RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy531
(80 letters)
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily,
immune system; HET: NAG; 3.00A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Length = 201
Score = 36.1 bits (83), Expect = 3e-04
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 41 VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+H+T + E +CG + + + W+K
Sbjct: 2 IHVTKEVKEVATLSCGHNVSVEELAQTRIYWQK 34
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region
plasiticity, cell adhesion; HET: PG6; 2.50A {Homo
sapiens} PDB: 3alp_A* 3u82_B 3sku_E* 2l7j_A
Length = 331
Score = 36.3 bits (83), Expect = 3e-04
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ +G VV +C P + + W+K
Sbjct: 23 SMYGFIGTDVVLHCSFANPLPSVKITQVTWQK 54
Score = 24.3 bits (52), Expect = 4.9
Identities = 7/37 (18%), Positives = 8/37 (21%), Gaps = 3/37 (8%)
Query: 37 ISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
I L V C D + P W
Sbjct: 236 IEGFDGNWYLQRMDVKLTCKAD--AN-PPATEYHWTT 269
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex,
beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo
sapiens}
Length = 339
Score = 34.7 bits (79), Expect = 0.001
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 15 HHISLQVLLIITLVHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQW 71
++I+ + L I + P I + I+A LG + C V TP+ +L W
Sbjct: 208 YNITRSIELRI-KKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWW 264
Score = 24.3 bits (52), Expect = 6.3
Identities = 8/36 (22%), Positives = 10/36 (27%), Gaps = 5/36 (13%)
Query: 42 HITALLGESVVFNCGVDFPGD----TPVPYVLQWEK 73
L GE V C +P + W K
Sbjct: 27 REFRLEGEPVALRCPQVPYWLWASVSPRINL-TWHK 61
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain,
cell adhesion, cell junction, glycoprotein,
immunoglobulin domain, membrane; HET: NAG FUC; 2.19A
{Mus musculus} PDB: 3mj7_A* 3mj9_A*
Length = 268
Score = 34.1 bits (77), Expect = 0.002
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
+ +GESV+ C V + V V W K++
Sbjct: 15 LRVHVGESVLMGCVVQRTEEKHVDRV-DWLFSKDKDDA 51
Score = 25.2 bits (54), Expect = 2.7
Identities = 3/33 (9%), Positives = 10/33 (30%), Gaps = 1/33 (3%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+ +G++ C + + + W
Sbjct: 127 DLRVRVGDTTQMRCSIQ-STEEKRVTKVNWMFS 158
>1nn8_R CD155 antigen, poliovirus receptor; icosahedral virus,
picornavirus, virus/receptor complex; 15.00A {Homo
sapiens} SCOP: i.6.1.1 PDB: 1dgi_R
Length = 302
Score = 33.1 bits (75), Expect = 0.004
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVP-YVLQWEK 73
+ LG+SV C + P L W +
Sbjct: 9 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWAR 41
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3;
immunoglobulin, VCBP, V-type, V SET, immune system;
1.85A {Branchiostoma floridae}
Length = 250
Score = 33.0 bits (74), Expect = 0.004
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G +V C DT P + W K
Sbjct: 12 VEVHAGGTVELPCSYQLANDTQPPVI-SWLK 41
Score = 25.3 bits (54), Expect = 2.2
Identities = 5/32 (15%), Positives = 7/32 (21%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G + C D V W
Sbjct: 145 VVQVDEGNDITMTCPCT---DCANANV-TWYT 172
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell
adhesion comple adhesion; HET: NAG; 2.30A {Homo
sapiens}
Length = 201
Score = 32.5 bits (74), Expect = 0.006
Identities = 6/31 (19%), Positives = 10/31 (32%), Gaps = 2/31 (6%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G+ +V C P P +W
Sbjct: 18 VRVKEGKGMVLLCDP--PYHFPDDLSYRWLL 46
Score = 27.9 bits (62), Expect = 0.28
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 18 SLQVLLIITLVHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
L+ I K DI + AL+G++V C G+ PVP + +W K
Sbjct: 97 KFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFAL--GN-PVPDI-RWRK 149
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell
adhesion molecule, immunoglobuline superfamily,
alternative splicing, cell adhesion; 2.19A {Mus
musculus} PDB: 3mj7_B* 2npl_X
Length = 214
Score = 32.3 bits (73), Expect = 0.006
Identities = 7/37 (18%), Positives = 11/37 (29%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKN 78
I GE+ C + P ++W N
Sbjct: 9 RIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDN 45
Score = 27.0 bits (59), Expect = 0.52
Identities = 7/46 (15%), Positives = 12/46 (26%), Gaps = 5/46 (10%)
Query: 28 VHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V K V + +G C + +W+K
Sbjct: 118 VLVKPSGTRCF--VDGSEEIGNDFKLKCEPK--EGSLPLQF-EWQK 158
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG
B3P; 2.60A {Homo sapiens}
Length = 304
Score = 32.5 bits (74), Expect = 0.006
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 28 VHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V + V+P S + + G +V C G P+PYV +W +
Sbjct: 199 VRVQNVAPRFSILPMSHEIMPGGNVNITCVAV--GS-PMPYV-KWMQ 241
Score = 26.7 bits (59), Expect = 0.72
Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G F C GD P P V W K
Sbjct: 15 DQIGVSGGVASFVCQAT--GD-PKPRV-TWNK 42
Score = 26.3 bits (58), Expect = 1.0
Identities = 12/63 (19%), Positives = 16/63 (25%), Gaps = 8/63 (12%)
Query: 12 TNLHHISLQVLLIITLVHFKGVSPDISNAVH-ITALLGESVVFNCGVDFPGDTPVPYVLQ 70
H L VL P+I + C G+ P P +
Sbjct: 89 EITVHAKLTVL---REDQLPSGFPNIDMGPQLKVVERTRTATMLCAAS--GN-PDPEI-T 141
Query: 71 WEK 73
W K
Sbjct: 142 WFK 144
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage
capsid decorative protein, interaction with bacteria;
1.95A {Enterobacteria phage RB49}
Length = 304
Score = 32.1 bits (72), Expect = 0.008
Identities = 7/42 (16%), Positives = 12/42 (28%), Gaps = 1/42 (2%)
Query: 33 VSPDIS-NAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
++ +S + L G+ V P W K
Sbjct: 1 MAFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTK 42
Score = 29.0 bits (64), Expect = 0.11
Identities = 9/53 (16%), Positives = 15/53 (28%), Gaps = 4/53 (7%)
Query: 25 ITLVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVL----QWEK 73
+ L+ + +I+ H V + V F G W K
Sbjct: 84 VFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSK 136
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain,
vegfr-2, growth factor receptor, VEGF LI
hormone-signaling protein complex, angiogenesis; 3.20A
{Homo sapiens} PDB: 3v6b_R
Length = 772
Score = 32.0 bits (72), Expect = 0.009
Identities = 12/63 (19%), Positives = 19/63 (30%)
Query: 18 SLQVLLIITLVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVK 77
+ V + F D V+IT ++VV C EK+ V
Sbjct: 113 VIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVP 172
Query: 78 NNK 80
+
Sbjct: 173 DGN 175
Score = 25.5 bits (55), Expect = 2.4
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
I +GE +V NC + V WE K+
Sbjct: 234 IELSVGEKLVLNCTAR--TELNVGIDFNWEYPSSKHQH 269
Score = 25.1 bits (54), Expect = 3.2
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T +GES+ +C G+ P P + W K
Sbjct: 676 QTTSIGESIEVSCTAS--GN-PPPQI-MWFK 702
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex,
beta trefoil, IG domain, growth factor/growth factor
receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4
b.1.1.4
Length = 334
Score = 31.5 bits (71), Expect = 0.014
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G++V +C PG P+ W K
Sbjct: 17 QLVFGSGDAVELSCPP--PGGGPMGPT-VWVK 45
Score = 29.2 bits (65), Expect = 0.10
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
TA+LG V F+C V D P++ QW K + N
Sbjct: 232 QTAVLGSDVEFHCKVY--SD-AQPHI-QWLKHVEVNGS 265
Score = 24.2 bits (52), Expect = 6.0
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Query: 33 VSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
P+ + + +V F C G+ P P + W K
Sbjct: 123 TRPERMDKKLLAVPAANTVRFRCPAA--GN-PTP-SISWLK 159
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune
system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A
4f8q_A
Length = 226
Score = 31.6 bits (71), Expect = 0.016
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
I A++GE C + P + L+W
Sbjct: 13 PILAMVGEDADLPCHLF-PTMSAETMELKWVSS 44
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like
protein 3, nephrin- like 2, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Length = 122
Score = 31.0 bits (70), Expect = 0.016
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 33 VSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
P IS+ AL GE C + P P + W K
Sbjct: 13 GPPIISSTQTQHALHGEKGQIKCFIR--ST-PPPDRIAWSWK 51
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein
receptor, immunoglobulin V domain fold, symmetric
dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A
2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B
