Query psy5300
Match_columns 177
No_of_seqs 121 out of 1524
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 23:03:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 1.5E-27 5.1E-32 197.0 16.4 141 32-176 30-174 (510)
2 1u19_A Rhodopsin; G protein-co 99.9 3.7E-26 1.3E-30 178.6 18.8 138 32-176 36-174 (349)
3 2ks9_A Substance-P receptor; w 99.9 4.3E-26 1.5E-30 179.6 19.2 135 35-176 33-167 (364)
4 3uon_A Human M2 muscarinic ace 99.9 9.1E-26 3.1E-30 182.8 14.9 138 32-176 21-160 (467)
5 2rh1_A Beta-2-adrenergic recep 99.9 1.3E-25 4.4E-30 184.7 15.3 137 31-174 37-175 (500)
6 2lnl_A C-X-C chemokine recepto 99.9 3.9E-25 1.3E-29 170.1 15.8 135 33-176 10-145 (296)
7 4dkl_A MU-type opioid receptor 99.9 1.9E-25 6.5E-30 180.7 13.8 141 28-176 11-153 (464)
8 3eml_A Human adenosine A2A rec 99.9 9.8E-25 3.4E-29 177.5 15.2 136 32-176 19-156 (488)
9 3vw7_A Proteinase-activated re 99.9 6E-25 2.1E-29 178.9 13.8 139 30-176 16-157 (484)
10 3v2y_A Sphingosine 1-phosphate 99.9 3E-25 1E-29 183.5 12.0 133 35-176 64-198 (520)
11 3odu_A C-X-C chemokine recepto 99.9 5.5E-25 1.9E-29 179.9 13.4 138 30-176 44-183 (502)
12 3pbl_A D(3) dopamine receptor, 99.9 2.7E-25 9.2E-30 180.8 11.3 137 33-176 37-179 (481)
13 2z73_A Rhodopsin; visual pigme 99.9 2.5E-24 8.5E-29 174.4 16.7 137 33-176 33-172 (448)
14 4ea3_A Fusion protein of nocic 99.9 1.7E-24 5.7E-29 175.1 13.7 137 31-175 122-260 (434)
15 3rze_A Histamine H1 receptor, 99.9 9E-25 3.1E-29 176.3 12.1 134 35-175 9-144 (452)
16 4eiy_A Adenosine receptor A2A/ 99.9 2.6E-24 9E-29 173.4 14.1 137 31-176 28-166 (447)
17 4amj_A Beta-1 adrenergic recep 99.9 8.1E-25 2.8E-29 168.5 10.1 137 32-175 9-147 (315)
18 3sn6_R Lysozyme, beta-2 adrene 99.9 7.4E-24 2.5E-28 174.7 11.9 137 32-175 180-318 (514)
19 1hll_A Alpha-2A adrenergic rec 98.4 6.9E-08 2.3E-12 49.1 1.7 22 127-148 2-23 (32)
20 2lot_A Apelin receptor; membra 96.5 6.9E-05 2.4E-09 43.9 -3.5 31 36-66 30-60 (64)
21 2ks9_A Substance-P receptor; w 31.3 92 0.0031 23.1 5.5 18 40-57 41-58 (364)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.95 E-value=1.5e-27 Score=196.96 Aligned_cols=141 Identities=23% Similarity=0.401 Sum_probs=123.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHcc--ccccc
Q psy5300 32 SSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYT--VEWLW 109 (177)
Q Consensus 32 ~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~--~~~~~ 109 (177)
..+....++|.+++++|++||+++++++.+++++| +.+++.|+|+.|||++|++.+++.+|+.+..... +.|.+
T Consensus 30 ~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r----~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~ 105 (510)
T 4grv_A 30 YSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQ----SLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAF 105 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCC----CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEh
Confidence 35667788899999999999999999999887665 1227899999999999999999999988877653 46999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 110 GNMSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 110 ~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
|+..|++..++...+..+|++++++||+|||+||++|++ ...+++++..+++++|++++++++|+++
T Consensus 106 g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 174 (510)
T 4grv_A 106 GDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLF 174 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999997 5689999999999999999999999864
No 2
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.95 E-value=3.7e-26 Score=178.60 Aligned_cols=138 Identities=23% Similarity=0.339 Sum_probs=126.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHccccccccc
Q psy5300 32 SSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWGN 111 (177)
Q Consensus 32 ~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~~ 111 (177)
........++.+++++|++||+++++++.+++++| ++.|+++.|||++|++.++...|........+.|..++
T Consensus 36 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~-------~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~ 108 (349)
T 1u19_A 36 WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLR-------TPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGP 108 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCC-------SHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhc-------CchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCCh
Confidence 34566778889999999999999999999999988 99999999999999999998888888777777899999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc-cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 112 MSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK-SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 112 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~-~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
..|++..++...+..+|+++++++|+|||+||++|++ +..+++++...++++|+++++.++|+++
T Consensus 109 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~ 174 (349)
T 1u19_A 109 TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLV 174 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCccceeeccchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 4478888999999999999999999864
No 3
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.95 E-value=4.3e-26 Score=179.65 Aligned_cols=135 Identities=21% Similarity=0.405 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHcccccccccchh
Q psy5300 35 SSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWGNMSC 114 (177)
Q Consensus 35 ~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~~~~C 114 (177)
