AL~dAGl~~-~~~id~~~~gv~vg~~~ 123 (428)
T 3kzu_A 89 VYAVGAADQALDDAGWHP-ENDEDQVRTGVLIGSGI 123 (428)
T ss_dssp HHHHHHHHHHHHHHTCCC-CSHHHHHTEEEEEECSS
T ss_pred HHHHHHHHHHHHhcCCCh-hhhccccceEEEEcccC
Confidence 999999999999999986 44 56679999999874
No 2
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.93 E-value=4.4e-25 Score=158.57 Aligned_cols=107 Identities=30% Similarity=0.543 Sum_probs=99.9
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIAT 80 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~ 80 (109)
+++|+|||||+++|+|.+++++|++|++|+++++++++|+...++..+.+.+++||+..+++++..+.||++.+|++.|+
T Consensus 17 ~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~aa 96 (427)
T 3ho9_A 17 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG 96 (427)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHHhhCCHHHHHHHHHH
Confidence 46899999999999999999999999999999999999887778888899999999988899999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 81 REALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 81 ~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++||+|||+.+ ++++..|+||++|+++
T Consensus 97 ~~AL~dAGl~~-~~i~~~~~gv~vg~~~ 123 (427)
T 3ho9_A 97 VQAMQDSGLEI-TEENATRIGAAIGSGI 123 (427)
T ss_dssp HHHHHHHTCCC-CTTTGGGEEEEEECSS
T ss_pred HHHHHHCCCCc-ccccccceEEEEcccc
Confidence 99999999986 5678899999999875
No 3
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.93 E-value=3.8e-25 Score=158.24 Aligned_cols=107 Identities=29% Similarity=0.577 Sum_probs=99.9
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIAT 80 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~ 80 (109)
|++|+|||||+++|+|.+.+++|++|++|+++++++++++...++..+.+.+++||+..+++++..+.||++.+|++.|+
T Consensus 3 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~Aa 82 (413)
T 3o04_A 3 KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIASA 82 (413)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHhhCCHHHHHHHHHH
Confidence 57899999999999999999999999999999999998887777888899999999988899999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 81 REALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 81 ~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++||+|||+.+ +++++.|+||++|+++
T Consensus 83 ~~AL~dAGl~~-~~id~~~~gv~vgt~~ 109 (413)
T 3o04_A 83 EMAVQDSGLVI-DDSNANRVGVWIGSGI 109 (413)
T ss_dssp HHHHHHHTCCC-CTTTGGGEEEEEECSS
T ss_pred HHHHHHcCCCh-hHcCccceEEEEcccc
Confidence 99999999986 6778899999999875
No 4
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.92 E-value=1.1e-24 Score=155.96 Aligned_cols=107 Identities=34% Similarity=0.632 Sum_probs=99.4
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIAT 80 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~ 80 (109)
|++|+|||||+++|+|.+.+++|++|++|+++++++++|+...++..+.+.+++||+..+++++..+.||++.+|++.++
T Consensus 6 m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa 85 (416)
T 1e5m_A 6 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS 85 (416)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHHHH
Confidence 57899999999999999999999999999999999999887778888899999999887889999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 81 REALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 81 ~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++||+|||+++ ++++..|+||++|+++
T Consensus 86 ~~Al~dAg~~~-~~i~~~~~gv~~g~~~ 112 (416)
T 1e5m_A 86 QQAINDAKLVI-NELNADEIGVLIGTGI 112 (416)
T ss_dssp HHHHHHHTCCC-CTTTGGGEEEEEECSS
T ss_pred HHHHHHcCCCh-hhcCccceEEEEeecC
Confidence 99999999986 5677889999999875
No 5
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.92 E-value=7.4e-25 Score=156.75 Aligned_cols=107 Identities=33% Similarity=0.526 Sum_probs=98.2
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcC-CCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYS-KLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIA 79 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a 79 (109)
|++|+|||||+++|+|.+.+++|++|++|++++++++.|+.. .++..+.+.+++|++..+++++..+.||++.+|++.|
T Consensus 5 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~a 84 (412)
T 4ewg_A 5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVRA 84 (412)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHHH
T ss_pred CCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHHH
Confidence 789999999999999999999999999999999999987654 6778888999999988889999999999999999999
Q ss_pred HHHHHHHcCC-CCCCCCCCCceEEEEeecC
Q psy5298 80 TREALADAKW-NPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 80 ~~eAl~~agl-~~~~~~~~~r~gv~iGt~~ 108 (109)
+++||+|||+ ++ +.++..|+||++|++.
T Consensus 85 a~~Al~dAGl~~~-~~i~~~~~gv~~g~~~ 113 (412)
T 4ewg_A 85 SELALADAGFAGD-ESISDGRMGVAYGSSS 113 (412)
T ss_dssp HHHHHHHHTCTTC-GGGGTTTEEEEEECSC
T ss_pred HHHHHHhcCCCCc-cccCccceEEEEeccC
Confidence 9999999999 54 5567899999999875
No 6
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.92 E-value=6.7e-25 Score=156.69 Aligned_cols=106 Identities=40% Similarity=0.648 Sum_probs=98.1
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIAT 80 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~ 80 (109)
|++|+|||||+++|+|.+++++|++|++|+++++++++|+...++..+.+++ +||+..+++++..+.||++.+|++.++
T Consensus 1 M~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~fd~~~~~~~~~~~~~d~~~~l~~~aa 79 (408)
T 1j3n_A 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAA 79 (408)
T ss_dssp CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccCcccCccceEEEE-ccChhhcCCHHHHHhcCHHHHHHHHHH
Confidence 8899999999999999999999999999999999999887777788888999 799887889999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 81 REALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 81 ~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++||+|||+++ ++++..++||++|++.
T Consensus 80 ~~AL~dAGl~~-~~id~~~~gv~~g~~~ 106 (408)
T 1j3n_A 80 QLALEDAGLKP-EDLDPERVGTLVGTGI 106 (408)
T ss_dssp HHHHHHHTCCG-GGSCGGGEEEEEECSS
T ss_pred HHHHHHcCCCc-cccCCCceEEEEEecC
Confidence 99999999986 5677889999999875
No 7
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.92 E-value=1.4e-24 Score=156.43 Aligned_cols=107 Identities=28% Similarity=0.592 Sum_probs=98.6
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIAT 80 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~ 80 (109)
|++|+|||||+++|+|.+++++|++|++|+++++++++|+...++..+.+++++||+...++++..+.||++.+|++.++
T Consensus 27 ~~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa 106 (437)
T 2gqd_A 27 NKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAA 106 (437)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHHHHH
T ss_pred CCCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHHHHH
Confidence 47899999999999999999999999999999999998877778888899999999877788899999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 81 REALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 81 ~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++||+|||+++ ++++..|+||++|+++
T Consensus 107 ~~AL~dAGl~~-~~i~~~~~gv~vg~~~ 133 (437)
T 2gqd_A 107 REAVKDAQLDI-NENTADRIGVWIGSGI 133 (437)
T ss_dssp HHHHHHHTCCC-CTTTGGGEEEEEECSS
T ss_pred HHHHHHcCCCc-cccCCcceEEEEeecC
Confidence 99999999986 5677899999999875
No 8
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.91 E-value=5.7e-25 Score=157.12 Aligned_cols=106 Identities=32% Similarity=0.541 Sum_probs=96.1
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIAT 80 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~ 80 (109)
|++|+|||||+++|+|.+.+++|++|++|+++++++++|+...++..+.++++ ||+..+++++..+.||++.+|++.++
T Consensus 1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~~~~l~l~aa 79 (406)
T 2vba_A 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSM 79 (406)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEec-CChhhcCCHHHHHhcCHHHHHHHHHH
Confidence 78999999999999999999999999999999999987765667778889998 99888899999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCC-CceEEEEeecC
Q psy5298 81 REALADAKWNPQNEKQK-ERTGVAVGTGM 108 (109)
Q Consensus 81 ~eAl~~agl~~~~~~~~-~r~gv~iGt~~ 108 (109)
+|||+|||+++ +.++. +|+||++|++.
T Consensus 80 ~~Al~dAg~~~-~~i~~~~~~gv~vg~~~ 107 (406)
T 2vba_A 80 EQAIADAGLSP-EAYQNNPRVGLIAGSGG 107 (406)
T ss_dssp HHHHHHHTCCH-HHHTTCTTEEEEEECSS
T ss_pred HHHHHHCCCCh-hHcCCCCCEEEEEEECC
Confidence 99999999975 44556 89999999875
No 9
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.91 E-value=2.5e-24 Score=154.76 Aligned_cols=107 Identities=28% Similarity=0.528 Sum_probs=98.6
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIAT 80 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~ 80 (109)
|++|+|||||+++|+|.+.+++|++|++|+++++++++|+...++..+.+.+++||+..+++++..+.||++.+|++.++
T Consensus 22 m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~aa 101 (430)
T 1ox0_A 22 LNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAA 101 (430)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHHHHHHHHH
T ss_pred CCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHHHHHHHHH
Confidence 57899999999999999999999999999999999998887778888889999998877788899999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 81 REALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 81 ~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++||+|||+++ ++++..|+||++|+++
T Consensus 102 ~~AL~dAG~~~-~~i~~~~~gv~vg~~~ 128 (430)
T 1ox0_A 102 QEAVNHANLDV-EALNRDRFGVIVASGI 128 (430)
T ss_dssp HHHHHHTTCCT-TTSCGGGEEEEEECSS
T ss_pred HHHHHHcCCCh-hhcCccceEEEEEecC
Confidence 99999999986 5678899999999875
No 10
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.91 E-value=3.3e-24 Score=153.82 Aligned_cols=106 Identities=29% Similarity=0.543 Sum_probs=96.1
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCC-CChHhhhcCCHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQ-FTQSKLRTMSRATAFSLIA 79 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~al~a 79 (109)
+++|+|||||+++|+|.+.+++|++|++|+++++++++|+...++..+.+++ +||+..+ ++++..+.||++.+|++.+
T Consensus 2 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~-~fd~~~~~i~~~~~~~~d~~~~l~l~a 80 (424)
T 1tqy_A 2 KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEA-DFDPVAEGFGPRELDRMDRASQFAVAC 80 (424)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCHHHHTCCHHHHHHSCHHHHHHHHH
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcccccCCcceeEEe-ccCHhhcCCCHHHHHhcCHHHHHHHHH
Confidence 1489999999999999999999999999999999999887777778888888 7887766 8999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 80 TREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 80 ~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
+++||+|||+++ ++++..|+||++|+++
T Consensus 81 a~~AL~dAG~~~-~~i~~~~~gv~~g~~~ 108 (424)
T 1tqy_A 81 AREAFAASGLDP-DTLDPARVGVSLGSAV 108 (424)
T ss_dssp HHHHHHHHTCCT-TTCCGGGEEEEEECSS
T ss_pred HHHHHHHCCCCc-hhcCCCceEEEEEeCC
Confidence 999999999986 5677899999999875
No 11
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.90 E-value=2.7e-24 Score=155.46 Aligned_cols=107 Identities=35% Similarity=0.647 Sum_probs=96.7
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecC--------CCCcCCCCChHhhhcCCHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIE--------GLDLTAQFTQSKLRTMSRA 72 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~--------~~~~~~~~~~~~~~~~~~~ 72 (109)
|++|+|||||+++|+|.+++++|++|++|+++++++++|+...++..++|+++ .||+..+++++..+.||++
T Consensus 23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 102 (451)
T 4ddo_A 23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRF 102 (451)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSCHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCCHH
Confidence 36899999999999999999999999999999999998776677888889887 6888877999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC-CCCceEEEEeecC
Q psy5298 73 TAFSLIATREALADAKWNPQNEK-QKERTGVAVGTGM 108 (109)
Q Consensus 73 ~~~al~a~~eAl~~agl~~~~~~-~~~r~gv~iGt~~ 108 (109)
.+|++.|+++||+|||+.+ +++ +..|+||++|++.
