BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5313
(511 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZKJ0|CLP1L_CHICK Cleft lip and palate transmembrane protein 1-like protein OS=Gallus
gallus GN=CLPTM1L PE=2 SV=1
Length = 536
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/526 (41%), Positives = 325/526 (61%), Gaps = 33/526 (6%)
Query: 3 ILSHISLSKIVISVGLGFMIHSVWSIYKLSLPPDCPV--ERTCLKSSLLRNPKLELILFS 60
+LS S + + + V ++ H+ W +Y + CP C+ L R PKL+L +++
Sbjct: 1 MLSRSSFTSLAVGVFAVYVAHTCWVMYGIVYTRPCPSGGAAACVWPYLARRPKLQLSVYT 60
Query: 61 SVKEKPTGR-DVELILEKKKFDYNQAFEENIKLNVPYKTRMNGTLFLHMFIIAHRPNQNW 119
+ + +++L+L + FD FE + ++VP KTR NGTL+ ++F+ H W
Sbjct: 61 TTRSNIGAESNIDLVLNVEDFDIESKFERTVNVSVPKKTRNNGTLYAYIFL-HHAGVLPW 119
Query: 120 DWDSLARHSNQYEIKVYRKVPLSKYALPPDRTFHLLSEEGPQQKSR---------KPVTH 170
H + +V+ PL+ Y +P +LL+ E Q+ +PV+H
Sbjct: 120 -------HDGK---QVHIVSPLTTYMVPKPEEINLLTGESTTQQIEAEKQTSALDEPVSH 169
Query: 171 IKSLIEFNMLIDVHKFPRLEIPFELYNYFRI----SNNEFLPIVAYNLLNDRNTFLKEVK 226
+S + N++++ F +P +++ Y ++ +LPI+ + L++R L +
Sbjct: 170 WRSRLTLNVMVEDFVFDGSSLPADVHRYMKMVQLGKTVHYLPILFIDQLSNRVKDLMVIN 229
Query: 227 PDTNEMEIQFKYSPISYGKLRLMLHVEASFKSIAQMGFSDKEIDDVKSMFADTHLYVFLT 286
T E+ + Y IS GKLR +H++ + S+ Q GFS+K+ D+VK +F DT+LY
Sbjct: 230 RSTTELPLTVSYDKISLGKLRFWIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLAL 289
Query: 287 TMVVSFVHLLFDFLAFKNDVSFWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLV 346
T V+ HLLFDFLAFKND+SFWK +++ +G+S ++V+WR FS +V+FL+LLDE TS LV
Sbjct: 290 TFFVAAFHLLFDFLAFKNDISFWKKKRSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLV 349
Query: 347 LIPNGISGVIEVWKLLKIFKFDSRSWRFVR-----KTESAHERRTTAYDLEAMRYLSYIL 401
LIP GI VIE+WK+ K K + W+ +R + E++T YD +AM+YLSY+L
Sbjct: 350 LIPAGIGAVIELWKVKKALKMTVK-WQGIRPKVQFGASNDSEKKTEEYDTQAMKYLSYLL 408
Query: 402 YPLCLATAVYSFVYSEHKSVYSWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRT 461
YPLC+ A YS + ++KS YSWL+ S VN VYAFGF+FMLPQLF+NYK+KSVAHLPW+
Sbjct: 409 YPLCIGGAAYSLLNVKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKA 468
Query: 462 FMYKAFNTFIDDVFAFLITMPTMHRLACFRDDIIFLIYLYQRCFEP 507
F YKAFNTFIDD+FAF+ITMPT HRLACFRDD++FL+YLYQR P
Sbjct: 469 FTYKAFNTFIDDIFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYP 514
>sp|Q6DHU1|CLP1L_DANRE Cleft lip and palate transmembrane protein 1-like protein OS=Danio
rerio GN=clptm1l PE=2 SV=1
Length = 538
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/522 (43%), Positives = 332/522 (63%), Gaps = 35/522 (6%)
Query: 8 SLSKIVISVGLGFMIHSVWSIYKLSLPPDCPVER--TCLKSSLLRNPKLELILFSSVKEK 65
S + +++ V L +++H+ W +Y + C R +C+ L P+L+L ++++++
Sbjct: 6 SFTSLIVGVFLLYVLHTCWVMYGIVYTKPCEKRRAESCISPYLAAKPRLQLSVYTALRPN 65
Query: 66 PTGRDVELILEKKKFDYNQAFEENIKLNVPYKTRMNGTLFLHMFIIAHRPNQNWDWDSLA 125
G LI +++FD N FE+ + +++P KTR NGTL+ +F+ H+ + W
