Diaphorina citri psyllid: psy5312

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120----
MLQCRLTLLVLIIMTVTMLVLDQIQCSPVNTRNNNQIAGHPLSKRSFFDIQCKGVYDKSIFARLDRICEDCYDLFRAPQIHTLCRKDCFTSDYFKGCLEVLRLTDESDSIQADIMQLHGVDPGL
ccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHcccccc
**QCRLTLLVLIIMTVTMLVLDQIQCSPVN***********LSKRSFFDIQCKGVYDKSIFARLDRICEDCYDLFRAPQIHTLCRKDCFTSDYFKGCLEVLRLTDESDSIQADIMQLHGV****
xxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLQCRLTLLVLIIMTVTMLVLDQIQCSPVNTRNNNQIAGHPLSKRSFFDIQCKGVYDKSIFARLDRICEDCYDLFRAPQIHTLCRKDCFTSDYFKGCLEVLRLTDESDSIQADIMQLHGVDPGL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ion transport peptide-like confidentQ26492

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0046331 [BP]lateral inhibitionprobableGO:0032502, GO:0044700, GO:0045165, GO:0048869, GO:0030154, GO:0045168, GO:0008150, GO:0044763, GO:0023052, GO:0007267, GO:0007154, GO:0009987, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1J0T, chain A
Confidence level:very confident
Coverage over the Query: 46-120
View the alignment between query and template
View the model in PyMOL