T Consensus 103 ~~L~l~Aa~~AL~dAGl~~-~~i~d~~~~gv~vgt~~ 138 (451)
T 4ddo_A 103 IQMAMVAADEALAEAGWAP-EAEQQRERTATVVASGI 138 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCC-CSHHHHTTEEEEEECSS
T ss_pred HHHHHHHHHHHHHHcCCCh-hhcccccceEEEEeecC
Confidence 9999999999999999986 555 6789999999875
No 12
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.90 E-value=6e-24 Score=152.11 Aligned_cols=106 Identities=26% Similarity=0.464 Sum_probs=96.5
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHHH
Q psy5298 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIATR 81 (109)
Q Consensus 2 ~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~~ 81 (109)
++|+|||||+++|+|.+.+++|++|++|+++++++++|+...++..+.+++++||+..+++++..+.||++.+|++.+++
T Consensus 9 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~aa~ 88 (415)
T 1tqy_B 9 KSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAAD 88 (415)
T ss_dssp -CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHHHH
Confidence 58999999999999999999999999999999999988766677888899999988767888899999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 82 EALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 82 eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
+||+|||+++ ++++..|+||++|++.
T Consensus 89 ~AL~dAGl~~-~~id~~~~gv~~g~~~ 114 (415)
T 1tqy_B 89 WALQDAKADP-ESLTDYDMGVVTANAC 114 (415)
T ss_dssp HHHHHTTCCG-GGSCGGGEEEEEECSS
T ss_pred HHHHHcCCCc-cccCCCCEEEEEeeCC
Confidence 9999999986 5677889999999874
No 13
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.90 E-value=1.1e-23 Score=150.89 Aligned_cols=104 Identities=21% Similarity=0.348 Sum_probs=92.6
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCC--cCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPE--YSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLI 78 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~ 78 (109)
|++|+|||||+++|+|.+++++|++|++|+++++++++|+ ...++..+.|++++ |+..+++++..+.||++.+|++.
T Consensus 11 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~d~~~~l~l~ 89 (416)
T 2wge_A 11 FPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMGRLDMRRMSYVQRMGKL 89 (416)
T ss_dssp SCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSS-CGGGGCCHHHHHHSCHHHHHHHH
T ss_pred CCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCC-chhhhCCHHHHHhcCHHHHHHHH
Confidence 5689999999999999999999999999999999999875 34567788899987 66667899999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 79 ATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 79 a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++++||+|||+. .++.+|+||++|+++
T Consensus 90 aa~~AL~dAG~~---~~~~~~~gv~vg~~~ 116 (416)
T 2wge_A 90 LGGQLWESAGSP---EVDPDRFAVVVGTGL 116 (416)
T ss_dssp HHHHHHHHTTCC---CCCGGGEEEEEECCS
T ss_pred HHHHHHHHcCCC---ccCCCceEEEEeecC
Confidence 999999999983 456789999999875
No 14
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.90 E-value=3.6e-23 Score=149.00 Aligned_cols=104 Identities=25% Similarity=0.446 Sum_probs=92.5
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCC--cCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPE--YSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLI 78 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~ 78 (109)
+++|+|||||+++|+|.+++++|++|++|+++++++++|+ ...++..+.|++++ |+..+++++..+.||++.+|++.
T Consensus 27 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~-d~~~~~~~~~~~~~d~~~~l~l~ 105 (434)
T 2gp6_A 27 FPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDHQLTRIELRRMGYLQRMSTV 105 (434)
T ss_dssp SCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSC-CSTTSSCHHHHHTCCHHHHHHHH
T ss_pred CCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCC-chhhhCCHHHHHhCCHHHHHHHH
Confidence 4689999999999999999999999999999999999875 44667788899986 66667899999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 79 ATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 79 a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++++||+|||+. ..+++|+||++|++.
T Consensus 106 aa~~ALedAG~~---~~~~~~igv~vgt~~ 132 (434)
T 2gp6_A 106 LSRRLWENAGSP---EVDTNRLMVSIGTGL 132 (434)
T ss_dssp HHHHHHHHTTCC---CCCTTSEEEEEECSS
T ss_pred HHHHHHHhcCCC---ccCCCceEEEEcccc
Confidence 999999999983 356789999999875
No 15
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.90 E-value=7.2e-24 Score=152.73 Aligned_cols=107 Identities=34% Similarity=0.688 Sum_probs=95.7
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCC------CCcCCCCChHhhhcCCHHHHH
Q psy5298 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEG------LDLTAQFTQSKLRTMSRATAF 75 (109)
Q Consensus 2 ~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~------~~~~~~~~~~~~~~~~~~~~~ 75 (109)
++|+|||||+++|+|.+++++|++|++|+++++++++|+...++..+.+++++ ||+..+++++..+.||++.+|
T Consensus 21 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~l 100 (438)
T 2iwz_A 21 RRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTIM 100 (438)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHHH
T ss_pred CCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHHH
Confidence 58999999999999999999999999999999999988777778888899876 888777899999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 76 SLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 76 al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++.++++||+|||+++.+.++..|+||++|+++
T Consensus 101 ~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~ 133 (438)
T 2iwz_A 101 AIGAAELAMKDSGWHPQSEADQVATGVAIGMGM 133 (438)
T ss_dssp HHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESC
T ss_pred HHHHHHHHHHHcCCCCcccccCcceEEEEeccc
Confidence 999999999999997413445679999999875
No 16
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.89 E-value=5.3e-24 Score=153.02 Aligned_cols=106 Identities=33% Similarity=0.539 Sum_probs=95.5
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIAT 80 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~ 80 (109)
|++|+|||||+++|+|.+.+++|++|++|+++++++++|+...++..+.|. .+||+..+++++..+.||++.+|++.++
T Consensus 22 m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~-~~fd~~~~i~~~~~~~~d~~~~l~~~aa 100 (428)
T 3mqd_A 22 MRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVHGA-PDIDIESLVDRRAMRFHGRGTAWNHIAM 100 (428)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEEC-CCCCHHHHSCTGGGTTCCHHHHHHHHHH
T ss_pred CCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCcccccCCCcccccc-cCCChhhcCCHHHHhhCCHHHHHHHHHH
Confidence 689999999999999999999999999999999999887666677777777 4688877789999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 81 REALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 81 ~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
+|||+|||+++ +.++..|+||++|++.
T Consensus 101 ~~Al~dAGl~~-~~i~~~~~Gv~~g~~~ 127 (428)
T 3mqd_A 101 DQAIADAGLTE-EEVSNERTGIIMGSGG 127 (428)
T ss_dssp HHHHHHHTCCH-HHHSSTTEEEEEEESS
T ss_pred HHHHHHcCCCh-hHccccceEEEEccCC
Confidence 99999999986 5667899999999874
No 17
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.87 E-value=3.9e-23 Score=148.62 Aligned_cols=103 Identities=34% Similarity=0.672 Sum_probs=87.8
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCC--------------cCCCCcceeeecC------CCCcCCCC
Q psy5298 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPE--------------YSKLPCKIAARIE------GLDLTAQF 61 (109)
Q Consensus 2 ~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~--------------~~~~~~~~~~~i~------~~~~~~~~ 61 (109)
++|+|||||+++|+|.+++++|++|++|+++++++++|+ ...+++.++++++ +||+..++
T Consensus 1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~ 80 (431)
T 2ix4_A 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (431)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcC
Confidence 589999999999999999999999999999999998765 2245677788887 57765556
Q ss_pred ChHhhhcCCHHHHHHHHHHHHHHHHcCC-CCCCCCCCCceEEEEeecC
Q psy5298 62 TQSKLRTMSRATAFSLIATREALADAKW-NPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 62 ~~~~~~~~~~~~~~al~a~~eAl~~agl-~~~~~~~~~r~gv~iGt~~ 108 (109)
+++ .||++.+|++.|+++||+|||+ ++ +..+..|+||++|++.
T Consensus 81 ~~~---~~d~~~~l~l~aa~~AL~dAG~~~~-~~i~~~~~gv~vg~~~ 124 (431)
T 2ix4_A 81 NSK---AVANFIGYAVCAADEALRDAEWLPT-EEEEKERTGVSIGGGI 124 (431)
T ss_dssp CST---TCCHHHHHHHHHHHHHHHHTTCCCC-SHHHHHTEEEEEEESS
T ss_pred Chh---hCCHHHHHHHHHHHHHHHHcCCCCc-cccCCCCEEEEEeecc
Confidence 554 8999999999999999999999 75 4456679999999875
No 18
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.84 E-value=3e-20 Score=144.04 Aligned_cols=107 Identities=22% Similarity=0.265 Sum_probs=90.0
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCC--CcceeeecCC---CCcCCC-CChHhhhcCCHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKL--PCKIAARIEG---LDLTAQ-FTQSKLRTMSRATA 74 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~--~~~~~~~i~~---~~~~~~-~~~~~~~~~~~~~~ 74 (109)
+++|+||||||++|.|.+++++|++|.+|++++++.++.+...+ .....|.+++ ||+..+ ++++..+.||++.+
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r 82 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR 82 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence 57899999999999999999999999999999998775332221 1123455544 888766 89999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 75 FSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 75 ~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
|++.+++|||+|||+++ +.++..++||++|++.
