BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5322
(476 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8AXN9|RPE65_CYNPY Retinoid isomerohydrolase OS=Cynops pyrrhogaster GN=RPE65 PE=2 SV=3
Length = 533
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 152/247 (61%), Gaps = 9/247 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELASPITAHVTGRIPVWLTGSLLRCGPGLFEVGSEQFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DNTLV+VYP+
Sbjct: 81 RRFIRTDTYVRAMTEKRIVITEFGTFAFPDPCKNIFSRFLSYFQGLEVTDNTLVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++NY+ +++P TL+T++K+DL V+I T+HPL +DG +N+G +
Sbjct: 141 EDYYACTETNYITKVNPETLETIKKVDLCNYVSINGVTAHPLIENDGTVYNIGNCFGKHF 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D D ++ K+V P +F P Y+H+F +TP+Y + VEQP+ I+
Sbjct: 201 SFAYNIVKIPPLQEDKEDPINKAKVVVQFPCSERFKPSYVHSFGLTPNYIVFVEQPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 335 RTAPTGKVRPSVICD---VGCETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKVNVQ 390
R+ T + P V+ + E P++N + G+ YT+ Y + ++ P L K+NV+
Sbjct: 396 RSDETIWLEPEVLFSGPRLAFEFPQINYKKFGGKDYTFAYGLG--LNHFVPDRLSKLNVK 453
Query: 391 NNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTR--VSLLVLNARTMQE 448
W + D YPSEP+FV+ P+A++ED+GV+LSV++ + P + LL+LNA+ M E
Sbjct: 454 TKEIWVWQEPDSYPSEPIFVSQPDAMEEDDGVVLSVIV-NPGPGQKPAFLLILNAKDMSE 512
Query: 449 LGRVNFTTPTPVPKCLHGWY 468
+ R PV HG Y
Sbjct: 513 IARAEVDINIPV--TFHGMY 530
>sp|Q9YI25|RPE65_AMBTI Retinoid isomerohydrolase OS=Ambystoma tigrinum GN=RPE65 PE=2 SV=3
Length = 533
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ PV V G IP W+ G L+R GPG + VG E F HLFD LLH+F+ G V Y
Sbjct: 21 ELVAPVTAQVTGRIPVWLSGSLLRCGPGLFEVGSEQFYHLFDGQALLHKFEFKGGHVIYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDTYVRAMTEKRIVITEFGTFAFPDPCKNIFSRFLSYFQGLEVTDNALVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++NY+ +I+P TL+T++K+DL V+I T+HP DG +N+G +
Sbjct: 141 EDYYACTETNYITKINPETLETVKKVDLCNYVSINGVTAHPHIEHDGTVYNIGNCFGKHF 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D D ++ K+V P +F P Y+H+F +TP+Y + VEQP+ I+
Sbjct: 201 AFAYNIVKIPPLQADKEDPINKAKVVVQFPCSERFKPSYVHSFGLTPNYIVFVEQPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 353 ETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N +H G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYKKHGGKDYTYAYGVG--LNHFVPDRLSKLNVKTKETWVWQEPDTYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + + LL+LNA+ M E+ R + PV HG +
Sbjct: 475 QPDAIEEDDGVVLSVVISPGEGQKPAFLLILNAKDMSEIARAEVDSNIPV--TFHGMF 530
>sp|A9C3R8|RP65C_DANRE Retinal Mueller cells isomerohydrolase OS=Danio rerio GN=rpe65c
PE=1 SV=1
Length = 532
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 154/251 (61%), Gaps = 10/251 (3%)
Query: 47 FRDCHTEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISS 106
F C E+ +P+ V G IP+W+ G L+R GPG + VG+E F HLFD LLH+F +
Sbjct: 16 FESCE-ELAEPIPAHVSGEIPAWLSGSLLRMGPGLFEVGDEPFYHLFDGQALLHKFDLKD 74
Query: 107 GLVTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLV 164
G VTY +FI++++Y++ +R+V+T FGT PDPC +IF R T F+ +DN LV
Sbjct: 75 GRVTYHRRFIRTDAYVRAMTEKRVVITEFGTTAYPDPCKNIFSRFFTYFQGIEVTDNCLV 134
Query: 165 SVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGV 224
++YPI + YA ++N++ ++DP TL+T++K+DL +++ T+HP +DG +N+G
Sbjct: 135 NIYPIGEDFYACTETNFITKVDPDTLETVKKVDLCNYLSVNGLTAHPHIEADGTVYNIGN 194
Query: 225 TL-RPTGPRYCILQL----NDVADH--RVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVE 277
+ Y I+++ D +D + K++ P +F P Y+H+F +T ++F+ VE
Sbjct: 195 CFGKNMSLAYNIVKIPPLQEDKSDQFEKSKILVQFPSSERFKPSYVHSFGITENHFVFVE 254
Query: 278 QPLSISVPRLI 288
P+ I++ + +
Sbjct: 255 TPVKINLLKFL 265
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 353 ETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N + G+ YT+ Y + ++ P + K+NV++ W + D YPSEP+FV
Sbjct: 417 EFPQINYSKFNGKDYTFAYGLG--LNHFVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQ 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 470
+P+A ED+GVLLS+++ R + LL+L A + E+ R PV LHG Y P
Sbjct: 475 SPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAEVDVLIPV--TLHGIYKP 532
>sp|Q6PBW5|RP65A_DANRE Retinoid isomerohydrolase OS=Danio rerio GN=rpe65a PE=2 SV=1
Length = 531
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 152/245 (62%), Gaps = 9/245 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+++P+ TV G IPS+I G L+R GPG + G E F HLFD L+H+F S+G VTY
Sbjct: 21 ELNEPLPATVTGRIPSFIKGSLLRLGPGLFEAGAEPFYHLFDGQALMHKFDFSNGQVTYF 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
KF+K+++Y++ +R+V+T FGT PDPC +IF R + FK +DN LV+VYPI
Sbjct: 81 RKFVKTDAYVRAITEKRVVITEFGTCAYPDPCKNIFSRFFSYFKGVEVTDNCLVNVYPIG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA+ ++NY+ +++ TL+TL+K+D+ V I T+HP DG +N+G + +
Sbjct: 141 EDFYAVTETNYITKVNVDTLETLKKVDMCNYVNINGVTAHPHIERDGTVYNIGNCMGKGA 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D +D + K+V P +F P Y+H+F MT +YF+ VE P+ I+
Sbjct: 201 SLAYNIVRIPPTQKDKSDPIEKSKVVVQFPSAERFKPSYVHSFGMTENYFVFVETPVKIN 260
Query: 284 VPRLI 288
+ + +
Sbjct: 261 LLKFL 265
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 353 ETPRMNGQH-QGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N + G+ YTY Y + ++ P + K+NV+ W + D YPSEP+FV
Sbjct: 417 EFPQINYRMVNGKNYTYAYGLG--LNHFVPDRICKLNVRTKETWVWQEPDSYPSEPLFVQ 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 470
TP+ V ED+G+L+++++ L+LNA+ + E+ R TPV HG Y P
Sbjct: 475 TPDGVDEDDGILMTIVVSPGAQRPTYCLILNAKDLSEIARAEVEILTPV--TFHGMYKP 531
>sp|Q9YGX2|RPE65_CHICK Retinoid isomerohydrolase OS=Gallus gallus GN=RPE65 PE=1 SV=1
Length = 533
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 151/247 (61%), Gaps = 9/247 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ PV V G IP+W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPVTAHVTGRIPTWLRGSLLRCGPGLFEVGAEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+F+++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV+VYP+