Sbjct: 66 ADGGH-SLIHREEEFDVNTKFEKLVNVSLPKKTRKNGTLYAMVFL--HQAGVS-PW---- 117
Query: 126 RHSNQYEIKVYRKVPLSKYALPPDRTFHLLSE----EGPQQKSR-------KPVTHIKSL 174
Q +V+ L+ Y LP L++ E P Q+ + +PV+H +S
Sbjct: 118 ----QDPHQVHLVTQLTTYMLPKPPEISLITGQDEPEKPDQQKQSSDSELDRPVSHWRSR 173
Query: 175 IEFNMLIDVHKFPRLEIPFELYNYFRISNNE----FLPIVAYNLLNDRNTFLKEVKPDTN 230
+ N++ + F R +P +++ Y R+ + +LP++ + L++R L E+ +
Sbjct: 174 LTLNVVSENFLFDREALPGDVHRYMRVYQSGKKMIYLPLLFVDELSNRVKDLMEINSSST 233
Query: 231 EMEIQFKYSPISYGKLRLMLHVEASFKSIAQMGFSDKEIDDVKSMFADTHLYVFLTTMVV 290
E+ + Y I+ GKLR +H++ + S+ Q GF++K+ D++K +F DT+LY T V
Sbjct: 234 ELPLTITYDSIALGKLRFWIHMQDAVYSLQQFGFTEKDADEIKGIFVDTNLYFLALTFFV 293
Query: 291 SFVHLLFDFLAFKNDVSFWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPN 350
+ HLLFDFLAFKND+SFWK++K+ VG+S ++V+WR FS IV+FLYLLDE TS LVL+P
Sbjct: 294 AAFHLLFDFLAFKNDISFWKHKKSMVGMSSKAVLWRCFSTIVIFLYLLDEQTSLLVLVPA 353
Query: 351 GISGVIEVWKLLKIFKFDSRSWR-----FVRKTESAHERRTTAYDLEAMRYLSYILYPLC 405
GI +IEVWK+ K FK WR F+ E+RT YD AM+YLSY+LYPLC
Sbjct: 354 GIGSLIEVWKVKKAFKIHV-IWRGLTPTFLFGKLDESEKRTEEYDTLAMKYLSYLLYPLC 412
Query: 406 LATAVYSFVYSEHKSVYSWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFMYK 465
+ AVY+ V+ ++KS YSW++ SLVN VYAFGF+FMLPQLF+NYKLKSVAHLPW+ FMYK
Sbjct: 413 VGGAVYALVFVKYKSWYSWIINSLVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFMYK 472
Query: 466 AFNTFIDDVFAFLITMPTMHRLACFRDDIIFLIYLYQRCFEP 507
AFNTFIDDVFAF+ITMPT HRLACFRDD++FL+YLYQR P
Sbjct: 473 AFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYP 514
>sp|Q5R7B1|CLP1L_PONAB Cleft lip and palate transmembrane protein 1-like protein OS=Pongo
abelii GN=CLPTM1L PE=2 SV=1
Length = 538
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 314/505 (62%), Gaps = 32/505 (6%)
Query: 23 HSVWSIYKLSLPPDCPVERTCLKSSLLRNPKLELILFSSVKEKPTGRD-VELILEKKKFD 81
H+ W +Y + C + C++ L R PKL+L ++++ + + ++L+L + FD
Sbjct: 22 HTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTTTRSHLGAENNIDLVLNVEDFD 81
Query: 82 YNQAFEENIKLNVPYKTRMNGTLFLHMFIIAHRPNQNWDWDSLARHSNQYEIKVYRKVPL 141
FE + ++VP KTR NGTL+ ++F+ H W H + +V+ PL
Sbjct: 82 VESKFERTVNVSVPKKTRNNGTLYAYIFL-HHAGVLPW-------HDGK---QVHLVSPL 130
Query: 142 SKYALPPDRTFHLLSEEGPQQKSR----------KPVTHIKSLIEFNMLIDVHKFPRLEI 191
+ Y +P +LL+ E Q+ +PV+H + + N++ D F +
Sbjct: 131 TTYMVPKPEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPRLALNVMADNFVFDGSSL 190
Query: 192 PFELYNYFRI----SNNEFLPIVAYNLLNDRNTFLKEVKPDTNEMEIQFKYSPISYGKLR 247
P +++ Y ++ +LPI+ + L++R L + T E+ + Y +S G+LR
Sbjct: 191 PADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKVSLGRLR 250
Query: 248 LMLHVEASFKSIAQMGFSDKEIDDVKSMFADTHLYVFLTTMVVSFVHLLFDFLAFKNDVS 307
+H++ + S+ Q GFS+K+ D+VK +F DT+LY T V+ HLLFDFLAFKND+S
Sbjct: 251 FWIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDIS 310
