BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5318
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 81/104 (77%)
Query: 45 NPGDYAWGREGLDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWE 104
NPGDYAWG+ GLDAIVTQLL Q++ +GPPP +KI +P +T+ Q+D L+C VC E
Sbjct: 174 NPGDYAWGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKE 233
Query: 105 QFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESA 148
+T++E VR+LPC+HF+H+ CI PWL+LH TCP+CR++L+ E +
Sbjct: 234 DYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDS 277
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 82/104 (78%)
Query: 45 NPGDYAWGREGLDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWE 104
NPGDYAWG+ GLDAIVTQLL Q++ +GPPP +KI +P +T+ Q+++ L+C VC E
Sbjct: 175 NPGDYAWGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVNTGLECPVCKE 234
Query: 105 QFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESA 148
+T++E VR+LPC+HF+H+ CI PWL+LH TCP+CR++L+ E +
Sbjct: 235 DYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDS 278
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 7/123 (5%)
Query: 45 NPGDYAWGREGLDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWE 104
NP DYAWG GLD I+TQLLNQ + +GPPP T+KI+ +P IT+ + S L+C VC E
Sbjct: 173 NPMDYAWGANGLDTIITQLLNQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKE 232
Query: 105 QFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPAGAGGPGGLNM 164
+T+ E+VR+LPC+H +H CI PWL+ H TCP+CR++L ++ A P GL
Sbjct: 233 DYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNT-------ATNPPGLTE 285
Query: 165 ATF 167
TF
Sbjct: 286 MTF 288
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 7/123 (5%)
Query: 45 NPGDYAWGREGLDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWE 104
NP DYAWG GLD I+TQLLNQ + +GPPP TDKI+ +P IT+ + L+C VC E
Sbjct: 174 NPMDYAWGANGLDTIITQLLNQFENTGPPPADTDKIQALPTIQITEEHVGFGLECPVCKE 233
Query: 105 QFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPAGAGGPGGLNM 164
+T+ E+VR+LPC+H +H CI PWL+ H TCP+CR++L ++ A P GL
Sbjct: 234 DYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNT-------ATNPPGLTD 286
Query: 165 ATF 167
TF
Sbjct: 287 MTF 289
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 80/123 (65%), Gaps = 7/123 (5%)
Query: 45 NPGDYAWGREGLDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWE 104
NP DYAWG GLD I+TQLLNQ + +GPPP +KI+ +P IT+ + S L+C VC E
Sbjct: 174 NPMDYAWGANGLDTIITQLLNQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCKE 233
Query: 105 QFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPAGAGGPGGLNM 164
+T+ E VR+LPC+H +H CI PWL+ H TCP+CR++L ++ A P GL+
Sbjct: 234 DYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNT-------ATNPPGLSE 286
Query: 165 ATF 167
TF
Sbjct: 287 MTF 289
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 1/116 (0%)
Query: 45 NPGDYAWGREGLDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWE 104
NP DYAWG GLD I+TQLLNQ + +GPPP +KI+ +P +T+ + S L+C VC E
Sbjct: 177 NPMDYAWGANGLDTIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKE 236
Query: 105 QFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPAGAGGPG 160
+ L E+VR+LPC+H +H CI PWL+ H +CP+CR++L ++ + P G G G
Sbjct: 237 DYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNT-ATNPPGLTGVG 291
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%)
Query: 45 NPGDYAWGREGLDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWE 104
NP DYAWG GLDAI+TQLLNQ + +GPPP +KI+ +P +T+ + S L+C VC +
Sbjct: 178 NPMDYAWGANGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKD 237
Query: 105 QFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPAGAG 157
+ L E VR+LPC+H +H CI PWL+ H +CP+CR++L ++ + P AG
Sbjct: 238 DYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATDPPGLAG 290
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%)
Query: 42 FEGNPGDYAWGREGLDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSV 101