Sbjct: 81 RRFVRTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL + V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D D ++ ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SLAYNIIRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LLKFLSS 267
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 332 ASPRTAPTGKVRPSVICDV---GCETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKV 387
A+ R+ T + P VI E P++N ++ G+PYTY Y + ++ P L K+
Sbjct: 393 ATLRSDETVWLEPEVIFSGPRHAFEFPQINYKKYGGKPYTYTYGLG--LNHFVPDRLCKL 450
Query: 388 NVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLW-SHHPTRVSLLVLNARTM 446
NV+ W + D YPSEP+FV+ P+A++ED+GV+LS+++ P LL+LNA+ M
Sbjct: 451 NVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDM 510
Query: 447 QELGRVNFTTPTPVPKCLHGWY 468
E+ R PV HG +
Sbjct: 511 SEVARAEVEVNIPV--TFHGLF 530
>sp|A9C3R9|RP65B_DANRE All-trans-retinyl ester 13-cis isomerohydrolase OS=Danio rerio
GN=rpe65b PE=1 SV=1
Length = 532
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 152/251 (60%), Gaps = 10/251 (3%)
Query: 47 FRDCHTEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISS 106
F C E+ +P+ V G IP+W+ G L+R GPG + +G+E F+HLFD L+H+F +
Sbjct: 16 FESCE-ELAEPIPAHVSGKIPAWLSGSLLRMGPGLFEIGDEPFNHLFDGQALIHKFDLKD 74
Query: 107 GLVTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG--SDNTLV 164
G VTY KFI++++Y++ +R+V+T GT PDPC +IF R T F+ +DN V
Sbjct: 75 GRVTYHRKFIRTDAYVRAMTEKRVVITELGTAAYPDPCKNIFSRFFTYFQGTEVTDNCSV 134
Query: 165 SVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGV 224
++YPI + YA ++N++ +++P TL+T++K+DL +++ T+HP +DG +N+G
Sbjct: 135 NIYPIGEDFYACTETNFITKVNPDTLETIKKVDLCNYLSVNGLTAHPHIEADGTVYNIGN 194
Query: 225 TL-RPTGPRYCILQLNDVADHR------VKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVE 277
+ Y I+++ + + + K++ P +F P Y+H+F MT ++F+ VE
Sbjct: 195 CFGKNMSLAYNIVKIPPLQEEKSDPLAMSKVLVQFPSSERFKPSYVHSFGMTENHFVFVE 254
Query: 278 QPLSISVPRLI 288
P+ I++ + +
Sbjct: 255 TPVKINLLKFL 265
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 353 ETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N + G+ YT+ Y + ++ P + K+NV++ W + D YPSEP+FV
Sbjct: 417 EFPQINYSKFNGKDYTFAYGLG--LNHFVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQ 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 470
+P+A ED+GVLLS+++ R + LL+L A + E+ R +P LHG Y P
Sbjct: 475 SPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAE--VDVLIPLTLHGIYKP 532
>sp|Q91ZQ5|RPE65_MOUSE Retinoid isomerohydrolase OS=Mus musculus GN=Rpe65 PE=1 SV=3
Length = 533
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFKGVEVTDNALVNIYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL +++ T+HP SDG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYISVNGATAHPHIESDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D D ++ ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 TVAYNIIKIPPLKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 332 ASPRTAPTGKVRPSVICD---VGCETPRMNGQH-QGRPYTYFYAISADIDRDNPGTLIKV 387
A+ R+ T + P V+ E P++N Q G+PYTY Y + ++ P L K+
Sbjct: 393 ATLRSDETIWLEPEVLFSGPRQAFEFPQINYQKFGGKPYTYAYGLG--LNHFVPDKLCKL 450
Query: 388 NVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTR-VSLLVLNARTM 446
NV+ W + D YPSEP+FV+ P+A++ED+GV+LSV++ + LLVLNA+ +
Sbjct: 451 NVKTKEIWMWQEPDSYPSEPIFVSQPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDL 510
Query: 447 QELGRVNFTTPTPVPKCLHGWY 468
E+ R T PV HG +
Sbjct: 511 SEIARAEVETNIPV--TFHGLF 530
>sp|Q9TVB8|RPE65_CANFA Retinoid isomerohydrolase OS=Canis familiaris GN=RPE65 PE=1 SV=3
Length = 533
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 148/247 (59%), Gaps = 9/247 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D D + ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SIAYNIVKIPPLQADKEDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LLKFLSS 267
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 332 ASPRTAPTGKVRPSVICD---VGCETPRMNGQHQG-RPYTYFYAISADIDRDNPGTLIKV 387
A+ R+ T + P V+ E P++N Q G +PYTY Y + ++ P L K+
Sbjct: 393 ATLRSDETIWLEPEVLFSGPRQAFEFPQINYQKSGGKPYTYAYGLG--LNHFVPDRLCKL 450
Query: 388 NVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTR-VSLLVLNARTM 446
NV+ W + D YPSEP+FV+ P+A++ED+GV+LSV++ + LL+LNA+ +
Sbjct: 451 NVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDL 510
Query: 447 QELGRVNFTTPTPVPKCLHGWY 468
E+ R PV HG +
Sbjct: 511 SEVARAEVEINIPV--TFHGLF 530
>sp|Q16518|RPE65_HUMAN Retinoid isomerohydrolase OS=Homo sapiens GN=RPE65 PE=1 SV=3
Length = 533
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 148/247 (59%), Gaps = 9/247 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D D + ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 353 ETPRMNGQ-HQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q + G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKYCGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPV--TFHGLF 530
>sp|O70276|RPE65_RAT Retinoid isomerohydrolase OS=Rattus norvegicus GN=Rpe65 PE=2 SV=3
Length = 533
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 149/247 (60%), Gaps = 9/247 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSTPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYY 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL V++ T+HP SDG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIESDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D D ++ ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 TVAYNIIKIPPLKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 353 ETPRMNGQH-QGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKCGGKPYTYAYGLG--LNHFVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + LLVLNA+ + E+ R T PV HG +
Sbjct: 475 QPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSEIARAEVETNIPV--TFHGLF 530