Query: 308 FWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPNGISGVIEVWKLLKIFKF 367
FWK +K+ +G+S ++V+WR FS +V+FL+LLDE TS LVL+P G+ IE+WK+ K K
Sbjct: 311 FWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKKALKM 370
Query: 368 DSRSWR-----FVRKTESAHERRTTAYDLEAMRYLSYILYPLCLATAVYSFVYSEHKSVY 422
+ WR F T S ER+T YD +AM+YLSY+LYPLC+ AVYS + ++KS Y
Sbjct: 371 -TILWRGLMPEFELGTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYSLLNIKYKSWY 429
Query: 423 SWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFMYKAFNTFIDDVFAFLITMP 482
SWL+ S VN VYAFGF+FMLPQLF+NYKLKSVAHLPW+ F YKAFNTFIDDVFAF+ITMP
Sbjct: 430 SWLINSFVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMP 489
Query: 483 TMHRLACFRDDIIFLIYLYQRCFEP 507
T HRLACFRDD++FL+YLYQR P
Sbjct: 490 TSHRLACFRDDVVFLVYLYQRWLYP 514
>sp|Q8BXA5|CLP1L_MOUSE Cleft lip and palate transmembrane protein 1-like protein OS=Mus
musculus GN=Clptm1l PE=2 SV=1
Length = 539
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/506 (42%), Positives = 316/506 (62%), Gaps = 33/506 (6%)
Query: 23 HSVWSIYKLSLPPDCPVERTCLKSSLLRNPKLELILFSSVKEKPTGRD-VELILEKKKFD 81
H+ W +Y + C + C++ L PKL+L ++++ + + V+LIL + FD
Sbjct: 22 HTCWVMYGIVYTRPCSGDSNCIQPYLALRPKLQLSVYTTTRSSLGAENNVDLILNVEDFD 81
Query: 82 YNQAFEENIKLNVPYKTRMNGTLFLHMFIIAHRPNQNWDWDSLARHSNQYEIKVYRKVPL 141
+ FE + ++VP KTR NGTL+ ++F+ H W Q +V+ L
Sbjct: 82 VDSKFERTVNVSVPKKTRNNGTLYAYIFL-HHAGILPW----------QDGKQVHVVSTL 130
Query: 142 SKYALPPDRTFHLLSEEGPQQKS-----------RKPVTHIKSLIEFNMLIDVHKFPRLE 190
+ Y +P +LL+ E Q+ +PV+H + + N+++D F
Sbjct: 131 TTYMIPKPEEINLLTGESATQQQIEAEKKPSNALDEPVSHWRPRLTLNVMVDDFVFDGSS 190
Query: 191 IPFELYNYFRI----SNNEFLPIVAYNLLNDRNTFLKEVKPDTNEMEIQFKYSPISYGKL 246
+P +++ Y ++ +LPI+ + L++R L + T E+ + Y IS G+L
Sbjct: 191 LPADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKISLGRL 250
Query: 247 RLMLHVEASFKSIAQMGFSDKEIDDVKSMFADTHLYVFLTTMVVSFVHLLFDFLAFKNDV 306
R +H++ + S+ Q GFS+K+ D++K +F DT+LY+ T V+ HLLFDFLAFK+D+
Sbjct: 251 RFWIHMQDAVYSLQQFGFSEKDADELKGIFVDTNLYLLALTFFVAAFHLLFDFLAFKSDI 310
Query: 307 SFWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPNGISGVIEVWKLLKIFK 366
SFWK +K+ +G+S ++V+WR FS +V+FL+LLDE TS LVLIP G+ IE+WK+ K K
Sbjct: 311 SFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLIPAGVGAAIELWKVKKALK 370
Query: 367 FDSRSWRFVR-----KTESAHERRTTAYDLEAMRYLSYILYPLCLATAVYSFVYSEHKSV 421
+ +WR +R T S ER+T YD +AM+YLSY+LYPLC+ AVYS + ++KS
Sbjct: 371 I-TVAWRGLRPVFQFGTHSESERKTEKYDAQAMKYLSYLLYPLCVGGAVYSLLNIKYKSW 429
Query: 422 YSWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFMYKAFNTFIDDVFAFLITM 481
YSWL+ S VN VYAFGF+FMLPQLF+NYK+KSVAHLPW+ F YKAFNTFIDDVFAF+ITM
Sbjct: 430 YSWLINSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDVFAFIITM 489
Query: 482 PTMHRLACFRDDIIFLIYLYQRCFEP 507
PT HRLACFRDD++FL+YLYQR P
Sbjct: 490 PTSHRLACFRDDVVFLVYLYQRWLYP 515