NP DYAWG GLDAI+TQLLNQ + +GPPP +KI+ +P +T+ + S L+C V
Sbjct: 172 LHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPV 231
Query: 102 CWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPAGAG 157
C + + L E VR+LPC+H +H CI PWL+ H +CP+CR++L ++ + P G
Sbjct: 232 CKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTG 287
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 41 HFEGNPGDYAWGREGLDAIVTQLLNQMDG-SGPPPLSTDKIKQIPVAHITKAQIDSNLQC 99
+ GNPGDYAWG GLD I++QL+ Q G + P P D I ++ V K ID +C
Sbjct: 337 NLSGNPGDYAWGARGLDDIISQLMEQAQGHNAPAPAPEDVIAKMKVQKPPKELIDEEGEC 396
Query: 100 SVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAE 149
++C E F +++ V +LPC H++H CI+PWL+++GTC ICR + S +
Sbjct: 397 TICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDPNSQQ 446
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 45 NPGDYAWGREGLDAIVTQLL-NQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNL-QCSVC 102
N GDY G GL+ ++ QL N + G PP S I+ +P+ +ITK+ ++S QC+VC
Sbjct: 169 NIGDYFIG-PGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVC 227
Query: 103 WEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAE 149
+ F +++PC H YH C+ PWL+LH +CP+CR L ++ +
Sbjct: 228 MDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPD 274
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 44 GNPGDYAWGREGLDAIVTQLL-NQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNL-QCSV 101
GN GDY +G GL+ ++ QL N + G PP S I +P +TK + S + QC+V
Sbjct: 160 GNFGDYFFG-PGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAV 218
Query: 102 CWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAE 149
C ++F V+++PC H +H C+ PWL+LH +CP+CR L ++ +
Sbjct: 219 CMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPD 266
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 64 LNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYHT 123
+ D PPP S ++ +P +T Q D+ L+C VC +F E VR+LPC+H +H+
Sbjct: 44 FTEWDQRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHS 103
Query: 124 PCIEPWLQLHGTCPICRQTLHSES 147
CI PWL +CP+CR L ++S
Sbjct: 104 ACILPWLGKTNSCPLCRHELPTDS 127
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 64 LNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYHT 123
L+ D PPP + ++ +PV I+ Q D ++C VC +F E+VR++PC H +HT
Sbjct: 44 LSDWDQRLPPPAAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHT 103
Query: 124 PCIEPWLQLHGTCPICRQTLHSESAE 149
CI PWL +CP+CR L +++A+
Sbjct: 104 GCILPWLNKTNSCPLCRLELPTDNAD 129
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 56 LDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHIT-KAQIDSN---LQCSVCWEQFTLDEA 111
+D+ +L + D G L+ D + +IP IT K +D++ CSVC + F L E
Sbjct: 144 VDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGET 203
Query: 112 VRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTL 143
VR LP C H +H PCI+ WL HG+CP+CR+ L
Sbjct: 204 VRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 55 GLDAIVTQLLNQMDGSGP--PPLSTDKIKQIPVAHITK---AQIDSNLQCSVCWEQFTLD 109
GLD I+ +L+ DG P PP S + ++++PV T+ + + +C +C E +
Sbjct: 183 GLDMIIPDILD--DGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIG 240
Query: 110 EAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTL 143
+ +++LPC H +H PC++PWL H +CPICR L
Sbjct: 241 DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL 274
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%)
Query: 64 LNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYHT 123
+ D PPP + ++ +P +T Q D+ L+C VC +F E VR+LPC+H +H+
Sbjct: 44 FTEWDQRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHS 103
Query: 124 PCIEPWLQLHGTCPICRQTLHSES 147
CI PWL +CP+CR L ++S
Sbjct: 104 SCILPWLGKTNSCPLCRHELPTDS 127
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%)
Query: 76 STDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGT 135
S+ K + A+ +K + L CSVC EQ T+ E VR LPC H +H CI+PWL+ GT
Sbjct: 188 SSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGT 247