>sp|Q9XT71|RPE65_CHLAE Retinoid isomerohydrolase OS=Chlorocebus aethiops GN=RPE65 PE=2
SV=3
Length = 533
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 148/247 (59%), Gaps = 9/247 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D D + ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 353 ETPRMNGQ-HQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q + G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKYCGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPV--TFHGLF 530
>sp|Q9I993|BCDO1_CHICK Beta,beta-carotene 15,15'-monooxygenase OS=Gallus gallus GN=BCMO1
PE=1 SV=1
Length = 526
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 56 QPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 115
+P++ V+G +P+W+ GVL+RNGPG +G+ ++H FD LLH F +G V Y+ K+
Sbjct: 14 EPIKAEVQGQLPTWLQGVLLRNGPGMHTIGDTKYNHWFDGLALLHSFTFKNGEVYYRSKY 73
Query: 116 IKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQR----IATLFKPGSDNTLVSVYPIQD 171
++S++Y N A RIVV+ FGT PDPC +IF + ++ +DN L+++ D
Sbjct: 74 LRSDTYNCNIEANRIVVSEFGTMAYPDPCKNIFAKAFSYLSHTIPEFTDNCLINIMKTGD 133
Query: 172 QVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG- 230
YA ++N++ +IDP TL+TL+K+D ++ V + TSHP S G N+G ++ G
Sbjct: 134 DYYATSETNFIRKIDPQTLETLDKVDYSKYVAVNLATSHPHYDSAGNILNMGTSIVDKGR 193
Query: 231 PRYCILQLNDVADHRVK---------LVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLS 281
+Y + ++ + K +V S+P R P Y H+F +T +Y + +EQP
Sbjct: 194 TKYVLFKIPSSVPEKEKKKSCFKHLEVVCSIPSRSLLQPSYYHSFGITENYIVFIEQPFK 253
Query: 282 ISVPRLIKNSVTNRPLATCLKF 303
+ + +L + A+CL F
Sbjct: 254 LDIVKLATAYIRGVNWASCLSF 275
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 343 RPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDV 402
+P ++C+ G E PR+N + G+ Y Y YA P + K+NVQ W +
Sbjct: 394 QPEILCE-GIELPRVNYDYNGKKYKYVYATEVQWS-PVPTKIAKLNVQTKEVLHWGEDHC 451
Query: 403 YPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPK 462
+PSEP+FV +P+A +EDEGV+L+ ++ S LL+L+A+T +ELGR +
Sbjct: 452 WPSEPIFVPSPDAREEDEGVVLTCVVVSEPNKAPFLLILDAKTFKELGRATVNVEMHLD- 510
Query: 463 CLHGWYFPH 471
LHG + P
Sbjct: 511 -LHGMFIPQ 518
>sp|Q99NF1|BCDO2_MOUSE Beta,beta-carotene 9',10'-oxygenase OS=Mus musculus GN=Bco2 PE=1
SV=1
Length = 532
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 151/265 (56%), Gaps = 9/265 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E V V G IP W++G L+R GPG + G++ ++H FD LLH+F++ G VTY+
Sbjct: 20 ETLSAVSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFRMERGTVTYK 79
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKP--GSDNTLVSVYPIQ 170
KF++S++Y N A RIV++ FGT +PDPC SIF+R + F+P +DNT V+ +
Sbjct: 80 SKFLQSDTYKANSAGGRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTNVNFVQYK 139
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG 230
Y ++N+M+++D L+ EK+D ++ + + T+HP DG +N+G + P G
Sbjct: 140 GDYYMSTETNFMNKVDIEMLERTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSYGPRG 199
Query: 231 PRYCILQLNDVAD------HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISV 284
Y I+++ H +++ S+ K P Y H+F MT +Y I VEQP+ + +
Sbjct: 200 SCYNIIRVPPKKKEPGETIHGAQVLCSIASTEKMKPSYYHSFGMTKNYIIFVEQPVKMKL 259
Query: 285 PRLIKNSVTNRPLATCLKFFEKQSN 309
++I + + +P A + +E Q N
Sbjct: 260 WKIITSKIRGKPFADGIS-WEPQYN 283
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++N G+ G+ Y++FY R G +LIKV+V N T + W ++ YPSEPV
Sbjct: 415 GIEFPQINYGRFNGKKYSFFYGCGF---RHLVGDSLIKVDVTNKTLRVWREEGFYPSEPV 471
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV P A +ED GV+LSV++ + LLVL+A++ ELGR P +P HG +
Sbjct: 472 FVPVPGADEEDSGVILSVVITPNQSESNFLLVLDAKSFTELGRAE--VPVQMPYGFHGTF 529
Query: 469 FP 470
P
Sbjct: 530 VP 531
>sp|Q28175|RPE65_BOVIN Retinoid isomerohydrolase OS=Bos taurus GN=RPE65 PE=1 SV=3
Length = 533
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 148/247 (59%), Gaps = 9/247 (3%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +++P TL+T++++DL V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKVNPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D D + ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 353 ETPRMNGQ-HQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q + G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKYGGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPV--TFHGLF 530
>sp|Q9JJS6|BCDO1_MOUSE Beta,beta-carotene 15,15'-monooxygenase OS=Mus musculus GN=Bcmo1
PE=1 SV=2
Length = 566
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 151/283 (53%), Gaps = 16/283 (5%)
Query: 45 VWFRDCHTEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKI 104
+ F E +PVQ V G IP+W+ G L+RNGPG VGE ++H FD LLH F I
Sbjct: 3 IIFGQNKKEQLEPVQAKVTGSIPAWLQGTLLRNGPGMHTVGESKYNHWFDGLALLHSFSI 62
Query: 105 SSGLVTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG----SD 160
G V Y+ K+++S++YI N A RIVV+ FGT PDPC +IF + + +D
Sbjct: 63 RDGEVFYRSKYLQSDTYIANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTD 122
Query: 161 NTLVSVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETF 220
N L+++ + YA ++NY+ +IDP TL+TLEK+D + V + TSHP G
Sbjct: 123 NCLINIMKCGEDFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVL 182
Query: 221 NLGVTLRPTG-PRYCILQL-NDVADHRVK---------LVTSVPVRWKFHPGYMHTFAMT 269
N+G ++ G +Y I ++ V D + K + S+ R P Y H+F +T
Sbjct: 183 NMGTSVVDKGRTKYVIFKIPATVPDSKKKGKSPVKHAEVFCSISSRSLLSPSYYHSFGVT 242
Query: 270 PHYFIIVEQPLSISVPRLIKNSVTNRPLATCLKF-FEKQSNIH 311
+Y + +EQP + + ++ + A+C+ F E ++ IH
Sbjct: 243 ENYVVFLEQPFKLDILKMATAYMRGVSWASCMSFDREDKTYIH 285
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 297 LATCLKFFEKQSNIHSTPRYAQMFRARPLRFRLDL--------ASPRTAPTGK------- 341
LA K FE++S + S P + A PL D S TA K
Sbjct: 337 LANLNKDFEEKSRLTSVPTLRRF--AVPLHVDKDAEVGSNLVKVSSTTATALKEKDGHVY 394
Query: 342 VRPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKD 401
+P V+ + G E PR+N + G+PY Y +A P ++K ++ + WS++
