Your job contains 1 sequence.
>psy5322
MNKRGRQVVDIARYFHHLDNDATIAALERRVENGDSIFDNVDAGVWFRDCHTEVDQPVQG
TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES
YIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGDSN
YMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCILQLND
VADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLIKNSVTNRPLATC
LKFFEKQSNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQ
HQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDE
GVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFPHERKDA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5322
(476 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002937 - symbol:ninaB "neither inactivation nor a... 722 2.2e-117 3
UNIPROTKB|E1C8E0 - symbol:BCO2 "Uncharacterized protein" ... 482 1.4e-66 2
ZFIN|ZDB-GENE-060421-7448 - symbol:bco2b "beta-carotene o... 480 4.8e-66 2
ZFIN|ZDB-GENE-040426-1191 - symbol:bcmo1b "beta-carotene ... 470 9.9e-64 2
UNIPROTKB|Q9YGX2 - symbol:RPE65 "Retinoid isomerohydrolas... 464 2.0e-63 2
UNIPROTKB|Q9I993 - symbol:BCMO1 "Beta,beta-carotene 15,15... 447 2.0e-63 2
ZFIN|ZDB-GENE-040426-1717 - symbol:rpe65a "retinal pigmen... 474 3.3e-63 2
MGI|MGI:2177469 - symbol:Bco2 "beta-carotene oxygenase 2"... 447 3.3e-63 2
ZFIN|ZDB-GENE-081104-505 - symbol:rpe65c "retinal pigment... 478 8.8e-63 2
UNIPROTKB|F1SM94 - symbol:BCO2 "Uncharacterized protein" ... 425 8.8e-63 3
MGI|MGI:98001 - symbol:Rpe65 "retinal pigment epithelium ... 457 1.1e-62 2
RGD|621396 - symbol:Rpe65 "retinal pigment epithelium 65"... 453 2.9e-62 2
UNIPROTKB|F1S830 - symbol:RPE65 "Uncharacterized protein"... 451 1.3e-61 2
UNIPROTKB|F1PXT9 - symbol:RPE65 "Retinoid isomerohydrolas... 452 2.0e-61 2
ZFIN|ZDB-GENE-010509-1 - symbol:bco2l "beta-carotene 15, ... 445 2.0e-61 2
UNIPROTKB|Q9TVB8 - symbol:RPE65 "Retinoid isomerohydrolas... 452 2.6e-61 2
UNIPROTKB|Q16518 - symbol:RPE65 "Retinoid isomerohydrolas... 452 2.6e-61 2
UNIPROTKB|Q28175 - symbol:RPE65 "Retinoid isomerohydrolas... 450 3.3e-61 2
ZFIN|ZDB-GENE-050410-16 - symbol:rpe65b "retinal pigment ... 462 4.2e-61 2
UNIPROTKB|E2RS36 - symbol:BCO2 "Uncharacterized protein" ... 444 4.2e-61 2
MGI|MGI:1926923 - symbol:Bcmo1 "beta-carotene 15,15'-mono... 440 8.8e-61 2
UNIPROTKB|Q8HXG8 - symbol:BCO2 "Beta,beta-carotene 9',10'... 425 7.8e-60 2
UNIPROTKB|Q9BYV7 - symbol:BCO2 "Beta,beta-carotene 9',10'... 432 4.2e-59 2
UNIPROTKB|Q9HAY6 - symbol:BCMO1 "Beta,beta-carotene 15,15... 436 6.1e-58 2
ZFIN|ZDB-GENE-010508-1 - symbol:bcmo1a "beta-carotene 15,... 434 1.3e-57 2
UNIPROTKB|F1N2Z9 - symbol:BCO2 "Uncharacterized protein" ... 437 1.4e-56 2
UNIPROTKB|F1N3B7 - symbol:BCMO1 "Uncharacterized protein"... 425 2.9e-54 2
WB|WBGene00018755 - symbol:bcmo-2 species:6239 "Caenorhab... 399 2.9e-52 2
UNIPROTKB|E9PJJ1 - symbol:BCO2 "Beta,beta-carotene 9',10'... 344 2.7e-49 2
WB|WBGene00012914 - symbol:bcmo-1 species:6239 "Caenorhab... 372 2.3e-46 2
UNIPROTKB|F1P321 - symbol:RPE65 "Retinoid isomerohydrolas... 304 6.0e-43 2
UNIPROTKB|F1NE28 - symbol:RPE65 "Retinoid isomerohydrolas... 304 9.4e-43 2
RGD|70981 - symbol:Bcmo1 "beta-carotene 15,15'-monooxygen... 433 9.6e-41 1