....+++.+++++|++||+++++++.+++++| ++.|+++.|||++|++.++...|........+.|..++..|
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~-------~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C 105 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMR-------TVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYC 105 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCC-------CHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHH
Confidence 44577899999999999999999999999998 99999999999999999988888887777777899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCccccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 115 KLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMKSISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 115 ~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
++..++...+..+|+++++++|+|||+||++|+++..+++++..+++++|+++++.++|+++
T Consensus 106 ~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~i~~~W~~s~~~~~p~~~ 167 (364)
T 2ks9_A 106 KFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGY 167 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999997788899999999999999999998764
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.93 E-value=9.1e-26 Score=182.83 Aligned_cols=138 Identities=24% Similarity=0.418 Sum_probs=128.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHccccccccc
Q psy5300 32 SSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWGN 111 (177)
Q Consensus 32 ~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~~ 111 (177)
.......+++.+++++|++||+++++++.+++++| ++.|+|+.|||++|++.+++..|..+.....+.|..+.
T Consensus 21 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~-------~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~ 93 (467)
T 3uon_A 21 FEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQ-------TVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGP 93 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC-------SHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccC-------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCc
Confidence 44567888899999999999999999999999998 99999999999999999999999988888888999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 112 MSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 112 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
..|++..++...+..+|++++++||+|||+||++|++ ...+++++..+++++|++++++++|+++
T Consensus 94 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~ 160 (467)
T 3uon_A 94 VVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAIL 160 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 5678999999999999999999988753
No 5
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.93 E-value=1.3e-25 Score=184.73 Aligned_cols=137 Identities=24% Similarity=0.406 Sum_probs=125.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHcccccccc
Q psy5300 31 TSSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWG 110 (177)
Q Consensus 31 ~~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~ 110 (177)
........+++.+++++|++||+++++++.+++++| ++.|+|+.|||++|++.++..+|+.+.....+.|.++
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~-------~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~ 109 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQ-------TVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFG 109 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC-------SHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccC-------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 344566778899999999999999999999999998 9999999999999999999999998888887899999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCc
Q psy5300 111 NMSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQ 174 (177)
Q Consensus 111 ~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~ 174 (177)
...|++..++..++..+|++++++||+|||+||++|++ ...+++++..+++++|+++++.+++|
T Consensus 110 ~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p 175 (500)
T 2rh1_A 110 NFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLP 175 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999997 45789999999999999999988544
No 6
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.93 E-value=3.9e-25 Score=170.06 Aligned_cols=135 Identities=27% Similarity=0.426 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHcccccccccc
Q psy5300 33 SASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWGNM 112 (177)
Q Consensus 33 ~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~~~ 112 (177)
.+....++|.+++++|++||+++++++.++|++| +++|+++.|||++|++.++ ..|+...... ++|..|+.
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lr-------t~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~ 80 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGR-------SVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTF 80 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCC-------STTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-------ChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchh
Confidence 4566778899999999999999999999999999 9999999999999999876 4666655544 57999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc-cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 113 SCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK-SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 113 ~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~-~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
.|+...+....+..+|+++++++|+|||.|+++|++ +...+++...+++++|+.+++.++|+..