T Consensus 83 L~leaa~eALedAGi~~-~~i~~~~~Gv~vG~~~ 115 (965)
T 3hhd_A 83 LLLEVTYEAIVDGGINP-DSLRGTHTGVWVGVSG 115 (965)
T ss_dssp HHHHHHHHHHHHTTCCG-GGGTTSCCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCh-HHcCCceeEEEEeccc
Confidence 99999999999999997 6778899999999764
No 19
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.82 E-value=7.6e-20 Score=151.24 Aligned_cols=107 Identities=22% Similarity=0.268 Sum_probs=90.4
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCCCceeeCCCCCcCCCC--cceeeecCC---CCcCCC-CChHhhhcCCHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGKACVSPLSEPEYSKLP--CKIAARIEG---LDLTAQ-FTQSKLRTMSRATA 74 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s~i~~~~~~~~~~~~--~~~~~~i~~---~~~~~~-~~~~~~~~~~~~~~ 74 (109)
|++|+||||||++|.|++++++|++|.+|++++++.++.+....+ ....|.+++ ||+..+ ++++..+.||++++
T Consensus 1 m~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~r 80 (2512)
T 2vz8_A 1 MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLR 80 (2512)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhcCHHHH
Confidence 789999999999999999999999999999999987643222111 234566654 888776 89999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 75 FSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 75 ~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
+++.+++|||+|||+.+ ..+.+.|+||++|++.
T Consensus 81 l~l~~~~eAle~Ag~~~-~~~~~~~~gv~~G~~~ 113 (2512)
T 2vz8_A 81 MLLEVTYEAIVDGGINP-ASLRGTSTGVWVGVSS 113 (2512)
T ss_dssp HHHHHHHHHHGGGTCCG-GGGTTCSCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCCh-hhcCCCCeEEEEEecc
Confidence 99999999999999986 5678899999999875
No 20
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.81 E-value=1.8e-19 Score=139.23 Aligned_cols=106 Identities=17% Similarity=0.258 Sum_probs=89.7
Q ss_pred CcEEEEecceeCCCC-CCHHHHHHHHHcCCCceeeCCCC--CcCCCCcceeeecCC---CCcCCC-CChHhhhcCCHHHH
Q psy5298 2 KRVVVTGLGIVSPVG-TTRQSAWNAIKEGKACVSPLSEP--EYSKLPCKIAARIEG---LDLTAQ-FTQSKLRTMSRATA 74 (109)
Q Consensus 2 ~~V~ItG~g~vs~lG-~~~~~~~~~l~~g~s~i~~~~~~--~~~~~~~~~~~~i~~---~~~~~~-~~~~~~~~~~~~~~ 74 (109)
++|+|||||+++|.| .+++++|++|++|++++++++.. .........+|++++ ||+..+ ++++..+.||++.+
T Consensus 39 ~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~~r 118 (917)
T 2hg4_A 39 EPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEPDPDARLGGMLAAAGDFDAGFFGISPREALAMDPQQR 118 (917)
T ss_dssp CCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCCCSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHHHH
T ss_pred CCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCCCCCcceeeEecCccccChhhcCCCHHHHHhcCHHHH
Confidence 479999999999998 67999999999999999987642 122233566787764 887665 89999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 75 FSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 75 ~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
|++.+++|||+|||+.+ +.++..|+||++|++.
T Consensus 119 l~leaa~eALedAGi~~-~~i~~~~~gV~vG~~~ 151 (917)
T 2hg4_A 119 IMLEISWEALERAGHDP-VSLRGSATGVFTGVGT 151 (917)
T ss_dssp HHHHHHHHHHHHTTCCG-GGGTTSCEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCh-HHcCCcceEEEEEeCC
Confidence 99999999999999986 5678899999999874
No 21
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.80 E-value=2.4e-19 Score=138.52 Aligned_cols=106 Identities=17% Similarity=0.272 Sum_probs=89.3
Q ss_pred CcEEEEecceeCCCC-CCHHHHHHHHHcCCCceeeCCC---CCcC-----------CCCcceeeecCC---CCcCCC-CC
Q psy5298 2 KRVVVTGLGIVSPVG-TTRQSAWNAIKEGKACVSPLSE---PEYS-----------KLPCKIAARIEG---LDLTAQ-FT 62 (109)
Q Consensus 2 ~~V~ItG~g~vs~lG-~~~~~~~~~l~~g~s~i~~~~~---~~~~-----------~~~~~~~~~i~~---~~~~~~-~~ 62 (109)
.+|+|||||+++|.| ++++++|++|++|+++++.++. |+.. ..+...+|++++ ||+..+ ++
T Consensus 6 ~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i~ 85 (915)
T 2qo3_A 6 DPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGVS 85 (915)
T ss_dssp CCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTCC
T ss_pred CCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCCC
Confidence 479999999999999 8999999999999999998774 3211 123456777764 777655 89
Q ss_pred hHhhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 63 QSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 63 ~~~~~~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++..+.||++.+|++.+++|||+|||+.+ +.++..|+||++|++.
T Consensus 86 ~~ea~~mdp~~rL~leaa~eALedAGi~~-~~i~~~~~gV~vG~~~ 130 (915)
T 2qo3_A 86 PREAAAMDPQQRLLLETSWELVENAGIDP-HSLRGTATGVFLGVAK 130 (915)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHTTCCG-GGGTTBCCEEEEECCC
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHcCCCh-HHcCCcceEEEEEecC
Confidence 99999999999999999999999999986 5678899999999874
No 22
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.16 E-value=8.4e-12 Score=101.49 Aligned_cols=88 Identities=18% Similarity=0.255 Sum_probs=75.5
Q ss_pred CCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecC-CCCcCCC-CChHhhhcCCHHHHHHHHHHHHHHHHcCCC-CCC
Q psy5298 17 TTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIE-GLDLTAQ-FTQSKLRTMSRATAFSLIATREALADAKWN-PQN 93 (109)
Q Consensus 17 ~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~-~~~~~~~-~~~~~~~~~~~~~~~al~a~~eAl~~agl~-~~~ 93 (109)
.+++++|++|.+|++++.+.. ..++..++|+|+ +||+..+ ++++..+.||++.+|++.+++|||++||+. + .
T Consensus 1158 ~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~dAGi~dp-~ 1232 (1887)
T 2uv8_A 1158 PETGEYSVKLLKGATLYIPKA----LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDP-Y 1232 (1887)
T ss_dssp TTTSCEEEEECTTCEEEEEEE----ECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHHHTTCSSG-G
T ss_pred CchHHHHHHHHcCCceeeccc----CCCCccEEEEECCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCCh-h
Confidence 357899999999999999863 345667899997 7999877 999999999999999999999999999995 4 2
Q ss_pred C----CCCCceEEEEeecCC
Q psy5298 94 E----KQKERTGVAVGTGMI 109 (109)
Q Consensus 94 ~----~~~~r~gv~iGt~~~ 109 (109)
. ++..++||++|++.+
T Consensus 1233 e~~~~i~~s~vGv~vGs~~g 1252 (1887)
T 2uv8_A 1233 EMYKYVHVSEVGNCSGSGMG 1252 (1887)
T ss_dssp GHHHHSCGGGEEECCEESSC
T ss_pred hhhcccCCceeEEEeccCCc
Confidence 3 578899999999854
No 23
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.08 E-value=1.3e-11 Score=100.37 Aligned_cols=89 Identities=18% Similarity=0.277 Sum_probs=75.9
Q ss_pred CCCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecC-CCCcCCC-CChHhhhcCCHHHHHHHHHHHHHHHHcCCC-CC
Q psy5298 16 GTTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIE-GLDLTAQ-FTQSKLRTMSRATAFSLIATREALADAKWN-PQ 92 (109)
Q Consensus 16 G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~-~~~~~~~-~~~~~~~~~~~~~~~al~a~~eAl~~agl~-~~ 92 (109)
..+++++|++|.+|++++.+.. ..++...+|+|+ +||+..+ ++++..+.||+..+|++.++.|||++||+. +
T Consensus 1132 ~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~~AGi~~p- 1206 (1878)
T 2uv9_A 1132 IPETGQYTVRLRKGATLLIPKA----LQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDP- 1206 (1878)
T ss_dssp CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEEECCTTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHHHTTTCSSG-
T ss_pred CCChHHHHHHHHcCCCeeeecC----CCCcceEEEEeCCCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHCCCCCh-
Confidence 3567899999999999999853 345667899997 6998776 999999999999999999999999999997 4
Q ss_pred CC----CCCCceEEEEeecCC
Q psy5298 93 NE----KQKERTGVAVGTGMI 109 (109)
Q Consensus 93 ~~----~~~~r~gv~iGt~~~ 109 (109)
.. ++..++|+++|++.+
T Consensus 1207 ~e~~~~i~~s~vGv~vGsg~g 1227 (1878)
T 2uv9_A 1207 YEFYKYVHLSEVGNCIGSGVG 1227 (1878)
T ss_dssp GGHHHHSCGGGEEEEEEESSC
T ss_pred hhhhcccCccceEEEEccCCc
Confidence 23 578899999999864
No 24
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.03 E-value=4.6e-12 Score=101.21 Aligned_cols=89 Identities=17% Similarity=0.231 Sum_probs=74.2
Q ss_pred CCHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecC-CCCcCCC-CChHhhhcCCHHHHHHHHHHHHHHHHcCCC-CCC
Q psy5298 17 TTRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIE-GLDLTAQ-FTQSKLRTMSRATAFSLIATREALADAKWN-PQN 93 (109)
Q Consensus 17 ~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~-~~~~~~~-~~~~~~~~~~~~~~~al~a~~eAl~~agl~-~~~ 93 (109)
.+++++|++|.+|++++.+.. ..++...+|+|+ +||+..+ ++++..+.||++.+|++.+++|||++||+. +.+
T Consensus 959 ~~~eefW~~L~~G~~~i~p~~----~~~~~~vaG~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedAGI~dP~e 1034 (1688)
T 2pff_A 959 PETGEYSVKLLKGATLYIPKA----LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYE 1034 (1688)
T ss_dssp CCCCSSSCCCCCCTTCCCCCC----CCEECCSSCSCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTTTCSSGGG
T ss_pred CCHHHHHHHHHcCCCEEecCC----CCCCceEEEEECCCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHcCCCChHH
Confidence 357899999999999999843 334566788897 6999877 999999999999999999999999999997 422
Q ss_pred ---CCCCCceEEEEeecCC
Q psy5298 94 ---EKQKERTGVAVGTGMI 109 (109)
Q Consensus 94 ---~~~~~r~gv~iGt~~~ 109 (109)
.++..++|+++|++.+
T Consensus 1035 i~~~i~~s~vGV~vGSg~G 1053 (1688)
T 2pff_A 1035 MYKYVHVSEVGNCSGSGMG 1053 (1688)
T ss_dssp GGGGTCCSCSCCCCCCCSC
T ss_pred hccccCCceEEEEecccCC
Confidence 1578899999998764
No 25
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.83 E-value=6.6e-10 Score=93.82 Aligned_cols=66 Identities=26% Similarity=0.435 Sum_probs=57.0
Q ss_pred CCCcceeeecC-CCCcCCC-CChHhhhcCCHHHHHHHHHHHHHHHHcCCCCCCCC----CCCceEEEEeecCC
Q psy5298 43 KLPCKIAARIE-GLDLTAQ-FTQSKLRTMSRATAFSLIATREALADAKWNPQNEK----QKERTGVAVGTGMI 109 (109)
Q Consensus 43 ~~~~~~~~~i~-~~~~~~~-~~~~~~~~~~~~~~~al~a~~eAl~~agl~~~~~~----~~~r~gv~iGt~~~ 109 (109)
.+++.++|+|+ +||+..+ ++++..+.||++.+|++.++++||+|||+++ +.+ +..|+||++|++.+
T Consensus 2616 ~~~~~~gG~i~d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p-~~l~~~~~~~~vGV~vG~~~g 2687 (3089)
T 3zen_D 2616 KLSRTVGAQIPTGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTP-TELMRWVHPSQVASTQGTGMG 2687 (3089)
T ss_dssp CCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCG-GGHHHHSCGGGEEEEEEESSC
T ss_pred CccceEEEEcCCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCH-HHhhcccCcceeEEEEeecCc
Confidence 35677889995 6999877 9999999999999999999999999999986 333 67899999998753
No 26
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=98.17 E-value=6.7e-08 Score=75.09 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=58.8
Q ss_pred CcEEEEecceeCCCC-------------CCHHHHHHHH------HcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCC
Q psy5298 2 KRVVVTGLGIVSPVG-------------TTRQSAWNAI------KEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFT 62 (109)
Q Consensus 2 ~~V~ItG~g~vs~lG-------------~~~~~~~~~l------~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 62 (109)
.++.|||+|...|.+ .+.+++|+.+ +.+++||.....+........ .+++..++.