>sp|Q96KA5|CLP1L_HUMAN Cleft lip and palate transmembrane protein 1-like protein OS=Homo
sapiens GN=CLPTM1L PE=1 SV=1
Length = 538
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/505 (42%), Positives = 314/505 (62%), Gaps = 32/505 (6%)
Query: 23 HSVWSIYKLSLPPDCPVERTCLKSSLLRNPKLELILFSSVKEKPTGRD-VELILEKKKFD 81
H+ W +Y + C + C++ L R PKL+L ++++ + + ++L+L + FD
Sbjct: 22 HTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTTTRSHLGAENNIDLVLNVEDFD 81
Query: 82 YNQAFEENIKLNVPYKTRMNGTLFLHMFIIAHRPNQNWDWDSLARHSNQYEIKVYRKVPL 141
FE + ++VP KTR NGTL+ ++F+ H W H + +V+ PL
Sbjct: 82 VESKFERTVNVSVPKKTRNNGTLYAYIFL-HHAGVLPW-------HDGK---QVHLVSPL 130
Query: 142 SKYALPPDRTFHLLSEEGPQQKSR----------KPVTHIKSLIEFNMLIDVHKFPRLEI 191
+ Y +P +LL+ E Q+ +PV+H + + N++ D F +
Sbjct: 131 TTYMVPKPEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPRLALNVMADNFVFDGSSL 190
Query: 192 PFELYNYFRI----SNNEFLPIVAYNLLNDRNTFLKEVKPDTNEMEIQFKYSPISYGKLR 247
P +++ Y ++ +LPI+ + L++R L + T E+ + Y +S G+LR
Sbjct: 191 PADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKVSLGRLR 250
Query: 248 LMLHVEASFKSIAQMGFSDKEIDDVKSMFADTHLYVFLTTMVVSFVHLLFDFLAFKNDVS 307
+H++ + S+ Q GFS+K+ D+VK +F DT+LY T V+ HLLFDFLAFKND+S
Sbjct: 251 FWIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDIS 310
Query: 308 FWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPNGISGVIEVWKLLKIFKF 367
FWK +K+ +G+S ++V+WR FS +V+FL+LLDE TS LVL+P G+ IE+WK+ K K
Sbjct: 311 FWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKKALKM 370
Query: 368 DSRSWR-----FVRKTESAHERRTTAYDLEAMRYLSYILYPLCLATAVYSFVYSEHKSVY 422
+ WR F T S ER+T YD +AM+YLSY+LYPLC+ AVYS + ++KS Y
Sbjct: 371 -TIFWRGLMPEFQFGTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYSLLNIKYKSWY 429
Query: 423 SWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFMYKAFNTFIDDVFAFLITMP 482
SWL+ S VN VYAFGF+FMLPQLF+NYKLKSVAHLPW+ F YKAFNTFIDDVFAF+ITMP
Sbjct: 430 SWLINSFVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMP 489
Query: 483 TMHRLACFRDDIIFLIYLYQRCFEP 507
T HRLACFRDD++FL+YLYQR P
Sbjct: 490 TSHRLACFRDDVVFLVYLYQRWLYP 514
>sp|A2VE61|CLP1L_BOVIN Cleft lip and palate transmembrane protein 1-like protein OS=Bos
taurus GN=CLPTM1L PE=2 SV=1
Length = 538
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/505 (42%), Positives = 314/505 (62%), Gaps = 32/505 (6%)
Query: 23 HSVWSIYKLSLPPDCPVERTCLKSSLLRNPKLELILFSSVKEK-PTGRDVELILEKKKFD 81
H+ W +Y + C C++ L + PKL+L ++++ + + +V+L+L + FD
Sbjct: 22 HTCWVMYGIVYTRPCSGHGRCIQPYLAQRPKLQLSVYTTTRSNLGSENNVDLVLNVEDFD 81
Query: 82 YNQAFEENIKLNVPYKTRMNGTLFLHMFIIAHRPNQNWDWDSLARHSNQYEIKVYRKVPL 141
FE + ++VP KTR NGTL+ ++F+ H W+ D+ +V+ PL
Sbjct: 82 VESKFERTVNVSVPKKTRNNGTLYAYVFL-HHAGVLPWN-DAK---------QVHLVSPL 130
Query: 142 SKYALPPDRTFHLLS----------EEGPQQKSRKPVTHIKSLIEFNMLIDVHKFPRLEI 191
+ Y +P LL+ E+ P +PV+H + + N+++D F +
