Query psy5322
Match_columns 476
No_of_seqs 151 out of 1056
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 23:41:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5322.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5322hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kvc_A Retinoid isomerohydrola 100.0 4E-108 2E-112 882.6 38.2 423 44-471 13-533 (533)
2 3npe_A 9-CIS-epoxycarotenoid d 100.0 2E-102 9E-107 835.3 38.1 419 32-473 33-523 (529)
3 2biw_A Apocarotenoid-cleaving 100.0 5E-101 2E-105 820.3 38.5 398 46-471 23-490 (490)
4 3mbr_X Glutamine cyclotransfer 35.9 85 0.0029 29.5 7.4 17 381-397 42-58 (243)
5 2mad_H Methylamine dehydrogena 32.9 1.9E+02 0.0064 28.2 9.8 79 367-454 33-115 (373)
6 3nol_A Glutamine cyclotransfer 31.1 40 0.0014 32.2 4.2 36 165-200 91-127 (262)
7 3c75_H MADH, methylamine dehyd 28.3 1.4E+02 0.0047 30.4 8.0 79 367-454 85-167 (426)
8 3mbr_X Glutamine cyclotransfer 28.2 46 0.0016 31.4 4.1 36 165-200 69-105 (243)
9 2mad_H Methylamine dehydrogena 27.9 4.2E+02 0.014 25.6 11.8 82 165-254 72-166 (373)
10 3nok_A Glutaminyl cyclase; bet 26.4 45 0.0015 32.0 3.6 37 165-201 100-137 (268)
11 1qks_A Cytochrome CD1 nitrite 24.4 5.2E+02 0.018 26.9 11.9 105 325-454 178-284 (567)
12 2iwa_A Glutamine cyclotransfer 21.0 2.7E+02 0.0094 26.1 8.1 70 368-454 33-104 (266)
13 3nol_A Glutamine cyclotransfer 20.2 81 0.0028 30.0 4.1 38 166-203 177-215 (262)
No 1
>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A 4f2z_A 4f30_A 4f3a_A 4f3d_A
Probab=100.00 E-value=4.5e-108 Score=882.56 Aligned_cols=423 Identities=33% Similarity=0.652 Sum_probs=346.0
Q ss_pred ccccccCCccccCCccceEEeeCCCCCceEEEeecCCCCCCCCcccccccCCCCceEEEEEecCcEEEEEEEecCHHHHH
Q psy5322 44 GVWFRDCHTEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESYIK 123 (476)
Q Consensus 44 ~~~~~~~~~e~~~~~~~~V~G~IP~~L~Gtl~RnGP~~~~~g~~~~~H~FDGdGmlh~~~f~~G~v~y~~RfV~T~~~~~ 123 (476)
+..|+ +..|.++|++++|+|+||+||+|||||||||++++|+.+++||||||||||+|+|++|+|+|+||||||++|++
T Consensus 13 ~~~f~-~~~E~~~p~~l~V~G~IP~~L~Gtl~RNGPg~~~~g~~~~~HwFDGdGmlh~~~~~~G~v~y~~R~v~T~~~~~ 91 (533)
T 3kvc_A 13 KKLFE-TVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTDAYVR 91 (533)
T ss_dssp GGGGS-CCCCCSSCEECEEEECCCTTCCEEEEEEEECCCEETTEECCBTTTSCEEEEEEEEETTEEEEEEEECCCHHHHH
T ss_pred hhhcC-cccccCCceeeeEEeeCCCCCceEEEEeCCCccccCCcccccccCCCCEEEEEEEeCCEEEEEEEEecCHHHHH
Confidence 33456 55777888889999999999999999999999998888899999999999999999999999999999999999
Q ss_pred HHHcCCceeeccCcccCCCCcchHHHHHHhhcCC--CCCCceeeeeeeCCEEEEeecCCceeEEcCCCCcccccccCCCc
Q psy5322 124 NHAARRIVVTGFGTRFVPDPCASIFQRIATLFKP--GSDNTLVSVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARD 201 (476)
Q Consensus 124 e~~agr~l~~~fg~~~~~~p~~~~~~r~~~~~~~--~~~~aNt~v~~~gg~LlAl~E~~~p~~iDp~TLeT~G~~d~~g~ 201 (476)
|+++||++|++||+.+.++||+++|+++++.+.. .+++|||||++|+|+||||||++.||+|||+||||+|++||+|+
T Consensus 92 e~~agr~~~~~fg~~~~~~p~~~~~~~~~~~~~~~~~~~~ANt~v~~~~g~LlAl~E~~~p~~iDp~tLeT~G~~d~~g~ 171 (533)
T 3kvc_A 92 AMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVGEDYYACTETNFITKVNPETLETIKQVDLCNY 171 (533)
T ss_dssp HHHHTSCCSCBTTBCC-------------------CCCCCCCSEEEEETTEEEEECSSSEEEEECTTTCCEEEEEEHHHH
T ss_pred HHHcCCcceeccCcccCCcchhhHHHHHHHhhccCCCCCCCEEEEEEECCEEEEEEcCCcCEEeChHHcccccccccCCc
Confidence 9999999999999999999999999998777654 68999999999999999999999999999999999999999999
Q ss_pred cCCCCcCccceecCCCCEEEEEeeeCCC-CCeEEEEEEC-C-----CcccceEEEEeeeccCCCCCceeeeeeecCCEEE
Q psy5322 202 VTILHQTSHPLTTSDGETFNLGVTLRPT-GPRYCILQLN-D-----VADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFI 274 (476)