T Consensus 602 ~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~------~~~~~~~~~ 675 (979)
T 3tsy_A 602 GPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEE------HPNIGAYMA 675 (979)
T ss_dssp SCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHH------CHHHHSSSS
T ss_pred CCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhc------CcccccccC
Confidence 479999999999988 5555666666 667788876654432111111 111222222
Q ss_pred ----hHhhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeec
Q psy5298 63 ----QSKLRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107 (109)
Q Consensus 63 ----~~~~~~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~ 107 (109)
.+..+.......|+..|+++||++||+++ ++++ .++++|+
T Consensus 676 ~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~-~dId----~ii~~t~ 719 (979)
T 3tsy_A 676 PSLNIRQEIITAEVPKLGKEAALKALKEWGQPK-SKIT----HLVFCTT 719 (979)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCG-GGCC----EEEEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-HHCC----EEEEEee
Confidence 23334444567799999999999999986 2222 2566654
No 27
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=97.30 E-value=0.00038 Score=48.77 Aligned_cols=91 Identities=15% Similarity=0.108 Sum_probs=54.2
Q ss_pred cEEEEecceeCCCCC-CHHHHHHHHHcC----------------CCceeeCCCCCcCCCCcceeeecCCCCcCCC-CChH
Q psy5298 3 RVVVTGLGIVSPVGT-TRQSAWNAIKEG----------------KACVSPLSEPEYSKLPCKIAARIEGLDLTAQ-FTQS 64 (109)
Q Consensus 3 ~V~ItG~g~vs~lG~-~~~~~~~~l~~g----------------~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~ 64 (109)
.|.|+|+|+..|-.. +.+++|+.+... ++||......... + .+++..+ .+..
T Consensus 13 ~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~---------~-~~~~~~~~~~~~ 82 (374)
T 2h84_A 13 NSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDY---------T-KPENSIKFRHLE 82 (374)
T ss_dssp CCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCT---------T-SGGGCGGGGGGC
T ss_pred CeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCc---------c-ccccccccCChH
Confidence 589999999999874 688888876432 2333322110000 0 1222211 1122
Q ss_pred hhhcC-----CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 65 KLRTM-----SRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 65 ~~~~~-----~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
....+ +....|+..|+++||+++|+++ +++ -++++||++
T Consensus 83 ~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~-~~i----d~vi~~t~~ 126 (374)
T 2h84_A 83 TITDVNNQFKKVVPDLAQQACLRALKDWGGDK-GDI----THIVSVTST 126 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCG-GGC----CEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHC----CEEEEEeeC
Confidence 22223 6789999999999999999986 322 256777764
No 28
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=97.14 E-value=0.00022 Score=49.33 Aligned_cols=82 Identities=20% Similarity=0.168 Sum_probs=48.5
Q ss_pred CCcEEEEecceeCCCCC-CHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGT-TRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIA 79 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~-~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a 79 (109)
|++++|+|+|+..|-.. +.+++|+.+. .+ +.+ +. ...| ....... ....+...|++.|
T Consensus 9 ~~~~~I~gig~~~P~~~~~~~~~~~~~~--~~-----~~~----i~-~~~G----i~~R~~~-----~~~~~~~~la~~A 67 (339)
T 1mzj_A 9 RRFSRVLGVGSYRPRREVSNKEVCTWID--ST-----EEW----IE-TRTG----IRSRRIA-----EPDETIQVMGVAA 67 (339)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHTTTSS--CC-----HHH----HH-HHHC----CSEEECC-----CTTCCHHHHHHHH
T ss_pred cCceEEEEEEEeCCCccccHHHHHHHhC--CC-----HHH----HH-HhcC----ceEEEEe-----CCCCCHHHHHHHH
Confidence 46799999999999875 4666655431 10 000 00 0000 0000000 0124578999999
Q ss_pred HHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 80 TREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 80 ~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
+++||+++|+++ ++++ +|++|+++
T Consensus 68 a~~al~~ag~~~-~~id----~vi~gt~~ 91 (339)
T 1mzj_A 68 SRRALEHAGVDP-AEID----LVVVSTMT 91 (339)
T ss_dssp HHHHHHHHTCCG-GGCC----EEEEECSC
T ss_pred HHHHHHHcCCCH-HHCC----EEEEEecC
Confidence 999999999985 3222 68888764
No 29
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=96.94 E-value=0.00029 Score=48.48 Aligned_cols=80 Identities=20% Similarity=0.204 Sum_probs=48.2
Q ss_pred CCcEEEEecceeCCCCC-CHHHHHHHHHcCCCceeeCCCCC--cCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGT-TRQSAWNAIKEGKACVSPLSEPE--YSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSL 77 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~-~~~~~~~~l~~g~s~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al 77 (109)
|++++|+|+|+..|-.. +.+++++.+ . .+ +.+. ..++..+. .. ....+...|++
T Consensus 10 m~~~~I~g~g~~~P~~~~~~~~~~~~~-~-~~-----~~~i~~~~gi~~r~-----------~~-----~~~~~~~~la~ 66 (335)
T 1u6e_A 10 ARSVGLLSVGAYRPERVVTNDEICQHI-D-SS-----DEWIYTRTGIKTRR-----------FA-----ADDESAASMAT 66 (335)
T ss_dssp CSCEEEEEEEEECCSEEEEHHHHTTSS-S-CC-----HHHHHHHHCCSEEE-----------EC-----CTTCCHHHHHH
T ss_pred CCceEEEEEEEECCCceecHHHHHHHh-C-CC-----HHHHHHhcCCceEe-----------ec-----CCCCCHHHHHH
Confidence 67899999999999764 466665533 1 11 0000 00011000 00 01245789999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 78 IATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 78 ~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
.|+++||+++|+++ ++++ +|++|+++
T Consensus 67 ~A~~~al~~ag~~~-~~id----~vi~~t~~ 92 (335)
T 1u6e_A 67 EACRRALSNAGLSA-ADID----GVIVTTNT 92 (335)
T ss_dssp HHHHHHHHHHTCCG-GGCC----EEEEECSC
T ss_pred HHHHHHHHHcCCCH-HHCC----EEEEEcCC
Confidence 99999999999985 3222 78888764
No 30
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=96.34 E-value=0.00074 Score=47.58 Aligned_cols=96 Identities=11% Similarity=0.047 Sum_probs=51.5
Q ss_pred EEEEecceeCCCCC-CHHHHHHHHHcCCCceeeCCC--C-----CcCCCCcceee-ecCCCCcCCCCChHhhhcCCHHHH
Q psy5298 4 VVVTGLGIVSPVGT-TRQSAWNAIKEGKACVSPLSE--P-----EYSKLPCKIAA-RIEGLDLTAQFTQSKLRTMSRATA 74 (109)
Q Consensus 4 V~ItG~g~vs~lG~-~~~~~~~~l~~g~s~i~~~~~--~-----~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~ 74 (109)
+.|+|+|+..|-.. +.+++|+.+.... ...+. + ...++..++.. ..+.|+....+.++..........