Query: 136 CPICRQTLHS 145
CP+C+ HS
Sbjct: 248 CPVCKFRAHS 257
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 26 VGVSLANPEFAPLLPHFEGNPGDYAWGREGLDAIVTQLLNQMDGSG-----PPPLSTDKI 80
+G+ + EF + GNP DY G +A++ L G G PP + I
Sbjct: 179 MGIEDNSIEFRMESDRYAGNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAI 238
Query: 81 KQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 140
+ + ++ ++ + + C+VC + + E +KLPC H YH CI PWL +CP+CR
Sbjct: 239 EALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCR 298
Query: 141 QTLHSESAE 149
L ++ AE
Sbjct: 299 FQLETDDAE 307
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 67 MDGSGPPPLSTDKIKQIPVAHITKAQ----IDSNLQCSVCWEQFTLDEAVRKLP-CDHFY 121
D G L+ D +++IP IT ++ CSVC + F L E VR LP C H +
Sbjct: 160 FDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMF 219
Query: 122 HTPCIEPWLQLHGTCPICRQTL 143
H PCI+ WL HG+CP+CR+ +
Sbjct: 220 HLPCIDNWLLRHGSCPMCRRDI 241
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 63 LLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYH 122
LLN+ D P L+ ++I + + + D+ CSVC ++T +RKLPC H YH
Sbjct: 534 LLNEDDDDQPRGLTKEQIDNLSTRNF--GENDALKTCSVCITEYTEGNKLRKLPCSHEYH 591
Query: 123 TPCIEPWLQLHGTCPICRQTL 143
CI+ WL + TCPICR+ +
Sbjct: 592 IHCIDRWLSENSTCPICRRAV 612
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 63 LLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYH 122
LLN+ D P L+ ++I + + + D+ CSVC ++T +RKLPC H YH
Sbjct: 551 LLNEDDDDQPRGLTKEQIDNLSTRNF--GENDALKTCSVCITEYTEGNKLRKLPCSHEYH 608
Query: 123 TPCIEPWLQLHGTCPICRQTL 143
CI+ WL + TCPICR+ +
Sbjct: 609 VHCIDRWLSENSTCPICRRAV 629
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 67 MDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLP-CDHFYHTPC 125
D + L+ D + +IP IT + + CSVC + F + E VR LP C H +H PC
Sbjct: 145 FDTAISKGLTGDSLNRIPKVRITDTSPE-IVSCSVCLQDFQVGETVRSLPHCHHMFHLPC 203
Query: 126 IEPWLQLHGTCPICRQTL 143
I+ WL+ H +CP+CR+ L
Sbjct: 204 IDKWLRRHASCPLCRRHL 221
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 63 LLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYH 122
LLN+ D P L+ ++I + + + D+ CSVC ++T +RKLPC H YH
Sbjct: 669 LLNEDDDDQPRGLTKEQIDNLSTRNY--GENDALKTCSVCITEYTEGNKLRKLPCSHEYH 726
Query: 123 TPCIEPWLQLHGTCPICRQTL 143
CI+ WL + TCPICR+ +
Sbjct: 727 IHCIDRWLSENSTCPICRRAV 747
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 96 NLQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTLHSESA--ESLG 152
L+C++C +F DE +R LP CDH +H CI+ WL+ H TCP+CR L + A ES+
Sbjct: 125 ELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVE 184
Query: 153 PAG 155
P G
Sbjct: 185 PGG 187
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 63 LLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYH 122
LLN+ D P L+ ++I + A + + D+ CSVC ++T +RKLPC H YH
Sbjct: 536 LLNEDDDDQPRGLTKEQIDNL--AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYH 593
Query: 123 TPCIEPWLQLHGTCPICRQ-TLHSESAESL 151
CI+ WL + TCPICR+ L S + ES+
Sbjct: 594 VHCIDRWLSENSTCPICRRAVLASGNRESV 623
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 63 LLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYH 122
LLN+ D P L+ ++I + A + + D+ CSVC ++T +RKLPC H YH
Sbjct: 512 LLNEDDEDQPRGLTKEQIDNL--AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYH 569
Query: 123 TPCIEPWLQLHGTCPICRQ-TLHSESAESL 151
CI+ WL + TCPICR+ L S + ES+
Sbjct: 570 VHCIDRWLSENSTCPICRRAVLSSGNRESV 599
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 73 PPLSTDKIKQIPVAHITKAQ--IDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL 130
PP S + I +P +T+ + + C +C ++ E +LPC H++H PC+ WL
Sbjct: 502 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 561
Query: 131 QLHGTCPICR 140
Q GTCP+CR
Sbjct: 562 QKSGTCPVCR 571
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 75 LSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL-QLH 133
L+ +++KQIP K D C++C +++ + +R LPC H YH+ C++PWL Q
