BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5309
(1618 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BMJ2|SYLC_MOUSE Leucine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Lars PE=2 SV=2
Length = 1178
Score = 550 bits (1417), Expect = e-155, Method: Compositional matrix adjust.
Identities = 287/558 (51%), Positives = 361/558 (64%), Gaps = 104/558 (18%)
Query: 653 VLPYDPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEF 712
VLP++PVP++++P GNL AVTV ++LKIQSQND++KL EAKE +YL+GFYDG+MLV F
Sbjct: 425 VLPFEPVPVLEIPGIGNLPAVTVCDELKIQSQNDREKLAEAKEKLYLRGFYDGVMLVDGF 484
Query: 713 KGKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDD 772
KG+K+Q VKK +QK + G AL IY P V S S D+
Sbjct: 485 KGQKIQHVKKTIQKNMIDAGDAL---------IYMEPE------------KQVMSRSADE 523
Query: 773 YAALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVR 832
CVVALCDQWYLDYG+ WK QCL NM T+ +E R
Sbjct: 524 -----------------------CVVALCDQWYLDYGDENWKKQTFQCLKNMETFCEESR 560
Query: 833 RNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGE 892
+NF ASL+WL E+ACSRTYGLGT+LPWDEQWLIESLSDSTIYMA+YTVAHLLQGG G+
Sbjct: 561 KNFEASLDWLQEHACSRTYGLGTRLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGDLNGQ 620
Query: 893 NGNALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+ L I+ + +T +VWDYVFFK APF PK ++PK KLD +++EF++WYPVDLR SGKDL
Sbjct: 621 AESPLGIRPQQMTKDVWDYVFFKDAPF-PKTQIPKEKLDQLKQEFEFWYPVDLRASGKDL 679
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
I NHL+++IY H A+W ++ + WP +RANGHLLLNS K
Sbjct: 680 IPNHLSYYIYNHVAMWPEQSDKWPVSVRANGHLLLNSEK--------------------- 718
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
++ G+ L S + K + + L
Sbjct: 719 ----------------------MSKSTGNFLTLSQAVDKFSADGMRLA------------ 744
Query: 1073 LCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSE 1132
LAD+GD+VEDANFVE+MADAGILRLYT++EWVKE+LA+ S+LR+G DSFND+VF SE
Sbjct: 745 --LADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMLASCSSLRSGPADSFNDRVFASE 802
Query: 1133 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALL 1192
MN I +T+ +Y KM+FKEAL+TGFFE QAA+DKYREL A GMHR LV RF+EVQ +L
Sbjct: 803 MNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKYREL--ATEGMHRELVFRFIEVQTIL 860
Query: 1193 LCPVCPHVAEHVYQLLGK 1210
L P CPH+ EH++ LLGK
Sbjct: 861 LTPFCPHLCEHIWTLLGK 878
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/434 (53%), Positives = 297/434 (68%), Gaps = 81/434 (18%)
Query: 3 RKGTFKVEYLQKIEKEVQEEWDREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGH 62
RKGT KV++L++IEKE Q++W+ EK++E
Sbjct: 4 RKGTAKVDFLKEIEKEAQQKWEAEKVFE-------------------------------- 31
Query: 63 TFSLSKFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNR 122
S S+ ++ + S K+F TFP+PYMNGRLHLGHTFSLSKCEF+V + R
Sbjct: 32 -VSASRLEKQ----------KQSSKGKYFVTFPYPYMNGRLHLGHTFSLSKCEFAVGYQR 80
Query: 123 LKGKRVLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQ-TDKDDDDPVIKD 181
LKGK LFPFG HCTGMPIKACADKLKRE+E +G PP FP E+ E + + D V++D
Sbjct: 81 LKGKSCLFPFGLHCTGMPIKACADKLKREIELYGCPPDFPEEEEEEEESSAKPGDIVVRD 140
Query: 182 KSKGKKSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIH 241
K+KGKKSKA AKAGS+KYQW IM+SLGL DD+I KF++A HWLD+FPPLAVQDL++IG+
Sbjct: 141 KAKGKKSKAAAKAGSSKYQWDIMKSLGLSDDDIVKFSEAEHWLDYFPPLAVQDLKTIGLK 200
Query: 242 VDWRRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEG 301
VDWRR+FITTD NP++DSFVRWQF+ LR+R+KIK+GKRYT++SP+D QPCMDHDR +GEG
Sbjct: 201 VDWRRSFITTDVNPYYDSFVRWQFLTLRERNKIKFGKRYTIYSPKDGQPCMDHDRQTGEG 260
Query: 302 VGPQEYTLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSC 361
VGPQEYTL+K+++++PYP+KL L K +FLVAATLRPETM+GQTN WVRPDM
Sbjct: 261 VGPQEYTLVKLKVLEPYPSKLSGLKGKNIFLVAATLRPETMFGQTNCWVRPDM------- 313
Query: 362 LDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSARNMAYQGFTE 421
YI F TA G++F+CT+R+ARNM+YQGFT+
Sbjct: 314 ------------------------------KYIGFETANGDIFICTQRAARNMSYQGFTK 343
Query: 422 VEGKINVLLRLTGQ 435
G + V+ L G+
Sbjct: 344 HNGVVPVVKELMGE 357
Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/232 (59%), Positives = 167/232 (71%), Gaps = 35/232 (15%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHL+++IY H A+W ++ + WP +RANGHLLLNS KMSKS GNFLTL++AV K
Sbjct: 676 GKDLIPNHLSYYIYNHVAMWPEQSDKWPVSVRANGHLLLNSEKMSKSTGNFLTLSQAVDK 735
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
F SADGMRL LAD+GD+VEDANFVE+MA
Sbjct: 736 F---------------------------------SADGMRLALADAGDTVEDANFVEAMA 762
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
DAGILRLYT++EWVKE+LA+ S+LR+G DSFND+VF SEMN I +T+ +Y KM+FKEA
Sbjct: 763 DAGILRLYTWVEWVKEMLASCSSLRSGPADSFNDRVFASEMNAGIIKTDQNYEKMMFKEA 822
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
L+TGFFE QAA+DKYREL A GMHR LV RF+EVQ +LL P CPH+ EH+
Sbjct: 823 LKTGFFEFQAAKDKYREL--ATEGMHRELVFRFIEVQTILLTPFCPHLCEHI 872
Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 112/164 (68%), Positives = 133/164 (81%), Gaps = 1/164 (0%)
Query: 435 QVCIRSGDECVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
QV RS DECVVALCDQWYLDYG+ WK QCL NM T+ +E R+NF ASL+WL E+A
Sbjct: 515 QVMSRSADECVVALCDQWYLDYGDENWKKQTFQCLKNMETFCEESRKNFEASLDWLQEHA 574
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
CSRTYGLGT+LPWDEQWLIESLSDSTIYMA+YTVAHLLQGG G+ + L I+ + +T
Sbjct: 575 CSRTYGLGTRLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGDLNGQAESPLGIRPQQMTK 634
Query: 555 EVWDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
+VWDYVFFK APF PK ++PK KLD +++EF++WYPVDLR SGK
Sbjct: 635 DVWDYVFFKDAPF-PKTQIPKEKLDQLKQEFEFWYPVDLRASGK 677
Score = 190 bits (482), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 119/169 (70%), Gaps = 8/169 (4%)
Query: 1441 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1500
EMN I +T+ +Y KM+FKEAL+TGFFE QAA+DKYREL A GMHR LV RF+EVQ +
Sbjct: 802 EMNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKYREL--ATEGMHRELVFRFIEVQTI 859
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPIDDILVRSSSYLMEAAHAFRLQVKNHI 1560
LL P CPH+ EH++ LLGK SI+ A WP GP+D+ L+RSS YLME AH RL++KN++
Sbjct: 860 LLTPFCPHLCEHIWTLLGKPDSIMHASWPVAGPVDESLIRSSQYLMEVAHDLRLRLKNYM 919
Query: 1561 LTASKKKGKKVGGGGVGLVEKPTHATVWVAKTFPPWQSIVLTTMKQMME 1609
+ A KK K ++P+H T++VAK +P WQ I LTT++ E
Sbjct: 920 MPAKGKKTDKQPA------QRPSHCTIYVAKNYPVWQHITLTTLRSHFE 962
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V VK+L+ + +I+G +L AP+T + V+Y LPML+I+EDKGTG+VTSVPSDSPDD AAL
Sbjct: 348 VPVVKELMGE--EILGASLSAPLTCYKVVYVLPMLTIKEDKGTGVVTSVPSDSPDDLAAL 405
Query: 777 VDLKKKPPFREKYHVTDEMCV 797
DLKKK R K+ + D+M +
Sbjct: 406 RDLKKKQALRTKFGIRDDMVL 426
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 39/47 (82%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNI 645
+ T+LPWDEQWLIESLSDSTIYMA+YTVAHLLQGG G+ + L I
Sbjct: 581 LGTRLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGDLNGQAESPLGI 627
>sp|Q5R614|SYLC_PONAB Leucine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=LARS PE=2 SV=1
Length = 1176
Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust.
Identities = 288/564 (51%), Positives = 360/564 (63%), Gaps = 105/564 (18%)
Query: 653 VLPYDPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEF 712
VLP++PVP+I++P +GNL AVT+ ++LKIQSQND++KL EAKE +YLKGFY+GIMLV F
Sbjct: 423 VLPFEPVPVIEIPGFGNLSAVTICDELKIQSQNDREKLAEAKEKIYLKGFYEGIMLVDGF 482
Query: 713 KGKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDD 772
KG+KVQ+VKK +QKK+ G AL IY P V S S D+
Sbjct: 483 KGQKVQDVKKTIQKKMIDAGDAL---------IYMEPE------------KQVMSRSSDE 521
Query: 773 YAALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVR 832
CVVALCDQWYLDYGE WK QCL N+ T+ +E R
Sbjct: 522 -----------------------CVVALCDQWYLDYGEENWKKQTSQCLKNLETFCEETR 558
Query: 833 RNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGE 892
RNF A+L WL E+ACSRTYGLGT LPWDEQWLIESLSDSTIYMA+YTVAHLLQGG G+
Sbjct: 559 RNFEATLGWLQEHACSRTYGLGTHLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGNLHGQ 618
Query: 893 NGNALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+ L I+ + +T EVWDYVFFK APF PK ++ K KLD +++EF++WYPVDLR SGKDL
Sbjct: 619 AESPLGIRPQQMTKEVWDYVFFKEAPF-PKTQIAKEKLDQLKQEFEFWYPVDLRVSGKDL 677
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
+ NHL++++Y H A+W ++ + WP +RANGHLLLNS K S N
Sbjct: 678 VPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEK--------------MSKSTGN 723
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
LT L + ++G L L +A
Sbjct: 724 FLT---------------------------LTQAIDKFSADGMRLALADA---------- 746
Query: 1073 LCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSE 1132
GD+VEDANFVE+MADAGILRLYT++EWVKE++A +LR+G ++FND+VF SE
Sbjct: 747 ------GDTVEDANFVEAMADAGILRLYTWVEWVKEMVANWDSLRSGPANTFNDRVFASE 800
Query: 1133 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALL 1192
+N I +T+ +Y KM+FKEAL+TGFFE QAA+DKYREL A GMHR LV RF+EVQ LL
Sbjct: 801 LNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKYREL--AVEGMHRELVFRFIEVQTLL 858
Query: 1193 LCPVCPHVAEHVYQLLGK-DLIQN 1215
L P CPH+ EH++ LLGK D I N
Sbjct: 859 LAPFCPHLCEHIWTLLGKPDSIMN 882
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/435 (52%), Positives = 290/435 (66%), Gaps = 83/435 (19%)
Query: 2 ERKGTFKVEYLQKIEKEVQEEWDREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLG 61
ERKGT KV++L+KIEKE+Q++WD E+
Sbjct: 3 ERKGTAKVDFLKKIEKEIQQKWDTER---------------------------------- 28
Query: 62 HTFSLSKFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFN 121
++E + + K+F TFP+PYMNGRLHLGHTFSLSKCEF+V +
Sbjct: 29 -----------VFEVNASSLEKQTSKGKYFVTFPYPYMNGRLHLGHTFSLSKCEFAVGYQ 77
Query: 122 RLKGKRVLFPFGFHCTGMPIKACADKLKREMESFG-FPPQFPSEDTEPQTDKDDDDPVIK 180
RLKGK LFPFG HCTGMPIKACADKLKRE+E +G P ED E +T+ +D IK
Sbjct: 78 RLKGKCCLFPFGLHCTGMPIKACADKLKREIELYGCPPDFPDEEDEEEETNVKTEDTRIK 137
Query: 181 DKSKGKKSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGI 240
DK+KGKKSKA AKAGS+KYQW IM+SLGL D+EI KF++A HWLD+FPPLA+QDL+ +G+
Sbjct: 138 DKAKGKKSKAAAKAGSSKYQWGIMKSLGLSDEEIVKFSEAEHWLDYFPPLAIQDLKRLGL 197
Query: 241 HVDWRRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGE 300
VDWRR+FITTD NP++DSFVRWQF+ LR+R+KIK+GKRYT++SP+D QPCMDHDR +GE
Sbjct: 198 KVDWRRSFITTDVNPYYDSFVRWQFLTLRERNKIKFGKRYTIYSPKDGQPCMDHDRQTGE 257
Query: 301 GVGPQEYTLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALS 360
GVGPQEYTL+K+++++PYP+KL L K +FLVAATLRPET++GQTN WVRPDM
Sbjct: 258 GVGPQEYTLLKLKVLEPYPSKLSGLKGKNIFLVAATLRPETLFGQTNCWVRPDM------ 311
Query: 361 CLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSARNMAYQGFT 420
YI F T G++F+CT+++ARNM+YQGFT
Sbjct: 312 -------------------------------KYIGFETVNGDIFICTQKAARNMSYQGFT 340
Query: 421 EVEGKINVLLRLTGQ 435
+ G + V+ L G+
Sbjct: 341 KDNGVVPVVKELMGE 355
Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/232 (56%), Positives = 165/232 (71%), Gaps = 35/232 (15%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDL+ NHL++++Y H A+W ++ + WP +RANGHLLLNS KMSKS GNFLTLT+A+ K
Sbjct: 674 GKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGNFLTLTQAIDK 733
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
F SADGMRL LAD+GD+VEDANFVE+MA
Sbjct: 734 F---------------------------------SADGMRLALADAGDTVEDANFVEAMA 760
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
DAGILRLYT++EWVKE++A +LR+G ++FND+VF SE+N I +T+ +Y KM+FKEA
Sbjct: 761 DAGILRLYTWVEWVKEMVANWDSLRSGPANTFNDRVFASELNAGIIKTDQNYEKMMFKEA 820
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
L+TGFFE QAA+DKYREL A GMHR LV RF+EVQ LLL P CPH+ EH+
Sbjct: 821 LKTGFFEFQAAKDKYREL--AVEGMHRELVFRFIEVQTLLLAPFCPHLCEHI 870
Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/164 (68%), Positives = 130/164 (79%), Gaps = 1/164 (0%)
Query: 435 QVCIRSGDECVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
QV RS DECVVALCDQWYLDYGE WK QCL N+ T+ +E RRNF A+L WL E+A
Sbjct: 513 QVMSRSSDECVVALCDQWYLDYGEENWKKQTSQCLKNLETFCEETRRNFEATLGWLQEHA 572
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
CSRTYGLGT LPWDEQWLIESLSDSTIYMA+YTVAHLLQGG G+ + L I+ + +T
Sbjct: 573 CSRTYGLGTHLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGNLHGQAESPLGIRPQQMTK 632
Query: 555 EVWDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
EVWDYVFFK APF PK ++ K KLD +++EF++WYPVDLR SGK
Sbjct: 633 EVWDYVFFKEAPF-PKTQIAKEKLDQLKQEFEFWYPVDLRVSGK 675
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 119/169 (70%), Gaps = 8/169 (4%)
Query: 1441 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1500
E+N I +T+ +Y KM+FKEAL+TGFFE QAA+DKYREL A GMHR LV RF+EVQ L
Sbjct: 800 ELNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKYREL--AVEGMHRELVFRFIEVQTL 857
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPIDDILVRSSSYLMEAAHAFRLQVKNHI 1560
LL P CPH+ EH++ LLGK SI+ A WP GP+D++L+ SS YLME H RL++KN++
Sbjct: 858 LLAPFCPHLCEHIWTLLGKPDSIMNASWPVAGPVDEVLIHSSQYLMEVTHDLRLRLKNYM 917
Query: 1561 LTASKKKGKKVGGGGVGLVEKPTHATVWVAKTFPPWQSIVLTTMKQMME 1609
+ A KK K ++KP+H T++VAK +PPWQ L+ +++ E
Sbjct: 918 MPAKGKKTDKQP------LQKPSHCTIYVAKNYPPWQHTTLSVLRKHFE 960
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V VK+L+ + +I+G +L AP+TS+ VIY LPML+I+EDKGTG+VTSVPSDSPDD AAL
Sbjct: 346 VPVVKELMGE--EILGASLSAPLTSYKVIYVLPMLTIKEDKGTGVVTSVPSDSPDDIAAL 403
Query: 777 VDLKKKPPFREKYHVTDEMCV 797
DLKKK R KY + D+M +
Sbjct: 404 RDLKKKQALRAKYGIRDDMVL 424
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNI 645
+ T LPWDEQWLIESLSDSTIYMA+YTVAHLLQGG G+ + L I
Sbjct: 579 LGTHLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGNLHGQAESPLGI 625
>sp|Q9P2J5|SYLC_HUMAN Leucine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=LARS PE=1 SV=2
Length = 1176
Score = 542 bits (1396), Expect = e-153, Method: Compositional matrix adjust.
Identities = 288/564 (51%), Positives = 359/564 (63%), Gaps = 105/564 (18%)
Query: 653 VLPYDPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEF 712
VLP++PVP+I++P +GNL AVT+ ++LKIQSQND++KL EAKE +YLKGFY+GIMLV F
Sbjct: 423 VLPFEPVPVIEIPGFGNLSAVTICDELKIQSQNDREKLAEAKEKIYLKGFYEGIMLVDGF 482
Query: 713 KGKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDD 772
KG+KVQ+VKK +QKK+ G AL IY P V S S D+
Sbjct: 483 KGQKVQDVKKTIQKKMIDAGDAL---------IYMEPE------------KQVMSRSSDE 521
Query: 773 YAALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVR 832
CVVALCDQWYLDYGE WK QCL N+ T+ +E R
Sbjct: 522 -----------------------CVVALCDQWYLDYGEENWKKQTSQCLKNLETFCEETR 558
Query: 833 RNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGE 892
RNF A+L WL E+ACSRTYGLGT LPWDEQWLIESLSDSTIYMA+YTVAHLLQGG G+
Sbjct: 559 RNFEATLGWLQEHACSRTYGLGTHLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGNLHGQ 618
Query: 893 NGNALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+ L I+ + +T EVWDYVFFK APF PK ++ K KLD +++EF++WYPVDLR SGKDL
Sbjct: 619 AESPLGIRPQQMTKEVWDYVFFKEAPF-PKTQIAKEKLDQLKQEFEFWYPVDLRVSGKDL 677
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
+ NHL++++Y H A+W ++ + WP +RANGHLLLNS K S N
Sbjct: 678 VPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEK--------------MSKSTGN 723
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
LT L + ++G L L +A
Sbjct: 724 FLT---------------------------LTQAIDKFSADGMRLALADA---------- 746
Query: 1073 LCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSE 1132
GD+VEDANFVE+MADAGILRLYT++EWVKE++A +LR+G +FND+VF SE
Sbjct: 747 ------GDTVEDANFVEAMADAGILRLYTWVEWVKEMVANWDSLRSGPASTFNDRVFASE 800
Query: 1133 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALL 1192
+N I +T+ +Y KM+FKEAL+TGFFE QAA+DKYREL A GMHR LV RF+EVQ LL
Sbjct: 801 LNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKYREL--AVEGMHRELVFRFIEVQTLL 858
Query: 1193 LCPVCPHVAEHVYQLLGK-DLIQN 1215
L P CPH+ EH++ LLGK D I N
Sbjct: 859 LAPFCPHLCEHIWTLLGKPDSIMN 882
Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/435 (52%), Positives = 294/435 (67%), Gaps = 83/435 (19%)
Query: 2 ERKGTFKVEYLQKIEKEVQEEWDREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLG 61
ERKGT KV++L+KIEKE+Q++WD E+
Sbjct: 3 ERKGTAKVDFLKKIEKEIQQKWDTER---------------------------------- 28
Query: 62 HTFSLSKFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFN 121
++E + + + K+F TFP+PYMNGRLHLGHTFSLSKCEF+V +
Sbjct: 29 -----------VFEVNASNLEKQTSKGKYFVTFPYPYMNGRLHLGHTFSLSKCEFAVGYQ 77
Query: 122 RLKGKRVLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQ-TDKDDDDPVIK 180
RLKGK LFPFG HCTGMPIKACADKLKRE+E +G PP FP E+ E + T +D +IK
Sbjct: 78 RLKGKCCLFPFGLHCTGMPIKACADKLKREIELYGCPPDFPDEEEEEEETSVKTEDIIIK 137
Query: 181 DKSKGKKSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGI 240
DK+KGKKSKA AKAGS+KYQW IM+SLGL D+EI KF++A HWLD+FPPLA+QDL+ +G+
Sbjct: 138 DKAKGKKSKAAAKAGSSKYQWGIMKSLGLSDEEIVKFSEAEHWLDYFPPLAIQDLKRMGL 197
Query: 241 HVDWRRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGE 300
VDWRR+FITTD NP++DSFVRWQF+ LR+R+KIK+GKRYT++SP+D QPCMDHDR +GE
Sbjct: 198 KVDWRRSFITTDVNPYYDSFVRWQFLTLRERNKIKFGKRYTIYSPKDGQPCMDHDRQTGE 257
Query: 301 GVGPQEYTLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALS 360
GVGPQEYTL+K+++++PYP+KL L K +FLVAATLRPETM+GQTN WVRPDM
Sbjct: 258 GVGPQEYTLLKLKVLEPYPSKLSGLKGKNIFLVAATLRPETMFGQTNCWVRPDM------ 311
Query: 361 CLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSARNMAYQGFT 420
YI F T G++F+CT+++ARNM+YQGFT
Sbjct: 312 -------------------------------KYIGFETVNGDIFICTQKAARNMSYQGFT 340
Query: 421 EVEGKINVLLRLTGQ 435
+ G + V+ L G+
Sbjct: 341 KDNGVVPVVKELMGE 355
Score = 268 bits (685), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/232 (56%), Positives = 164/232 (70%), Gaps = 35/232 (15%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDL+ NHL++++Y H A+W ++ + WP +RANGHLLLNS KMSKS GNFLTLT+A+ K
Sbjct: 674 GKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGNFLTLTQAIDK 733
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
F SADGMRL LAD+GD+VEDANFVE+MA
Sbjct: 734 F---------------------------------SADGMRLALADAGDTVEDANFVEAMA 760
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
DAGILRLYT++EWVKE++A +LR+G +FND+VF SE+N I +T+ +Y KM+FKEA
Sbjct: 761 DAGILRLYTWVEWVKEMVANWDSLRSGPASTFNDRVFASELNAGIIKTDQNYEKMMFKEA 820
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
L+TGFFE QAA+DKYREL A GMHR LV RF+EVQ LLL P CPH+ EH+
Sbjct: 821 LKTGFFEFQAAKDKYREL--AVEGMHRELVFRFIEVQTLLLAPFCPHLCEHI 870
Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/164 (68%), Positives = 130/164 (79%), Gaps = 1/164 (0%)
Query: 435 QVCIRSGDECVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
QV RS DECVVALCDQWYLDYGE WK QCL N+ T+ +E RRNF A+L WL E+A
Sbjct: 513 QVMSRSSDECVVALCDQWYLDYGEENWKKQTSQCLKNLETFCEETRRNFEATLGWLQEHA 572
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
CSRTYGLGT LPWDEQWLIESLSDSTIYMA+YTVAHLLQGG G+ + L I+ + +T
Sbjct: 573 CSRTYGLGTHLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGNLHGQAESPLGIRPQQMTK 632
Query: 555 EVWDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
EVWDYVFFK APF PK ++ K KLD +++EF++WYPVDLR SGK
Sbjct: 633 EVWDYVFFKEAPF-PKTQIAKEKLDQLKQEFEFWYPVDLRVSGK 675
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 119/169 (70%), Gaps = 8/169 (4%)
Query: 1441 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1500
E+N I +T+ +Y KM+FKEAL+TGFFE QAA+DKYREL A GMHR LV RF+EVQ L
Sbjct: 800 ELNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKYREL--AVEGMHRELVFRFIEVQTL 857
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPIDDILVRSSSYLMEAAHAFRLQVKNHI 1560
LL P CPH+ EH++ LLGK SI+ A WP GP++++L+ SS YLME H RL++KN++
Sbjct: 858 LLAPFCPHLCEHIWTLLGKPDSIMNASWPVAGPVNEVLIHSSQYLMEVTHDLRLRLKNYM 917
Query: 1561 LTASKKKGKKVGGGGVGLVEKPTHATVWVAKTFPPWQSIVLTTMKQMME 1609
+ A KK K ++KP+H T++VAK +PPWQ L+ +++ E
Sbjct: 918 MPAKGKKTDKQP------LQKPSHCTIYVAKNYPPWQHTTLSVLRKHFE 960
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V VK+L+ + +I+G +L AP+TS+ VIY LPML+I+EDKGTG+VTSVPSDSPDD AAL
Sbjct: 346 VPVVKELMGE--EILGASLSAPLTSYKVIYVLPMLTIKEDKGTGVVTSVPSDSPDDIAAL 403
Query: 777 VDLKKKPPFREKYHVTDEMCV 797
DLKKK R KY + D+M +
Sbjct: 404 RDLKKKQALRAKYGIRDDMVL 424
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNI 645
+ T LPWDEQWLIESLSDSTIYMA+YTVAHLLQGG G+ + L I
Sbjct: 579 LGTHLPWDEQWLIESLSDSTIYMAFYTVAHLLQGGNLHGQAESPLGI 625
>sp|Q09996|SYLC_CAEEL Leucine--tRNA ligase OS=Caenorhabditis elegans GN=lrs-1 PE=3 SV=2
Length = 1186
Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/567 (45%), Positives = 330/567 (58%), Gaps = 106/567 (18%)
Query: 653 VLPYDPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEF 712
VLP++PVPII++ G+L AV + +LKI+SQN+KDKL+EAK+ VYLKGFYDG+MLVG++
Sbjct: 424 VLPFEPVPIIKIEGLGDLAAVEMCSRLKIESQNEKDKLEEAKKEVYLKGFYDGVMLVGKY 483
Query: 713 KGKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDD 772
GKK +VKK++Q + G+A K Y P + G
Sbjct: 484 AGKKTADVKKVIQDDLTAEGLATK---------YVEPEKKVMSRSG-------------- 520
Query: 773 YAALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVR 832
DE CVVALCDQWYL+YGE WKAAA++ L + T++DE R
Sbjct: 521 --------------------DE-CVVALCDQWYLNYGEAEWKAAAKKVLEPLRTFNDETR 559
Query: 833 RNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGE 892
R +++WLHEYACSR+YGLGTKLPWD Q+LIESLSDSTIY AYYTVAHLLQ G F G
Sbjct: 560 RGLETTVDWLHEYACSRSYGLGTKLPWDTQYLIESLSDSTIYNAYYTVAHLLQQGAFDGS 619
Query: 893 NGNALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
IKA+ +T W YVF V + KL +R+EF YWYP+D+R SGKDL
Sbjct: 620 VVGPAGIKADQMTDASWSYVFLGEIYDSKTMPVEEEKLKSLRKEFMYWYPIDMRASGKDL 679
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
I NHLT+ ++ H AIW + WP+GIRANGHLLLN+ K +
Sbjct: 680 IGNHLTYLLFNHAAIWPTDTSKWPKGIRANGHLLLNNEK------------------MSK 721
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
F+ + AI K S ++G L+L +A
Sbjct: 722 STGNFMTLEEAI----------------------EKFS-ADGMRLSLADA---------- 748
Query: 1073 LCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQST--LRTGSQDSFNDKVFL 1130
GD +EDANFV +MADA ILRL+T IEW+KE++ + LR ++ F D+VF
Sbjct: 749 ------GDGLEDANFVYAMADAAILRLFTMIEWIKEMIEQRDAGLLRKDAK-KFADRVFA 801
Query: 1131 SEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAA-EGGMHRTLVLRFVEVQ 1189
+EMN I TE +Y FK+AL+TGFFE QA RD YREL A + M +LV RF+E Q
Sbjct: 802 NEMNSLIAATEQNYEATNFKDALKTGFFEYQAIRDTYRELCAGIDEPMSESLVFRFIETQ 861
Query: 1190 ALLLCPVCPHVAEHVYQLLGKD-LIQN 1215
L+L P+CPH+AE+++QLLGKD LI N
Sbjct: 862 MLILSPICPHIAEYIWQLLGKDGLIVN 888
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/432 (50%), Positives = 266/432 (61%), Gaps = 89/432 (20%)
Query: 2 ERKGTFKVEYLQKIEKEVQEEWDREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLG 61
ERK KV LQ+IEK +QE W+ +K +E
Sbjct: 7 ERK---KVAQLQEIEKSIQELWESKKAFE------------------------------- 32
Query: 62 HTFSLSKFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFN 121
DA R K+ TFPFPYMNGRLHLGHTFS SKCEF+ F
Sbjct: 33 -----------------ADA-RDDGKPKYLVTFPFPYMNGRLHLGHTFSASKCEFAAGFQ 74
Query: 122 RLKGKRVLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDD-DPVIK 180
RL+GK VLFPFGFHCTGMPIKACADKLKREM+ FG+PP FP + E ++ D +IK
Sbjct: 75 RLQGKEVLFPFGFHCTGMPIKACADKLKREMQDFGYPPNFPEDVVEEVKEEVSAVDEIIK 134
Query: 181 DKSKGKKSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGI 240
DKSKGKKSK VAK G+AKYQWQIM+SLGL D+EI++F+D +HWL +FPP + DL+ +G+
Sbjct: 135 DKSKGKKSKLVAKTGNAKYQWQIMKSLGLCDEEIKEFSDPNHWLYYFPPHCIADLKKMGL 194
Query: 241 HVDWRRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGE 300
DWRR+FITTD NP+FDSFVRWQF LR KI +GKRYT++SP+D QPCMDHDRASGE
Sbjct: 195 KADWRRSFITTDVNPYFDSFVRWQFNLLRAAKKIDFGKRYTIYSPKDGQPCMDHDRASGE 254
Query: 301 GVGPQEYTLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALS 360
GVGPQEYTLIK++++ P P L + + ++LVAATLRPETMYGQTN ++ PD+ Y
Sbjct: 255 GVGPQEYTLIKLKVLDPKPQALSHI-KEDIYLVAATLRPETMYGQTNCYLHPDIQY---- 309
Query: 361 CLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSARNMAYQGFT 420
Y N +VFV T RSAR M+YQG T
Sbjct: 310 ----------------SVFYATEN---------------EKQVFVATARSARIMSYQGLT 338
Query: 421 EVEGKINVLLRL 432
+ GK+N +L L
Sbjct: 339 KENGKVNYVLGL 350
Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 151/235 (64%), Gaps = 37/235 (15%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLT+ ++ H AIW + WP+GIRANGHLLLN+ KMSKS GNF+TL EA++K
Sbjct: 676 GKDLIGNHLTYLLFNHAAIWPTDTSKWPKGIRANGHLLLNNEKMSKSTGNFMTLEEAIEK 735
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
FSADGMRL LAD+GD +EDANFV +MADAA
Sbjct: 736 FSADGMRLSLADAGDGLEDANFVYAMADAA------------------------------ 765
Query: 1329 DAGILRLYTFIEWVKEILATQST--LRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFK 1386
ILRL+T IEW+KE++ + LR ++ F D+VF +EMN I TE +Y FK
Sbjct: 766 ---ILRLFTMIEWIKEMIEQRDAGLLRKDAK-KFADRVFANEMNSLIAATEQNYEATNFK 821
Query: 1387 EALRTGFFELQAARDKYRELTAA-EGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+AL+TGFFE QA RD YREL A + M +LV RF+E Q L+L P+CPH+AE++
Sbjct: 822 DALKTGFFEYQAIRDTYRELCAGIDEPMSESLVFRFIETQMLILSPICPHIAEYI 876
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 117/164 (71%)
Query: 435 QVCIRSGDECVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
+V RSGDECVVALCDQWYL+YGE WKAAA++ L + T++DE RR +++WLHEYA
Sbjct: 514 KVMSRSGDECVVALCDQWYLNYGEAEWKAAAKKVLEPLRTFNDETRRGLETTVDWLHEYA 573
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
CSR+YGLGTKLPWD Q+LIESLSDSTIY AYYTVAHLLQ G F G IKA+ +T
Sbjct: 574 CSRSYGLGTKLPWDTQYLIESLSDSTIYNAYYTVAHLLQQGAFDGSVVGPAGIKADQMTD 633
Query: 555 EVWDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
W YVF V + KL +R+EF YWYP+D+R SGK
Sbjct: 634 ASWSYVFLGEIYDSKTMPVEEEKLKSLRKEFMYWYPIDMRASGK 677
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 105/167 (62%), Gaps = 9/167 (5%)
Query: 1441 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAA-EGGMHRTLVLRFVEVQA 1499
EMN I TE +Y FK+AL+TGFFE QA RD YREL A + M +LV RF+E Q
Sbjct: 803 EMNSLIAATEQNYEATNFKDALKTGFFEYQAIRDTYRELCAGIDEPMSESLVFRFIETQM 862
Query: 1500 LLLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPIDDILVRSSSYLMEAAHAFRLQVKNH 1559
L+L P+CPH+AE+++QLLGK G IV A WP P+D+ L + ++ E+ FR ++K +
Sbjct: 863 LILSPICPHIAEYIWQLLGKDGLIVNAPWPTVDPVDEKLAIGARFITESLAEFRARLKTY 922
Query: 1560 ILTASKKKGKKVGGGGVGLVEKPTHATVWVAKTFPPWQSIVLTTMKQ 1606
+T KK K++ E PT A ++VAK +PPWQ +L +++
Sbjct: 923 -MTPKKKALKEIP-------EVPTEAVIYVAKEYPPWQKTILDILEK 961
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 55/68 (80%)
Query: 730 IIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREKY 789
I+G L AP+ + +Y LPML+I++DKGTG+VTSVPSDSPDD+AAL DLKKK P REKY
Sbjct: 358 ILGAPLSAPLAKYERVYALPMLTIKDDKGTGVVTSVPSDSPDDFAALSDLKKKKPLREKY 417
Query: 790 HVTDEMCV 797
+TDEM +
Sbjct: 418 GLTDEMVL 425
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 33/39 (84%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRG 637
+ TKLPWD Q+LIESLSDSTIY AYYTVAHLLQ G F G
Sbjct: 580 LGTKLPWDTQYLIESLSDSTIYNAYYTVAHLLQQGAFDG 618
>sp|Q10490|SYLC_SCHPO Putative leucine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=lrs1 PE=1 SV=1
Length = 1111
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/552 (40%), Positives = 312/552 (56%), Gaps = 107/552 (19%)
Query: 654 LPYDPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFK 713
+ Y+ VPII+ P YG++CA + +KLKIQS D +L +AKEL Y + FY G M++G++
Sbjct: 448 MKYEAVPIIRTPSYGDMCAEFLCKKLKIQSPKDVKQLAQAKELAYKECFYQGTMIIGKYS 507
Query: 714 GKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDY 773
G+KV+ K ++K++ G+A +Y P V S S DD
Sbjct: 508 GEKVETAKPKVRKELIDQGLAF---------VYNEPE------------GQVISRSGDD- 545
Query: 774 AALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRR 833
C+VALCDQW+LDYGE +WKA E+ L +NT+ EVR
Sbjct: 546 ----------------------CIVALCDQWFLDYGEASWKAVTEKALDRLNTFSPEVRN 583
Query: 834 NFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 893
F +L+WL ++AC+R+YGLGT+LPWD Q+L+ESL+DSTIYMAYYT+ HLL + G+
Sbjct: 584 GFLKTLDWLSQWACARSYGLGTRLPWDPQFLVESLTDSTIYMAYYTICHLLHSDVY-GKV 642
Query: 894 GNALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLI 953
ALNIK E +TPEVWD+V F+ AP P + L + REFQY+YP D+R SGKDL+
Sbjct: 643 PGALNIKPEQMTPEVWDHV-FRQAPKPKNTSISDEALARLCREFQYFYPFDIRASGKDLV 701
Query: 954 QNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNH 1013
NHLTF +Y HTAI+ + + WP+GIRANGHLL+N K +
Sbjct: 702 PNHLTFCLYTHTAIFDE--KYWPKGIRANGHLLMNGEK------------------MSKS 741
Query: 1014 LTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRL 1073
F+ +H A K ++ L L +A
Sbjct: 742 TGNFMTLHEA-----------------------TKKFGADATRLALADA----------- 767
Query: 1074 CLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEM 1133
GD+V+DANF E++A++ ILRLYT W KE++ LRTG + F+DKVF +E+
Sbjct: 768 -----GDTVDDANFEEALANSAILRLYTQEAWCKEMMENLDNLRTGPYN-FHDKVFENEI 821
Query: 1134 NLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLL 1193
N I+ + + ++ LFK AL++ F++LQ ARD YRE+T A+ MHR LV R++E Q LLL
Sbjct: 822 NQLIESSREAFSATLFKAALKSCFYDLQNARDWYREVT-ADRKMHRDLVCRWIETQVLLL 880
Query: 1194 CPVCPHVAEHVY 1205
PH +EH++
Sbjct: 881 ATFAPHWSEHIW 892
Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/458 (41%), Positives = 251/458 (54%), Gaps = 83/458 (18%)
Query: 4 KGTFKVEYLQKIEKEVQEEWDREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHT 63
+ T K + L ++EK+ Q++W EK +E V + P D+ +P
Sbjct: 21 ENTTKRDTLIELEKKYQQKWQEEKAFE--VDAPLEDVPIDELRKKYP------------- 65
Query: 64 FSLSKFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRL 123
KFF P+PYMNG LHLGH F+LSK EF+ F RL
Sbjct: 66 -------------------------KFFGNMPYPYMNGALHLGHAFTLSKVEFTTAFERL 100
Query: 124 KGKRVLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKS 183
GKRVLFP GFHCTGMPI A AD+L RE+E FG P E E + +D +
Sbjct: 101 NGKRVLFPMGFHCTGMPICASADRLSREIEMFGPSFDVPEEKEEEVEVEVKTPNAREDVT 160
Query: 184 K--GKKSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIH 241
K GKKSKA AK + KYQ+QIM+SLG+ EI KFADA +WL +FPPL +D G+
Sbjct: 161 KHSGKKSKAAAKTAAVKYQFQIMESLGVPRTEIHKFADAKYWLSYFPPLCQRDCTEFGLG 220
Query: 242 VDWRRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEG 301
+DWRR+FITTD NP++DSFVRWQ L D KIK+G+RYTV+S +D QPCMDHDR SGEG
Sbjct: 221 IDWRRSFITTDVNPYYDSFVRWQVNHLHDSGKIKFGERYTVYSIKDGQPCMDHDRKSGEG 280
Query: 302 VGPQEYTLIKMRLVK-PYPAKLCC----LDSKPVFLVAATLRPETMYGQTNAWVRPDMAY 356
VGPQEYT IKM +++ P A+ L +K V ++AATLRPETMYGQTN +V P++ Y
Sbjct: 281 VGPQEYTGIKMEVLEFPEAARKALQSIDLSNKKVCMIAATLRPETMYGQTNCYVGPNITY 340
Query: 357 IALSCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSARNMAY 416
I + E+F+CT R+A NMAY
Sbjct: 341 ------------------------------------GIYESNVPNELFICTRRAANNMAY 364
Query: 417 QGFTEVEGKINVLLRLTGQVCIRSGDECVVALCDQWYL 454
Q ++ G ++ L + GQ I + +++ Q Y+
Sbjct: 365 QKLSKERGVVSELGTIKGQDLIGALVNAPLSVHKQVYV 402
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/165 (57%), Positives = 122/165 (73%), Gaps = 2/165 (1%)
Query: 434 GQVCIRSGDECVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEY 493
GQV RSGD+C+VALCDQW+LDYGE +WKA E+ L +NT+ EVR F +L+WL ++
Sbjct: 536 GQVISRSGDDCIVALCDQWFLDYGEASWKAVTEKALDRLNTFSPEVRNGFLKTLDWLSQW 595
Query: 494 ACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLT 553
AC+R+YGLGT+LPWD Q+L+ESL+DSTIYMAYYT+ HLL + G+ ALNIK E +T
Sbjct: 596 ACARSYGLGTRLPWDPQFLVESLTDSTIYMAYYTICHLLHSDVY-GKVPGALNIKPEQMT 654
Query: 554 PEVWDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
PEVWD+V F+ AP P + L + REFQY+YP D+R SGK
Sbjct: 655 PEVWDHV-FRQAPKPKNTSISDEALARLCREFQYFYPFDIRASGK 698
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 146/232 (62%), Gaps = 37/232 (15%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDL+ NHLTF +Y HTAI+ ++ WP+GIRANGHLL+N KMSKS GNF+TL EA KK
Sbjct: 697 GKDLVPNHLTFCLYTHTAIFDEK--YWPKGIRANGHLLMNGEKMSKSTGNFMTLHEATKK 754
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
F AD RL LAD+GD+V+DANF E++A++A
Sbjct: 755 FGADATRLALADAGDTVDDANFEEALANSA------------------------------ 784
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
ILRLYT W KE++ LRTG + F+DKVF +E+N I+ + + ++ LFK A
Sbjct: 785 ---ILRLYTQEAWCKEMMENLDNLRTGPYN-FHDKVFENEINQLIESSREAFSATLFKAA 840
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
L++ F++LQ ARD YRE+T A+ MHR LV R++E Q LLL PH +EH+
Sbjct: 841 LKSCFYDLQNARDWYREVT-ADRKMHRDLVCRWIETQVLLLATFAPHWSEHI 891
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Query: 726 KKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPF 785
K D+IG + AP++ H +Y LPM ++ KGTG+VTSVPSDSPDD+A L +L+KK F
Sbjct: 381 KGQDLIGALVNAPLSVHKQVYVLPMETVLATKGTGVVTSVPSDSPDDFATLTELRKKAEF 440
Query: 786 REKYHVTDE 794
YH+ E
Sbjct: 441 ---YHLNPE 446
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNI 645
+ T+LPWD Q+L+ESL+DSTIYMAYYT+ HLL + G+ ALNI
Sbjct: 603 LGTRLPWDPQFLVESLTDSTIYMAYYTICHLLHSDVY-GKVPGALNI 648
>sp|Q54N83|SYLC_DICDI Leucine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=leuS
PE=3 SV=1
Length = 1058
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/563 (41%), Positives = 311/563 (55%), Gaps = 109/563 (19%)
Query: 653 VLPYDPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEF 712
VLP++ VPII +P Y N AV Y+ L I+SQND+ L +AK+L Y KGF DG+M VG +
Sbjct: 419 VLPFEVVPIIDIPGYSNESAVRAYKDLGIKSQNDRALLDQAKDLCYQKGFNDGVMSVGPY 478