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~---~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 86 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRH---TDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKS 86 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHH---TTCTTHHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhc---cChhhHHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHH
Confidence 68999999999763 6788887764331 00000 0 01122222111 111121111122233333456789
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCceEEEEeec
Q psy5298 75 FSLIATREALADAKWNPQNEKQKERTGVAVGTG 107 (109)
Q Consensus 75 ~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~ 107 (109)
|++.|+++||+++|+++ ++++ .++++++
T Consensus 87 la~~Aa~~aL~~agl~~-~~id----~vi~~t~ 114 (382)
T 1u0m_A 87 RVPAVIQRALDDAELLA-TDID----VIIYVSC 114 (382)
T ss_dssp HHHHHHHHHHHHHTCCG-GGCS----EEEEECS
T ss_pred HHHHHHHHHHHHhCCCH-HHCC----EEEEEec
Confidence 99999999999999975 2221 4556654
No 31
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=94.82 E-value=0.018 Score=39.61 Aligned_cols=78 Identities=18% Similarity=0.173 Sum_probs=46.1
Q ss_pred CcEEEEecceeCCCCC-CHHHHHHHHHcCCCceeeCCCCCcCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHHH
Q psy5298 2 KRVVVTGLGIVSPVGT-TRQSAWNAIKEGKACVSPLSEPEYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIAT 80 (109)
Q Consensus 2 ~~V~ItG~g~vs~lG~-~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a~ 80 (109)
.++.|+|+|+..|-.. +.+++++.+. .+ +++ +. ...| ........+ ++...|++.|+
T Consensus 4 m~~~I~g~g~~~P~~~~~~~~~~~~~~--~~-----~~~----i~-~~~G----i~~R~~~~~------~~~~~la~~Aa 61 (331)
T 2x3e_A 4 RAAVVCGLGSYLPEAVLSNDMLAAELD--TS-----DAW----IS-SRTG----VRQRHIAGD------LGSGDLALRAA 61 (331)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHTT--CC-----HHH----HH-HHHC----CCEEECCTT------CCHHHHHHHHH
T ss_pred ceeEEEEEEEECCCcEecHHHHHHHhC--CC-----HHH----HH-HhhC----ceEEEecCC------CCHHHHHHHHH
Confidence 5789999999999874 5666666542 11 000 00 0000 100111111 56789999999
Q ss_pred HHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 81 REALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 81 ~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++||+++|+ . + --.|++||++
T Consensus 62 ~~al~~ag~-~--~----id~vi~~t~~ 82 (331)
T 2x3e_A 62 SAALASAGL-E--R----VDAVVLATST 82 (331)
T ss_dssp HHHHHHHTC-S--C----CSEEEEECSS
T ss_pred HHHHHhCCc-c--c----CCEEEEEeCC
Confidence 999999998 2 1 2256777754
No 32
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=93.97 E-value=0.052 Score=36.66 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 70 SRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 70 ~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++...|++.|+++||+++|+++ ++.+ +|++|+++
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~-~~id----~v~~~~~~ 81 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSP-EELD----LIILATLT 81 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCG-GGCS----EEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHcCCCH-HHCC----EEEEEcCC
Confidence 4578999999999999999985 3222 78888764
No 33
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=93.64 E-value=0.096 Score=35.62 Aligned_cols=33 Identities=18% Similarity=0.148 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCce-EEEEeecC
Q psy5298 70 SRATAFSLIATREALADAKWNPQNEKQKERT-GVAVGTGM 108 (109)
Q Consensus 70 ~~~~~~al~a~~eAl~~agl~~~~~~~~~r~-gv~iGt~~ 108 (109)
.+...|++.|+++||+++|+++ +++ +|++|+++
T Consensus 48 ~~~~~la~~a~~~al~~ag~~~------~~id~vi~~~~~ 81 (322)
T 1ub7_A 48 EYTSDLAFKAVEDLLRRHPGAL------EGVDAVIVATNT 81 (322)
T ss_dssp CCHHHHHHHHHHHHHHHSTTTT------TTEEEEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHcCCCH------HHCCEEEEEcCC
Confidence 4578999999999999999975 344 57788764
No 34
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=93.43 E-value=0.075 Score=36.09 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 70 SRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 70 ~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
++...|++.|+++||+++|+++ ++.+ +|++|+++
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~-~~id----~vi~g~~~ 82 (317)
T 1hnj_A 49 ETVSTMGFEAATRAIEMAGIEK-DQIG----LIVVATTS 82 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCG-GGCC----EEEEECSC
T ss_pred CCHHHHHHHHHHHHHHHcCCCH-HHCC----EEEEEcCC
Confidence 4578999999999999999985 2221 67888764
No 35
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=93.01 E-value=0.096 Score=35.44 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 71 RATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 71 ~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
+...|++.|+++||+++|+++ +++ -+|++|+++
T Consensus 50 ~~~~l~~~a~~~al~~ag~~~-~~i----d~vi~~~~~ 82 (313)
T 1zow_A 50 DTSDLAYEASVKAIADAGIQP-EDI----DMIIVATAT 82 (313)
T ss_dssp CHHHHHHHHHHHHHHHHTCCG-GGC----CEEEEECSS
T ss_pred CHHHHHHHHHHHHHHHcCCCH-HHC----CEEEEEcCC
Confidence 467899999999999999975 222 268888764
No 36
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=92.96 E-value=0.11 Score=36.66 Aligned_cols=32 Identities=13% Similarity=0.020 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
..+|++.|+++||++||+++ ++++ +|++|+..
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~-~~id----~v~~g~~~ 57 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPK-EEVE----DVYAGCAN 57 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGCC----EEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCC----EEEEEecc
Confidence 46799999999999999986 3332 78888764
No 37
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=92.12 E-value=0.18 Score=35.49 Aligned_cols=31 Identities=23% Similarity=0.172 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCCCCCCce-EEEEeecC
Q psy5298 72 ATAFSLIATREALADA-KWNPQNEKQKERT-GVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~a-gl~~~~~~~~~r~-gv~iGt~~ 108 (109)
..+|++.++++||+|| |+++ +++ ++++|++.
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~------~~id~v~~g~~~ 62 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDP------GEVEDVIWGCVN 62 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCG------GGEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHhccCCCH------HHCCEEEEEeec
Confidence 5789999999999999 9875 233 78888754
No 38
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=91.95 E-value=0.15 Score=36.38 Aligned_cols=33 Identities=15% Similarity=0.265 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 71 RATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 71 ~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
....|++.|+++||++||+++ ++++ +|++|+.+
T Consensus 54 ~~~~L~~~Aa~~AL~dAgl~~-~~id----~v~~g~~~ 86 (418)
T 2iik_A 54 TPDELLSAVMTAVLKDVNLRP-EQLG----DICVGNVL 86 (418)
T ss_dssp CHHHHHHHHHHHHHHHHTCCG-GGCC----CEEEECSS
T ss_pred CHHHHHHHHHHHHHHHcCCCH-HHCC----EEEEEecC
Confidence 367899999999999999986 3333 68888754
No 39
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=91.95 E-value=0.18 Score=35.54 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
..+|++.++++||+|||+++ ++++ ++++|+..
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~-~~id----~v~~g~~~ 61 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAP-EDVS----EVIFGHVL 61 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGCC----EEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCC----EEEEEecC
Confidence 36899999999999999985 3332 57888654
No 40
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=91.51 E-value=0.17 Score=36.38 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|++.|+++||++||+++ ++++ +|++|+..
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~-~~Id----~vi~g~~~ 86 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNP-SEVG----DIVVGTVL 86 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGCC----CEEEECCS
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCC----EEEEEeec
Confidence 57899999999999999986 3333 58888764
No 41
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=90.07 E-value=0.27 Score=34.98 Aligned_cols=38 Identities=8% Similarity=-0.039 Sum_probs=27.6
Q ss_pred hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 66 LRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 66 ~~~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...+.....|+..|+++||+++|+++ +++ -.+++||++
T Consensus 119 ~~~~~~~~~La~~Aa~~AL~~agl~~-~~I----d~li~~t~~ 156 (413)
T 1xes_A 119 AMLAMEVPRLAKEAAEKAIQEWGQSK-SGI----THLIFCSTT 156 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCG-GGC----CEEEEEESC
T ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCH-HHC----CEEEEEEeC
Confidence 33445788999999999999999985 222 246667764
No 42
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=89.88 E-value=0.33 Score=34.25 Aligned_cols=32 Identities=16% Similarity=0.024 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHcC----CCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAK----WNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~ag----l~~~~~~~~~r~gv~iGt~~ 108 (109)
...|++.|+++||++|| +++ ++++ +|++|+..
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~-~~id----~v~~g~~~ 70 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADL-NLIE----EVACGNVL 70 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCG-GGCC----CEEEECSS
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCH-HHCC----EEEEEecC
Confidence 56899999999999999 985 3333 58888754
No 43
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=89.47 E-value=0.12 Score=36.43 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeec
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~ 107 (109)
..+|++.++++||+|||+++ ++++ ++++|+.
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~-~~id----~~~~g~~ 57 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAA-GEVN----EVILGQV 57 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGCC----EEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCC----EEEEEec
Confidence 56899999999999999985 3333 4555543
No 44
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=89.18 E-value=0.13 Score=36.26 Aligned_cols=31 Identities=26% Similarity=0.236 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeec
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTG 107 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~ 107 (109)
..+|++.++++||+|||+++ ++++ ++++|+.