Q Consensus 202 l~~~~~tAHPk~Dp~Ge~~~~g~~~~~~-~~~~~v~~~~-~-----g~~~~~~~v~~~~~~~~~~p~~iHDfaiTeny~V 274 (476)
|+...||||||+|||||+||||+++++. .+.|.+|+++ . +.+.+.++++++++++++.|+|||||||||||+|
T Consensus 172 l~~~~~tAHPk~DptGel~~fg~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~p~~iHDFaiTeny~V 251 (533)
T 3kvc_A 172 VSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIV 251 (533)
T ss_dssp SSCSCCCSCCEECTTSCEEEEEEECC---CCEEEEEEECCCCTTCCCGGGGCEEEEEEECSSTTCCBCCCCCEECSSEEE
T ss_pred cCCCccCCCCccCCCCCEEEEeeccCCCCCcEEEEEEECccccccccccccceeEEeeccccCCCCceeeeeeecCCEEE
Confidence 9877899999999999999999998864 5789999994 2 2355677889999888889999999999999999
Q ss_pred EEecCceechhhhhcc-cCCCCCCCcceEEeccC-----------------------------CCCCC------------
Q psy5322 275 IVEQPLSISVPRLIKN-SVTNRPLATCLKFFEKQ-----------------------------SNIHS------------ 312 (476)
Q Consensus 275 ~~~~P~~~~~~~~~~g-~~~~~~~~~~~~W~~~~-----------------------------~n~~~------------ 312 (476)
|+++|+++|+.+|++| +++..++.++++|+++. .|+.+
T Consensus 252 f~~~P~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~tr~~VipR~~~~~~~~~~~~~~~f~fH~~NA~Ee~~~Iv~d~~~~ 331 (533)
T 3kvc_A 252 FVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYINNKYRTSPFNLFHHINTYEDHEFLIVDLCCW 331 (533)
T ss_dssp EEECSEEEC-----------CCCSGGGEEECSSCCEEEEEEETTTTEEEEEEEEECCEEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEeCCeEEcHHHHhhcccccCCChHHheeecCCCCcEEEEEECCCCCcccEEEEeCCeeEEeeeeeEEeCCEEEEEEeee
Confidence 9999999999999987 66677888899999877 12211
Q ss_pred -C-c-ccc-------------------ccCCCcceEEEEeCCCCCC-----------CC-C------C--ceeeeEecc-
Q psy5322 313 -T-P-RYA-------------------QMFRARPLRFRLDLASPRT-----------AP-T------G--KVRPSVICD- 349 (476)
Q Consensus 313 -~-~-~~~-------------------~~~~~~l~R~~idl~tg~~-----------~~-~------~--~~~~~~l~~- 349 (476)
+ . .+. ...+++|+||+|||+++.. ++ + + +++++.|++
T Consensus 332 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~R~~l~l~~~~~~~~~nl~~~~~~~~~a~~~~~~~~~~~~~~l~~~ 411 (533)
T 3kvc_A 332 KGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATAILCSDETIWLEPEVLFSG 411 (533)
T ss_dssp ESSSCGGGGCBHHHHTSCHHHHHHHHTTSCEEEEEEEEEESCCCGGGTTSBCCCCTTCCCEEEECTTSEEEEECEEEECB
T ss_pred CCchhhhhhhhhhhhcccchhccccccccCCceEEEEEEeCCcccccccccccccccccceeeeccCCceeeeeeeeccC
Confidence 1 0 000 1244679999999987510 00 0 0 156788875
Q ss_pred -C-CccCccccC-CCCCCCCcEEEEeecCCCCCCCCeEEEEeccCCceEEEcCCCCCCCccEEeeCCCCCCCCCcEEEEE
Q psy5322 350 -V-GCETPRMNG-QHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSV 426 (476)
Q Consensus 350 -~-~~EfP~In~-~~~Gr~yRy~Y~~~~~~~~~~~~~l~K~Dl~tg~~~~w~~~~~~~~EPvFVPrp~~~~EDDG~ll~~ 426 (476)
. +||||+||+ +|.||+|||+|+++.+ ...+++|+|+|++||+.+.|+++++|+|||||||||++++|||||||++
T Consensus 412 ~~~~~EfP~In~~~~~Gr~~Ry~Y~~~~~--~~~~~~l~K~D~~tg~~~~w~~~~~~~~EPiFVPrp~~~~EDDG~lLs~ 489 (533)
T 3kvc_A 412 PRQAFEFPQINYQKYGGKPYTYAYGLGLN--HFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSV 489 (533)
T ss_dssp TTEEEEEEECCHHHHTTSCCCEEEEEEEE--TTEEEEEEEEETTTCCEEEECCTTCBCCCCEEEECTTCCSTTCEEEEEE
T ss_pred CcccccCceECHHHhCCCcccEEEEeccC--CCCCceeEEEEcCCCCEEEEeCCCccccCceeecCCCCCCCCCcEEEEE
Confidence 6 899999998 7999999999998765 3457899999999999999999999999999999999999999999999
Q ss_pred EEeCCC-CCceEEEEEeCCCCCcceEEEEeCCCCCCCCCceeeecC
Q psy5322 427 LLWSHH-PTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFPH 471 (476)
Q Consensus 427 v~d~~~-~~~s~LlILDA~~l~~vAr~~l~~P~~vP~gfHG~f~~~ 471 (476)
|+|..+ +++|+|+||||++|++||||+| |++||+||||+|++.