Sbjct: 208 LTKEQLKQIPTHDYQKG--DQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTR 265
Query: 134 GTCPICRQTLH 144
TCPIC+Q +H
Sbjct: 266 KTCPICKQPVH 276
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 63 LLNQMDGSG----------PPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAV 112
L N+MD PPP + ++ +P I+ A+ D L+C VC +F +E V
Sbjct: 44 LFNRMDFEDLGLVDWEHHLPPPAAKAVVESLPRTVISSAKAD--LKCPVCLLEFEAEETV 101
Query: 113 RKLPCDHFYHTPCIEPWLQLHGTCPICRQTL 143
++PC H +H+ CI PWL +CP+CR L
Sbjct: 102 IEMPCHHLFHSNCILPWLSKTNSCPLCRHEL 132
>sp|Q0IJ20|RN145_XENTR RING finger protein 145 OS=Xenopus tropicalis GN=rnf145 PE=2 SV=1
Length = 695
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 76 STDKIKQIPVAHITKAQIDS-NLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHG 134
+ +KIK +PVA TK Q++ N CS+C++ ++ AV PC HF+H C++ WL +
Sbjct: 515 AVNKIKSLPVA--TKEQLEQHNDICSICYQD--MNSAVIT-PCSHFFHPGCLKKWLYVQE 569
Query: 135 TCPICRQTLHSESAESLGPAGA 156
TCP+C L S S ++ G +G+
Sbjct: 570 TCPLCHCQLKSLSQQATGESGS 591
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 75 LSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL-QLH 133
L+ +++KQIP K D C++C +++ + +R LPC H YH+ C++PWL Q
Sbjct: 208 LTKEQLKQIPTHDYQKG--DEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTR 265
Query: 134 GTCPICRQTLH 144
TCPIC+Q +H
Sbjct: 266 KTCPICKQPVH 276
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 75 LSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL-QLH 133
L+ +++KQIP K D C++C +++ + +R LPC H YH+ C++PWL Q
Sbjct: 208 LTKEQLKQIPTHDYQKG--DEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTR 265
Query: 134 GTCPICRQTLH 144
TCPIC+Q +H
Sbjct: 266 KTCPICKQPVH 276
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 73 PPLSTDKIKQIPVAHITKAQ--IDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL 130
PP S + I +P +T+ + + C +C ++ E +LPC H++H PC+ WL
Sbjct: 567 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 626
Query: 131 QLHGTCPICR 140
Q GTCP+CR
Sbjct: 627 QKSGTCPVCR 636
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 41 HFEGNPGDYAWGREGLDAIVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCS 100
+F D + R GLD V + P + +K+ + +L+C+
Sbjct: 81 YFRNRANDGSSRRGGLDNAVVESF--------PVFAYSSVKESKIG-------SKDLECA 125
Query: 101 VCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTLHSES 147
+C + E VR LP C+H +H CI+ WL H TCP+CR L ++S
Sbjct: 126 ICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKS 173
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 73 PPLSTDKIKQIPVAHITKAQ--IDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL 130
PP S + I +P + + I C +C ++ D+ +LPC HF+H PC+ WL
Sbjct: 606 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 665
Query: 131 QLHGTCPICRQ 141
Q GTCP+CR+
Sbjct: 666 QKSGTCPVCRR 676
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 73 PPLSTDKIKQIPVAHITKAQ--IDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL 130
PP S + I +P + + I C +C ++ D+ +LPC HF+H PC+ WL
Sbjct: 606 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 665
Query: 131 QLHGTCPICRQ 141
Q GTCP+CR+
Sbjct: 666 QKSGTCPVCRR 676
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 73 PPLSTDKIKQIPVAHITKAQ--IDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL 130
PP S + I +P + + I C +C ++ D+ +LPC HF+H PC+ WL
Sbjct: 605 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 664
Query: 131 QLHGTCPICRQ 141
Q GTCP+CR+
Sbjct: 665 QKSGTCPVCRR 675
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 73 PPLSTDKIKQIPVAHITKAQ--IDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL 130
PP S + I +P + + I C +C ++ D+ +LPC HF+H PC+ WL
Sbjct: 605 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 664
Query: 131 QLHGTCPICRQ 141
Q GTCP+CR+
Sbjct: 665 QKSGTCPVCRR 675
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 97 LQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTLHSESAE 149