Sbjct: 131 TTYMVPRPEEVSLLAGGPAAQQIEAEKRPTSALDEPVSHWRPRLTLNVMVDNFVFDGASL 190
Query: 192 PFELYNYFRI----SNNEFLPIVAYNLLNDRNTFLKEVKPDTNEMEIQFKYSPISYGKLR 247
P ++ Y ++ ++LPI+ + L++R L + + E+ + Y IS G+LR
Sbjct: 191 PADVQRYMKMIQLGKTVQYLPILFIDQLSNRVKDLMVINRSSTELPLTVSYDKISLGRLR 250
Query: 248 LMLHVEASFKSIAQMGFSDKEIDDVKSMFADTHLYVFLTTMVVSFVHLLFDFLAFKNDVS 307
+H++ + S+ Q GFS+K+ D+VK +F DT+LY T V+ HLLFDFLAFKND+S
Sbjct: 251 FWIHMQDAVYSLQQFGFSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDIS 310
Query: 308 FWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPNGISGVIEVWKLLKIFKF 367
FWK +K+ +G+S ++V+WR FS +V+FL+LLDE TS VL+P GI IE+WK+ K K
Sbjct: 311 FWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLPVLVPAGIGAAIELWKVKKALKM 370
Query: 368 DSRSWR-----FVRKTESAHERRTTAYDLEAMRYLSYILYPLCLATAVYSFVYSEHKSVY 422
+ WR F T S ERRT YD +AM+YLSY+LYPLC+ A+YS + ++KS Y
Sbjct: 371 -TVIWRGLWPTFQFGTYSESERRTEEYDAQAMKYLSYLLYPLCIGGAIYSLLNIKYKSWY 429
Query: 423 SWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFMYKAFNTFIDDVFAFLITMP 482
SWL+ S VN VYAFGF+FMLPQLF+NYK+KSVAHLPW+ F YKAFNTFIDDVFAF+ITMP
Sbjct: 430 SWLINSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDVFAFIITMP 489
Query: 483 TMHRLACFRDDIIFLIYLYQRCFEP 507
T HRLACFRDD++FL+YLYQR P
Sbjct: 490 TSHRLACFRDDVVFLVYLYQRWLYP 514
>sp|Q54RJ1|CNRB_DICDI CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum
GN=cnrB PE=3 SV=1
Length = 619
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 250/465 (53%), Gaps = 45/465 (9%)
Query: 73 LILEKKKFDY-----NQAFEENIKLNVPYKTRMNGTLFLHMFIIAHRPNQNWDWDSLARH 127
L+ E+ K Y N +NI + + NG+LF H II R +
Sbjct: 109 LVWEQDKLSYDWKDSNTIPTKNITFDTTPYLQNNGSLFAH--IITSR----------RAY 156
Query: 128 SNQYEIKVYRKVPLSKYALPPDRTFHLLSEEGPQQKSR------KPVTHIKSLIEFNMLI 181
NQ + ++++ PL Y P L EE + + + +++ K + ++++
Sbjct: 157 LNQPKSQLHKVHPLIVYLPKPKPKGKNLLEEKSKDEPEVEYDPTELISYWKPTLSLHLIV 216
Query: 182 DVHKFPRLEIPFELYNYFRISNNEFLPIVAYNLLNDRNTFLKEVKPDTNEMEIQFKYSPI 241
D +P IP E+ +YF I+N + PI+ N LK V ++ I+ YS +
Sbjct: 217 DHTIYPPDSIPKEIVSYFNITNGFYSPIIYCNEFWLYREHLKPVNETVKQLSIEINYSSM 276
Query: 242 SYGKLRLMLHVEASFKSIAQMGFSDKEI---------DDVKSMFADTHLYVFLTTMVVSF 292
K +L + ++ S Q F D+ K M D ++ T++VS
Sbjct: 277 GLFKWQLQIQMQKSLD--MQESFGGGGNSAMGGASVGDEFKRMLTDNDPWILGLTLIVSV 334
Query: 293 VHLLFDFLAFKNDVSFWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPNGI 352
+H +F+FLAFKND+ FWKN K+ G+SV+++ ++FLYLLD TSY++L +G
Sbjct: 335 LHTIFEFLAFKNDIQFWKNNKSMEGLSVKTITLNCVCMGIIFLYLLDNETSYMILASSGF 394
Query: 353 SGVIEVWKLLKIFKFD---------SRSWRFVRKTESAHERRTTAYDLEAMRYLSYILYP 403
++E WKL K + F+ K E + +T YD AM+YLS++L+P
Sbjct: 395 GFLVEFWKLGKAMTIKITWMTSLPLPKRIEFINKDE--YMSKTKQYDDMAMKYLSWLLFP 452
Query: 404 LCLATAVYSFVYSEHKSVYSWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFM 463
L + T++YS Y EHKS YSW++ SLV VY F FI M PQLFINYKLKSV+HLPWR FM