T Consensus 490 V~d~~~~~~~s~LlILDA~~l~~vArv~l--P~rvP~GfHG~w~~~ 533 (533)
T 3kvc_A 490 VVSPGAGQKPAYLLILNAKDLSEVARAEV--EINIPVTFHGLFKKS 533 (533)
T ss_dssp EECCSTTSCSEEEEEEETTTCCEEEEEEE--SSCCCCCCEEEEEEC
T ss_pred EEeCCcCCCccEEEEEeCCCChhhEEEEe--CCCCCCCccccccCC
Confidence 999985 4678999999999999999999 999999999999974
No 2
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=100.00 E-value=2.5e-102 Score=835.31 Aligned_cols=419 Identities=21% Similarity=0.331 Sum_probs=350.4
Q ss_pred hcCCCCCCCcccccccccCCccccC---CccceEEeeCCCCCceEEEeecCCCCCCCCcccccccCCCCceEEEEEecCc
Q psy5322 32 ENGDSIFDNVDAGVWFRDCHTEVDQ---PVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 108 (476)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~e~~~---~~~~~V~G~IP~~L~Gtl~RnGP~~~~~g~~~~~H~FDGdGmlh~~~f~~G~ 108 (476)
|++++|+++.||.++++++++++.+ +..++|+|+||+||+||||||||||.+. ...++||||||||||+|+|++|+
T Consensus 33 ~~~~~~~~~~~~~~~l~g~fapv~ee~~~~~l~V~G~IP~~L~Gt~~RNGpnP~f~-~~~~~HwFDGdGmlh~~~f~~G~ 111 (529)
T 3npe_A 33 ERPHGLPSTADPAVQIAGNFAPVGERPPVHELPVSGRIPPFIDGVYARNGANPCFD-PVAGHHLFDGDGMVHALRIRNGA 111 (529)
T ss_dssp CTTSCCCTTTCHHHHTSGGGSCCCCEEEEESCCEEECCCTTCEEEEEECCBCCSSC-CSSCCCGGGSCBEEEEEEEETTE
T ss_pred cccCCCCCCCCccchhccCcccccccCCcccceEeecCCccCCceEEEecCCcCcC-CcCCCccCCCCceEEEEEECCCc
Confidence 5688999999999999999888765 3468999999999999999999998543 35678999999999999999999
Q ss_pred E-EEEEEEecCHHHHHHHHcCCceeec-cCcccCCCCcchHHHHHH--------hhcCC--CCCCceeeeeeeCCEEEEe
Q psy5322 109 V-TYQCKFIKSESYIKNHAARRIVVTG-FGTRFVPDPCASIFQRIA--------TLFKP--GSDNTLVSVYPIQDQVYAL 176 (476)
Q Consensus 109 v-~y~~RfV~T~~~~~e~~agr~l~~~-fg~~~~~~p~~~~~~r~~--------~~~~~--~~~~aNt~v~~~gg~LlAl 176 (476)
| +|+||||||++|++|+++||++|++ +|+.... +.+.|+. ++++. .+++|||||++|+|+||||
T Consensus 112 a~~y~nRfVrT~~~~~e~~agr~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~~~~~~~~~~~ANtnvv~~~g~llAl 187 (529)
T 3npe_A 112 AESYACRFTETARLRQERAIGRPVFPKAIGELHGH----SGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAM 187 (529)
T ss_dssp EEEEEEEECCCHHHHHHHHHTSCCSCCTTTTTTSS----THHHHHHHHHHHHHTTSCCGGGCCCCCCSCEEEETTEEEEC
T ss_pred cceEEEeEecCHHHHHHHHcCCccccccccccccc----chhhhhhhhhhhcccccccccccCCCCeEEEEEECCEEEEE
Confidence 9 9999999999999999999999987 7765432 2233321 12222 4689999999999999999
Q ss_pred ecCCceeEE--cCC-CCcccccccCCCccCCCCcCccceecC-CCCEEEEEeeeCCCCCeEEEEEE-CCCcccceEEEEe
Q psy5322 177 GDSNYMHRI--DPA-TLDTLEKMDLARDVTILHQTSHPLTTS-DGETFNLGVTLRPTGPRYCILQL-NDVADHRVKLVTS 251 (476)
Q Consensus 177 ~E~~~p~~i--Dp~-TLeT~G~~d~~g~l~~~~~tAHPk~Dp-~Ge~~~~g~~~~~~~~~~~v~~~-~~g~~~~~~~v~~ 251 (476)
||++.||++ ||+ ||||+|++||+|+|.. .||||||+|| |||+++|+|++.. .|++.++++ ++|+. ....+
T Consensus 188 ~E~g~Py~~~idp~~tLeT~G~~d~~g~l~~-~~tAHPk~Dp~TGel~~f~y~~~~-~p~~~~~~~~~~G~~---~~~~~ 262 (529)
T 3npe_A 188 SEDDLPYHVRVADDGDLETVGRYDFDGQLGC-AMIAHPKLDPATGELHALSYDVIK-RPYLKYFYFRPDGTK---SDDVE 262 (529)
T ss_dssp CTTSCCEEEEECTTSCEEEEEECCGGGCCCS-CCCSCCEECTTTCCEEEEECCSSS-SCCCEEEEECTTCCB---CCCEE
T ss_pred EcCCCceEEecCCCCCcceeeeeccCCccCC-cccccCcCCCCCCcEEEEEeecCC-CCcEEEEEECCCCCE---EEEEE
Confidence 999999987 995 9999999999999984 7999999999 9999999999764 478999999 66632 12344
Q ss_pred eeccCCCCCceeeeeeecCCEEEEEecCceechhhhhcccC----------------CCCCCCcceEEeccC-------C
Q psy5322 252 VPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLIKNSV----------------TNRPLATCLKFFEKQ-------S 308 (476)
Q Consensus 252 ~~~~~~~~p~~iHDfaiTeny~V~~~~P~~~~~~~~~~g~~----------------~~~~~~~~~~W~~~~-------~ 308 (476)
++ ++.|+|||||||||||+||+++|+++|+.+|++|.. +.....+.++|++.+ .