L+C++C +F DE +R LP CDH +H CI WLQ H TCP+CR L ++ E
Sbjct: 122 LECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPE 175
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 80 IKQIPVAHITKAQ--IDSNLQ-CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTC 136
I Q+P+ + + ID + + C+VC E F + + +R LPC H +H CI+PWL H TC
Sbjct: 243 IGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRTC 302
Query: 137 PICR 140
P+C+
Sbjct: 303 PMCK 306
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 75 LSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLH 133
L++ ++ +P+ + L+CS+C + + R LP C+H +H CI+ W Q H
Sbjct: 103 LTSFELSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSH 162
Query: 134 GTCPICRQTLHSESAESLGPAGAGG 158
TCPICR T+ LGP A
Sbjct: 163 STCPICRNTV-------LGPEQASS 180
>sp|Q5BIY5|RN145_XENLA RING finger protein 145 OS=Xenopus laevis GN=rnf145 PE=2 SV=1
Length = 695
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 76 STDKIKQIPVAHITKAQIDS-NLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHG 134
+ +KIK +PV+ TK Q++ N CS+C++ ++ AV PC HF+H C++ WL +
Sbjct: 515 AVNKIKSLPVS--TKEQLEQHNDICSICYQD--MNSAVIT-PCSHFFHPGCLKKWLYVQE 569
Query: 135 TCPICRQTLHSESAESLGPAGA 156
TCP+C L S S +++ +G+
Sbjct: 570 TCPLCHCQLKSLSQQAVAESGS 591
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 75 LSTDKIKQIPVAHITKAQIDSNL-QCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQL 132
LS D ++++P ++ + + C++C + E R LP CDH +H C++ WL
Sbjct: 151 LSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIR 210
Query: 133 HGTCPICRQTL 143
HG+CPICRQ +
Sbjct: 211 HGSCPICRQAV 221
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 75 LSTDKIKQIPVAHITKAQIDSNLQ--CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQL 132
L+ ++I + H IDS L CSVC + +R+LPC H +H CI+ WL
Sbjct: 606 LTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE 665
Query: 133 HGTCPICRQ 141
+ TCPICRQ
Sbjct: 666 NCTCPICRQ 674
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 80 IKQIPVAHITKAQ--IDSNLQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTC 136
IK I V K ++S+ CSVC +F +E++R LP C+H +H PCI+ WL+ H C
Sbjct: 139 IKSITVYKYRKMDGFVESS-DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNC 197
Query: 137 PICRQTLHSESA 148
P+CR + + SA
Sbjct: 198 PLCRAFIVTSSA 209
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 99 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 140
C +C+E + ++ VR L C HF+H CI+PW+ HGTCPIC+
Sbjct: 256 CVICFEHYKPNDIVRILTCKHFFHKNCIDPWILSHGTCPICK 297
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 99 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 140
C +C+E + +E VR L C HF+H CI+PW+ HGTCP+C+
Sbjct: 256 CVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCK 297
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 99 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 140
C +C+E + +E VR L C HF+H CI+PW+ HGTCP+C+
Sbjct: 256 CVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCK 297
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 99 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 140
C +C+E++ ++ VR L C HF+H CI+PW+ HGTCPIC+
Sbjct: 256 CVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICK 297
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 59 IVTQLLNQMDGSGPPPLSTDKIKQIPVAHITKAQIDSNLQCSVCWEQFTLDEAVRKLPCD 118
++T+ + + L D++K++PV K D C++C E++ + +R LPC
Sbjct: 202 MITKFVQDRHRNRRNRLRKDQLKKLPVHKFKKG--DEYDVCAICLEEYEDGDKLRILPCS 259
Query: 119 HFYHTPCIEPWL-QLHGTCPICRQTL 143
H YH C++PWL + TCP+C+Q +
Sbjct: 260 HAYHCKCVDPWLTKTKKTCPVCKQKV 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,322,130
Number of Sequences: 539616
Number of extensions: 3045328
Number of successful extensions: 9026
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 8583
Number of HSP's gapped (non-prelim): 552
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)