Sbjct: 453 LVIGTSIYSLYYHEHKSWYSWVVSSLVRTVYTFEFIMMTPQLFINYKLKSVSHLPWRVFM 512
Query: 464 YKAFNTFIDDVFAFLITMPTMHRLACFRDDIIFLIYLYQRCFEPA 508
Y+A NTFIDD+FAF+I MP +HRL+C RDDIIF++YLYQR P
Sbjct: 513 YRALNTFIDDLFAFIIKMPLLHRLSCLRDDIIFIVYLYQRWIYPV 557
>sp|O96005|CLPT1_HUMAN Cleft lip and palate transmembrane protein 1 OS=Homo sapiens
GN=CLPTM1 PE=1 SV=1
Length = 669
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 241/449 (53%), Gaps = 34/449 (7%)
Query: 83 NQAFEENIKLNVPYKTRMNGTLFLHMFIIAHR----PNQNWDWDSLA-----RHSNQYEI 133
+ +E +L++P + NG++++H++ P Q + LA R N+Y+
Sbjct: 143 DGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSRMINKYKR 202
Query: 134 KVYRKVP--LSKYALPPDRTFHLLSEEGPQQKSRKPVTHIKSLIEFNMLIDVHKFPRLEI 191
+ ++K L+ + GP + ++H I N++ D + + +
Sbjct: 203 RRFQKTKNLLTGETEADPEMIKRAEDYGPVEV----ISHWHPNITINIVDDHTPWVKGSV 258
Query: 192 PFELYNY--FRISNNEFLPIVAYNLLNDRNTFLKEVKPDTNEMEIQFKYSPISYGKLRLM 249
P L Y F + ++ PI+ +N + + + ++ + P+S R
Sbjct: 259 PPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSL--WRWQ 316
Query: 250 LHVEASFKSIAQ-MG-----FSDKEIDDVKSMFADTHLYVFLTTMVVSFVHLLFDFLAFK 303
L+ S KS +G SD+E D VK +T+ Y+ T++VS VH +F+FLAFK
Sbjct: 317 LYAAQSTKSPWNFLGDELYEQSDEEQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFK 376
Query: 304 NDVSFWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPNGISGVIEVWKLLK 363
ND+ FW +R++ G+SVRSV + F VV LY+LD T+++V + I +I++WK+ K
Sbjct: 377 NDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITK 436
Query: 364 IF--KFDSRSW------RFVRKTESAH-ERRTTAYDLEAMRYLSYILYPLCLATAVYSFV 414
+ + D R K +S + E T YD A RYLS+IL+PL AVYS +
Sbjct: 437 VMDVRLDREHRVAGIFPRLSFKDKSTYIESSTKVYDDMAFRYLSWILFPLLGCYAVYSLL 496
Query: 415 YSEHKSVYSWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFMYKAFNTFIDDV 474
Y EHK YSW+L L + FGFI M PQLFINYKLKSVAHLPWR YKA NTFIDD+
Sbjct: 497 YLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDL 556
Query: 475 FAFLITMPTMHRLACFRDDIIFLIYLYQR 503
FAF+I MP M+R+ C RDD++F IYLYQR
Sbjct: 557 FAFVIKMPVMYRIGCLRDDVVFFIYLYQR 585
>sp|Q8VBZ3|CLPT1_MOUSE Cleft lip and palate transmembrane protein 1 homolog OS=Mus
musculus GN=Clptm1 PE=1 SV=1
Length = 664
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 239/449 (53%), Gaps = 34/449 (7%)
Query: 83 NQAFEENIKLNVPYKTRMNGTLFLHMFIIAHR----PNQNWDWDSLA-----RHSNQYEI 133
+ +E +L++P + NG++++H++ P Q + LA R N+Y+
Sbjct: 143 DGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSRMINKYKR 202
Query: 134 KVYRKVP--LSKYALPPDRTFHLLSEEGPQQKSRKPVTHIKSLIEFNMLIDVHKFPRLEI 191
+ ++K L+ + GP + ++H I N++ D + + +
Sbjct: 203 RRFQKTKNLLTGETEADPEMIKRAEDYGPVEV----ISHWHPNITINIVDDHTPWVKGSV 258
Query: 192 PFELYNY--FRISNNEFLPIVAYNLLNDRNTFLKEVKPDTNEMEIQFKYSPISYGKLRLM 249
P L Y F + ++ PI+ +N + + + ++ + P+S R
Sbjct: 259 PPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSL--WRWQ 316