T Consensus 81 ~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~~~~W~~s~~~~~p~~~ 145 (296)
T 2lnl_A 81 LCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFL 145 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhhhhhHheehHHHHHHHHHhcchhh
Confidence 999999999999999999999999999999999998 4445566777788899999999988753
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.93 E-value=1.9e-25 Score=180.67 Aligned_cols=141 Identities=25% Similarity=0.429 Sum_probs=127.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHccccc
Q psy5300 28 PQLTSSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEW 107 (177)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~ 107 (177)
...........+++.+++++|++||+++++++.+++++| ++.|+|+.|||++|++.++. .|+.......+.|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~-------~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~ 82 (464)
T 4dkl_A 11 SPSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMK-------TATNIYIFNLALADALATST-LPFQSVNYLMGTW 82 (464)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTC-------SHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSC
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccC-------CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCc
Confidence 334556678888999999999999999999999999998 99999999999999999876 8888888887899
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 108 LWGNMSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 108 ~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
..+...|++..++..++..+|++++++||+|||+||++|++ ...+++++..+++++|++++++++|+++
T Consensus 83 ~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~ 153 (464)
T 4dkl_A 83 PFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMF 153 (464)
T ss_dssp CSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997 5578999999999999999999988764
No 8
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.92 E-value=9.8e-25 Score=177.50 Aligned_cols=136 Identities=24% Similarity=0.347 Sum_probs=123.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHccccccccc
Q psy5300 32 SSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWGN 111 (177)
Q Consensus 32 ~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~~ 111 (177)
.......+++.+++++|++||+++++++.+++++| ++.|+|+.|||++|++.++..+|..+.... .|..+.
T Consensus 19 ~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~-------~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~ 89 (488)
T 3eml_A 19 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQ-------NVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAAC 89 (488)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC-------SSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhheeeccccC-------ChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccc
Confidence 34467788899999999999999999999999998 999999999999999999988987776543 678888
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 112 MSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 112 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
..|++..++...+..+|++++++||+|||++|++|++ ...+++++..+++++|++++++++|+++
T Consensus 90 ~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~ 156 (488)
T 3eml_A 90 HGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML 156 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999997 5679999999999999999999998875
No 9
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.92 E-value=6e-25 Score=178.90 Aligned_cols=139 Identities=23% Similarity=0.362 Sum_probs=121.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHH-Hcccccc
Q psy5300 30 LTSSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVW-SYTVEWL 108 (177)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~-~~~~~~~ 108 (177)
....+....+++.+++++|++||+++++++.+++++| ++.|+|+.|||++|++.++. .|+.... ...+.|.
T Consensus 16 ~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~-------~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~ 87 (484)
T 3vw7_A 16 SSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVK-------KPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQ 87 (484)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGC-------CHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-------CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcc
Confidence 3455677888899999999999999999999999998 99999999999999999765 5554444 4445899
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 109 WGNMSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 109 ~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
.+...|++..++...+..+|++++++||+|||+||++|++ ...+++++..+++++|++++++++|+++
T Consensus 88 ~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 157 (484)
T 3vw7_A 88 FGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLL 157 (484)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 4678999999999999999999998865
No 10
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.92 E-value=3e-25 Score=183.50 Aligned_cols=133 Identities=19% Similarity=0.279 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHcccccccccchh
Q psy5300 35 SSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWGNMSC 114 (177)
Q Consensus 35 ~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~~~~C 114 (177)
....+++.+++++|++||+++++++.+++++| ++.|+|+.|||++|++.++...|..+.. ....|..+...|
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr-------~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c 135 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFH-------RPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQW 135 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTC-------SHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc-------ChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCcccc
Confidence 67788899999999999999999999999999 9999999999999999999888876665 456788899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 115 KLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 115 ~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
++..++...+..+|++++++||+|||+||+ |++ ...+++++..+++++|++++++++|+++
T Consensus 136 ~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~ 198 (520)
T 3v2y_A 136 FLREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIM 198 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 997 5689999999999999999999988875
No 11
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.92 E-value=5.5e-25 Score=179.87 Aligned_cols=138 Identities=28% Similarity=0.402 Sum_probs=124.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHccccccc
Q psy5300 30 LTSSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLW 109 (177)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~ 109 (177)
....+....+++.+++++|++||+++++++.+++++| ++.|+|+.|||++|++.+ +..|..+..... .|.+
T Consensus 44 ~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~-------~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~ 114 (502)
T 3odu_A 44 ANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLR-------SMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYF 114 (502)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSC-------CHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-------CHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcC
Confidence 3445677888999999999999999999999999998 999999999999999995 578877776654 7999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 110 GNMSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 110 ~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
+...|++..++..++..+|++++++||+|||+||++|++ ...+++++..+++++|++++++++|+++
T Consensus 115 ~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~ 183 (502)
T 3odu_A 115 GNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFI 183 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHH
T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999997 5678888899999999999999998753
No 12
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.92 E-value=2.7e-25 Score=180.83 Aligned_cols=137 Identities=25% Similarity=0.385 Sum_probs=121.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHcc-ccccccc
Q psy5300 33 SASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYT-VEWLWGN 111 (177)
Q Consensus 33 ~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~-~~~~~~~ 111 (177)
.+....+++.+++++|++||+++++++.+++++| ++.|+|+.|||++|++.++..+|..+..... +.|..+.