T Consensus 263 i~---~~~p~~~HDFaiTenyvVf~~~Pl~~~~~~~~~g~~~~~~~p~~~tr~~VipR~~~~~~~vrw~e~~~~f~fH~~ 339 (529)
T 3npe_A 263 IP---LEQPTMIHDFAITENLVVVPDHQVVFKLQEMLRGGSPVVLDAAKTSRFGVLPKHAADASEMAWVDVPDCFCFHLW 339 (529)
T ss_dssp CC---CSSCBCCCCCEECSSEEEEEECSEEECGGGGTTTCCSEEECTTSCCEEEEEETTCSSGGGCEEEECTTCEEEEEE
T ss_pred Ee---CCCCceEeeEEecCCeEEEEeCCeEEcHHHHhCCCCceEECCCCCcEEEEEECCCCCCCceEEEEcCCEEEEEec
Confidence 54 468999999999999999999999999999988742 111223467888776 2
Q ss_pred CCCCCc-----------------cc---cccCCCcceEEEEeCCCCCCCCCCceeeeEec----cCCccCccccCCCCCC
Q psy5322 309 NIHSTP-----------------RY---AQMFRARPLRFRLDLASPRTAPTGKVRPSVIC----DVGCETPRMNGQHQGR 364 (476)
Q Consensus 309 n~~~~~-----------------~~---~~~~~~~l~R~~idl~tg~~~~~~~~~~~~l~----~~~~EfP~In~~~~Gr 364 (476)
|+.++. .+ ...++++|+||+||+.++ .++.+.|. +.+||||+||++|.||
T Consensus 340 NA~Ee~~~~~ivv~~~~~~~~~~~~~~~~~~~~~~l~r~rl~l~~g------~~~~~~l~~~~~~~~~EfP~In~~~~Gr 413 (529)
T 3npe_A 340 NAWEDEATGEVVVIGSCMTPADSIFNESDERLESVLTEIRLDARTG------RSTRRAVLPPSQQVNLEVGMVNRNLLGR 413 (529)
T ss_dssp EEEEETTTTEEEEEEEEECCCCCSCCSSSSCCCCEEEEEEECTTTC------CEEEEESSCSSSCCCEEEEEECGGGTTS
T ss_pred ccEecCCCCeEEEEEecccCchhhhhccchhhccceEEEEEcCCCC------CEEeEEecccccCccccCceEChhHcCC
Confidence 332210 01 123467899999999988 25666666 4899999999999999
Q ss_pred CCcEEEEeecCCCCCCCCeEEEEeccCCceEEE-cCCCCCCCccEEeeCCC----CCCCCCcEEEEEEEeCCCCCceEEE
Q psy5322 365 PYTYFYAISADIDRDNPGTLIKVNVQNNTCKSW-SQKDVYPSEPVFVATPN----AVKEDEGVLLSVLLWSHHPTRVSLL 439 (476)
Q Consensus 365 ~yRy~Y~~~~~~~~~~~~~l~K~Dl~tg~~~~w-~~~~~~~~EPvFVPrp~----~~~EDDG~ll~~v~d~~~~~~s~Ll 439 (476)
+|||+|+++.++. ..+++|+|+|++||+.+.| .++++|+|||||||||+ +++|||||||++|+|..+ ++|+|+
T Consensus 414 ~~Ry~Y~~~~~~~-~~~~~l~K~D~~tg~~~~~~~g~~~~~~EPvFVPrp~~~~~~~~EDDG~lLs~V~d~~~-~~S~Ll 491 (529)
T 3npe_A 414 ETRYAYLAVAEPW-PKVSGFAKVDLSTGELTKFEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERA-GTSELL 491 (529)
T ss_dssp CCSEEEEEECCST-TSCCEEEEEETTTCCEEEEECCTTBCCCCCEEEECCSCSSSSCCTTCEEEEEEEEBSSC-CCEEEE
T ss_pred ccceEEEeccCCC-CCcceEEEEecCCCceEEEEcCCCccccCCEeeeCCCCCCCCCCCCCcEEEEEEEECCC-CcEEEE
Confidence 9999999887654 4579999999999998776 58999999999999999 889999999999999985 689999
Q ss_pred EEeCCCCCcceEEEEeCCCCCCCCCceeeecCCC
Q psy5322 440 VLNARTMQELGRVNFTTPTPVPKCLHGWYFPHER 473 (476)
Q Consensus 440 ILDA~~l~~vAr~~l~~P~~vP~gfHG~f~~~~~ 473 (476)
||||++|+++|||+| |++||+||||+|+++++
T Consensus 492 ILDA~~l~~vArv~L--P~rvP~GfHG~wv~~~~ 523 (529)
T 3npe_A 492 VVNAADMRLEATVQL--PSRVPFGFHGTFITGQE 523 (529)
T ss_dssp EEETTTTEEEEEEEE--SSCCCCCSCEEEEEHHH
T ss_pred EEeCCCCccceEEEC--CCCCCCCccccccCHHH
Confidence 999999999999999 99999999999999754
No 3
>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*
Probab=100.00 E-value=4.8e-101 Score=820.35 Aligned_cols=398 Identities=25% Similarity=0.413 Sum_probs=339.2
Q ss_pred ccccCCccccCCccce-EEeeCCCCCceEEEeecCCCCCCCCcccccccCCCCceEEEEE-ecCcEEEEEEEecCHHHHH
Q psy5322 46 WFRDCHTEVDQPVQGT-VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKI-SSGLVTYQCKFIKSESYIK 123 (476)
Q Consensus 46 ~~~~~~~e~~~~~~~~-V~G~IP~~L~Gtl~RnGP~~~~~g~~~~~H~FDGdGmlh~~~f-~~G~v~y~~RfV~T~~~~~ 123 (476)
-|+++.+|++. .+. |+|+||+||+|||||||||++++++.+++||||||||||+|+| ++|+|+|+||||||++|++
T Consensus 23 ~f~~~~~E~~~--~l~~V~G~IP~~L~Gt~~RnGP~~~~~~~~~~~H~FDGdGmlh~~~f~~~G~v~y~~R~v~T~~~~~ 100 (490)
T 2biw_A 23 GYQSQPQEWDY--WVEDVEGSIPPDLQGTLYRNGPGLLEIGDRPLKHPFDGDGMVTAFKFPGDGRVHFQSKFVRTQGYVE 100 (490)
T ss_dssp TTSCCCSCEEE--ECCCEEECCCTTCCEEEEECCBCCSEETTEECSSGGGSCBEEEEEEECSSSCCEEEEEECCCHHHHH
T ss_pred hccCccccCCc--ccceEEeCCCCCCCeEEEEeCCCcCcCCCCcccCccCCCCeEEEEEECCCCEEEEEcceEeCHHHHH