Sbjct: 395 CQPEVLYE-GLELPRINYAYNGKPYRYIFAAEVQW-SPVPTKILKYDILTKSSLKWSEES 452
Query: 402 VYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPV 460
+P+EP+FV TP A ED+GV+LS ++ S P ++ LL+L+A++ EL R + +
Sbjct: 453 CWPAEPLFVPTPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELARASVDADMHL 511
Query: 461 PKCLHGWYFP 470
LHG + P
Sbjct: 512 D--LHGLFIP 519
>sp|Q9HAY6|BCDO1_HUMAN Beta,beta-carotene 15,15'-monooxygenase OS=Homo sapiens GN=BCMO1
PE=1 SV=1
Length = 547
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 146/272 (53%), Gaps = 16/272 (5%)
Query: 56 QPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 115
+PV+ V G IP+W+ G L+RNGPG VGE ++H FD LLH F I G V Y+ K+
Sbjct: 14 EPVRAKVTGKIPAWLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFTIRDGEVYYRSKY 73
Query: 116 IKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG----SDNTLVSVYPIQD 171
++S++Y N A RIVV+ FGT PDPC +IF + + +DN L+++ +
Sbjct: 74 LRSDTYNTNIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMKCGE 133
Query: 172 QVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGP 231
YA ++NY+ +I+P TL+TLEK+D + V + TSHP G N+G ++ G
Sbjct: 134 DFYATSETNYIRKINPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIVEKGK 193
Query: 232 -RYCILQLNDVADHRVK----------LVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
+Y I ++ K + S+P R P Y H+F +T +Y I +EQP
Sbjct: 194 TKYVIFKIPATVPEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPF 253
Query: 281 SISVPRLIKNSVTNRPLATCLKFF-EKQSNIH 311
+ + ++ + A+CL F E+++ IH
Sbjct: 254 RLDILKMATAYIRRMSWASCLAFHREEKTYIH 285
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 351 GCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFV 410
G E PR+N H G+ Y Y +A P +IK ++ + W + D +P+EP+FV
Sbjct: 403 GLELPRVNYAHNGKQYRYVFATGVQWS-PIPTKIIKYDILTKSSLKWREDDCWPAEPLFV 461
Query: 411 ATPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVN 453
P A ED+GV+LS ++ S P ++ LL+L+A++ EL R +
Sbjct: 462 PAPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELARAS 504
>sp|Q91XT5|BCDO1_RAT Beta,beta-carotene 15,15'-monooxygenase OS=Rattus norvegicus
GN=Bcmo1 PE=2 SV=1
Length = 566
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 147/272 (54%), Gaps = 16/272 (5%)
Query: 56 QPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 115
+P++ TV G IP+W+ G L+RNGPG VG+ ++H FD LLH F I G V Y+ K+
Sbjct: 14 EPLRATVTGSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSIRDGEVFYRSKY 73
Query: 116 IKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG----SDNTLVSVYPIQD 171
++S++Y N A RIVV+ FGT PDPC +IF + + +DN L+++ +
Sbjct: 74 LQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMKCGE 133
Query: 172 QVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPT-G 230
YA ++NY+ +IDP TL+TLEK+D + V + TSHP G N+G ++ G
Sbjct: 134 DFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIADKGG 193
Query: 231 PRYCILQLNDVADHRVK----------LVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
+Y + ++ A K + S+P R P Y H+F +T +Y + +EQP
Sbjct: 194 TKYVMFKIPATAPGSKKKGKNPLKHSEVFCSIPSRSLLSPSYYHSFGVTENYVVFLEQPF 253
Query: 281 SISVPRLIKNSVTNRPLATCLKFF-EKQSNIH 311
+ + ++ + A+C+ F E ++ IH
Sbjct: 254 KLDILKMATAYMRGVSWASCMTFCKEDKTYIH 285
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 297 LATCLKFFEKQSNIHSTPRYAQMFRARPLRFRLDL--------ASPRTAPTGK------- 341
LA K FE++S + S P + A PL D S TA K
Sbjct: 337 LANLNKDFEEKSRLTSVPTLRRF--AVPLHVDKDAEVGSNLVKVSSTTATALKEKDDHVY 394
Query: 342 VRPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKD 401
+P V+ + G E PR+N H G+PY Y +A P ++K +V + WS++
Sbjct: 395 CQPEVLYE-GLELPRINYAHNGKPYRYIFAAEVQW-SPVPTKILKYDVLTKSSLKWSEES 452
Query: 402 VYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVP 461
+P+EP+FV TP A ED+GV+LS ++ + LL+L+A++ EL R + +
Sbjct: 453 CWPAEPLFVPTPGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTELARASVDVDMHLD 512
Query: 462 KCLHGWYFP 470
LHG + P
Sbjct: 513 --LHGLFIP 519
>sp|Q5RF16|BCDO2_PONAB Beta,beta-carotene 9',10'-oxygenase OS=Pongo abelii GN=BCO2 PE=2
SV=1
Length = 557
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 156/269 (57%), Gaps = 13/269 (4%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY+
Sbjct: 40 EAPRGISARVRGHFPKWLNGSLLRTGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYR 99
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVSV 166
KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+ PG +DNT V+
Sbjct: 100 SKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNY 159
Query: 167 YPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL 226
+ Y ++N+M+++D TL+ EK+D ++ + + T+HP DG +N+G +
Sbjct: 160 VRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSF 219
Query: 227 RPTGPRYCILQLN----DVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
P G Y ++++ D+ + H +++ S+ K P Y H+F MT +Y I +EQPL
Sbjct: 220 GPYGFSYKVIRVPPEKVDLGETIHGAQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPL 279
Query: 281 SISVPRLIKNSVTNRPLATCLKFFEKQSN 309
+++ ++ + + + + + +E Q N
Sbjct: 280 KMNLWKIATSKIRGKAFSDGIS-WEPQCN 307
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISAD--IDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEP 407
G E P++ Q G+ Y +FY + D +LIKV+V N T K W + YPSEP
Sbjct: 439 GIEFPQIYYDQFSGKKYHFFYGCGFRHLVGGD---SLIKVDVVNKTLKVWREDGFYPSEP 495
Query: 408 VFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGW 467
VFV P +ED GV+LSV++ + LLVL+A+ ELGR P +P HG
Sbjct: 496 VFVPAPGTNEEDGGVILSVVITPNQNESNFLLVLDAKNFGELGRAE--VPVQMPYGFHGT 553
Query: 468 YFP 470
+ P
Sbjct: 554 FIP 556
>sp|Q9BYV7|BCDO2_HUMAN Beta,beta-carotene 9',10'-oxygenase OS=Homo sapiens GN=BCO2 PE=1
SV=5
Length = 579
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 157/269 (58%), Gaps = 13/269 (4%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY+
Sbjct: 63 EAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYR 122
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVSV 166
KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+ PG +DNT V+
Sbjct: 123 SKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNY 182
Query: 167 YPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL 226
+ Y ++N+M+++D TL+ EK+D ++ + + T+HP DG +N+G +
Sbjct: 183 VRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGNSF 242
Query: 227 RPTGPRYCILQLN----DVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
P G Y ++++ D+ + H V+++ S+ K P Y H+F MT +Y I +EQPL
Sbjct: 243 GPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPL 302
Query: 281 SISVPRLIKNSVTNRPLATCLKFFEKQSN 309
+++ ++ + + + + + +E Q N
Sbjct: 303 KMNLWKIATSKIRGKAFSDGIS-WEPQCN 330
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++ + G+ Y +FY R G +LIKV+V N T K W + YPSEPV
Sbjct: 462 GIEFPQIYYDRFSGKKYHFFYGCGF---RHLVGDSLIKVDVVNKTLKVWREDGFYPSEPV 518
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV P +ED GV+LSV++ + +LVL+A+ +ELGR P +P HG +
Sbjct: 519 FVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAE--VPVQMPYGFHGTF 576
Query: 469 FP 470
P
Sbjct: 577 IP 578
>sp|Q8HXG8|BCDO2_MACFA Beta,beta-carotene 9',10'-oxygenase OS=Macaca fascicularis GN=BCO2
PE=2 SV=2
Length = 556
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 153/269 (56%), Gaps = 13/269 (4%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY+
Sbjct: 40 EAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYR 99
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVSV 166
KF++S++Y N A RIV++ FGT PDPC ++F+R + F+ PG +DNT V+
Sbjct: 100 SKFLQSDTYKANSAKNRIVMSEFGTLATPDPCKNVFERFMSRFELPGKAAAMTDNTNVNY 159
Query: 167 YPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL 226
+ Y ++N+M+++D TL+ EK+D ++ + + T+HP DG +N+G +
Sbjct: 160 VRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSF 219
Query: 227 RPTGPRYCILQLN------DVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
P G Y ++++ + H +++ S+ K P Y H+F MT +Y I +EQPL
Sbjct: 220 GPFGFSYKVIRVPPEKVDLEETTHGAQVICSIAPTEKGKPSYYHSFGMTRNYIIFIEQPL 279
Query: 281 SISVPRLIKNSVTNRPLATCLKFFEKQSN 309
+++ ++ + + + + + +E Q N
Sbjct: 280 KMNLWKIATSKIRGKAFSDGIS-WEPQCN 307
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++ GQ G+ Y +FY R G +LIKV+V N T K W + YPSEPV
Sbjct: 439 GIEFPQIYYGQFSGKKYRFFYGCGF---RHLVGDSLIKVDVVNKTLKVWREDGFYPSEPV 495
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV P +ED GV+LSV++ + LLVL+A+ +ELGR P +P HG +
Sbjct: 496 FVPVPGTNEEDGGVILSVVITPNQNESNFLLVLDAKNFEELGRAE--VPVQMPYGFHGTF 553
Query: 469 FP 470
P
Sbjct: 554 IP 555
>sp|P74334|ACOX_SYNY3 Apocarotenoid-15,15'-oxygenase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1541 PE=1 SV=1
Length = 490
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 192/475 (40%), Gaps = 97/475 (20%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKI-SSGLVTYQCKFIKSES 120
VEG IP + G L RNGPG +G+ H FD G++ FK G V +Q KF++++
Sbjct: 38 VEGSIPPDLQGTLYRNGPGLLEIGDRPLKHPFDGDGMVTAFKFPGDGRVHFQSKFVRTQG 97
Query: 121 YIKNHAARRIVVTG-FGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGDS 179
Y++ A +++ G FG++ P + I L NT ++ + D++ AL +
Sbjct: 98 YVEEQKAGKMIYRGVFGSQ----PAGGWLKTIFDLRLKNIANTNITYW--GDRLLALWEG 151
Query: 180 NYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCILQLN 239
HR++P+ L T+ DL + S TF+ G P Y +
Sbjct: 152 GQPHRLEPSNLATIGLDDLGGILAEGQPLSAHPRIDPASTFDGGQ------PCYVTFSIK 205
Query: 240 DVA---------DHRVKLVTSVPVRWKFHPG--YMHTFAMTPHYFIIVEQPLSIS-VPRL 287
D + KL+ + + PG ++H FA+TPHY I ++ ++++ +P L
Sbjct: 206 SSLSSTLTLLELDPQGKLLRQ---KTETFPGFAFIHDFAITPHYAIFLQNNVTLNGLPYL 262
Query: 288 IKNSVTNRPLATCLKFF-EKQSNIHSTPRYAQMFRARPL--------------------- 325
R C++F +K + I PR + P+
Sbjct: 263 FG----LRGAGECVQFHPDKPAQIILVPRDGGEIKRIPVQAGFVFHHANAFEENGKIILD 318
Query: 326 ------------------------------RFRLDLASPRTAPTGKVRPSVICDVGCETP 355
RF +D A+ V ++ CE P
Sbjct: 319 SICYNSLPQVDTDGDFRSTNFDNLDPGQLWRFTIDPAA------ATVEKQLMVSRCCEFP 372
Query: 356 RMNGQHQGRPYTYFYAISADIDRDNP--GTLIKVNVQNN--TCKSWSQKDVYPSEPVFVA 411
++ Q GRPY Y Y +A N ++KV++++ T +S++ + EP+FV
Sbjct: 373 VVHPQQVGRPYRYVYMGAAHHSTGNAPLQAILKVDLESGTETLRSFAPHG-FAGEPIFVP 431
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHG 466
P V ED+G LL L++ R L++L+A+ + +P LHG
Sbjct: 432 RPGGVAEDDGWLL-CLIYKADLHRSELVILDAQDITAPAIATLKLKHHIPYPLHG 485
>sp|Q8VY26|CCD8_ARATH Carotenoid cleavage dioxygenase 8, chloroplastic OS=Arabidopsis
thaliana GN=CCD8 PE=1 SV=1
Length = 570
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 24/264 (9%)
Query: 48 RDCH---TEVDQP---VQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHR 101
R CH T V Q + TV+G IP+W++G +RNGPG WN+G+ F HLFD L +
Sbjct: 77 RRCHVAWTSVQQENWEGELTVQGKIPTWLNGTYLRNGPGLWNIGDHDFRHLFDGYSTLVK 136
Query: 102 FKISSGLVTYQCKFIKSESYIKNHAARRIVVTGFGTR-----FVPDPCASIFQRIATLFK 156
+ G + + ++S++Y R+ F +P + I + I LF
Sbjct: 137 LQFDGGRIFAAHRLLESDAYKAAKKHNRLCYREFSETPKSVIINKNPFSGIGE-IVRLFS 195
Query: 157 PGS--DNTLVSVYPIQD-QVYALGDSNYMH-RIDPATLDTLEKMDLARDVTILH--QTSH 210
S DN V + D +V L ++ +D TL+T+ K + DV H Q++H
Sbjct: 196 GESLTDNANTGVIKLGDGRVMCLTETQKGSILVDHETLETIGKFEY-DDVLSDHMIQSAH 254
Query: 211 PLTTSDGETFNLGVTLRPTGPRYCILQLNDVADHRVKLVTSVPVR-WKFHPGYMHTFAMT 269
P+ T + E + L L P Y ++++ ++ R ++V V R + PG++H+FA+T
Sbjct: 255 PIVT-ETEMWTLIPDL--VKPGYRVVRMEAGSNKR-EVVGRVRCRSGSWGPGWVHSFAVT 310
Query: 270 PHYFIIVEQPLSISVPRLIKNSVT 293
+Y +I E PL SV L++ T
Sbjct: 311 ENYVVIPEMPLRYSVKNLLRAEPT 334
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 322 ARPLRFRLDLASPRTAPTGKVRPSVICDV---GCETPRMNGQHQGRPYTYFYAISADIDR 378
AR RFR+ L + GK+ +V + + +N + G+ Y Y YA A
Sbjct: 424 ARIGRFRIPLDGSKY---GKLETAVEAEKHGRAMDMCSINPLYLGQKYRYVYACGAQRPC 480
Query: 379 DNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSL 438
+ P L KV++ K+W + + PSEP FV P A ED+GV++S++ S
Sbjct: 481 NFPNALSKVDIVEKKVKNWHEHGMIPSEPFFVPRPGATHEDDGVVISIV--SEENGGSFA 538
Query: 439 LVLNARTMQELGRVNFTTPTPVPKCLHGWYFPHE 472