T Consensus 37 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~-------~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~ 109 (481)
T 3pbl_A 37 PHAYYALSYCALILAIVFGNGLVCMAVLKERALQ-------TTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSR 109 (481)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTC-------SHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHhhhccccC-------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCc
Confidence 3455667889999999999999999999999998 9999999999999999999899987776655 5789999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcc-----ccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 112 MSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMKS-----ISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 112 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~~-----~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
..|++..++..++..+|++++++||+|||++|++|+++ ..+.+++..+++++|++++++++|+++
T Consensus 110 ~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~ 179 (481)
T 3pbl_A 110 ICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLF 179 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999963 567788899999999999999998764
No 13
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.92 E-value=2.5e-24 Score=174.36 Aligned_cols=137 Identities=20% Similarity=0.398 Sum_probs=124.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHH-hhHHHHHHccccccccc
Q psy5300 33 SASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFC-LAGEAVWSYTVEWLWGN 111 (177)
Q Consensus 33 ~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~-~~~~~~~~~~~~~~~~~ 111 (177)
......+++.+++++|++||+++++++.+++++| ++.|++++|||++|++.++.. .|..+.....++|..+.
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~-------~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~ 105 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQ-------TPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGF 105 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTC-------STTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccC-------CccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCH
Confidence 4556777889999999999999999999999888 899999999999999998874 78777777778899999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 112 MSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 112 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
..|++..++...+..+|+++++++|+|||++|++|++ ...+++++..+++++|++++++++|+++
T Consensus 106 ~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~ 172 (448)
T 2z73_A 106 AACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIF 172 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999997 5778999999999999999999988764
No 14
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.92 E-value=1.7e-24 Score=175.08 Aligned_cols=137 Identities=22% Similarity=0.413 Sum_probs=121.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHcccccccc
Q psy5300 31 TSSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWG 110 (177)
Q Consensus 31 ~~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~ 110 (177)
...+....+++.+++++|++||+++++++.+++++| ++.|+++.|||++|++. ++..|........+.|..+
T Consensus 122 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~-------~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~ 193 (434)
T 4ea3_A 122 LGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMK-------TATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFG 193 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC-------CHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccC-------chhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCc
Confidence 345667778899999999999999999999999998 99999999999999998 5678888887777889999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCcc
Q psy5300 111 NMSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQI 175 (177)
Q Consensus 111 ~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~ 175 (177)
...|++..++..++..+|++++++||+|||++|++|++ ...+++++..+++++|+++++.++|++
T Consensus 194 ~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~ 260 (434)
T 4ea3_A 194 NALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVA 260 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHh
Confidence 99999999999999999999999999999999999997 567899999999999999999998764
No 15
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.92 E-value=9e-25 Score=176.31 Aligned_cols=134 Identities=24% Similarity=0.445 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHcccccccccchh
Q psy5300 35 SSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWGNMSC 114 (177)
Q Consensus 35 ~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~~~~C 114 (177)
....+++.+++++|++||+++++++.+++++| ++.|+|+.|||++|++.++...|..+.....+.|..+...|
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~-------~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C 81 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLH-------TVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLC 81 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTC-------CGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhH
Confidence 45567889999999999999999999999998 99999999999999999999999999988888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCcc
Q psy5300 115 KLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQI 175 (177)
Q Consensus 115 ~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~ 175 (177)
++..++...+..+|++++++||+|||++|++|++ ...+++++..+++++|++++++++|.+
T Consensus 82 ~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~ 144 (452)
T 3rze_A 82 LFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPIL 144 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997 567999999999999999999998865
No 16
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.92 E-value=2.6e-24 Score=173.37 Aligned_cols=137 Identities=24% Similarity=0.343 Sum_probs=123.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHcccccccc
Q psy5300 31 TSSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWG 110 (177)
Q Consensus 31 ~~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~ 110 (177)