Query: 250 LHVEASFKSIAQ-MG-----FSDKEIDDVKSMFADTHLYVFLTTMVVSFVHLLFDFLAFK 303
L+ S KS +G SD+E D VK +T Y+ T++VS VH +F+FLAFK
Sbjct: 317 LYAAQSTKSPWNFLGDELYEQSDEEQDSVKVALLETSPYLLALTIIVSIVHSVFEFLAFK 376
Query: 304 NDVSFWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPNGISGVIEVWKLLK 363
ND+ FW +R++ G+SVRSV + F VV LY+LD T+++V + I +I++WK+ K
Sbjct: 377 NDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITK 436
Query: 364 IFKFD-SRSWRFVR-------KTESAH-ERRTTAYDLEAMRYLSYILYPLCLATAVYSFV 414
+ R R K +S + E T YD A RYLS+IL+PL AVYS +
Sbjct: 437 VMDVRLDREHRVAGIFPCPTFKDKSTYIESSTKVYDDMAFRYLSWILFPLLGCYAVYSLL 496
Query: 415 YSEHKSVYSWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFMYKAFNTFIDDV 474
Y EHK YSW+L L + FGFI M PQLFINYKLKSVAHLPWR YKA NTFIDD+
Sbjct: 497 YLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDL 556
Query: 475 FAFLITMPTMHRLACFRDDIIFLIYLYQR 503
FAF+I MP M+R+ C RDD++F IYLYQR
Sbjct: 557 FAFVIKMPVMYRIGCLRDDVVFFIYLYQR 585
>sp|Q2NL17|CLPT1_BOVIN Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus
GN=CLPTM1 PE=2 SV=1
Length = 670
Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 237/452 (52%), Gaps = 40/452 (8%)
Query: 83 NQAFEENIKLNVPYKTRMNGTLFLHMFIIAHR----PNQNWDWDSLA-----RHSNQYEI 133
+ +E +L++P + NG++++H++ P Q + LA R N+Y+
Sbjct: 143 DGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSRMINKYKR 202
Query: 134 KVYRKVP--LSKYALPPDRTFHLLSEEGPQQKSRKPVTHIKSLIEFNMLIDVHKFPRLEI 191
+ ++K L+ + GP + ++H I N++ D + + +
Sbjct: 203 RRFQKTKNLLTGETEADPEMIKRAEDYGPVEV----ISHWHPNITINIVDDHTPWVKGSV 258
Query: 192 PFELYNY--FRISNNEFLPIVAYNLLNDRNTFLKEVKPDTNEMEIQFKYSPISYGKLRLM 249
P L Y F + ++ PI+ +N + + + ++ + P+S + +L
Sbjct: 259 PPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQLY 318
Query: 250 LHVEA----SFKSIAQMGFSDKEIDDVKSMFADTHLYVFLTTMVVSFVHLLFDFLAFKND 305
A +F SD+E D VK +T+ Y+ T++VS VH +F+FLAFKND
Sbjct: 319 AAQSAKSPWNFLGDELYEQSDEEQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFKND 378
Query: 306 VSFWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPNGISGVIEVWKLLKIF 365
+ FW +R++ G+SVRSV + F VV LY+LD T+++V + I +I++WK+ K+
Sbjct: 379 IQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVM 438
Query: 366 KFDSRSWRFVRKTESAH--------------ERRTTAYDLEAMRYLSYILYPLCLATAVY 411
R R+ + A E T YD A RYLS+IL+PL AVY
Sbjct: 439 DV-----RLDREHKVAGLLPRPTFQDKSTYVESSTKVYDDMAFRYLSWILFPLLGCYAVY 493
Query: 412 SFVYSEHKSVYSWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFMYKAFNTFI 471
S +Y EHK YSW+L L + FGFI M PQLFINYKLKSVAHLPWR YKA NTFI
Sbjct: 494 SLLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFI 553
Query: 472 DDVFAFLITMPTMHRLACFRDDIIFLIYLYQR 503
DD+FAF+I MP M+R+ C RDD++F IYLYQR
Sbjct: 554 DDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQR 585
>sp|Q6DEL2|CLPT1_DANRE Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio
GN=clptm1 PE=2 SV=1
Length = 631
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/451 (35%), Positives = 244/451 (54%), Gaps = 38/451 (8%)
Query: 83 NQAFEENIKLNVPYKTRMNGTLFLHMFIIAHR----PNQNWDWDSLAR-HSNQYEIKVYR 137
+ +E +L++ + NG++++H++ P + + L+ H+ + K R
Sbjct: 141 DGCYEYYKELDLSESVKQNGSIYMHIYFTKSGFHPDPKRKGQYRRLSTVHATRMLNKYKR 200
Query: 138 KVPLSKYALPPDRTFHLLSEEGPQ----QKSRKPV---THIKSLIEFNMLIDVHKFPRLE 190
+ L L T E P+ +S PV +H + NM+ D + +
Sbjct: 201 RKFLKTKNLLTGET-----EADPEMIKRAESHGPVEIISHWHPNLTINMVDDHTAWVKGS 255
Query: 191 IPFELYNY--FRISNNEFLPIVAYNLLNDRNTFLKEVKPDTN---EMEIQFKYSPISYGK 245
+P L + F + ++ PIV +N D K+ P + + ++ Y P+S +
Sbjct: 256 VPPPLDQHVKFDAVSGDYYPIVYFN---DYWNLQKDYYPINDTLLNLPLRLTYCPLSLWR 312
Query: 246 LRLMLHVEA----SFKSIAQMGFSDKEIDDVKSMFADTHLYVFLTTMVVSFVHLLFDFLA 301
+L A +F SD++ D VK +T+ Y+ T+VVS VH +F+FLA
Sbjct: 313 WQLYAAQSARSPWNFLGEDTYEQSDEDQDSVKVALLETNPYLLGLTIVVSIVHSIFEFLA 372
Query: 302 FKNDVSFWKNRKNTVGISVRSVMWRTFSQIVVFLYLLDENTSYLVLIPNGISGVIEVWKL 361
FKND+ FW +R++ G+SVRS+++ F +VV LY+LD T+++V + I +I+ WK+
Sbjct: 373 FKNDIQFWNSRQSLEGLSVRSIIFGVFQSLVVLLYILDNETNFVVQVSVFIGLLIDFWKI 432
Query: 362 LKIF--KFDSRSW------RFVRKTESAH-ERRTTAYDLEAMRYLSYILYPLCLATAVYS 412
K+ + D + R V K +S + E T YD A +YLS++LYPL AVYS
Sbjct: 433 TKVMDVRLDRENRIAGIVPRLVFKDKSTYVESSTKIYDDMAFKYLSWLLYPLFGCYAVYS 492
Query: 413 FVYSEHKSVYSWLLRSLVNAVYAFGFIFMLPQLFINYKLKSVAHLPWRTFMYKAFNTFID 472
+Y EHK YSW+L L + FGFI M PQLFINYK+KSVAHLPWR YKA NTFID
Sbjct: 493 LLYVEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKMKSVAHLPWRMLTYKALNTFID 552
Query: 473 DVFAFLITMPTMHRLACFRDDIIFLIYLYQR 503
D+FAF+I MP M+R+ C RDD++F IYLYQR
Sbjct: 553 DLFAFVIKMPMMYRIGCLRDDVVFFIYLYQR 583
>sp|Q75E74|ATG2_ASHGO Autophagy-related protein 2 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG2 PE=3 SV=3
Length = 1525
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 196 YNYFRISNN--EFLPIVAYNLLNDRNTFLKEVKPDTNEMEIQFKY---SPISYGKLRL-- 248
Y FR N E L I + + R T + VK +++++ +Y S ++ G++ +
Sbjct: 332 YKRFRQEQNLEEDLQITGFTIEELRITLSQSVKVSVIDIQLRNRYIENSTVTVGRVTICD 391
Query: 249 ----MLHVEASFKSIAQMGFSDKEIDDVKSMFADTHLYVFLTTMVVSFVHLLF 297
+LH++A K ++ +++ + S+ D H+ + +T V S + L+F
Sbjct: 392 YDLDLLHIDAGSKPCLELTVDSRKLQRIISVDGDIHMDIS-STFVSSLIPLIF 443
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,239,385
Number of Sequences: 539616
Number of extensions: 7707964
Number of successful extensions: 20691
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 20636
Number of HSP's gapped (non-prelim): 29
length of query: 511
length of database: 191,569,459
effective HSP length: 122
effective length of query: 389
effective length of database: 125,736,307
effective search space: 48911423423
effective search space used: 48911423423
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)