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~-~~id----~~~~g~~ 62 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPK-EEVK----EAYMGNV 62 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGCC----EEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCC----EEEEEec
Confidence 57899999999999999985 3333 3555543
No 45
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=88.92 E-value=0.58 Score=32.93 Aligned_cols=32 Identities=28% Similarity=0.383 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++|+++ ++++ ++++|+.+
T Consensus 29 ~~~L~~~a~~~Al~~agi~~-~~Id----~v~~g~~~ 60 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNL-SEID----EVIIGNVL 60 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCG-GGCC----EEEEECCC
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCC----EEEEEecc
Confidence 45789999999999999986 3332 57777643
No 46
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=87.35 E-value=0.84 Score=32.10 Aligned_cols=32 Identities=19% Similarity=0.311 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++|+++ ++++ ++++|+.+
T Consensus 29 ~~~L~~~A~~~Al~~agl~~-~~Id----~v~~g~~~ 60 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEP-HEVD----EVILGHCI 60 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCG-GGCC----EEEEECSS
T ss_pred HHHHHHHHHHHHHHHcCCCH-hHCC----EEEEEEcc
Confidence 45789999999999999986 3332 57777653
No 47
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=87.31 E-value=0.44 Score=33.62 Aligned_cols=38 Identities=16% Similarity=0.089 Sum_probs=27.8
Q ss_pred hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 66 LRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 66 ~~~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...++....|+..|+++||+++|+++ + +--.++++|++
T Consensus 90 ~~~~~~~~~La~~Aa~~AL~~ag~~~-~----dId~li~~t~t 127 (387)
T 3oit_A 90 DIAADAVPELAAEAAKKAIAEWGRPA-A----DITHLVVTTNS 127 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCG-G----GCCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCH-H----HCCEEEEEeeC
Confidence 33445688999999999999999986 2 22356777664
No 48
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=87.02 E-value=0.88 Score=32.72 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEE-eecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAV-GTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~i-Gt~~ 108 (109)
...|+..|+++||+++|+++ ++++.++ ||++
T Consensus 52 ~~~La~~Aa~~aL~~agi~~------~~Id~li~~t~t 83 (450)
T 2f82_A 52 VISMSFNAVTSLLEKYKIDP------KQIGRLEVGSET 83 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCG------GGEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHcCcCH------HHCCEEEEEecC
Confidence 56899999999999999875 4666555 6553
No 49
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=86.65 E-value=0.86 Score=31.22 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++|+++ +++ -.+++|+++
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~-~~I----d~vi~~t~~ 89 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINP-QDI----ELIIVATTS 89 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCG-GGC----CEEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHC----CEEEEEeCC
Confidence 57899999999999999986 222 246777654
No 50
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=86.62 E-value=0.41 Score=33.84 Aligned_cols=39 Identities=10% Similarity=-0.003 Sum_probs=28.1
Q ss_pred HhhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCce-EEEEeecC
Q psy5298 64 SKLRTMSRATAFSLIATREALADAKWNPQNEKQKERT-GVAVGTGM 108 (109)
Q Consensus 64 ~~~~~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~-gv~iGt~~ 108 (109)
+..........|+..|+++||+++|+++ +++ .++++|++
T Consensus 107 r~~~~~~~~~~La~~Aa~~aL~~ag~~~------~~Id~vi~~t~~ 146 (406)
T 2d3m_A 107 RQDICVPGVPALGTEAAVKAIEEWGRPK------SEITHLVFCTSC 146 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCG------GGCCEEEEEESS
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCH------HHCCEEEEEecC
Confidence 3444456788999999999999999875 234 45666553
No 51
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=86.60 E-value=0.73 Score=32.38 Aligned_cols=32 Identities=19% Similarity=0.099 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADA-KWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~a-gl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++ |+++ ++++ ++++|+.+
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~-~~Id----~v~~g~~~ 59 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTA-ATLD----DIYWGCVQ 59 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCG-GGCC----EEEEECSC
T ss_pred HHHHHHHHHHHHHHhccCCCH-HHcC----EEEEEccc
Confidence 4678999999999999 9986 3222 57887653
No 52
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=86.57 E-value=0.81 Score=31.25 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++|+++ +++ -.+++||++
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~-~~I----d~li~~t~~ 83 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQA-SEI----DFILVATVT 83 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGC----CEEEEECSS
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHC----CEEEEEeCC
Confidence 67899999999999999986 222 256777654
No 53
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=85.92 E-value=0.96 Score=31.34 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++|+++ +++ -.+++||++
T Consensus 66 ~~~La~~Aa~~aL~~agi~~-~~I----d~vi~~t~~ 97 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQA-DSI----DALIFVSQT 97 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGC----CEEEEECSS
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHC----CEEEEEeCC
Confidence 56899999999999999986 222 256777654
No 54
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=85.91 E-value=0.92 Score=32.67 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceE-EEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTG-VAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~g-v~iGt~~ 108 (109)
..-|+..|+++||+++|+++ +.++ +++||.+
T Consensus 54 ~~~ma~~Aa~~al~~a~i~~------~~Id~ii~aT~t 85 (460)
T 2wya_A 54 INSLCLTVVQRLMERIQLPW------DSVGRLEVGTET 85 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCG------GGEEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCH------HHCCEEEEEeCC
Confidence 45699999999999999886 5676 4566654
No 55
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=85.64 E-value=0.83 Score=31.27 Aligned_cols=83 Identities=18% Similarity=0.169 Sum_probs=48.7
Q ss_pred cEEEEecceeCCCC-CCHHHHHHHHHcCCCceeeCCCCC--cCCCCcceeeecCCCCcCCCCChHhhhcCCHHHHHHHHH
Q psy5298 3 RVVVTGLGIVSPVG-TTRQSAWNAIKEGKACVSPLSEPE--YSKLPCKIAARIEGLDLTAQFTQSKLRTMSRATAFSLIA 79 (109)
Q Consensus 3 ~V~ItG~g~vs~lG-~~~~~~~~~l~~g~s~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~al~a 79 (109)
.|.|+|+|...|-- .+.+++++.+.+. ++...+++. ..++..+.. ..+ -.....|+..|
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~--~~~~~~~~i~~rtgi~~r~~-----------~~~-----~~~~~~la~~A 72 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQ--GIETSDEWIVARTGIHARYF-----------AEP-----DVTTSDLAFIA 72 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CCCCHHHHHHHHCCSEEEE-----------CCT-----TCCHHHHHHHH
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhccc--cCCCCHHHhHHhcCceEEEE-----------cCC-----CCCHHHHHHHH
Confidence 68999999999986 4788888887441 111101110 001111110 000 12367899999
Q ss_pred HHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 80 TREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 80 ~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
+++||+++|+++ +++ -.|++|+++
T Consensus 73 a~~al~~ag~~~-~~I----d~vi~~t~~ 96 (333)
T 4dfe_A 73 SQRAIEAADIDP-QSI----DLIIVATST 96 (333)
T ss_dssp HHHHHHHHTCCG-GGC----CEEEEECSS
T ss_pred HHHHHHHcCCCH-HHC----CEEEEEeCC
Confidence 999999999986 322 357777764
No 56
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=85.57 E-value=0.89 Score=31.89 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEE-EEeecC
Q psy5298 70 SRATAFSLIATREALADAKWNPQNEKQKERTGV-AVGTGM 108 (109)
Q Consensus 70 ~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv-~iGt~~ 108 (109)
.....|+..|+++||+++|+++ +++.. ++||++
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~------~~Id~vi~~t~~ 144 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRA------AEIGLLVLATST 144 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCG------GGEEEEEEEESS
T ss_pred hhHHHHHHHHHHHHHHHcCCCH------HHCCEEEEEEeC
Confidence 3578899999999999999875 45544 446653
No 57
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=85.42 E-value=0.62 Score=32.88 Aligned_cols=38 Identities=11% Similarity=-0.033 Sum_probs=27.8
Q ss_pred hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 66 LRTMSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 66 ~~~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
.........|+..|+++||+++|+++ ++ --.++++|++
T Consensus 96 ~~~~~~~~~La~~Aa~~aL~~ag~~~-~d----Id~vi~~t~t 133 (393)
T 3ov2_A 96 DIVVEEIPRLAKEAAEKAIKEWGRPK-SE----ITHLVFCSIS 133 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCG-GG----CCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCH-HH----CCEEEEEEeC
Confidence 33445678899999999999999986 22 2246777764
No 58
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=85.17 E-value=0.93 Score=31.14 Aligned_cols=31 Identities=29% Similarity=0.229 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceE-EEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTG-VAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~g-v~iGt~~ 108 (109)
..-|+..|+++||+++|+++ +.+. ++++|++
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~------~dId~li~~t~t 93 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQG------SDLDAVIVSTVT 93 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCG------GGCSEEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCH------HHCCEEEEEecc
Confidence 45699999999999999986 3444 4556554
No 59
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=85.13 E-value=1.2 Score=30.99 Aligned_cols=32 Identities=25% Similarity=0.226 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++|+++ +++ -.+++|+++
T Consensus 74 ~~~La~~Aa~~aL~~agl~~-~dI----d~vi~~t~~ 105 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLP-EDI----DLLLVNTLS 105 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCG-GGC----CEEEEECSS
T ss_pred HHHHHHHHHHHHHHhcCCCH-HHC----CEEEEEeCC
Confidence 46899999999999999986 222 256777654
No 60
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=84.68 E-value=0.58 Score=32.80 Aligned_cols=39 Identities=8% Similarity=-0.049 Sum_probs=27.9
Q ss_pred HhhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCce-EEEEeecC
Q psy5298 64 SKLRTMSRATAFSLIATREALADAKWNPQNEKQKERT-GVAVGTGM 108 (109)
Q Consensus 64 ~~~~~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~-gv~iGt~~ 108 (109)
+....+.....|+..|+++||+++|+++ +++ .++++|++
T Consensus 90 r~~~~~~~~~~La~~Aa~~aL~~ag~~~------~~Id~li~~t~~ 129 (387)
T 3a5r_A 90 RHKMQVKGVAELGKEAALKAIKEWGQPK------SKITHLIVCCLA 129 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCG------GGCCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEEEecC
Confidence 3344456678999999999999999875 233 35666653
No 61
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=84.66 E-value=1.1 Score=31.52 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++|+++ +++ -++++|+.+
T Consensus 31 ~~~L~~~A~~~AL~~agl~~-~dI----d~vi~g~~~ 62 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITP-DMI----DESLLGGVL 62 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCG-GGC----CEEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHC----CEEEEEeec
Confidence 56789999999999999986 322 357887653
No 62
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=84.25 E-value=0.67 Score=32.71 Aligned_cols=37 Identities=8% Similarity=-0.005 Sum_probs=26.6
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceE-EEEeec
Q psy5298 65 KLRTMSRATAFSLIATREALADAKWNPQNEKQKERTG-VAVGTG 107 (109)
Q Consensus 65 ~~~~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~g-v~iGt~ 107 (109)
..........|+..|+++||+++|+++ +++. ++++|+
T Consensus 100 ~~~~~~~~~~La~~Aa~~aL~~agl~~------~~Id~vi~~t~ 137 (402)
T 1ee0_A 100 QDLVVTGVPMLGKEAAVKAIDEWGLPK------SKITHLIFCTT 137 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCG------GGCCEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEEEec
Confidence 334445678899999999999999875 3343 555554
No 63
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=83.82 E-value=0.67 Score=32.52 Aligned_cols=39 Identities=10% Similarity=-0.015 Sum_probs=27.9
Q ss_pred HhhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCce-EEEEeecC
Q psy5298 64 SKLRTMSRATAFSLIATREALADAKWNPQNEKQKERT-GVAVGTGM 108 (109)
Q Consensus 64 ~~~~~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~-gv~iGt~~ 108 (109)
+..........|+..|+++||+++|+++ +++ .++++|++
T Consensus 94 r~~~~~~~~~~La~~Aa~~aL~~agl~~------~~Id~li~~t~~ 133 (389)
T 1i88_A 94 RQDMVVVEVPRLGKEAAVKAIKEWGQPK------SKITHLIVCTTS 133 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCG------GGCCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEEEECC
Confidence 3334445678899999999999999985 233 46666654
No 64
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=83.36 E-value=1.7 Score=30.67 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCce-EEEEeecC
Q psy5298 70 SRATAFSLIATREALADAKWNPQNEKQKERT-GVAVGTGM 108 (109)
Q Consensus 70 ~~~~~~al~a~~eAl~~agl~~~~~~~~~r~-gv~iGt~~ 108 (109)
.....|+..|+++||+++|+++ +.+ .|+++|++
T Consensus 115 ~~~~~La~~Aa~~AL~~agi~~------~dId~vi~~t~t 148 (392)
T 3led_A 115 SILAEMAVTAAEQAIERWGKPR------ERIGAVLCACSN 148 (392)
T ss_dssp CHHHHHHHHHHHHHHHHHCSCG------GGEEEEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHcCCCH------HHCCEEEEEecC
Confidence 3467899999999999999985 334 46666653
No 65
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=81.56 E-value=1.5 Score=31.35 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 71 RATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 71 ~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
....|+..|+++||+++|+++ + +--.|+++|++
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~-~----dId~li~~t~t 168 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDV-A----DVDCLITSNST 168 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCG-G----GCCEEEEECCS
T ss_pred CHHHHHHHHHHHHHHHhCcCH-H----HCCEEEEEccC
Confidence 467799999999999999986 2 23356777764
No 66
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=81.43 E-value=1.3 Score=31.39 Aligned_cols=31 Identities=6% Similarity=-0.004 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCCCCCCceEEEEeec
Q psy5298 72 ATAFSLIATREALAD-AKWNPQNEKQKERTGVAVGTG 107 (109)
Q Consensus 72 ~~~~al~a~~eAl~~-agl~~~~~~~~~r~gv~iGt~ 107 (109)
...|+..|+++||++ +|+++ ++ --++++|+.