Confidence 36678778743 355 9999999999999999999999988899999999999999999 9999999999999999999
Q ss_pred HHHcCCceeec-cCcccCCCCcchHHHHHHhhcCC-CCCCceeeeeeeCCEEEEeecCCceeEEcCCCCcccccccCCCc
Q psy5322 124 NHAARRIVVTG-FGTRFVPDPCASIFQRIATLFKP-GSDNTLVSVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARD 201 (476)
Q Consensus 124 e~~agr~l~~~-fg~~~~~~p~~~~~~r~~~~~~~-~~~~aNt~v~~~gg~LlAl~E~~~p~~iDp~TLeT~G~~d~~g~ 201 (476)
|+++||++|++ ||+...+++|.++ +.. .+++|||||++|+|+||||||++.||+|||.||||+|+++|+|+
T Consensus 101 e~~ag~~~~~~~fg~~~~~~~~~~~-------~~~~~~~~aNT~v~~~~g~llAl~E~~~p~~ldp~tLeT~G~~d~~g~ 173 (490)
T 2biw_A 101 EQKAGKMIYRGVFGSQPAGGWLKTI-------FDLRLKNIANTNITYWGDRLLALWEGGQPHRLEPSNLATIGLDDLGGI 173 (490)
T ss_dssp HHHHTSCCSBCTTSCCCSSTHHHHT-------TCCCBCCCCCSEEEEETTEEEEECTTSCCEEECTTTCCEEEECCTTTT
T ss_pred HHHhCCcccccccccCCCCchhhhh-------cccccCCCCEEEEEEECCEEEEEEcCCCCEecccccccEeeeeccCCc
Confidence 99999999999 9998776665432 222 58999999999999999999999999999999999999999999
Q ss_pred c-CCCCcCccceecCC-------CCEEEEEeeeCCCCCeEEEEEE-CCCcccceEEEEeeeccCCCCCceeeeeeecCCE
Q psy5322 202 V-TILHQTSHPLTTSD-------GETFNLGVTLRPTGPRYCILQL-NDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHY 272 (476)
Q Consensus 202 l-~~~~~tAHPk~Dp~-------Ge~~~~g~~~~~~~~~~~v~~~-~~g~~~~~~~v~~~~~~~~~~p~~iHDfaiTeny 272 (476)
| ++..||||||+||. ||+++|||+.++ .+.+.++++ ++|.+. ....++ ++.|+|||||||||||
T Consensus 174 l~~~~~~tAHPk~Dp~~~~~~gtgel~~fg~~~~~-~~~~~~~~~~~~G~~~---~~~~~~---~~~~~~~HDfaiTeny 246 (490)
T 2biw_A 174 LAEGQPLSAHPRIDPASTFDGGQPCYVTFSIKSSL-SSTLTLLELDPQGKLL---RQKTET---FPGFAFIHDFAITPHY 246 (490)
T ss_dssp SCTTCCCCSCCEEESSCTTTTTCCEEEEEEEEESS-EEEEEEEEECTTSCEE---EEEEEE---EESCCCCCCCEECSSE
T ss_pred ccCCcccccCceECccccccCCCCeEEEEEecCCC-CcEEEEEEECCCCCEE---eeEEEe---CCCCceEeeeeccCCE
Confidence 9 66789999999994 599999999864 356899999 566322 222233 3579999999999999
Q ss_pred EEEEecCceechhhhhcccCCCCCCC--------------------cceEEeccCC-------CCCCC------------
Q psy5322 273 FIIVEQPLSISVPRLIKNSVTNRPLA--------------------TCLKFFEKQS-------NIHST------------ 313 (476)
Q Consensus 273 ~V~~~~P~~~~~~~~~~g~~~~~~~~--------------------~~~~W~~~~~-------n~~~~------------ 313 (476)
+||+++|+++++.+++.|. ++.. +.++|++.++ |+.++
T Consensus 247 ~V~~~~P~~~~~~~~~~g~---~~~~~~~~~~p~~~tr~~VipR~~~~v~~f~~~~~f~fH~~NA~Ee~~~Iv~d~~~~~ 323 (490)
T 2biw_A 247 AIFLQNNVTLNGLPYLFGL---RGAGECVQFHPDKPAQIILVPRDGGEIKRIPVQAGFVFHHANAFEENGKIILDSICYN 323 (490)
T ss_dssp EEEEECCEEECCHHHHTTS---SCGGGGEEECTTSCEEEEEEETTSCCCEEEEECCCEEEEEEEEEEETTEEEEEEEEES
T ss_pred EEEEeCCeEEcHHHHhhcc---CCccceeEeCCCCCcEEEEEECCCCccEEEecCCCeEEecccceecCCeEEEEEeccC
Confidence 9999999999999998653 2222 3455555541 21110
Q ss_pred --c-----------cccccCCCcceEEEEeCCCCCCCCCCceeeeEeccCCccCccccCCCCCCCCcEEEEeecCC--CC
Q psy5322 314 --P-----------RYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRPYTYFYAISADI--DR 378 (476)
Q Consensus 314 --~-----------~~~~~~~~~l~R~~idl~tg~~~~~~~~~~~~l~~~~~EfP~In~~~~Gr~yRy~Y~~~~~~--~~ 378 (476)
. .+....+++|+||+|||+++ .++++.|++.+||||+||++|.||+|||+|++..+. ..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~l~R~~i~l~~g------~v~~~~l~~~~~EfP~In~~~~G~~~Ry~Y~~~~~~~~~~ 397 (490)
T 2biw_A 324 SLPQVDTDGDFRSTNFDNLDPGQLWRFTIDPAAA------TVEKQLMVSRCCEFPVVHPQQVGRPYRYVYMGAAHHSTGN 397 (490)
T ss_dssp CCCCCCTTCCGGGCCGGGSCCCEEEEEEEETTTT------EEEEEEEECSCEEEEECCGGGTTSCCSEEEEEECSSSSSC
T ss_pred CcccccccccccccccccCCCceEEEEEEECCCC------ceEEEeccCCcccccccChhhCCceeeeEEEEeecCCCCC
Confidence 0 01233467999999999998 478888999999999999999999999999988753 34