Query: 713 KGKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDD 772
G+KV EVKK+++ ++ G A V Y+ P + V S S D+
Sbjct: 479 AGRKVSEVKKIIKDEMVASGQA---------VDYSEP------------TSKVVSRSGDE 517
Query: 773 YAALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEP--TWKAAAEQCLANMNTYHDE 830
CVVAL DQWY++YG+ WK + L +M Y E
Sbjct: 518 -----------------------CVVALSDQWYINYGDDDIEWKNQTIKQLESMEFYSAE 554
Query: 831 VRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFR 890
++ F +L W++++ACSR++GLGT LPWDE++LIESLSDSTIYMA+YTVAHLLQG
Sbjct: 555 TKKKFEIALGWMNQWACSRSFGLGTHLPWDEKFLIESLSDSTIYMAFYTVAHLLQGDVNG 614
Query: 891 GENGNALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 950
+ G+A I + +T WDYV P+P C V + KL +++EF YWYPVD+R SG
Sbjct: 615 SKPGSA-GITPKQMTSACWDYVLM-GKPYPEGCEVSEEKLKELKKEFTYWYPVDIRVSGA 672
Query: 951 DLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLI 1010
DLIQNHLTFF+Y H AI+ E + P+ IRANG + LN K S
Sbjct: 673 DLIQNHLTFFLYTHAAIF--EKKFQPKSIRANGFVNLNGEK--------------MSKST 716
Query: 1011 QNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADG 1070
N LT L+ + AK S ADG
Sbjct: 717 GNFLT--------------------------LVDSVAKFS-----------------ADG 733
Query: 1071 MRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFL 1130
R+ LAD+GDS+EDANFV+ A +L+L+T I+WV+E L + R+G D D +F
Sbjct: 734 TRVALADAGDSIEDANFVDQTAVTSLLKLHTQIQWVQETLDSIDKFRSGPLDRIQDTIFE 793
Query: 1131 SEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQA 1190
SE+N I E+E Y K F++AL FF+LQ ARD Y+ T + MH+ LVLRF+EVQA
Sbjct: 794 SEINNIIVESEKAYQKTNFRDALHLVFFDLQNARDHYKVTTLDQ--MHKDLVLRFIEVQA 851
Query: 1191 LLLCPVCPHVAEHVYQLLGKDLI 1213
LL+ P+ PH A+ ++ +LGK I
Sbjct: 852 LLIYPIAPHFAQKLFNMLGKGNI 874
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/434 (44%), Positives = 254/434 (58%), Gaps = 91/434 (20%)
Query: 6 TFKVEYLQKIEKEVQEEWDREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFS 65
T K+++++ EKEVQ +W+ +K +E DA PD
Sbjct: 3 TAKLDFVRAYEKEVQNKWESDKQFEIDALDA----PD----------------------- 35
Query: 66 LSKFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKG 125
+ K+ TFP+PYMNGRLH+GH F+++K EF +F RL G
Sbjct: 36 -------------------AEHPKYLATFPYPYMNGRLHVGHVFTITKAEFMCQFQRLMG 76
Query: 126 KRVLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEP---QTDKDDDDPVIKDK 182
KRVLFPF FHCTGMPIKACADKLK+E+E FG PP FP + +P T +DP+
Sbjct: 77 KRVLFPFAFHCTGMPIKACADKLKKEIEQFGCPPVFPVIEEKPIQEVTTAVKEDPL---S 133
Query: 183 SKGKKSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHV 242
K KK+KAVAK+G A YQW+IMQSLG+ D+EI FAD+++WL++FPP DL+ +G+ V
Sbjct: 134 FKSKKTKAVAKSGGAVYQWKIMQSLGISDEEIPMFADSAYWLNYFPPHCESDLKLLGVGV 193
Query: 243 DWRRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGV 302
DWRR+FITTD N ++DSFVRWQF L+ K+KYGKRY+++S D+Q C DH+RA GEGV
Sbjct: 194 DWRRSFITTDVNGYYDSFVRWQFESLKALGKVKYGKRYSIWSTIDDQQCADHERAQGEGV 253
Query: 303 GPQEYTLIKMRLVKPYPAKLCCLDS--KPVFLVAATLRPETMYGQTNAWVRPDMAYIALS 360
GPQ YTLIK+ +V+P P L + S K ++LV TLRPETMYGQTN W
Sbjct: 254 GPQNYTLIKLEVVEPIPECLKEIHSQGKKIYLVPGTLRPETMYGQTNCW----------- 302
Query: 361 CLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSARNMAYQGFT 420
+ P Y AF A G++FVCTERSARNM+YQ T
Sbjct: 303 --------------------------ILPTGKYGAFEMANGDIFVCTERSARNMSYQQMT 336
Query: 421 EVEGKINVLLRLTG 434
+G+ L + G
Sbjct: 337 TGKGEYKCLAKFEG 350
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 138/232 (59%), Gaps = 37/232 (15%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
G DLIQNHLTFF+Y H AI+ E + P+ IRANG + LN KMSKS GNFLTL ++V K
Sbjct: 671 GADLIQNHLTFFLYTHAAIF--EKKFQPKSIRANGFVNLNGEKMSKSTGNFLTLVDSVAK 728
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
FS ADG R+ LAD+GDS+EDANFV+ A
Sbjct: 729 FS---------------------------------ADGTRVALADAGDSIEDANFVDQTA 755
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
+L+L+T I+WV+E L + R+G D D +F SE+N I E+E Y K F++A
Sbjct: 756 VTSLLKLHTQIQWVQETLDSIDKFRSGPLDRIQDTIFESEINNIIVESEKAYQKTNFRDA 815
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
L FF+LQ ARD Y+ T + MH+ LVLRF+EVQALL+ P+ PH A+ +
Sbjct: 816 LHLVFFDLQNARDHYKVTTLDQ--MHKDLVLRFIEVQALLIYPIAPHFAQKL 865
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 115/167 (68%), Gaps = 4/167 (2%)
Query: 433 TGQVCIRSGDECVVALCDQWYLDYGEP--TWKAAAEQCLANMNTYHDEVRRNFGASLNWL 490
T +V RSGDECVVAL DQWY++YG+ WK + L +M Y E ++ F +L W+
Sbjct: 507 TSKVVSRSGDECVVALSDQWYINYGDDDIEWKNQTIKQLESMEFYSAETKKKFEIALGWM 566
Query: 491 HEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAE 550
+++ACSR++GLGT LPWDE++LIESLSDSTIYMA+YTVAHLLQG + G+A I +
Sbjct: 567 NQWACSRSFGLGTHLPWDEKFLIESLSDSTIYMAFYTVAHLLQGDVNGSKPGSA-GITPK 625
Query: 551 DLTPEVWDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSG 597
+T WDYV P+P C V + KL +++EF YWYPVD+R SG
Sbjct: 626 QMTSACWDYVLM-GKPYPEGCEVSEEKLKELKKEFTYWYPVDIRVSG 671
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 101/161 (62%), Gaps = 10/161 (6%)
Query: 1441 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1500
E+N I E+E Y K F++AL FF+LQ ARD Y+ T + MH+ LVLRF+EVQAL
Sbjct: 795 EINNIIVESEKAYQKTNFRDALHLVFFDLQNARDHYKVTTLDQ--MHKDLVLRFIEVQAL 852
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPIDDILVRSSSYLMEAAHAFRLQVKNHI 1560
L+ P+ PH A+ ++ +LG KG+I+ A WP+ G ID ++ ++Y+ + + FR++++ +
Sbjct: 853 LIYPIAPHFAQKLFNMLG-KGNILSAGWPKAGAIDYEALKKNNYVQQTIYNFRMKLQ--V 909
Query: 1561 LTASKKKGKKVGGGGVGLVEKPTHATVWVAKTFPPWQSIVL 1601
+K KGK G + P +T+ V+K++P WQ VL
Sbjct: 910 YQKAKLKGKPAGTKAI-----PDQSTIIVSKSYPKWQQDVL 945
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%)
Query: 729 DIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREK 788
DI+G ALKAP+ + ++Y LPML+I E+KGTG+VTSVPSDSPDDYA+L DLK K P R K
Sbjct: 352 DILGAALKAPLAINPIVYVLPMLTIDENKGTGVVTSVPSDSPDDYASLQDLKAKAPLRAK 411
Query: 789 YHVTDE 794
+ + DE
Sbjct: 412 FSIKDE 417
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNA 642
+ T LPWDE++LIESLSDSTIYMA+YTVAHLLQG + G+A
Sbjct: 577 LGTHLPWDEKFLIESLSDSTIYMAFYTVAHLLQGDVNGSKPGSA 620
>sp|P26637|SYLC_YEAST Leucine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CDC60 PE=1 SV=1
Length = 1090
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/564 (39%), Positives = 307/564 (54%), Gaps = 111/564 (19%)
Query: 654 LPYDPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFK 713
+ ++ VPI+ +YG+L A + E+ KIQS DK+ L EAK++ Y + +Y G M+ G +K
Sbjct: 440 IDHEIVPIMHTEKYGDLTAKAIVEEKKIQSPKDKNLLAEAKKIAYKEDYYTGTMIYGPYK 499
Query: 714 GKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDY 773
G+KV++ K + K D+I + +Y P + V S S DD
Sbjct: 500 GEKVEQAKNKV--KADMIAAG-------EAFVYNEPE------------SQVMSRSGDD- 537
Query: 774 AALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRR 833
C+V+L DQWY+DYGE +WK A +CL M + EV+
Sbjct: 538 ----------------------CIVSLEDQWYVDYGEESWKKQAIECLEGMQLFAPEVKN 575
Query: 834 NFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 893
F L+WL +A RTYGLGT+LPWDE++L+ESLSDSTIY ++YT+AHLL + E
Sbjct: 576 AFEGVLDWLKNWAVCRTYGLGTRLPWDEKYLVESLSDSTIYQSFYTIAHLLFKDYYGNEI 635
Query: 894 GNALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLI 953
G L I A+ +T EV+DY+F + +P L +RREF+Y+
Sbjct: 636 G-PLGISADQMTDEVFDYIF-QHQDDVKNTNIPLPALQKLRREFEYF------------- 680
Query: 954 QNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNH 1013
+P + +G DLI NH
Sbjct: 681 ---------------------YPLDVSISG-----------------------KDLIPNH 696
Query: 1014 LTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRL 1073
LTFFIY H A++ + WP+GIRANGHL+LN++KMSKS GNF+TL + V+KF AD R+
Sbjct: 697 LTFFIYTHVALFPKK--FWPKGIRANGHLMLNNSKMSKSTGNFMTLEQTVEKFGADAARI 754
Query: 1074 CLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEM 1133
AD+GD+VEDANF ES A+A ILRL+ EW +EI +S LRTG F D F EM
Sbjct: 755 AFADAGDTVEDANFDESNANAAILRLFNLKEWAEEI-TKESNLRTGEITDFFDIAFEHEM 813
Query: 1134 NLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLL 1193
N I++T + Y +K AL+ G F+ QAARD YRE A G MH+ L+ R++E QALLL
Sbjct: 814 NALIEKTYEQYALTNYKNALKYGLFDFQAARDYYRE---ASGVMHKDLIARYIETQALLL 870
Query: 1194 CPVCPHVAEHVY-QLLGKDL-IQN 1215
P+ PH AE++Y ++LG +QN
Sbjct: 871 APIAPHFAEYIYREVLGNQTSVQN 894
Score = 286 bits (733), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/362 (44%), Positives = 208/362 (57%), Gaps = 53/362 (14%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
KF ++ +PYMNG +H GH F+LSK EFS+ F R+ GKR LFP GFHCTGMPI ACADKL
Sbjct: 58 KFMSSMAYPYMNGVMHAGHCFTLSKVEFSIGFERMNGKRALFPLGFHCTGMPILACADKL 117
Query: 149 KREMESFG-----FPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQI 203
KRE E FG P + E +KD +D K K KKSKA AK G KYQ++I
Sbjct: 118 KREAELFGKNFDNVPAEEEEIKEETPAEKDHEDVT---KFKAKKSKAAAKKGRGKYQFEI 174
Query: 204 MQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRW 263
M LG+ +EI KFADA +WL +FPPL D S+G +DWRR+F+TTD+NP++D+F+RW
Sbjct: 175 MLQLGIPREEIIKFADAKYWLTYFPPLCESDCTSLGARIDWRRSFVTTDANPYYDAFIRW 234
Query: 264 QFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLC 323
Q +L+ KIK+G+RYT++S +D Q CMDHDR SGEGV PQEY +K+ ++
Sbjct: 235 QMNKLKAAGKIKFGERYTIYSEKDGQACMDHDRQSGEGVTPQEYIGVKIEALEFADDAAK 294
Query: 324 CLD-------SKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFLVAATLRP 376
+D SK + VAATLRPETMYGQT +V P + Y DS
Sbjct: 295 IIDSSSDLDKSKKFYFVAATLRPETMYGQTCCFVSPTIEYGIFDAGDS------------ 342
Query: 377 ETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSARNMAYQGFTEVEGKINVLLRLTGQV 436
F+ TER+ +NM+YQ T G ++ + G+
Sbjct: 343 --------------------------YFITTERAFKNMSYQKLTPKRGFYKPIVTVPGKA 376
Query: 437 CI 438
I
Sbjct: 377 FI 378
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 139/232 (59%), Gaps = 39/232 (16%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLTFFIY H A++ + WP+GIRANGHL+LN++KMSKS GNF+TL + V+K
Sbjct: 689 GKDLIPNHLTFFIYTHVALFPKK--FWPKGIRANGHLMLNNSKMSKSTGNFMTLEQTVEK 746
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
F AD R+ AD+GD+VEDANF ES A
Sbjct: 747 ---------------------------------FGADAARIAFADAGDTVEDANFDESNA 773
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
+A ILRL+ EW +EI +S LRTG F D F EMN I++T + Y +K A
Sbjct: 774 NAAILRLFNLKEWAEEI-TKESNLRTGEITDFFDIAFEHEMNALIEKTYEQYALTNYKNA 832
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
L+ G F+ QAARD YRE A G MH+ L+ R++E QALLL P+ PH AE++
Sbjct: 833 LKYGLFDFQAARDYYRE---ASGVMHKDLIARYIETQALLLAPIAPHFAEYI 881
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Query: 434 GQVCIRSGDECVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEY 493
QV RSGD+C+V+L DQWY+DYGE +WK A +CL M + EV+ F L+WL +
Sbjct: 528 SQVMSRSGDDCIVSLEDQWYVDYGEESWKKQAIECLEGMQLFAPEVKNAFEGVLDWLKNW 587
Query: 494 ACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLT 553
A RTYGLGT+LPWDE++L+ESLSDSTIY ++YT+AHLL + E G L I A+ +T
Sbjct: 588 AVCRTYGLGTRLPWDEKYLVESLSDSTIYQSFYTIAHLLFKDYYGNEIG-PLGISADQMT 646
Query: 554 PEVWDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
EV+DY+ F+ +P L +RREF+Y+YP+D+ SGK
Sbjct: 647 DEVFDYI-FQHQDDVKNTNIPLPALQKLRREFEYFYPLDVSISGK 690
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 98/173 (56%), Gaps = 13/173 (7%)
Query: 1438 EHVEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEV 1497
EH EMN I++T + Y +K AL+ G F+ QAARD YRE A G MH+ L+ R++E
Sbjct: 810 EH-EMNALIEKTYEQYALTNYKNALKYGLFDFQAARDYYRE---ASGVMHKDLIARYIET 865
Query: 1498 QALLLCPVCPHVAEHVY-QLLGKKGSIVKARWPEGG-PIDDILVRSSSYLMEAAHAFRLQ 1555
QALLL P+ PH AE++Y ++LG + S+ A++P P+D ++ + YL + R +
Sbjct: 866 QALLLAPIAPHFAEYIYREVLGNQTSVQNAKFPRASKPVDKGVLAALDYLRNLQRSIR-E 924
Query: 1556 VKNHILTASKKKGKKVGGGGVGLVEKPTHATVWVAKTFPPWQSIVLTTMKQMM 1608
+ L K K ++ KP T+ ++++FP WQS + ++++
Sbjct: 925 GEGQALKKKKGKSAEIDAS------KPVKLTLLISESFPEWQSQCVEIVRKLF 971
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%), Gaps = 4/45 (8%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNAL 643
+ T+LPWDE++L+ESLSDSTIY ++YT+AHLL F+ GN +
Sbjct: 595 LGTRLPWDEKYLVESLSDSTIYQSFYTIAHLL----FKDYYGNEI 635
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 88/215 (40%), Gaps = 42/215 (19%)
Query: 606 DEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNINCVIVFQVLPYDPVPIIQVP 665
D +I+S SD +Y VA L+ T G+ C V + Y +
Sbjct: 291 DAAKIIDSSSDLDKSKKFYFVAATLRPETMYGQT-------CCFVSPTIEYG------IF 337
Query: 666 EYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQEVKKLLQ 725
+ G+ +T K S ++L +GFY I+ V GK
Sbjct: 338 DAGDSYFITTERAFKNMSY---------QKLTPKRGFYKPIVTV---PGKA--------- 376
Query: 726 KKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPF 785
IG + AP + + + LPM ++ KGTG+VT VPS+SPDDY DL KP
Sbjct: 377 ----FIGTKIHAPQSVYPELRILPMETVIATKGTGVVTCVPSNSPDDYITTKDLLHKP-- 430
Query: 786 REKYHVTDEMCVVALCDQWYLD-YGEPTWKAAAEQ 819
E Y + E + + + YG+ T KA E+
Sbjct: 431 -EYYGIKPEWIDHEIVPIMHTEKYGDLTAKAIVEE 464
>sp|P10857|SYLC_NEUCR Leucine--tRNA ligase, cytoplasmic OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=leu-6 PE=3 SV=2
Length = 1123
Score = 323 bits (829), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 219/610 (35%), Positives = 309/610 (50%), Gaps = 127/610 (20%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
V +I+ P +L A + +KLKI S D +L EAKEL Y +GFY GIM G+FKG+KV+
Sbjct: 465 VSVIKTPT-SDLLAPYLVKKLKINSPKDAKQLLEAKELAYKEGFYQGIMNYGDFKGEKVE 523
Query: 719 EVK-KLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALV 777
K K+ Q+ ID + Y+ P E+K V S S D+
Sbjct: 524 TAKPKVRQQLID----------AGDAFAYSEP-----ENK-------VVSRSGDE----- 556
Query: 778 DLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLAN-----MNTYHDEVR 832
C VAL DQWY+DYGE +W+ + N +NTY+ + +
Sbjct: 557 ------------------CSVALMDQWYIDYGEDSWRTVLYDYVENKDGKGINTYYADTQ 598
Query: 833 RNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGE 892
F + WL ++AC+RTYGLG+KLPWD +L+ESLSDST+YMAYYTVAH L F E
Sbjct: 599 HAFKGVIGWLKQWACARTYGLGSKLPWDPNFLVESLSDSTVYMAYYTVAHWLHRDLFGRE 658
Query: 893 NGNALNIKAEDLTPEVWDYVFFK---AAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSG 949
G NI A+ + EVWDY+F + + K +PK LD MRREFQY+YP+D+R SG
Sbjct: 659 KGKG-NIGADQMIDEVWDYIFCRTELSDHLVTKSGIPKETLDSMRREFQYFYPLDIRVSG 717
Query: 950 KDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDL 1009
KDLI NHLTF++Y H A++ E WP+ +RANGHL LN K + ++ F D+
Sbjct: 718 KDLIPNHLTFWLYNHIALF--PREYWPKSVRANGHLQLNGEK-MSKSTGNFMT---LDDV 771
Query: 1010 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSAD 1069
++ + + A GD GI S+ NF+
Sbjct: 772 VKKYGADAARVALADAGD-------GI---------------SDSNFV------------ 797
Query: 1070 GMRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVF 1129
E +AD ILR YT EW++E L +S LRTG +SF D +F
Sbjct: 798 -------------------EDVADNTILRFYTNKEWIEETLKDES-LRTGELNSFQDALF 837
Query: 1130 LSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEG-GMHRTLVLRFVEV 1188
+EMN + E HY + +K AL+ ++ ARD YRE AA G +H+ LV +++ +
Sbjct: 838 DNEMNALVNEARKHYEETSYKLALKAAHYDFLNARDMYREACAAAGIPLHKDLVTKYIRL 897
Query: 1189 QALLLCPVCPHVAEHVYQ-LLGKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLL 1247
QAL++ P+ PH A++V+Q LG+ I A W + P P A ++
Sbjct: 898 QALVITPIAPHWADYVWQECLGEPK---------SIQFARWPEVPAANPALTAARDYVRT 948
Query: 1248 NSAKMSKSEG 1257
S+ ++ +E
Sbjct: 949 TSSAINSAEA 958
Score = 316 bits (810), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 184/447 (41%), Positives = 240/447 (53%), Gaps = 81/447 (18%)
Query: 2 ERKGTFKVEYLQKIEKEVQEEWDREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLG 61
E KGT K + L +IEK Q++W++E ++E +P +T FP
Sbjct: 23 ELKGTEKRDTLIEIEKRYQQKWEQEGVFE-------VDAP-----STAEFPL-------- 62
Query: 62 HTFSLSKFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFN 121
+ + R+K KFF T +PYMNGRLH GH FS SK E+ F
Sbjct: 63 DAITPDELRQK--------------HPKFFGTIAYPYMNGRLHAGHAFSFSKIEYHTGFA 108
Query: 122 RLKGKRVLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKD 181
R++GKR LFP G+HCTG+PIKA ADKL +E+E FG + ED + K
Sbjct: 109 RMQGKRALFPQGYHCTGLPIKASADKLVKEIEMFGQEFERYKEDEVVEGAAPAAAAAPKT 168
Query: 182 KS-----KGKKSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLR 236
K KK K VAK G AKYQ+QI++SLG+ EI KFAD +WL +FPP +DL
Sbjct: 169 KEDLTKFNAKKGKTVAKTGGAKYQFQILKSLGIPVSEIHKFADPQYWLHYFPPECKKDLT 228
Query: 237 SIGIHVDWRRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDR 296
+ G +DWRR F+TTD+NP++D+FVRWQ RL + +KIK+GKRYT++S +D QPCMDHDR
Sbjct: 229 NFGARIDWRRQFVTTDANPYYDAFVRWQMNRLLELNKIKFGKRYTIYSIKDGQPCMDHDR 288
Query: 297 ASGEGVGPQEYTLIKMRLVKPYPAKLCCLDSK-----PVFLVAATLRPETMYGQTNAWVR 351
+ GEGV PQEYT +K+++ + P L K V+L ATLRPETMYGQ
Sbjct: 289 SEGEGVLPQEYTALKLKVTEWAPKAAEALKGKLPEGANVYLCPATLRPETMYGQ------ 342
Query: 352 PDMAYIALSCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSA 411
+ C +V P + Y F A E FV TER+A
Sbjct: 343 -------VCC------------------------FVGPALKYGVFKAAENEYFVITERAA 371
Query: 412 RNMAYQGFTEVEGKINVLLRLTGQVCI 438
+NMAYQG E EG I + G I
Sbjct: 372 KNMAYQGIFEKEGVIEKAADIVGSDLI 398
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 138/236 (58%), Gaps = 37/236 (15%)
Query: 1206 QLLGKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEA 1265
++ GKDLI NHLTF++Y H A++ E WP+ +RANGHL LN KMSKS GNF+TL
Sbjct: 714 RVSGKDLIPNHLTFWLYNHIALF--PREYWPKSVRANGHLQLNGEKMSKSTGNFMTL--- 768
Query: 1266 VKKFSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVE 1325
D VKK+ AD R+ LAD+GD + D+NFVE
Sbjct: 769 ------------------------------DDVVKKYGADAARVALADAGDGISDSNFVE 798
Query: 1326 SMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLF 1385
+AD ILR YT EW++E L +S LRTG +SF D +F +EMN + E HY + +
Sbjct: 799 DVADNTILRFYTNKEWIEETLKDES-LRTGELNSFQDALFDNEMNALVNEARKHYEETSY 857
Query: 1386 KEALRTGFFELQAARDKYRELTAAEG-GMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
K AL+ ++ ARD YRE AA G +H+ LV +++ +QAL++ P+ PH A++V
Sbjct: 858 KLALKAAHYDFLNARDMYREACAAAGIPLHKDLVTKYIRLQALVITPIAPHWADYV 913
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 114/172 (66%), Gaps = 9/172 (5%)
Query: 435 QVCIRSGDECVVALCDQWYLDYGEPTWKAAAEQCLAN-----MNTYHDEVRRNFGASLNW 489
+V RSGDEC VAL DQWY+DYGE +W+ + N +NTY+ + + F + W
Sbjct: 548 KVVSRSGDECSVALMDQWYIDYGEDSWRTVLYDYVENKDGKGINTYYADTQHAFKGVIGW 607
Query: 490 LHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKA 549
L ++AC+RTYGLG+KLPWD +L+ESLSDST+YMAYYTVAH L F E G NI A
Sbjct: 608 LKQWACARTYGLGSKLPWDPNFLVESLSDSTVYMAYYTVAHWLHRDLFGREKGKG-NIGA 666
Query: 550 EDLTPEVWDYVFFK---SAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
+ + EVWDY+F + S K +PK LD MRREFQY+YP+D+R SGK
Sbjct: 667 DQMIDEVWDYIFCRTELSDHLVTKSGIPKETLDSMRREFQYFYPLDIRVSGK 718
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 729 DIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPF 785
D+IG + AP++ H +Y LPM ++ KGTG+VTSVPSDSPDD A + +L KKP F
Sbjct: 396 DLIGTLVNAPLSVHKEVYVLPMDTVLATKGTGVVTSVPSDSPDDCAMMTELAKKPEF 452
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNA 642
+ +KLPWD +L+ESLSDST+YMAYYTVAH L F E G
Sbjct: 619 LGSKLPWDPNFLVESLSDSTVYMAYYTVAHWLHRDLFGREKGKG 662
>sp|C4V8L1|SYLC_NOSCE Probable leucine--tRNA ligase, cytoplasmic OS=Nosema ceranae
(strain BRL01) GN=NCER_100842 PE=3 SV=1
Length = 884
Score = 317 bits (811), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 195/555 (35%), Positives = 277/555 (49%), Gaps = 104/555 (18%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
K+F TFP+PYMNG+LHLGH +S+SK +F + L+G VLFP FHCTGMPI A A KL
Sbjct: 32 KYFITFPYPYMNGKLHLGHLYSISKADFMSYYKELQGFNVLFPLAFHCTGMPIAALAKKL 91
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
E+E GKK+ K +I+Q+LG
Sbjct: 92 GEELE-------------------------------GKKTDISTK--------EIIQNLG 112
Query: 209 LEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRL 268
D + F D HW+ FP L + L++ G ++DWRR+F+TTD N ++DSFVRWQF L
Sbjct: 113 FND--VMPFTDPVHWIKTFPKLCISSLKTFGANIDWRRSFVTTDINKYYDSFVRWQFFNL 170
Query: 269 RDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRL------------VK 316
++ + +GKR++++ P D Q C+DHDR GE + P + K L K
Sbjct: 171 KELGYLSFGKRHSIYCPLDKQMCLDHDRRKGENIKPVRQIMFKFHLHDKILLVRQNSIGK 230
Query: 317 PYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFLVAATLRP 376
PY KL C S L + + + ++ Y ++ + K +++ L+
Sbjct: 231 PY--KLVCGKS----LEVVSFKYNNTSFLAEKIIFDNLKY-QINNVKYKESLVLSMDLKD 283
Query: 377 ETMYGQTNAWVR---PDMAYIAFTTATGEVFVCTERSARN----------MAYQGFTEVE 423
Y TN V ++ + T + E A N + +G E
Sbjct: 284 GLTYDGTNIEVEVIEKNILVVKTDTKSDVELYEKEIKALNEIEETLFTLSTSSEGIVESV 343
Query: 424 GKINV-----LLRLTG----------QVCIRSGDECVVALCDQWYLDYGEPTWKAAAEQC 468
K++V LL T +V RSG CVV+L DQWY+DY WK+ ++C
Sbjct: 344 AKLSVENTKDLLVQTKHFISVYIPEKEVISRSGGICVVSLLDQWYIDYSNEKWKSKVKKC 403
Query: 469 LANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTV 528
L N+ D R A ++W++++ SR++GLGTK+PWD Q+LI+SLSDSTIYMA+YTV
Sbjct: 404 LDNLECGPD-TRSMLYAGIDWVNKWGFSRSFGLGTKIPWDTQYLIDSLSDSTIYMAFYTV 462
Query: 529 AHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKSAPFPPKCRVPK--AKLDIM---RR 583
HLL F G + L+ +VWDY+ F K VP+ LD++ R
Sbjct: 463 KHLL----FEDLEGKLEIFPSNKLSNDVWDYI------FAGKDLVPELYGYLDLLEKCRN 512
Query: 584 EFQYWYPVDLRCSGK 598
FQY+YPVDLR SGK
Sbjct: 513 NFQYFYPVDLRVSGK 527
Score = 230 bits (586), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 243/500 (48%), Gaps = 80/500 (16%)
Query: 670 LCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGF-YDGIMLVGEFKGKKVQEVKKLLQKKI 728
L +++ LK Q N K K + G YDG + E K + VK + +
Sbjct: 253 LAEKIIFDNLKYQINNVKYKESLVLSMDLKDGLTYDGTNIEVEVIEKNILVVKTDTKSDV 312
Query: 729 DIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKK-----P 783
++ +KA ++TL S GIV SV S ++ L+ K
Sbjct: 313 ELYEKEIKALNEIEETLFTLSTSS------EGIVESVAKLSVENTKDLLVQTKHFISVYI 366
Query: 784 PFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLH 843
P +E + +CVV+L DQWY+DY WK+ ++CL N+ D R A ++W++
Sbjct: 367 PEKEVISRSGGICVVSLLDQWYIDYSNEKWKSKVKKCLDNLECGPD-TRSMLYAGIDWVN 425
Query: 844 EYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAED 903
++ SR++GLGTK+PWD Q+LI+SLSDSTIYMA+YTV HLL F G +
Sbjct: 426 KWGFSRSFGLGTKIPWDTQYLIDSLSDSTIYMAFYTVKHLL----FEDLEGKLEIFPSNK 481
Query: 904 LTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQNHLTFFIYI 963
L+ +VWDY+F P+ L+ R FQY+YPVD
Sbjct: 482 LSNDVWDYIF-AGKDLVPELYGYLDLLEKCRNNFQYFYPVD------------------- 521
Query: 964 HTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHLTFFIYIHTA 1023
+R +G DLI+NHL FF++ H A
Sbjct: 522 ---------------LRVSG-----------------------KDLIKNHLLFFMFNHVA 543
Query: 1024 IWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLCLADSGDSVE 1083
++ ++ WP+ I NGHL+LN KMSKS GNFL++ +A+ K+ R+CLA GD+ +
Sbjct: 544 LFDEK--YWPKRIFTNGHLMLNKEKMSKSTGNFLSVDDALLKYGKSATRMCLAVCGDTND 601
Query: 1084 DANFVESMADAGILRLYTFIEWVK---EILATQSTLRTGSQDSFNDKVFLSEMNLKIKET 1140
DANFVE A+ IL++YTF++ ++ E++ +S T + S D + L +++ + E
Sbjct: 602 DANFVEDNANLFILKIYTFVKEIQKLNELVRKKSENETIASYSNADVLLLETVSVNVTEA 661
Query: 1141 EDHYTKMLFKEALRTGFFEL 1160
+ Y M + + ++ FFE+
Sbjct: 662 LNAYNSMKYSDVVKFSFFEM 681
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 38/191 (19%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI+NHL FF++ H A++ ++ WP+ I NGHL+LN KMSKS GNFL++ +A+ K
Sbjct: 526 GKDLIKNHLLFFMFNHVALFDEK--YWPKRIFTNGHLMLNKEKMSKSTGNFLSVDDALLK 583
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ R+CLA GD+ +DANFVE ++AN
Sbjct: 584 YGKSATRMCLAVCGDTNDDANFVE--------------------------DNANLF---- 613
Query: 1329 DAGILRLYTFIEWVK---EILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLF 1385
IL++YTF++ ++ E++ +S T + S D + L +++ + E + Y M +
Sbjct: 614 ---ILKIYTFVKEIQKLNELVRKKSENETIASYSNADVLLLETVSVNVTEALNAYNSMKY 670
Query: 1386 KEALRTGFFEL 1396
+ ++ FFE+
Sbjct: 671 SDVVKFSFFEM 681
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLL 630
+ TK+PWD Q+LI+SLSDSTIYMA+YTV HLL
Sbjct: 435 LGTKIPWDTQYLIDSLSDSTIYMAFYTVKHLL 466
>sp|B7XHP6|SYLC_ENTBH Probable leucine--tRNA ligase, cytoplasmic OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_21702 PE=3 SV=1
Length = 860
Score = 293 bits (751), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 276/584 (47%), Gaps = 72/584 (12%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
KFF TFP+PYMNG+LHLGH FS+SK + + ++G VLFPFGFHCTGMPI A A KL
Sbjct: 33 KFFITFPYPYMNGKLHLGHLFSISKADIFSYYKEMQGFNVLFPFGFHCTGMPISASAKKL 92
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
K E+ + G + D V KS G K K +
Sbjct: 93 KMELANEG---------------EIDISVVNILKSLGFKLYCSGKCTNV----------- 126
Query: 209 LEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRL 268
+ I +F D HW FP L ++DWRR+FITTD NP++DSFV++QF +L
Sbjct: 127 ---ECICQFTDPFHWCRTFPKYCKASLVKYDANIDWRRSFITTDVNPYYDSFVKYQFTKL 183
Query: 269 RDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDSK 328
++ + I +GKRY++F P DNQ C+DHDR GEGV KP P L L +
Sbjct: 184 KNCNYISFGKRYSIFCPVDNQICLDHDRRKGEGV-------------KPIPIVLAILGNN 230
Query: 329 PVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFLVAATLRPETMYGQTNAW-- 386
+ V + + ++ +I S + V++ + Y N +
Sbjct: 231 ILVPVQEKDLNTIIDNNVEIVTQKEIQWIQFSI--NNDVYVAEEDIYNNIKYQVENVYKI 288
Query: 387 -------VRPDMAYIAFTTATGEVFVCTERSARNMAYQGFTEVEGKINVLLRLTGQVCI- 438
+ P + Y+ ++ + N+ + + K+ ++ VC
Sbjct: 289 KTVTLDGLYPYIIYVNSNIRKSKINNKNKILTENIYNKLIADRHEKMELIKYDKFIVCYV 348
Query: 439 -------RSGDECVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLH 491
RSG +C VAL DQW+LDY P WK + CL + T + + +LNW++
Sbjct: 349 PEDTVISRSGGKCTVALMDQWFLDYSNPEWKEKTKICLNKL-TASKDTKEKLELALNWIN 407
Query: 492 EYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAED 551
++ SR +GLGTK P+D LI+SLSDSTIYMA+YTV HLL F+ G +
Sbjct: 408 KWGFSRNFGLGTKFPYDNSVLIDSLSDSTIYMAFYTVKHLL----FKDLEGKEPLFPIKY 463
Query: 552 LTPEVWDYVFFKSAP---FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK--VSTKLPWD 606
+ W+YVF S P K ++ R +F Y+YP+DLR SGK ++ L +
Sbjct: 464 MGYAFWEYVFGNSNEINFIDPNDLNAKKIVEDARSQFNYFYPIDLRVSGKDLINNHLIFF 523
Query: 607 EQWLIESLSDSTIYMAYYTVAHLLQGG-TFRGENGNALNINCVI 649
+ ++ YT HLL G GN L+++ +
Sbjct: 524 LMNHVAIFKENNWPKRIYTNGHLLLNGLKMSKSEGNFLSVDTAL 567
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 196/411 (47%), Gaps = 72/411 (17%)
Query: 796 CVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGT 855
C VAL DQW+LDY P WK + CL + T + + +LNW++++ SR +GLGT
Sbjct: 361 CTVALMDQWFLDYSNPEWKEKTKICLNKL-TASKDTKEKLELALNWINKWGFSRNFGLGT 419
Query: 856 KLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFK 915
K P+D LI+SLSDSTIYMA+YTV HLL F+ G + + W+YVF
Sbjct: 420 KFPYDNSVLIDSLSDSTIYMAFYTVKHLL----FKDLEGKEPLFPIKYMGYAFWEYVFGN 475
Query: 916 AAPF---PPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQNHLTFFIYIHTAIWGDEP 972
+ P K ++ R +F Y+YP+DLR SGK
Sbjct: 476 SNEINFIDPNDLNAKKIVEDARSQFNYFYPIDLRVSGK---------------------- 513
Query: 973 EMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHLTFFIYIHTAIWGDEPEMW 1032
DLI NHL FF + NH+ F + W
Sbjct: 514 -------------------DLINNHLIFF--------LMNHVAIF----------KENNW 536
Query: 1033 PRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLCLADSGDSVEDANFVESMA 1092
P+ I NGHLLLN KMSKSEGNFL++ A+++F R+CLA GD+ EDANFVESMA
Sbjct: 537 PKRIYTNGHLLLNGLKMSKSEGNFLSVDTALERFGTSATRMCLAICGDTNEDANFVESMA 596
Query: 1093 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1152
++ +L+LYT + + I + ++ + D +S + + ++T Y +++++
Sbjct: 597 NSFVLKLYTLSQNIFLISSNNQSVNVADY-TLIDYYLISSIKINEEKTFTSYENIVYRDV 655
Query: 1153 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEH 1203
++ GF+ + Y + + ++ L PV P +A +
Sbjct: 656 IKYGFYNNLDTIETYEMFGGSNSNLKHWAYYNMMK----QLYPVIPSLARY 702
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 40/231 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHL FF+ H AI+ + WP+ I NGHLLLN KMSKSEGNFL++
Sbjct: 512 GKDLINNHLIFFLMNHVAIFKENN--WPKRIYTNGHLLLNGLKMSKSEGNFLSV------ 563
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
D A+++F R+CLA GD+ EDANFVESMA
Sbjct: 564 ---------------------------DTALERFGTSATRMCLAICGDTNEDANFVESMA 596
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
++ +L+LYT + + I + ++ + D +S + + ++T Y +++++
Sbjct: 597 NSFVLKLYTLSQNIFLISSNNQSVNVADY-TLIDYYLISSIKINEEKTFTSYENIVYRDV 655
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEH 1439
++ GF+ + Y + + ++ L PV P +A +
Sbjct: 656 IKYGFYNNLDTIETYEMFGGSNSNLKHWAYYNMMK----QLYPVIPSLARY 702
>sp|Q8SRS8|SYLC_ENCCU Probable leucine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU06_0280 PE=3 SV=1
Length = 874
Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/558 (32%), Positives = 262/558 (46%), Gaps = 97/558 (17%)
Query: 72 KIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFP 131
++ +T+ D S KFF TF +PYMNGRLHLGH FS+SK +F + L+G VLFP
Sbjct: 14 EVERDTISDV---SEKRKFFVTFTYPYMNGRLHLGHLFSISKADFFSYYKELQGYNVLFP 70
Query: 132 FGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAV 191
F FHCTGMPI A A KL E+ G+K
Sbjct: 71 FSFHCTGMPISASAKKLAEEL-------------------------------SGEKVDLS 99
Query: 192 AKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITT 251
K +I++ LG +D ++ F D HW+ FP L + L+ ++DWRR+FITT
Sbjct: 100 VK--------KIIEDLGFDD--VKPFTDPVHWVRTFPGLCERSLKRFHGNIDWRRSFITT 149
Query: 252 DSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIK 311
D N ++DSF++WQF RL + + +GKR+++F P D QPC+DHDR GE V P L K
Sbjct: 150 DINKYYDSFIKWQFNRLNELGHLSFGKRHSIFCPVDKQPCLDHDRRKGENVKPVGVVLCK 209
Query: 312 MRLVKPY---PAKLCCLDSKPVF-----LVAATLRPETMYGQTNAWVRPDMAYIALSCLD 363
+R + K C+ SK V + E + + + + D + +
Sbjct: 210 LRFSEGILLARIKQGCVPSKAVVGSRCDFIGFEYCNEKYFAEKDVFENVDAQASGICVRE 269
Query: 364 S---------------KPVFLVAATLRPETMYGQTNAWVRPDMA-YIAFTTATGEVFVCT 407
S K V A + T P +A YI T
Sbjct: 270 SVKGDFFGGRRFSGFGKEVVCDAIEKDVPCVVKGTQDKKDPSLAEYIKNEIELISKVEST 329
Query: 408 ERS-ARNMAYQGFTEVEGKINVLLRLTGQVCIRSGDECVVALCDQWYLDYGEPTWKAAAE 466
E A F E E ++ + +G CI VAL DQWY++Y +P WK +
Sbjct: 330 ETQLAETKDLLKFYEPEEEV---ISRSGGKCI-------VALTDQWYINYCDPEWKKKVK 379
Query: 467 QCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYY 526
+C+ N+ D+ R L W+ ++ SR++GLGT++PWD ++LI+SLSDSTIYMA Y
Sbjct: 380 RCIENL-VCTDDTRAILEDGLEWIGKWGFSRSFGLGTRIPWDSEYLIDSLSDSTIYMAMY 438
Query: 527 TVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKS------APFPPKCRVPKAKLDI 580
T H L +R G + L+ +VW+Y+F AP+ + L
Sbjct: 439 TFKHFL----YRDLEGKDELFPSNRLSDDVWNYIFLNRSITEDLAPY-------EEILSN 487
Query: 581 MRREFQYWYPVDLRCSGK 598
R F Y+YP+DLR GK
Sbjct: 488 CRESFNYFYPIDLRVGGK 505
Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 216/441 (48%), Gaps = 88/441 (19%)
Query: 779 LKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGAS 838
LK P E + C+VAL DQWY++Y +P WK ++C+ N+ D+ R
Sbjct: 340 LKFYEPEEEVISRSGGKCIVALTDQWYINYCDPEWKKKVKRCIENL-VCTDDTRAILEDG 398
Query: 839 LNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALN 898
L W+ ++ SR++GLGT++PWD ++LI+SLSDSTIYMA YT H L +R G
Sbjct: 399 LEWIGKWGFSRSFGLGTRIPWDSEYLIDSLSDSTIYMAMYTFKHFL----YRDLEGKDEL 454
Query: 899 IKAEDLTPEVWDYVFFK------AAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+ L+ +VW+Y+F AP+ + L R F Y+Y
Sbjct: 455 FPSNRLSDDVWNYIFLNRSITEDLAPY-------EEILSNCRESFNYFY----------- 496
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
P +R G DL++N
Sbjct: 497 -----------------------PIDLRVGG-----------------------KDLLKN 510
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
HL FF++ H A++ E + WP+ + NGHL+LNS KMSKS GN++T+ E++ KF R
Sbjct: 511 HLIFFLFNHVALF--EEKHWPKRMFTNGHLMLNSEKMSKSSGNYMTVDESLDKFGVSSTR 568
Query: 1073 LCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQS-------TLRTGSQDSFN 1125
+CLA GD EDANFVES A+A +L+LY++++ ++E+ +S ++ + F
Sbjct: 569 MCLAVCGDGNEDANFVESNANAFVLKLYSYVKMIEELCTGRSLNPCILDLMKGYGEMGFA 628
Query: 1126 DKVFLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRF 1185
D+ + +++ + + M +++ ++ GF+E+ A++ Y L GG + ++
Sbjct: 629 DRFLMQTISMNVAHATRAHEDMTYRDVVKYGFYEMVHAKEMYHIL----GGTNNEILFLL 684
Query: 1186 VEVQALLLCPVCPHVAEHVYQ 1206
+ LL P+ P +A ++ +
Sbjct: 685 CKAMTQLLYPIIPSLARYLIE 705
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 123/239 (51%), Gaps = 46/239 (19%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDL++NHL FF++ H A++ E + WP+ + NGHL+LNS KMSKS GN++T+ E++ K
Sbjct: 504 GKDLLKNHLIFFLFNHVALF--EEKHWPKRMFTNGHLMLNSEKMSKSSGNYMTVDESLDK 561
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
F R+CLA GD EDANFVES A+A V
Sbjct: 562 FGVSSTRMCLAVCGDGNEDANFVESNANAFV----------------------------- 592
Query: 1329 DAGILRLYTFIEWVKEILATQS-------TLRTGSQDSFNDKVFLSEMNLKIKETEDHYT 1381
L+LY++++ ++E+ +S ++ + F D+ + +++ + +
Sbjct: 593 ----LKLYSYVKMIEELCTGRSLNPCILDLMKGYGEMGFADRFLMQTISMNVAHATRAHE 648
Query: 1382 KMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
M +++ ++ GF+E+ A++ Y L GG + ++ + LL P+ P +A ++
Sbjct: 649 DMTYRDVVKYGFYEMVHAKEMYHIL----GGTNNEILFLLCKAMTQLLYPIIPSLARYL 703
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLL 630
+ T++PWD ++LI+SLSDSTIYMA YT H L
Sbjct: 413 LGTRIPWDSEYLIDSLSDSTIYMAMYTFKHFL 444
>sp|Q9YD97|SYL_AERPE Leucine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=leuS PE=3 SV=1
Length = 959
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 261/564 (46%), Gaps = 126/564 (22%)
Query: 657 DPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIML--VGEFKG 714
+P+ +I VP L V + ++SQ D++KL EA VY + FY+GIML G F G