UNIPROTKB|Q91XT5 - symbol:Bcmo1 "Beta,beta-carotene 15,15... 433 9.6e-41 1
RGD|1309022 - symbol:Bco2 "beta-carotene oxygenase 2" spe... 313 1.7e-39 2
RGD|1597300 - symbol:Tex12 "testis expressed 12" species:... 313 1.7e-39 2
TAIR|locus:2134093 - symbol:CCD8 "carotenoid cleavage dio... 254 5.0e-32 2
UNIPROTKB|Q83CU2 - symbol:CBU_1011 "Lignostilbene-alpha,b... 185 1.6e-24 2
TIGR_CMR|CBU_1011 - symbol:CBU_1011 "dioxygenase, putativ... 185 1.6e-24 2
ASPGD|ASPL0000049803 - symbol:AN1704 species:162425 "Emer... 145 1.2e-16 3
UNIPROTKB|G4MX63 - symbol:MGG_08016 "Retinal pigment epit... 132 1.5e-15 3
UNIPROTKB|I3LRK8 - symbol:BCMO1 "Uncharacterized protein"... 200 2.9e-15 1
UNIPROTKB|Q746V1 - symbol:GSU3417 "Dioxygenase, putative"... 172 1.6e-14 2
TIGR_CMR|GSU_3417 - symbol:GSU_3417 "dioxygenase, putativ... 172 1.6e-14 2
TAIR|locus:2134796 - symbol:NCED4 "nine-cis-epoxycaroteno... 166 5.2e-09 1
TAIR|locus:2087418 - symbol:CCD1 "carotenoid cleavage dio... 146 3.1e-08 2
TAIR|locus:2032085 - symbol:NCED9 "nine-cis-epoxycaroteno... 110 8.9e-08 3
UNIPROTKB|O06785 - symbol:MT0683 "Carotenoid cleavage oxy... 114 3.6e-07 3
TAIR|locus:2124489 - symbol:NCED2 "nine-cis-epoxycaroteno... 137 6.6e-06 2
TAIR|locus:2202492 - symbol:NCED5 "nine-cis-epoxycaroteno... 133 2.1e-05 1
TAIR|locus:2093751 - symbol:NCED6 "nine-cis-epoxycaroteno... 126 0.00012 1
TAIR|locus:2091652 - symbol:NCED3 "nine-cis-epoxycaroteno... 122 0.00035 1
ASPGD|ASPL0000046682 - symbol:AN1643 species:162425 "Emer... 95 0.00069 3
>FB|FBgn0002937 [details] [associations]
symbol:ninaB "neither inactivation nor afterpotential B"
species:7227 "Drosophila melanogaster" [GO:0007604
"phototransduction, UV" evidence=IMP] [GO:0016063 "rhodopsin
biosynthetic process" evidence=IDA;IMP] [GO:0007603
"phototransduction, visible light" evidence=IMP] [GO:0007602
"phototransduction" evidence=TAS] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IMP;IDA;NAS] [GO:0016119
"carotene metabolic process" evidence=IDA] [GO:0035238 "vitamin A
biosynthetic process" evidence=IMP;IDA] [GO:0009110 "vitamin
biosynthetic process" evidence=IMP] [GO:0010436 "carotenoid
dioxygenase activity" evidence=IDA] [GO:0042574 "retinal metabolic
process" evidence=IDA] [GO:0004744 "retinal isomerase activity"
evidence=IDA] GO:GO:0042574 GO:GO:0007602 eggNOG:COG3670
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0035238 GO:GO:0016119 GO:GO:0010436 GO:GO:0016063
GO:GO:0004744 EMBL:AB041507 ProteinModelPortal:Q9NKW9 SMR:Q9NKW9
STRING:Q9NKW9 PRIDE:Q9NKW9 FlyBase:FBgn0002937 InParanoid:Q9NKW9
OrthoDB:EOG4TTF03 ArrayExpress:Q9NKW9 Bgee:Q9NKW9 Uniprot:Q9NKW9
Length = 620
Score = 722 (259.2 bits), Expect = 2.2e-117, Sum P(3) = 2.2e-117
Identities = 133/285 (46%), Positives = 184/285 (64%)
Query: 30 RVENGDSIFDNVDAGVWFRDCHTEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESF 89
R++ ++ N + VW R C E+ P++G G IP WI G L+RNGPGSW VG+ +F
Sbjct: 29 RLDGNGRLYPNCSSDVWLRSCEREIVDPIEGHHSGHIPKWICGSLLRNGPGSWKVGDMTF 88
Query: 90 DHLFDCSGLLHRFKISSGLVTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQ 149
HLFDCS LLHRF I +G VTYQ +F+ +E+ KN +A+RIVVT FGT VPDPC SIF