++L+ + +E+ R F P +P LHG + P +
Sbjct: 539 ILLDGSSFEEIARAKF--PYGLPYGLHGCWIPKD 570
>sp|O49675|CCD4_ARATH Probable carotenoid cleavage dioxygenase 4, chloroplastic
OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1
Length = 595
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 24/240 (10%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 121
+ G +P ++G IRNGP + + HLFD G+LH KI +G T +++K+ Y
Sbjct: 130 IHGTLPLSLNGAYIRNGPNPQFLPRGPY-HLFDGDGMLHAIKIHNGKATLCSRYVKTYKY 188
Query: 122 -IKNHAARRI---VVTGFG--TRFVPDPCASIFQRIATLFKP----GSDNTLVSVYPIQD 171
++ + V +GF T V + + + + P G NT ++ + +
Sbjct: 189 NVEKQTGAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFF--SN 246
Query: 172 QVYALGDSNYMHRI---DPATLDTLEKMDLARDVTILHQTSHPLTTS-DGETFNLGVTLR 227
+++ALG+S+ + + + ++T+ + D + + T+HP T GETF
Sbjct: 247 RLFALGESDLPYAVRLTESGDIETIGRYDFDGKLA-MSMTAHPKTDPITGETF--AFRYG 303
Query: 228 PTGPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRL 287
P P + + K VP+ P ++H FA+T + I E L + + L
Sbjct: 304 PVPPFLTYFRFDSAG----KKQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNML 359
>sp|O49505|NCED2_ARATH 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1
Length = 583
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 61 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 120
TVEG IP IDGV IRNG + HLFD G++H KI++G +Y C+F K+E
Sbjct: 123 TVEGTIPDCIDGVYIRNGANPM-FEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTER 181
Query: 121 YIKNHAARRIV 131
++ R V
Sbjct: 182 LVQEKRLGRPV 192
>sp|Q8LP17|CCD1_PEA Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum
GN=CCD1 PE=2 SV=1
Length = 541
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 26/269 (9%)
Query: 61 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKS-- 118
TV+G +P ++G +R GP + H FD G++H +I G +Y +F+K+
Sbjct: 66 TVQGHLPDCLNGEFVRVGPNPKFSPVAGY-HWFDGDGMIHGLRIKDGKASYVSRFVKTSR 124
Query: 119 ---ESYIKNHAARRI--VVTGFGTRFVPDPCASIFQRIATL-FKPGSDNTLVSVYPIQDQ 172
E Y +I + FG V +I + + G+ NT + + +
Sbjct: 125 FKQEEYFNGSKFMKIGDLKGLFGLLMVNMQMLRAKLKILDVSYGHGTANTALVYHHQKLL 184
Query: 173 VYALGDSNYMHRI-DPATLDTLEKMDLARDVTILHQ-TSHP-LTTSDGETFNLGVTLRPT 229
+ GD Y ++ + L TL +D D + H T+HP + GE F G +
Sbjct: 185 ALSEGDKPYAIKVFEDGDLQTLGMLDY--DKRLGHNFTAHPKVDPFTGEMFTFGYSHTAP 242
Query: 230 GPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLIK 289
Y ++ + V + S PV MH FA+T +Y I ++ PL ++K
Sbjct: 243 YVTYRVISKDGFMQDPVPITISDPVM-------MHDFAITENYSIFMDLPLYFRPKEMVK 295
Query: 290 NSVTNRPLATCLKFFEKQSNIHSTPRYAQ 318
N + K++ PRYA+
Sbjct: 296 NKTLIFSFDST-----KKARFGVLPRYAK 319
>sp|Q94IR2|CCD1_PHAVU Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus
vulgaris GN=CCD1 PE=1 SV=1
Length = 543
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 32/271 (11%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFI----- 116
V+G +P ++G +R GP + H FD G++H +I G TY +F+
Sbjct: 69 VKGHLPDCLNGEFVRVGPNPKFAPVAGY-HWFDGDGMIHGLRIKDGKATYVSRFVETSRL 127
Query: 117 KSESYIKNHAARRI--VVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVY 174
K E Y +I + FG V ++ L G VY ++
Sbjct: 128 KQEEYFGRSKFMKIGDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTTNTALVYH-HGKLL 186
Query: 175 ALGDSNYMHRI---DPATLDTLEKMDLARDVTILHQ-TSHP-LTTSDGETFNLGVTLRPT 229
AL +++ + I + L TL +D D + H T+HP + GE F+ G P
Sbjct: 187 ALSEADKPYAIKVFEDGDLQTLGMLDY--DKRLGHSFTAHPKVDPFTGEMFSFGYAHTPP 244
Query: 230 GPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLIK 289
Y ++ + V + S P+ MH FA+T +Y + ++ PL ++K
Sbjct: 245 YITYRVISKDGYMHDPVPITISDPIM-------MHDFAITENYAVFMDLPLIFRPKEMVK 297
Query: 290 NSVTNRPLATCLKFFE--KQSNIHSTPRYAQ 318
N T + F+ K++ PRYA+
Sbjct: 298 NK-------TLIFSFDSTKKARFGVLPRYAK 321
>sp|O65572|CCD1_ARATH Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis
thaliana GN=CCD1 PE=1 SV=2
Length = 538
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/479 (19%), Positives = 170/479 (35%), Gaps = 81/479 (16%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 121
V G +P ++G +R GP + H FD G++H +I G TY +++K+
Sbjct: 67 VHGFLPECLNGEFVRVGPNPKFDAVAGY-HWFDGDGMIHGVRIKDGKATYVSRYVKTSRL 125
Query: 122 IKNH--AARRIVVTG-----FGTRFVP-DPCASIFQRIATLFKPGSDNTLVSVYPIQDQV 173
+ A + + G FG V + + + + G+ NT + + +
Sbjct: 126 KQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTALVYHHGKLLA 185
Query: 174 YALGDSNYMHRI-DPATLDTLEKMDLARDVTILHQ-TSHP-LTTSDGETFNLGVTLRPTG 230
D Y+ ++ + L TL +D + +T H T+HP + GE F G + P
Sbjct: 186 LQEADKPYVIKVLEDGDLQTLGIIDYDKRLT--HSFTAHPKVDPVTGEMFTFGYSHTPPY 243
Query: 231 PRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS------- 283
Y ++ + + V + S P+ MH FA+T Y I ++ P+
Sbjct: 244 LTYRVISKDGIMHDPVPITISEPIM-------MHDFAITETYAIFMDLPMHFRPKEMVKE 296
Query: 284 -----------------VPRLIKNSVTNR--PLATCLKFFEKQSNIHSTPRYAQMFRARP 324
+PR K+ + R L C F +N + R
Sbjct: 297 KKMIYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIF--HNANAWEEEDEVVLITCRL 354
Query: 325 LRFRLDLASPRTAP-----------------TGKVRPSVICDVGCETPRMNGQHQGRPYT 367
LD+ S + TG + + PR+N + G+
Sbjct: 355 ENPDLDMVSGKVKEKLENFGNELYEMRFNMKTGSASQKKLSASAVDFPRINECYTGKKQR 414
Query: 368 YFYAISADIDRDNPGTL-IKVNVQNNTCKSWSQ------------KDVYPSEPVFVATPN 414
Y Y D G + ++ + T K + + Y SE ++V
Sbjct: 415 YVYGTILDSIAKVTGIIKFDLHAEAETGKRMLEVGGNIKGIYDLGEGRYGSEAIYVPRET 474
Query: 415 AVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFPHER 473
A +ED+G L+ + + + + V++A+TM P VP H + E+
Sbjct: 475 A-EEDDGYLI-FFVHDENTGKSCVTVIDAKTMSAEPVAVVELPHRVPYGFHALFVTEEQ 531
>sp|Q9C6Z1|NCED5_ARATH Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1
Length = 589
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 61 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 120
+V+G IP IDGV +RNG S HLFD G++H KI++G +Y C+F ++E
Sbjct: 130 SVDGKIPDCIDGVYLRNGANPL-FEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETER 188
Query: 121 YIK 123
++
Sbjct: 189 LVQ 191