Sbjct: 350 EPIQLIAVPRAEGLLVVEEVRRRGVESQMDREKLDEATREVYAREFYEGIMLETTGRFSG 409
Query: 715 KKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYA 774
KV E K+ + + ++ G AL+ IYTLP
Sbjct: 410 LKVAEAKEKVVEWLEERGAALR--------IYTLP------------------------- 436
Query: 775 ALVDLKKKPPFREKYHVTDEMCVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRR 833
+E Y V + DQW+L Y +P WKA A + +A M VRR
Sbjct: 437 -----------QEVYCRCGARTHVKIVEDQWFLLYSKPEWKALAREAVARMEFLPGHVRR 485
Query: 834 NFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 893
+F A + L ++A + LGT LPWD +W+IESLSDSTIYMAYYT+A Q +
Sbjct: 486 DFEAIIEALRDWAFTHKGELGTPLPWDREWVIESLSDSTIYMAYYTIAKYTQ-------H 538
Query: 894 GNALNIKAEDLTPEVWDYVFFKA---APFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 950
++ E LTPEV+DYVF A + +P+ L+ MRREF YWYP+D+R SGK
Sbjct: 539 PEKYGVEPEMLTPEVFDYVFLGAGDPGEVSRRSGIPQGLLEEMRREFLYWYPLDMRISGK 598
Query: 951 DLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLI 1010
DLI NHL FFI+ HTAI+ E+WPR I NG +L+ K +
Sbjct: 599 DLIPNHLVFFIFHHTAIFPR--ELWPRAIGVNGWVLVAGEK------------------M 638
Query: 1011 QNHLTFFIYIHTAI--WGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSA 1068
FI + A+ WG + W
Sbjct: 639 SKSKGNFILLRQALDWWGADATRW------------------------------------ 662
Query: 1069 DGMRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKV 1128
L ADSG ++DANF S+AD+ + L ++++V+E + ++ + D+
Sbjct: 663 -AEVLAGADSG--LDDANFEPSVADSAVSLLSQWLDFVRENYGRPAR----REERWVDRW 715
Query: 1129 FLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRT-LVLRFVE 1187
F S +N I + FK AL +++LQ + YR GG R L+ RF+E
Sbjct: 716 FESRLNSTIARVTRLMEEANFKTALVEAWYKLQ---ESYRWYLRRSGGEPREDLLRRFIE 772
Query: 1188 VQALLLCPVCPHVAEHVYQLLGKD 1211
VQ LL+ P PH AE ++ +G++
Sbjct: 773 VQTLLIAPFAPHTAEEAWEAMGRE 796
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 165/381 (43%), Gaps = 105/381 (27%)
Query: 68 KFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKR 127
K++E+ E + +A KFF TFP+PY+N HLG F++ + + R+ R++G
Sbjct: 10 KWQERWREARLFEADPQPGRRKFFITFPYPYVNAYPHLGSAFTILRVDIMARYKRMRGYN 69
Query: 128 VLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKK 187
VLFP G+H TG PI + A +++ + D +IK
Sbjct: 70 VLFPQGWHATGGPIVSSALRVR-----------------------EGDPRIIK------- 99
Query: 188 SKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRT 247
++ +G+ +++I +F D +W++ F +DL G+ +DWRR
Sbjct: 100 ---------------TLRDMGIPEEDIPRFRDPRYWVEFFTKAWRRDLERYGMSIDWRRE 144
Query: 248 FITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASG-EGVGPQE 306
F TT NP + F+ WQ+++LR++ + G+ V+ P++ + DHDR G+ PQE
Sbjct: 145 FYTTSLNPAYSRFIEWQYLKLREKGFVGKGRHPVVWCPKEQKVVGDHDRPDEYAGISPQE 204
Query: 307 YTLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKP 366
+IK R R + Y AL
Sbjct: 205 AVIIKFR------------------------------------GRDGLVYPAL------- 221
Query: 367 VFLVAATLRPETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSARNMAYQG-----FTE 421
T RPET++G TN WV PD Y+ E ++ E++AR +A QG
Sbjct: 222 ------TYRPETVFGVTNLWVHPDATYLVAEVDGEERWIIGEQAARELADQGHRVVILER 275
Query: 422 VEGKINVLLRLTGQVCIRSGD 442
+EG+ RL G++ + D
Sbjct: 276 IEGR-----RLLGRIVVNPAD 291
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 100/171 (58%), Gaps = 11/171 (6%)
Query: 432 LTGQVCIRSGDECVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWL 490
L +V R G V + DQW+L Y +P WKA A + +A M VRR+F A + L
Sbjct: 435 LPQEVYCRCGARTHVKIVEDQWFLLYSKPEWKALAREAVARMEFLPGHVRRDFEAIIEAL 494
Query: 491 HEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAE 550
++A + LGT LPWD +W+IESLSDSTIYMAYYT+A Q + ++ E
Sbjct: 495 RDWAFTHKGELGTPLPWDREWVIESLSDSTIYMAYYTIAKYTQ-------HPEKYGVEPE 547
Query: 551 DLTPEVWDYVFFKS---APFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
LTPEV+DYVF + + +P+ L+ MRREF YWYP+D+R SGK
Sbjct: 548 MLTPEVFDYVFLGAGDPGEVSRRSGIPQGLLEEMRREFLYWYPLDMRISGK 598
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 148/354 (41%), Gaps = 116/354 (32%)
Query: 9 VEYLQKIEKEVQEEWDREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSK 68
+E L+ +E++ QE W +++E R KFF TFP+PY+N HLG F
Sbjct: 1 MERLKAVEEKWQERWREARLFEADPQPGRR-----KFFITFPYPYVNAYPHLGSAF---- 51
Query: 69 FREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRV 128
++ + + R+ R++G V
Sbjct: 52 -----------------------------------------TILRVDIMARYKRMRGYNV 70
Query: 129 LFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKS 188
LFP G+H TG PI + A ++ ++ D +IK
Sbjct: 71 LFPQGWHATGGPIVSSALRV-----------------------REGDPRIIK-------- 99
Query: 189 KAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTF 248
++ +G+ +++I +F D +W++ F +DL G+ +DWRR F
Sbjct: 100 --------------TLRDMGIPEEDIPRFRDPRYWVEFFTKAWRRDLERYGMSIDWRREF 145
Query: 249 ITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASG-EGVGPQEY 307
TT NP + F+ WQ+++LR++ + G+ V+ P++ + DHDR G+ PQE
Sbjct: 146 YTTSLNPAYSRFIEWQYLKLREKGFVGKGRHPVVWCPKEQKVVGDHDRPDEYAGISPQEA 205
Query: 308 TLIKMR----LVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYI 357
+IK R LV P A T RPET++G TN WV PD Y+
Sbjct: 206 VIIKFRGRDGLVYP----------------ALTYRPETVFGVTNLWVHPDATYL 243
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 117/239 (48%), Gaps = 49/239 (20%)
Query: 1206 QLLGKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEA 1265
++ GKDLI NHL FFI+ HTAI+ E +WPR I NG +L+ KMSKS+GNF+ L +A
Sbjct: 594 RISGKDLIPNHLVFFIFHHTAIFPRE--LWPRAIGVNGWVLVAGEKMSKSKGNFILLRQA 651
Query: 1266 VKKFSADGMR----LCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDA 1321
+ + AD R L ADSG ++DANF S+AD+AV S
Sbjct: 652 LDWWGADATRWAEVLAGADSG--LDDANFEPSVADSAVSLLS------------------ 691
Query: 1322 NFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYT 1381
++++V+E + ++ + D+ F S +N I
Sbjct: 692 ---------------QWLDFVRENYGRPAR----REERWVDRWFESRLNSTIARVTRLME 732
Query: 1382 KMLFKEALRTGFFELQAARDKYRELTAAEGGMHRT-LVLRFVEVQALLLCPVCPHVAEH 1439
+ FK AL +++LQ + YR GG R L+ RF+EVQ LL+ P PH AE
Sbjct: 733 EANFKTALVEAWYKLQ---ESYRWYLRRSGGEPREDLLRRFIEVQTLLIAPFAPHTAEE 788
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 597 GKVSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQ 631
G++ T LPWD +W+IESLSDSTIYMAYYT+A Q
Sbjct: 503 GELGTPLPWDREWVIESLSDSTIYMAYYTIAKYTQ 537
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 1458 FKEALRTGFFELQAARDKYRELTAAEGGMHRT-LVLRFVEVQALLLCPVCPHVAEHVYQL 1516
FK AL +++LQ + YR GG R L+ RF+EVQ LL+ P PH AE ++
Sbjct: 736 FKTALVEAWYKLQ---ESYRWYLRRSGGEPREDLLRRFIEVQTLLIAPFAPHTAEEAWEA 792
Query: 1517 LGKKGSIVKARWPE 1530
+G++G A WPE
Sbjct: 793 MGREGFASTASWPE 806
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 745 IYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKP 783
+ LP +R D GTG+V SVP+ +P DY AL++LK++P
Sbjct: 295 VPVLPASFVRPDLGTGVVMSVPAHAPYDYVALMELKRRP 333
>sp|A4WHK6|SYL_PYRAR Leucine--tRNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514 /
JCM 11321) GN=leuS PE=3 SV=1
Length = 945
Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 176/572 (30%), Positives = 263/572 (45%), Gaps = 132/572 (23%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+P+I+V YG A V E+++I+SQ D L+EA + VY + G+M
Sbjct: 335 IPLIKVEGYGEYPAKDVVERMEIKSQTDP-ALEEATKEVYSAEYARGVMR---------- 383
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSV-IYTL-----PMLSIRE-------DKGTGIVTSV 765
+ ++++G L P S + ++ + P+ RE + G G V
Sbjct: 384 ------EDVVELVGRHLPEPARSMVMAVFKMYFAGRPVREAREFISKWLAEAGLGGV--- 434
Query: 766 PSDSPDDYAALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMN 825
+ D+ KP + E+ V L DQW+++YGEP WK A++ + M
Sbjct: 435 ----------MYDIMNKPVY---CRCGTEIVVKVLEDQWFINYGEPRWKELAKKLVEEMT 481
Query: 826 TYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQ 885
E + F A+++WL + AC+RT GLGT LPW W+IESLSDSTIYMAYY V
Sbjct: 482 IVPPEAKAQFFATIDWLDKRACARTRGLGTPLPWSHGWVIESLSDSTIYMAYYAVIK--- 538
Query: 886 GGTFRGENGNALNIKAEDLTPEVWDYVFFKAAP---FPPKCRVPKAKLDIMRREFQYWYP 942
G R N++ E LT E WDYVF K +P L +R EF++WYP
Sbjct: 539 -GIRRH------NLRPEQLTEEFWDYVFLGVGTPEEVSAKTGIPAEALRAIREEFEFWYP 591
Query: 943 VDLRCSGKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFI 1002
+D R NS KDLI NHLT
Sbjct: 592 LDSR-----------------------------------------NSGKDLIPNHLT--- 607
Query: 1003 YKLFSDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEA 1062
FFI+ H AI+ E WPR I ANG +L KMSKS+ N L L +A
Sbjct: 608 -------------FFIFNHVAIFPRE--KWPRQIVANGWVLREGEKMSKSKRNVLPLDKA 652
Query: 1063 VKKFSADGMRLCLADSGDSVEDANF--VESMADA-GILRLYTFIEWVKEILATQSTLRTG 1119
V+ + D +R LA S + +D +F E++ +A ++ +YT + + LA + R
Sbjct: 653 VEMYGPDPLRATLAISAEVEQDLDFRHAEAVRNAQQLMSIYT----LAQRLAQSAEDR-- 706
Query: 1120 SQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHR 1179
+ ++ D+ LSE+ L ++ D Y K+ ++A + ++ D Y +TA E
Sbjct: 707 -EPTWLDRWLLSEVALALERVRDAYEKVRVRQAAVELLYNIKNIFDSY--MTAVE--RPS 761
Query: 1180 TLVLRFVEVQALLLCPVCPHVAEHVYQLLGKD 1211
L + + A+ L P+ PH+AE V+ LLG +
Sbjct: 762 RLAVEVAKAWAVALEPIAPHLAEEVWSLLGGE 793
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 96/167 (57%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVV-ALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G E VV L DQW+++YGEP WK A++ + M E + F A+++WL + A
Sbjct: 443 VYCRCGTEIVVKVLEDQWFINYGEPRWKELAKKLVEEMTIVPPEAKAQFFATIDWLDKRA 502
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+RT GLGT LPW W+IESLSDSTIYMAYY V G R N++ E LT
Sbjct: 503 CARTRGLGTPLPWSHGWVIESLSDSTIYMAYYAVIK----GIRRH------NLRPEQLTE 552
Query: 555 EVWDYVFFKSAP---FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E WDYVF K +P L +R EF++WYP+D R SGK
Sbjct: 553 EFWDYVFLGVGTPEEVSAKTGIPAEALRAIREEFEFWYPLDSRNSGK 599
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 112/269 (41%), Gaps = 58/269 (21%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
KFF T +PY NG +H+GH + + RF+R G+ VLFP FH TG PI A+ +
Sbjct: 35 KFFITAAYPYPNGAIHIGHGRTYLIADVLARFHRHLGRAVLFPMAFHYTGTPILTIAEAI 94
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
AG + M G
Sbjct: 95 --------------------------------------------AAGDETVVEEYMAIYG 110
Query: 209 LEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRL 268
+ ++E+RK D + +F + + ++ G+ +DW R F T D P + F++WQF +L
Sbjct: 111 VPEEEMRKMGDPLYLARYFHEQSKRAMQKFGLSIDWTREFTTID--PEYQRFIQWQFEKL 168
Query: 269 RDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDSK 328
R + I G+ + PR + P HD + E+TLI D
Sbjct: 169 RKKGLIVRGRHPVGWCPRHSMPVGAHDTKDDKEPDIGEWTLIYF------------ADRD 216
Query: 329 PVFLVAATLRPETMYGQTNAWVRPDMAYI 357
+ AATLRPET+ G TN W+ P+ Y+
Sbjct: 217 GLIFPAATLRPETVLGVTNMWINPEGEYV 245
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 43/232 (18%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLTFFI+ H AI+ E WPR I ANG +L KMSKS+ N L L +AV+
Sbjct: 598 GKDLIPNHLTFFIFNHVAIFPRE--KWPRQIVANGWVLREGEKMSKSKRNVLPLDKAVEM 655
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ D +R LA S + +D +F ++V +A
Sbjct: 656 YGPDPLRATLAISAEVEQDLDF----------------------RHAEAVRNAQ------ 687
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
++ +YT + + LA + R + ++ D+ LSE+ L ++ D Y K+ ++A
Sbjct: 688 --QLMSIYT----LAQRLAQSAEDR---EPTWLDRWLLSEVALALERVRDAYEKVRVRQA 738
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ ++ D Y +TA E L + + A+ L P+ PH+AE V
Sbjct: 739 AVELLYNIKNIFDSY--MTAVE--RPSRLAVEVAKAWAVALEPIAPHLAEEV 786
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 1441 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1500
E+ L ++ D Y K+ ++A + ++ D Y +TA E L + + A+
Sbjct: 718 EVALALERVRDAYEKVRVRQAAVELLYNIKNIFDSY--MTAVE--RPSRLAVEVAKAWAV 773
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGP 1533
L P+ PH+AE V+ LLG +G + A+WP+ P
Sbjct: 774 ALEPIAPHLAEEVWSLLGGEGFVTSAKWPQLKP 806
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
+ T LPW W+IESLSDSTIYMAYY V ++ R E
Sbjct: 509 LGTPLPWSHGWVIESLSDSTIYMAYYAVIKGIRRHNLRPEQ 549
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 681 IQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQEVKKLLQKKIDIIGVALKAPVT 740
+ ++ D K+ +++ Y F + ++ E KG+ + +G ++ PVT
Sbjct: 245 VVAEYDGRKMVLSRDAAYRLSFQGSVKVLREAKGR-------------EFVGREVQNPVT 291
Query: 741 SHSV-IYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDL 779
V IY + + GTG+V SVP+ +P DYAAL D+
Sbjct: 292 GEWVPIYGAKFVDPK--VGTGVVMSVPAHAPYDYAALRDI 329
>sp|A0B7B7|SYL_METTP Leucine--tRNA ligase OS=Methanosaeta thermophila (strain DSM 6194 /
PT) GN=leuS PE=3 SV=1
Length = 950
Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 252/562 (44%), Gaps = 129/562 (22%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIM--LVGEFKGKK 716
+ +I VPEYG AV +L ++ QND K +EA +LVY + F++G++ + G + G
Sbjct: 348 ISLISVPEYGEFPAVDAVNELGVKDQNDP-KAEEATKLVYRREFHNGVLKEITGRYAGTP 406
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V +K +L + + GVA + Y E T ++ +
Sbjct: 407 VHRIKDILLQDLINQGVA--------EIFY--------EFSETPVICRCGA--------- 441
Query: 777 VDLKKKPPFREKYHVTDEMCVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNF 835
CVV + DQW+L+Y +P WK+ +CLA M +E+R F
Sbjct: 442 ------------------RCVVKMVRDQWFLEYSDPVWKSRVLECLAGMQIIPEEMRAEF 483
Query: 836 GASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGN 895
++WL + AC+R GLGT+LPWD +WLIESL+DSTIYMA+Y +A + G
Sbjct: 484 INKIDWLKDKACARRKGLGTRLPWDREWLIESLADSTIYMAFYILAKYVNAG-------- 535
Query: 896 ALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRR---EFQYWYPVDLRCSGKDL 952
+K + L P+ +DY+F + +D +RR +F+YWY
Sbjct: 536 ---MKIDRLVPQFFDYIFLGKGTPEEVSSLTGVDVDTVRRIREDFEYWY----------- 581
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
P +R +G DL+ N
Sbjct: 582 -----------------------PVDLRTSG-----------------------KDLVAN 595
Query: 1013 HLTFFIYIHTAIWGDEPE-MWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGM 1071
HL FF+Y H AI+ PE +WPR I NG + L KMSKS G LTL +AV + AD
Sbjct: 596 HLLFFLYHHVAIF---PESLWPRAIAVNGFVSLEGQKMSKSRGPILTLKQAVAENGADVT 652
Query: 1072 RLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLS 1131
RL + + + +DA++ A A ++ F +EI+ ++ + ++ + D+ LS
Sbjct: 653 RLYILANAEYTQDADWRNDGAQATRGQVERFYTLAREII-ERNDIDESAELTLIDRWMLS 711
Query: 1132 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1191
+ +I ET D + + AL++ F+ + +L E R + R + V
Sbjct: 712 RLQRRIIETTDALNNIQTRRALQSAFYHM------LNDLRWYERRGGRNQLRRILNVWVR 765
Query: 1192 LLCPVCPHVAEHVYQLLGKDLI 1213
L+ P PH+ E ++Q +G+ +
Sbjct: 766 LMAPFTPHICEEIWQNIGEGYV 787
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 436 VCIRSGDECVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G CVV + DQW+L+Y +P WK+ +CLA M +E+R F ++WL + A
Sbjct: 435 VICRCGARCVVKMVRDQWFLEYSDPVWKSRVLECLAGMQIIPEEMRAEFINKIDWLKDKA 494
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+R GLGT+LPWD +WLIESL+DSTIYMA+Y +A + G +K + L P
Sbjct: 495 CARRKGLGTRLPWDREWLIESLADSTIYMAFYILAKYVNAG-----------MKIDRLVP 543
Query: 555 EVWDYVFFKSAPFPPKCRVPKAKLDIMRR---EFQYWYPVDLRCSGK 598
+ +DY+F + +D +RR +F+YWYPVDLR SGK
Sbjct: 544 QFFDYIFLGKGTPEEVSSLTGVDVDTVRRIREDFEYWYPVDLRTSGK 590
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 136/292 (46%), Gaps = 66/292 (22%)
Query: 71 EKIYEETVGDAVRSSPDD--KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRV 128
++I+EE + PD KFF T P+PY+NG LH GHT + + + R++R+ G+ V
Sbjct: 16 QRIWEEE--GVFHAEPDSRKKFFLTIPYPYLNGNLHAGHTRTFTIGDAIARYHRMLGENV 73
Query: 129 LFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKS 188
LFP FH TG PI ++ + + DP+I
Sbjct: 74 LFPMAFHATGTPIVGLSELIA------------------------NRDPLI--------- 100
Query: 189 KAVAKAGSAKYQWQIMQSL-GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRT 247
W + L G+ ++E+ K +D+F A +RSIG +DWRR
Sbjct: 101 ------------WDVYTRLHGIPEEELEKLTTPEAIVDYFRKQAKLAMRSIGYSIDWRRE 148
Query: 248 FITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEY 307
F TTD P ++ F+ WQF LR++ + G + P D P DHD GE ++
Sbjct: 149 FTTTD--PAYNRFIEWQFGILREKGYVTKGSHPVRWCPNDQNPVEDHDILRGEDATILDF 206
Query: 308 TLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMA-YIA 358
TLIK R LD K L ATLRPET++G TN WV P++ YIA
Sbjct: 207 TLIKFR-----------LDDK--VLPCATLRPETVFGVTNLWVNPNVVHYIA 245
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 44/237 (18%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPE-MWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVK 1267
GKDL+ NHL FF+Y H AI+ PE +WPR I NG + L KMSKS G LTL +AV
Sbjct: 589 GKDLVANHLLFFLYHHVAIF---PESLWPRAIAVNGFVSLEGQKMSKSRGPILTLKQAVA 645
Query: 1268 KFSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESM 1327
+ AD RL + + + +DA++ A A +
Sbjct: 646 ENGADVTRLYILANAEYTQDADWRNDGAQATRGQ-------------------------- 679
Query: 1328 ADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKE 1387
+ R YT +EI+ ++ + ++ + D+ LS + +I ET D + +
Sbjct: 680 ----VERFYTL---AREII-ERNDIDESAELTLIDRWMLSRLQRRIIETTDALNNIQTRR 731
Query: 1388 ALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHVEMNL 1444
AL++ F+ + +L E R + R + V L+ P PH+ E + N+
Sbjct: 732 ALQSAFYHM------LNDLRWYERRGGRNQLRRILNVWVRLMAPFTPHICEEIWQNI 782
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Query: 592 DLRCSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGG 633
D C+ + + T+LPWD +WLIESL+DSTIYMA+Y +A + G
Sbjct: 492 DKACARRKGLGTRLPWDREWLIESLADSTIYMAFYILAKYVNAG 535
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 729 DIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREK 788
++IG + PVT +I LP + D G+GIV SVP+ +P DY AL DL K
Sbjct: 279 ELIGKKARNPVTGDEII-ILPATFVDPDSGSGIVMSVPAHAPLDYLALRDLYDAD--LSK 335
Query: 789 YHVTDEMCVVALCDQWYL-DYGE-PTWKAAAEQCLANMN 825
Y +T+++ + + +YGE P A E + + N
Sbjct: 336 YGITEDLRKIKFISLISVPEYGEFPAVDAVNELGVKDQN 374
>sp|Q58050|SYL_METJA Leucine--tRNA ligase OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=leuS PE=3 SV=2
Length = 942
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 170/564 (30%), Positives = 256/564 (45%), Gaps = 135/564 (23%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVG--EFKGKK 716
+P+I VP YG A + EK+ I+SQ ++DKL+EA + +Y F+ G++ +++G
Sbjct: 350 IPLINVPGYGKYPAKEIVEKMGIKSQEEEDKLEEATKKIYKDEFHKGVLNENCLDYEGIP 409
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V+E+K L K + G+A ++Y + GT
Sbjct: 410 VREIKDKLTKDLIDKGLA--------EIMYEFSEEKVICRCGTP---------------- 445
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNF 835
C+V + QW++ Y + WK A +C+ M + +R+ F
Sbjct: 446 -------------------CIVKMVKGQWFIKYSDEKWKELAHKCIDKMRFIPENLRQVF 486
Query: 836 GASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGN 895
++W+ + AC R GLGTK P++E W+IESLSDSTIY AYYTVA + N
Sbjct: 487 HEKIDWMKDKACVRRRGLGTKFPFEEGWVIESLSDSTIYPAYYTVAKYI----------N 536
Query: 896 ALNIKAEDLTPEVWDYVFFKAA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
NIK E LT E++DYVF + +PK ++ MR+EF Y+YPVD RCS
Sbjct: 537 QHNIKPEQLTLELFDYVFLGKGDVDKIAKETGIPKDIIEGMRKEFIYYYPVDWRCS---- 592
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
AKDLI NHLTF+I+ N
Sbjct: 593 -------------------------------------AKDLIPNHLTFYIF--------N 607
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
H+ F E WPRGI NG++ + K+SKS+G L + E +KF AD R
Sbjct: 608 HVAIF----------PEEFWPRGIVVNGYVTIEGKKLSKSKGPVLPVLEVAEKFGADVGR 657
Query: 1073 LCLADSGDSVEDAN--FVESMADAGIL-RLYTFIEWVKEILATQSTLRTGSQDSFNDKVF 1129
+ + +DA+ F E +L RLY F KEI + TG + S+ DK
Sbjct: 658 FYITTCAELPQDADIKFKEMENTKKVLERLYLF---AKEIAERRG--ETGEEFSYIDKWL 712
Query: 1130 LSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDK--YRELTAAEGGMHRTLVLRFVE 1187
LS + +K+ +++ ++A G Q D YR GG + ++ F+E
Sbjct: 713 LSRLYKAVKQYDEYMENFELRKA---GILLYQLLDDLKWYRR----RGGNNIRVLEEFLE 765
Query: 1188 VQALLLCPVCPHVAEHVYQLLGKD 1211
V L+ P PH+ E ++++LGK+
Sbjct: 766 VIIKLMMPFTPHLCEEMWEILGKE 789
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 97/168 (57%), Gaps = 14/168 (8%)
Query: 435 QVCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEY 493
+V R G C+V + QW++ Y + WK A +C+ M + +R+ F ++W+ +
Sbjct: 437 KVICRCGTPCIVKMVKGQWFIKYSDEKWKELAHKCIDKMRFIPENLRQVFHEKIDWMKDK 496
Query: 494 ACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLT 553
AC R GLGTK P++E W+IESLSDSTIY AYYTVA + N NIK E LT
Sbjct: 497 ACVRRRGLGTKFPFEEGWVIESLSDSTIYPAYYTVAKYI----------NQHNIKPEQLT 546
Query: 554 PEVWDYVFFKSA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E++DYVF + +PK ++ MR+EF Y+YPVD RCS K
Sbjct: 547 LELFDYVFLGKGDVDKIAKETGIPKDIIEGMRKEFIYYYPVDWRCSAK 594
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 122/276 (44%), Gaps = 60/276 (21%)
Query: 84 SSPDD--KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPI 141
++PDD KFF T FPY+NG LH GH + + E RF R+K K VL+ FG+H TG PI
Sbjct: 26 ANPDDREKFFITAAFPYLNGVLHAGHLRTFTIPEVVARFQRMKNKNVLWTFGYHVTGTPI 85
Query: 142 KACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQW 201
A+ +K E K W
Sbjct: 86 LGLAELIKNRDE--------------------------------------------KTIW 101
Query: 202 QIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFV 261
+ G+ +E+ + +++F A + + +G +DWRR F T D F+ F+
Sbjct: 102 AYTELHGIPKEELLELTTPEKIVEYFSKKAEEAFKRMGFSLDWRRNFKTDDK--VFNKFI 159
Query: 262 RWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAK 321
WQF +L+++ I G + PR + P DHD GE EY LIK + +
Sbjct: 160 EWQFHKLKEKGLIVKGSHPVRYCPRCDNPVEDHDILVGENATLVEYILIK------FTTE 213
Query: 322 LCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYI 357
C+ + ATLRPET++G TN WV P+ Y+
Sbjct: 214 DGCI------MPMATLRPETVFGVTNVWVNPEATYV 243
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 103/235 (43%), Gaps = 48/235 (20%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
KDLI NHLTF+I+ H AI+ +E WPRGI NG++ + K+SKS+G L + E +K
Sbjct: 593 AKDLIPNHLTFYIFNHVAIFPEE--FWPRGIVVNGYVTIEGKKLSKSKGPVLPVLEVAEK 650
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
F AD R + + +DA D F E
Sbjct: 651 FGADVGRFYITTCAELPQDA-------------------------------DIKFKEMEN 679
Query: 1329 DAGIL-RLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKE 1387
+L RLY F KEI + TG + S+ DK LS + +K+ +++ ++
Sbjct: 680 TKKVLERLYLF---AKEIAERRG--ETGEEFSYIDKWLLSRLYKAVKQYDEYMENFELRK 734
Query: 1388 ALRTGFFELQAARDK--YRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
A G Q D YR GG + ++ F+EV L+ P PH+ E +
Sbjct: 735 A---GILLYQLLDDLKWYRR----RGGNNIRVLEEFLEVIIKLMMPFTPHLCEEM 782
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
+ TK P++E W+IESLSDSTIY AYYTVA + + E
Sbjct: 504 LGTKFPFEEGWVIESLSDSTIYPAYYTVAKYINQHNIKPEQ 544
Score = 41.6 bits (96), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 14/74 (18%)
Query: 706 IMLVGEFKGKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSV 765
I ++ EFKG++ L+ KK+ K PVT V LP ++ + GTG V SV
Sbjct: 282 IEIIEEFKGEQ------LINKKV-------KNPVTGKEVP-ILPAKFVKTNIGTGCVMSV 327
Query: 766 PSDSPDDYAALVDL 779
P+ +P DY AL DL
Sbjct: 328 PAHAPYDYIALRDL 341
Score = 41.6 bits (96), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 1484 GGMHRTLVLRFVEVQALLLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGP--IDDILVRS 1541
GG + ++ F+EV L+ P PH+ E ++++LGK+G + A++PE I+D + +
Sbjct: 753 GGNNIRVLEEFLEVIIKLMMPFTPHLCEEMWEILGKEGFVSLAKFPEVKEEFINDEIEKG 812
Query: 1542 SSYL 1545
YL
Sbjct: 813 EEYL 816
>sp|Q8NKR7|SYL_PYRKO Leucine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918
/ JCM 12380 / KOD1) GN=leuS PE=3 SV=2
Length = 967
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 171/598 (28%), Positives = 266/598 (44%), Gaps = 138/598 (23%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+ +I + YG AV E+L ++SQ DK+KL++A + +Y ++ GI + + GK VQ
Sbjct: 362 ISLISLEGYGEFPAVEEAERLGVKSQKDKEKLEQATKNIYKAEYHKGIFKIEPYAGKPVQ 421
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTL---PMLSIREDKGTGIVTSVPSDSPDDYAA 775
EVK+L+ K++ G+A ++Y P++S
Sbjct: 422 EVKELVAKEMMEKGIA--------EIMYEFADKPVIS----------------------- 450
Query: 776 LVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNF 835
++ + + DQW++DYG P WKA A + LANM Y + R F
Sbjct: 451 --------------RFGNQAVIKIIHDQWFIDYGNPEWKAKAREALANMTIYPESRRAQF 496
Query: 836 GASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVA-HLLQGGTFRGENG 894
A ++WL + AC+R GLGT LPWD W+IESLSDSTIYMAYYT++ H+ Q R E
Sbjct: 497 EAVIDWLDKKACARKVGLGTPLPWDPDWVIESLSDSTIYMAYYTISRHINQ---LRKEG- 552
Query: 895 NALNIKAEDLTPEVWDYVFF------KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCS 948
+ AE L E +DY+F K K +P + M+ EF+YWYP+D RCS
Sbjct: 553 ---KLDAEKLDREFFDYIFREPFSEEKERKLSEKTGIPAETIHEMKEEFEYWYPLDWRCS 609
Query: 949 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSD 1008
KDLI NHLTFFI+ H AI+ + + WP+GI NG L K
Sbjct: 610 AKDLIPNHLTFFIFNHVAIF--DKKHWPKGIAVNGFGTLEGQK----------------- 650
Query: 1009 LIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSA 1068
++ G++L NF+ +A+++ A
Sbjct: 651 --------------------------MSKSKGNVL-----------NFI---DAIEENGA 670
Query: 1069 DGMRLCLADSGDSVEDANFVESMADAGILR--LYTFIEWVKEILATQSTLRTGSQDSFND 1126
D +RL + G + D++F + G LR + F E V E ++ + G + D
Sbjct: 671 DVVRLYIM--GLAEHDSDFDWRRKEVGKLRKQVERFYELVSEFATYEA--KEGVELKDID 726
Query: 1127 KVFLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-F 1185
+ L +N I+ + + A++ F+ + Y T + VLR
Sbjct: 727 RWMLHRLNKAIEGATKALEEFRTRTAVQWAFYTVLNDLRWYLRRTEGRDDDAKRYVLRTL 786
Query: 1186 VEVQALLLCPVCPHVAEHVYQLLGKDLIQNHLTFFIYIHTAIWGDE-PEMWPRGIRAN 1242
+V L+ P PH++E +++ LG + ++ A W + PE W + A
Sbjct: 787 ADVWVRLMAPFTPHISEELWEKLGGEG---------FVSLAPWPEPVPEWWNETVEAE 835
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 102/171 (59%), Gaps = 15/171 (8%)
Query: 436 VCIRSGDECVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G++ V+ + DQW++DYG P WKA A + LANM Y + R F A ++WL + A
Sbjct: 448 VISRFGNQAVIKIIHDQWFIDYGNPEWKAKAREALANMTIYPESRRAQFEAVIDWLDKKA 507
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVA-HLLQGGTFRGENGNALNIKAEDLT 553
C+R GLGT LPWD W+IESLSDSTIYMAYYT++ H+ Q R E + AE L
Sbjct: 508 CARKVGLGTPLPWDPDWVIESLSDSTIYMAYYTISRHINQ---LRKEG----KLDAEKLD 560
Query: 554 PEVWDYVFF------KSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E +DY+F K K +P + M+ EF+YWYP+D RCS K
Sbjct: 561 REFFDYIFREPFSEEKERKLSEKTGIPAETIHEMKEEFEYWYPLDWRCSAK 611
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 122/271 (45%), Gaps = 53/271 (19%)
Query: 87 DDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACAD 146
+ KF+ T FPY++G LH+GH + + + RF R++G VLFP G+H TG PI A+
Sbjct: 33 EKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMGWHITGAPIVGIAE 92
Query: 147 KLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQS 206
++K + +P+T + +D K
Sbjct: 93 RIK---------------NRDPKTIH-----IYRDVYK---------------------- 110
Query: 207 LGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFM 266
+ ++ + KF D + +F A + G VDW R F TT P F F+ WQF
Sbjct: 111 --VPEEILWKFEDPKEIVKYFMKAAKETFIRAGFSVDWTREFHTTSLFPPFSKFIEWQFW 168
Query: 267 RLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLD 326
L+D + G + P P DHD GE V EY +IK L + +
Sbjct: 169 TLKDMGLVVKGAHRVRWDPVVGTPLGDHDIMEGEDVQILEYVIIKFILEE---------N 219
Query: 327 SKPVFLVAATLRPETMYGQTNAWVRPDMAYI 357
+ ++L AATLRPET+YG TN W+ P+ Y+
Sbjct: 220 GETIYLPAATLRPETVYGVTNMWLNPEATYV 250
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 42/235 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
KDLI NHLTFFI+ H AI+ + + WP+GI NG L KMSKS+GN L +A+++
Sbjct: 610 AKDLIPNHLTFFIFNHVAIF--DKKHWPKGIAVNGFGTLEGQKMSKSKGNVLNFIDAIEE 667
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
AD +RL + + LA+ D++F
Sbjct: 668 NGADVVRLYI------------------------------MGLAEH-----DSDFDWRRK 692
Query: 1329 DAGILR--LYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFK 1386
+ G LR + F E V E ++ + G + D+ L +N I+ + +
Sbjct: 693 EVGKLRKQVERFYELVSEFATYEA--KEGVELKDIDRWMLHRLNKAIEGATKALEEFRTR 750
Query: 1387 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHV 1440
A++ F+ + Y T + VLR +V L+ P PH++E +
Sbjct: 751 TAVQWAFYTVLNDLRWYLRRTEGRDDDAKRYVLRTLADVWVRLMAPFTPHISEEL 805
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 106/257 (41%), Gaps = 49/257 (19%)
Query: 557 WDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKVSTKLPWDEQWLIESLSD 616
W F ++ FPP + E+Q+W D+ K + ++ WD + L D
Sbjct: 146 WTREFHTTSLFPPFSKFI---------EWQFWTLKDMGLVVKGAHRVRWDPV-VGTPLGD 195
Query: 617 STIY-------MAYYTVAHLLQGGTFRGENGNALNINCVIVFQVLPYDPVPIIQVPEYGN 669
I + Y + +L+ ENG + + + Y + PE
Sbjct: 196 HDIMEGEDVQILEYVIIKFILE------ENGETIYLPAATLRPETVYGVTNMWLNPE--- 246
Query: 670 LCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYD-GIMLVGEFKGKKVQEVKKLLQKKI 728
Y K K++ + ++ +KE Y F D I ++ EFKG+K
Sbjct: 247 ----ATYVKAKVRKGDREELWIVSKEAAYKLSFQDREIEVIEEFKGEK------------ 290
Query: 729 DIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREK 788
+IG +K PVT VI LP + D TG+V SVP+ +P D+ AL DLKK+ K
Sbjct: 291 -LIGKYVKNPVTGDEVI-ILPAEFVDPDNATGVVMSVPAHAPFDHIALEDLKKETEILLK 348
Query: 789 Y----HVTDEMCVVALC 801
Y V +E+ ++L
Sbjct: 349 YDIDPRVVEEISYISLI 365
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
Query: 595 CSGKVS--TKLPWDEQWLIESLSDSTIYMAYYTVA-HLLQ 631
C+ KV T LPWD W+IESLSDSTIYMAYYT++ H+ Q
Sbjct: 508 CARKVGLGTPLPWDPDWVIESLSDSTIYMAYYTISRHINQ 547
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 1488 RTLVLRFVEVQALLLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGP 1533
R ++ +V L+ P PH++E +++ LG +G + A WPE P
Sbjct: 780 RYVLRTLADVWVRLMAPFTPHISEELWEKLGGEGFVSLAPWPEPVP 825
>sp|O58698|SYL_PYRHO Leucine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=leuS PE=1
SV=1
Length = 967
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 249/560 (44%), Gaps = 120/560 (21%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+ +I++ YG+ AV KL I+SQ DK+KL++A + +Y ++ GI V ++GK VQ
Sbjct: 362 ISLIKLEGYGDFPAVEEVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFKVPPYEGKPVQ 421
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
EVK+ + K++ G+A ++Y ++ G V +
Sbjct: 422 EVKEAIAKEMLEKGIA--------EIMYEFAEKNVISRFGNRAVIKI------------- 460
Query: 779 LKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGAS 838
+ DQW++DYG P WK A + L M + R F A
Sbjct: 461 ---------------------IHDQWFIDYGNPEWKEKARKALERMKILPETRRAQFEAI 499
Query: 839 LNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALN 898
++WL + AC+R GLGT LPWD +W+IESLSDSTIYMAYYT++ + G
Sbjct: 500 IDWLDKKACARKIGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINKLRQEG------K 553
Query: 899 IKAEDLTPEVWDYVFFK------AAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+ E LTPE +DY+F + K +P + M+ EF+YWYP+D RCSGKDL
Sbjct: 554 LDPEKLTPEFFDYIFLEEFSEDKEKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDL 613
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
I NHLTFFI+ H AI+ + E WP+GI NG L K
Sbjct: 614 IPNHLTFFIFNHVAIFRE--EHWPKGIAVNGFGTLEGQK--------------------- 650
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
++ G++L NF+ +A+++ AD +R
Sbjct: 651 ----------------------MSKSKGNVL-----------NFI---DAIEENGADVVR 674
Query: 1073 LCLADSGDSVEDANFVESMADAGILR--LYTFIEWVKEILATQSTLRTGSQDSFNDKVFL 1130
L + + D++F + G LR + F E + + + +D D+ L
Sbjct: 675 LYIMSLAEH--DSDFDWRRKEVGKLRKQIERFYELISQFAEYEVKGNVELKDI--DRWML 730
Query: 1131 SEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQ 1189
+N IKET + + + A++ F+ + Y T + VLR +V
Sbjct: 731 HRLNKAIKETTNALEEFRTRTAVQWAFYSIMNDLRWYLRRTEGRDDEAKRYVLRTLADVW 790
Query: 1190 ALLLCPVCPHVAEHVYQLLG 1209
L+ P PH+ E +++ LG
Sbjct: 791 VRLMAPFTPHICEELWEKLG 810
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 406 CTERSARNMAYQGFTEVEGKINVLLRLTGQVCIRSGDECVVALC-DQWYLDYGEPTWKAA 464
E A+ M +G E+ + V R G+ V+ + DQW++DYG P WK
Sbjct: 423 VKEAIAKEMLEKGIAEIMYEF-----AEKNVISRFGNRAVIKIIHDQWFIDYGNPEWKEK 477
Query: 465 AEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMA 524
A + L M + R F A ++WL + AC+R GLGT LPWD +W+IESLSDSTIYMA
Sbjct: 478 ARKALERMKILPETRRAQFEAIIDWLDKKACARKIGLGTPLPWDPEWVIESLSDSTIYMA 537
Query: 525 YYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKS------APFPPKCRVPKAKL 578
YYT++ + G + E LTPE +DY+F + K +P +
Sbjct: 538 YYTISRHINKLRQEG------KLDPEKLTPEFFDYIFLEEFSEDKEKELEKKTGIPAEII 591
Query: 579 DIMRREFQYWYPVDLRCSGK 598
M+ EF+YWYP+D RCSGK
Sbjct: 592 HEMKEEFEYWYPLDWRCSGK 611
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 126/286 (44%), Gaps = 56/286 (19%)
Query: 72 KIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFP 131
KI+E + D + + KF+ T FPY++G LH+GH + + + RF R++G VLFP
Sbjct: 21 KIFEPNIRDKPK---EKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFP 77
Query: 132 FGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAV 191
+H TG PI A+++K + DP
Sbjct: 78 MAWHITGSPIVGIAERIK------------------------NRDP-------------- 99
Query: 192 AKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITT 251
K W + ++ + F D + + +F A + G VDW R F TT
Sbjct: 100 ------KTIWIYRDVYKVPEEILWTFEDPINIVKYFMKAAKETFIRAGFSVDWSREFYTT 153
Query: 252 DSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIK 311
P F F+ WQF +L+++ I G + P P DHD GE V +Y +IK
Sbjct: 154 SLFPPFSKFIEWQFWKLKEKGYIVKGAHRVRWDPVVGTPLGDHDLMEGEDVPILDYIIIK 213
Query: 312 MRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYI 357
L + + + ++L AATLRPET+YG TN WV P+ Y+
Sbjct: 214 FELRE---------NGEVIYLPAATLRPETVYGVTNMWVNPNATYV 250