Sbjct: 89 GHLFDCSALLHRFAIRNGRVTYQNRFVDTETLRKNRSAQRIVVTEFGTAAVPDPCHSIFD 148
Query: 150 RIATLFKP--GSDNTLVSVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQ 207
R A +F+P G+DN+++S+YP DQ Y ++ +MHRI+P TL T ++ V +++
Sbjct: 149 RFAAIFRPDSGTDNSMISIYPFGDQYYTFTETPFMHRINPCTLATEARICTTDFVGVVNH 208
Query: 208 TSHPLTTSDGETFNLGVTLRPTGPRYCILQL--NDVADHRVKLVTSVPVRWKFHPGYMHT 265
TSHP G +NLG T+ +GP Y IL + +V ++P RWK HPGYMHT
Sbjct: 209 TSHPHVLPSGTVYNLGTTMTRSGPAYTILCFPHGEQMFEDAHVVATLPCRWKLHPGYMHT 268
Query: 266 FAMTPHYFIIVEQPLSISVPRLIKNSVTNRPLATCLKFFEKQSNI 310
F +T HYF+IVEQPLS+S+ IK + + L+ CLK+FE + +
Sbjct: 269 FGLTDHYFVIVEQPLSVSLTEYIKAQLGGQNLSACLKWFEDRPTL 313
Score = 385 (140.6 bits), Expect = 2.2e-117, Sum P(3) = 2.2e-117
Identities = 71/133 (53%), Positives = 100/133 (75%)
Query: 341 KVRPSVICDVGCETPRMNGQ-HQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQ 399
++RP ++CD GCETPR+ + + G+ Y YFYAIS+D+D NPGTLIKV+V N +C +W +
Sbjct: 486 QLRPEMLCDWGCETPRIYYERYMGKNYRYFYAISSDVDAVNPGTLIKVDVWNKSCLTWCE 545
Query: 400 KDVYPSEPVFVATPNAVKEDEGVLL-SVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPT 458
++VYPSEP+FV +P+ ED+GV+L S++L + V L+VL A+TM ELGR +F T
Sbjct: 546 ENVYPSEPIFVPSPDPKSEDDGVILASMVLGGLNDRYVGLIVLCAKTMTELGRCDFHTNG 605
Query: 459 PVPKCLHGWYFPH 471
PVPKCLHGW+ P+
Sbjct: 606 PVPKCLHGWFAPN 618
Score = 84 (34.6 bits), Expect = 2.2e-117, Sum P(3) = 2.2e-117
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 291 SVTNRPLATCLKFFEKQSNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGK 341
S N + C+ + E +N+ + P YA +FR RPLRF L L + A K
Sbjct: 354 SYRNPEMINCM-YLEAIANMQTNPNYATLFRGRPLRFVLPLGTIPPASIAK 403
>UNIPROTKB|E1C8E0 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016116
"carotenoid metabolic process" evidence=IEA] [GO:0016121 "carotene
catabolic process" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0051881 "regulation of mitochondrial membrane potential"
evidence=IEA] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] GO:GO:0055114
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121 EMBL:AADN02058015
IPI:IPI00602723 Ensembl:ENSGALT00000012775 Uniprot:E1C8E0
Length = 548
Score = 482 (174.7 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 97/266 (36%), Positives = 155/266 (58%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E +P+ ++G IP WI+G L+RNGPG + GEE ++H FD LLH+F++ +G VTYQ
Sbjct: 36 ETPEPIPAKIKGHIPGWINGNLLRNGPGKFEFGEEKYNHWFDGMALLHQFQLRNGTVTYQ 95
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG--SDNTLVSVYPIQ 170
KF++S SY+ N+ RIVV+ FGT +PDPC S+F R + F P SDN VS +
Sbjct: 96 SKFLQSNSYLINNQHNRIVVSEFGTLAMPDPCKSVFARFMSRFDPPKPSDNANVSYVVYK 155
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG 230
Y G++N M+++DP TL+ EK+D + V + T+HP DG +N+G + G
Sbjct: 156 GDYYVTGENNCMYKVDPETLEMKEKVDWTKFVAVNGATAHPHYAPDGTAYNMGNSYGKFG 215
Query: 231 PRYCILQL-------NDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ N+ + K++ S+ P Y H+F M+ +Y I +EQP+ ++
Sbjct: 216 TTYNIIEVPPQKSNCNETLEG-AKVLCSIAPTDNMKPSYYHSFGMSENYIIFIEQPIKLN 274
Query: 284 VPRLIKNSVTNRPLATCLKFFEKQSN 309
+ R+I + +P++ + + E Q N
Sbjct: 275 LLRIITSKFRGKPISEGINW-EPQYN 299