1p69_B 1p6a_B
Length = 126
Score = 31.0 bits (70), Expect = 0.019
Identities = 9/52 (17%), Positives = 16/52 (30%), Gaps = 7/52 (13%)
Query: 36 DISNAVH-------ITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
D + ++ I GE+ C + P ++W N K
Sbjct: 1 DFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQK 52
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth
factor-receptor complex, receptor tyrosine kinase, CY
4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus
musculus}
Length = 289
Score = 31.1 bits (70), Expect = 0.023
Identities = 7/63 (11%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Query: 12 TNLHHISLQVLLIITLVHFKGVSPDIS-NAVHITALLGESVVFNCGVDFPGDTPVPYVLQ 70
S + + + P I + + GE+ C + V + +
Sbjct: 164 MVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSAT---NAEVGFNVI 220
Query: 71 WEK 73
++
Sbjct: 221 LKR 223
Score = 26.4 bits (58), Expect = 0.81
Identities = 5/32 (15%), Positives = 12/32 (37%), Gaps = 3/32 (9%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+T + G+ V C + P + + +
Sbjct: 98 EVTVVEGQEAVLPCLITDP---ALKDSVSLMR 126
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix
bundle cytokine, receptor tyrosine kinase glycosylation;
HET: NAG BMA; 3.00A {Homo sapiens}
Length = 292
Score = 30.7 bits (69), Expect = 0.027
Identities = 5/63 (7%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Query: 12 TNLHHISLQVLLIITLVHFKGVSPDIS-NAVHITALLGESVVFNCGVDFPGDTPVPYVLQ 70
+ + + + + P ++ + + GE+ C V + +
Sbjct: 164 LMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSAS---SVDVNFDVF 220
Query: 71 WEK 73
+
Sbjct: 221 LQH 223
Score = 24.5 bits (53), Expect = 4.5
Identities = 2/33 (6%), Positives = 9/33 (27%), Gaps = 3/33 (9%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+ + + C + D + + +
Sbjct: 98 EVVVFEDQDALLPCLL---TDPVLEAGVSLVRV 127
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system;
1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E
3csp_A 1py9_A
Length = 139
Score = 30.3 bits (68), Expect = 0.035
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
I AL+G+ C + PG + W +
Sbjct: 15 PIRALVGDEAELPCRIS-PGKNATGMEVGWYRS 46
>2y25_A Myomesin; structural protein, sarcomere, M-BAND,
immunoglobulin-like D; 3.50A {Homo sapiens}
Length = 317
Score = 30.3 bits (68), Expect = 0.045
Identities = 6/41 (14%), Positives = 11/41 (26%), Gaps = 3/41 (7%)
Query: 33 VSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
P + +V+ C V ++ W K
Sbjct: 6 TGPHFVEYLSWEVTGECNVLLKCKVA--NIKKETHI-VWYK 43
Score = 25.6 bits (56), Expect = 1.7
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+T G+++ C V GD P P V W K
Sbjct: 232 VTIQEGKALNLTCNVW--GD-PPPEV-SWLK 258
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling
protein complex, angiogenesis, glycoprotein, HOST-virus
interaction, membrane; HET: NAG BMA; 2.70A {Homo
sapiens} PDB: 2x1x_R*
Length = 213
Score = 30.1 bits (67), Expect = 0.046
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 16 HISLQVLLIITLVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEKKI 75
+ S+ ++++ V S+ + ++ +GE +V NC + V WE
Sbjct: 90 YQSIMYIVVVVGYRIYDVVLSPSHGIELS--VGEKLVLNCTAR--TELNVGIDFNWEYPS 145
Query: 76 VKNNK 80
K+
Sbjct: 146 SKHQH 150
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling
protein/receptor, growth regulation/complex, vitamin
K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Length = 195
Score = 29.9 bits (67), Expect = 0.047
Identities = 8/42 (19%), Positives = 10/42 (23%), Gaps = 4/42 (9%)
Query: 33 VSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
P T +C G P P L W +
Sbjct: 105 GLPYFLEEPEDRTVAANTPFNLSCQAQ--GP-PEPVDLLWLQ 143
Score = 28.7 bits (64), Expect = 0.15
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
IT G + C + G+ P + W +
Sbjct: 12 ITGARGLTGTLRCQLQVQGEPP---EVHWLR 39
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor
tyrosine kinase, growth factor cytoki dimerization,
transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Length = 524
Score = 30.0 bits (67), Expect = 0.048
Identities = 7/52 (13%), Positives = 13/52 (25%), Gaps = 5/52 (9%)
Query: 24 IITLVHFKGVSPDI--SNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
I V + + + GE C + D W++
Sbjct: 200 FILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIK---DVSSSVYSTWKR 248
Score = 26.9 bits (59), Expect = 0.66
Identities = 7/31 (22%), Positives = 10/31 (32%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ GE+V + P P QW
Sbjct: 323 VFVNDGENVDLIVEYE---AFPKPEHQQWIY 350
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative
splicing, cell adhesion, cell membrane, glycoprotein,
HOST-virus interaction; 3.50A {Homo sapiens} PDB:
3uro_R 3epc_R* 3epd_R* 3epf_R*
Length = 221
Score = 29.7 bits (66), Expect = 0.067
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVP-YVLQWEKK 74
+ LG+SV C + P L W +
Sbjct: 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARH 41
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane,
phosphorylation, immunoglobulin domain, membrane,
glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Length = 192
Score = 29.4 bits (66), Expect = 0.067
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 14/59 (23%)
Query: 15 HHISLQVLLIITLVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
LQV V P I + T V C + G+ P+P + W++
Sbjct: 86 KQAFLQVF----------VQPHIIQLKNETTYENGQVTLVCDAE--GE-PIPEI-TWKR 130
Score = 27.1 bits (60), Expect = 0.56
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 41 VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ TA GE + F+C G P P + W +
Sbjct: 12 FNATAERGEEMTFSCRAS--GS-PEPAI-SWFR 40
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain,
cytokine decoy RE virus/viral protein, type-1
interferon, soluble A/B-IFNR; HET: EPE; 2.10A
{Ectromelia virus}
Length = 329
Score = 29.8 bits (66), Expect = 0.067
Identities = 9/59 (15%), Positives = 19/59 (32%)
Query: 15 HHISLQVLLIITLVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ I + I+T++ + + I +GE C ++ WE
Sbjct: 210 NDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWEN 268
Score = 25.9 bits (56), Expect = 1.3
Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
+ A LGE C D+ + + + +V K
Sbjct: 38 NDMAALGEPFSAKCPP--IEDSLLSHRYNDKDNVVNWEK 74
>2ch8_A BARF1, P33, 33 kDa early protein; viral protein, immunoglobulin
domain, oncogene; HET: NAG MAN; 2.3A {Epstein-barr
virus}
Length = 201
Score = 29.2 bits (65), Expect = 0.078
Identities = 10/31 (32%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+TA LGE V P V W K
Sbjct: 1 VTAFLGERVTLTSYWRRVSLGPEIEV-SWFK 30
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed
death-1 ligand 1, complex, costimulatory, immune
system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Length = 222
Score = 29.6 bits (66), Expect = 0.079
Identities = 4/33 (12%), Positives = 10/33 (30%), Gaps = 1/33 (3%)
Query: 43 ITALLGESVVFNCGVDFPGDTPV-PYVLQWEKK 74
G ++ C + ++ WE +
Sbjct: 11 YVVEYGSNMTIECKFPVEKQLDLAALIVYWEME 43
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation,
phosphorylation, disease MU neuronal development,
immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens}
PDB: 2v9q_A
Length = 212
Score = 29.4 bits (66), Expect = 0.079
Identities = 10/47 (21%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Query: 28 VHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ + D + +GE V C P P P + W+K
Sbjct: 105 LEVAILRDDFRQNPSDVMVAVGEPAVMECQP--PRGHPEPTI-SWKK 148
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif,
immunoglobulin-like domain, growth facto factor
receptor, extracellular; 2.10A {Homo sapiens} PDB:
1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E
1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Length = 231
Score = 29.1 bits (65), Expect = 0.089
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNN 79
+ ++G V F C V D P++ QW K + KN
Sbjct: 128 ASTVVGGDVEFVCKVY--SD-AQPHI-QWIKHVEKNG 160
Score = 24.9 bits (54), Expect = 3.8
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+V F C G+ P+P + +W K
Sbjct: 29 HAVPAANTVKFRCPAG--GN-PMPTM-RWLK 55
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin
superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus
norvegicus}
Length = 403
Score = 29.4 bits (66), Expect = 0.094
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G +V+ NC + D VP + +W+K
Sbjct: 31 AVTMRGGNVLLNCSAE--SDRGVPVI-KWKK 58
Score = 27.1 bits (60), Expect = 0.50
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
ITA +G++V+ C V G P+P + W+K
Sbjct: 130 SITAFMGDTVLLKCEV--IG-DPMPTI-HWQK 157
Score = 27.1 bits (60), Expect = 0.56
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