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 42/235 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLTFFI+ H AI+ +E WP+GI NG L KMSKS+GN L +A+++
Sbjct: 610 GKDLIPNHLTFFIFNHVAIFREE--HWPKGIAVNGFGTLEGQKMSKSKGNVLNFIDAIEE 667
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
AD +RL ++ S+A+ D++F
Sbjct: 668 NGADVVRL-------------YIMSLAE----------------------HDSDFDWRRK 692
Query: 1329 DAGILR--LYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFK 1386
+ G LR + F E + + + +D D+ L +N IKET + + +
Sbjct: 693 EVGKLRKQIERFYELISQFAEYEVKGNVELKDI--DRWMLHRLNKAIKETTNALEEFRTR 750
Query: 1387 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHV 1440
A++ F+ + Y T + VLR +V L+ P PH+ E +
Sbjct: 751 TAVQWAFYSIMNDLRWYLRRTEGRDDEAKRYVLRTLADVWVRLMAPFTPHICEEL 805
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 676 YEKLKIQSQNDKDKLQEAKELVYLKGFYD-GIMLVGEFKGKKVQEVKKLLQKKIDIIGVA 734
Y K K++ ++ ++ +KE Y F D I ++ EFKG+K +IG
Sbjct: 249 YVKAKVRRKDKEETWIVSKEAAYKLSFQDREIEVIEEFKGEK-------------LIGKY 295
Query: 735 LKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREKYHV 791
++ PV+ VI LP + D TG+V SVP+ +P D+ AL DLK++ EKY +
Sbjct: 296 VRNPVSGDEVI-ILPAEFVDPDNATGVVMSVPAHAPFDHVALEDLKRETEILEKYDI 351
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
Query: 595 CSGKVS--TKLPWDEQWLIESLSDSTIYMAYYTVAH 628
C+ K+ T LPWD +W+IESLSDSTIYMAYYT++
Sbjct: 508 CARKIGLGTPLPWDPEWVIESLSDSTIYMAYYTISR 543
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 1442 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQAL 1500
+N IKET + + + A++ F+ + Y T + VLR +V
Sbjct: 733 LNKAIKETTNALEEFRTRTAVQWAFYSIMNDLRWYLRRTEGRDDEAKRYVLRTLADVWVR 792
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPIDD 1536
L+ P PH+ E +++ LG +G + A+WPE P+++
Sbjct: 793 LMAPFTPHICEELWEKLGGEGFVSLAKWPE--PVEE 826
>sp|Q9V0B9|SYL_PYRAB Leucine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=leuS PE=3 SV=1
Length = 967
Score = 218 bits (554), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 250/560 (44%), Gaps = 120/560 (21%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+ +I++ YG AV +KL I+SQ D++KL++A + +Y ++ GI V + GK VQ
Sbjct: 362 ISLIKLEGYGEFPAVEEVQKLGIKSQKDREKLEQATKTIYKAEYHKGIFKVPPYDGKPVQ 421
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
EVK+L+ K++ G+A ++Y ++ G V +
Sbjct: 422 EVKELIAKEMMEKGIA--------EIMYEFAEKNVISRFGNRAVIKI------------- 460
Query: 779 LKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGAS 838
+ DQW++DYG WK A + LA M Y + R F A
Sbjct: 461 ---------------------IHDQWFIDYGNSEWKEKARKALARMKIYPETRRAQFEAI 499
Query: 839 LNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALN 898
++WL + AC+R GLGT LPWD +W+IESLSDSTIYMAYYT++ + R E
Sbjct: 500 IDWLDKKACARKVGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHI--NRLREEG----R 553
Query: 899 IKAEDLTPEVWDYVFFKAAPFPPKCR------VPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+ E LTPE +DY+F + + +P + M+ EF+YWYP+D RCSGKDL
Sbjct: 554 LDPEKLTPEFFDYIFLEEFSEEREKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDL 613
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
I NHLTFFI+ H AI+ + E WP+GI NG L K
Sbjct: 614 IPNHLTFFIFNHVAIFRE--EHWPKGIAVNGFGTLEGQK--------------------- 650
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
++ G++L NF+ +A+++ AD +R
Sbjct: 651 ----------------------MSKSKGNVL-----------NFI---DAIEENGADVVR 674
Query: 1073 LCLADSGDSVEDANFVESMADAGILR--LYTFIEWVKEILATQSTLRTGSQDSFNDKVFL 1130
L + + D++F + G LR L F E + + ++ + + DK L
Sbjct: 675 LYIMSLAEH--DSDFDWRRKEVGKLRRQLERFYELISQFAEYEA--KENVELKTIDKWLL 730
Query: 1131 SEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQ 1189
+N I+ T + + A++ F+ + Y T + VLR ++
Sbjct: 731 HRLNKAIEGTTKALEEFRTRTAVQWAFYSIMNDLRWYMRRTEGRDDEAKRFVLRKLADIW 790
Query: 1190 ALLLCPVCPHVAEHVYQLLG 1209
L+ P PH+ E +++ LG
Sbjct: 791 VRLMAPFTPHICEELWEKLG 810
Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 108/200 (54%), Gaps = 18/200 (9%)
Query: 406 CTERSARNMAYQGFTEVEGKINVLLRLTGQVCIRSGDECVVALC-DQWYLDYGEPTWKAA 464
E A+ M +G E+ + V R G+ V+ + DQW++DYG WK
Sbjct: 423 VKELIAKEMMEKGIAEIMYEFA-----EKNVISRFGNRAVIKIIHDQWFIDYGNSEWKEK 477
Query: 465 AEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMA 524
A + LA M Y + R F A ++WL + AC+R GLGT LPWD +W+IESLSDSTIYMA
Sbjct: 478 ARKALARMKIYPETRRAQFEAIIDWLDKKACARKVGLGTPLPWDPEWVIESLSDSTIYMA 537
Query: 525 YYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKSAPFPPKCR------VPKAKL 578
YYT++ + R E + E LTPE +DY+F + + +P +
Sbjct: 538 YYTISRHI--NRLREEG----RLDPEKLTPEFFDYIFLEEFSEEREKELEKKTGIPAEII 591
Query: 579 DIMRREFQYWYPVDLRCSGK 598
M+ EF+YWYP+D RCSGK
Sbjct: 592 HEMKEEFEYWYPLDWRCSGK 611
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 56/286 (19%)
Query: 72 KIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFP 131
K++E + D + + KF+ T FPY++G LH+GH + + + RF R++G VLFP
Sbjct: 21 KVFEPNIKDKPK---EKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFP 77
Query: 132 FGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAV 191
G+H TG PI A+++K + +P T
Sbjct: 78 MGWHITGSPIVGIAERIK---------------NRDPHT--------------------- 101
Query: 192 AKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITT 251
W + ++ + F D + + +F A + G VDW R F TT
Sbjct: 102 --------IWIYRDVYKVPEEILWTFEDPVNIVKYFMKAAKETFIRAGFSVDWSREFYTT 153
Query: 252 DSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIK 311
P F F+ WQF++L+++ I G + P P DHD GE V EY +IK
Sbjct: 154 SLFPPFSKFIEWQFLKLKEKGYIVKGAHRVRWDPVVGTPLGDHDLMEGEDVPILEYVIIK 213
Query: 312 MRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYI 357
L + + ++L AATLRPET+YG TN W+ P+ Y+
Sbjct: 214 FELKE---------GDETIYLPAATLRPETVYGVTNMWINPNATYV 250
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 42/235 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLTFFI+ H AI+ +E WP+GI NG L KMSKS+GN L +A+++
Sbjct: 610 GKDLIPNHLTFFIFNHVAIFREE--HWPKGIAVNGFGTLEGQKMSKSKGNVLNFIDAIEE 667
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
AD +RL ++ S+A+ D++F
Sbjct: 668 NGADVVRL-------------YIMSLAE----------------------HDSDFDWRRK 692
Query: 1329 DAGILR--LYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFK 1386
+ G LR L F E + + ++ + + DK L +N I+ T + +
Sbjct: 693 EVGKLRRQLERFYELISQFAEYEA--KENVELKTIDKWLLHRLNKAIEGTTKALEEFRTR 750
Query: 1387 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHV 1440
A++ F+ + Y T + VLR ++ L+ P PH+ E +
Sbjct: 751 TAVQWAFYSIMNDLRWYMRRTEGRDDEAKRFVLRKLADIWVRLMAPFTPHICEEL 805
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
Query: 595 CSGKVS--TKLPWDEQWLIESLSDSTIYMAYYTVAH 628
C+ KV T LPWD +W+IESLSDSTIYMAYYT++
Sbjct: 508 CARKVGLGTPLPWDPEWVIESLSDSTIYMAYYTISR 543
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 19/131 (14%)
Query: 676 YEKLKIQSQNDKDKLQEAKELVYLKGFYD-GIMLVGEFKGKKVQEVKKLLQKKIDIIGVA 734
Y K K++ ++ +KE Y F D I ++ EFKG+K +IG
Sbjct: 249 YVKAKVKRGGKEETWIISKEAAYKLSFQDREIEVIEEFKGEK-------------LIGKY 295
Query: 735 LKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREKY----H 790
++ PVT VI LP + D TG+V SVP+ +P D+ AL DLK++ KY
Sbjct: 296 VRNPVTGDEVI-ILPAEFVDPDNATGVVMSVPAHAPFDHVALEDLKRESEILVKYDIDPR 354
Query: 791 VTDEMCVVALC 801
+ +E+ ++L
Sbjct: 355 IVEEITYISLI 365
Score = 41.6 bits (96), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 20/178 (11%)
Query: 1442 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQAL 1500
+N I+ T + + A++ F+ + Y T + VLR ++
Sbjct: 733 LNKAIEGTTKALEEFRTRTAVQWAFYSIMNDLRWYMRRTEGRDDEAKRFVLRKLADIWVR 792
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPIDDILVRSSSYLMEAAHAFRLQVKNHI 1560
L+ P PH+ E +++ LG +G + A+WPE P+D+ + + +K I
Sbjct: 793 LMAPFTPHICEELWEKLGGEGFVSLAKWPE--PVDEWWNEEVEVEEDFIKSLIEDIKEII 850
Query: 1561 LTASKKKGKKVGGGGVGLVEKPTHATVWVAKTFPPWQSIVLTTMKQMMEVREPTATLC 1618
A +E P A ++ A P W+ V + + E + A L
Sbjct: 851 EVAK--------------IESPKRAYIYTA---PEWKWKVYEVVAEKREFKSAMAELM 891
>sp|A1RTX9|SYL_PYRIL Leucine--tRNA ligase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM
9189) GN=leuS PE=3 SV=1
Length = 945
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 163/556 (29%), Positives = 249/556 (44%), Gaps = 104/556 (18%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIML--VGEFKGKK 716
+P+I+V YG+ A V E++ I+SQ D L+EA + VY + G+M V E G
Sbjct: 335 IPLIKVEGYGDYPAKEVVERMGIKSQTDP-ALEEATKEVYSTEYTRGVMREDVTERIGIH 393
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
+QE + + + + + A + P+ RE +V + +
Sbjct: 394 LQEPARSMLRAVFKMYFAGR------------PVREAREFIAKWLVEARLG------GVM 435
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFG 836
D+ KP + E+ V L DQW+++YG+P WK A + + M E + +F
Sbjct: 436 YDIMNKPVY---CRCGTEIVVKVLEDQWFINYGDPKWKETARKLVDEMVIIPGEAKAHFF 492
Query: 837 ASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNA 896
A+++WL + AC+RT GLGT LPW W+IESLSDSTIYMA+YTV ++
Sbjct: 493 ATIDWLDKRACARTRGLGTPLPWSSGWIIESLSDSTIYMAFYTVIKKIR----------Q 542
Query: 897 LNIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLI 953
I+ E LT E WD+VF A K VP L +R EF+YWYP+D R
Sbjct: 543 FGIRPEQLTEEFWDFVFLGQGSADEVSKKTGVPVEALKAIREEFEYWYPLDSR------- 595
Query: 954 QNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNH 1013
NS KDLI NHLT
Sbjct: 596 ----------------------------------NSGKDLIPNHLT-------------- 607
Query: 1014 LTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRL 1073
FFI+ H AI+ E WPR I ANG +L KMSKS+ N L L AV+ + D +R
Sbjct: 608 --FFIFNHVAIFPRE--KWPRQIVANGWVLREGEKMSKSKRNVLPLDRAVEMYGPDPLRA 663
Query: 1074 CLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEM 1133
LA + + +D +F ++ A +L V+ ++ G + D+ ++E+
Sbjct: 664 TLALAAEVEQDLDFRDAEARRNAQQLMAIYTLVQRLIQNAENRPAG----WIDQWLIAEI 719
Query: 1134 NLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLL 1193
+ + + + Y K+ ++A + +A D+Y + L L + +
Sbjct: 720 SRILDKAREAYEKVRVRQAAVEVIYNAKAVFDQYLAMVEKPT----KLALEAARAWVVAM 775
Query: 1194 CPVCPHVAEHVYQLLG 1209
P+ PH+AE ++ LLG
Sbjct: 776 EPIVPHIAEELWALLG 791
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 96/167 (57%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVV-ALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G E VV L DQW+++YG+P WK A + + M E + +F A+++WL + A
Sbjct: 443 VYCRCGTEIVVKVLEDQWFINYGDPKWKETARKLVDEMVIIPGEAKAHFFATIDWLDKRA 502
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+RT GLGT LPW W+IESLSDSTIYMA+YTV ++ I+ E LT
Sbjct: 503 CARTRGLGTPLPWSSGWIIESLSDSTIYMAFYTVIKKIR----------QFGIRPEQLTE 552
Query: 555 EVWDYVFFKSAP---FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E WD+VF K VP L +R EF+YWYP+D R SGK
Sbjct: 553 EFWDFVFLGQGSADEVSKKTGVPVEALKAIREEFEYWYPLDSRNSGK 599
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 119/281 (42%), Gaps = 59/281 (20%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
K+F T +PY NG +H+GH + + RF R G+ VL+P GFH TG PI A+
Sbjct: 35 KYFITAAYPYPNGAVHIGHGRTYLIADVLARFYRHMGRVVLYPMGFHYTGTPILTIAE-- 92
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
V AG + M+ G
Sbjct: 93 ------------------------------------------VIAAGDKTVIEEYMEIYG 110
Query: 209 LEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRL 268
+ ++EI+K D + +F + + G+ +DW R F T D P + F++WQF +L
Sbjct: 111 VPEEEIKKMGDPLYLARYFHNRSKMAMERFGLSIDWTREFTTID--PEYQRFIQWQFEKL 168
Query: 269 RDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDSK 328
R + I G+ + PR + P HD + ++TLI DS+
Sbjct: 169 RKKGLIVRGRHPVGWCPRHSMPVGAHDTKDDKEPEIGQWTLIYF------------TDSE 216
Query: 329 PVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFL 369
+ AATLRPET+ G TN W+ PD Y+ ++ D K V +
Sbjct: 217 GLTFPAATLRPETVPGVTNLWINPDAEYV-VAEFDGKRVVI 256
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 43/232 (18%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLTFFI+ H AI+ E WPR I ANG +L KMSKS+ N L L AV+
Sbjct: 598 GKDLIPNHLTFFIFNHVAIFPRE--KWPRQIVANGWVLREGEKMSKSKRNVLPLDRAVEM 655
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ D +R LA + + +D +F ++ A ++ A
Sbjct: 656 YGPDPLRATLALAAEVEQDLDFRDAEARRNAQQLMA------------------------ 691
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
+YT V+ ++ G + D+ ++E++ + + + Y K+ ++A
Sbjct: 692 ------IYTL---VQRLIQNAENRPAG----WIDQWLIAEISRILDKAREAYEKVRVRQA 738
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ +A D+Y + L L + + P+ PH+AE +
Sbjct: 739 AVEVIYNAKAVFDQYLAMVEKPT----KLALEAARAWVVAMEPIVPHIAEEL 786
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
+ T LPW W+IESLSDSTIYMA+YTV ++ R E
Sbjct: 509 LGTPLPWSSGWIIESLSDSTIYMAFYTVIKKIRQFGIRPEQ 549
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 17/91 (18%)
Query: 704 DGIMLVGEFKGKKV-------------QEVKKLLQKK-IDIIGVALKAPVTSHSV-IYTL 748
D +V EF GK+V EVK L + + + +G +++ PVT V IY
Sbjct: 241 DAEYVVAEFDGKRVVISRDAAYRLSFQAEVKILREARGREFVGRSVQNPVTGEWVPIYEA 300
Query: 749 PMLSIREDKGTGIVTSVPSDSPDDYAALVDL 779
+ R GTG+V SVP+ +P DY AL DL
Sbjct: 301 WFVDPR--VGTGVVMSVPAHAPYDYVALRDL 329
Score = 38.5 bits (88), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 1441 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1500
E++ + + + Y K+ ++A + +A D+Y + L L +
Sbjct: 718 EISRILDKAREAYEKVRVRQAAVEVIYNAKAVFDQYLAMVEKPT----KLALEAARAWVV 773
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWP 1529
+ P+ PH+AE ++ LLG G + A WP
Sbjct: 774 AMEPIVPHIAEELWALLGGSGFVATAPWP 802
>sp|B6YST9|SYL_THEON Leucine--tRNA ligase OS=Thermococcus onnurineus (strain NA1) GN=leuS
PE=3 SV=1
Length = 967
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 249/560 (44%), Gaps = 120/560 (21%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+ +I++ YG AV EKL ++SQ D++KL+EA + +Y ++ G+ + + GK VQ
Sbjct: 362 ISLIKLEGYGEFPAVEEVEKLGVKSQKDEEKLEEATKNIYKAEYHKGVFKIEPYAGKPVQ 421
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
EVK L+ K++ G+A ++Y +
Sbjct: 422 EVKDLIAKELQEKGIA--------EIMY-------------------------------E 442
Query: 779 LKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGAS 838
+KP ++ + + DQW++DYG P WK A + LANM Y + R F A
Sbjct: 443 FAEKPVIS---RFGNQAVIKIIHDQWFIDYGNPEWKEKAREALANMTIYPESRRTQFEAV 499
Query: 839 LNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALN 898
++WL + AC+R GLGT LPWD +W+IESLSDSTIYMAYYT++ + G
Sbjct: 500 IDWLDKKACARKVGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINKLREEG------R 553
Query: 899 IKAEDLTPEVWDYV------FFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+ E L E +DY+ + K +P + M+ EF+YWYP+D RCS KDL
Sbjct: 554 LDPEKLDREFFDYLFREEFSEEREKELAEKTGIPAEIIHEMKEEFEYWYPLDWRCSAKDL 613
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
I NHLTFFI+ H AI+ WPRGI NG L K
Sbjct: 614 IPNHLTFFIFNHVAIF--RKGHWPRGIAVNGFGTLEGQK--------------------- 650
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
++ G++L NF+ +A+++ AD +R
Sbjct: 651 ----------------------MSKSKGNVL-----------NFI---DAIEENGADVVR 674
Query: 1073 LCLADSGDSVEDANFVESMADAGILR--LYTFIEWVKEILATQSTLRTGSQDSFNDKVFL 1130
L + G + D++F + G LR + F E V E + ++ + G + D+ L
Sbjct: 675 LYIM--GLAEHDSDFDWRRKEVGKLRKQVERFYELVSEFASYEA--KEGVELKDIDRWML 730
Query: 1131 SEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQ 1189
+N I+ + + A++ F+ + Y T + VLR +V
Sbjct: 731 HRLNKAIEGATKGLEEFRTRTAVQWAFYSVLNDLRWYLRRTEGRDDEAKRYVLRTLADVW 790
Query: 1190 ALLLCPVCPHVAEHVYQLLG 1209
L+ P PH++E +++ LG
Sbjct: 791 VRLMAPFTPHISEELWEKLG 810
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 97/170 (57%), Gaps = 13/170 (7%)
Query: 436 VCIRSGDECVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G++ V+ + DQW++DYG P WK A + LANM Y + R F A ++WL + A
Sbjct: 448 VISRFGNQAVIKIIHDQWFIDYGNPEWKEKAREALANMTIYPESRRTQFEAVIDWLDKKA 507
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+R GLGT LPWD +W+IESLSDSTIYMAYYT++ + G + E L
Sbjct: 508 CARKVGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINKLREEG------RLDPEKLDR 561
Query: 555 EVWDYV------FFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E +DY+ + K +P + M+ EF+YWYP+D RCS K
Sbjct: 562 EFFDYLFREEFSEEREKELAEKTGIPAEIIHEMKEEFEYWYPLDWRCSAK 611
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 133/293 (45%), Gaps = 55/293 (18%)
Query: 67 SKFREKIYEETVGDAVRSSP--DDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLK 124
K++++ E+ V + R++ + KF+ T FPY++G LH+GH + + + RF R++
Sbjct: 11 EKWQKRWMEDRVFEPDRNAKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQ 70
Query: 125 GKRVLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSK 184
G VLFP +H TG PI A+++K + +P+T + +D K
Sbjct: 71 GYNVLFPMAWHITGAPIVGIAERIK---------------NRDPKTIH-----IYRDVYK 110
Query: 185 GKKSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDW 244
+ ++ + KF D + +F A + G VDW
Sbjct: 111 ------------------------VPEEILWKFEDPKEIVKYFMKAARETFIRAGFSVDW 146
Query: 245 RRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGP 304
R F TT P F F+ WQF L+D + G + P P DHD GE V
Sbjct: 147 SREFHTTSLFPPFSKFIEWQFWTLKDMGLVVKGAHRVRWDPVVGTPLGDHDIMEGEDVQI 206
Query: 305 QEYTLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYI 357
EY +IK L + + + +++ AATLRPET+YG TN W+ P+ Y+
Sbjct: 207 LEYVIIKFILEE---------NGEEIYMPAATLRPETVYGVTNMWLNPEAIYV 250
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 42/235 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
KDLI NHLTFFI+ H AI+ WPRGI NG L KMSKS+GN L +A+++
Sbjct: 610 AKDLIPNHLTFFIFNHVAIF--RKGHWPRGIAVNGFGTLEGQKMSKSKGNVLNFIDAIEE 667
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
AD +RL + + LA+ D++F
Sbjct: 668 NGADVVRLYI------------------------------MGLAEH-----DSDFDWRRK 692
Query: 1329 DAGILR--LYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFK 1386
+ G LR + F E V E + ++ + G + D+ L +N I+ + +
Sbjct: 693 EVGKLRKQVERFYELVSEFASYEA--KEGVELKDIDRWMLHRLNKAIEGATKGLEEFRTR 750
Query: 1387 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHV 1440
A++ F+ + Y T + VLR +V L+ P PH++E +
Sbjct: 751 TAVQWAFYSVLNDLRWYLRRTEGRDDEAKRYVLRTLADVWVRLMAPFTPHISEEL 805
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 49/257 (19%)
Query: 557 WDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKVSTKLPWDEQWLIESLSD 616
W F ++ FPP + E+Q+W D+ K + ++ WD + L D
Sbjct: 146 WSREFHTTSLFPPFSKFI---------EWQFWTLKDMGLVVKGAHRVRWDPV-VGTPLGD 195
Query: 617 STIY-------MAYYTVAHLLQGGTFRGENGNALNINCVIVFQVLPYDPVPIIQVPEYGN 669
I + Y + +L+ ENG + + + Y + PE
Sbjct: 196 HDIMEGEDVQILEYVIIKFILE------ENGEEIYMPAATLRPETVYGVTNMWLNPE--- 246
Query: 670 LCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYD-GIMLVGEFKGKKVQEVKKLLQKKI 728
+Y K K++ + ++ +KE Y F D I ++ EFKG++
Sbjct: 247 ----AIYVKAKVRRGDREETWIISKEAAYKLSFQDREIEVIEEFKGER------------ 290
Query: 729 DIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREK 788
+IG +K PVT VI LP + D TG+V SVP+ +P D+ AL DLKK+ K
Sbjct: 291 -LIGKYVKNPVTGDEVI-ILPAEFVDPDNATGVVMSVPAHAPFDHVALEDLKKETEILLK 348
Query: 789 Y----HVTDEMCVVALC 801
Y V +E+ ++L
Sbjct: 349 YDIDPRVVEEISYISLI 365
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
Query: 595 CSGKVS--TKLPWDEQWLIESLSDSTIYMAYYTVA 627
C+ KV T LPWD +W+IESLSDSTIYMAYYT++
Sbjct: 508 CARKVGLGTPLPWDPEWVIESLSDSTIYMAYYTIS 542
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 1461 ALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHVYQLLGK 1519
A++ F+ + Y T + VLR +V L+ P PH++E +++ LG
Sbjct: 752 AVQWAFYSVLNDLRWYLRRTEGRDDEAKRYVLRTLADVWVRLMAPFTPHISEELWEKLGG 811
Query: 1520 KGSIVKARWPEGGP 1533
+G + A+WPE P
Sbjct: 812 EGFVSLAKWPEPNP 825
>sp|A8A8T2|SYL_IGNH4 Leucine--tRNA ligase OS=Ignicoccus hospitalis (strain KIN4/I / DSM
18386 / JCM 14125) GN=leuS PE=3 SV=1
Length = 1022
Score = 210 bits (535), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 174/564 (30%), Positives = 248/564 (43%), Gaps = 116/564 (20%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
V +I+VPE G L V EKL I+ +DK KL+EA VY K + G ML + K
Sbjct: 400 VQVIRVPEEGLLVPQLV-EKLGIRDTSDKKKLEEATREVYSKEYRKGRMLESVLERVKGD 458
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
E + ALKA + + P+ RE + D +
Sbjct: 459 ER----------LRAALKAFLGND------PVPDAREKTAKWLKLFGAGD------VFYE 496
Query: 779 LKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGAS 838
+K P + +E+ V L DQW+L+YG+P WK A + LA M + + F +
Sbjct: 497 IKNAPVYS---RFGNEVVVKVLKDQWFLNYGDPQWKELARKALARMRIIPENFLKEFEDT 553
Query: 839 LNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALN 898
++WL + AC+RT GLGT LPWD++W+IESLSDSTIYMA+YTV ++L+G +
Sbjct: 554 IDWLQKRACARTRGLGTPLPWDKRWIIESLSDSTIYMAFYTVVNILRGAS---------- 603
Query: 899 IKAEDLTPEVWDYVFF-KAAP--FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQN 955
++ E L PEVWDY+ K P K + A L+ RR F YWYPVD R SGKDLI+N
Sbjct: 604 VEPEKLQPEVWDYIMLGKGNPKELEEKYGISAAVLEEARRSFDYWYPVDSRHSGKDLIRN 663
Query: 956 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHLT 1015
HLTFFI+ H AI+ + + WPR I NG + L K + L
Sbjct: 664 HLTFFIFNHAAIFPE--DKWPRQIVVNGFVNLEGKK------------------MSKSLG 703
Query: 1016 FFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLCL 1075
I I AI + F+ D +RL L
Sbjct: 704 NIIPITVAI---------------------------------------RSFAPDIIRLVL 724
Query: 1076 ADSGDSVEDANFVESMADAGILRLY---TFIEWVKEILATQSTLRTGSQDSFNDKVFLSE 1132
S + DA+F M I L + +E VK+ + + + D +LS
Sbjct: 725 LHSAELGSDADFRTEMVSRAISNLREIKSIVEKVKDYNGPRP-----ANLTMLDAWYLSS 779
Query: 1133 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTL------VLRF- 1185
++ + + +E +F L ++ +E A M R L VLR+
Sbjct: 780 FVKDVENVTNMMEDLKIREVTNVLYFILL---NRTKEYLNALEAMGRGLDEVAKWVLRYT 836
Query: 1186 VEVQALLLCPVCPHVAEHVYQLLG 1209
VE ++ P P AE ++ LG
Sbjct: 837 VERWVKMMTPFTPFFAEEMWHELG 860
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 104/167 (62%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVV-ALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G+E VV L DQW+L+YG+P WK A + LA M + + F +++WL + A
Sbjct: 502 VYSRFGNEVVVKVLKDQWFLNYGDPQWKELARKALARMRIIPENFLKEFEDTIDWLQKRA 561
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+RT GLGT LPWD++W+IESLSDSTIYMA+YTV ++L+G + ++ E L P
Sbjct: 562 CARTRGLGTPLPWDKRWIIESLSDSTIYMAFYTVVNILRGAS----------VEPEKLQP 611
Query: 555 EVWDYVFF-KSAP--FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
EVWDY+ K P K + A L+ RR F YWYPVD R SGK
Sbjct: 612 EVWDYIMLGKGNPKELEEKYGISAAVLEEARRSFDYWYPVDSRHSGK 658
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 143/295 (48%), Gaps = 18/295 (6%)
Query: 67 SKFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGK 126
+K+RE+ + +A KF+ T FPY N +HLGH+ + S + RF R++G
Sbjct: 17 AKWREEWERARLHEADVDPNRPKFYVTAAFPYPNSPMHLGHSRTYSVTDAYARFKRMRGF 76
Query: 127 RVLFPFGFHCTGMPIKACADKLKREME---SFGFPPQFPSEDTEPQTDKD-DDDPVIKDK 182
VLFP GFH TG PI A ++K+K+ ++ S G E + + +++ IK+
Sbjct: 77 NVLFPMGFHYTGTPIIAMSEKVKQGLQALRSLGEVKTILEEIWKIKVERNLSIGEAIKEY 136
Query: 183 SKGK-KSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIH 241
+G + + K S +Y + + +++ K + ++F + + ++ +G
Sbjct: 137 LRGAGREDLMDKTDSIEYLVLFYKVFEIPVEDLEKLTEPLSMANYFASITEEGMKELGYM 196
Query: 242 VDWRRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEG 301
+DWRR F T D P F F+ WQF++L D ++ G + P + P HD
Sbjct: 197 IDWRRKFTTVD--PDFQKFITWQFLKLYDLGYVEKGTHPVAWDPVYDTPVSQHDTKGDVE 254
Query: 302 VGPQEYTLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAY 356
+EY +I L L + ++L AATLR ET++G TN W+ P+ Y
Sbjct: 255 PEIEEYDVI-----------LFKLKDEDLYLPAATLRAETVFGVTNVWLNPEAEY 298
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI+NHLTFFI+ H AI+ ++ WPR I NG + L KMSKS GN + +T A++
Sbjct: 657 GKDLIRNHLTFFIFNHAAIFPED--KWPRQIVVNGFVNLEGKKMSKSLGNIIPITVAIRS 714
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAV 1299
F+ D +RL L S + DA+F M A+
Sbjct: 715 FAPDIIRLVLLHSAELGSDADFRTEMVSRAI 745
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 594 RCSGKVSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
R G + T LPWD++W+IESLSDSTIYMA+YTV ++L+G + E
Sbjct: 564 RTRG-LGTPLPWDKRWIIESLSDSTIYMAFYTVVNILRGASVEPEK 608
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 721 KKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLK 780
KKLL+K + + PV LP + + TG+V SVP+ +P DY AL +L+
Sbjct: 334 KKLLKKMVINPATEEEVPV--------LPARFVDPNVATGVVMSVPAHAPFDYVALKELE 385
Query: 781 KKPPFREKYHVTDEMCVVALCDQWYL 806
P + + + + V+ + ++ L
Sbjct: 386 GDPEYSDIVKSIELVQVIRVPEEGLL 411
>sp|Q8ZXT6|SYL_PYRAE Leucine--tRNA ligase OS=Pyrobaculum aerophilum (strain ATCC 51768 /
IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=leuS PE=3
SV=1
Length = 945
Score = 210 bits (535), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 250/564 (44%), Gaps = 116/564 (20%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIM---LVGEFKGK 715
+P+I+V YG+ A V E++ I+SQ D L+EA VY + G+M +VG
Sbjct: 335 IPLIRVEGYGDYPAKEVVERMGIKSQTDP-ALEEATREVYSAEYTKGVMREDVVGRVGAH 393
Query: 716 KVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAA 775
+ + +L+ + P+ RE +V +
Sbjct: 394 LSEPARSMLRAVFKMY-------------FAGRPVREAREFISKWLVEAGIG------GV 434
Query: 776 LVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNF 835
+ D+ KP + E+ V L DQW+++YGE WK A + + M E + +F
Sbjct: 435 MYDIMNKPVY---CRCGTEIVVKVLEDQWFINYGEGRWKELARKLVEEMAIVPPEAKAHF 491
Query: 836 GASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGN 895
A+++WL + AC+RT GLGT LPW + W+IESLSDSTIYMA+YTV ++
Sbjct: 492 LATIDWLDKRACARTRGLGTPLPWSDGWVIESLSDSTIYMAFYTVIKRIR---------- 541
Query: 896 ALNIKAEDLTPEVWDYVFFKAAP---FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
IK E L E WDYVF + VP +L +R EF +WYP+D R
Sbjct: 542 QFGIKPEQLIKEFWDYVFLGVGTPEEVAKRTGVPPEQLKAIREEFDFWYPLDSR------ 595
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
NS KDLI NHLT
Sbjct: 596 -----------------------------------NSGKDLIPNHLT------------- 607
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
FFI+ H AI+ E WPR I ANG +L KMSKS+ N L L +AV + D +R
Sbjct: 608 ---FFIFNHVAIFPRE--KWPRQIVANGWVLREGEKMSKSKRNVLPLDKAVDMYGPDPLR 662
Query: 1073 LCLADSGDSVEDANF--VESMADA-GILRLYTFIEWVKEILATQSTLRTGSQDSFN--DK 1127
LA + + +D +F E++ +A ++ +Y+ Q +T S N DK
Sbjct: 663 ATLAITAEVEQDLDFRHAEAIRNAQQLMSIYSL---------AQRLAQTAEDRSPNWLDK 713
Query: 1128 VFLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVE 1187
+SE+ L ++ + Y K+ ++A + ++ D+Y L + E L +
Sbjct: 714 WLVSEIALVLERAREAYEKVRVRQAAVEVLYNAKSVFDQY--LASVE--RPSKLAVEAAR 769
Query: 1188 VQALLLCPVCPHVAEHVYQLLGKD 1211
A+ + P+ PH+AE ++ +LG +
Sbjct: 770 AWAVAMEPIAPHLAEEIWSILGGE 793
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 95/167 (56%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVV-ALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G E VV L DQW+++YGE WK A + + M E + +F A+++WL + A
Sbjct: 443 VYCRCGTEIVVKVLEDQWFINYGEGRWKELARKLVEEMAIVPPEAKAHFLATIDWLDKRA 502
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+RT GLGT LPW + W+IESLSDSTIYMA+YTV ++ IK E L
Sbjct: 503 CARTRGLGTPLPWSDGWVIESLSDSTIYMAFYTVIKRIR----------QFGIKPEQLIK 552
Query: 555 EVWDYVFFKSAP---FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E WDYVF + VP +L +R EF +WYP+D R SGK
Sbjct: 553 EFWDYVFLGVGTPEEVAKRTGVPPEQLKAIREEFDFWYPLDSRNSGK 599
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 118/287 (41%), Gaps = 58/287 (20%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
KFF T +PY NG +H+GH + + RF+R G+ VLFP GFH TG PI A+ +
Sbjct: 35 KFFVTAAYPYPNGAIHIGHGRTYLIADVLARFHRHMGRVVLFPMGFHYTGTPILTIAEAI 94
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
+G A + M G
Sbjct: 95 A--------------------------------------------SGDATVIEEYMAIYG 110
Query: 209 LEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRL 268
+ DEI K + + +F + + ++ G+ +DW R F T D P + F++WQF +L
Sbjct: 111 VPKDEIEKMGNPLYLARYFHEQSKRAMQKFGLGIDWTREFTTID--PEYQRFIQWQFEKL 168
Query: 269 RDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDSK 328
R+R I G+ + PR + P HD + ++TLI D +
Sbjct: 169 RERGLIVRGRHPVGWCPRHSMPVGAHDTKDDKEPEIGQWTLIYF------------ADGE 216
Query: 329 PVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFLVAATLR 375
+ AATLRPET+ G TN W+ PD Y + K V A R
Sbjct: 217 GLVFPAATLRPETVLGVTNMWINPDAEYAVIEHNGRKMVVSKDAAFR 263
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 47/234 (20%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLTFFI+ H AI+ E WPR I ANG +L KMSKS+ N L L +AV
Sbjct: 598 GKDLIPNHLTFFIFNHVAIFPRE--KWPRQIVANGWVLREGEKMSKSKRNVLPLDKAVDM 655
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ D +R LA + + +D +F + +++ +A
Sbjct: 656 YGPDPLRATLAITAEVEQDLDFRHA----------------------EAIRNAQ------ 687
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFN--DKVFLSEMNLKIKETEDHYTKMLFK 1386
++ +Y+ Q +T S N DK +SE+ L ++ + Y K+ +
Sbjct: 688 --QLMSIYSL---------AQRLAQTAEDRSPNWLDKWLVSEIALVLERAREAYEKVRVR 736
Query: 1387 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+A + ++ D+Y L + E L + A+ + P+ PH+AE +
Sbjct: 737 QAAVEVLYNAKSVFDQY--LASVE--RPSKLAVEAARAWAVAMEPIAPHLAEEI 786
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTV 626
+ T LPW + W+IESLSDSTIYMA+YTV
Sbjct: 509 LGTPLPWSDGWVIESLSDSTIYMAFYTV 536
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 1441 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1500
E+ L ++ + Y K+ ++A + ++ D+Y L + E L + A+
Sbjct: 718 EIALVLERAREAYEKVRVRQAAVEVLYNAKSVFDQY--LASVE--RPSKLAVEAARAWAV 773
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPIDDILVRSSSYL 1545
+ P+ PH+AE ++ +LG +G +VKA WP+ P D + + + Y+
Sbjct: 774 AMEPIAPHLAEEIWSILGGEGLVVKAPWPQLRP-DPVALLAKRYV 817
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 16/97 (16%)
Query: 684 QNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQEVKKLLQKKIDIIGVALKAPVTSHS 743
+++ K+ +K+ + F + ++ E +G+ + +G +++ PVT
Sbjct: 248 EHNGRKMVVSKDAAFRLSFQGDVRILREARGR-------------EFVGRSVQNPVTGEW 294
Query: 744 V-IYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDL 779
V +Y + + GTG+V SVP+ +P DYAAL DL
Sbjct: 295 VPVYEAKFVDPK--VGTGVVMSVPAHAPYDYAALRDL 329
>sp|Q8U2E6|SYL_PYRFU Leucine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM
3638 / JCM 8422 / Vc1) GN=leuS PE=3 SV=1
Length = 967
Score = 210 bits (534), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 160/586 (27%), Positives = 251/586 (42%), Gaps = 129/586 (22%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+ +I++ YG AV +KL ++SQ DKDKL++A + +Y ++ GI + ++GK V
Sbjct: 362 ISLIKLEGYGEFPAVEEVQKLGVKSQKDKDKLEQATKTIYRAEYHKGIFKIPPYEGKPVS 421
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
EVK+L+ K + G+ ++Y ++ G V +
Sbjct: 422 EVKELIAKDLMEKGIG--------EIMYEFAEKNVISRFGNRAVIKI------------- 460
Query: 779 LKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGAS 838
+ DQW++DYG P WK A + L M + R F A
Sbjct: 461 ---------------------IHDQWFIDYGNPEWKEKAREALKRMKILPESRRAQFEAI 499
Query: 839 LNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALN 898
+ WL + AC+R GLGT LPWD W+IESLSDSTIYMAYYT++ + G
Sbjct: 500 IEWLDKKACARKVGLGTPLPWDPDWVIESLSDSTIYMAYYTISRHINKLREEG------K 553
Query: 899 IKAEDLTPEVWDYVFFKAAPFPPKCR------VPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+ E LTPE +DY+F + + + + M+ EF+YWYP+D RCS KDL
Sbjct: 554 LDPEKLTPEFFDYIFLEEFDEKKEKELEEKTGISAEIIHEMKEEFEYWYPLDWRCSAKDL 613
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
I NHLTFFI+ H AI+ + + WP+GI NG L K
Sbjct: 614 IPNHLTFFIFNHVAIFPE--KHWPKGIAVNGFGTLEGQK--------------------- 650
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
++ G++L NF+ +A+++ AD +R
Sbjct: 651 ----------------------MSKSKGNVL-----------NFI---DAIEENGADVVR 674
Query: 1073 LCLADSGDSVEDANFVESMADAGILR--LYTFIEWVKEILATQSTLRTGSQDSFNDKVFL 1130
L + + D++F + G LR + F E + + ++ +D DK L
Sbjct: 675 LYIMSLAEH--DSDFDWRRKEVGRLRKQIERFYELISQFAEYEARENVELKDI--DKWML 730
Query: 1131 SEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQ 1189
+N IK T D + + A++ F+ + Y T + VLR ++
Sbjct: 731 HRLNKAIKGTTDALEEFRTRTAVQWAFYTIMNDLRWYLRRTEGRDDEAKRYVLRTLADIW 790
Query: 1190 ALLLCPVCPHVAEHVYQLLGKDLIQNHLTFFIYIHTAIWGDEPEMW 1235
L+ P PH+ E +++ LG + ++ A W D E W
Sbjct: 791 VRLMAPFTPHICEELWEKLGGEG---------FVSLAKWPDPVEEW 827
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 126/286 (44%), Gaps = 56/286 (19%)
Query: 72 KIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFP 131
KI+E + D + + KF+ T FPY++G LH+GH + + + RF R++G VLFP
Sbjct: 21 KIFEPNIKDKPK---EKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFP 77
Query: 132 FGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAV 191
+H TG PI A+++K + +PQT
Sbjct: 78 MAWHITGSPIVGIAERIK---------------NRDPQT--------------------- 101
Query: 192 AKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITT 251
W + +D + F D + + +F A + G VDW R F TT
Sbjct: 102 --------IWIYRDVYKVPEDILWTFEDPVNIVKYFMKAAKETFIRAGFSVDWSREFYTT 153
Query: 252 DSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIK 311
P F F+ WQF +L+++ I G + P P DHD GE V EY LIK
Sbjct: 154 SLFPPFSKFIEWQFWKLKEKGYIVKGTHRVRWDPVVGTPLGDHDLMDGEDVPILEYILIK 213
Query: 312 MRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYI 357
L + + V+L AATLRPET+YG TN W+ P+ Y+
Sbjct: 214 FELKE---------GEETVYLPAATLRPETVYGVTNMWLNPEATYV 250
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 435 QVCIRSGDECVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEY 493
V R G+ V+ + DQW++DYG P WK A + L M + R F A + WL +