>sp|Q84KG5|CCD_CROSA Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus
GN=CCD PE=1 SV=1
Length = 546
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 97/484 (20%), Positives = 168/484 (34%), Gaps = 88/484 (18%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKS--- 118
V G +P ++G +R GP + + H FD G++H +I G TY +++K+
Sbjct: 71 VRGHLPECLNGEFVRVGPNPKFMPVAGY-HWFDGDGMIHGMRIKDGKATYASRYVKTSRL 129
Query: 119 --ESYIKNHAARRIV-VTGFGTRFVPDP--CASIFQRIATLFKPGSDNTLVSVYPIQDQV 173
E Y + +I + GF F+ + + I + G+ NT + + +
Sbjct: 130 KQEEYFEGPKFMKIGDLKGFFGLFMVQMQLLRAKLKVIDVSYGVGTGNTALIYHHGKLLA 189
Query: 174 YALGDSNYMHRI-DPATLDTLEKMDLARDVTILHQ-TSHP-LTTSDGETFNLGVTLRPTG 230
+ D Y+ ++ + L TL +D D + H T+HP + E F G P
Sbjct: 190 LSEADKPYVVKVLEDGDLQTLGLLDY--DKRLSHSFTAHPKVDPFTDEMFTFGYAHTPPY 247
Query: 231 PRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLIKN 290
Y ++ + V V + V MH FA+T +Y I ++ PL ++K
Sbjct: 248 VTYRVISKDGVMRDPVPITIPASVM-------MHDFAITENYSIFMDLPLYFQPKEMVKG 300
Query: 291 SVTNRPLATCLKFFEKQSNIHSTPRYAQ-------------------------------- 318
K++ PRYA+
Sbjct: 301 GKLIFSFDAT-----KKARFGVLPRYAKDDSLIRWFELPNCFIFHNANAWEEGDEVVLIT 355
Query: 319 -------------MFRARPLRFRLDLASPR-TAPTGKVRPSVICDVGCETPRMNGQHQGR 364
+ + F+ +L R TG + + PR+N + R
Sbjct: 356 CRLENPDLDMVNGAVKEKLENFKNELYEMRFNMKTGAASQKQLSVSAVDFPRINESYTTR 415
Query: 365 PYTYFYA------------ISADIDRDNPGTLIKVNVQNNTCKSWS-QKDVYPSEPVFVA 411
Y Y I D+ + K+ V N + Y SE VFV
Sbjct: 416 KQRYVYGTILDNITKVKGIIKFDLHAEPEAGKKKLEVGGNVQGIFDLGPGRYGSEAVFVP 475
Query: 412 TPNAVK--EDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYF 469
+K ED+G L+ + + + + V++A+TM P VP H ++
Sbjct: 476 RERGIKSEEDDGYLI-FFVHDENTGKSEVNVIDAKTMSAEPVAVVELPNRVPYGFHAFFV 534
Query: 470 PHER 473
E+
Sbjct: 535 NEEQ 538
>sp|Q9LRM7|NCED6_ARATH 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1
Length = 577
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 42/259 (16%)
Query: 57 PVQGTVE--GVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKIS-SGLVTYQC 113
PVQ +E G IPS + GV IRNG + HLFD G++H I V+Y C
Sbjct: 112 PVQNGLEVVGQIPSCLKGVYIRNGANPM-FPPLAGHHLFDGDGMIHAVSIGFDNQVSYSC 170
Query: 114 KFIKSESYIKNHAARRIVVTGFGTRFVPDPCASI-----FQRIATLFKPGSDNTLV---- 164
++ K+ ++ T G P P + R+A LF + LV
Sbjct: 171 RYTKTNRLVQE--------TALGRSVFPKPIGELHGHSGLARLA-LFTARAGIGLVDGTR 221
Query: 165 -------SVYPIQDQVYALGDSN--YMHRID-PATLDTLEK--MDLARDVTILHQTSHPL 212
V ++ A+ + + Y +ID L+T+ + D D +++
Sbjct: 222 GMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDA 281
Query: 213 TTSDGETFNLGVTLRPTGPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHY 272
TT D T + V +P RY L+ N + ++P P +H FA+T ++
Sbjct: 282 TTGDLHTLSYNVLKKPH-LRY--LKFNTCGKKTRDVEITLP-----EPTMIHDFAITENF 333
Query: 273 FIIVEQPLSISVPRLIKNS 291
+I +Q + + +I+
Sbjct: 334 VVIPDQQMVFKLSEMIRGG 352
>sp|O06785|CCO_MYCTU Carotenoid cleavage oxygenase OS=Mycobacterium tuberculosis
GN=Rv0654 PE=1 SV=1
Length = 501
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 27/174 (15%)
Query: 315 RYAQMFR---------ARPL--RFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQG 363
RY++MF +RP R+ ++LA TG V D E PR+N G
Sbjct: 335 RYSRMFDRDRRGPGGDSRPSLDRWTINLA------TGAVTAECRDDRAQEFPRINETLVG 388
Query: 364 RPYTYFYAISADID-RDNPGTLIKVNVQNNTCKSWSQK------DVYPSEPVFVATPNAV 416
P+ + Y + + G + + C + S D+ E VFV P+A
Sbjct: 389 GPHRFAYTVGIEGGFLVGAGAALSTPLYKQDCVTGSSTVASLDPDLLIGEMVFVPNPSAR 448
Query: 417 KEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 470
ED+G+L+ W LL+L+A+T++ + V+ P VP HG + P
Sbjct: 449 AEDDGILMG-YGWHRGRDEGQLLLLDAQTLESIATVHL--PQRVPMGFHGNWAP 499
>sp|Q9M9F5|NCED9_ARATH 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1
Length = 657
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 121
V G +P I GV +RNG + S HLFD G++H + +G V+Y C+F ++
Sbjct: 201 VTGTVPECIQGVYVRNGANPLH-KPVSGHHLFDGDGMVHAVRFDNGSVSYACRFTETNRL 259
Query: 122 IKNHAARRIV 131
++ R V
Sbjct: 260 VQERECGRPV 269
>sp|Q9M6E8|NCED1_PHAVU 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus
vulgaris GN=NCED1 PE=2 SV=1
Length = 615
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 95/240 (39%), Gaps = 23/240 (9%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 121
V G IP IDGV +RNG + H FD G++H K ++G +Y C+F +++
Sbjct: 160 VVGKIPKCIDGVYVRNGANPL-YEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRL 218
Query: 122 IKNHA-ARRIVVTGFG--------TRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQ 172
+ + R + G R + S+FQ + G N + +
Sbjct: 219 AQEKSLGRPVFPKAIGELHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNNHLL 278
Query: 173 VYALGDSNYMHRIDP-ATLDTLEKMDLARDVT---ILHQTSHPLTTSDGETFNLGVTLRP 228
+ D Y RI L T+ + D + I H P+ D + V +P
Sbjct: 279 AMSEDDLPYHVRITSNGDLTTVGRYDFNGQLNSTMIAHPKLDPV-NGDLHALSYDVVQKP 337
Query: 229 TGPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLI 288
+Y + V V+ +P++ P MH FA+T ++ ++ +Q + + +I
Sbjct: 338 Y-LKYFRFSADGVKSPDVE----IPLK---EPTMMHDFAITENFVVVPDQQVVFKLTEMI 389
>sp|O24592|NCED1_MAIZE 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays
GN=VP14 PE=1 SV=2
Length = 604
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFD-----HLFDCSGLLHRFKISSGLV-TYQCKF 115
V G IP +IDGV RNG FD HLFD G++H +I +G +Y C+F
Sbjct: 141 VSGRIPPFIDGVYARNG------ANPCFDPVAGHHLFDGDGMVHALRIRNGAAESYACRF 194
Query: 116 IKSESYIKNHAARRIV 131
++ + A R V
Sbjct: 195 TETARLRQERAIGRPV 210
>sp|Q9LRR7|NCED3_ARATH 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1
Length = 599
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 107/282 (37%), Gaps = 40/282 (14%)
Query: 55 DQPVQGT--VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
+QPV+ V G +P I GV +RNG + + H FD G++H K G +Y
Sbjct: 132 EQPVRRNLPVVGKLPDSIKGVYVRNGANPLH-EPVTGHHFFDGDGMVHAVKFEHGSASYA 190
Query: 113 CKFIKSESYIKN-HAARRIVVTGFGTRFVPDPCASIF----QRIATLFKP--GSDNTLVS 165
C+F ++ +++ R + G A + + A + P G+