++ A+ G+ V C V G P P W +
Sbjct: 230 NVIAIEGKDAVLECCVS--GY-PPPSF-TWLR 257
Score = 26.3 bits (58), Expect = 0.98
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 5/42 (11%)
Query: 33 VSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V P N ++ A + F C V G PVP + W K
Sbjct: 311 VPPWFLNHPSNLYAYESMDIEFECAVS--GK-PVP-TVNWMK 348
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus
gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB:
2om5_A
Length = 382
Score = 29.1 bits (65), Expect = 0.12
Identities = 11/54 (20%), Positives = 14/54 (25%), Gaps = 8/54 (14%)
Query: 21 VLLIITLVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
L L F D + G V+F C P P +W
Sbjct: 94 SLRFGFLQEFSAEERD-----PVKITEGWGVMFTCSP--PPHYPALSY-RWLLN 139
Score = 26.0 bits (57), Expect = 1.3
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
AL G+ V C G+ PVP + +W K
Sbjct: 216 DTYALTGQMVTLECFAF--GN-PVPQI-KWRK 243
Score = 24.4 bits (53), Expect = 5.2
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
A +G + ++C G P P V +W +
Sbjct: 304 TEADIGSDLRWSCVAS--GK-PRPAV-RWLR 330
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond,
glycoprotein, immunoglobulin membrane, transmembrane;
HET: NAG; 2.21A {Mus musculus}
Length = 108
Score = 28.3 bits (63), Expect = 0.12
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Query: 31 KGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
KG ++T + G + + C VD +T + QW
Sbjct: 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSL----QWSN 42
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein
complex, receptor tyrosine kinas binding, immunoglobulin
domain, kinase, membrane, nucleotid binding; HET: NAG;
2.10A {Homo sapiens}
Length = 241
Score = 28.8 bits (64), Expect = 0.13
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
TA+LG V F+C V D P++ QW K + N
Sbjct: 124 QTAVLGSDVEFHCKVY--SD-AQPHI-QWLKHVEVNGS 157
Score = 26.1 bits (57), Expect = 1.3
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Query: 33 VSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
P+ + + +V F C G+ P P + W K
Sbjct: 15 TRPERMDKKLLAVPAANTVRFRCPAA--GN-PTPSI-SWLK 51
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin
fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP:
b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Length = 191
Score = 28.6 bits (64), Expect = 0.15
Identities = 9/32 (28%), Positives = 11/32 (34%), Gaps = 3/32 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+GES F C V GD + W
Sbjct: 12 GEISVGESKFFLCQV--AGDAKDKDI-SWFSP 40
Score = 27.9 bits (62), Expect = 0.28
Identities = 10/43 (23%), Positives = 12/43 (27%), Gaps = 5/43 (11%)
Query: 33 VSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
NA GE V C V P + W+ K
Sbjct: 99 QKLMFKNAPTPQEFKEGEDAVIVCDVV--SS-LPPTI-IWKHK 137
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A*
1qa9_A
Length = 182
Score = 28.7 bits (64), Expect = 0.16
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 36 DISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+I+NA+ LG+ + + F + + +WEK
Sbjct: 2 EITNALETWGALGQDINLDIP-SFQMSDDIDDI-KWEKT 38
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules,
NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4
b.1.1.4 PDB: 1ie5_A
Length = 291
Score = 28.7 bits (64), Expect = 0.17
Identities = 7/32 (21%), Positives = 9/32 (28%), Gaps = 3/32 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+GES F C V + W
Sbjct: 12 GEISVGESKFFLCQVA---GDAKDKDISWFSP 40
Score = 26.0 bits (57), Expect = 1.1
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 28 VHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V+ + V+ TA LG+SV C D G P P + W K
Sbjct: 191 VNVPPTVQARQSIVNATANLGQSVTLVCDAD--GF-PEPTM-SWTK 232
Score = 24.5 bits (53), Expect = 5.2
Identities = 7/31 (22%), Positives = 9/31 (29%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
GE V C V P + W+
Sbjct: 110 QEFKEGEDAVIVCDVV--SS-LPPTI-IWKH 136
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet,
STRU genomics, berkeley structural genomics center,
BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Length = 137
Score = 28.1 bits (62), Expect = 0.18
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+G SV +C G PVP + QW +
Sbjct: 31 QQRWVGGSVELHCEAV--GS-PVPEI-QWWFE 58
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30,
N-terminal eight IG domains...; immunoglobulin domain;
HET: NAG NDG; 4.19A {Drosophila melanogaster}
Length = 816
Score = 28.4 bits (63), Expect = 0.21
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 35 PDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
P I + GE+++ C V G P+ + WE+
Sbjct: 528 PYIRQMEKKAIVAGETLIVTCPVA--GY-PIDSI-VWER 562
Score = 27.6 bits (61), Expect = 0.44
Identities = 9/43 (20%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 32 GVSPDISNAVH-ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V+ V+ + G S V C + V V+ W
Sbjct: 136 VVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVE-VVSWHT 177
Score = 26.8 bits (59), Expect = 0.82
Identities = 9/31 (29%), Positives = 10/31 (32%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
G C D G P P V W+K
Sbjct: 724 KAFAQGSDAKVECKAD--GF-PKPQV-TWKK 750
Score = 26.1 bits (57), Expect = 1.2
Identities = 6/33 (18%), Positives = 12/33 (36%), Gaps = 3/33 (9%)
Query: 41 VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
A +G+ + +C V +P + W
Sbjct: 627 EEGPAQVGQYLTLHCSVP---GGDLPLNIDWTL 656
Score = 23.7 bits (51), Expect = 7.9
Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T G VF C G P+ V W K
Sbjct: 352 TQTVDFGRPAVFTCQYT--G-NPIKTV-SWMK 379
>2ens_A Advanced glycosylation END product-specific receptor;
beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 96
Score = 27.8 bits (62), Expect = 0.21
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
G +V C V P P P + W K
Sbjct: 20 GAVAPGGTVTLTCEV--PAQ-PSPQI-HWMK 46
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1,
BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 99
Score = 27.7 bits (62), Expect = 0.21
Identities = 7/43 (16%), Positives = 12/43 (27%), Gaps = 6/43 (13%)
Query: 32 GVSPDISNAV-HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
G S V G+ + C + D + W +
Sbjct: 1 GSSGSSGVEVESFLVHPGDLLQLRCRLR--DDVQ---SINWLR 38
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein;
1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Length = 284
Score = 28.2 bits (63), Expect = 0.23
Identities = 10/42 (23%), Positives = 12/42 (28%), Gaps = 5/42 (11%)
Query: 33 VSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
P + L G V C + G P V W K
Sbjct: 191 EPPVFRKKPHPVETLKGADVHLECELQ--GT-PPFQV-SWHK 228
Score = 27.8 bits (62), Expect = 0.32
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ LGES F C V G + W K
Sbjct: 15 VDLALGESGTFKCHVT--GT-APIKI-TWAK 41
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor,
adhesion, structural genomics, NEW YORK STR genomics
research consortium, nysgrc; 1.70A {Homo sapiens} PDB:
3rq3_A 3udw_A* 3ucr_A
Length = 117
Score = 27.6 bits (61), Expect = 0.23
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+I+A G S++ C + V V WE++
Sbjct: 12 NISAEKGGSIILQCHLSST-TAQVTQV-NWEQQ 42
>2pnd_A V-SET and immunoglobulin domain containing 4; complement
receptor, IG-like domain, immune system; 1.00A {Mus
musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Length = 119
Score = 27.6 bits (61), Expect = 0.24
Identities = 7/40 (17%), Positives = 13/40 (32%), Gaps = 1/40 (2%)
Query: 35 PDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
P + +T V C D P +++W +
Sbjct: 3 PTLKTPESVTGTWKGDVKIQCIYD-PLRGYRQVLVKWLVR 41
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural
genomics, PSI-biology, NEW YORK struc genomics research
consortium, nysgrc; 2.30A {Homo sapiens}
Length = 124
Score = 27.7 bits (61), Expect = 0.26
Identities = 6/33 (18%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
IT G+++ C ++ + QW
Sbjct: 10 TITVEEGQTLTLKCVTSLRKNSSL----QWLTP 38
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor
tyrosine kinase, class III, recep ligand complex,
cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A
{Mus musculus}
Length = 290
Score = 27.8 bits (61), Expect = 0.28
Identities = 9/60 (15%), Positives = 15/60 (25%), Gaps = 6/60 (10%)
Query: 15 HHISLQVLLIITLVHFKGVSPDIS-NAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
S + L + P +S G++ C + D W K
Sbjct: 171 WLHSDKFTLKVREAI--KAIPVVSVPETSHLLKKGDTFTVVCTI---KDVSTSVNSMWLK 225
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human
coxsackievirus A21, cryo-electron
microscopy,virus-receptor complex, icosahedral virus;
HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3
b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Length = 450
Score = 27.9 bits (61), Expect = 0.28
Identities = 8/37 (21%), Positives = 12/37 (32%), Gaps = 4/37 (10%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNN 79
+ G SV+ C P +L E + K
Sbjct: 9 VILPRGGSVLVTCST----SCDQPMLLGIETPLPKKE 41
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane,
transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo
sapiens}
Length = 291
Score = 27.9 bits (62), Expect = 0.29
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 10/65 (15%)
Query: 12 TNLHHISLQVLLIITLVHFKGVSPDISNA---VHITALLGESVVFNCGVDFPGDTPVPYV 68
+ II +V+ V P IS + TA GE + F+C G P P +
Sbjct: 173 RVEARGEIDFRDIIVIVN---VPPAISMPQKSFNATAERGEEMTFSCRAS--GS-PEPAI 226
Query: 69 LQWEK 73
W +
Sbjct: 227 -SWFR 230
Score = 24.8 bits (54), Expect = 3.7
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 5/33 (15%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+ +GES F C G+ P W
Sbjct: 13 KVELSVGESKFFTCTAI--GE-PESID--WYNP 40
Score = 24.4 bits (53), Expect = 5.0
Identities = 8/31 (25%), Positives = 8/31 (25%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
GE C V P P V W
Sbjct: 108 QEFKQGEDAEVVCRVS--SS-PAPAV-SWLY 134
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily.,
cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Length = 231
Score = 27.8 bits (61), Expect = 0.29
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ + G+SV+ +C D Y+L+W
Sbjct: 10 VEVMRGKSVILDCTPTGTHD---HYMLEWFL 37
>3owc_A Probable acetyltransferase; structural genomics, PSI-2, protein
structure initiative, MI center for structural genomics,
MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa}
Length = 188
Score = 27.8 bits (62), Expect = 0.29
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 1 MGMWLNLAFLETNLHHISLQVL 22
+ L AF + ++ + L V
Sbjct: 115 LEALLAEAFADADIERVELNVY 136
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody,
immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S
3cm9_S 3chn_J 3cm9_J
Length = 585
Score = 28.0 bits (61), Expect = 0.31
Identities = 5/31 (16%), Positives = 9/31 (29%), Gaps = 1/31 (3%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ ++ G SV C W +
Sbjct: 10 VNSVEGNSVSITCYYPPTSVNR-HTRKYWCR 39
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune
system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Length = 110
Score = 27.5 bits (61), Expect = 0.31
Identities = 6/35 (17%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 41 VHITALLGESVVFNCGVDFPGDTPV-PYVLQWEKK 74
+ I A E+ C + + V+ W+ +
Sbjct: 2 LKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQ 36
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin
domain, fibronectin type III repeat, CE adhesion; 1.80A
{Homo sapiens}
Length = 215
Score = 27.5 bits (61), Expect = 0.33
Identities = 8/39 (20%), Positives = 12/39 (30%), Gaps = 4/39 (10%)
Query: 35 PDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
P + V + G V C V P + W +
Sbjct: 20 PKLQGPVAVYTWEGNQVNITCEVF--AY-PSATI-SWFR 54
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system;
3.00A {Homo sapiens}
Length = 193
Score = 27.6 bits (61), Expect = 0.34
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ +LGESV +FP V ++ W
Sbjct: 8 VNGILGESVTLPL--EFPAGEKVNFI-TWLF 35
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo
sapiens} PDB: 3p40_A*
Length = 404
Score = 27.5 bits (61), Expect = 0.36
Identities = 8/52 (15%), Positives = 14/52 (26%), Gaps = 8/52 (15%)
Query: 22 LLIITLVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
L + + + D + G + C P P P + W
Sbjct: 110 LQVSKSPLWPKENLD-----PVVVQEGAPLTLQCNP--PPGLPSPVI-FWMS 153
Score = 24.8 bits (54), Expect = 3.1
Identities = 8/32 (25%), Positives = 11/32 (34%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
L G ++ C G P P + W K
Sbjct: 231 SQMVLRGMDLLLECIAS--GV-PTPDI-AWYK 258
Score = 24.1 bits (52), Expect = 6.0
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ GE C + G+ P P V QW
Sbjct: 322 LILAPGEDGRLVCRAN--GN-PKPTV-QWMV 348
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical
bundle cytokine, hematopoietic cytokine-receptor
complex, cell surface, EXTR complex; 7.80A {Homo
sapiens}
Length = 527
Score = 27.7 bits (61), Expect = 0.40
Identities = 6/46 (13%), Positives = 11/46 (23%), Gaps = 4/46 (8%)
Query: 28 VHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ KG +++ E F+ P W
Sbjct: 321 IVEKGFINATNSSEDYEIDQYEEFCFSVRFK--AY-PQIRC-TWTF 362
Score = 26.2 bits (57), Expect = 1.0
Identities = 7/42 (16%), Positives = 11/42 (26%), Gaps = 4/42 (9%)
Query: 33 VSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
S + A + + S+ VD W K
Sbjct: 48 SSGTVYEAAAVEVDVSASITLQVLVD---APGNISC-LWVFK 85
Score = 24.3 bits (52), Expect = 5.7
Identities = 5/31 (16%), Positives = 9/31 (29%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ +GE + C + WE
Sbjct: 237 LFLKVGEPLWIRCKA--VHVNHGFGL-TWEL 264
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling
protein,transferase; 2.21A {Rattus norvegicus}
Length = 192
Score = 27.4 bits (61), Expect = 0.40
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 33 VSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ P I+ +++ + G V C G+ P P V W K
Sbjct: 99 MKPKITRPPINVKIIEGLKAVLPCTTM--GN-PKPSV-SWIK 136
Score = 27.0 bits (60), Expect = 0.48
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ AL+ E F C V+ P P + W +
Sbjct: 16 TVDALVEEVATFMCAVE--SY-PQPEI-SWTR 43
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 27.5 bits (60), Expect = 0.40
Identities = 7/25 (28%), Positives = 9/25 (36%), Gaps = 4/25 (16%)
Query: 54 NCGVDFPGDTPVPY-VLQ--WEKKI 75
V FP +P +L W I
Sbjct: 377 RLSV-FPPSAHIPTILLSLIWFDVI 400
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB:
2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Length = 212
Score = 27.5 bits (61), Expect = 0.41
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T + G F C GD P P + W K
Sbjct: 16 QTGVSGGVASFICQAT--GD-PRPKI-VWNK 42
Score = 25.9 bits (57), Expect = 1.4
Identities = 9/53 (16%), Positives = 14/53 (26%), Gaps = 5/53 (9%)
Query: 22 LLIITLVHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
L ++ P I + C G+ P P + W K
Sbjct: 96 LTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAAS--GN-PDPEI-TWFK 144
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-
like; 2.50A {Homo sapiens}
Length = 312
Score = 27.3 bits (60), Expect = 0.42
Identities = 6/43 (13%), Positives = 12/43 (27%), Gaps = 3/43 (6%)
Query: 31 KGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ P + +V+ C V + + W K
Sbjct: 219 RKQGPHFVEYLSWEVTGECNVLLKCKVA---NIKKETHIVWYK 258
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A
2f8v_A
Length = 194
Score = 27.4 bits (61), Expect = 0.45
Identities = 10/47 (21%), Positives = 16/47 (34%), Gaps = 5/47 (10%)
Query: 28 VHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V + P+ +T G V V G P P V ++ +
Sbjct: 97 VKAETAPPNFVQRLQSMTVRQGSQVRLQVRVT--GI-PTPVV-KFYR 139
Score = 26.6 bits (59), Expect = 0.72
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ L G + F + G PVP V W +
Sbjct: 15 VVVLEGSTATFEAHIS--GF-PVPEV-SWFR 41
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2,
angiogenesis, ATP-binding, developmental protein,
differentiation, glycoprotein; 2.70A {Homo sapiens}
Length = 108
Score = 26.9 bits (60), Expect = 0.47
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T +GES+ +C G+ P P + W K
Sbjct: 20 QTTSIGESIEVSCTAS--GN-PPPQI-MWFK 46
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular
adhesion, ligand-independent DIME mutational analysis,
transferase; HET: EPE; 1.96A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.4
Length = 182
Score = 27.1 bits (60), Expect = 0.52
Identities = 5/32 (15%), Positives = 9/32 (28%), Gaps = 3/32 (9%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ +C G P P + W +
Sbjct: 107 DLAVPPNAPFQLSCEAV--GP-PEPVTIVWWR 135
Score = 26.3 bits (58), Expect = 0.97
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 41 VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V +T G+ V NC V+ G P + QW K
Sbjct: 10 VKLTVSQGQPVKLNCSVE--G-MEEPDI-QWVK 38
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor
protein tyrosine phosphatase; HET: NAG; 2.00A {Mus
musculus} PDB: 3jxa_A*
Length = 384
Score = 27.1 bits (60), Expect = 0.53
Identities = 6/31 (19%), Positives = 11/31 (35%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
++ G+ +V CG P + W
Sbjct: 112 VSVRRGQGMVLLCGP--PPHSGELSY-AWIF 139
Score = 25.9 bits (57), Expect = 1.2