Sbjct: 447 NVISRFGNRAVIKIIHDQWFIDYGNPEWKEKAREALKRMKILPESRRAQFEAIIEWLDKK 506
Query: 494 ACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLT 553
AC+R GLGT LPWD W+IESLSDSTIYMAYYT++ + G + E LT
Sbjct: 507 ACARKVGLGTPLPWDPDWVIESLSDSTIYMAYYTISRHINKLREEG------KLDPEKLT 560
Query: 554 PEVWDYVFFKSAPFPPKCR------VPKAKLDIMRREFQYWYPVDLRCSGK 598
PE +DY+F + + + + M+ EF+YWYP+D RCS K
Sbjct: 561 PEFFDYIFLEEFDEKKEKELEEKTGISAEIIHEMKEEFEYWYPLDWRCSAK 611
Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 42/235 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
KDLI NHLTFFI+ H AI+ ++ WP+GI NG L KMSKS+GN L +A+++
Sbjct: 610 AKDLIPNHLTFFIFNHVAIFPEK--HWPKGIAVNGFGTLEGQKMSKSKGNVLNFIDAIEE 667
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
AD +RL ++ S+A+ D++F
Sbjct: 668 NGADVVRL-------------YIMSLAE----------------------HDSDFDWRRK 692
Query: 1329 DAGILR--LYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFK 1386
+ G LR + F E + + ++ +D DK L +N IK T D + +
Sbjct: 693 EVGRLRKQIERFYELISQFAEYEARENVELKDI--DKWMLHRLNKAIKGTTDALEEFRTR 750
Query: 1387 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHV 1440
A++ F+ + Y T + VLR ++ L+ P PH+ E +
Sbjct: 751 TAVQWAFYTIMNDLRWYLRRTEGRDDEAKRYVLRTLADIWVRLMAPFTPHICEEL 805
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 670 LCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYD-GIMLVGEFKGKKVQEVKKLLQKKI 728
L Y K K++ + + +KE Y F D I +V EFKG+K
Sbjct: 243 LNPEATYVKAKVKKGDKVETWIISKEAAYKLSFQDREIEVVEEFKGEK------------ 290
Query: 729 DIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREK 788
+IG ++ PVT VI LP + D TG+V SVP+ +P D+ AL DLKK+ K
Sbjct: 291 -LIGKFVRNPVTGDEVI-ILPAEFVDPDNATGVVMSVPAHAPFDHVALEDLKKQTDILLK 348
Query: 789 YHV 791
Y +
Sbjct: 349 YDI 351
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Query: 595 CSGKVS--TKLPWDEQWLIESLSDSTIYMAYYTVAH 628
C+ KV T LPWD W+IESLSDSTIYMAYYT++
Sbjct: 508 CARKVGLGTPLPWDPDWVIESLSDSTIYMAYYTISR 543
Score = 40.8 bits (94), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 1442 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQAL 1500
+N IK T D + + A++ F+ + Y T + VLR ++
Sbjct: 733 LNKAIKGTTDALEEFRTRTAVQWAFYTIMNDLRWYLRRTEGRDDEAKRYVLRTLADIWVR 792
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPIDD 1536
L+ P PH+ E +++ LG +G + A+WP+ P+++
Sbjct: 793 LMAPFTPHICEELWEKLGGEGFVSLAKWPD--PVEE 826
>sp|B1YAS9|SYL_PYRNV Leucine--tRNA ligase OS=Pyrobaculum neutrophilum (strain DSM 2338 /
JCM 9278 / V24Sta) GN=leuS PE=3 SV=1
Length = 945
Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 163/559 (29%), Positives = 254/559 (45%), Gaps = 110/559 (19%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIML--VGEFKGKK 716
+P+I+V YG+ A V E++ I+SQ D L++A + VY + G+M V E G
Sbjct: 335 IPLIRVEGYGDYPAKEVVERMGIKSQADP-ALEDATKEVYSAEYARGVMREDVAERVGAH 393
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
++E + + + + + A + + I + E + G+ +
Sbjct: 394 LEEPARSMLRAVFKMYFAGRPVREAREFIARW----LTEARLGGV--------------M 435
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFG 836
D+ KP + E+ V L DQW+++YGE WK AA + + M+ E R F
Sbjct: 436 YDIMNKPVY---CRCGTEIVVKVLEDQWFINYGESRWKEAARELVKEMSIVPGEARAQFL 492
Query: 837 ASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNA 896
A+++WL + AC+RT GLGT LPW W+IESLSDSTIYMA+YTV ++
Sbjct: 493 ATIDWLDKRACARTRGLGTPLPWSSGWVIESLSDSTIYMAFYTVVKRIR----------Q 542
Query: 897 LNIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLI 953
I+ E LT E WD+VF A K VP L +R EF+YWYP+D R
Sbjct: 543 FGIRPEQLTEEFWDFVFLGQGSADEVSKKTGVPVEALKAIREEFEYWYPLDSR------- 595
Query: 954 QNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNH 1013
NS KDLI NHL
Sbjct: 596 ----------------------------------NSGKDLIPNHL--------------- 606
Query: 1014 LTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRL 1073
TFFI+ H AI+ E WPR I ANG +L KMSKS+ N L L AV+ + D +R
Sbjct: 607 -TFFIFNHVAIFPRE--KWPRQIVANGWVLREGEKMSKSKRNVLPLDRAVEMYGPDPLRA 663
Query: 1074 CLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQD---SFNDKVFL 1130
LA + + +D +F ++ A +L + I L G+++ ++ D+ +
Sbjct: 664 TLALAAEVEQDLDFRDAEARRNAQQLMS-------IYTLAQRLVQGAEERPPTWVDQWLV 716
Query: 1131 SEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQA 1190
+E++ ++ + Y K+ ++A + +A D+Y L E + + + A
Sbjct: 717 AEISRVLERAREAYEKVRVRQAAVEVLYNAKAVFDQY--LAMVEKPSRQA--VEAAKAWA 772
Query: 1191 LLLCPVCPHVAEHVYQLLG 1209
+ + P+ PH+AE ++ LG
Sbjct: 773 VAMEPLVPHLAEELWATLG 791
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 104/194 (53%), Gaps = 14/194 (7%)
Query: 409 RSARNMAYQGFTEVEGKINVLLRLTGQVCIRSGDECVV-ALCDQWYLDYGEPTWKAAAEQ 467
R AR + TE + + V R G E VV L DQW+++YGE WK AA +
Sbjct: 416 REAREFIARWLTEARLGGVMYDIMNKPVYCRCGTEIVVKVLEDQWFINYGESRWKEAARE 475
Query: 468 CLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYT 527
+ M+ E R F A+++WL + AC+RT GLGT LPW W+IESLSDSTIYMA+YT
Sbjct: 476 LVKEMSIVPGEARAQFLATIDWLDKRACARTRGLGTPLPWSSGWVIESLSDSTIYMAFYT 535
Query: 528 VAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKSAP---FPPKCRVPKAKLDIMRRE 584
V ++ I+ E LT E WD+VF K VP L +R E
Sbjct: 536 VVKRIR----------QFGIRPEQLTEEFWDFVFLGQGSADEVSKKTGVPVEALKAIREE 585
Query: 585 FQYWYPVDLRCSGK 598
F+YWYP+D R SGK
Sbjct: 586 FEYWYPLDSRNSGK 599
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 113/269 (42%), Gaps = 58/269 (21%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
K+F T +PY NG +H+GH + + RF R G+ VLFP GFH TG PI A+
Sbjct: 35 KYFITAAYPYPNGAIHIGHGRTYLVADVMARFQRHLGRSVLFPMGFHYTGTPILTIAE-- 92
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
V AG + M+ G
Sbjct: 93 ------------------------------------------VIAAGDKAVMEEYMELYG 110
Query: 209 LEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRL 268
+ ++EI+K D + +F + + + G+ +DW R F T D P + F++WQF +L
Sbjct: 111 VPEEEIKKMGDPLYLARYFHGQSKRAMERFGLSIDWTREFTTID--PEYQRFIQWQFEKL 168
Query: 269 RDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDSK 328
R + I G+ + PR + P HD + ++TL+ DS+
Sbjct: 169 RKKGLIVRGRHPVGWCPRHSMPVGAHDTKDDKEPDIGQWTLVYF------------TDSE 216
Query: 329 PVFLVAATLRPETMYGQTNAWVRPDMAYI 357
+ ATLRPET+ G TN W+ PD Y+
Sbjct: 217 GLTFPTATLRPETVLGVTNLWINPDAEYV 245
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 49/239 (20%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLTFFI+ H AI+ E WPR I ANG +L KMSKS+ N L L AV+
Sbjct: 598 GKDLIPNHLTFFIFNHVAIFPRE--KWPRQIVANGWVLREGEKMSKSKRNVLPLDRAVEM 655
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ D +R LA + + +D +F ++ A ++
Sbjct: 656 YGPDPLRATLALAAEVEQDLDFRDAEARRNAQQ--------------------------- 688
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQD---SFNDKVFLSEMNLKIKETEDHYTKMLF 1385
++ +YT + L G+++ ++ D+ ++E++ ++ + Y K+
Sbjct: 689 ---LMSIYTLAQ----------RLVQGAEERPPTWVDQWLVAEISRVLERAREAYEKVRV 735
Query: 1386 KEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHVEMNL 1444
++A + +A D+Y L E + + + A+ + P+ PH+AE + L
Sbjct: 736 RQAAVEVLYNAKAVFDQY--LAMVEKPSRQA--VEAAKAWAVAMEPLVPHLAEELWATL 790
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
+ T LPW W+IESLSDSTIYMA+YTV ++ R E
Sbjct: 509 LGTPLPWSSGWVIESLSDSTIYMAFYTVVKRIRQFGIRPEQ 549
Score = 37.7 bits (86), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 20/102 (19%)
Query: 681 IQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQEVKKLLQKKIDIIGVALKAPVT 740
+ ++ D + +++ Y F G+ ++ E +G+ + +G ++ PVT
Sbjct: 245 VVAEFDGRRAVVSRDAAYRLSFQVGVKILREARGR-------------EFVGRMVQNPVT 291
Query: 741 SHSVIYTLPMLSIR---EDKGTGIVTSVPSDSPDDYAALVDL 779
V P+ R GTG+V SVP+ +P DYAAL DL
Sbjct: 292 GEWV----PVYEARFVDPKVGTGVVMSVPAHAPYDYAALRDL 329
>sp|Q970Z6|SYL2_SULTO Leucine--tRNA ligase 2 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=leuS2 PE=3 SV=2
Length = 944
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 202/432 (46%), Gaps = 84/432 (19%)
Query: 793 DEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYG 852
+E+ V L DQW+LDYG P WKA A++ ++NM E+R++F +WL + AC+RT G
Sbjct: 432 NEVVVKILKDQWFLDYGNPQWKALAKKLISNMKFIPPEIRKDFEFVTDWLQKRACARTRG 491
Query: 853 LGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYV 912
LGT LPWD++W+IESLSDSTIYMAYYT++H ++ +K LT + W+Y+
Sbjct: 492 LGTPLPWDKKWIIESLSDSTIYMAYYTISHKIR----------QYQLKPSQLTYDFWNYI 541
Query: 913 FFKAA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQNHLTFFIYIHTAIWG 969
+ + K + MR EF YWYP+D
Sbjct: 542 MLGIGDIDKISSETGISKEIIREMRNEFLYWYPLD------------------------- 576
Query: 970 DEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHLTFFIYIHTAIWGDEP 1029
IR +G DLI NHL+FFI+ H AI+ +E
Sbjct: 577 ---------IRHSG-----------------------KDLIPNHLSFFIFNHAAIFPEE- 603
Query: 1030 EMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLCLADSGDSVEDANFVE 1089
+WP+ I NG +L KMSKS N + L +A++ +S D +R+ L + D D NF +
Sbjct: 604 -LWPKAIAVNGFVLYEGKKMSKSLRNIIPLRKALRIYSPDVVRIALTSTADMGSDVNFSD 662
Query: 1090 SMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLF 1149
S A + L + E++KE+ G F + ++++ + + + + F
Sbjct: 663 SYAKSVGEILRRYYEFIKELPKYD-----GEGSEFANNWLKAQVSSIVLSSTKNMDNIDF 717
Query: 1150 KEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHVYQLL 1208
+ + + + +Y ++ A+G +LR +E LL P PH AE ++ L
Sbjct: 718 RSTINDILYSFDSYLREYIDMCKADGKEPNGKLLREVIETWIKLLAPFAPHFAEEIWHEL 777
Query: 1209 GKDLIQNHLTFF 1220
G H TF
Sbjct: 778 G------HTTFI 783
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 102/167 (61%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVVA-LCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G+E VV L DQW+LDYG P WKA A++ ++NM E+R++F +WL + A
Sbjct: 426 VYCRCGNEVVVKILKDQWFLDYGNPQWKALAKKLISNMKFIPPEIRKDFEFVTDWLQKRA 485
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+RT GLGT LPWD++W+IESLSDSTIYMAYYT++H ++ +K LT
Sbjct: 486 CARTRGLGTPLPWDKKWIIESLSDSTIYMAYYTISHKIR----------QYQLKPSQLTY 535
Query: 555 EVWDYVFFKSA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
+ W+Y+ + + K + MR EF YWYP+D+R SGK
Sbjct: 536 DFWNYIMLGIGDIDKISSETGISKEIIREMRNEFLYWYPLDIRHSGK 582
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 125/290 (43%), Gaps = 65/290 (22%)
Query: 84 SSPD---DKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMP 140
++PD +KFFTT FPY N HLGH + C+ R+ R+KG VLFP GFH TG P
Sbjct: 20 ANPDRTRNKFFTTVAFPYPNSPFHLGHGRTYVTCDIYARYMRMKGYNVLFPMGFHYTGTP 79
Query: 141 IKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQ 200
I A AD D +KG K
Sbjct: 80 IIAMAD----------------------------------DVAKGDKELI---------- 95
Query: 201 WQIMQSL-GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDS 259
I +++ + D+ I K AD ++F + ++ IG+ +DWRR F T D P F S
Sbjct: 96 -DIFKNIYEIPDNVISKLADPLFMANYFRDEIKKAMKEIGLSIDWRREFTTID--PEFSS 152
Query: 260 FVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYP 319
F+ WQF +L+++ I + P + P HD E+ LI
Sbjct: 153 FIVWQFNKLQEKGYIVRDTHPVGWCPVHHIPVGMHDTKGDMEPEIGEFVLI--------- 203
Query: 320 AKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFL 369
+S L AATLRPET++G WV PD+ Y ++ LD K + +
Sbjct: 204 ----YFNSDLGILPAATLRPETVFGAIGIWVNPDVTY-SIIELDGKKMIV 248
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHL+FFI+ H AI+ +E +WP+ I NG +L KMSKS N + L +A++
Sbjct: 581 GKDLIPNHLSFFIFNHAAIFPEE--LWPKAIAVNGFVLYEGKKMSKSLRNIIPLRKALRI 638
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+S D +R+ L + D D NF +S A +
Sbjct: 639 YSPDVVRIALTSTADMGSDVNFSDSYAKSV------------------------------ 668
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
ILR Y E++KE+ G F + ++++ + + + + F+
Sbjct: 669 -GEILRRYY--EFIKELPKYD-----GEGSEFANNWLKAQVSSIVLSSTKNMDNIDFRST 720
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHV 1440
+ + + +Y ++ A+G +LR +E LL P PH AE +
Sbjct: 721 INDILYSFDSYLREYIDMCKADGKEPNGKLLREVIETWIKLLAPFAPHFAEEI 773
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 30/33 (90%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQ 631
+ T LPWD++W+IESLSDSTIYMAYYT++H ++
Sbjct: 492 LGTPLPWDKKWIIESLSDSTIYMAYYTISHKIR 524
>sp|Q12WA2|SYL_METBU Leucine--tRNA ligase OS=Methanococcoides burtonii (strain DSM 6242)
GN=leuS PE=3 SV=1
Length = 962
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 256/566 (45%), Gaps = 134/566 (23%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIML--VGEFKGKK 716
+ +I+V E+G A+ E+ ++ Q+D K +EA ++VY + F+ G++ G++ G
Sbjct: 351 ISLIKVKEFGEFPAIEAVEQFGVKDQDDP-KAEEATKIVYRREFHGGVLKENTGKYSGMA 409
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V ++K +L + + +G+ V Y +++
Sbjct: 410 VSKIKDVLTRDLIEMGIG--------EVFY-------------------------EFSEP 436
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNF 835
V + P CVV + QW+L+Y P WK +C+ NM+ +++R F
Sbjct: 437 VVCRCGTP-----------CVVNMVKGQWFLNYSNPEWKDKVYRCIENMDIIPEDLRVEF 485
Query: 836 GASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGN 895
++WL + AC+R GLGT LP+D QWLIESL DSTIYM+YY +A +
Sbjct: 486 NNKVDWLKDKACARKKGLGTLLPFDNQWLIESLGDSTIYMSYYIIAKFI----------- 534
Query: 896 ALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRR---EFQYWYPVDLRCSGKDL 952
A+ I+ E L PE++D+V K +I+ + +F+YWYPVD
Sbjct: 535 AMGIETEQLVPELFDHVLLKKCSLETAAERSGIDANIIEQISSDFEYWYPVD-------- 586
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
+R++G DLI N
Sbjct: 587 --------------------------LRSSG-----------------------KDLIPN 597
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
HL FF++ H AI+ ++ WPR I NG + L KMSKS+G LTL +A+ + AD R
Sbjct: 598 HLLFFLFHHVAIFDEDK--WPRAIAINGFVSLEGKKMSKSKGPLLTLNDAITNYGADISR 655
Query: 1073 LCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFN--DKVFL 1130
+ + S + ++DA++ S + ++ F + K+I+ S + T + ++ DK L
Sbjct: 656 MYILSSAEQMQDADWKNSGIETARKQIERFYNFSKDIIG--SGIPTCNVENLKGIDKWML 713
Query: 1131 SEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQA 1190
S + +I ET + + + AL+ +F L Y++ GG L+ ++V
Sbjct: 714 SRLQQRILETNEALDTIRTRNALQNAYFLLFNDIRWYQK----RGG--NALLCEVLDVWI 767
Query: 1191 LLLCPVCPHVAEHVYQLLG---KDLI 1213
L+ P PH+ E +++ +G DLI
Sbjct: 768 RLMAPFTPHICEEIWEAIGHTDNDLI 793
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 97/175 (55%), Gaps = 15/175 (8%)
Query: 428 VLLRLTGQVCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGAS 486
V + V R G CVV + QW+L+Y P WK +C+ NM+ +++R F
Sbjct: 429 VFYEFSEPVVCRCGTPCVVNMVKGQWFLNYSNPEWKDKVYRCIENMDIIPEDLRVEFNNK 488
Query: 487 LNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALN 546
++WL + AC+R GLGT LP+D QWLIESL DSTIYM+YY +A + A+
Sbjct: 489 VDWLKDKACARKKGLGTLLPFDNQWLIESLGDSTIYMSYYIIAKFI-----------AMG 537
Query: 547 IKAEDLTPEVWDYVFFKSAPFPPKCRVPKAKLDIMRR---EFQYWYPVDLRCSGK 598
I+ E L PE++D+V K +I+ + +F+YWYPVDLR SGK
Sbjct: 538 IETEQLVPELFDHVLLKKCSLETAAERSGIDANIIEQISSDFEYWYPVDLRSSGK 592
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 142/336 (42%), Gaps = 76/336 (22%)
Query: 68 KFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKR 127
K+++K E V +A + DK+F T P+PY+NG LH GHT + + + R+ R+ G
Sbjct: 13 KWQQKWNESKVFEA-EADDRDKYFITIPYPYLNGNLHAGHTRTFTIGDVVARYKRMMGNN 71
Query: 128 VLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKK 187
VL+P GFH TG PI A+ + ++ +P+T K
Sbjct: 72 VLYPMGFHVTGTPIVGLAELI---------------QNRDPETMK--------------- 101
Query: 188 SKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRT 247
+ G+ + ++ +D+F A + +RSIG +DWRR
Sbjct: 102 --------------VYTEFHGIPVETLKGMDTPEKIVDYFSVEAERSMRSIGYSIDWRRK 147
Query: 248 FITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEY 307
F TTD N + F+ WQF L ++ I G + P D+ P DHD GE +Y
Sbjct: 148 FTTTDPN--YKKFIEWQFNLLYEKDLIVKGSHPVKWCPNDDNPVEDHDILHGEEATIIDY 205
Query: 308 TLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPV 367
TL+K + + + ATLRPET++G TN W+ PD+ ++ +
Sbjct: 206 TLVKFKY-------------DGMIIPCATLRPETVFGVTNLWINPDLEHVKIKV------ 246
Query: 368 FLVAATLRPETMYGQTNAWVRPDMAYIAFTTATGEV 403
T G+ WV AY EV
Sbjct: 247 ----------TFEGREEVWVVSKEAYRKLIFTDREV 272
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 45/234 (19%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHL FF++ H AI+ ++ WPR I NG + L KMSKS+G LTL +A+
Sbjct: 591 GKDLIPNHLLFFLFHHVAIFDEDK--WPRAIAINGFVSLEGKKMSKSKGPLLTLNDAITN 648
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ AD R+ + S + ++DA++ S + A K+
Sbjct: 649 YGADISRMYILSSAEQMQDADWKNSGIETARKQ--------------------------- 681
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFN--DKVFLSEMNLKIKETEDHYTKMLFK 1386
I R Y F K+I+ S + T + ++ DK LS + +I ET + + +
Sbjct: 682 ---IERFYNF---SKDIIG--SGIPTCNVENLKGIDKWMLSRLQQRILETNEALDTIRTR 733
Query: 1387 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
AL+ +F L Y++ GG L+ ++V L+ P PH+ E +
Sbjct: 734 NALQNAYFLLFNDIRWYQK----RGG--NALLCEVLDVWIRLMAPFTPHICEEI 781
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 592 DLRCSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGG 633
D C+ K + T LP+D QWLIESL DSTIYM+YY +A + G
Sbjct: 494 DKACARKKGLGTLLPFDNQWLIESLGDSTIYMSYYIIAKFIAMG 537
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 730 IIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREKY 789
+IG+ + P+ VI TLP ++ + G+GIV SVPS +P DY AL DL K RE Y
Sbjct: 283 LIGIKVTNPLNDAQVI-TLPASFVKGENGSGIVMSVPSHAPYDYLALRDLYDK-DLRE-Y 339
Query: 790 HVTDEM 795
+T+++
Sbjct: 340 GITEDL 345
>sp|O33768|SYL2_SULSO Leucine--tRNA ligase 2 OS=Sulfolobus solfataricus (strain ATCC 35092
/ DSM 1617 / JCM 11322 / P2) GN=leuS2 PE=3 SV=2
Length = 944
Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 159/552 (28%), Positives = 235/552 (42%), Gaps = 109/552 (19%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+P+I V GN A V EK +S D KL E VY + G++ +
Sbjct: 331 IPVITVEGLGNALAKDVVEKNNPKSDEDLKKLTE---YVYRTEYNKGVL-----RSDLGN 382
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
+++ + ++ +G PV + T ++S KG G + +
Sbjct: 383 LIREEYRNELKSLG---GLPVPKGRELITNFLIS----KGLG-------------RKIFE 422
Query: 779 LKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGAS 838
+ KP + E+ V L DQW+LDY WK A + L+ +N +E R++F +
Sbjct: 423 VMNKPVY---CRCGTEIVVKILKDQWFLDYSNKEWKELARKSLSKINVIPEESRKDFEFT 479
Query: 839 LNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALN 898
+ WL + AC+RT GLGT LPWD++W+IESLSDSTIYMAYYT++H ++
Sbjct: 480 IEWLEKRACARTRGLGTPLPWDKKWIIESLSDSTIYMAYYTISHKIK----------QYK 529
Query: 899 IKAEDLTPEVWDYVFFKAA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQN 955
+ LT E WDYV K +P + R EF YWYP+D
Sbjct: 530 LSPSKLTQEFWDYVMLGIGNLEEISEKTGIPSNIIKEFREEFLYWYPLD----------- 578
Query: 956 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHLT 1015
IR +G DLI NHLT
Sbjct: 579 -----------------------IRHSG-----------------------KDLIPNHLT 592
Query: 1016 FFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLCL 1075
FFI+ H AI+ + +WP+ I NG +L KMSKS N + L + +K + D MR+ +
Sbjct: 593 FFIFNHAAIF--QENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLRKGLKMYGVDVMRIAV 650
Query: 1076 ADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNL 1135
+ + D D NF ES+ L E K + TG F +K LS +
Sbjct: 651 SSTADMGSDVNFSESLVKTVGETLRKMYELFKSL-----DNYTGDILGFPEKWLLSRIYE 705
Query: 1136 KIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFV-EVQALLLC 1194
T H + ++A+ F + D+Y + +AEG VLR V + L+
Sbjct: 706 ITSSTTRHMEALELRDAVNELLFVFSSDLDEYFGMVSAEGREANNKVLREVLTIWLKLIT 765
Query: 1195 PVCPHVAEHVYQ 1206
P PH+AE ++
Sbjct: 766 PFAPHLAEEIWH 777
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 96/167 (57%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVVA-LCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G E VV L DQW+LDY WK A + L+ +N +E R++F ++ WL + A
Sbjct: 428 VYCRCGTEIVVKILKDQWFLDYSNKEWKELARKSLSKINVIPEESRKDFEFTIEWLEKRA 487
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+RT GLGT LPWD++W+IESLSDSTIYMAYYT++H ++ + LT
Sbjct: 488 CARTRGLGTPLPWDKKWIIESLSDSTIYMAYYTISHKIK----------QYKLSPSKLTQ 537
Query: 555 EVWDYVFFKSA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E WDYV K +P + R EF YWYP+D+R SGK
Sbjct: 538 EFWDYVMLGIGNLEEISEKTGIPSNIIKEFREEFLYWYPLDIRHSGK 584
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 118/298 (39%), Gaps = 64/298 (21%)
Query: 71 EKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLF 130
+KIYE + S P KFFTT FPY N H+GH + + R+ R++G VLF
Sbjct: 15 DKIYE---SNPNPSKP--KFFTTVAFPYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLF 69
Query: 131 PFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKA 190
P FH TG PI A AD + K K
Sbjct: 70 PMAFHYTGTPIMAMADAI------------------------------------AKGDKE 93
Query: 191 VAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFIT 250
+ + Y+ + D I + +D ++F +R IG+ +DWRR F T
Sbjct: 94 LIETFKDIYE--------ISPDVIPRMSDPLFMANYFKEDIKASMREIGLGIDWRREFTT 145
Query: 251 TDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLI 310
D P F SFV WQF +L+ + I + P + P HD E+ LI
Sbjct: 146 ID--PEFSSFVTWQFHKLQSKGYIVKDTHPVGWCPVHHIPVGMHDTKGDVEPEIGEFVLI 203
Query: 311 KMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVF 368
+S+ AATLRPET++G T W+ P Y+ S L K +
Sbjct: 204 -------------YFNSEKGIFPAATLRPETIFGATALWINPSEMYVVASMLGKKMIL 248
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 41/233 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLTFFI+ H AI+ + +WP+ I NG +L KMSKS N + L + +K
Sbjct: 583 GKDLIPNHLTFFIFNHAAIF--QENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLRKGLKM 640
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ D MR+ ++ + D D NF ES+ G+++
Sbjct: 641 YGVDVMRIAVSSTADMGSDVNFSESLVKTV----------------GETLR--------- 675
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
++Y + + TG F +K LS + T H + ++A
Sbjct: 676 -----KMYELFKSLDNY--------TGDILGFPEKWLLSRIYEITSSTTRHMEALELRDA 722
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFV-EVQALLLCPVCPHVAEHV 1440
+ F + D+Y + +AEG VLR V + L+ P PH+AE +
Sbjct: 723 VNELLFVFSSDLDEYFGMVSAEGREANNKVLREVLTIWLKLITPFAPHLAEEI 775
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Query: 594 RCSGKVSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQ 631
R G + T LPWD++W+IESLSDSTIYMAYYT++H ++
Sbjct: 490 RTRG-LGTPLPWDKKWIIESLSDSTIYMAYYTISHKIK 526
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 1449 TEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFV-EVQALLLCPVCP 1507
T H + ++A+ F + D+Y + +AEG VLR V + L+ P P
Sbjct: 710 TTRHMEALELRDAVNELLFVFSSDLDEYFGMVSAEGREANNKVLREVLTIWLKLITPFAP 769
Query: 1508 HVAEHVY-QLLGKKGSIVKARWP--EGGPIDDILVRSSSYLMEAAHAFR 1553
H+AE ++ ++L +K IV WP EG +D++ + Y+ R
Sbjct: 770 HLAEEIWHEILKQKTYIVNEGWPEVEGSKMDELTLLEHEYMKRIVEDIR 818
>sp|Q8TQD3|SYL_METAC Leucine--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC 35395
/ DSM 2834 / JCM 12185 / C2A) GN=leuS PE=3 SV=1
Length = 961
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 249/559 (44%), Gaps = 126/559 (22%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIM--LVGEFKGKK 716
+ +IQVPE+G A + E + I +Q K +EA ++VY + F+ G++ + G+++G
Sbjct: 351 ISLIQVPEFGEFPAKEIVESMGIANQK-APKAEEATKIVYRREFHGGVLKEITGKYRGYP 409
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V ++K +L + + + S ++ +++
Sbjct: 410 VSKIKDVLTRDL---------------------------------IASNAGETFYEFSEP 436
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNF 835
V + P CVV + QW+L+Y P WKA +CL+ M +E R F
Sbjct: 437 VVCRCGTP-----------CVVNMVKGQWFLNYSNPEWKAKVYKCLSQMRIIPEEYRVEF 485
Query: 836 GASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGN 895
++WL + AC+R GLGT+LP+D++WLIESL DSTIYM+YY +A L+ G
Sbjct: 486 ENKVDWLKDKACARRKGLGTRLPFDKEWLIESLGDSTIYMSYYIIARFLERG-------- 537
Query: 896 ALNIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
++ E LT +DYV +A + + + ++ +R F YWYPVD
Sbjct: 538 --DLALEQLTLSFFDYVLLGIGDSAAVSAETGLKQELVEEIRSHFNYWYPVD-------- 587
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
+R++G DL+ N
Sbjct: 588 --------------------------LRSSG-----------------------KDLVPN 598
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
HL FF++ H A++ E E WPR + NG + L KMSKS+G LTL AV + AD R
Sbjct: 599 HLLFFLFHHVALF--EEEKWPRALAVNGFVSLEGQKMSKSKGPILTLESAVSAYGADITR 656
Query: 1073 LCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSE 1132
+ + + + +DA++ ++ D+ ++ F + K+++ + ++ D+ LS
Sbjct: 657 MYILSTAEQTQDADWQKTGIDSARRQVDRFYSFAKDVIESGKRATLSTELKLIDRWMLSR 716
Query: 1133 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALL 1192
M I ET + +EA++ FF L Y+ GG L+ ++ L
Sbjct: 717 MQKYIMETNIALDSIQTREAIQNSFFLLINDVRWYQR----RGG--EALLYYVLDNWVRL 770
Query: 1193 LCPVCPHVAEHVYQLLGKD 1211
+ P PH+ E +++ +G +
Sbjct: 771 MAPFTPHLCEEIWEAMGHE 789
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 123/278 (44%), Gaps = 63/278 (22%)
Query: 83 RSSPD--DKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMP 140
++ PD +KFF T P+PY+NG LH GHT + + + R R+ G VL+P GFH TG P
Sbjct: 25 QADPDKREKFFITIPYPYLNGNLHAGHTRTFTIGDVVARHKRMLGYNVLYPMGFHVTGTP 84
Query: 141 IKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQ 200
I A+ + +PQT
Sbjct: 85 IVGLAELIASR---------------DPQT------------------------------ 99
Query: 201 WQIMQSL-GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDS 259
+ + L G+ D + +D+F A + +R IG +DWRR F TTD P +
Sbjct: 100 MDVYEHLHGIPGDILPTLDTPEKIVDYFKREAEKAMRMIGYSIDWRRKFTTTD--PTYKK 157
Query: 260 FVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYP 319
F+ WQ++RL ++ I G + P DN P DHD GE EYTLIK R
Sbjct: 158 FIEWQYIRLEEKGLIVKGSHPVKWCPNDNNPVEDHDILYGEEATIVEYTLIKFRY----- 212
Query: 320 AKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYI 357
+ L ATLRPET +G TN WV PD+ Y+
Sbjct: 213 --------NDLVLPCATLRPETTFGVTNLWVNPDVDYV 242
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 96/167 (57%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G CVV + QW+L+Y P WKA +CL+ M +E R F ++WL + A
Sbjct: 437 VVCRCGTPCVVNMVKGQWFLNYSNPEWKAKVYKCLSQMRIIPEEYRVEFENKVDWLKDKA 496
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+R GLGT+LP+D++WLIESL DSTIYM+YY +A L+ G ++ E LT
Sbjct: 497 CARRKGLGTRLPFDKEWLIESLGDSTIYMSYYIIARFLERG----------DLALEQLTL 546
Query: 555 EVWDYVFF---KSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
+DYV SA + + + ++ +R F YWYPVDLR SGK
Sbjct: 547 SFFDYVLLGIGDSAAVSAETGLKQELVEEIRSHFNYWYPVDLRSSGK 593
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 41/232 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDL+ NHL FF++ H A++ E E WPR + NG + L KMSKS+G LTL AV
Sbjct: 592 GKDLVPNHLLFFLFHHVALF--EEEKWPRALAVNGFVSLEGQKMSKSKGPILTLESAVSA 649
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ AD R+ + + + +DA++ ++ D+A ++
Sbjct: 650 YGADITRMYILSTAEQTQDADWQKTGIDSARRQVD------------------------- 684
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
R Y+F K+++ + ++ D+ LS M I ET + +EA
Sbjct: 685 -----RFYSF---AKDVIESGKRATLSTELKLIDRWMLSRMQKYIMETNIALDSIQTREA 736
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
++ FF L Y+ GG L+ ++ L+ P PH+ E +
Sbjct: 737 IQNSFFLLINDVRWYQR----RGG--EALLYYVLDNWVRLMAPFTPHLCEEI 782
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Query: 592 DLRCSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGG 633
D C+ + + T+LP+D++WLIESL DSTIYM+YY +A L+ G
Sbjct: 494 DKACARRKGLGTRLPFDKEWLIESLGDSTIYMSYYIIARFLERG 537
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 712 FKGKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPD 771
F + V+ V+ + K I IG+ L P+T VI +LP ++ + G+GIV SVP+ +P
Sbjct: 267 FTDRTVEYVEDVPAKSI--IGIKLTNPITGDEVI-SLPASFVKPENGSGIVMSVPAHAPF 323
Query: 772 DYAALVDL 779
DY AL DL
Sbjct: 324 DYLALRDL 331
>sp|A4YI28|SYL2_METS5 Leucine--tRNA ligase 2 OS=Metallosphaera sedula (strain ATCC 51363 /
DSM 5348) GN=leuS2 PE=3 SV=1
Length = 950
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 252/564 (44%), Gaps = 121/564 (21%)
Query: 657 DPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKK 716
+P+P++ V G+ A + E +ND D L++ E +Y F G+M +
Sbjct: 337 EPIPVVAVEGQGDAPAKDLVES--SHPKNDAD-LKKLTEQLYRLEFNKGLM-----RSDI 388
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
++ VK L+ ++ ++ + P V L I+ GT +
Sbjct: 389 LRLVKDELRAELSVVA-GKQVPEARKMVTDIL----IQRKAGT---------------KM 428
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFG 836
+++ KP + +E+ V L DQW+LDYG P WKA A++ L +M +E R++F
Sbjct: 429 LEIMNKPVY---CRCGNEVVVKILQDQWFLDYGNPEWKAKAKKLLDSMRVIPEETRKDFE 485
Query: 837 ASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNA 896
+L+WL + AC+RT GLGT LPWD++W+IESLSDSTIYMAYYT++H ++
Sbjct: 486 YALDWLQKRACARTRGLGTPLPWDKKWIIESLSDSTIYMAYYTLSHKIK----------E 535
Query: 897 LNIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLI 953
+ LT E WDY+ + ++ L +RR F YWYP+DLR SG DLI
Sbjct: 536 FGLHPSQLTEETWDYIMLGEGDVKAISERNKIGVDALQELRRHFTYWYPLDLRHSGPDLI 595
Query: 954 QNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNH 1013
NHL+FFI+ H I+ + +WPRG+ NG +L K S ++N
Sbjct: 596 PNHLSFFIFNHAGIFPE--NLWPRGVAVNGFILYEGKK--------------MSKSLRNI 639
Query: 1014 LTFFIYIHTAIWGDEPEMWPRGIRANG----HLLLNSAKMSKSEGNFLTLTEAVKKFSAD 1069
+ + IR G + L+S S+ NF TEA + AD
Sbjct: 640 VPL----------------RKAIRTYGADVIRIALSSLVDMSSDANF---TEAGARAIAD 680
Query: 1070 GMRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQ-DSFNDKV 1128
++ R Y ++ ++ GS D +K
Sbjct: 681 NLK-------------------------RFYELMQ-----------MQDGSTIDGTPEKW 704
Query: 1129 FLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVE 1187
S+++ +++ M F+E + F L + ++Y E+ +E + V+R VE
Sbjct: 705 LRSKLHRLVRDVTPLMESMRFREVINELLFNLSSYINEYLEMVRSESREYNRDVIREVVE 764
Query: 1188 VQALLLCPVCPHVAEHVYQLLGKD 1211
L+ P PH+ E ++ LG +
Sbjct: 765 TWTKLMAPFAPHLTEEMWHQLGHN 788
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 108/191 (56%), Gaps = 14/191 (7%)
Query: 411 ARNMAYQGFTEVEGKINVLLRLTGQVCIRSGDECVVA-LCDQWYLDYGEPTWKAAAEQCL 469
AR M + + +L + V R G+E VV L DQW+LDYG P WKA A++ L
Sbjct: 411 ARKMVTDILIQRKAGTKMLEIMNKPVYCRCGNEVVVKILQDQWFLDYGNPEWKAKAKKLL 470
Query: 470 ANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVA 529
+M +E R++F +L+WL + AC+RT GLGT LPWD++W+IESLSDSTIYMAYYT++
Sbjct: 471 DSMRVIPEETRKDFEYALDWLQKRACARTRGLGTPLPWDKKWIIESLSDSTIYMAYYTLS 530
Query: 530 HLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKSAPFPPKCRVPKAKLDI---MRREFQ 586
H ++ + LT E WDY+ K +D +RR F
Sbjct: 531 HKIK----------EFGLHPSQLTEETWDYIMLGEGDVKAISERNKIGVDALQELRRHFT 580
Query: 587 YWYPVDLRCSG 597
YWYP+DLR SG
Sbjct: 581 YWYPLDLRHSG 591
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 122/302 (40%), Gaps = 66/302 (21%)
Query: 61 GHTFS--LSKFREKIYEETVGDAV-RSSPDD--KFFTTFPFPYMNGRLHLGHTFSLSKCE 115
H F+ L++ +K EE + + + P D KFFTT FPY N HLGH + +
Sbjct: 6 SHEFTDLLNEISKKWQEEWSKNRIFEADPKDQKKFFTTVAFPYPNSPFHLGHGRTYVTGD 65
Query: 116 FSVRFNRLKGKRVLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDD 175
RF R+KG VLFP GFH TG PI AD
Sbjct: 66 VYARFMRMKGYNVLFPMGFHFTGTPIITMAD----------------------------- 96
Query: 176 DPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSL-GLEDDEIRKFADASHWLDHFPPLAVQD 234
D +KG K I Q++ + D I K +D ++F
Sbjct: 97 -----DVAKGDKD-----------LLDIFQNIYEIPADVIPKLSDPLFMANYFKEDIKAA 140
Query: 235 LRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDH 294
+R IG+ +DWRR F T D P F +F+ WQF +L+ + + + P N P H
Sbjct: 141 MREIGLSIDWRREFTTID--PQFSAFIVWQFSKLQKKGYVVKDTHPVGWCPVHNLPVGMH 198
Query: 295 DRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDM 354
D EY +I +SK L AATLRPET++G WV P
Sbjct: 199 DTKGDMEPEIGEYVVI-------------FFESKMGALAAATLRPETIFGAVAVWVNPKA 245
Query: 355 AY 356
Y
Sbjct: 246 TY 247
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
G DLI NHL+FFI+ H I+ + +WPRG+ NG +L KMSKS N + L +A++
Sbjct: 591 GPDLIPNHLSFFIFNHAGIFPEN--LWPRGVAVNGFILYEGKKMSKSLRNIVPLRKAIRT 648
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ AD +R+ L+ D DANF E+ A A AD ++
Sbjct: 649 YGADVIRIALSSLVDMSSDANFTEAGARAI-----ADNLK-------------------- 683
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQ-DSFNDKVFLSEMNLKIKETEDHYTKMLFKE 1387
R Y ++ ++ GS D +K S+++ +++ M F+E
Sbjct: 684 -----RFYELMQ-----------MQDGSTIDGTPEKWLRSKLHRLVRDVTPLMESMRFRE 727
Query: 1388 ALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHV 1440
+ F L + ++Y E+ +E + V+R VE L+ P PH+ E +
Sbjct: 728 VINELLFNLSSYINEYLEMVRSESREYNRDVIREVVETWTKLMAPFAPHLTEEM 781
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Query: 594 RCSGKVSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQ 631
R G + T LPWD++W+IESLSDSTIYMAYYT++H ++
Sbjct: 498 RTRG-LGTPLPWDKKWIIESLSDSTIYMAYYTLSHKIK 534
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 1456 MLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHVY 1514
M F+E + F L + ++Y E+ +E + V+R VE L+ P PH+ E ++
Sbjct: 723 MRFREVINELLFNLSSYINEYLEMVRSESREYNRDVIREVVETWTKLMAPFAPHLTEEMW 782
Query: 1515 QLLGKKGSIVKARWP 1529
LG + WP
Sbjct: 783 HQLGHNTFLSLESWP 797
>sp|Q46AW0|SYL_METBF Leucine--tRNA ligase OS=Methanosarcina barkeri (strain Fusaro / DSM
804) GN=leuS PE=3 SV=1
Length = 966
Score = 201 bits (510), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 144/557 (25%), Positives = 248/557 (44%), Gaps = 126/557 (22%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIM--LVGEFKGKK 716
+ +I+VPE+G A + E + I SQ D K +EA ++VY + F+ G++ + G+++G+
Sbjct: 351 ISLIKVPEFGEFPAKEIVESMGITSQKDP-KAEEATKIVYRREFHGGVLKEITGKYEGQA 409