Q ss_pred CCCCeEEEEeccCCceEEEc-CCCCCCCccEEeeCCCCCCCCCcEEEEEEEeCCCCCceEEEEEeCCCCC--cceEEEEe
Q psy5322 379 DNPGTLIKVNVQNNTCKSWS-QKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQ--ELGRVNFT 455 (476)
Q Consensus 379 ~~~~~l~K~Dl~tg~~~~w~-~~~~~~~EPvFVPrp~~~~EDDG~ll~~v~d~~~~~~s~LlILDA~~l~--~vAr~~l~ 455 (476)
..+++|+|+|++||+.+.|. ++++|+|||+|||||++++|||||||++|+|..+ ++|+|+||||++|+ +|||++|
T Consensus 398 ~~~~~l~K~D~~tg~~~~~~~g~g~~~~EPvFVPrp~~~~EDDG~ll~~V~d~~~-~~S~l~IlDA~~~~~~pvArv~l- 475 (490)
T 2biw_A 398 APLQAILKVDLESGTETLRSFAPHGFAGEPIFVPRPGGVAEDDGWLLCLIYKADL-HRSELVILDAQDITAPAIATLKL- 475 (490)
T ss_dssp CCCCEEEEEETTTTEEEEEECTTTEECCCCEEEECTTCCSTTCEEEEEEEEETTT-TEEEEEEEETTCTTSCCSEEEEC-
T ss_pred CCCCeEEEEECCCCCEEEEECCCCccccCCEEecCCCCCCCCCcEEEEEEEeCCC-CceeEEEEccCCCCcCceEEEeC-
Confidence 56899999999999999997 7999999999999999999999999999999984 79999999999999 4999999
Q ss_pred CCCCCCCCCceeeecC
Q psy5322 456 TPTPVPKCLHGWYFPH 471 (476)
Q Consensus 456 ~P~~vP~gfHG~f~~~ 471 (476)
|++||+||||+|+++
T Consensus 476 -P~rvP~GfHG~wv~~ 490 (490)
T 2biw_A 476 -KHHIPYPLHGSWAQT 490 (490)
T ss_dssp -SSCCCCCCCEEEEEC
T ss_pred -CCcCCCCccccccCC
Confidence 999999999999874
No 4
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=35.88 E-value=85 Score=29.50 Aligned_cols=17 Identities=12% Similarity=0.175 Sum_probs=13.6
Q ss_pred CCeEEEEeccCCceEEE
Q psy5322 381 PGTLIKVNVQNNTCKSW 397 (476)
Q Consensus 381 ~~~l~K~Dl~tg~~~~w 397 (476)
-++|.++|++||+...-
T Consensus 42 ~S~v~~vD~~tgkv~~~ 58 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQR 58 (243)
T ss_dssp SCEEEEEETTTCCEEEE
T ss_pred CceEEEEECCCCCEEEE
Confidence 36899999999987553
No 5
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=32.92 E-value=1.9e+02 Score=28.25 Aligned_cols=79 Identities=9% Similarity=0.016 Sum_probs=45.0
Q ss_pred cEEEEeecCCCCCCCCeEEEEeccCCceEEEcCCCCCCCccEEeeCCCCCCCCCcEEEEEEEe-CC--CC-CceEEEEEe
Q psy5322 367 TYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLW-SH--HP-TRVSLLVLN 442 (476)
Q Consensus 367 Ry~Y~~~~~~~~~~~~~l~K~Dl~tg~~~~w~~~~~~~~EPvFVPrp~~~~EDDG~ll~~v~d-~~--~~-~~s~LlILD 442 (476)
+++|.+....... ...|..+|..+++...-.+.+..+ +..|=| |..+|.+.-.. .. .+ ....+.|+|
T Consensus 33 ~~~yv~~~~~~~~-~~~v~v~D~~t~~~~~~i~~g~~p-~i~~sp-------Dg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 33 RRSYINLPAHHSA-IIQQWVLDAGSGSILGHVNGGFLP-NPVAAH-------SGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CEEEEeCCcccCC-ccEEEEEECCCCeEEEEecCCCCC-CeEECC-------CCCEEEEEeccccccccCCCCCeEEEEE
Confidence 6788764311110 117899999999875433444434 444444 33344442211 00 00 124577999
Q ss_pred CCCCCcceEEEE
Q psy5322 443 ARTMQELGRVNF 454 (476)
Q Consensus 443 A~~l~~vAr~~l 454 (476)
+++++.++++.+
T Consensus 104 ~~t~~~~~~i~~ 115 (373)
T 2mad_H 104 PVTFLPIADIEL 115 (373)
T ss_pred CCCCcEEEEEEC
Confidence 999999999888
No 6
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=31.11 E-value=40 Score=32.20 Aligned_cols=36 Identities=8% Similarity=0.110 Sum_probs=30.2
Q ss_pred eeeeeCCEEEEe-ecCCceeEEcCCCCcccccccCCC
Q psy5322 165 SVYPIQDQVYAL-GDSNYMHRIDPATLDTLEKMDLAR 200 (476)
Q Consensus 165 ~v~~~gg~LlAl-~E~~~p~~iDp~TLeT~G~~d~~g 200 (476)
.|...+++||.+ |..+.-+.+|+.||+.++...+.+
T Consensus 91 Git~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~ 127 (262)
T 3nol_A 91 GISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG 127 (262)
T ss_dssp EEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred EEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC
Confidence 466679999987 557889999999999999988765
No 7