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+ A G +V C G+ PVP + W +
Sbjct: 214 TVPAEKGTTVKLECFAL--GN-PVPTI-LWRRA 242
Score = 23.6 bits (51), Expect = 9.3
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
I + ESV + C + G P P +W K
Sbjct: 305 IHVAMEESVFWECKAN--GR-PKPTY-RWLK 331
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane,
glycoprotein, signal, complex (immunoglobulin/receptor);
2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB:
1ira_Y* 4dep_B* 1g0y_R
Length = 315
Score = 27.0 bits (59), Expect = 0.54
Identities = 5/32 (15%), Positives = 8/32 (25%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ LG + C V W+
Sbjct: 218 TMEVDLGSQIQLICNVTG---QLSDIA-YWKW 245
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL
structural protein; 3.30A {Oryctolagus cuniculus}
Length = 570
Score = 27.1 bits (60), Expect = 0.58
Identities = 13/47 (27%), Positives = 16/47 (34%), Gaps = 5/47 (10%)
Query: 28 VHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ V P V + LGES F C V G + W K
Sbjct: 191 LSEHEVPPFFDLKPVSVDLALGESGTFKCHVT--GT-APIKI-TWAK 233
Score = 26.7 bits (59), Expect = 0.92
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
I+ ++GE V ++ G V W K
Sbjct: 486 DISTVVGEEVQLQATIE--GA-EPISV-AWFK 513
Score = 24.0 bits (52), Expect = 7.3
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Query: 28 VHFKGVSPDISNAVH-ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ + + P + + + LG V F C + G + V W K
Sbjct: 95 IKERKLPPSFARKLKDVHETLGFPVAFECRI--NG-SEPLQV-SWYK 137
Score = 23.6 bits (51), Expect = 9.6
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
H+ A +GE + C VD G P + W K
Sbjct: 14 HVEAAIGEPITLQCKVD--GT-PEIRI-AWYK 41
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A
{Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4
b.1.1.4
Length = 395
Score = 27.2 bits (60), Expect = 0.58
Identities = 4/31 (12%), Positives = 8/31 (25%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ V C ++ W+K
Sbjct: 16 VLFRENNPTVLECIIE---GNDQGVKYSWKK 43
Score = 26.4 bits (58), Expect = 0.92
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 4/44 (9%)
Query: 31 KGVSPDISNAVH-ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
K H T + G +C + P P P + W+K
Sbjct: 97 KTYLIASPAKTHEKTPIEGRPFQLDCVL--PNAYPKPLI-TWKK 137
Score = 26.0 bits (57), Expect = 1.1
Identities = 6/32 (18%), Positives = 12/32 (37%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ A G+ + C + P+ Y + K
Sbjct: 221 DMMAKAGDVTMIYCMYG--SN-PMGYP-NYFK 248
Score = 24.9 bits (54), Expect = 3.1
Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
I G+ V C V G P P V W
Sbjct: 318 VIVVKQGQDVTIPCKVT--GL-PAPNV-VWSH 345
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell
adhesion protein, immunoglobulin fold, I-SET fold, cell
adhesion glycoprotein; 1.9A {Homo sapiens} SCOP:
b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Length = 210
Score = 26.8 bits (58), Expect = 0.60
Identities = 7/31 (22%), Positives = 9/31 (29%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ LG S C + V QW
Sbjct: 17 VAVALGASRQLTCRLA--CADRGASV-QWRG 44
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein
1, isoform 2; hydrolase, immunoglobulin domain,
nucleus, protease; 2.80A {Homo sapiens}
Length = 218
Score = 26.8 bits (59), Expect = 0.62
Identities = 9/32 (28%), Positives = 10/32 (31%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
L G+ V C G P QW K
Sbjct: 27 SKAVLAGQFVKLCCRAT--GH-PFVQY-QWFK 54
Score = 26.8 bits (59), Expect = 0.70
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Query: 44 TALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G ++V C G P+P+ QW K
Sbjct: 129 KLMPGSTLVLQCVAV--GS-PIPHY-QWFK 154
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 104
Score = 26.6 bits (59), Expect = 0.63
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ L GES F C + ++ W
Sbjct: 18 MEVLEGESCSFECVL--SHESASDPA-MWTV 45
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex,
alternative splicing, ATP-binding, calcium,
calmodulin-binding, cardiomyopathy; 1.30A {Homo
sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Length = 107
Score = 26.6 bits (59), Expect = 0.63
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ + G C V G+ P P V WEK
Sbjct: 23 VRVVSGAEAELKCVVL--GE-PPPVV-VWEK 49
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR,
VEGF receptor, cancer, immune system-transfer complex;
HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Length = 122
Score = 26.6 bits (58), Expect = 0.68
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
I +GE +V NC + V WE K+
Sbjct: 17 GIELSVGEKLVLNCTAR--TELNVGIDFNWEYPSSKHQH 53
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 104
Score = 26.2 bits (58), Expect = 0.69
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 5/31 (16%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+T E VV C + D P W K
Sbjct: 20 LTFTTSERVVLTCELSRV-DFPA----TWYK 45
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell
adhesion, immunoglobulin domain; 3.2A {Drosophila
melanogaster} PDB: 2vra_A*
Length = 217
Score = 26.8 bits (59), Expect = 0.72
Identities = 10/47 (21%), Positives = 15/47 (31%), Gaps = 4/47 (8%)
Query: 28 VHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ + D GE+ + CG P P P + W K
Sbjct: 102 LQIAVLRDDFRVEPKDTRVAKGETALLECGP--PKGIPEPTL-IWIK 145
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P
structural and functional analyses, riken structural
genomics/proteomics initiative; NMR {Homo sapiens}
Length = 113
Score = 26.2 bits (58), Expect = 0.72
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 6/31 (19%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
A G + V C + PV +W K
Sbjct: 29 EEATEGATAVLRCELS--KMAPV----EWWK 53
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction
immunology, IGSF, cell SU receptor signalling,
glycosylation, membrane protein; HET: NAG; 2.90A {Homo
sapiens}
Length = 118
Score = 26.3 bits (58), Expect = 0.73
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYV-LQWEKK 74
+ LG+SV C + P L W +
Sbjct: 9 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARH 42
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil,
immunoglobulin, immune system, extracellular; HET: NAG;
3.10A {Homo sapiens} PDB: 3o4o_B*
Length = 349
Score = 26.8 bits (58), Expect = 0.80
Identities = 5/45 (11%), Positives = 8/45 (17%), Gaps = 7/45 (15%)
Query: 42 HITALLGESVVFNCGVD-------FPGDTPVPYVLQWEKKIVKNN 79
I E C + + L W +
Sbjct: 16 QIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRD 60
Score = 24.1 bits (51), Expect = 5.9
Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Query: 15 HHISLQVLLIITLVHFKGVSPDI---SNAVHITALLGESVVFNCGVDFPGDTPVPYVLQW 71
H++ + + + V P I ++ V GE ++ C V F + W
Sbjct: 205 FHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWW 264
Query: 72 EK 73
Sbjct: 265 TI 266
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core
protein; immunoglobulin-like domain, extracellular
matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Length = 98
Score = 25.9 bits (57), Expect = 0.81
Identities = 6/31 (19%), Positives = 10/31 (32%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G V F C +P + W +
Sbjct: 20 QSVRPGADVTFICTAK--SKSPAYTL-VWTR 47
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain,
immunoglobulin fold, alternative splicing, signal,
muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB:
1ncu_A 1tnm_A 1tnn_A
Length = 106
Score = 26.2 bits (58), Expect = 0.82
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 12/54 (22%)
Query: 28 VHFK-------GVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+H ++ I +T GES F+C D G+ PVP V W +
Sbjct: 1 MHHHHHHSSKTTLAARILTKPRSMTVYEGESARFSCDTD--GE-PVPTV-TWLR 50
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein,
immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG;
2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB:
1p9m_C 2arw_A
Length = 325
Score = 26.7 bits (58), Expect = 0.83
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+T+L G+SV C P D + W
Sbjct: 16 LTSLPGDSVTLTCPGVEPEDNA---TVHWVL 43
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein;
2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Length = 154
Score = 26.4 bits (58), Expect = 0.84
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ + G + F+C V+ G P P V W K
Sbjct: 50 DMEVVEGSAARFDCKVE--GY-PDPEV-MWFK 77
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted
in U twenty twenty, neurogenesis, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 26.3 bits (58), Expect = 0.86
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T + + V +C G PVP + W K