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V ++K +L + ++S ++ +++
Sbjct: 410 VSKIKDILTRDF---------------------------------ISSNTGETFYEFSEP 436
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNF 835
V + P CVV + QW+L+Y P WKA +CLA M +E R F
Sbjct: 437 VVCRCGTP-----------CVVNMVKGQWFLNYSNPEWKAKVYKCLAQMRIVPEEYRVEF 485
Query: 836 GASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGN 895
++WL + AC+R GLGT LP+D++WLIESL DSTIYM+YY +A ++ G
Sbjct: 486 ENKIDWLKDKACARRKGLGTHLPFDKEWLIESLGDSTIYMSYYIIARFIENG-------- 537
Query: 896 ALNIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+K E+LT +DYV +A + L+ +RR F YWYPVDLR SGKDL
Sbjct: 538 --ELKIENLTLSFFDYVLLGKGDSAAASADTGLSPELLEEIRRHFNYWYPVDLRSSGKDL 595
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
+ NHL FF++ H A++ E + WP+ + NG + L K
Sbjct: 596 VPNHLLFFLFHHVALF--EEDKWPKALAVNGFVSLEGQK--------------------- 632
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
++ G +L + +SK + AD R
Sbjct: 633 ----------------------MSKSKGPILTMESAVSK--------------YGADITR 656
Query: 1073 LCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSE 1132
+ + + + +DA++ + ++ ++ F + K ++ + ++ D+ LS
Sbjct: 657 MYILSTAEQTQDADWQRTGIESARRQVDRFYSFAKGVIESGKRADLSTELKQIDRWILSR 716
Query: 1133 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALL 1192
+ I++T + +EA++ FF LQ Y+ GG TL+ ++ L
Sbjct: 717 IQNYIRDTNSALYSIQTREAIQNSFFLLQNDVKWYQR----RGG--ETLLYYVLDNWVRL 770
Query: 1193 LCPVCPHVAEHVYQLLG 1209
+ P PH+ E +++ +G
Sbjct: 771 MAPFTPHLCEEIWEAMG 787
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 132/294 (44%), Gaps = 64/294 (21%)
Query: 83 RSSPD--DKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMP 140
++ PD +KFF T P+PY+NG LH GHT + + + R R+ G VL+P GFH TG P
Sbjct: 25 QAEPDKREKFFITIPYPYLNGNLHAGHTRTFTIGDVVARHKRMLGYNVLYPMGFHVTGTP 84
Query: 141 IKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQ 200
I A+ + + +PQT
Sbjct: 85 IVGLAELIA---------------NRDPQT------------------------------ 99
Query: 201 WQIMQSL-GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDS 259
+ + L G+ D + +D+F + + +R+IG +DWRR F TTD P +
Sbjct: 100 MDVYERLHGIPGDILPTLDTPEKIVDYFKRESEKAMRNIGYSIDWRRKFTTTD--PTYKK 157
Query: 260 FVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYP 319
F+ WQ++RL ++ I G + P DN P DHD GE EYTLIK R
Sbjct: 158 FIEWQYIRLGEKGLIVKGSHPVKWCPNDNNPVEDHDILYGEEATIVEYTLIKFRY----- 212
Query: 320 AKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYI-ALSCLDSKPVFLVAA 372
K + L ATLRPET YG TN WV PD+ Y+ A LD F V +
Sbjct: 213 --------KDLVLPCATLRPETTYGVTNLWVNPDVTYVKAKVTLDGNEEFWVVS 258
Score = 140 bits (353), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 95/167 (56%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G CVV + QW+L+Y P WKA +CLA M +E R F ++WL + A
Sbjct: 437 VVCRCGTPCVVNMVKGQWFLNYSNPEWKAKVYKCLAQMRIVPEEYRVEFENKIDWLKDKA 496
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+R GLGT LP+D++WLIESL DSTIYM+YY +A ++ G +K E+LT
Sbjct: 497 CARRKGLGTHLPFDKEWLIESLGDSTIYMSYYIIARFIENG----------ELKIENLTL 546
Query: 555 EVWDYVFF---KSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
+DYV SA + L+ +RR F YWYPVDLR SGK
Sbjct: 547 SFFDYVLLGKGDSAAASADTGLSPELLEEIRRHFNYWYPVDLRSSGK 593
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDL+ NHL FF++ H A++ E + WP+ + NG + L KMSKS+G LT+ AV K
Sbjct: 592 GKDLVPNHLLFFLFHHVALF--EEDKWPKALAVNGFVSLEGQKMSKSKGPILTMESAVSK 649
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ AD R+ + + + +DA++ + ++A ++
Sbjct: 650 YGADITRMYILSTAEQTQDADWQRTGIESARRQ--------------------------- 682
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
+ R Y+F K ++ + ++ D+ LS + I++T + +EA
Sbjct: 683 ---VDRFYSF---AKGVIESGKRADLSTELKQIDRWILSRIQNYIRDTNSALYSIQTREA 736
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
++ FF LQ Y+ GG TL+ ++ L+ P PH+ E +
Sbjct: 737 IQNSFFLLQNDVKWYQR----RGG--ETLLYYVLDNWVRLMAPFTPHLCEEI 782
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
+ T LP+D++WLIESL DSTIYM+YY +A ++ G + EN
Sbjct: 503 LGTHLPFDKEWLIESLGDSTIYMSYYIIARFIENGELKIEN 543
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 730 IIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDL 779
IIG+ L PVT VI +LP +R + G+GIV SVP+ +P DY AL DL
Sbjct: 283 IIGIKLTNPVTDDEVI-SLPASFVRPENGSGIVMSVPAHAPFDYLALRDL 331
>sp|A6VK04|SYL_METM7 Leucine--tRNA ligase OS=Methanococcus maripaludis (strain C7 / ATCC
BAA-1331) GN=leuS PE=3 SV=1
Length = 955
Score = 200 bits (509), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 246/558 (44%), Gaps = 129/558 (23%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+P+I++ Y A + EKL ++ QND + L++A +Y F+ G
Sbjct: 365 IPLIEIEGYDKFPAKEIVEKLGVKDQNDDELLEQATSKIYKDEFHKG------------- 411
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
KL + + G+++K I+E + S ++ +++
Sbjct: 412 ---KLNENCGEYAGISVK---------------DIKEKLTKDYLNSNIAEIMYEFS---- 449
Query: 779 LKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGA 837
++K R E C++ QW+++Y + WK A +C+ +MN + +R+ F
Sbjct: 450 -EQKVVCR-----CGEKCIIKTVKGQWFINYSDENWKKLAHECIDSMNFAPENIRQEFHN 503
Query: 838 SLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNAL 897
++W+ + AC+R GLGT LP+DE W+IESLSDSTIYMAYYT+A + G
Sbjct: 504 KVDWMKDKACARKKGLGTLLPFDENWIIESLSDSTIYMAYYTIARFINEG---------- 553
Query: 898 NIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQ 954
+ E L PE+++YVF + K ++ MR+EF Y+YP+D RCS
Sbjct: 554 -LTPEQLVPELFEYVFLGNGNVEEIAKNSNISKETIEEMRKEFLYYYPLDWRCS------ 606
Query: 955 NHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHL 1014
AKDLI NHLTF +I NH+
Sbjct: 607 -----------------------------------AKDLIPNHLTF--------MIFNHV 623
Query: 1015 TFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLC 1074
F + E WPRGI NG++ + K+SKS+G L ++E + F AD R
Sbjct: 624 ALF----------KKEHWPRGIEINGYVTIEGKKLSKSKGPVLPVSEVAENFGADVARFY 673
Query: 1075 LADSGDSVEDAN--FVE-SMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLS 1131
+ + +DA+ F E A +++LY V E +TQ S DK L
Sbjct: 674 ITTCAELPQDADVKFKEMEKARDNLIKLYELAVSVMEEESTQKEF------SLIDKWLLH 727
Query: 1132 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1191
+ IK E Y + ++ + F+EL Y+ GG + ++ VE+
Sbjct: 728 KTYSSIKGAETAYEEFQLRK-IGLMFYELINDLRWYKR----RGGENNNVLKEVVEIWTK 782
Query: 1192 LLCPVCPHVAEHVYQLLG 1209
LL PV PH+ E +++ LG
Sbjct: 783 LLSPVTPHLCEEIWEKLG 800
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 100/168 (59%), Gaps = 15/168 (8%)
Query: 435 QVCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEY 493
+V R G++C++ QW+++Y + WK A +C+ +MN + +R+ F ++W+ +
Sbjct: 452 KVVCRCGEKCIIKTVKGQWFINYSDENWKKLAHECIDSMNFAPENIRQEFHNKVDWMKDK 511
Query: 494 ACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLT 553
AC+R GLGT LP+DE W+IESLSDSTIYMAYYT+A + G + E L
Sbjct: 512 ACARKKGLGTLLPFDENWIIESLSDSTIYMAYYTIARFINEG-----------LTPEQLV 560
Query: 554 PEVWDYVFFKSA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
PE+++YVF + + K ++ MR+EF Y+YP+D RCS K
Sbjct: 561 PELFEYVFLGNGNVEEIAKNSNISKETIEEMRKEFLYYYPLDWRCSAK 608
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 88 DKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADK 147
DKFF T FPY+NG LH GH + + E R+ R+K K VL+ FGFH TG PI A++
Sbjct: 42 DKFFITAAFPYLNGVLHAGHLRTFTIPETIARYQRMKNKNVLWTFGFHVTGTPILGLANQ 101
Query: 148 LKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSL 207
+K E W
Sbjct: 102 IKERKEDI--------------------------------------------IWAYNNLH 117
Query: 208 GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMR 267
+ DE+ K ++ F A + + +G +DWRR F T D F F+ WQF +
Sbjct: 118 NIPMDELIKLDTPEAIVECFSKKATEAFKRMGFSLDWRRNFKTDDK--VFSKFIEWQFYK 175
Query: 268 LRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDS 327
L++ I G + P+ P DHD GE EY+LIK D
Sbjct: 176 LKEMGHITKGSHPVRYCPKCENPVEDHDLLHGEESTTVEYSLIKFT---------SEFDG 226
Query: 328 KPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDS 364
K + + ATLRPET++G TNAWV P+ Y+ D
Sbjct: 227 KEIIMPMATLRPETLFGVTNAWVNPNEMYVMAEVYDE 263
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
KDLI NHLTF I+ H A++ + E WPRGI NG++ + K+SKS+G L ++E +
Sbjct: 607 AKDLIPNHLTFMIFNHVALF--KKEHWPRGIEINGYVTIEGKKLSKSKGPVLPVSEVAEN 664
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVE-SM 1327
F AD R + + +DA D F E
Sbjct: 665 FGADVARFYITTCAELPQDA-------------------------------DVKFKEMEK 693
Query: 1328 ADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKE 1387
A +++LY V E +TQ S DK L + IK E Y + ++
Sbjct: 694 ARDNLIKLYELAVSVMEEESTQKEF------SLIDKWLLHKTYSSIKGAETAYEEFQLRK 747
Query: 1388 ALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ F+EL Y+ GG + ++ VE+ LL PV PH+ E +
Sbjct: 748 -IGLMFYELINDLRWYKR----RGGENNNVLKEVVEIWTKLLSPVTPHLCEEI 795
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 581 MRREFQY---WYPVDLRCSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGG 633
+R+EF W D C+ K + T LP+DE W+IESLSDSTIYMAYYT+A + G
Sbjct: 497 IRQEFHNKVDWMK-DKACARKKGLGTLLPFDENWIIESLSDSTIYMAYYTIARFINEG 553
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 703 YDGIMLVGEFKGKKVQEVKKLLQ-----KKIDIIGVALKAPVTSHSVIYTLPMLSIREDK 757
Y+GI +VG+ K++E + ++ K +++G+ +K PVT V P +
Sbjct: 276 YNGIWIVGKECADKLKEQDRKIEILKEIKGSELLGLKIKNPVTKKEVP-LFPADFVEMGI 334
Query: 758 GTGIVTSVPSDSPDDYAALVDLKK 781
GTG V VP+ +P DY AL DL K
Sbjct: 335 GTGCVMGVPAHAPYDYIALRDLGK 358
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 1484 GGMHRTLVLRFVEVQALLLCPVCPHVAEHVYQLLGKKGSIVKARWPE 1530
GG + ++ VE+ LL PV PH+ E +++ LG G I + +PE
Sbjct: 766 GGENNNVLKEVVEIWTKLLSPVTPHLCEEIWEKLGYSGFISQEMYPE 812
>sp|Q8TVM4|SYL_METKA Leucine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=leuS PE=3 SV=1
Length = 943
Score = 200 bits (508), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 182/376 (48%), Gaps = 66/376 (17%)
Query: 657 DPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKK 716
+PV +I+V YG A E+ I+SQ D + L++A + VY + G+M+V EF+G
Sbjct: 345 EPVQVIEVEGYGEFPAYDALEEHGIESQTDPE-LEKATQEVYRAELHKGVMVVDEFEGTP 403
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V+E ++ ++ ++ G D +
Sbjct: 404 VREAREEIKSRLIESG---------------------------------------DADVM 424
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFG 836
D +KP E V L DQW+L Y + WK AE+ L M +EVR NF
Sbjct: 425 YDFSEKPVI---CRCGTECVVRILKDQWFLRYSDGEWKERAEELLGRMEIVPEEVRANFE 481
Query: 837 ASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNA 896
++ WL ++AC+R GLGT LPWD W++E LSDST+YMAYYT+AH L+G +GE
Sbjct: 482 DTIEWLDDWACARRVGLGTPLPWDPDWIVEPLSDSTVYMAYYTIAHRLKG---KGE---- 534
Query: 897 LNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDI-----MRREFQYWYPVDLRCSGKD 951
L PEV+DYVF P+ KA LD+ MR EF+YWYP++ R S KD
Sbjct: 535 -------LPPEVFDYVFLGEG--DPEEIAEKAGLDVEELEAMREEFEYWYPLNWRLSAKD 585
Query: 952 LIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQ 1011
L+ NHLTFFI+ H A++ + + WP+GI G LL K + + +
Sbjct: 586 LVTNHLTFFIFHHAALFPE--DKWPKGIVVFGMGLLEGQKMSSSKGNVVLLSEALDEYGP 643
Query: 1012 NHLTFFIYIHTAIWGD 1027
+ + F+ W D
Sbjct: 644 DVVRLFLATSAEPWQD 659
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 101/169 (59%), Gaps = 22/169 (13%)
Query: 436 VCIRSGDECVV-ALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G ECVV L DQW+L Y + WK AE+ L M +EVR NF ++ WL ++A
Sbjct: 432 VICRCGTECVVRILKDQWFLRYSDGEWKERAEELLGRMEIVPEEVRANFEDTIEWLDDWA 491
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+R GLGT LPWD W++E LSDST+YMAYYT+AH L+G +GE L P
Sbjct: 492 CARRVGLGTPLPWDPDWIVEPLSDSTVYMAYYTIAHRLKG---KGE-----------LPP 537
Query: 555 EVWDYVFFKSAPFPPKCRVPKAKLDI-----MRREFQYWYPVDLRCSGK 598
EV+DYVF P+ KA LD+ MR EF+YWYP++ R S K
Sbjct: 538 EVFDYVFLGEG--DPEEIAEKAGLDVEELEAMREEFEYWYPLNWRLSAK 584
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 134/281 (47%), Gaps = 61/281 (21%)
Query: 84 SSPDDK--FFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPI 141
+ PDD+ + T +PY +G +H+GH + + RF R++G VLFP FH TG P+
Sbjct: 21 ADPDDRESVYITVAYPYPSGSMHVGHARTYLVPDIYARFKRMQGYNVLFPMAFHVTGTPV 80
Query: 142 KACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQW 201
A+++K + D+D +
Sbjct: 81 VGIAERIK----------------------EGDEDTI----------------------- 95
Query: 202 QIMQSL-GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSF 260
++ + L G+ ++E+ KF + +++F ++++ +G +DWRR F T D P + SF
Sbjct: 96 RLYRDLYGVPEEELEKFTEPEAIVEYFAREYEENMKRMGYSIDWRRKFTTVD--PEYRSF 153
Query: 261 VRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPA 320
+ WQ++RLR++ + G+ + P P DHD GE +E TL+K +P
Sbjct: 154 ITWQYLRLREKGLVDKGEHPVRYCPHCENPVGDHDLLEGEDATIEELTLVK------FP- 206
Query: 321 KLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSC 361
++ + LVAAT RPET+YG TN WV+PD Y+ +
Sbjct: 207 ----VEGDDLILVAATFRPETLYGATNVWVKPDEEYLVVEV 243
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 1008 DLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFS 1067
DL+ NHLTFFI+ H A++ ++ WP+GI G LL KMS S+GN + L+EA+ ++
Sbjct: 585 DLVTNHLTFFIFHHAALFPED--KWPKGIVVFGMGLLEGQKMSSSKGNVVLLSEALDEYG 642
Query: 1068 ADGMRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDK 1127
D +RL LA S + +D ++ D + + +E + ++ + +D+ D+
Sbjct: 643 PDVVRLFLATSAEPWQDFDW----RDEYVRGVQRHLERFETLIRDHADESVEDKDAV-DR 697
Query: 1128 VFLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVE 1187
FL E ++ET + + A F+ + RE A +G H ++ E
Sbjct: 698 WFLHEFREVVEETTEALEGFQIRRAYNRAFYGVMKL---LREYEAMKG--HVKILGEIAE 752
Query: 1188 VQALLLCPVCPHVAEHVY-QLLGKD 1211
LL PV P + ++ ++LG+D
Sbjct: 753 DWLKLLHPVIPFATDRLWREVLGED 777
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 1205 YQLLGKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTE 1264
++L KDL+ NHLTFFI+ H A++ ++ WP+GI G LL KMS S+GN + L+E
Sbjct: 579 WRLSAKDLVTNHLTFFIFHHAALFPED--KWPKGIVVFGMGLLEGQKMSSSKGNVVLLSE 636
Query: 1265 AVKKFSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFV 1324
A+ ++ D +RL LA S + +D ++ + V++ L + +SVED + V
Sbjct: 637 ALDEYGPDVVRLFLATSAEPWQDFDWRDEYV-RGVQRHLERFETLIRDHADESVEDKDAV 695
Query: 1325 E 1325
+
Sbjct: 696 D 696
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 592 DLRCSGKVS--TKLPWDEQWLIESLSDSTIYMAYYTVAHLLQG 632
D C+ +V T LPWD W++E LSDST+YMAYYT+AH L+G
Sbjct: 489 DWACARRVGLGTPLPWDPDWIVEPLSDSTVYMAYYTIAHRLKG 531
>sp|Q8Q054|SYL_METMA Leucine--tRNA ligase OS=Methanosarcina mazei (strain ATCC BAA-159 /
DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=leuS PE=3
SV=2
Length = 966
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 243/559 (43%), Gaps = 126/559 (22%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIM--LVGEFKGKK 716
+ +IQVPE+G A + E + I Q D K +EA ++VY + F+ G++ L G++KG
Sbjct: 351 ISLIQVPEFGEFPAKEIVESMGISDQKDP-KAEEATKIVYRREFHGGVLKELTGKYKG-- 407
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
P+ I++ + S ++ +++
Sbjct: 408 -------------------------------YPVSKIKDILTRDFLASNAGETFYEFSEP 436
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNF 835
V + P CVV + QW+L+Y P WKA +CL M E R F
Sbjct: 437 VVCRCGTP-----------CVVNMVKGQWFLNYSNPDWKAKVYKCLGQMRVIPTEYRVEF 485
Query: 836 GASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGN 895
++WL + AC+R GLGT+LP+D++WLIESL DSTIYM+YY +A ++ G
Sbjct: 486 ENKIDWLKDKACARRKGLGTRLPFDKEWLIESLGDSTIYMSYYIIARFIEKG-------- 537
Query: 896 ALNIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
+ E LT +DYV +A + + ++ +R F YWYPVD
Sbjct: 538 --ELALEHLTLSFFDYVLLGKGDSAAVSAETGLKPELIEEIRSHFNYWYPVD-------- 587
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQN 1012
+R++G DL+ N
Sbjct: 588 --------------------------LRSSG-----------------------KDLVPN 598
Query: 1013 HLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMR 1072
HL FF++ H A++ E E WP+ + NG + L KMSKS+G LTL AV + AD R
Sbjct: 599 HLLFFLFHHVALF--EEEKWPKALAVNGFVSLEGQKMSKSKGPILTLESAVSSYGADITR 656
Query: 1073 LCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSE 1132
+ + + + +DA++ ++ D+ ++ F + K+++ + ++ D+ LS
Sbjct: 657 MYILSTAEQTQDADWQKAGIDSARRQVDRFYAFAKDVIESGKRGTLSAELKQIDRWMLSR 716
Query: 1133 MNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALL 1192
M IKET + +EA++ FF L Y+ GG L+ ++ L
Sbjct: 717 MQNYIKETNAALDSIQTREAIQNSFFLLINDVRWYQR----RGG--EALLYYVLDNWVRL 770
Query: 1193 LCPVCPHVAEHVYQLLGKD 1211
+ P PH+ E V++ +G +
Sbjct: 771 MAPFTPHLCEEVWEAMGHE 789
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 123/278 (44%), Gaps = 63/278 (22%)
Query: 83 RSSPD--DKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMP 140
++ PD +KFF T P+PY+NG LH GHT + + + R R+ G VL+P GFH TG P
Sbjct: 25 QAEPDKREKFFITIPYPYLNGNLHAGHTRTFTIGDVVARHKRMLGYNVLYPMGFHVTGTP 84
Query: 141 IKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQ 200
I A+ + +PQT
Sbjct: 85 IVGLAELIASR---------------DPQT------------------------------ 99
Query: 201 WQIMQSL-GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDS 259
+ + L G+ D + +D+F A + +R IG +DWRR F TTD P +
Sbjct: 100 MDVYERLHGIPGDILPALDTPEKIVDYFKVEAEKAMRMIGYSIDWRRKFTTTD--PTYKK 157
Query: 260 FVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYP 319
F+ WQ+ RL ++ I G + P DN P DHD GE EYTLIK R
Sbjct: 158 FIEWQYTRLEEKDLIVKGSHPVKWCPNDNNPVEDHDILHGEEATIVEYTLIKFRY----- 212
Query: 320 AKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYI 357
+ + L ATLRPET YG TN WV P++ Y+
Sbjct: 213 --------RDLVLPCATLRPETTYGVTNLWVNPNVDYV 242
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G CVV + QW+L+Y P WKA +CL M E R F ++WL + A
Sbjct: 437 VVCRCGTPCVVNMVKGQWFLNYSNPDWKAKVYKCLGQMRVIPTEYRVEFENKIDWLKDKA 496
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+R GLGT+LP+D++WLIESL DSTIYM+YY +A ++ G + E LT
Sbjct: 497 CARRKGLGTRLPFDKEWLIESLGDSTIYMSYYIIARFIEKG----------ELALEHLTL 546
Query: 555 EVWDYVFF---KSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
+DYV SA + + ++ +R F YWYPVDLR SGK
Sbjct: 547 SFFDYVLLGKGDSAAVSAETGLKPELIEEIRSHFNYWYPVDLRSSGK 593
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 41/232 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDL+ NHL FF++ H A++ E E WP+ + NG + L KMSKS+G LTL AV
Sbjct: 592 GKDLVPNHLLFFLFHHVALF--EEEKWPKALAVNGFVSLEGQKMSKSKGPILTLESAVSS 649
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ AD R+ + + + +DA++ ++ D+A ++
Sbjct: 650 YGADITRMYILSTAEQTQDADWQKAGIDSARRQ--------------------------- 682
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
+ R Y F K+++ + ++ D+ LS M IKET + +EA
Sbjct: 683 ---VDRFYAF---AKDVIESGKRGTLSAELKQIDRWMLSRMQNYIKETNAALDSIQTREA 736
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
++ FF L Y+ GG L+ ++ L+ P PH+ E V
Sbjct: 737 IQNSFFLLINDVRWYQR----RGG--EALLYYVLDNWVRLMAPFTPHLCEEV 782
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 592 DLRCSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
D C+ + + T+LP+D++WLIESL DSTIYM+YY +A ++ G E+
Sbjct: 494 DKACARRKGLGTRLPFDKEWLIESLGDSTIYMSYYIIARFIEKGELALEH 543
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 712 FKGKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPD 771
F + V+ V+ + K I IG+ L PVT VI +LP ++ + G+GIV SVP+ +P
Sbjct: 267 FTDRTVEYVEDMPAKSI--IGIKLTNPVTGDEVI-SLPASFVKPENGSGIVMSVPAHAPF 323
Query: 772 DYAALVDL 779
DY AL DL
Sbjct: 324 DYLALRDL 331
>sp|A3MU00|SYL_PYRCJ Leucine--tRNA ligase OS=Pyrobaculum calidifontis (strain JCM 11548 /
VA1) GN=leuS PE=3 SV=1
Length = 946
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 168/569 (29%), Positives = 250/569 (43%), Gaps = 126/569 (22%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+P+I+V YG A V E++ I+SQ D L+EA VY + G+
Sbjct: 335 IPLIRVEGYGEYPAKEVVERMGIKSQTDP-ALEEATREVYSAEYTRGV------------ 381
Query: 719 EVKKLLQKKIDIIGVALKAPVTSH-SVIYTL-----PMLSIRE-------DKGTGIVTSV 765
+ + +D I L P S ++ L P+ RE + G G V
Sbjct: 382 ----VREDVVDRIAPHLPEPARSMVRAVFKLYFAGRPVKEAREFISKWLAEAGLGGV--- 434
Query: 766 PSDSPDDYAALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMN 825
+ D+ KP + E+ V L DQW+++YGE WK A Q + M
Sbjct: 435 ----------MYDIMNKPVY---CRCGTEIVVKVLEDQWFINYGERGWKQLARQLVEEMA 481
Query: 826 TYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQ 885
E + F A+++WL + AC+RT GLGT LPW + W+IESLSDSTIYMA+YTV ++
Sbjct: 482 IIPQEAKAQFLATIDWLDKRACARTRGLGTPLPWSQGWVIESLSDSTIYMAFYTVIKKIR 541
Query: 886 GGTFRGENGNALNIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYP 942
AL ++ E LT E WDYVF AA + V A L+ +RREF YWYP
Sbjct: 542 ----------ALGLRPEQLTEEFWDYVFLGQGSAAEVAKRIGVDPAALEEIRREFDYWYP 591
Query: 943 VDLRCSGKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFI 1002
+D R SGKDLI NHLTFFI+ H AI+ E WPR I ANG +L K
Sbjct: 592 LDSRNSGKDLIPNHLTFFIFNHVAIFPR--EKWPRQIVANGWVLREGEK----------- 638
Query: 1003 YKLFSDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEA 1062
S +N L + A++G +P +RA L A + + +F
Sbjct: 639 ---MSKSKRNVLPLDKAV--ALYGPDP------LRAT----LAIAAEVEQDLDFR----- 678
Query: 1063 VKKFSADGMRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQD 1122
A+ R +S + N V+ +A + + R T++
Sbjct: 679 ----DAEARR----NSQQLMSIYNLVQRLAQSAVEREETWL------------------- 711
Query: 1123 SFNDKVFLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLV 1182
DK +SE+ ++ + Y K+ ++A + +A +Y +
Sbjct: 712 ---DKWLISEVAHVLERAREAYEKVRLRQAAVELLYNAEAVFSQYLSMVDKPS----KSA 764
Query: 1183 LRFVEVQALLLCPVCPHVAEHVYQLLGKD 1211
+ + + L P+ PH AE ++Q+LG +
Sbjct: 765 VEAAKAWVVALEPIVPHFAEELWQILGGE 793
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 100/167 (59%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVV-ALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G E VV L DQW+++YGE WK A Q + M E + F A+++WL + A
Sbjct: 443 VYCRCGTEIVVKVLEDQWFINYGERGWKQLARQLVEEMAIIPQEAKAQFLATIDWLDKRA 502
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+RT GLGT LPW + W+IESLSDSTIYMA+YTV ++ AL ++ E LT
Sbjct: 503 CARTRGLGTPLPWSQGWVIESLSDSTIYMAFYTVIKKIR----------ALGLRPEQLTE 552
Query: 555 EVWDYVFF---KSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E WDYVF +A + V A L+ +RREF YWYP+D R SGK
Sbjct: 553 EFWDYVFLGQGSAAEVAKRIGVDPAALEEIRREFDYWYPLDSRNSGK 599
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 113/287 (39%), Gaps = 58/287 (20%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
KFF T +PY NG +H+GH + + RF R G VLFP FH TG PI A+
Sbjct: 35 KFFITAAYPYPNGTIHIGHGRTYLVADVMARFRRHLGYNVLFPMAFHYTGTPILTIAE-- 92
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
V AG + + G
Sbjct: 93 ------------------------------------------VIAAGDKAVIEEYKEIYG 110
Query: 209 LEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRL 268
+ DD+I+K D + +F + + + G+ +DW R F T D P + F++WQF +L
Sbjct: 111 VSDDDIKKMGDPLYLAQYFHRRSKEAMIKFGLGIDWSREFTTID--PEYQRFIQWQFEKL 168
Query: 269 RDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDSK 328
R R I G+ + PR P HD + ++TLI +D +
Sbjct: 169 RKRGLIVRGRHPVGWCPRHQMPVGAHDTKDDKEPEIGQWTLIYF------------VDGE 216
Query: 329 PVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFLVAATLR 375
+ ATLRPET+ G TN W+ PD Y+ K V A R
Sbjct: 217 GLVYPTATLRPETVPGVTNIWINPDAEYVVAEFEGRKMVLSKDAAYR 263
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 43/232 (18%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDLI NHLTFFI+ H AI+ E WPR I ANG +L KMSKS+ N L L +AV
Sbjct: 598 GKDLIPNHLTFFIFNHVAIFPRE--KWPRQIVANGWVLREGEKMSKSKRNVLPLDKAVAL 655
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ D +R LA + + +D +F DA ++ S M + N V+ +A
Sbjct: 656 YGPDPLRATLAIAAEVEQDLDF----RDAEARRNSQQLMSIY-----------NLVQRLA 700
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
+ + R ++++ DK +SE+ ++ + Y K+ ++A
Sbjct: 701 QSAVER----------------------EETWLDKWLISEVAHVLERAREAYEKVRLRQA 738
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ +A +Y + + + + L P+ PH AE +
Sbjct: 739 AVELLYNAEAVFSQYLSMVDKPS----KSAVEAAKAWVVALEPIVPHFAEEL 786
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
+ T LPW + W+IESLSDSTIYMA+YTV ++ R E
Sbjct: 509 LGTPLPWSQGWVIESLSDSTIYMAFYTVIKKIRALGLRPEQ 549
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 1500 LLLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGP 1533
+ L P+ PH AE ++Q+LG +G A WP+ P
Sbjct: 773 VALEPIVPHFAEELWQILGGEGFAATAPWPKLSP 806
Score = 35.0 bits (79), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 689 KLQEAKELVYLKGFYDGIMLVGEFKGKKVQEVKKLLQKKIDIIGVALKAPVTSHSV-IYT 747
K+ +K+ Y F + ++ E +G+ + +G + PVT V +Y
Sbjct: 253 KMVLSKDAAYRLSFQGNVKVIREARGR-------------EFVGRRVLNPVTGEWVPVYE 299
Query: 748 LPMLSIREDKGTGIVTSVPSDSPDDYAALVDL 779
+ + GTG+V SVP+ +P DYAAL D+
Sbjct: 300 AKFVDPK--VGTGVVMSVPAHAPYDYAALRDM 329
>sp|A6USJ5|SYL_METVS Leucine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=leuS PE=3 SV=1
Length = 952
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 244/564 (43%), Gaps = 137/564 (24%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVG--EFKGKK 716
+ +I++ YG A + EK+ I++Q D+ L+EA +Y F+ G + E+KG
Sbjct: 362 ISLIEIEGYGKYPAKEIVEKMNIKNQKDEALLEEATSKIYKDEFHKGKLNENCPEYKGTS 421
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTL--PMLSIREDKGTGIVTSVPSDSPDDYA 774
V+++K+ L K G++ ++Y P + R
Sbjct: 422 VKDIKEKLIKDYMNFGIS--------EIMYEFSEPKVVCR-------------------- 453
Query: 775 ALVDLKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRR 833
E C++ QW++ Y + WK A +C+ +M + +R
Sbjct: 454 -----------------CGEKCIIKTVKGQWFITYSDENWKRLAHECIDSMEFAPENLRH 496
Query: 834 NFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 893
F ++W+ + AC+R GLGTKLP+D W+IESLSDSTIYMAYYT+A + G
Sbjct: 497 EFHNKIDWMKDKACARRKGLGTKLPFDTNWMIESLSDSTIYMAYYTIARFINAG------ 550
Query: 894 GNALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDI---MRREFQYWYPVDLRCSGK 950
I LT E+++YVF V + ++I MR+EF Y+YP+D RCS
Sbjct: 551 -----INENQLTSELFEYVFSGNGNLAEISNVSEVSIEIIEEMRKEFLYFYPLDWRCS-- 603
Query: 951 DLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLI 1010
AKDLI NHL+F I+
Sbjct: 604 ---------------------------------------AKDLIPNHLSFMIF------- 617
Query: 1011 QNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADG 1070
NH+ F + E WPRGI NG++ + K+SKS+G L + E + F AD
Sbjct: 618 -NHVALF----------KKEHWPRGIEINGYVTIEGKKLSKSKGPVLPVLEVSETFGADV 666
Query: 1071 MRLCLADSGDSVEDAN--FVE-SMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDK 1127
R + + +DA+ F E A +++LY +L T+ + + S DK
Sbjct: 667 ARFYITTCAELPQDADVKFKEMEKARDNLIKLYELA-----VLVTKEGI-IEKELSIIDK 720
Query: 1128 VFLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVE 1187
L + + I E Y + ++ + F+EL Y+ GG + ++ VE
Sbjct: 721 WLLHKTHSSINFAEKAYEEFHLRK-IGLMFYELINDLRWYKR----RGGDNNGVLKEVVE 775
Query: 1188 VQALLLCPVCPHVAEHVYQLLGKD 1211
+ LL PV PH+ E +++LLG +
Sbjct: 776 IWTKLLSPVTPHLCEEIWELLGHN 799
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 88 DKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADK 147
+KFF + FPY+NG LH GH + + E R+ R+K K VL+ FGFH TG PI A++
Sbjct: 39 EKFFISAAFPYLNGVLHAGHLRTFTIPETIARYQRMKNKNVLWTFGFHVTGTPILGLANQ 98
Query: 148 LKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSL 207
+K + E W
Sbjct: 99 IKEKKEDI--------------------------------------------IWAYTNLH 114
Query: 208 GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMR 267
+ DE+ K ++ F A + +G +DWRR F T D F F+ WQF +
Sbjct: 115 NIPMDELLKLDTPEAIVECFSKKATDAFKKMGFSLDWRRNFKTDDK--VFSKFIEWQFYK 172
Query: 268 LRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDS 327
L+D IK G + P+ P DHD GE EY LIK D
Sbjct: 173 LKDLGLIKKGSHPVRYCPKCENPVEDHDLLHGEESTTVEYNLIKFT---------STFDE 223
Query: 328 KPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDS 364
K V + ATLRPET++G TNAWV PD Y+ D
Sbjct: 224 KDVIIPMATLRPETVFGVTNAWVNPDEIYVLAEVYDE 260
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 15/168 (8%)
Query: 435 QVCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEY 493
+V R G++C++ QW++ Y + WK A +C+ +M + +R F ++W+ +
Sbjct: 449 KVVCRCGEKCIIKTVKGQWFITYSDENWKRLAHECIDSMEFAPENLRHEFHNKIDWMKDK 508
Query: 494 ACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLT 553
AC+R GLGTKLP+D W+IESLSDSTIYMAYYT+A + G I LT
Sbjct: 509 ACARRKGLGTKLPFDTNWMIESLSDSTIYMAYYTIARFINAG-----------INENQLT 557
Query: 554 PEVWDYVFFKSAPFPPKCRVPKAKLDI---MRREFQYWYPVDLRCSGK 598
E+++YVF + V + ++I MR+EF Y+YP+D RCS K
Sbjct: 558 SELFEYVFSGNGNLAEISNVSEVSIEIIEEMRKEFLYFYPLDWRCSAK 605
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
KDLI NHL+F I+ H A++ + E WPRGI NG++ + K+SKS+G L + E +
Sbjct: 604 AKDLIPNHLSFMIFNHVALF--KKEHWPRGIEINGYVTIEGKKLSKSKGPVLPVLEVSET 661
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVE-SM 1327
F AD R + + +DA D F E
Sbjct: 662 FGADVARFYITTCAELPQDA-------------------------------DVKFKEMEK 690
Query: 1328 ADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKE 1387
A +++LY +L T+ + + S DK L + + I E Y + ++
Sbjct: 691 ARDNLIKLYELA-----VLVTKEGI-IEKELSIIDKWLLHKTHSSINFAEKAYEEFHLRK 744
Query: 1388 ALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ F+EL Y+ GG + ++ VE+ LL PV PH+ E +
Sbjct: 745 -IGLMFYELINDLRWYKR----RGGDNNGVLKEVVEIWTKLLSPVTPHLCEEI 792
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGG 633
+ TKLP+D W+IESLSDSTIYMAYYT+A + G
Sbjct: 516 LGTKLPFDTNWMIESLSDSTIYMAYYTIARFINAG 550
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 703 YDGIMLVGEFKGKKVQEVKKLLQ-----KKIDIIGVALKAPVTSHSVIYTLPMLSIREDK 757
Y+G+ +VG+ K++E K ++ K ++IG+ +K PVT+ V P + +
Sbjct: 273 YNGLWIVGKECADKLKEQDKNIKILKEFKGSELIGLKIKNPVTNLKVP-IFPAEFVEMNI 331
Query: 758 GTGIVTSVPSDSPDDYAALVDLKK 781
GTG V SVP+ +P DY AL DL+K
Sbjct: 332 GTGCVMSVPAHAPYDYVALRDLEK 355
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 1484 GGMHRTLVLRFVEVQALLLCPVCPHVAEHVYQLLGKKGSIVKARWP 1529
GG + ++ VE+ LL PV PH+ E +++LLG G I K +P
Sbjct: 763 GGDNNGVLKEVVEIWTKLLSPVTPHLCEEIWELLGHNGFISKEIFP 808
>sp|O30250|SYL_ARCFU Leucine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558 /
VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=leuS PE=3
SV=1
Length = 932
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 235/556 (42%), Gaps = 131/556 (23%)
Query: 658 PVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIML--VGEFKGK 715
P+ +I+ G + A + +L ++SQ DK+ L +A + +Y K ++ GIML + G
Sbjct: 347 PIVLIKTDIEG-VPAEKLIRELGVKSQKDKELLDKATKTLYKKEYHTGIMLDNTMNYAGM 405
Query: 716 KVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAA 775
KV E K+ + + + +G+ V Y + GT
Sbjct: 406 KVSEAKERVHEDLVKLGLG--------DVFYEFSEKPVICRCGTK--------------- 442
Query: 776 LVDLKKKPPFREKYHVTDEMCVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRN 834
CVV + DQW+L+Y WK L M D +
Sbjct: 443 --------------------CVVKVVRDQWFLNYSNREWKEKVLNHLEKMRIIPDYYKEE 482
Query: 835 FGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENG 894
F + WL + AC+R GLGT++PWD++WLIESLSDSTIYMAYY +A + G
Sbjct: 483 FRNKIEWLRDKACARRKGLGTRIPWDKEWLIESLSDSTIYMAYYILAKYINAGL------ 536
Query: 895 NALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIM---RREFQYWYPVDLRCSGKD 951
+KAE++TPE DYV K ++++ R +F+YWYPVDL
Sbjct: 537 ----LKAENMTPEFLDYVLLGKGEVGKVAEASKLSVELIQQIRDDFEYWYPVDL------ 586
Query: 952 LIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQ 1011
R++G DL+
Sbjct: 587 ----------------------------RSSG-----------------------KDLVA 595
Query: 1012 NHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGM 1071
NHL F+++ H AI+ P+ WPR I NG++ L KMSKS+G LT+ AV+++ AD
Sbjct: 596 NHLLFYLFHHVAIFP--PDKWPRAIAVNGYVSLEGKKMSKSKGPLLTMKRAVQQYGADVT 653
Query: 1072 RLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLS 1131
RL + + + DA++ + L F VKE + L+ + + D+ +S
Sbjct: 654 RLYILHAAEYDSDADWKSREVEGLANHLRRFYNLVKE-----NYLKEVGELTTLDRWLVS 708
Query: 1132 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1191
M IKE + + + A+ FFEL Y GG + ++L +
Sbjct: 709 RMQRAIKEVREAMDNLQTRRAVNAAFFELMNDVRWY----LRRGGENLAIIL---DDWIK 761
Query: 1192 LLCPVCPHVAEHVYQL 1207
LL P PH+ E ++ L
Sbjct: 762 LLAPFAPHICEELWHL 777
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 127/277 (45%), Gaps = 59/277 (21%)
Query: 84 SSPDDK--FFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPI 141
S P++K FF T P+PY+NG LH GHT + + + R+ R+KG VLFP GFH TG PI
Sbjct: 23 SDPNEKEKFFLTIPYPYLNGNLHAGHTRTFTIGDAFARYMRMKGYNVLFPLGFHVTGTPI 82
Query: 142 KACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQW 201
A+ + + D+ I+ +K
Sbjct: 83 IGLAELIAKR-----------------------DERTIEVYTK----------------- 102
Query: 202 QIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFV 261
+ LED + + +++F A+Q L+SIG +DWRR F TTD + F+
Sbjct: 103 --YHDVPLED--LLQLTTPEKIVEYFSREALQALKSIGYSIDWRRVFTTTDEE--YQRFI 156
Query: 262 RWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAK 321
WQ+ +L++ I G + P D P DHD +GE E+T+IK R
Sbjct: 157 EWQYWKLKELGLIVKGTHPVRYCPHDQNPVEDHDLLAGEEATIVEFTVIKFR-------- 208
Query: 322 LCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIA 358
L+ + ATLRPET++G TN WV+P IA
Sbjct: 209 ---LEDGDLIFPCATLRPETVFGVTNIWVKPTTYVIA 242
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 93/167 (55%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G +CVV + DQW+L+Y WK L M D + F + WL + A
Sbjct: 435 VICRCGTKCVVKVVRDQWFLNYSNREWKEKVLNHLEKMRIIPDYYKEEFRNKIEWLRDKA 494
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+R GLGT++PWD++WLIESLSDSTIYMAYY +A + G +KAE++TP
