RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy5299
         (75 letters)



>g1qd6.1 f.4.2.1 (A:,C:) Outer membrane phospholipase A (OMPLA)
           {Escherichia coli [TaxId: 562]}
          Length = 253

 Score = 24.0 bits (52), Expect = 2.2
 Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)

Query: 27  NHE-NGRSEPKEKTRNR 42
           NH+ NGRS+P  ++ NR
Sbjct: 125 NHDSNGRSDPTSRSWNR 141


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.134    0.408 

Gapped
Lambda     K      H
   0.267   0.0654    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 268,536
Number of extensions: 9157
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 75
Length of database: 2,407,596
Length adjustment: 42
Effective length of query: 33
Effective length of database: 1,830,936
Effective search space: 60420888
Effective search space used: 60420888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.0 bits)