Sbjct: 18 QTVAVDGTFVLSCVAT--GS-PVPTI-LWRK 44
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein
3; structural genomics, joint center for struct
genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Length = 112
Score = 26.2 bits (57), Expect = 0.89
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 3/38 (7%)
Query: 35 PDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQW 71
P I+ +A+ G V F C + P W
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAA--SSSDSPMTFAW 46
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell
adhesion, transmembrane, disulfide bond, alternative
splicing; HET: NAG; 1.95A {Rattus norvegicus}
Length = 190
Score = 26.4 bits (58), Expect = 0.90
Identities = 5/32 (15%), Positives = 8/32 (25%), Gaps = 4/32 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYV-LQWEK 73
I V C + + + W K
Sbjct: 13 IIRDSLLPVTLQCNLT---SSSHTLMYSYWTK 41
Score = 25.2 bits (55), Expect = 2.2
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 5/42 (11%)
Query: 33 VSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+PDI+ G+ + C G P P W K
Sbjct: 91 AAPDITGHKRSENKNEGQDAMMYCKSV--GY-PHPEW-MWRK 128
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac
muscle, hypertrophic cardiomyopathy, actin-binding,
cell adhesion, disease mutation; NMR {Homo sapiens}
Length = 95
Score = 25.8 bits (57), Expect = 1.0
Identities = 5/31 (16%), Positives = 10/31 (32%), Gaps = 5/31 (16%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G VF + V +W++
Sbjct: 18 VEVAAGSPAVFEAETERA-GVKV----RWQR 43
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate
binding, immune system; HET: SIA GAL GLC; 1.85A {Mus
musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A*
1qfp_A 2bve_A* 1url_A*
Length = 119
Score = 26.0 bits (57), Expect = 1.0
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 42 HITALLGESVVFNCGVDFPGDTPV--PYVLQWEKK 74
++ L G ++ C +P D PV W
Sbjct: 9 NVQGLSGSCLLIPCIFSYPADVPVSNGITAIWYYD 43
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein,
serine/threonine-protein KI LIMB-girdle muscular
dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB:
2j8o_A 2ill_A
Length = 197
Score = 26.2 bits (58), Expect = 1.1
Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 5/43 (11%)
Query: 32 GVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
++P ++ + C V G P P V +W +
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVT--G-HPKPIV-KWYR 40
Score = 23.9 bits (52), Expect = 7.0
Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 7/64 (10%)
Query: 12 TNLH-HISLQVLLIITLVHFKGVSPDISNAV-HITALLGESVVFNCGVDFPGDTPVPYVL 69
TN +S L + V K P + + AL GE V G P P +
Sbjct: 82 TNQGGSVSGTASLEV-EVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFS--G-KPDPVI- 136
Query: 70 QWEK 73
W+K
Sbjct: 137 TWQK 140
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation,
immunoglobulin domain, membrane, glycoprote adhesion,
transmembrane; HET: NAG; 2.00A {Homo sapiens}
Length = 189
Score = 26.3 bits (58), Expect = 1.1
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 10/65 (15%)
Query: 12 TNLHHISLQVLLIITLVHFKGVSPDISNA---VHITALLGESVVFNCGVDFPGDTPVPYV 68
+ II +V+ V P IS + TA GE + F+C G +P P +
Sbjct: 77 RVEARGEIDFRDIIVIVN---VPPAISMPQKSFNATAERGEEMTFSCRAS--G-SPEPAI 130
Query: 69 LQWEK 73
W +
Sbjct: 131 -SWFR 134
Score = 24.0 bits (52), Expect = 6.5
Identities = 8/31 (25%), Positives = 8/31 (25%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
GE C V P P V W
Sbjct: 12 QEFKQGEDAEVVCRVS--SS-PAPAV-SWLY 38
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 100
Score = 25.8 bits (57), Expect = 1.1
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T + + + C GD P+P + W K
Sbjct: 18 QTLAVDGTALLKCKAT--GD-PLPVI-SWLK 44
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin,
actin-associated scaffold, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 110
Score = 25.8 bits (57), Expect = 1.1
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 5/44 (11%)
Query: 31 KGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
G P A +T G+ +C V G P P + W+
Sbjct: 6 SGFRPHFLQAPGDLTVQEGKLCRMDCKVS--GL-PTPDL-SWQL 45
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion,
membrane, development protein; HET: NAG; 1.95A
{Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Length = 388
Score = 26.1 bits (57), Expect = 1.1
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 6/64 (9%)
Query: 12 TNLHHISLQVLLIITLVHFKGVSPDISNAVH--ITALLGESVVFNCGVDFPGDTPVPYVL 69
T +S ++ +P V + ++ ++ C G P P
Sbjct: 189 TGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQ--GF-PAPSF- 244
Query: 70 QWEK 73
+W K
Sbjct: 245 RWYK 248
Score = 26.1 bits (57), Expect = 1.3
Identities = 9/43 (20%), Positives = 13/43 (30%), Gaps = 2/43 (4%)
Query: 32 GVSPDISNAVH-ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V+ V+ + G S V C + V V W
Sbjct: 101 VVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVV-SWHT 142
Score = 24.5 bits (53), Expect = 3.9
Identities = 10/32 (31%), Positives = 12/32 (37%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T G VF C G+ P+ V W K
Sbjct: 316 TQTVDFGRPAVFTCQYT--GN-PIKTV-SWMK 343
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell
immunoglobulin mucin, signaling protein; 1.95A {Mus
musculus} PDB: 3kaa_A*
Length = 109
Score = 25.7 bits (56), Expect = 1.1
Identities = 5/39 (12%), Positives = 12/39 (30%), Gaps = 1/39 (2%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
+G++ C P + + W K ++
Sbjct: 3 GYKVEVGKNAYLPCSYTLPTSGTLVPM-CWGKGFCPWSQ 40
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A
{Homo sapiens}
Length = 207
Score = 26.1 bits (57), Expect = 1.2
Identities = 6/45 (13%), Positives = 12/45 (26%), Gaps = 3/45 (6%)
Query: 29 HFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ P + +V+ C V + + W K
Sbjct: 112 WIRKQGPHFVEYLSWEVTGECNVLLKCKVA---NIKKETHIVWYK 153
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 110
Score = 25.8 bits (57), Expect = 1.2
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 4/32 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
H G V F C V G+ P P + W K
Sbjct: 17 HYKIFEGMPVTFTCRVA--GN-PKPKI-YWFK 44
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1;
immunoglobulin superfamily, integrin-binding, cell
adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3
b.1.1.4 PDB: 1ij9_A 1vsc_A
Length = 202
Score = 25.9 bits (56), Expect = 1.2
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 4/33 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKKI 75
A +G+SV C P W +I
Sbjct: 11 YLAQIGDSVSLTCSTT---GCESP-FFSWRTQI 39
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 115
Score = 25.8 bits (57), Expect = 1.3
Identities = 6/31 (19%), Positives = 8/31 (25%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G S F C + V W
Sbjct: 23 VDVQEGSSATFRCRIS---PANYEPV-HWFL 49
>1neu_A Myelin P0 protein; structural protein, glycoprotein,
transmembrane, phosphorylation, immunoglobulin fold,
signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Length = 124
Score = 25.7 bits (56), Expect = 1.3
Identities = 4/33 (12%), Positives = 8/33 (24%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+ +G V +C W +
Sbjct: 8 EVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQ 40
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein
1 (isoform 2); hydrolase, immunoglobulin domain,
nucleus, protease; 1.15A {Homo sapiens}
Length = 91
Score = 25.4 bits (56), Expect = 1.3
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 44 TALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G ++V C G +P+P+ QW K
Sbjct: 14 KLMPGSTLVLQCVAV--G-SPIPHY-QWFK 39
>1f97_A Junction adhesion molecule; immunoglobulin superfamily,
beta-sandwich fold, cell adhesion; 2.50A {Mus musculus}
SCOP: b.1.1.1 b.1.1.4
Length = 212
Score = 26.1 bits (57), Expect = 1.3
Identities = 7/32 (21%), Positives = 11/32 (34%), Gaps = 4/32 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
+ ES+ C G P V +W+
Sbjct: 11 VQVPENESIKLTCTYS--G-FSSPRV-EWKFV 38
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation,
immunoglobulin domain, IG, membrane, homphilic,
glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB:
2xy2_A* 2vaj_A
Length = 189
Score = 25.9 bits (57), Expect = 1.3
Identities = 8/42 (19%), Positives = 8/42 (19%), Gaps = 5/42 (11%)
Query: 33 VSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
GE C V P P V W
Sbjct: 95 QKLTFREVVSPQEFKQGEDAEVVCRVS--SS-PAPAV-SWLY 132
Score = 25.5 bits (56), Expect = 1.9
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ +GES F C G+ P +
Sbjct: 12 VELSVGESKFFTCTAI--GE-PESID-WYNP 38