Sbjct: 495 CARRKGLGTRIPWDKEWLIESLSDSTIYMAYYILAKYINAGL----------LKAENMTP 544
Query: 555 EVWDYVFFKSAPFPPKCRVPKAKLDI---MRREFQYWYPVDLRCSGK 598
E DYV K +++ +R +F+YWYPVDLR SGK
Sbjct: 545 EFLDYVLLGKGEVGKVAEASKLSVELIQQIRDDFEYWYPVDLRSSGK 591
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 47/232 (20%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDL+ NHL F+++ H AI+ P+ WPR I NG++ L KMSKS+G LT+ AV++
Sbjct: 590 GKDLVANHLLFYLFHHVAIFP--PDKWPRAIAVNGYVSLEGKKMSKSKGPLLTMKRAVQQ 647
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ AD RL + + + DA++ + VE +A
Sbjct: 648 YGADVTRLYILHAAEYDSDADW-----------------------------KSREVEGLA 678
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
+ + R Y ++ ++ L+ + + D+ +S M IKE + + + A
Sbjct: 679 N-HLRRFYNLVK--------ENYLKEVGELTTLDRWLVSRMQRAIKEVREAMDNLQTRRA 729
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ FFEL Y GG + ++L + LL P PH+ E +
Sbjct: 730 VNAAFFELMNDVRWY----LRRGGENLAIIL---DDWIKLLAPFAPHICEEL 774
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 592 DLRCSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
D C+ + + T++PWD++WLIESLSDSTIYMAYY +A + G + EN
Sbjct: 492 DKACARRKGLGTRIPWDKEWLIESLSDSTIYMAYYILAKYINAGLLKAEN 541
Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 748 LPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREKYHV 791
LP + D TG+V SVP+ +P D AA+ DLK+ KY +
Sbjct: 294 LPAEFVDTDNATGVVMSVPAHAPFDLAAIEDLKRDEETLAKYGI 337
>sp|P61760|SYL_NANEQ Leucine--tRNA ligase OS=Nanoarchaeum equitans (strain Kin4-M) GN=leuS
PE=3 SV=1
Length = 977
Score = 190 bits (483), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 250/554 (45%), Gaps = 137/554 (24%)
Query: 660 PIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIML--VGEFKGKKV 717
P+++V + + A + E + I SQ ++DKL++A + +Y K FY G++ +F+G V
Sbjct: 415 PVVKVEGFSEMPAKDIVESMNITSQEERDKLEKATQRLYSKEFYHGVLTEHAQQFQGLPV 474
Query: 718 QEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALV 777
+E K + + + G + YTLP+
Sbjct: 475 KEAKMKIAEYLMENGYGY--------IYYTLPVR-------------------------- 500
Query: 778 DLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGA 837
F+ +Y +++ V + QW++ Y + WK A + + NM Y +V+
Sbjct: 501 -------FKSRY--GNKVVVKLVKGQWFIKYSDKQWKELAHKAVENMKFYPPQVKELIKE 551
Query: 838 SLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNAL 897
++W ++A + LGT LPWD +W+IESLSDSTIY AYYT+AH+LQ +
Sbjct: 552 KIDWYDDWAFTHQKELGTALPWDPKWVIESLSDSTIYTAYYTIAHILQ-------HPEKY 604
Query: 898 NIKAEDLTPEVWDYVFF-KAAP--FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQ 954
NI + LT +V+DYVF K P K + + L MR +F+YWY
Sbjct: 605 NIDWDKLTIDVFDYVFLGKGDPKEIAKKTGISEEILKEMRNQFEYWY------------- 651
Query: 955 NHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHL 1014
P IR + DLI NHL
Sbjct: 652 ---------------------PVDIRFSAQ-----------------------DLIANHL 667
Query: 1015 TFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLC 1074
F+I+ H AI+ + WPRGI +G + +N KMSKS+GNF+T+ EA++++ D +RL
Sbjct: 668 VFYIFHHVAIFPES--KWPRGIAVSGFVTVNGEKMSKSKGNFITIREAIQRYGRDAVRLA 725
Query: 1075 LADSG-----DSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFN-DKV 1128
A +G D D F+E + I R+ ++++ + +D + DK
Sbjct: 726 AAYAGNAELVDQNIDLEFMEKAKNEIIPRIESYLD-----------MEGYDRDENSLDKW 774
Query: 1129 FLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVE- 1187
++ + L K+ E++Y + ++ + FF+L+ + YR L + H+ + F +
Sbjct: 775 IVNRIRLYFKKLEEYYENIRPRDVINE-FFKLENDFNFYRALVLEKP--HKRAIEYFKKA 831
Query: 1188 VQALLLCPVCPHVA 1201
V+A L P+ PHV
Sbjct: 832 VKA--LWPIIPHVV 843
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 132/283 (46%), Gaps = 63/283 (22%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
KFF T FPY+NG LHLGH + K E + R+ +++G VLFP GFH TG PI A A K+
Sbjct: 3 KFFVTAAFPYVNGYLHLGHLVTYIKAEITARYKKMRGYDVLFPMGFHATGAPIYAAAYKV 62
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
S G P Q + ++ +G
Sbjct: 63 -----SIGDPKQI----------------------------------------ETLKKMG 77
Query: 209 LEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRL 268
++D I KF D ++W+++F A +DL +G ++W R+F T + P F FV WQ+ RL
Sbjct: 78 IKD--IEKFKDPAYWVEYFSKAAKEDLSKLGFMIEWERSFTTVFNKP-FHKFVEWQYHRL 134
Query: 269 RDRHKIKYGKRYTVFSPRDNQPCMDHDRASG-EGVGPQEYTLIKMRLVKPYPAKLCCLDS 327
R++ I G V+ P+ N DHDR G+ P E +IK Y L
Sbjct: 135 REKGYIYRGAHPIVWDPKVNMVIGDHDRPDDYAGIRPIEGVIIKF-----YSKDLDA--- 186
Query: 328 KPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFLV 370
+L A TLRPET++G N WV P+ Y+ K VF V
Sbjct: 187 ---YLPAFTLRPETVFGVVNIWVNPETEYVLAKV---KKVFYV 223
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 11/164 (6%)
Query: 439 RSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYACSR 497
R G++ VV L QW++ Y + WK A + + NM Y +V+ ++W ++A +
Sbjct: 504 RYGNKVVVKLVKGQWFIKYSDKQWKELAHKAVENMKFYPPQVKELIKEKIDWYDDWAFTH 563
Query: 498 TYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVW 557
LGT LPWD +W+IESLSDSTIY AYYT+AH+LQ + NI + LT +V+
Sbjct: 564 QKELGTALPWDPKWVIESLSDSTIYTAYYTIAHILQ-------HPEKYNIDWDKLTIDVF 616
Query: 558 DYVFF-KSAP--FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
DYVF K P K + + L MR +F+YWYPVD+R S +
Sbjct: 617 DYVFLGKGDPKEIAKKTGISEEILKEMRNQFEYWYPVDIRFSAQ 660
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 48/231 (20%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
+DLI NHL F+I+ H AI+ + WPRGI +G + +N KMSKS+GNF+T+ EA+++
Sbjct: 659 AQDLIANHLVFYIFHHVAIFPES--KWPRGIAVSGFVTVNGEKMSKSKGNFITIREAIQR 716
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ D +RL A +G+ A+ D D F+E
Sbjct: 717 YGRDAVRLAAAYAGN----------------------------AELVDQNIDLEFMEKAK 748
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFN-DKVFLSEMNLKIKETEDHYTKMLFKE 1387
+ I R+ ++++ + +D + DK ++ + L K+ E++Y + ++
Sbjct: 749 NEIIPRIESYLD-----------MEGYDRDENSLDKWIVNRIRLYFKKLEEYYENIRPRD 797
Query: 1388 ALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVE-VQALLLCPVCPHVA 1437
+ FF+L+ + YR L + H+ + F + V+A L P+ PHV
Sbjct: 798 VINE-FFKLENDFNFYRALVLEKP--HKRAIEYFKKAVKA--LWPIIPHVV 843
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 6/65 (9%)
Query: 567 FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKVSTKLPWDEQWLIESLSDSTIYMAYYTV 626
+PP+ + ++++ + ++ ++ T LPWD +W+IESLSDSTIY AYYT+
Sbjct: 541 YPPQVK------ELIKEKIDWYDDWAFTHQKELGTALPWDPKWVIESLSDSTIYTAYYTI 594
Query: 627 AHLLQ 631
AH+LQ
Sbjct: 595 AHILQ 599
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 727 KID-IIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKK 781
KID +I + PVT ++ LP + + GTGIV SVPS +P DY L+DL K
Sbjct: 345 KIDKLIKTLAENPVTK-ELVPVLPAKFVDPEVGTGIVMSVPSHAPYDYVGLLDLIK 399
>sp|Q6LZD2|SYL_METMP Leucine--tRNA ligase OS=Methanococcus maripaludis (strain S2 / LL)
GN=leuS PE=3 SV=1
Length = 955
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 173/337 (51%), Gaps = 58/337 (17%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+P+I++ Y A + EKL I+ QND++ L++A +Y F+ G
Sbjct: 365 IPLIEIEGYDKYPAKEIVEKLGIKDQNDEELLEQATSKIYKDEFHKG------------- 411
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
KL + + G+++K I+E + S ++ +++
Sbjct: 412 ---KLNENCGEYTGISVK---------------DIKEKLTKDYINSNIAEIMYEFS---- 449
Query: 779 LKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGA 837
++K R E C++ QW+++Y + WK A +C+ NMN + +R+ F
Sbjct: 450 -EQKVVCR-----CGEKCIIKTVKGQWFINYSDENWKKLAHECIDNMNFAPEGIRQEFHN 503
Query: 838 SLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNAL 897
++W+ + AC+R GLGT LP+DE W+IESLSDSTIYMAYYT+A + G
Sbjct: 504 KVDWMKDKACARKRGLGTILPFDENWIIESLSDSTIYMAYYTIARFINEG---------- 553
Query: 898 NIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQ 954
+ E L PE++DYV+ A ++ ++ MR+EF Y+YP+D RCS KDLI
Sbjct: 554 -LTPEQLIPELFDYVYLGNGNAEEIAKNSKIQAETIEEMRKEFLYYYPLDWRCSAKDLIP 612
Query: 955 NHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAK 991
NHLTF I+ H A++G E WPRGI NG++ + K
Sbjct: 613 NHLTFMIFNHVALFGR--EHWPRGIEINGYVTIEGKK 647
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 100/168 (59%), Gaps = 15/168 (8%)
Query: 435 QVCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEY 493
+V R G++C++ QW+++Y + WK A +C+ NMN + +R+ F ++W+ +
Sbjct: 452 KVVCRCGEKCIIKTVKGQWFINYSDENWKKLAHECIDNMNFAPEGIRQEFHNKVDWMKDK 511
Query: 494 ACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLT 553
AC+R GLGT LP+DE W+IESLSDSTIYMAYYT+A + G + E L
Sbjct: 512 ACARKRGLGTILPFDENWIIESLSDSTIYMAYYTIARFINEG-----------LTPEQLI 560
Query: 554 PEVWDYVFF---KSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
PE++DYV+ + ++ ++ MR+EF Y+YP+D RCS K
Sbjct: 561 PELFDYVYLGNGNAEEIAKNSKIQAETIEEMRKEFLYYYPLDWRCSAK 608
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 128/299 (42%), Gaps = 56/299 (18%)
Query: 66 LSKFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKG 125
+ K+++K E + +A S DKFF T FPY+NG LH GH + + E R+ R+K
Sbjct: 21 MDKWQKKWTEAKIFEAEHDS-RDKFFITAAFPYLNGVLHAGHLRTFTIPETIARYQRMKN 79
Query: 126 KRVLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKG 185
K VL+ FGFH TG PI A+++K E
Sbjct: 80 KNVLWTFGFHVTGTPILGLANQIKERKEDI------------------------------ 109
Query: 186 KKSKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWR 245
W + DE+ K ++ F A + + +G +DWR
Sbjct: 110 --------------IWAYNNLHNIPMDELLKLNTPEAIVECFSKKATEAFKRMGFSLDWR 155
Query: 246 RTFITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQ 305
R F T D F F+ WQF +L++ I G + P+ P DHD GE
Sbjct: 156 RNFKTDDK--VFSKFIEWQFYKLKEMGHITKGSHPVRYCPKCENPVEDHDLLHGEESTTV 213
Query: 306 EYTLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDS 364
EY+LIK + +K D K + + ATLRPET++G TNAWV P+ Y+ D
Sbjct: 214 EYSLIK------FTSKF---DGKEIIMPMATLRPETVFGVTNAWVNPNEIYVMAEVHDE 263
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
KDLI NHLTF I+ H A++G E WPRGI NG++ + K+SKS+G L ++E +
Sbjct: 607 AKDLIPNHLTFMIFNHVALFGRE--HWPRGIEINGYVTIEGKKLSKSKGPVLPVSEVAEN 664
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVE-SM 1327
F AD R + + +DA D F E
Sbjct: 665 FGADVARFYITTCAELPQDA-------------------------------DVKFKEMEK 693
Query: 1328 ADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKE 1387
A +++LY V E + + L S DK L + I E Y + ++
Sbjct: 694 ARDNLIKLYDLAVSVMEEESAEKEL------SLIDKWLLHKTYSSINSAETAYEEFQLRK 747
Query: 1388 ALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ F+EL Y+ GG + +++ VE+ LL PV PH+ E +
Sbjct: 748 -IGLMFYELINDLRWYKR----RGGENNSVLKEVVEIWTKLLSPVTPHLCEEI 795
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 581 MRREFQY---WYPVDLRCSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGG 633
+R+EF W D C+ K + T LP+DE W+IESLSDSTIYMAYYT+A + G
Sbjct: 497 IRQEFHNKVDWMK-DKACARKRGLGTILPFDENWIIESLSDSTIYMAYYTIARFINEG 553
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 703 YDGIMLVGEFKGKKVQEVKKLLQ-----KKIDIIGVALKAPVTSHSVIYTLPMLSIREDK 757
Y+GI ++G+ K++E + ++ K +++G+ +K PVT V LP +
Sbjct: 276 YNGIWIIGKECADKLKEQDRKIEILKEIKGSELLGLKIKNPVTKKEVP-LLPADFVEMGI 334
Query: 758 GTGIVTSVPSDSPDDYAALVDLKK 781
GTG V SVP+ +P DY AL DL K
Sbjct: 335 GTGCVMSVPAHAPYDYVALRDLGK 358
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 1484 GGMHRTLVLRFVEVQALLLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGP--IDDILVRS 1541
GG + +++ VE+ LL PV PH+ E +++ LG G I + +P P I++ L
Sbjct: 766 GGENNSVLKEVVEIWTKLLSPVTPHLCEEIWEKLGYAGFISQEMYPVSKPELINEDLELG 825
Query: 1542 SSYLMEAAHAFR 1553
++ A R
Sbjct: 826 EEFIKSAMEDIR 837
>sp|A4FYA3|SYL_METM5 Leucine--tRNA ligase OS=Methanococcus maripaludis (strain C5 / ATCC
BAA-1333) GN=leuS PE=3 SV=1
Length = 955
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 171/337 (50%), Gaps = 58/337 (17%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQ 718
+P+I++ Y A + EKL ++ QND + L++A +Y F+ G
Sbjct: 365 IPLIEIEGYDKYPAKEIVEKLGVKDQNDDELLEQATSKIYKDEFHKG------------- 411
Query: 719 EVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
KL + + G+++K I+E + S ++ +++
Sbjct: 412 ---KLNENCGEYAGISVK---------------DIKEKLTKDYLNSNIAEIMYEFS---- 449
Query: 779 LKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGA 837
++K R E C++ QW+++Y + WK A +C+ NMN + +R+ F
Sbjct: 450 -EQKVVCR-----CGEKCIIKTVKGQWFINYSDENWKKLAHECIDNMNFAPENIRQEFHN 503
Query: 838 SLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNAL 897
++W+ + AC+R GLGT LP+DE W+IESLSDSTIYMAYYT+A + G
Sbjct: 504 KVDWMKDKACARKKGLGTILPFDENWIIESLSDSTIYMAYYTIARFINEG---------- 553
Query: 898 NIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQ 954
+ E L PE+++YV+ + K ++ MR+EF Y+YP+D RCS KDLI
Sbjct: 554 -LTPEQLIPELFEYVYLGNGNVEEITKNSNISKETIEEMRKEFLYYYPLDWRCSAKDLIP 612
Query: 955 NHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAK 991
NHLTF I+ H A++G E WPRGI NG++ + K
Sbjct: 613 NHLTFMIFNHVALFGR--EHWPRGIEINGYVTIEGKK 647
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 100/168 (59%), Gaps = 15/168 (8%)
Query: 435 QVCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEY 493
+V R G++C++ QW+++Y + WK A +C+ NMN + +R+ F ++W+ +
Sbjct: 452 KVVCRCGEKCIIKTVKGQWFINYSDENWKKLAHECIDNMNFAPENIRQEFHNKVDWMKDK 511
Query: 494 ACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLT 553
AC+R GLGT LP+DE W+IESLSDSTIYMAYYT+A + G + E L
Sbjct: 512 ACARKKGLGTILPFDENWIIESLSDSTIYMAYYTIARFINEG-----------LTPEQLI 560
Query: 554 PEVWDYVFFKSA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
PE+++YV+ + + K ++ MR+EF Y+YP+D RCS K
Sbjct: 561 PELFEYVYLGNGNVEEITKNSNISKETIEEMRKEFLYYYPLDWRCSAK 608
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 117/277 (42%), Gaps = 55/277 (19%)
Query: 88 DKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADK 147
DKFF T FPY+NG LH GH + + E R+ R+K K VL+ FGFH TG PI A++
Sbjct: 42 DKFFITAAFPYLNGVLHAGHLRTFTIPETIARYQRMKNKNVLWTFGFHVTGTPILGLANQ 101
Query: 148 LKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSL 207
+K D + +I W
Sbjct: 102 IK-----------------------DRKEDII---------------------WAYNNLH 117
Query: 208 GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMR 267
+ DE+ K ++ F A + + +G +DWRR F T D F F+ WQF +
Sbjct: 118 NIPMDELLKLKTPEAIVECFSKKATEAFKRMGFSLDWRRNFKTDDK--VFSKFIEWQFYK 175
Query: 268 LRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDS 327
L++ I G + P+ P DHD GE EY+LIK D
Sbjct: 176 LKEMGHITKGSHPVRYCPKCENPVEDHDLLHGEESTTVEYSLIKFT---------SEFDG 226
Query: 328 KPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDS 364
K + + ATLRPET++G TNAWV P+ Y+ D
Sbjct: 227 KEIIMPMATLRPETLFGVTNAWVNPNEIYVMAKVHDE 263
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 97/233 (41%), Gaps = 45/233 (19%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
KDLI NHLTF I+ H A++G E WPRGI NG++ + K+SKS+G L ++E +
Sbjct: 607 AKDLIPNHLTFMIFNHVALFGRE--HWPRGIEINGYVTIEGKKLSKSKGPVLPVSEVAEN 664
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVE-SM 1327
F AD R + + +DA D F E
Sbjct: 665 FGADVARFYITTCAELPQDA-------------------------------DVKFKEMEK 693
Query: 1328 ADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKE 1387
A +++LY V E T+ L S DK L + I E Y + ++
Sbjct: 694 ARDNLIKLYELAVSVMEEEKTEKEL------SLIDKWLLHKTYSSINGAETAYEEFQLRK 747
Query: 1388 ALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ F+EL Y+ GG + ++ VE+ LL PV PH+ E +
Sbjct: 748 -IGLMFYELINDLRWYKR----RGGENNNVLKEVVEIWTKLLSPVTPHLCEEI 795
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 581 MRREFQY---WYPVDLRCSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGG 633
+R+EF W D C+ K + T LP+DE W+IESLSDSTIYMAYYT+A + G
Sbjct: 497 IRQEFHNKVDWMK-DKACARKKGLGTILPFDENWIIESLSDSTIYMAYYTIARFINEG 553
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 703 YDGIMLVGEFKGKKVQEVKKLLQ-----KKIDIIGVALKAPVTSHSVIYTLPMLSIREDK 757
Y+GI +VG+ K++E + ++ K +++G+ +K PVT V LP +
Sbjct: 276 YNGIWIVGKECADKLKEQDRKIEILKEIKGNELLGLKIKNPVTKKEVP-LLPADFVEMGI 334
Query: 758 GTGIVTSVPSDSPDDYAALVDLKK 781
GTG V SVP+ +P DY AL DL K
Sbjct: 335 GTGWVMSVPAHAPYDYVALRDLGK 358
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 1484 GGMHRTLVLRFVEVQALLLCPVCPHVAEHVYQLLGKKGSIVKARWPE 1530
GG + ++ VE+ LL PV PH+ E +++ LG G I + +PE
Sbjct: 766 GGENNNVLKEVVEIWTKLLSPVTPHLCEEIWEKLGYAGFISQELYPE 812
>sp|Q4J8J7|SYL2_SULAC Leucine--tRNA ligase 2 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=leuS2 PE=3 SV=2
Length = 942
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 241/561 (42%), Gaps = 114/561 (20%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIML--VGEFKGKK 716
+ +I+V G A + EK Q+ ND KL E VY + G+M+ K +
Sbjct: 328 ISVIRVEGMGETLAKDLVEKSNPQNDNDLKKLTEQ---VYRIEYNKGVMIDITKLVKPEY 384
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V+E+K L V L P + + KG G +
Sbjct: 385 VEELKPL---------VNLPVPAARQKITEFI------TQKGLG-------------RKI 416
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFG 836
++ +P + +E+ V L DQW+LDYG WK A + + ++ E++++F
Sbjct: 417 YEIMNRPVY---CRCGNEVVVKILKDQWFLDYGNQEWKDLARKSIESIRFIPPEIKKDFE 473
Query: 837 ASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNA 896
++WL + AC+RT GLGT LPWD++W+IESLSDSTIYMA+YT+AH L+
Sbjct: 474 FVVDWLQKRACARTRGLGTPLPWDKKWIIESLSDSTIYMAFYTIAHRLKEH--------- 524
Query: 897 LNIKAEDLTPEVWDYVFF---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLI 953
+K LT E W+Y+ +P + MR EF YWYP+D+R SGKDL+
Sbjct: 525 -KLKPSQLTYEFWEYIMLGNGNPDEISKISGIPVEVIKAMRDEFLYWYPLDVRHSGKDLV 583
Query: 954 QNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNH 1013
NHL+FFI+ H AI+ ++WP+GI NG +L + K +
Sbjct: 584 PNHLSFFIFNHAAIFPH--QLWPKGIAVNGFVLYDGKK------------------MSKS 623
Query: 1014 LTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRL 1073
L + + AI P++ + N + G +
Sbjct: 624 LRNIVPLRKAIRMYSPDVIRIALTTNADI---------------------------GSDV 656
Query: 1074 CLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEM 1133
+DS + +S+ D + Y +E +KE G + F +K S+
Sbjct: 657 NFSDS--------YAKSIIDT-LKNYYDLLEKLKEF--------KGEDEGFPEKWLKSKF 699
Query: 1134 NLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGM-HRTLVLRFVEVQALL 1192
+ + + + + + + ++Y EL +EG + L+ + +++ L
Sbjct: 700 YQMVINVTQYMDSLDLRSSSNEILYNFSSYINEYFELVRSEGREPNGKLLSQILQIWIKL 759
Query: 1193 LCPVCPHVAEHVYQLLGKDLI 1213
L P PH AE ++ +GK+ +
Sbjct: 760 LSPFAPHFAEELWHKIGKNTL 780
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 99/167 (59%), Gaps = 14/167 (8%)
Query: 436 VCIRSGDECVVA-LCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G+E VV L DQW+LDYG WK A + + ++ E++++F ++WL + A
Sbjct: 424 VYCRCGNEVVVKILKDQWFLDYGNQEWKDLARKSIESIRFIPPEIKKDFEFVVDWLQKRA 483
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
C+RT GLGT LPWD++W+IESLSDSTIYMA+YT+AH L+ +K LT
Sbjct: 484 CARTRGLGTPLPWDKKWIIESLSDSTIYMAFYTIAHRLKEH----------KLKPSQLTY 533
Query: 555 EVWDYVFFKSA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E W+Y+ + +P + MR EF YWYP+D+R SGK
Sbjct: 534 EFWEYIMLGNGNPDEISKISGIPVEVIKAMRDEFLYWYPLDVRHSGK 580
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 131/341 (38%), Gaps = 99/341 (29%)
Query: 78 VGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCT 137
V DA KFFTT FPY N HLGH + + R+ R++G VLFP FH T
Sbjct: 16 VFDATPDPNKKKFFTTIAFPYPNSPFHLGHGRTYVTGDIYARYMRMRGYNVLFPMAFHYT 75
Query: 138 GMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSA 197
G PI A AD D +KG K
Sbjct: 76 GTPIIAMAD----------------------------------DVAKGDKELI------- 94
Query: 198 KYQWQIMQSL-GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPF 256
I +S+ + DD I K D ++F Q ++ IG+ +DWRR F T D P
Sbjct: 95 ----DIFKSIYEIPDDVISKLVDPLFMANYFKEEIKQAMKEIGLSIDWRREFTTID--PE 148
Query: 257 FDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVK 316
F SF+ WQF +L+++ F RD P VG
Sbjct: 149 FSSFIIWQFRKLQEKG----------FIVRDTHP-----------VG------------- 174
Query: 317 PYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFLVAATLRP 376
C + PV + T + P++ L DS L ATLRP
Sbjct: 175 -----WCPVHHIPVGM-----------HDTKGDMEPEIGEFVLIYFDSDMGILPVATLRP 218
Query: 377 ETMYGQTNAWVRPDMAYIAFTTATGEVFVCTERSARNMAYQ 417
ET++G WV P +Y + G+ +V +E+++ +++Q
Sbjct: 219 ETVFGAIAVWVNPHESY-SIVEIDGKKYVMSEKASSKLSFQ 258
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 41/233 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
GKDL+ NHL+FFI+ H AI+ + +WP+GI NG +L + KMSKS N + L +A++
Sbjct: 579 GKDLVPNHLSFFIFNHAAIFPHQ--LWPKGIAVNGFVLYDGKKMSKSLRNIVPLRKAIRM 636
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+S D +R+ L + D D NF +S A + + D++++
Sbjct: 637 YSPDVIRIALTTNADIGSDVNFSDSYAKSII----------------DTLKN-------- 672
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
Y +E +KE G + F +K S+ + + + + +
Sbjct: 673 ------YYDLLEKLKEF--------KGEDEGFPEKWLKSKFYQMVINVTQYMDSLDLRSS 718
Query: 1389 LRTGFFELQAARDKYRELTAAEGGM-HRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ + ++Y EL +EG + L+ + +++ LL P PH AE +
Sbjct: 719 SNEILYNFSSYINEYFELVRSEGREPNGKLLSQILQIWIKLLSPFAPHFAEEL 771
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Query: 594 RCSGKVSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQ 631
R G + T LPWD++W+IESLSDSTIYMA+YT+AH L+
Sbjct: 486 RTRG-LGTPLPWDKKWIIESLSDSTIYMAFYTIAHRLK 522
>sp|A3DKS1|SYL_STAMF Leucine--tRNA ligase OS=Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1) GN=leuS PE=3 SV=1
Length = 969
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 157/561 (27%), Positives = 255/561 (45%), Gaps = 123/561 (21%)
Query: 657 DPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVG--EFKG 714
+P+ II VP A V E++ I SQ D +L EA ++VY + +Y G+M+V EFKG
Sbjct: 365 EPIKIIDVPGIKGHHAGIVVEEMGISSQFDP-RLVEATKIVYREQYYKGVMIVDDPEFKG 423
Query: 715 KKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYA 774
V E K+ ++KK+ +RE+KG
Sbjct: 424 LSVSEAKEKIKKKL------------------------LRENKGF--------------- 444
Query: 775 ALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLA-NMNTYHDEVRR 833
+L +K R ++ + QW++DY P WK A++ ++ M + ++
Sbjct: 445 VFYELNRKAYCR----AGGKIIAAKIIGQWFIDYSVPWWKEEAKKYVSEKMRIIPVKYKK 500
Query: 834 NFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 893
+++WL C+R GLGT+LP+D +W+IESLSDSTIYMA+YT+AHL++
Sbjct: 501 AMLDAIDWLERRPCARKRGLGTRLPFDPEWVIESLSDSTIYMAFYTIAHLIRKH------ 554
Query: 894 GNALNIKAEDLTPEVWDYVFF-KAAP--FPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 950
NIK E L P+V+DYVF K P +P L+ MR+EF YWYPVD R +G
Sbjct: 555 ----NIKPEQLKPQVFDYVFLGKGDPEEISEDTGIPLKALEEMRQEFNYWYPVDQRHTGI 610
Query: 951 DLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLI 1010
I NHL+FFIY H AI+ + WP+ I N +++ + ++ + + ++
Sbjct: 611 AHISNHLSFFIYHHIAIFPR--KHWPKMITLN-EMVIREGTKMSKSKGNVILLRDIAEKY 667
Query: 1011 QNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADG 1070
L F +YI A AN +L+ E + +++KKF+A
Sbjct: 668 SADL-FRLYIAGA--------------ANLDTVLDW-----REKEVERVIDSLKKFTAIA 707
Query: 1071 MRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFL 1130
+ G D +I+ K L+ + L + ++ +
Sbjct: 708 EKAIRTKCGTYSHD----------------KYID--KWFLSKFNRLLAEATNALD----- 744
Query: 1131 SEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQA 1190
N++I+ D+ KM F+++ + D YRE T+ E + ++ R +
Sbjct: 745 ---NMEIR---DYVQKM---------FYDVMVSIDHYRERTSNEETI--CMIKRILSKWL 787
Query: 1191 LLLCPVCPHVAEHVYQLLGKD 1211
L PV PH+ E ++ +GK+
Sbjct: 788 KSLNPVIPHLTEEIWSWMGKE 808
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 15/180 (8%)
Query: 423 EGKINVLLRLTGQVCIRSGDECVVA-LCDQWYLDYGEPTWKAAAEQCLA-NMNTYHDEVR 480
E K V L + R+G + + A + QW++DY P WK A++ ++ M + +
Sbjct: 440 ENKGFVFYELNRKAYCRAGGKIIAAKIIGQWFIDYSVPWWKEEAKKYVSEKMRIIPVKYK 499
Query: 481 RNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGE 540
+ +++WL C+R GLGT+LP+D +W+IESLSDSTIYMA+YT+AHL++
Sbjct: 500 KAMLDAIDWLERRPCARKRGLGTRLPFDPEWVIESLSDSTIYMAFYTIAHLIRKH----- 554
Query: 541 NGNALNIKAEDLTPEVWDYVFF-KSAP--FPPKCRVPKAKLDIMRREFQYWYPVDLRCSG 597
NIK E L P+V+DYVF K P +P L+ MR+EF YWYPVD R +G
Sbjct: 555 -----NIKPEQLKPQVFDYVFLGKGDPEEISEDTGIPLKALEEMRQEFNYWYPVDQRHTG 609
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 52/281 (18%)
Query: 83 RSSPDD-KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPI 141
R PD K+F T P+PY N LH+GH + + + R+ RL+G VLFP FH TG PI
Sbjct: 30 RIEPDKPKYFITVPYPYTNAPLHIGHGRTYTIGDIIARYKRLRGYNVLFPMAFHITGTPI 89
Query: 142 KACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQW 201
A ++++ R E I ++ K +K V +
Sbjct: 90 IAISERISRGEEE------------------------IINRYKSYIAKYVKDPVEIE--- 122
Query: 202 QIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFV 261
+I++S F D + F D ++G +DWRR F T + P +++FV
Sbjct: 123 KIIES----------FKDPLNLAVFFAERVHMDFDALGYSIDWRRRFHTGE--PIYNAFV 170
Query: 262 RWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHD--RASGEGVGPQEYTLIKMRLVKPYP 319
WQF++LR++ IK G + QP + D A V E+T IK +L
Sbjct: 171 TWQFLKLREKGLIKRGDHVVTYCLLHKQPEGEDDIQDADVNPVEILEFTAIKFKL----- 225
Query: 320 AKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALS 360
L + +LVAATLRPET++G TN WV+PD Y+ +
Sbjct: 226 -----LGEENTYLVAATLRPETLFGATNLWVKPDADYVVVE 261
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 47/232 (20%)
Query: 1213 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSAD 1272
I NHL+FFIY H AI+ + WP+ I N ++ KMSKS+GN + L + +K+SAD
Sbjct: 613 ISNHLSFFIYHHIAIFPRK--HWPKMITLNEMVIREGTKMSKSKGNVILLRDIAEKYSAD 670
Query: 1273 GMRLCLADSG--DSVED--ANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
RL +A + D+V D VE + D ++KKF+A +
Sbjct: 671 LFRLYIAGAANLDTVLDWREKEVERVID-SLKKFTAIAEK-------------------- 709
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
A ++ T S D + DK FLS+ N + E + M ++
Sbjct: 710 ------------------AIRTKCGTYSHDKYIDKWFLSKFNRLLAEATNALDNMEIRDY 751
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
++ F+++ + D YRE T+ E + ++ R + L PV PH+ E +
Sbjct: 752 VQKMFYDVMVSIDHYRERTSNEETI--CMIKRILSKWLKSLNPVIPHLTEEI 801
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 595 CSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 639
C+ K + T+LP+D +W+IESLSDSTIYMA+YT+AHL++ + E
Sbjct: 514 CARKRGLGTRLPFDPEWVIESLSDSTIYMAFYTIAHLIRKHNIKPEQ 560
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 1441 EMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQAL 1500
+ N + E + M ++ ++ F+++ + D YRE T+ E + ++ R +
Sbjct: 731 KFNRLLAEATNALDNMEIRDYVQKMFYDVMVSIDHYRERTSNEETI--CMIKRILSKWLK 788
Query: 1501 LLCPVCPHVAEHVYQLLGKKGSIVKARWPEGGPID-DILVRSSSYLMEAAHAFRLQVKNH 1559
L PV PH+ E ++ +GK+ + +WPE ID + YL EA A +KN
Sbjct: 789 SLNPVIPHLTEEIWSWMGKEEFLSLEKWPE---IDYKAINEEVEYLEEAIEALIEDIKNV 845
Query: 1560 ILTASKKKGKKVGGGGVGLVEKPTHATVWVAKTFPPWQSIVLTTMKQMMEVREPTATL 1617
+ S KP HA + VA PW+ V+ +++ M+ RE T+
Sbjct: 846 LNILSP---------------KPKHAYIVVAS---PWKREVIEMIEKGMDRREIIRTI 885
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 704 DGIMLVGEFKGKKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVT 763
D +VGE KG+ +++G + +P+ + ++ LP + D TGIV
Sbjct: 284 DEFKVVGEMKGR-------------ELVGKKVVSPLGNELIV--LPADFVDPDNATGIVY 328
Query: 764 SVPSDSPDDYAALVDLKKKPPFREKYHVTDEMC 796
S PSD+P DY AL++LKK Y V E+
Sbjct: 329 SEPSDAPYDYVALMELKKNSEKLAMYGVDPEVV 361
>sp|A6UTK3|SYL_META3 Leucine--tRNA ligase OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=leuS PE=3 SV=1
Length = 969
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 174/339 (51%), Gaps = 61/339 (17%)
Query: 659 VPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIML--VGEFKGKK 716
+ +I++ YG A + EK+ I +Q D +KL++A +Y + F+ GI+ GE++G
Sbjct: 375 ISLIKIDGYGKYPAKEIVEKMGITNQKD-EKLEDATHTIYKQEFHKGILNENCGEYEGIA 433
Query: 717 VQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAAL 776
V+++K L + ++++ TL SI E +V
Sbjct: 434 VRDIKD-----------KLASDFINNNMAETLQEFSIPE-----VVCRC----------- 466
Query: 777 VDLKKKPPFREKYHVTDEMCVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNF 835
E C+V QW++ Y + WK A + MN + +R +F
Sbjct: 467 ----------------GEKCIVKTVKGQWFITYSDLEWKKKAHNWVDKMNFVPETIRMDF 510
Query: 836 GASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGN 895
++W+ + AC+R GLGT+ P+D+ W+IESLSDST+YMAYYTVA + N
Sbjct: 511 HNKIDWMKDKACARKKGLGTRFPFDKDWVIESLSDSTLYMAYYTVAKTI----------N 560
Query: 896 ALNIKAEDLTPEVWDYVFFKAA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDL 952
NI E L PE++DYV++ ++P ++ MR EF+Y+YP+D RCS KDL
Sbjct: 561 TNNILPEQLIPELFDYVYYGKGDINEISNNTKIPVELINEMRNEFEYYYPLDWRCSAKDL 620
Query: 953 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAK 991
+ NHLTF I+ H A++ DE + +P+GI NG++ + K
Sbjct: 621 VPNHLTFMIFNHVALFDDE-KYYPKGIVVNGYVTIEGKK 658
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 14/168 (8%)
Query: 435 QVCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEY 493
+V R G++C+V QW++ Y + WK A + MN + +R +F ++W+ +
Sbjct: 461 EVVCRCGEKCIVKTVKGQWFITYSDLEWKKKAHNWVDKMNFVPETIRMDFHNKIDWMKDK 520
Query: 494 ACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLT 553
AC+R GLGT+ P+D+ W+IESLSDST+YMAYYTVA + N NI E L
Sbjct: 521 ACARKKGLGTRFPFDKDWVIESLSDSTLYMAYYTVAKTI----------NTNNILPEQLI 570
Query: 554 PEVWDYVFFKSA---PFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
PE++DYV++ ++P ++ MR EF+Y+YP+D RCS K
Sbjct: 571 PELFDYVYYGKGDINEISNNTKIPVELINEMRNEFEYYYPLDWRCSAK 618
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 123/281 (43%), Gaps = 57/281 (20%)
Query: 88 DKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADK 147
DKFF T FPY+NG LH GH + + E + R+ R+ K VL+ FGFH +G PI A+
Sbjct: 37 DKFFITAAFPYLNGVLHAGHLRTFTIPEITARYQRMNNKTVLWTFGFHVSGTPIIGLAEL 96
Query: 148 LKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSL 207
LK++ P+T W +
Sbjct: 97 LKKQA---------------PET-----------------------------IWAYNKLH 112
Query: 208 GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMR 267
+ E++ + +++F A + + +G +DWRR F T D F FV WQF++
Sbjct: 113 NIPMGELQTLTTPENIVNYFSKKATESFKKMGFALDWRRNFKTDDET--FKKFVEWQFLK 170
Query: 268 LRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRL-----VKPYPAKL 322
L++++ I G + P + P DHD GE QEY L+K + + +
Sbjct: 171 LKEKNLIVKGSHPVRYCPSCDNPVEDHDLLKGEEATLQEYILLKFKTKLNIEIDGEDKEY 230
Query: 323 CCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLD 363
C+ + ATLRPET+YG NAW+ P+ Y + D
Sbjct: 231 ECI------IPMATLRPETIYGVVNAWINPNDTYHIIKVYD 265
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 44/233 (18%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
KDL+ NHLTF I+ H A++ DE + +P+GI NG++ + K+SKS+G L + E
Sbjct: 617 AKDLVPNHLTFMIFNHVALFDDE-KYYPKGIVVNGYVTIEGKKLSKSKGPVLPIEEVATN 675
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVE-SM 1327
+ D R + + DA D F E
Sbjct: 676 YGPDVGRFYITTCAELPHDA-------------------------------DVKFKEMEH 704
Query: 1328 ADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKE 1387
A ++R Y E E+ T+ T+ ++ S DK L +++ +K + Y + ++
Sbjct: 705 ARDNLIRFY---ELATELKDTEKTI---TELSTIDKWLLHKVHSDLKIINESYNEFQLRK 758
Query: 1388 ALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ T F+ L Y+ GG + L+ VE+ +L P+ PH+ E +
Sbjct: 759 -IGTLFYGLTHNLKWYKR----RGGNNNQLLKYVVEIWTKVLAPITPHLCEEI 806
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 15/66 (22%)
Query: 592 DLRCSGK--VSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNINCVI 649
D C+ K + T+ P+D+ W+IESLSDST+YMAYYTVA +N N ++
Sbjct: 519 DKACARKKGLGTRFPFDKDWVIESLSDSTLYMAYYTVAK-------------TINTNNIL 565
Query: 650 VFQVLP 655
Q++P
Sbjct: 566 PEQLIP 571
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 18/112 (16%)
Query: 673 VTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIMLVGEFKGKKVQEVKKLLQ-----KK 727
+ VY++ +QSQ +E + + LK Y+GI +V + K++ + ++ K
Sbjct: 261 IKVYDE--VQSQ------EEGSDEISLK--YNGIWIVSKEASDKLKNQDRTVELIKEIKG 310
Query: 728 IDIIGVALKAPVTSHSV-IYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVD 778
+++G + PV + V +Y P + + GTG V SVP+ +P D+ AL D
Sbjct: 311 EELVGKIVINPVNNKEVPLY--PADFVSSEMGTGCVMSVPAHAPKDFVALRD 360
>sp|O27552|SYL_METTH Leucine--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=leuS PE=3 SV=1
Length = 937
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 162/338 (47%), Gaps = 71/338 (21%)
Query: 657 DPVPIIQVPEYGNLCAVTVYEKLKIQSQNDKDKLQEAKELVYLKGFYDGIML--VGEFKG 714
+PV +I V YG A V EK +++Q D +L++A +Y G+M + + G
Sbjct: 340 EPVNVIAVDGYGEFPAAEVIEKFGVRNQEDP-RLEDATGELYKIEHARGVMSSHIPVYGG 398
Query: 715 KKVQEVKKLLQKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYA 774
KV E ++++ ++ G+A
Sbjct: 399 MKVSEAREVIADELKDQGLA---------------------------------------D 419
Query: 775 ALVDLKKKPPFREKYHVTDEMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRN 834
+ + ++P V + DQW++ Y + WK A +CL M +EVR N
Sbjct: 420 EMYEFAERPVI---CRCGGRCVVRVMEDQWFMKYSDDAWKDLAHRCLDGMKIIPEEVRAN 476
Query: 835 FGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENG 894
F ++WL+++ACSR GLGT+LPWDE+W+IE L+DSTIYMAYYT+AH L+
Sbjct: 477 FEYYIDWLNDWACSRRIGLGTRLPWDERWIIEPLTDSTIYMAYYTIAHRLR--------- 527
Query: 895 NALNIKAEDLTPEVWDYVFFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQ 954
+ A ++ E +D +F + + +R EF+YWYP+D R S KDLI
Sbjct: 528 ---EMDAGEMDDEFFDAIFLDDS----------GTFEDLREEFRYWYPLDWRLSAKDLIG 574
Query: 955 NHLTFFIYIHTAIWGDEPEM-WPRGIRANGHLLLNSAK 991
NHLTF I+ H+AI+ PE WPRG G LL K
Sbjct: 575 NHLTFHIFHHSAIF---PESGWPRGAVVFGMGLLEGNK 609