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~-~d----Id~vi~g~~ 63 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDE-TL----ISDMILGVV 63 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCG-GG----EEEEEEECC
T ss_pred HHHHHHHHHHHHHhhhcCcCH-HH----CCEEEEEec
Confidence 567899999999999 99986 22 225677754
No 67
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=80.82 E-value=1.5 Score=30.13 Aligned_cols=81 Identities=17% Similarity=0.154 Sum_probs=46.8
Q ss_pred CcEEEEecceeCCCCC-CHHHHHHHHHc-----CCCceeeCCCC--CcCCCCcceeeecCCCCcCCCCChHhhhcCCHHH
Q psy5298 2 KRVVVTGLGIVSPVGT-TRQSAWNAIKE-----GKACVSPLSEP--EYSKLPCKIAARIEGLDLTAQFTQSKLRTMSRAT 73 (109)
Q Consensus 2 ~~V~ItG~g~vs~lG~-~~~~~~~~l~~-----g~s~i~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 73 (109)
+.|.|+|+|...|--. +.+++.+.+.. +.+ +++ ...++..++.. ++ -....
T Consensus 11 ~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~-----~~~i~~~tGi~~R~~~-----~~-----------~~~~~ 69 (345)
T 3s21_A 11 QNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIK-----TDVLGDVAGIHARRLW-----DQ-----------DVQAS 69 (345)
T ss_dssp SSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCC-----CCHHHHTTCCSEEEEC-----SS-----------CCCHH
T ss_pred cceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCC-----HHHHHHhhCceeEEEC-----CC-----------CCCHH
Confidence 5699999999999753 56666655421 211 111 01122222111 00 01257
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 74 AFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 74 ~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
.|+..|+++||+++|+++ ++++ .|++|+++
T Consensus 70 ~La~~Aa~~al~~ag~~~-~~Id----~vi~~t~~ 99 (345)
T 3s21_A 70 DAATQAARKALIDANIGI-EKIG----LLINTSVS 99 (345)
T ss_dssp HHHHHHHHHHHHHHTCCG-GGCC----EEEECCSC
T ss_pred HHHHHHHHHHHHHcCCCH-HHCC----EEEEEeCC
Confidence 899999999999999986 3222 46777653
No 68
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=80.81 E-value=0.99 Score=32.01 Aligned_cols=35 Identities=9% Similarity=0.094 Sum_probs=25.9
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCce-EEEEeecC
Q psy5298 68 TMSRATAFSLIATREALADAKWNPQNEKQKERT-GVAVGTGM 108 (109)
Q Consensus 68 ~~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~-gv~iGt~~ 108 (109)
.......|+..|+++||+++|+++ +++ .++++|++
T Consensus 116 ~~~~~~~La~~Aa~~aL~~agl~~------~dId~li~~t~~ 151 (413)
T 2p0u_A 116 AVAQVPKLAKEASMNAIKEWGRPK------SEITHIVMATTS 151 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCG------GGCCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCH------HHCCEEEEEecC
Confidence 335678899999999999999875 233 46666653
No 69
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=79.11 E-value=1.2 Score=31.40 Aligned_cols=34 Identities=9% Similarity=-0.007 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCCCCCce-EEEEeecC
Q psy5298 69 MSRATAFSLIATREALADAKWNPQNEKQKERT-GVAVGTGM 108 (109)
Q Consensus 69 ~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~-gv~iGt~~ 108 (109)
......|+..|+++||+++|+++ +++ .++++|++
T Consensus 112 ~~~~~~La~~Aa~~aL~~agl~~------~~Id~vi~~t~~ 146 (402)
T 3awk_A 112 VLEVPKLAKEAAISAIKQWGQPK------SKITHLVFATTS 146 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCG------GGCCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEEEEeC
Confidence 35678899999999999999985 233 36667653
No 70
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=78.56 E-value=1.9 Score=30.22 Aligned_cols=20 Identities=15% Similarity=0.096 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHcCCCC
Q psy5298 72 ATAFSLIATREALADAKWNP 91 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~ 91 (109)
...|+..|+++||++||+++
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~ 74 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKK 74 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCG
T ss_pred HHHHHHHHHHHHHHHcCCCH
Confidence 35689999999999999986
No 71
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=78.03 E-value=3.4 Score=30.02 Aligned_cols=31 Identities=13% Similarity=0.280 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceE-EEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTG-VAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~g-v~iGt~~ 108 (109)
...|+..|+++||+++|+++ +.++ +++||++
T Consensus 73 ~~~La~~Aa~~aL~~agi~~------~dId~li~~T~t 104 (478)
T 2p8u_A 73 INSLCMTVVQNLMERNNLSY------DCIGRLEVGTET 104 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCG------GGEEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCH------HHCCEEEEEccC
Confidence 56899999999999999875 4555 4555543
No 72
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=77.11 E-value=3.7 Score=28.47 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceE-EEEeec
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTG-VAVGTG 107 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~g-v~iGt~ 107 (109)
...|+..|+++||+++|+++ +.+. |+++|+
T Consensus 54 ~~~La~~Aa~~aL~~ag~~~------~dId~vi~~t~ 84 (357)
T 3s3l_A 54 PPRMAARAARAALGRGDVDP------ADVSLVLHSSL 84 (357)
T ss_dssp HHHHHHHHHHHHHHHTTCCG------GGEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCH------HHCCEEEEEec
Confidence 57899999999999999875 3443 555554
No 73
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=76.17 E-value=2.4 Score=29.72 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 70 SRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 70 ~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
.....|+..|+++||+++|+++ ++ --.++++|++
T Consensus 79 ~~~~~La~~Aa~~aL~~ag~~~-~d----Id~li~~t~t 112 (379)
T 3euo_A 79 SDGVPLAVEASRKAMAEARLVP-AQ----ITHMVSTTCT 112 (379)
T ss_dssp HHTHHHHHHHHHHHHHHHTCCG-GG----CCEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHcCCCH-HH----CCEEEEEecC
Confidence 3467899999999999999986 22 2246777654
No 74
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=75.61 E-value=2.7 Score=29.26 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++|+++ +++ -.+++++++
T Consensus 80 ~~~La~~Aa~~aL~~ag~~~-~~I----d~vi~~t~~ 111 (365)
T 3gwa_A 80 AADLAYEAARKLFAQGAVGA-DQV----DFVILCTQA 111 (365)
T ss_dssp HHHHHHHHHHHHHHTTSCCG-GGC----CEEEEEESS
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHC----CEEEEEeCC
Confidence 56899999999999999986 222 246777653
No 75
>3s0r_A De novo designed helical assembly; interacts with single walled nanotube (SWNT), de novo protei; 2.45A {Artificial gene}
Probab=75.58 E-value=2.9 Score=17.86 Aligned_cols=13 Identities=38% Similarity=0.539 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHH
Q psy5298 73 TAFSLIATREALA 85 (109)
Q Consensus 73 ~~~al~a~~eAl~ 85 (109)
.++++.++++||+
T Consensus 17 aqlalqaarqalk 29 (30)
T 3s0r_A 17 AQLALQAARQALK 29 (30)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 5788888888875
No 76
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=74.34 E-value=4.2 Score=29.53 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceE-EEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTG-VAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~g-v~iGt~~ 108 (109)
..-|+..|+++||+++|+++ +.++ +++||.+
T Consensus 54 ~~~La~~Aa~~AL~~agi~~------~dId~IivaT~t 85 (460)
T 2v4w_A 54 INSLCLTVVQRLMERIQLPW------DSVGRLEVGTET 85 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCG------GGEEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCH------HHCCEEEEEecC
Confidence 46799999999999999875 4554 4566643
No 77
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=71.34 E-value=3.6 Score=29.85 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~ 108 (109)
...|+..|+++||+++|+++ + +--.|+++|++
T Consensus 110 a~~La~~Aa~~AL~~agi~~-~----dId~li~~t~t 141 (465)
T 3e1h_A 110 GVPLAVEASRKAMAEARLVP-A----QITHMVSTTCT 141 (465)
T ss_dssp THHHHHHHHHHHHHHHTCCG-G----GCCEEEEECSS
T ss_pred HHHHHHHHHHHHHHHcCCCH-H----HCCEEEEEeeC
Confidence 45899999999999999986 2 22245666653
No 78
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=44.22 E-value=5.4 Score=29.25 Aligned_cols=19 Identities=21% Similarity=0.237 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHcCCCC
Q psy5298 73 TAFSLIATREALADAKWNP 91 (109)
Q Consensus 73 ~~~al~a~~eAl~~agl~~ 91 (109)
..|+..|+++||+|||+++
T Consensus 43 ~dL~a~Ai~~AL~dAGl~p 61 (520)
T 4egv_A 43 VELATEAAKAALHDCGADA 61 (520)
T ss_dssp HHHHHHHHHHHHHHTSSCH
T ss_pred HHHHHHHHHHHHHHhCcCH
Confidence 4578889999999999986
No 79
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=43.28 E-value=23 Score=22.95 Aligned_cols=24 Identities=29% Similarity=0.518 Sum_probs=14.5
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHH
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAI 26 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l 26 (109)
|++|.|||++=--..-.|+ .|+.+
T Consensus 2 MktVLvTGF~PF~~~~~NP--S~~~v 25 (216)
T 4gxh_A 2 MKTILVTAFDPFGGEAINP--SWEAI 25 (216)
T ss_dssp -CEEEEEEECCCTTSSSCH--HHHHH
T ss_pred CCEEEEeeccCCCCCCCCh--hHHHH
Confidence 8899999998543333455 44443
No 80
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=41.28 E-value=31 Score=22.37 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=19.1
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCC
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGK 30 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~ 30 (109)
|++|.|||++=--..-.|+....-..+.+.