Score = 213 (80.0 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 51/118 (43%), Positives = 65/118 (55%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++N Q+ GR Y YFY R G +L+KV+V+ K W + YPSEPV
Sbjct: 431 GLEFPQINYSQYSGRKYRYFYGCGF---RHFIGDSLMKVDVETKNFKIWQEDGSYPSEPV 487
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHG 466
FV PNA ED GV+LSV++ LLVL+A T +ELGR P +P HG
Sbjct: 488 FVPVPNATAEDSGVILSVVISPDENRSAFLLVLDAETFRELGRAE--VPVQMPYGFHG 543
Score = 37 (18.1 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 359 GQHQGRPYTYFYAISADIDR 378
GQ +P+ F+ I+A DR
Sbjct: 315 GQWYTKPFVTFHQINAFEDR 334
>ZFIN|ZDB-GENE-060421-7448 [details] [associations]
symbol:bco2b "beta-carotene oxygenase 2b"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-060421-7448 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 KO:K10252 OrthoDB:EOG45B1FD EMBL:BX572648
EMBL:BC115259 IPI:IPI00758725 RefSeq:NP_001035402.1
UniGene:Dr.82050 Ensembl:ENSDART00000061139 GeneID:678554
KEGG:dre:678554 CTD:678554 InParanoid:Q1RLW1 OMA:LWHIGDY
NextBio:20902398 Uniprot:Q1RLW1
Length = 555
Score = 480 (174.0 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 101/278 (36%), Positives = 156/278 (56%)
Query: 30 RVENGDSIFDNVDA--GVWFRDCHT-EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGE 86
R +N D F +V + C E +P+ T+ G +PSWI G +RNGPG + +G
Sbjct: 18 RPKNKDQYFTDVHGLPSIEKLICSADETPEPITTTITGNVPSWIKGNFLRNGPGKFEIGR 77
Query: 87 ESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCAS 146
SF+H FD LLH+F I G VTY +F+ S+SY +N RI+V+ FGT +PDPC +
Sbjct: 78 SSFNHWFDGMALLHQFHIEDGKVTYMSRFLNSDSYKENLEHNRIIVSEFGTVAMPDPCKN 137
Query: 147 IFQRIATLFK-PG-SDNTLVSVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTI 204
FQR + F+ P SDN VS + Y ++N+MH+IDP TL+T EK+D ++ + +
Sbjct: 138 FFQRFLSRFELPKLSDNANVSFVQYKGDYYVSTETNFMHKIDPETLETKEKVDWSKFIAV 197
Query: 205 LHQTSHPLTTSDGETFNLGVTLRPTGPRYCILQL-------NDVADHRVKLVTSVPVRWK 257
T+HP SDG T+N+G + G Y I+ + ND + +V S+P K
Sbjct: 198 NGATAHPHVDSDGTTYNMGNSYTVKGAFYNIIMVPPNKENPNDTLEG-ASVVCSIPSEDK 256
Query: 258 FHPGYMHTFAMTPHYFIIVEQPLSISVPRLIKNSVTNR 295
P Y H+FAM+ +Y + +EQP+ + + +++ + +
Sbjct: 257 SKPSYYHSFAMSENYVVFIEQPIKMDLLKIVTGKLRGK 294
Score = 210 (79.0 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 48/120 (40%), Positives = 68/120 (56%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P +N PY YFY R G +LIK+++Q K W ++PSEPV
Sbjct: 439 GLEFPHINYSMCNSHPYRYFYGCGF---RHLVGDSLIKMDLQGKQIKVWKHAGMFPSEPV 495
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV++P AV+ED+GV+LSV++ + LLVL+A+T +ELGR P +P HG +
Sbjct: 496 FVSSPGAVEEDDGVILSVVITPNQDKSTFLLVLDAKTFEELGRAE--VPKNIPYGFHGTF 553
>ZFIN|ZDB-GENE-040426-1191 [details] [associations]
symbol:bcmo1b "beta-carotene 15,15'-monooxygenase
1b" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040426-1191 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:BC056789 IPI:IPI00503910
RefSeq:NP_956902.1 UniGene:Dr.84019 ProteinModelPortal:Q6PGY1
STRING:Q6PGY1 GeneID:393580 KEGG:dre:393580 CTD:393580
InParanoid:Q6PGY1 NextBio:20814600 Uniprot:Q6PGY1
Length = 525
Score = 470 (170.5 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 99/272 (36%), Positives = 152/272 (55%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E +P++ V G IP W+ G L+RNGPG ++VG S+ H FD L+H F G V Y+