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 95/164 (57%), Gaps = 23/164 (14%)
Query: 436 VCIRSGDECVV-ALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYA 494
V R G CVV + DQW++ Y + WK A +CL M +EVR NF ++WL+++A
Sbjct: 429 VICRCGGRCVVRVMEDQWFMKYSDDAWKDLAHRCLDGMKIIPEEVRANFEYYIDWLNDWA 488
Query: 495 CSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTP 554
CSR GLGT+LPWDE+W+IE L+DSTIYMAYYT+AH L+ + A ++
Sbjct: 489 CSRRIGLGTRLPWDERWIIEPLTDSTIYMAYYTIAHRLR------------EMDAGEMDD 536
Query: 555 EVWDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E +D +F + + +R EF+YWYP+D R S K
Sbjct: 537 EFFDAIFLDDS----------GTFEDLREEFRYWYPLDWRLSAK 570
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 61/281 (21%)
Query: 83 RSSPDD--KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMP 140
++ PDD K F T +PY +G +H+GH + + + RF R++G VLFP +H TG P
Sbjct: 18 QADPDDREKIFLTVAYPYPSGAMHIGHGRTYTVPDVYARFKRMQGYNVLFPMAWHVTGAP 77
Query: 141 IKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQ 200
+ A +++R KD K + V +
Sbjct: 78 VIGIARRIQR-----------------------------KDPWTLKIYREVHR------- 101
Query: 201 WQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSF 260
+ +DE+ +F+D + +++F + +G +DWRR F TTD P + F
Sbjct: 102 --------VPEDELERFSDPEYIVEYFSREYRSVMEDMGYSIDWRREFKTTD--PTYSRF 151
Query: 261 VRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPA 320
++WQ +LRD ++ G + P P DHD GEGV + TL+K +L Y
Sbjct: 152 IQWQIRKLRDLGLVRKGAHPVKYCPECENPVGDHDLLEGEGVAINQLTLLKFKLGDSY-- 209
Query: 321 KLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSC 361
LVAAT RPET+YG TN W+ PD Y+ +
Sbjct: 210 -----------LVAATFRPETIYGATNLWLNPDEDYVRVET 239
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 1008 DLIQNHLTFFIYIHTAIWGDEPEM-WPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKF 1066
DLI NHLTF I+ H+AI+ PE WPRG G LL KMS S+GN + L +A++K
Sbjct: 571 DLIGNHLTFHIFHHSAIF---PESGWPRGAVVFGMGLLEGNKMSSSKGNVILLRDAIEKH 627
Query: 1067 SADGMRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTG------- 1119
AD +RL L S + +D ++ ES ++ IEW +E S + G
Sbjct: 628 GADVVRLFLMSSAEPWQDFDWRESE----VIGTRRRIEWFREFGERVSGILDGRPVLSEV 683
Query: 1120 ---SQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGG 1176
+SF + + ++N +I+E ++A++ + L+ D Y L EG
Sbjct: 684 TPAEPESFIGRWMMGQLNQRIREATRALESFQTRKAVQEALYLLKKDVDHY--LKRVEGR 741
Query: 1177 MH---RTLVLRFVEVQALLLCPVCPHVAEHVYQLLG 1209
+ ++++ + L+ P P+ AE +++ G
Sbjct: 742 VDDEVKSVLANVLHAWIRLMAPFIPYTAEEMWERYG 777
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 36/240 (15%)
Query: 1205 YQLLGKDLIQNHLTFFIYIHTAIWGDEPEM-WPRGIRANGHLLLNSAKMSKSEGNFLTLT 1263
++L KDLI NHLTF I+ H+AI+ PE WPRG G LL KMS S+GN + L
Sbjct: 565 WRLSAKDLIGNHLTFHIFHHSAIF---PESGWPRGAVVFGMGLLEGNKMSSSKGNVILLR 621
Query: 1264 EAVKKFSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANF 1323
+A++K AD +RL L S + +D ++ ES ++ + G+ V
Sbjct: 622 DAIEKHGADVVRLFLMSSAEPWQDFDWRESEVIGTRRRIE------WFREFGERV----- 670
Query: 1324 VESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKM 1383
+GIL + S + +SF + + ++N +I+E
Sbjct: 671 ------SGILDGRPVL----------SEVTPAEPESFIGRWMMGQLNQRIREATRALESF 714
Query: 1384 LFKEALRTGFFELQAARDKYRELTAAEGGMH---RTLVLRFVEVQALLLCPVCPHVAEHV 1440
++A++ + L+ D Y L EG + ++++ + L+ P P+ AE +
Sbjct: 715 QTRKAVQEALYLLKKDVDHY--LKRVEGRVDDEVKSVLANVLHAWIRLMAPFIPYTAEEM 772
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
Query: 581 MRREFQYW--YPVDLRCSGKVS--TKLPWDEQWLIESLSDSTIYMAYYTVAHLLQ 631
+R F+Y+ + D CS ++ T+LPWDE+W+IE L+DSTIYMAYYT+AH L+
Sbjct: 473 VRANFEYYIDWLNDWACSRRIGLGTRLPWDERWIIEPLTDSTIYMAYYTIAHRLR 527
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 729 DIIGVALKAPVTS--HSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFR 786
D+IG+ ++ PVT H + LP + + TG+V SVP+ +P D+ AL DL+
Sbjct: 271 DLIGMCVENPVTGQEHPI---LPASFVDPEYATGVVFSVPAHAPADFIALEDLRTDHELL 327
Query: 787 EKYHVTDEMCVVALCDQWYLD-YGE 810
E+Y + D + + + +D YGE
Sbjct: 328 ERYGLEDVVADIEPVNVIAVDGYGE 352
>sp|A4YE96|SYL1_METS5 Leucine--tRNA ligase 1 OS=Metallosphaera sedula (strain ATCC 51363 /
DSM 5348) GN=leuS1 PE=3 SV=1
Length = 938
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 185/428 (43%), Gaps = 92/428 (21%)
Query: 794 EMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGL 853
E+ V + DQWY+ Y P WK+ + L ++ +E RR+ ++ + ACSR+ GL
Sbjct: 435 EIVVKVIRDQWYITYDNPLWKSWTMKALDRISIVPEEARRDMAKAIFSMKRRACSRSRGL 494
Query: 854 GTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVF 913
G KLPWDE +I+SLSDSTIY +YTVAH L+ L + WD+V
Sbjct: 495 GVKLPWDESQIIDSLSDSTIYTGFYTVAH-------------KLSHDPSKLNDQFWDFVL 541
Query: 914 F---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQNHLTFFIYIHTAIWGD 970
A+ + +L +R EF YW
Sbjct: 542 LGNGDASEVSKVTGISVEELKDLRNEFSYW------------------------------ 571
Query: 971 EPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHLTFFIYIHTAIWGDEPE 1030
+P R +G DL+QNHL F IY H AI+G+
Sbjct: 572 ----YPLDSRHSGR-----------------------DLVQNHLPFLIYNHLAIFGES-- 602
Query: 1031 MWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLCLADSGDSVEDANF--- 1087
+ PR I NG + + KMSKS N L +AV+++ D +RL L S + +ED +F
Sbjct: 603 LLPRQIVINGFVRVGGKKMSKSFRNIYPLYKAVEEYGVDPVRLALTISSELLEDTDFDVN 662
Query: 1088 -VESMADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTK 1146
V+++ D + R+Y ++ S LR +K LS ++ K+KE D
Sbjct: 663 TVKAVTDQ-LRRMY-------DLAVNLSKLRENESTGLPEKWLLSIIHYKVKEVSDLMNS 714
Query: 1147 MLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHVY 1205
+ ++A +E Y + + T VLR +E+ A L+ P PH+AE ++
Sbjct: 715 LDLRKAFNIILYEYYEILRDYLSMVSNPN----TSVLRKAIEIWARLISPGAPHIAEEIW 770
Query: 1206 QLLGKDLI 1213
+ + +
Sbjct: 771 HIFNEGFV 778
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 99/189 (52%), Gaps = 20/189 (10%)
Query: 424 GKINVLLRLT-GQVCIRSGDECVVALC-DQWYLDYGEPTWKAAAEQCLANMNTYHDEVRR 481
GK +++ ++ G + R G E VV + DQWY+ Y P WK+ + L ++ +E RR
Sbjct: 415 GKHDLIYEISNGPIYCRCGAEIVVKVIRDQWYITYDNPLWKSWTMKALDRISIVPEEARR 474
Query: 482 NFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGEN 541
+ ++ + ACSR+ GLG KLPWDE +I+SLSDSTIY +YTVAH
Sbjct: 475 DMAKAIFSMKRRACSRSRGLGVKLPWDESQIIDSLSDSTIYTGFYTVAH----------- 523
Query: 542 GNALNIKAEDLTPEVWDYVFFKSAPFPPKCRVPK---AKLDIMRREFQYWYPVDLRCSGK 598
L+ L + WD+V + +V +L +R EF YWYP+D R SG+
Sbjct: 524 --KLSHDPSKLNDQFWDFVLLGNGDASEVSKVTGISVEELKDLRNEFSYWYPLDSRHSGR 581
Query: 599 --VSTKLPW 605
V LP+
Sbjct: 582 DLVQNHLPF 590
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 60/292 (20%)
Query: 68 KFREKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKR 127
K++EK V +A S +K+F T FPY N LH+GH + + R+ R+ GK
Sbjct: 12 KWQEKWENNKVFEA-NPSNSEKYFITVAFPYTNSPLHIGHGRTYITADIVARYQRMIGKN 70
Query: 128 VLFPFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKK 187
VLFPF F TG PI + ++ +KR D +I D
Sbjct: 71 VLFPFAFQFTGTPILSISESIKR-----------------------GDSDIISD------ 101
Query: 188 SKAVAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRT 247
+ + +++R+F D ++F + +++G+ VDWRR
Sbjct: 102 ---------------FINLYKISPEKVREFEDPLKLAEYFKEDMKRMAKALGLSVDWRRE 146
Query: 248 FITTDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEY 307
F T D P F F++WQF +L+++ I + P DN P HD QE
Sbjct: 147 FTTID--PRFGQFIKWQFRKLKEKGFITTATDAVGYCPNDNFPVGMHDTKGDVEPEVQEM 204
Query: 308 TLIKMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIAL 359
+I+ + V AT RPET++G + P+ Y+ +
Sbjct: 205 DVIE-------------FEGNDVVFPTATSRPETVFGANAVLINPEATYVLI 243
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 44/233 (18%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
G+DL+QNHL F IY H AI+G+ + PR I NG + + KMSKS N L +AV++
Sbjct: 580 GRDLVQNHLPFLIYNHLAIFGES--LLPRQIVINGFVRVGGKKMSKSFRNIYPLYKAVEE 637
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ D +RL L S + +ED +F D N V+++
Sbjct: 638 YGVDPVRLALTISSELLEDTDF-----------------------------DVNTVKAVT 668
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
D + R+Y ++ S LR +K LS ++ K+KE D + ++A
Sbjct: 669 DQ-LRRMY-------DLAVNLSKLRENESTGLPEKWLLSIIHYKVKEVSDLMNSLDLRKA 720
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLR-FVEVQALLLCPVCPHVAEHV 1440
+E Y + + T VLR +E+ A L+ P PH+AE +
Sbjct: 721 FNIILYEYYEILRDYLSMVSNPN----TSVLRKAIEIWARLISPGAPHIAEEI 769
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 596 SGKVSTKLPWDEQWLIESLSDSTIYMAYYTVAHLL 630
S + KLPWDE +I+SLSDSTIY +YTVAH L
Sbjct: 491 SRGLGVKLPWDESQIIDSLSDSTIYTGFYTVAHKL 525
>sp|Q974N4|SYL1_SULTO Leucine--tRNA ligase 1 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=leuS1 PE=3 SV=1
Length = 945
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 182/423 (43%), Gaps = 81/423 (19%)
Query: 794 EMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGL 853
E+ V + QW++DY P WK + + L +N + ++ + L A +R+ GL
Sbjct: 440 EIVVKVIKGQWFIDYSNPIWKTSVLKSLDKINFIPTDSKKEMEKIIFNLQPRAFTRSRGL 499
Query: 854 GTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVF 913
G +LPWDE+ +I+SLSDSTIY A+YT+ H L L+ + WDY+
Sbjct: 500 GVRLPWDEKEIIDSLSDSTIYTAFYTIVH-------------KLKYPISLLSDKFWDYIL 546
Query: 914 FK---AAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQNHLTFFIYIHTAIWGD 970
A + +PK +L+ ++ EF+YW
Sbjct: 547 LDRGTADEISKELGIPKEQLEEIKSEFKYW------------------------------ 576
Query: 971 EPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHLTFFIYIHTAIWGDEPE 1030
+P R +G DLIQNHL ++++ H AI+G++
Sbjct: 577 ----YPVDSRHSGR-----------------------DLIQNHLPYYLFHHFAIFGEK-- 607
Query: 1031 MWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLCLADSGDSVEDANFVES 1090
PR I NG + + KMSKS GN L A+ ++ + +R+ L + +D F +
Sbjct: 608 FLPRQIVTNGFIRVGGKKMSKSFGNIYPLNRAIDEYGVETVRIALTSTSSISDDIEFNSN 667
Query: 1091 MADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFK 1150
+A + +L + + ++L + D + LS I++ + Y + +
Sbjct: 668 IAKSIAEQLKKIHDLISKLLEIEGVNERRDPDVW----LLSIFRRYIEDVDKAYENLDLR 723
Query: 1151 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHVYQLLGK 1210
T ++ + Y ELT A+ +++ ++ + + + L+ P+ PH+AE ++ +
Sbjct: 724 TVYMTVYYTIYETIKDYIELTNAK--INKDIIKKVISIWLRLMAPITPHLAEELWHKMSN 781
Query: 1211 DLI 1213
+
Sbjct: 782 TFV 784
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 409 RSARNMAYQGFTEVEGKINVLLRLTGQVCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQ 467
+ AR + + +I + G V R G E VV + QW++DY P WK + +
Sbjct: 406 KDAREKTRELLDMLNSRITIYEISNGPVYCRCGAEIVVKVIKGQWFIDYSNPIWKTSVLK 465
Query: 468 CLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYT 527
L +N + ++ + L A +R+ GLG +LPWDE+ +I+SLSDSTIY A+YT
Sbjct: 466 SLDKINFIPTDSKKEMEKIIFNLQPRAFTRSRGLGVRLPWDEKEIIDSLSDSTIYTAFYT 525
Query: 528 VAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKSAP---FPPKCRVPKAKLDIMRRE 584
+ H L L+ + WDY+ + +PK +L+ ++ E
Sbjct: 526 IVH-------------KLKYPISLLSDKFWDYILLDRGTADEISKELGIPKEQLEEIKSE 572
Query: 585 FQYWYPVDLRCSGK--VSTKLPW 605
F+YWYPVD R SG+ + LP+
Sbjct: 573 FKYWYPVDSRHSGRDLIQNHLPY 595
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 112/283 (39%), Gaps = 64/283 (22%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
K F T FPY N LH+GH + + R+ R+KG VLFPF F TG PI + ++ +
Sbjct: 34 KKFITVAFPYTNSPLHIGHGRTYITADIYARYLRMKGYNVLFPFAFQFTGTPILSISESV 93
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
KR G + +
Sbjct: 94 KR--------------------------------------------GDEEIISTFVNIYQ 109
Query: 209 LEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMRL 268
+ +EI KF+D ++ ++F + +G+ +DWRR F T D P F+ FV+WQ+ +L
Sbjct: 110 IPKEEIEKFSDPTYLAEYFKNNMKNTAKKLGLGIDWRREFTTVD--PIFEKFVQWQYRKL 167
Query: 269 RDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKL--CCLD 326
+ IK + PRD P HD V+P L
Sbjct: 168 MELGYIKREDSPVAYCPRDEFPVGMHDTKGD---------------VEPEITDLDGIYFP 212
Query: 327 SKPVFLVAATLRPETMYGQTNAWVRPDMAY-IALSCLDSKPVF 368
S F +AAT RPET++G V P+ Y IA L+ K +
Sbjct: 213 SGDYFFIAATPRPETIFGAVALLVNPEADYVIATDSLNRKVII 255
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 41/232 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
G+DLIQNHL ++++ H AI+G++ PR I NG + + KMSKS GN L A+ +
Sbjct: 585 GRDLIQNHLPYYLFHHFAIFGEK--FLPRQIVTNGFIRVGGKKMSKSFGNIYPLNRAIDE 642
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ + +R+ L + +D F ++N +S+A
Sbjct: 643 YGVETVRIALTSTSSISDDIEF-----------------------------NSNIAKSIA 673
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
+ +L + + ++L + D + LS I++ + Y + +
Sbjct: 674 E----QLKKIHDLISKLLEIEGVNERRDPDVW----LLSIFRRYIEDVDKAYENLDLRTV 725
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
T ++ + Y ELT A+ +++ ++ + + + L+ P+ PH+AE +
Sbjct: 726 YMTVYYTIYETIKDYIELTNAK--INKDIIKKVISIWLRLMAPITPHLAEEL 775
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 596 SGKVSTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQ 631
S + +LPWDE+ +I+SLSDSTIY A+YT+ H L+
Sbjct: 496 SRGLGVRLPWDEKEIIDSLSDSTIYTAFYTIVHKLK 531
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 725 QKKIDIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKK 782
+K D++G+ K PVT I LP + GTG+V +VPS P Y AL +LK++
Sbjct: 275 KKGKDLVGMIAKNPVTEKE-IKVLPSKFVDPSIGTGVVMAVPSHEPLHYIALTELKEE 331
>sp|P58176|SYL1_SULSO Leucine--tRNA ligase 1 OS=Sulfolobus solfataricus (strain ATCC 35092
/ DSM 1617 / JCM 11322 / P2) GN=leuS1 PE=3 SV=1
Length = 934
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 183/423 (43%), Gaps = 87/423 (20%)
Query: 794 EMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGL 853
E+ + DQW++ Y P WKA+A + + N+ + + + + R+ G+
Sbjct: 437 EIVPKRIKDQWFIAYDNPKWKASALKAINNIELIPNPTKTELEKIVFNARKEPIGRSRGI 496
Query: 854 GTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVF 913
G KLPWDE ++ESLSDST+Y YTV + + +NI+ E ++D++F
Sbjct: 497 GVKLPWDESQIVESLSDSTLYTLLYTVIYKM-----------PINIEKE-----IFDFIF 540
Query: 914 FKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQNHLTFFIYIHTAIWGDEPE 973
R L +R EF YWYPVD R +G+DLIQNH+ F+IY H AI+G+ +
Sbjct: 541 LGKGDAKELERKYGTDLIQLREEFLYWYPVDQRHTGRDLIQNHIPFYIYNHLAIFGE--K 598
Query: 974 MWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHLTFFIYIHTAIWGDEPEMWP 1033
P+ I NG
Sbjct: 599 YLPKRIVINGF------------------------------------------------- 609
Query: 1034 RGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLCLADSGDSVEDANFVESMAD 1093
+R G + S + N TL++A+K+F D +R+ L + D ++D +F E++ +
Sbjct: 610 --VRVGGRKMSKSLR------NIYTLSKAIKEFGVDPVRIALTSTSDLLQDLDFNENLVN 661
Query: 1094 A---GILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFK 1150
+ ++Y I+ + I LRT D+ S++ I++ ++ T ++
Sbjct: 662 PIAEQLKKIYDLIDRLLSINTEIKELRTA------DEWISSKVRDIIEKVNNNITSFKYR 715
Query: 1151 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHVYQLLGK 1210
+A+ +E+ Y +L ++ ++ + + + L P PH+AE ++ +
Sbjct: 716 DAVNLLLYEIYEILRDYFDLVEIP---NQEVIRKILSIWIRALAPFVPHIAEELWHKISS 772
Query: 1211 DLI 1213
+
Sbjct: 773 TFV 775
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 109/272 (40%), Gaps = 60/272 (22%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
KFF T PFPY N +H+GH + + R+ R+KG VLFPF F TG P+ A AD +
Sbjct: 33 KFFITVPFPYTNSPMHVGHGRTYITADIYARYLRMKGYNVLFPFAFQFTGTPVLAIADSI 92
Query: 149 KR-EMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSL 207
+R E++ F F + PQ
Sbjct: 93 RRGEVDVIEF---FKNVYEVPQ-------------------------------------- 111
Query: 208 GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMR 267
D+I++ D ++F +SIG+ +DWRRTF TTD P F+ F+ WQ +
Sbjct: 112 ----DKIKELEDPYKLAEYFKEEMKNTAKSIGMSIDWRRTFTTTD--PRFEKFIHWQLGK 165
Query: 268 LRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLIKMRLVKPYPAKLCCLDS 327
L++ + + P D P HD G E + M ++ S
Sbjct: 166 LKELGYLVTEDDVVGYCPNDGFPVGMHDTR-----GDIEPEITTMNVI-------MFEGS 213
Query: 328 KPVFLVAATLRPETMYGQTNAWVRPDMAYIAL 359
+ AT RPE ++G V D Y+ +
Sbjct: 214 DSYNFMVATSRPELIFGVVALMVNHDANYVVV 245
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Query: 433 TGQVCIRSGDECVVA-LCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLH 491
G + R G E V + DQW++ Y P WKA+A + + N+ + + +
Sbjct: 427 NGPIYCRCGSEIVPKRIKDQWFIAYDNPKWKASALKAINNIELIPNPTKTELEKIVFNAR 486
Query: 492 EYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAED 551
+ R+ G+G KLPWDE ++ESLSDST+Y YTV + + +NI+
Sbjct: 487 KEPIGRSRGIGVKLPWDESQIVESLSDSTLYTLLYTVIYKM-----------PINIEK-- 533
Query: 552 LTPEVWDYVFFKSAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGK 598
E++D++F R L +R EF YWYPVD R +G+
Sbjct: 534 ---EIFDFIFLGKGDAKELERKYGTDLIQLREEFLYWYPVDQRHTGR 577
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 41/232 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
G+DLIQNH+ F+IY H AI+G++ P+ I NG + + KMSKS N TL++A+K+
Sbjct: 576 GRDLIQNHIPFYIYNHLAIFGEK--YLPKRIVINGFVRVGGRKMSKSLRNIYTLSKAIKE 633
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
F D +R+ L + D ++D +F E++ + ++
Sbjct: 634 FGVDPVRIALTSTSDLLQDLDFNENLVNPIAEQLK------------------------- 668
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
++Y I+ + I LRT D+ S++ I++ ++ T +++A
Sbjct: 669 -----KIYDLIDRLLSINTEIKELRTA------DEWISSKVRDIIEKVNNNITSFKYRDA 717
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+ +E+ Y +L ++ ++ + + + L P PH+AE +
Sbjct: 718 VNLLLYEIYEILRDYFDLVEIP---NQEVIRKILSIWIRALAPFVPHIAEEL 766
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 594 RCSGKVSTKLPWDEQWLIESLSDSTIYMAYYTVAH 628
R G + KLPWDE ++ESLSDST+Y YTV +
Sbjct: 492 RSRG-IGVKLPWDESQIVESLSDSTLYTLLYTVIY 525
>sp|Q4JBP0|SYL1_SULAC Leucine--tRNA ligase 1 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=leuS1 PE=3 SV=1
Length = 942
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 181/423 (42%), Gaps = 80/423 (18%)
Query: 794 EMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGL 853
E+ V DQW++DY TWK++ + L + + +R + + +R+ GL
Sbjct: 438 EVVVKVFDDQWFIDYSNSTWKSSVLKSLDKIEILPQDAKREISKIIFNMKPRPFTRSRGL 497
Query: 854 GTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVF 913
G +LPWD++ +I+SLSDSTIY +Y VA+ ++ + L WDYV
Sbjct: 498 GVRLPWDDRQIIDSLSDSTIYTVFYIVANKVK------------SYPTSILNERFWDYVV 545
Query: 914 F---KAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQNHLTFFIYIHTAIWGD 970
++ + +PK +L+ +R E +YW
Sbjct: 546 LGRGDSSQLSRELGIPKEQLEELRMEVEYW------------------------------ 575
Query: 971 EPEMWPRGIRANGHLLLNSAKDLIQNHLTFFIYKLFSDLIQNHLTFFIYIHTAIWGDEPE 1030
+P R +G DL+QNH+ +++Y H + G++
Sbjct: 576 ----YPVDSRHSGR-----------------------DLVQNHIPYYLYHHVGVLGEDK- 607
Query: 1031 MWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSADGMRLCLADSGDSVEDANFVES 1090
P+ I NG + + KMSKS GN L +A++++ D +RL L + +D F +
Sbjct: 608 -VPKRIVLNGFIRVGGKKMSKSFGNVYPLNKAIREYGVDTVRLALTSTSSLSDDIEFSPN 666
Query: 1091 MADAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFK 1150
+A + +L ++++ ++ QS D + + ++L ++ + + +
Sbjct: 667 IAKSIGEQLKHIHDFIENLIKLQSVNEIRKVDLWISSLISEYIDL----IDNCLSNLDLR 722
Query: 1151 EALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHVYQLLGK 1210
A +T ++++ Y EL G ++ ++ + V L+ P PH+AE ++ L
Sbjct: 723 TAYKTIYYDIYEDLKDYLEL--GNGKINSDIIKNVISVWIRLMAPFTPHLAEELWHKLDN 780
Query: 1211 DLI 1213
L+
Sbjct: 781 SLV 783
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 409 RSARNMAYQGFTEVEGKINVLLRLTGQVCIRSGDECVVALCD-QWYLDYGEPTWKAAAEQ 467
R AR+ + + N+ + G V R G E VV + D QW++DY TWK++ +
Sbjct: 404 REARSSVVELLRNLGVHGNIYEIINGPVYCRCGAEVVVKVFDDQWFIDYSNSTWKSSVLK 463
Query: 468 CLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMAYYT 527
L + + +R + + +R+ GLG +LPWD++ +I+SLSDSTIY +Y
Sbjct: 464 SLDKIEILPQDAKREISKIIFNMKPRPFTRSRGLGVRLPWDDRQIIDSLSDSTIYTVFYI 523
Query: 528 VAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFF---KSAPFPPKCRVPKAKLDIMRRE 584
VA+ ++ + L WDYV S+ + +PK +L+ +R E
Sbjct: 524 VANKVK------------SYPTSILNERFWDYVVLGRGDSSQLSRELGIPKEQLEELRME 571
Query: 585 FQYWYPVDLRCSGK--VSTKLPW 605
+YWYPVD R SG+ V +P+
Sbjct: 572 VEYWYPVDSRHSGRDLVQNHIPY 594
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 138/610 (22%), Positives = 234/610 (38%), Gaps = 153/610 (25%)
Query: 71 EKIYEETVGDAVRSSPDDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLF 130
E++YE D R+ +K F T FPY N LH+GH + + R+ R+KG VLF
Sbjct: 18 ERVYE---ADVDRTK--EKKFITVAFPYTNSPLHIGHGRTYITADIYARYLRMKGYNVLF 72
Query: 131 PFGFHCTGMPIKACADKLKREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKA 190
PF F TG PI + AD +KR E
Sbjct: 73 PFAFQFTGTPILSIADAVKRGDEE------------------------------------ 96
Query: 191 VAKAGSAKYQWQIMQSLGLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFIT 250
+ + YQ I G+ I KF+D S+ +F ++G+ +D RR F T
Sbjct: 97 IISTFTNVYQIPI----GV----ISKFSDPSYLSAYFKEDMRNTALTLGLSIDRRREFTT 148
Query: 251 TDSNPFFDSFVRWQFMRLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGEGVGPQEYTLI 310
D P F+ FV+WQ+ RL++ IK K
Sbjct: 149 ID--PAFERFVQWQYKRLQEIGYIKKEKA------------------------------- 175
Query: 311 KMRLVKPYPAKLCCLDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPVFLV 370
P C +D PV + T + P++ + + + + +
Sbjct: 176 --------PVAYCPVDEFPVGM-----------HDTRGDIEPEIIDLDVIYFQGEKLLFL 216
Query: 371 AATLRPETMYGQTNAWVRPDMAY-IAFTTATGEVFVCTERSARNMAYQ-GFTEVEGKIN- 427
AT RPET++G + PD Y I G+ V + + + +++Q TE E K
Sbjct: 217 TATSRPETIFGAVAILINPDSDYSIVVDNKNGKRLVMSTEAFKKLSFQMSLTEEERKKGG 276
Query: 428 --VLLRLTGQVCIR-------------SGDECVVALCDQ---WYLDYGE--------PTW 461
+ L +T V ++ G V+A+ YL E P
Sbjct: 277 ELIGLNVTNPVTLKKLTVLPSKYVESKQGTGVVMAVPAHEPLHYLALSELKESFEIVPVI 336
Query: 462 KA------AAEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLP-WDEQWLIE 514
K+ A + L T + +++ +L + + S + +P + +Q++ E
Sbjct: 337 KSEDYGDFPAMEVLETAQTTSAQELKDYIDTLYRIEFHKGSIRDEVVDLVPDYMKQFVGE 396
Query: 515 SLSDSTIYMAYYTVAHLLQ-----GGTFRGENGNALNIKAEDLTPEVWD---YVFFKSAP 566
++ ++ A +V LL+ G + NG ++ +V+D ++ + ++
Sbjct: 397 RIAGKSVREARSSVVELLRNLGVHGNIYEIINGPVYCRCGAEVVVKVFDDQWFIDYSNST 456
Query: 567 FPPKCRVPKAKLDIM----RREFQYWY----PVDLRCSGKVSTKLPWDEQWLIESLSDST 618
+ K++I+ +RE P S + +LPWD++ +I+SLSDST
Sbjct: 457 WKSSVLKSLDKIEILPQDAKREISKIIFNMKPRPFTRSRGLGVRLPWDDRQIIDSLSDST 516
Query: 619 IYMAYYTVAH 628
IY +Y VA+
Sbjct: 517 IYTVFYIVAN 526
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 1209 GKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKK 1268
G+DL+QNH+ +++Y H + G++ P+ I NG + + KMSKS GN L +A+++
Sbjct: 584 GRDLVQNHIPYYLYHHVGVLGEDK--VPKRIVLNGFIRVGGKKMSKSFGNVYPLNKAIRE 641
Query: 1269 FSADGMRLCLADSGDSVEDANFVESMADAAVKKFSADGMRLCLADSGDSVEDANFVESMA 1328
+ D +RL L + +D F ++A + ++ L D +E+ ++S+
Sbjct: 642 YGVDTVRLALTSTSSLSDDIEFSPNIAKSIGEQ---------LKHIHDFIENLIKLQSVN 692
Query: 1329 DAGILRLYTFIEWVKEILATQSTLRTGSQDSFNDKVFLSEMNLKIKETEDHYTKMLFKEA 1388
+ + L W+ +++ L LS ++L+ A
Sbjct: 693 EIRKVDL-----WISSLISEYIDLIDNC---------LSNLDLRT--------------A 724
Query: 1389 LRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALLLCPVCPHVAEHV 1440
+T ++++ Y EL G ++ ++ + V L+ P PH+AE +
Sbjct: 725 YKTIYYDIYEDLKDYLEL--GNGKINSDIIKNVISVWIRLMAPFTPHLAEEL 774
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 729 DIIGVALKAPVTSHSVIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKK 781
++IG+ + PVT + LP + +GTG+V +VP+ P Y AL +LK+
Sbjct: 277 ELIGLNVTNPVTLKKLT-VLPSKYVESKQGTGVVMAVPAHEPLHYLALSELKE 328
>sp|Q9HK31|SYL_THEAC Leucine--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC 25905
/ DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=leuS
PE=3 SV=1
Length = 910
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 22/199 (11%)
Query: 794 EMCVVALCDQWYLDYGEPTWKAAAEQCLANMNTYHDEVRRN-FGASLNWLHEYACSRTYG 852
++ V L DQW+LDY +P W + N T H EV RN +++WL E C+R G
Sbjct: 434 KVIVAVLPDQWFLDYSQP-WLKDLGHTMINTMTMHPEVYRNVMNDAIDWLKERPCARRRG 492
Query: 853 LGTKLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYV 912
LGT+LP+D++W+IESLSDSTIY A YT + L+ G+ L + +
Sbjct: 493 LGTRLPFDDRWVIESLSDSTIYPAVYTNSIPLRSLYETGK-----------LDDDAITRI 541
Query: 913 FFKAAPFPPKCRVPKAKLDIMRREFQYWYPVDLRCSGKDLIQNHLTFFIYIHTAIWGDEP 972
F P +R+F+YWYPVD+R + I NHL+F++ H AI+
Sbjct: 542 FMNGEP-------KNEDESEAKRQFEYWYPVDIRLTAIPHISNHLSFYVLNHAAIF--PK 592
Query: 973 EMWPRGIRANGHLLLNSAK 991
E WP G+ +G ++ N AK
Sbjct: 593 EKWPAGLIISGLVVSNGAK 611
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 60/275 (21%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
KF T P+PY NG LH+GH + + + R+ R + VLFP GFH +G PI A ++++
Sbjct: 42 KFMITVPWPYTNGSLHVGHGRTYTLGDIIARYKRSRNYNVLFPMGFHQSGTPILAFSERI 101
Query: 149 KREMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSLG 208
+ G +S + ++ G
Sbjct: 102 R----------------------------------AGDRS-------TIDLYTSYLKEYG 120
Query: 209 LEDDE--IRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFM 266
+D + I F D + D+F + D + +G +DW R F + D F+ FV+WQF
Sbjct: 121 EKDIDALIESFKDPKNIADYFSNAIINDFKHLGYSIDWTRRFTSADE--FYQKFVQWQFR 178
Query: 267 RLRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGE--GVGPQEYTLIKMRLVKPYPAKLCC 324
RL ++ +K G+ ++S D+ + D G+ V +EYT I R
Sbjct: 179 RLNEKGLVKQGRYPILYSLEDDNAVGEDDIKDGDTDKVTIEEYTAIFFR----------- 227
Query: 325 LDSKPVFLVAATLRPETMYGQTNAWVRPDMAYIAL 359
K L+AA+LRPET+YG TN WV PD+ Y+ +
Sbjct: 228 --GKSFDLIAASLRPETIYGITNIWVNPDVKYVKV 260
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 92/193 (47%), Gaps = 22/193 (11%)
Query: 407 TERSARNMAYQGFTEVEGKINVLLRLTGQVCIRSGDECVVA-LCDQWYLDYGEPTWKAAA 465
T R AR + G + RSG + +VA L DQW+LDY +P W
Sbjct: 399 TVREAREAVKRDLIS-SGNAFTFYETSRHAVTRSGSKVIVAVLPDQWFLDYSQP-WLKDL 456
Query: 466 EQCLANMNTYHDEVRRN-FGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSDSTIYMA 524
+ N T H EV RN +++WL E C+R GLGT+LP+D++W+IESLSDSTIY A
Sbjct: 457 GHTMINTMTMHPEVYRNVMNDAIDWLKERPCARRRGLGTRLPFDDRWVIESLSDSTIYPA 516
Query: 525 YYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKSAPFPPKCRVPKAKLDIMRRE 584
YT + L+ G+ L + +F P +R+
Sbjct: 517 VYTNSIPLRSLYETGK-----------LDDDAITRIFMNGEP-------KNEDESEAKRQ 558
Query: 585 FQYWYPVDLRCSG 597
F+YWYPVD+R +
Sbjct: 559 FEYWYPVDIRLTA 571
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 1010 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSAD 1069
I NHL+F++ H AI+ E WP G+ +G ++ N AK+SKS+GN ++L E KK+SAD
Sbjct: 575 ISNHLSFYVLNHAAIF--PKEKWPAGLIISGLVVSNGAKISKSKGNVVSLLEIAKKYSAD 632
Query: 1070 GMRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQD-SFNDKV 1128
RL +A D + S D L + E + + + D +F +
Sbjct: 633 IYRLYVAVQAD-------ISSTMDWNETDLASITRRFNEFKDLMAGFKQDTSDLTFEEAW 685
Query: 1129 FLSEMNLKIKETEDHYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVE- 1187
F++ ++++++ + + ++A F+ + R L++ G ++R L +
Sbjct: 686 FVARFSVRLRQFMESMDRYQIRDAYINIFY---GVLNDLRYLSSRGGDVNRALTPVIADW 742
Query: 1188 VQALLLCPVCPHVAEHVYQ 1206
++AL+ PV PH AE +
Sbjct: 743 LRALM--PVIPHHAEEYWH 759
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 1213 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSAD 1272
I NHL+F++ H AI+ E WP G+ +G ++ N AK+SKS+GN ++L E KK+SAD
Sbjct: 575 ISNHLSFYVLNHAAIF--PKEKWPAGLIISGLVVSNGAKISKSKGNVVSLLEIAKKYSAD 632
Query: 1273 GMRLCLADSGDSVEDANFVESMADAAVKKFS--ADGMRLCLADSGD-SVEDANFVESMAD 1329
RL +A D ++ E+ + ++F+ D M D+ D + E+A FV +
Sbjct: 633 IYRLYVAVQADISSTMDWNETDLASITRRFNEFKDLMAGFKQDTSDLTFEEAWFVARFS- 691
Query: 1330 AGILRLYTFIE 1340
+RL F+E
Sbjct: 692 ---VRLRQFME 699
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYT 625
+ T+LP+D++W+IESLSDSTIY A YT
Sbjct: 493 LGTRLPFDDRWVIESLSDSTIYPAVYT 519
>sp|Q97AN8|SYL_THEVO Leucine--tRNA ligase OS=Thermoplasma volcanium (strain ATCC 51530 /
DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=leuS PE=3
SV=1
Length = 910
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 64/308 (20%)
Query: 685 NDKDKLQEAKELVYLKGFYDGIML-VGEFKGKKVQEVKKLLQKKIDIIGVALKAPVTSHS 743
N K+ L EA + +Y FY G ++ GE+ G V++ ++ ++K D+IG + +
Sbjct: 367 NSKEGLDEATKELYKSEFYYGKLVNSGEYTGLTVRDAREKIKK--DLIG-------SGKA 417
Query: 744 VIYTLPMLSIREDKGTGIVTSVPSDSPDDYAALVDLKKKPPFREKYHVTDEMCVVALCDQ 803
+I+ G+ ++ +V L DQ
Sbjct: 418 IIFYETSRKAVTRGGSKVIVAV----------------------------------LPDQ 443
Query: 804 WYLDYGEPTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQW 863
W++DY K + L M Y + R +++WL E C+R GLGTKLP+D++W
Sbjct: 444 WFIDYSADWLKKLSHDMLNRMMIYPEMYRNVMNDAIDWLKERPCARRRGLGTKLPFDDRW 503
Query: 864 LIESLSDSTIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKAAPFPPKC 923
+IESLSDSTIY A YT + ++ ENG E+ ++D
Sbjct: 504 VIESLSDSTIYPAVYTTSIQMRKLY---ENGKL----DENAIERIFD-----------GG 545
Query: 924 RVPKAKLDIMRREFQYWYPVDLRCSGKDLIQNHLTFFIYIHTAIWGDEPEMWPRGIRANG 983
V + R EF YWYPVD+R + I NHL+F++ H AI+ PE WP G+ +G
Sbjct: 546 EVQNDEERTARNEFSYWYPVDIRLTAVPHISNHLSFYVMNHAAIF--PPEKWPSGLIISG 603
Query: 984 HLLLNSAK 991
++ N AK
Sbjct: 604 LVVSNGAK 611
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 58/282 (20%)
Query: 89 KFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACADKL 148
KF T P+PY NG LH+GH + + + R+ R + VLFP GFH +G PI A ++++
Sbjct: 42 KFMITVPWPYTNGSLHVGHGRTYTLGDIIARYKRSRNYNVLFPMGFHQSGTPILAFSERI 101
Query: 149 KR-EMESFGFPPQFPSEDTEPQTDKDDDDPVIKDKSKGKKSKAVAKAGSAKYQWQIMQSL 207
+ + + + SE E D W
Sbjct: 102 RAGDASTIALYRSYLSEYGEKDID----------------------------GW------ 127
Query: 208 GLEDDEIRKFADASHWLDHFPPLAVQDLRSIGIHVDWRRTFITTDSNPFFDSFVRWQFMR 267
+ KF D + D+F + D + +G +DW R F + D F+ + V+WQF +
Sbjct: 128 ------LEKFKDPRNIADYFSNAIINDFKHLGYSIDWTRKFTSADE--FYQNVVKWQFHK 179
Query: 268 LRDRHKIKYGKRYTVFSPRDNQPCMDHDRASGE--GVGPQEYTLIKMRLVKPYPAKLCCL 325
L ++ IK K ++S D+ + D G+ V +EYT +
Sbjct: 180 LNEKGLIKQDKYPILYSIDDDNAVGEDDIKDGDTDKVSVEEYTAV-------------FF 226
Query: 326 DSKPVFLVAATLRPETMYGQTNAWVRPDMAYIALSCLDSKPV 367
+S L+AA+LRPET++G TN W+ P Y+ + D V
Sbjct: 227 ESNSYSLIAASLRPETLFGVTNIWINPTGEYVKIKIGDKIAV 268
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 94/199 (47%), Gaps = 20/199 (10%)
Query: 400 TGEVFVCTERSARNMAYQGFTEVEGKINVLLRLTGQVCIRSGDECVVA-LCDQWYLDYGE 458
+GE T R AR + GK + + + R G + +VA L DQW++DY
Sbjct: 392 SGEYTGLTVRDAREKIKKDLIG-SGKAIIFYETSRKAVTRGGSKVIVAVLPDQWFIDYSA 450
Query: 459 PTWKAAAEQCLANMNTYHDEVRRNFGASLNWLHEYACSRTYGLGTKLPWDEQWLIESLSD 518
K + L M Y + R +++WL E C+R GLGTKLP+D++W+IESLSD
Sbjct: 451 DWLKKLSHDMLNRMMIYPEMYRNVMNDAIDWLKERPCARRRGLGTKLPFDDRWVIESLSD 510
Query: 519 STIYMAYYTVAHLLQGGTFRGENGNALNIKAEDLTPEVWDYVFFKSAPFPPKCRVPKAKL 578
STIY A YT + ++ ENG E+ ++D V +
Sbjct: 511 STIYPAVYTTSIQMRKLY---ENGKL----DENAIERIFD-----------GGEVQNDEE 552
Query: 579 DIMRREFQYWYPVDLRCSG 597
R EF YWYPVD+R +
Sbjct: 553 RTARNEFSYWYPVDIRLTA 571
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 1213 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSAD 1272
I NHL+F++ H AI+ PE WP G+ +G ++ N AK+SKS+GN ++L E KK+SAD
Sbjct: 575 ISNHLSFYVMNHAAIF--PPEKWPSGLIISGLVVSNGAKISKSKGNVVSLLEITKKYSAD 632
Query: 1273 GMRLCLADSGDSVEDANFVESMADAAVKKFS 1303
RL +A D ++ E+ V++F+
Sbjct: 633 IYRLYVAVQADVSSTMDWNENDLSNIVRRFN 663
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 1010 IQNHLTFFIYIHTAIWGDEPEMWPRGIRANGHLLLNSAKMSKSEGNFLTLTEAVKKFSAD 1069
I NHL+F++ H AI+ PE WP G+ +G ++ N AK+SKS+GN ++L E KK+SAD
Sbjct: 575 ISNHLSFYVMNHAAIF--PPEKWPSGLIISGLVVSNGAKISKSKGNVVSLLEITKKYSAD 632
Query: 1070 GMRLCLADSGDSVEDANFVESMADAGILRLYTFIEWVKEILATQSTLRTGSQD-SFNDKV 1128
RL +A D V S D L + E + + + + +F +
Sbjct: 633 IYRLYVAVQAD-------VSSTMDWNENDLSNIVRRFNEFKTIMDSFKPDTSELNFEETW 685
Query: 1129 FLSEMNLKIKETEDHYTKMLFKEALRTGFF----ELQAARDKYRELTAAEGGMHRTLVLR 1184
F+S ++K+ D ++A F+ +L+ A ++ G +
Sbjct: 686 FVSRFAERLKQFMDQMDGFQIRDAYINIFYGTLNDLKYAVNR--------GASQNRSLAS 737
Query: 1185 FVEVQALLLCPVCPHVAEHVYQ 1206
+ L PV H AE +
Sbjct: 738 IIADWLRALMPVISHHAEEYWH 759
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 25/29 (86%)
Query: 599 VSTKLPWDEQWLIESLSDSTIYMAYYTVA 627
+ TKLP+D++W+IESLSDSTIY A YT +
Sbjct: 493 LGTKLPFDDRWVIESLSDSTIYPAVYTTS 521
>sp|A8GVS7|SYV_RICB8 Valine--tRNA ligase OS=Rickettsia bellii (strain OSU 85-389)
GN=valS PE=3 SV=1
Length = 812
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 87 DDKFFTTFPFPYMNGRLHLGHTFSLSKCEFSVRFNRLKGKRVLFPFGFHCTGMPIKACAD 146
D+ F P P ++G+LH+GH +S ++ +F VRF R+ GK + +P GF G+P + +
Sbjct: 36 DETFVVDTPPPTVSGQLHIGHVYSYTQTDFIVRFQRMMGKNIFYPMGFDDNGLPTERLVE 95
Query: 147 KLKREMESFGF 157
K +R+++++
Sbjct: 96 K-QRQVKAYNM 105
Score = 38.5 bits (88), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 1452 HYTKMLFKEALRTGFFELQAARDKYRELTAAEGGMHRTLVLRFVEVQALL--LCPVCPHV 1509
H T+ F + E+ R Y E G + +++ + +Q LL P PH+
Sbjct: 652 HLTEKFFWSVFCDNYLEISKTR-AYDEENKNPSGQYSSVLTLYHVMQTLLKLFAPFMPHI 710
Query: 1510 AEHVYQLLGKKGSI-VKARWPEGGPIDDILVRSSSYLMEAAHAFR-LQVKNHI 1560
E +YQ+L + SI +K W G ++ Y ++A R L++ +H+
Sbjct: 711 TEELYQILYSENSIHIKGNWINYGNLN--------YKIDAKQPERLLEILDHV 755
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 625,451,877
Number of Sequences: 539616
Number of extensions: 27483292
Number of successful extensions: 74465
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 609
Number of HSP's that attempted gapping in prelim test: 62964
Number of HSP's gapped (non-prelim): 11110
length of query: 1618
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1487
effective length of database: 120,879,763
effective search space: 179748207581
effective search space used: 179748207581
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)