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498;
beta-sandwich, IG-fold, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 102
Score = 25.4 bits (56), Expect = 1.3
Identities = 11/46 (23%), Positives = 13/46 (28%), Gaps = 8/46 (17%)
Query: 28 VHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V F P + A G S +C V V W K
Sbjct: 9 VVFAKEQPAHRE---VQAEAGASATLSCEV----AQAQTEV-TWYK 46
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing,
ATP-binding, calcium, calmodulin-binding,
cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A
2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Length = 100
Score = 25.4 bits (56), Expect = 1.4
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 5/43 (11%)
Query: 32 GVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
G+ P I I+ G+ + C G+ P P V W
Sbjct: 3 GIPPKIEALPSDISIDEGKVLTVACAFT--GE-PTPEV-TWSC 41
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW-
type/skeletal muscle SLOW-isoform, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Length = 103
Score = 25.4 bits (56), Expect = 1.4
Identities = 11/31 (35%), Positives = 12/31 (38%), Gaps = 5/31 (16%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
TA GE V C V D V +W K
Sbjct: 17 TTAYCGERVELECEVSED-DANV----KWFK 42
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Length = 305
Score = 25.9 bits (57), Expect = 1.5
Identities = 7/43 (16%), Positives = 14/43 (32%), Gaps = 5/43 (11%)
Query: 32 GVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
++P ++ + C V P P V +W +
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVT---GHPKPIV-KWYR 40
Score = 25.5 bits (56), Expect = 1.9
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Query: 33 VSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ + + AL GE V G P P + W+K
Sbjct: 104 LPKTLEGMGAVHALRGEVVSIKIPFS--GK-PDPVI-TWQK 140
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural
genomics, IG-fold I-SET, RGD motif, homophilic
adhesion, arterial smooth muscle cells; 0.96A {Homo
sapiens}
Length = 99
Score = 25.3 bits (56), Expect = 1.5
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G+ V+ + V G+ P P V W +
Sbjct: 15 QSVREGQDVIMSIRVQ--GE-PKPVV-SWLR 41
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex,
costimulation, glycoprotein, immunoglo domain,
membrane, transmembrane, receptor; 1.60A {Mus musculus}
PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Length = 202
Score = 25.8 bits (56), Expect = 1.6
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 43 ITALLGESVVFNCGVD 58
T +G SV C D
Sbjct: 12 YTVDVGSSVSLECDFD 27
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor,
tight junction formation, immunoglobulin superfamily,
immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1
b.1.1.4 PDB: 3eoy_G
Length = 209
Score = 25.7 bits (56), Expect = 1.6
Identities = 6/31 (19%), Positives = 10/31 (32%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ V +C G P V +W+
Sbjct: 14 VRIPENNPVKLSCAYS--G-FSSPRV-EWKF 40
Score = 24.2 bits (52), Expect = 5.9
Identities = 13/59 (22%), Positives = 17/59 (28%), Gaps = 14/59 (23%)
Query: 16 HISLQVLLIITLVHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ L VL V P + +A +G V C G P W K
Sbjct: 99 KVKLIVL----------VPPSKPTVNIPSSATIGNRAVLTCSEQD-GS-PPSEY-TWFK 144
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI
cardiomyopathy, disease mutation, disulfide bond,
immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Length = 197
Score = 25.4 bits (56), Expect = 1.7
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+T LGE+ +C + G P+P + +W +
Sbjct: 17 VTTKLGEAAQLSCQIV--GR-PLPDI-KWYR 43
Score = 24.7 bits (54), Expect = 3.7
Identities = 6/31 (19%), Positives = 11/31 (35%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+G ++ + G PVP + W
Sbjct: 113 YYGAVGSTLRLHVMYI--GR-PVPAM-TWFH 139
>2v9t_A Roundabout homolog 1; structural protein-receptor complex,
developmental protein, domain, roundabout, chemotaxis,
LRR domain; 1.70A {Homo sapiens}
Length = 117
Score = 25.2 bits (55), Expect = 1.9
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ GE NC + G P P + +W K
Sbjct: 19 LIVSKGEPATLNCKAE--GR-PTPTI-EWYK 45
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 99
Score = 25.0 bits (55), Expect = 2.0
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G+ V C V G PVP + W
Sbjct: 21 CAVIEGQDFVLQCSVR--GT-PVPRI-TWLL 47
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila
melanogaster} PDB: 3pxj_A
Length = 212
Score = 25.5 bits (56), Expect = 2.0
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+G F C GD P P + W K
Sbjct: 16 QGVRVGGVASFYCAAR--GD-PPPSI-VWRK 42
Score = 24.8 bits (54), Expect = 3.2
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Query: 22 LLIITLVHFKGVSPDISNA-VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
L I P I+ +G +V+ C G+ P P + W K
Sbjct: 98 LTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAI--GN-PTPNI-YWIK 146
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex,
costimulation, glycoprotein, immunoglo domain,
membrane, transmembrane, receptor; 1.60A {Mus musculus}
PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Length = 117
Score = 25.0 bits (55), Expect = 2.1
Identities = 6/28 (21%), Positives = 10/28 (35%), Gaps = 3/28 (10%)
Query: 44 TALLGESVVFNCGVDFPGDTPVPYVLQW 71
T G + F C + + +L W
Sbjct: 10 TVSEGANATFTCSLS---NWSEDLMLNW 34
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle
isozymes; IG fold, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: b.1.1.4
Length = 114
Score = 25.0 bits (55), Expect = 2.1
Identities = 8/31 (25%), Positives = 8/31 (25%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
GESV V G W K
Sbjct: 17 QKVRAGESVELFGKVT--GT-QPITC-TWMK 43
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 113
Score = 25.1 bits (55), Expect = 2.1
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Query: 41 VHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
V++ A+ E VV C + P V +W K
Sbjct: 21 VYVAAVRLERVVLTCEL----CRPWAEV-RWTK 48
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain,
immunoglobulin superfamily, transmembrane,
phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A
{Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Length = 389
Score = 25.5 bits (56), Expect = 2.2
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T V C + G+ P+P + W++
Sbjct: 10 ETTYENGQVTLVCDAE--GE-PIPEI-TWKR 36
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 103
Score = 25.0 bits (55), Expect = 2.3
Identities = 7/32 (21%), Positives = 11/32 (34%), Gaps = 5/32 (15%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
++ + VF C + P V W K
Sbjct: 17 NLQVEEKGTAVFTCKT----EHPAATV-TWRK 43
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell,
HLA, major histocompatibility complex class I (MHC class
I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 257
Score = 25.3 bits (55), Expect = 2.3
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Query: 27 LVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWE 72
++ P +S T L GESV +C D Y L E
Sbjct: 100 VITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDM---YHLSRE 142
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion
molecule, virus entry receptor, STR genomics,
PSI-biology; 1.30A {Homo sapiens}
Length = 128
Score = 24.9 bits (54), Expect = 2.6
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
+ LG +V C + P ++ W++ N
Sbjct: 11 EVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANH 49
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein
complex, growth factor-receptor complex, TRA hormone
complex; HET: NDG NAG; 2.30A {Homo sapiens}
Length = 289
Score = 25.0 bits (54), Expect = 2.7
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 25 ITLVHFKGVSPDIS-NAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEKKIVKNNK 80
+ + S ++S NAV GE++ C V G+ V +W ++ +
Sbjct: 172 YYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVI--GNEVV--NFEWTYPRKESGR 224
Score = 23.9 bits (51), Expect = 8.3
Identities = 5/26 (19%), Positives = 9/26 (34%)
Query: 35 PDISNAVHITALLGESVVFNCGVDFP 60
P+ + + I + C V P
Sbjct: 97 PNDAEELFIFLTEITEITIPCRVTDP 122
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation
marker blast-1, BCM1 surface antigen, leukocyte antigen
MEM-102, TCT.1; NMR {Homo sapiens}
Length = 121
Score = 24.9 bits (54), Expect = 2.8
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 3/34 (8%)
Query: 40 AVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
VH+T + G +V N P + L W
Sbjct: 11 LVHMTVVSGSNVTLNISESLPEN---YKQLTWFY 41
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain,