T Consensus 1 mk~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 30 (220)
T 1a2z_A 1 MKKVLITGFEPFGGDSKNPTEQIAKYFDRK 30 (220)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHHTTC
T ss_pred CCEEEEeeccCCCCCCCCcHHHHHHHhhcc
Confidence 788999999765444456554444444554
No 81
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=39.12 E-value=32 Score=22.41 Aligned_cols=29 Identities=17% Similarity=0.102 Sum_probs=16.1
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcC
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEG 29 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g 29 (109)
|++|+|||++=.-..-.|+....-..+.+
T Consensus 2 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~ 30 (223)
T 3ro0_A 2 EKKVLLTGFDPFGGETVNPSWEAVKRLNG 30 (223)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHTTT
T ss_pred CCEEEEEeCCCCCCCCCChHHHHHHHhcc
Confidence 78999999983322223654333333444
No 82
>1n13_A PVLARGDC, pyruvoyl-dependent arginine decarboxylase beta chain; pyruvoyl group, pyruvate, agmatine, lyase; 1.40A {Methanocaldococcus jannaschii} SCOP: d.155.1.2 PDB: 1mt1_A 2qqc_A 2qqd_A
Probab=36.57 E-value=23 Score=17.71 Aligned_cols=13 Identities=31% Similarity=0.095 Sum_probs=10.9
Q ss_pred HHHHHHHHHcCCC
Q psy5298 78 IATREALADAKWN 90 (109)
Q Consensus 78 ~a~~eAl~~agl~ 90 (109)
.+-+.||.|||+.
T Consensus 32 ~sFd~AL~dAgI~ 44 (52)
T 1n13_A 32 NAFDGALLNAGIG 44 (52)
T ss_dssp HHHHHHHHHHTCT
T ss_pred HHHHHHHHHCCCc
Confidence 4668999999986
No 83
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=34.71 E-value=33 Score=22.15 Aligned_cols=10 Identities=50% Similarity=0.850 Sum_probs=9.5
Q ss_pred CCcEEEEecc
Q psy5298 1 MKRVVVTGLG 10 (109)
Q Consensus 1 ~~~V~ItG~g 10 (109)
|++|+|||++
T Consensus 1 m~~VLvTGF~ 10 (215)
T 3lac_A 1 MKTVLLTGFD 10 (215)
T ss_dssp CEEEEEEEEC
T ss_pred CCEEEEEecC
Confidence 8899999998
No 84
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=30.05 E-value=45 Score=21.79 Aligned_cols=10 Identities=40% Similarity=0.690 Sum_probs=9.3
Q ss_pred CCcEEEEecc
Q psy5298 1 MKRVVVTGLG 10 (109)
Q Consensus 1 ~~~V~ItG~g 10 (109)
|++|.|||++
T Consensus 23 mk~VLvTGF~ 32 (228)
T 4hps_A 23 MKTILVTAFD 32 (228)
T ss_dssp CEEEEEEEEC
T ss_pred CCEEEEEecc
Confidence 7899999998
No 85
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=29.38 E-value=63 Score=21.20 Aligned_cols=34 Identities=18% Similarity=0.115 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCCCCCceEEEEeecCC
Q psy5298 69 MSRATAFSLIATREALADAKWNPQNEKQKERTGVAVGTGMI 109 (109)
Q Consensus 69 ~~~~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~iGt~~~ 109 (109)
|+...+-...++.|.++.+.+.+ ..+ +++|+|+|
T Consensus 40 m~~i~~~~~~~l~Ell~~a~l~~------G~i-fVvGcSTS 73 (235)
T 1v8d_A 40 MEGIRRAAQRAAEEFLQAFPMAP------GSL-FVLGGSTS 73 (235)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCT------TCE-EEEEECHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC------CCE-EEEeeeHH
Confidence 33344555677889899998874 233 68888764
No 86
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=28.39 E-value=30 Score=23.50 Aligned_cols=29 Identities=34% Similarity=0.518 Sum_probs=20.0
Q ss_pred CCcEEEEecceeCCCCCC-HHHHHHHHHcCC
Q psy5298 1 MKRVVVTGLGIVSPVGTT-RQSAWNAIKEGK 30 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~-~~~~~~~l~~g~ 30 (109)
|+=|.||| |++|++|.+ ..+..-.|++.+
T Consensus 23 mKyIfVTG-GVvSglGKGi~aaSlG~LLk~r 52 (294)
T 2c5m_A 23 MKYILVTG-GVISGIGKGIIASSVGTILKSC 52 (294)
T ss_dssp CEEEEEEE-CSSTTSCHHHHHHHHHHHHHTT
T ss_pred eEEEEEcC-ccccccchHHHHHHHHHHHHHC
Confidence 44578888 699999998 444455555544
No 87
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=28.09 E-value=22 Score=24.25 Aligned_cols=29 Identities=34% Similarity=0.518 Sum_probs=19.5
Q ss_pred CCcEEEEecceeCCCCCC-HHHHHHHHHcCC
Q psy5298 1 MKRVVVTGLGIVSPVGTT-RQSAWNAIKEGK 30 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~-~~~~~~~l~~g~ 30 (109)
|+=|.||| |++|++|.+ ..+..-.|++.+
T Consensus 23 ~KyIfVTG-GVvS~lGKGi~aaSlg~lLk~~ 52 (295)
T 2vo1_A 23 MKYILVTG-GVISGIGKGIIASSVGTILKSC 52 (295)
T ss_dssp CEEEEEEE-CSSSSSSHHHHHHHHHHHHHHT
T ss_pred ceEEEEcC-CcccccccHHHHHHHHHHHHHC
Confidence 34478888 899999998 344455555443
No 88
>4ayb_Q DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_J 4b1o_Q 4b1p_J 2y0s_J 2waq_Q
Probab=24.64 E-value=33 Score=19.17 Aligned_cols=15 Identities=27% Similarity=0.669 Sum_probs=11.8
Q ss_pred HHHHHHHHcCCCcee
Q psy5298 20 QSAWNAIKEGKACVS 34 (109)
Q Consensus 20 ~~~~~~l~~g~s~i~ 34 (109)
.++|++|++|+=.|.
T Consensus 48 TEIWd~Ll~gkISIe 62 (104)
T 4ayb_Q 48 TEIWDNLLNGKISVD 62 (104)
T ss_dssp HHHHHHHHHCCSCHH
T ss_pred hHHHHHHHcCcccHH
Confidence 478999999986554
No 89
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=24.26 E-value=35 Score=19.55 Aligned_cols=12 Identities=17% Similarity=0.124 Sum_probs=9.1
Q ss_pred CCcEEEEeccee
Q psy5298 1 MKRVVVTGLGIV 12 (109)
Q Consensus 1 ~~~V~ItG~g~v 12 (109)
|++|+|+|.|-+
T Consensus 6 ~~~v~I~G~G~i 17 (141)
T 3llv_A 6 RYEYIVIGSEAA 17 (141)
T ss_dssp CCSEEEECCSHH
T ss_pred CCEEEEECCCHH
Confidence 467999998753
No 90
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=24.05 E-value=72 Score=19.83 Aligned_cols=25 Identities=20% Similarity=0.453 Sum_probs=19.8
Q ss_pred CcEEEEecceeCCCCCCHHHHHHHHHcCCC
Q psy5298 2 KRVVVTGLGIVSPVGTTRQSAWNAIKEGKA 31 (109)
Q Consensus 2 ~~V~ItG~g~vs~lG~~~~~~~~~l~~g~s 31 (109)
|.|+|+| |-|.++.++.+.|++..+
T Consensus 2 RpIVi~G-----PSG~GK~Tl~~~L~~~~~ 26 (186)
T 1ex7_A 2 RPIVISG-----PSGTGKSTLLKKLFAEYP 26 (186)
T ss_dssp CCEEEEC-----CTTSSHHHHHHHHHHHCT
T ss_pred CEEEEEC-----CCCCCHHHHHHHHHHhCC
Confidence 5677777 667899999999987654
No 91
>2cx6_A Hypothetical protein YHCO; barstar, ribonuclease inhibitor, RSGI, structural genomics; 2.43A {Escherichia coli} SCOP: c.9.1.1
Probab=22.49 E-value=54 Score=17.92 Aligned_cols=15 Identities=13% Similarity=0.299 Sum_probs=13.0
Q ss_pred CCCCHHHHHHHHHcC
Q psy5298 15 VGTTRQSAWNAIKEG 29 (109)
Q Consensus 15 lG~~~~~~~~~l~~g 29 (109)
.|.|.+++|+.|..+
T Consensus 31 fG~NlDAL~D~Lt~~ 45 (90)
T 2cx6_A 31 KVRDLDSLWDVLMND 45 (90)
T ss_dssp SCSSHHHHHHHHHTT
T ss_pred hCCCHHHHHHHHccC
Confidence 489999999999853
No 92
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=22.11 E-value=28 Score=24.54 Aligned_cols=25 Identities=28% Similarity=0.207 Sum_probs=14.4
Q ss_pred CCcEEEEecceeCCCCCCHHHHHHHHHcCC
Q psy5298 1 MKRVVVTGLGIVSPVGTTRQSAWNAIKEGK 30 (109)
Q Consensus 1 ~~~V~ItG~g~vs~lG~~~~~~~~~l~~g~ 30 (109)
|++|+|+|-|+- +...-+....+|.
T Consensus 1 Mk~VvVIGaG~~-----GL~aA~~La~~G~ 25 (501)
T 4dgk_A 1 MKPTTVIGAGFG-----GLALAIRLQAAGI 25 (501)
T ss_dssp CCCEEEECCHHH-----HHHHHHHHHHTTC
T ss_pred CCCEEEECCcHH-----HHHHHHHHHHCCC
Confidence 788888877653 3333344444454
No 93
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=20.87 E-value=35 Score=19.23 Aligned_cols=12 Identities=42% Similarity=0.567 Sum_probs=8.7
Q ss_pred CCcEEEEeccee
Q psy5298 1 MKRVVVTGLGIV 12 (109)
Q Consensus 1 ~~~V~ItG~g~v 12 (109)
|++|.|+|.|.+
T Consensus 6 ~~~v~I~G~G~i 17 (144)
T 2hmt_A 6 NKQFAVIGLGRF 17 (144)
T ss_dssp CCSEEEECCSHH
T ss_pred CCcEEEECCCHH
Confidence 457999997654
No 94
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=20.26 E-value=16 Score=25.65 Aligned_cols=29 Identities=21% Similarity=0.357 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCceEEE-EeecC
Q psy5298 72 ATAFSLIATREALADAKWNPQNEKQKERTGVA-VGTGM 108 (109)
Q Consensus 72 ~~~~al~a~~eAl~~agl~~~~~~~~~r~gv~-iGt~~ 108 (109)
...|+..|+++||++ ++ +++++.+ +||++
T Consensus 51 ~~~la~~Aa~~aL~~--~~------~~~Id~li~~t~~ 80 (396)
T 1xpm_A 51 IVSMGANAAKDIITD--ED------KKKIGMVIVATES 80 (396)
T ss_dssp HHHHHHHHHHTTCCH--HH------HHHEEEEEEECSS
T ss_pred HHHHHHHHHHHHHhc--CC------HHHCCEEEEEeCC
Confidence 578999999999987 43 3567654 46654
Done!