Sbjct: 191 CRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAG 250
Query: 166 VYPIQDQVYALGDSN--YMHRIDP-ATLDTLEKMDL---ARDVTILHQTSHPLTTSDGET 219
+ ++ A+ + + Y +I P L T+ + D I H P GE
Sbjct: 251 LVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLESTMIAHPKVDP---ESGEL 307
Query: 220 FNLG--VTLRPTGPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVE 277
F L V +P +Y + V++ P MH FA+T ++ ++ +
Sbjct: 308 FALSYDVVSKPY-LKYFRFSPDGTKSPDVEIQLD-------QPTMMHDFAITENFVVVPD 359
Query: 278 QPLSISVPRLI---------KNSVTNRPLATCLKFFEKQSNI 310
Q + +P +I KN V K+ E SNI
Sbjct: 360 QQVVFKLPEMIRGGSPVVYDKNKVAR--FGILDKYAEDSSNI 399
>sp|Q52008|LSDX3_PSEPA Lignostilbene-alpha,beta-dioxygenase isozyme III OS=Pseudomonas
paucimobilis GN=lsdB PE=1 SV=1
Length = 490
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 101/477 (21%), Positives = 179/477 (37%), Gaps = 98/477 (20%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 121
VEG IP+ +DG R P + D F+ G++ F+ G + ++ ++ +++ +
Sbjct: 28 VEGEIPAQLDGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHDGKIDFRQRYAQTDKW 87
Query: 122 IKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGDSNY 181
A + + + D R G+ NT V V+ ++YA+ + +
Sbjct: 88 KVERKAGKSLFGAYRNPLTDDASVQGMIR-------GTANTNVMVH--AGKLYAMKEDSP 138
Query: 182 MHRIDPATLDTLEKMD----LARDVTILHQTSHPLTTSDGETFNLGVT------------ 225
+DP TL+T + L H P+T G N G
Sbjct: 139 CLIMDPLTLETEGYTNFDGKLKNQTFSAHAKIDPVT---GNFCNFGYAATGLLTTDCSYF 195
Query: 226 -LRPTG----------PRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFI 274
+ P G P YC++ + +H + VP P + A PH+
Sbjct: 196 EIDPAGNLLFETEFQVPYYCMMHDYGLTEHYA-IFHIVPCS----PNWDRLKAGLPHFGF 250
Query: 275 IVEQPLSIS-VPRLIKNSVTNRPL-----------ATCLKFFEKQSNIH-STPRYAQM-- 319
P+ + VPR VTN+ + + + FE+ S IH TP+
Sbjct: 251 DTTLPVWLGVVPR--GPGVTNKDVRWFKAPKTIFASHVMNAFEEGSKIHFDTPQAENNAF 308
Query: 320 -------------FRARPL--RFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGR 364
ARP R+ +DL S + +VR + E PR++ ++ G+
Sbjct: 309 PFFPDIHGAPFDPVAARPYLHRWTVDLGS-NSEDFAEVRQ--LTSWIDEFPRVDARYVGQ 365
Query: 365 PYTYFYAISADIDRD-----NPGTLIKVN----VQNNTCKS---WSQKDVYPSEPVFVAT 412
PY + + + D + + + K+N + T K W EP FV
Sbjct: 366 PYRHGWGLVMDPEMEMEFARGRASGFKMNRIGHWDHATGKEDSWWCGPQSIIQEPCFVPR 425
Query: 413 PNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQE--LGRVNFTTPTPVPKCLHG 466
E +G +++++ + T S L+VL+A +++ +GR P + LHG
Sbjct: 426 MADSAEGDGYIIALV--DNLITNYSDLVVLDALNLKDGPIGRAKL--PIRLRSGLHG 478
>sp|B1VAI9|PYRG_PHYAS CTP synthase OS=Phytoplasma australiense GN=pyrG PE=3 SV=1
Length = 547
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 196 MDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCILQLNDVADHRVKLVTSVPVR 255
+D A I +T HP+ T + NLG TLR G C LQ N ++ ++ +
Sbjct: 405 LDGANSTEIDEKTPHPVITKKIKNSNLGGTLR-LGSYRCCLQKNSKSE-------AIYQQ 456
Query: 256 WKFHPGYMHTFAMTPHYFIIVEQ 278
+ + H F M P Y + E+
Sbjct: 457 TTIYERHRHRFEMNPSYVSLFEK 479
>sp|O74683|KRE9_CANGA Cell wall synthesis protein KRE9 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=KRE9 PE=3 SV=1
Length = 276
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 18/138 (13%)
Query: 354 TPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYP---SEPVFV 410
TPR+ + G P T+ D + P T I+ NT +S+ VY +E
Sbjct: 126 TPRIELTNMGGPTTFELLTYTDTIQPVPQTSIRTGTDTNT-QSFDASSVYSLPYTEQTLK 184
Query: 411 ATPNAVKEDEGVLLSVLLWSH-HPT---------RVSLLVLNART----MQELGRVNFTT 456
+++ G ++ WS +PT R SL L+ T VN+ T
Sbjct: 185 TRVAPIQQQPGTKVTATTWSRRYPTSAVTFYSTFRSSLDQLSTLTPAWNYTVSSAVNYAT 244
Query: 457 PTPVPKCLHGWYFPHERK 474
P +P GWY P +R+
Sbjct: 245 PAAMPSDNGGWYNPIKRQ 262
>sp|Q3ILA5|UBIG_PSEHT 3-demethylubiquinone-9 3-methyltransferase OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=ubiG PE=3 SV=1
Length = 236
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 103 KISSGLVTYQCKFIK--SESYIKNHAARRIVVTGFGT-RFVPDPCASIFQRIATLFKPGS 159
K+ S ++IK +E Y H AR VVT VPDP ASI +A L KPG+
Sbjct: 90 KLHSLETGVNVEYIKVPAEQYASEHPARFDVVTCMEMLEHVPDP-ASIIHAVAELAKPGA 148
Query: 160 D 160
D
Sbjct: 149 D 149
>sp|Q2NK04|PYRG_AYWBP CTP synthase OS=Aster yellows witches'-broom phytoplasma (strain
AYWB) GN=pyrG PE=3 SV=2
Length = 536
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 20/99 (20%)
Query: 180 NYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCILQLN 239
N +H D +L+ EK T HP+ T NLG TLR G C L+
Sbjct: 401 NVLHLQDANSLEVDEK------------TPHPVITKKIVDINLGGTLR-LGSYSCHLK-- 445
Query: 240 DVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQ 278
A+ + K + + + ++ H H F M PHY + E+
Sbjct: 446 --ANTKSKAIYNQEIIYERH---RHRFEMNPHYVSLFEK 479
>sp|Q5LNK3|ACPS_RUEPO Holo-[acyl-carrier-protein] synthase OS=Ruegeria pomeroyi (strain
ATCC 700808 / DSM 15171 / DSS-3) GN=acpS PE=3 SV=1
Length = 148
Score = 33.1 bits (74), Expect = 4.6, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 21/125 (16%)
Query: 356 RMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCK-----------SWSQ---KD 401
R + + R +T A+ D GT K C SW +
Sbjct: 21 RFGDRFRNRVFTEIEQRKAERRSDTAGTYAKRWAAKEACSKALGTGLRMGISWKDMAVSN 80
Query: 402 VYPSEPVFVATPNAVK-------EDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNF 454
+ +PV T A + E ++ V L HP + +V+ AR + E+G VN
Sbjct: 81 LRSGQPVMQVTGWAAERLREMTPEGYEAIIHVTLTDDHPWAQAFVVIEARPLAEVGEVNL 140
Query: 455 TTPTP 459
T P P
Sbjct: 141 TYPAP 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,393,284
Number of Sequences: 539616
Number of extensions: 8312878
Number of successful extensions: 15699
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 15558
Number of HSP's gapped (non-prelim): 73
length of query: 476
length of database: 191,569,459
effective HSP length: 121
effective length of query: 355
effective length of database: 126,275,923
effective search space: 44827952665
effective search space used: 44827952665
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)