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=28.33 E-value=1.4e+02 Score=30.36 Aligned_cols=79 Identities=9% Similarity=0.051 Sum_probs=46.6
Q ss_pred cEEEEeecCCCCCCCCeEEEEeccCCceEEEcCCCCCCCccEEeeCCCCCCCCCcEEEEEEEe-CC--C-CCceEEEEEe
Q psy5322 367 TYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLW-SH--H-PTRVSLLVLN 442 (476)
Q Consensus 367 Ry~Y~~~~~~~~~~~~~l~K~Dl~tg~~~~w~~~~~~~~EPvFVPrp~~~~EDDG~ll~~v~d-~~--~-~~~s~LlILD 442 (476)
+++|.+........ +.|..+|+.|++...-.+-+..| . ++-.| |..+|.+.-.. .. . +....+.|+|
T Consensus 85 ~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG~~P-g--ia~Sp-----Dgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 85 RRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGGFLP-H--PVAAE-----DGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp TEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEECSSC-E--EEECT-----TSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECCCCC-c--eEECC-----CCCEEEEEeccccccccCCCCCEEEEEE
Confidence 56887654321111 79999999999876443333334 3 33333 23344432211 00 0 0235799999
Q ss_pred CCCCCcceEEEE
Q psy5322 443 ARTMQELGRVNF 454 (476)
Q Consensus 443 A~~l~~vAr~~l 454 (476)
+++++.++++.+
T Consensus 156 ~~t~~vv~~I~v 167 (426)
T 3c75_H 156 PVTFLPIADIEL 167 (426)
T ss_dssp TTTCCEEEEEEE
T ss_pred CCCCcEEEEEEC
Confidence 999999999998
No 8
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=28.21 E-value=46 Score=31.36 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=30.5
Q ss_pred eeeeeCCEEEEe-ecCCceeEEcCCCCcccccccCCC
Q psy5322 165 SVYPIQDQVYAL-GDSNYMHRIDPATLDTLEKMDLAR 200 (476)
Q Consensus 165 ~v~~~gg~LlAl-~E~~~p~~iDp~TLeT~G~~d~~g 200 (476)
.+..++++||.+ |..+.-+.+|+.||+.++.+.+.+
T Consensus 69 Gi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~ 105 (243)
T 3mbr_X 69 GIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG 105 (243)
T ss_dssp EEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS
T ss_pred EEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC
Confidence 566679999987 667889999999999999988764
No 9
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=27.91 E-value=4.2e+02 Score=25.62 Aligned_cols=82 Identities=10% Similarity=0.127 Sum_probs=48.7
Q ss_pred eeeeeCCEEEEeec----------CCceeEEcCCCCcccccccCCCc--cCCCCcCccceecCCCCEEEEEeeeCCCCCe
Q psy5322 165 SVYPIQDQVYALGD----------SNYMHRIDPATLDTLEKMDLARD--VTILHQTSHPLTTSDGETFNLGVTLRPTGPR 232 (476)
Q Consensus 165 ~v~~~gg~LlAl~E----------~~~p~~iDp~TLeT~G~~d~~g~--l~~~~~tAHPk~Dp~Ge~~~~g~~~~~~~~~ 232 (476)
.+-+-|.+||...+ ++....||+.||+.++.....+. ........+..++|+|....+. +... ...
T Consensus 72 ~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~-n~~~-~~~ 149 (373)
T 2mad_H 72 VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFF-QFAA-GPA 149 (373)
T ss_pred EECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEE-ecCC-CCe
Confidence 34444556776542 45678999999999988766421 1001234577899988854443 2221 245
Q ss_pred EEEEEECCCcccceEEEEe-eec
Q psy5322 233 YCILQLNDVADHRVKLVTS-VPV 254 (476)
Q Consensus 233 ~~v~~~~~g~~~~~~~v~~-~~~ 254 (476)
+.++. ..+ +++.+ +++
T Consensus 150 v~viD-~t~-----~~~~~~i~~ 166 (373)
T 2mad_H 150 VGLVV-QGG-----SSDDQLLSS 166 (373)
T ss_pred EEEEE-CCC-----CEEeEEcCC
Confidence 77777 554 45666 654
No 10
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=26.40 E-value=45 Score=32.03 Aligned_cols=37 Identities=5% Similarity=0.064 Sum_probs=30.2
Q ss_pred eeeeeCCEEEEe-ecCCceeEEcCCCCcccccccCCCc
Q psy5322 165 SVYPIQDQVYAL-GDSNYMHRIDPATLDTLEKMDLARD 201 (476)
Q Consensus 165 ~v~~~gg~LlAl-~E~~~p~~iDp~TLeT~G~~d~~g~ 201 (476)
.+...+++||.+ |..+.-+.+|+.||+.++...+.+.