SLOW-type myosin-binding protein C, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 100
Score = 24.6 bits (54), Expect = 2.9
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 6/31 (19%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T LG+ + C + + P +W K
Sbjct: 17 QTVNLGKEICLKCEIS--ENIPG----KWTK 41
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase,
heparin-binding, nucleotide-binding, immunoglobulin
domain, alternatice splicing; NMR {Mus musculus}
Length = 95
Score = 24.4 bits (53), Expect = 2.9
Identities = 4/32 (12%), Positives = 10/32 (31%), Gaps = 5/32 (15%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G+ + C + D + W +
Sbjct: 18 SLLVHPGDLLQLRCRLR--DDVQ---SINWLR 44
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer,
immunoglobul domain, muscle protein, thick filament,
contractIle protein; 2.24A {Homo sapiens}
Length = 212
Score = 24.8 bits (54), Expect = 3.0
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+T G+++ C V GD P P V W K
Sbjct: 127 VTIQEGKALNLTCNVW--GD-PPPEV-SWLK 153
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane,
cytoplasm, cytoskeleton, disease mutation,
immunoglobulin domain; NMR {Homo sapiens}
Length = 116
Score = 24.7 bits (54), Expect = 3.0
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
L G+SV C + P P + W++
Sbjct: 25 KKVLEGDSVKLECQIS--AI-PPPKL-FWKR 51
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold,
transmembrane, MHC lipoprotein, polymorphism; 3.90A
{Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3
PDB: 1wip_A 1wiq_A 3t0e_E
Length = 363
Score = 25.1 bits (54), Expect = 3.3
Identities = 4/31 (12%), Positives = 8/31 (25%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G++V C W+
Sbjct: 4 VLGKKGDTVELTCTAS---QKKSIQF-HWKN 30
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral
protein-immune system compl; HET: NAG SUC; 1.99A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B*
2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C*
3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A
3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Length = 184
Score = 24.6 bits (53), Expect = 3.5
Identities = 4/31 (12%), Positives = 8/31 (25%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ G++V C W+
Sbjct: 5 VLGKKGDTVELTCTAS---QKKSIQF-HWKN 31
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain,
beta-sandwhich, I-SET, structural protein; 2.10A {Homo
sapiens} SCOP: b.1.1.4
Length = 99
Score = 24.2 bits (53), Expect = 4.1
Identities = 9/31 (29%), Positives = 10/31 (32%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T G F V G P P +W K
Sbjct: 15 QTVGQGSDAHFRVRVV--GK-PDPEC-EWYK 41
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical
bundle cytokine, CY receptor complex, extracellular
complex; HET: NAG; 4.30A {Homo sapiens}
Length = 423
Score = 24.6 bits (53), Expect = 4.1
Identities = 7/42 (16%), Positives = 11/42 (26%), Gaps = 4/42 (9%)
Query: 33 VSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEKK 74
S + A + + S+ VD W K
Sbjct: 48 SSGTVYEAAAVEVDVSASITLQVLVD---APGNISC-LWVFK 85
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Length = 171
Score = 24.5 bits (53), Expect = 4.1
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
I ++ +V F+ P + P+ V W+K
Sbjct: 4 QIYGVVYGNVTFHV----PSNVPLKEV-LWKK 30
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2,
structural genomics, NPPSFA; NMR {Mus musculus}
Length = 106
Score = 24.3 bits (53), Expect = 4.3
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 5/31 (16%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+T E VF C V D V +W K
Sbjct: 18 LTVKAAEQAVFKCEV---SDEKVT--GKWYK 43
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states,
actin-binding, cardiomyopathy, cell adhesion, disease
mutation, immunoglobulin domain; 1.30A {Homo sapiens}
PDB: 2v6h_A 2avg_A
Length = 108
Score = 24.2 bits (52), Expect = 4.9
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+G S+ F+ V P V +W K
Sbjct: 14 GEVTVGGSITFSARVAGASLLKPPVV-KWFK 43
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton,
immunoglobulin domain, muscle protein, phosphorylation,
repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A
1tiu_A 2rq8_A
Length = 93
Score = 23.8 bits (52), Expect = 5.2
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 5/31 (16%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ +GE+ F + P D QW+
Sbjct: 15 VEVFVGETAHFEIELSEP-DVHG----QWKL 40
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker,
immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Length = 642
Score = 24.1 bits (52), Expect = 5.8
Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 8/57 (14%)
Query: 17 ISLQVLLIITLVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
S V L + G I + + L G ++ +C + Y W
Sbjct: 547 RSDPVTLDVL----YGPDTPIISPPDSSYLSGANLNLSCHSA--SNPSPQY--SWRI 595
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory
receptor, two-domain structure, V-SET, C2-SET, IG-like
domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo
sapiens} PDB: 2zg3_A* 2zg2_A
Length = 214
Score = 24.0 bits (51), Expect = 6.2
Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Query: 43 ITALLGESVVFNCGVDFPGD---TPVPYVLQWEKK 74
+T G V+ C +P + P + W +
Sbjct: 10 VTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRD 44
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo
sapiens}
Length = 99
Score = 23.8 bits (52), Expect = 6.4
Identities = 7/31 (22%), Positives = 8/31 (25%), Gaps = 4/31 (12%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
T F G+ P P W K
Sbjct: 16 TTVSSDSVAKFAVKAT--GE-PRPTA-IWTK 42
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor,
CD32, immunoglobulin superfamily, low responder
polymorphism, cell membrane; HET: NAG; 1.50A {Homo
sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C*
2fcb_A
Length = 170
Score = 24.0 bits (52), Expect = 6.6
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 9/57 (15%)
Query: 17 ISLQVLLIITLVHFKGVSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+S V L V F+ + H+ GE+++ C D P+ V + +
Sbjct: 75 LSDPVHLT---VLFE---WLVLQTPHLEFQEGETIMLRCHS--WKDKPLVKV-TFFQ 122
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding,
disease MU ectodermal dysplasia, glycoprotein,
heparin-binding, immuno domain, kinase; 1.96A {Homo
sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Length = 100
Score = 23.6 bits (51), Expect = 6.7
Identities = 8/41 (19%), Positives = 14/41 (34%), Gaps = 4/41 (9%)
Query: 33 VSPDISNAVHITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ + +V F C G P+P + +W K
Sbjct: 8 TNTEKMEKRLHAVPAANTVKFRCPAG--G-NPMPTM-RWLK 44
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I
domain, integrin, allosteric mobility, cell adhesi
immune system; HET: NAG; 2.10A {Homo sapiens}
Length = 196
Score = 23.9 bits (51), Expect = 6.9
Identities = 7/31 (22%), Positives = 9/31 (29%), Gaps = 4/31 (12%)
Query: 42 HITALLGESVVFNCGVDFPGDTPVPYVLQWE 72
G S+ NC + P P E
Sbjct: 11 VAFVERGGSLWLNCST----NCPRPERGGLE 37
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces
lactis}
Length = 1236
Score = 23.8 bits (52), Expect = 7.6
Identities = 5/11 (45%), Positives = 7/11 (63%)
Query: 55 CGVDFPGDTPV 65
++F GD PV
Sbjct: 734 GAINFTGDEPV 744
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system;
HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Length = 262
Score = 23.7 bits (51), Expect = 7.6
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
++ E+V +C V P QW
Sbjct: 11 VSVFQEETVTLHCEVL---HLPGSSSTQWFL 38
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta
sandwich, immunoglobulin-like, immune system receptor;
1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A
1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Length = 175
Score = 23.7 bits (51), Expect = 7.9
Identities = 7/31 (22%), Positives = 10/31 (32%), Gaps = 3/31 (9%)
Query: 43 ITALLGESVVFNCGVDFPGDTPVPYVLQWEK 73
+ L +SV C +P QW
Sbjct: 17 YSVLEKDSVTLKCQGA---YSPEDNSTQWFH 44
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.140 0.439
Gapped
Lambda K H
0.267 0.0526 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,252,369
Number of extensions: 59046
Number of successful extensions: 362
Number of sequences better than 10.0: 1
Number of HSP's gapped: 362
Number of HSP's successfully gapped: 210
Length of query: 80
Length of database: 6,701,793
Length adjustment: 49
Effective length of query: 31
Effective length of database: 5,333,664
Effective search space: 165343584
Effective search space used: 165343584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.9 bits)