........+++.+++++|++||+++++++.+++++| ++.|+++.|||++|++.++..+|..+.... .|..+
T Consensus 28 ~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~-------~~~~~~l~~La~~Dll~~~~~~p~~~~~~~--~~~~~ 98 (447)
T 4eiy_A 28 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQ-------NVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAA 98 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC-------SHHHHHHHHHHHHHHHHHHTHHHHHHHHHT--TCEEE
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccC-------cHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccccC
Confidence 345567778899999999999999999999999998 999999999999999999888887766443 66778
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCccC
Q psy5300 111 NMSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQIG 176 (177)
Q Consensus 111 ~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~~ 176 (177)
...|++..++...+..+|++++++||+|||++|++|++ ...+++++..+++++|++++++++|+++
T Consensus 99 ~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~ 166 (447)
T 4eiy_A 99 CHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML 166 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGG
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhh
Confidence 88999999999999999999999999999999999997 5689999999999999999999998864
No 17
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.91 E-value=8.1e-25 Score=168.45 Aligned_cols=137 Identities=29% Similarity=0.498 Sum_probs=126.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHccccccccc
Q psy5300 32 SSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWGN 111 (177)
Q Consensus 32 ~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~~ 111 (177)
..+....+++.+++++|++||+++++++.+++++| ++.|+++.|||++|++.++...|........+.|..++
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~-------~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~ 81 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQ-------TLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGS 81 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC-------CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhc-------chHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccc
Confidence 34566778899999999999999999999999988 99999999999999999888888888888878999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCcc
Q psy5300 112 MSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQI 175 (177)
Q Consensus 112 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~ 175 (177)
..|++..++...+..+|+++++++|+|||+||++|++ ...+++++..+++++|+++++.++|++
T Consensus 82 ~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~ 147 (315)
T 4amj_A 82 FLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPI 147 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 457999999999999999999987765
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.90 E-value=7.4e-24 Score=174.67 Aligned_cols=137 Identities=26% Similarity=0.429 Sum_probs=126.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHhhHHHHHHccccccccc
Q psy5300 32 SSASSRAIILAILAVLSFVGNVLTIISIRKNRVHRGLRQHSWNGVYTLILHLSVADLFVTVFCLAGEAVWSYTVEWLWGN 111 (177)
Q Consensus 32 ~~~~~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~~~~~~~~~~~~~~l~~La~sDll~~l~~~~~~~~~~~~~~~~~~~ 111 (177)
.......+++.+++++|++||+++++++.+++++| ++.|+++.|||++|++.++..+|..+.....+.|..+.
T Consensus 180 ~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr-------~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~ 252 (514)
T 3sn6_R 180 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQ-------TVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGN 252 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC-------CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCS
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHhhhheecccccc-------cHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCc
Confidence 44566778899999999999999999999999998 99999999999999999998899888888888999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--cccccchhHHHHHHHHHHHHHhhcCcc
Q psy5300 112 MSCKLFKFLQMFSLYLSTFILVLIGIDRFLAVRYPMK--SISTSSRCCKFVIGAWILSALCSLPQI 175 (177)
Q Consensus 112 ~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~p~~--~~~t~~~~~~~i~~~W~~s~~~~~p~~ 175 (177)
..|++..++..++..+|++++++||+|||++|++|++ ...+++++..+++++|++++++++||+
T Consensus 253 ~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~ 318 (514)
T 3sn6_R 253 FWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPI 318 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999997 457999999999999999999886654
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.44 E-value=6.9e-08 Score=49.09 Aligned_cols=22 Identities=23% Similarity=0.418 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHhhhhcCCc
Q psy5300 127 LSTFILVLIGIDRFLAVRYPMK 148 (177)
Q Consensus 127 ~s~~~l~~isidRy~ai~~p~~ 148 (177)
+|++++++||+|||+||++|++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~ 23 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIE 23 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHG
T ss_pred cHHHHHHHHHHHHHHHhhhhhh
Confidence 6899999999999999999996
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.46 E-value=6.9e-05 Score=43.95 Aligned_cols=31 Identities=19% Similarity=0.298 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy5300 36 SRAIILAILAVLSFVGNVLTIISIRKNRVHR 66 (177)
Q Consensus 36 ~~~~~~~~~~~~gi~~N~~vi~~i~~~~~~~ 66 (177)
...++|.+++++|++||+++++++.++|..+
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~ 60 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHH 60 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccc
Confidence 6678899999999999999999998887554
No 21
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=31.28 E-value=92 Score=23.07 Aligned_cols=18 Identities=17% Similarity=0.305 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy5300 40 ILAILAVLSFVGNVLTII 57 (177)
Q Consensus 40 ~~~~~~~~gi~~N~~vi~ 57 (177)
+..+++++|-..-+.++.
T Consensus 41 ~i~~~gi~gN~lvi~vi~ 58 (364)
T 2ks9_A 41 VIVVTSVVGNVVVMWIIL 58 (364)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444443333333
Done!