T Consensus 100 Git~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e 137 (268)
T 3nok_A 100 GLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE 137 (268)
T ss_dssp EEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC
T ss_pred EEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc
Confidence 456678899977 5678899999999999999887543
No 11
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=24.44 E-value=5.2e+02 Score=26.90 Aligned_cols=105 Identities=10% Similarity=0.143 Sum_probs=56.3
Q ss_pred eEEEEeCCCCCCCCCCceeeeEeccCCccCccccCCCCCCCCcEEEEeecCCCCCCCCeEEEEecc--CCceEEEcCCCC
Q psy5322 325 LRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQ--NNTCKSWSQKDV 402 (476)
Q Consensus 325 ~R~~idl~tg~~~~~~~~~~~~l~~~~~EfP~In~~~~Gr~yRy~Y~~~~~~~~~~~~~l~K~Dl~--tg~~~~w~~~~~ 402 (476)
.-..||+.++ .+..+.-.........+.+ .-||+|.++. -+.|..+|+. +++...-...
T Consensus 178 ~V~viD~~t~------~v~~~i~~g~~p~~v~~Sp-----DGr~lyv~~~------dg~V~viD~~~~t~~~v~~i~~-- 238 (567)
T 1qks_A 178 QIALIDGSTY------EIKTVLDTGYAVHISRLSA-----SGRYLFVIGR------DGKVNMIDLWMKEPTTVAEIKI-- 238 (567)
T ss_dssp EEEEEETTTC------CEEEEEECSSCEEEEEECT-----TSCEEEEEET------TSEEEEEETTSSSCCEEEEEEC--
T ss_pred eEEEEECCCC------eEEEEEeCCCCccceEECC-----CCCEEEEEcC------CCeEEEEECCCCCCcEeEEEec--
Confidence 4556787776 1333322221222223333 3478997542 2579999996 6654332222
Q ss_pred CCCccEEeeCCCCCCCCCcEEEEEEEeCCCCCceEEEEEeCCCCCcceEEEE
Q psy5322 403 YPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNF 454 (476)
Q Consensus 403 ~~~EPvFVPrp~~~~EDDG~ll~~v~d~~~~~~s~LlILDA~~l~~vAr~~l 454 (476)
..+|.-+.-..-..-|.-||++.-.+ ...+.|+|+.+++.+.++.+
T Consensus 239 -G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 239 -GSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp -CSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEEC
T ss_pred -CCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEec
Confidence 23454333210000134477764433 24688999999998887776
No 12
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=21.01 E-value=2.7e+02 Score=26.15 Aligned_cols=70 Identities=7% Similarity=0.125 Sum_probs=41.7
Q ss_pred EEEEeecCCCCCCCCeEEEEeccCCceEEEc--CCCCCCCccEEeeCCCCCCCCCcEEEEEEEeCCCCCceEEEEEeCCC
Q psy5322 368 YFYAISADIDRDNPGTLIKVNVQNNTCKSWS--QKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNART 445 (476)
Q Consensus 368 y~Y~~~~~~~~~~~~~l~K~Dl~tg~~~~w~--~~~~~~~EPvFVPrp~~~~EDDG~ll~~v~d~~~~~~s~LlILDA~~ 445 (476)
..|.++... .-+.|.++|+.||+...-. +.+.+ +|- +.+. .+.-|++ +.. ...+.|+|+++
T Consensus 33 ~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~~~~f-geG-i~~~-----g~~lyv~----t~~---~~~v~viD~~t 95 (266)
T 2iwa_A 33 TLFESTGLY---GRSSVRQVALQTGKVENIHKMDDSYF-GEG-LTLL-----NEKLYQV----VWL---KNIGFIYDRRT 95 (266)
T ss_dssp EEEEEECST---TTCEEEEEETTTCCEEEEEECCTTCC-EEE-EEEE-----TTEEEEE----ETT---CSEEEEEETTT
T ss_pred eEEEECCCC---CCCEEEEEECCCCCEEEEEecCCCcc-eEE-EEEe-----CCEEEEE----Eec---CCEEEEEECCC
Confidence 677654221 1368999999999976542 22222 232 2222 1222332 222 35799999999
Q ss_pred CCcceEEEE
Q psy5322 446 MQELGRVNF 454 (476)
Q Consensus 446 l~~vAr~~l 454 (476)
++.++++..
T Consensus 96 ~~v~~~i~~ 104 (266)
T 2iwa_A 96 LSNIKNFTH 104 (266)
T ss_dssp TEEEEEEEC
T ss_pred CcEEEEEEC
Confidence 999988776
No 13
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=20.22 E-value=81 Score=30.04 Aligned_cols=38 Identities=24% Similarity=0.282 Sum_probs=31.4
Q ss_pred eeeeCCEEEEe-ecCCceeEEcCCCCcccccccCCCccC
Q psy5322 166 VYPIQDQVYAL-GDSNYMHRIDPATLDTLEKMDLARDVT 203 (476)
Q Consensus 166 v~~~gg~LlAl-~E~~~p~~iDp~TLeT~G~~d~~g~l~ 203 (476)
+-+.+|+|||- |+++..+.|||.|.+-++..++.+..+
T Consensus 177 Le~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~ 215 (262)
T 3nol_A 177 LEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILA 215 (262)
T ss_dssp EEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGG
T ss_pred eEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcc
Confidence 44558999966 678899999999999999999987543
Done!