Sbjct: 11 ETPEPLKADVSGSIPPWLQGTLLRNGPGLFSVGNTSYKHWFDGMALIHSFTFKDGEVFYR 70
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLVSVYP 168
K++KSE+Y KN AA RIVV+ FGT PDPC +IF R + P +DN L+++
Sbjct: 71 SKYLKSETYKKNIAADRIVVSEFGTMVYPDPCKNIFSRAFSYMMNAIPDFTDNNLINIIK 130
Query: 169 IQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRP 228
+ YA + NY+++IDP TL+TL + + + I T+HP +G T+N+G +
Sbjct: 131 YGEDYYASSEVNYINQIDPLTLETLGRTNYRNHIAINLATAHPHYDEEGNTYNMGTAIMN 190
Query: 229 TG-PRYCILQL----NDVADHR-----VKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQ 278
G P+Y I ++ +D + + V+ V S+P+R +P Y H+F MT +Y I VEQ
Sbjct: 191 LGRPKYVIFKVPANTSDKENKKPALSEVEQVCSIPIRPSLYPSYFHSFGMTENYIIFVEQ 250
Query: 279 PLSISVPRLIKNSVTNRPLATCLKFFEKQSNI 310
+ + +L + +CLKF + N+
Sbjct: 251 AFKLDIVKLATAYFRDINWGSCLKFDQDDINV 282
Score = 198 (74.8 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 48/131 (36%), Positives = 76/131 (58%)
Query: 344 PSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVY 403
P +I G E P +N + + YFY + P + KV+V T K W++++ Y
Sbjct: 399 PDIIFK-GLELPAINYKFNSKKNRYFYGTRVEWS-PYPNKVAKVDVVTRTHKIWTEEECY 456
Query: 404 PSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPK 462
PSEPVF+A+P+AV ED+GV+LS ++ S +P R L+VL+A++ +E+ R T +
Sbjct: 457 PSEPVFIASPDAVDEDDGVILSSVV-SFNPQRPPFLVVLDAKSFKEIARA--TIDASIHM 513
Query: 463 CLHGWYFPHER 473
LHG F H++
Sbjct: 514 DLHG-LFIHDK 523
Score = 40 (19.1 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 7/38 (18%), Positives = 20/38 (52%)
Query: 364 RPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKD 401
+P + + ++D++ P + V +Q+ T + ++D
Sbjct: 355 QPVCQRFVLPVNVDKETPQDINLVKLQDTTATAVLKED 392
>UNIPROTKB|Q9YGX2 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0052884 "all-trans-retinyl-palmitate hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052885
"all-trans-retinyl-ester hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] GO:GO:0005783
GO:GO:0005886 GO:GO:0046872 GO:GO:0007601 GO:GO:0050896
GO:GO:0016853 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AB017594 IPI:IPI00584895
RefSeq:NP_990215.1 UniGene:Gga.408 ProteinModelPortal:Q9YGX2
STRING:Q9YGX2 GeneID:395700 KEGG:gga:395700 InParanoid:Q9YGX2
NextBio:20815770 Uniprot:Q9YGX2
Length = 533
Score = 464 (168.4 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 91/247 (36%), Positives = 152/247 (61%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ PV V G IP+W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPVTAHVTGRIPTWLRGSLLRCGPGLFEVGAEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+F+++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV+VYP+
Sbjct: 81 RRFVRTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL + V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQLNDV-AD-----HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ + AD ++ ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SLAYNIIRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LLKFLSS 267
Score = 201 (75.8 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 44/118 (37%), Positives = 69/118 (58%)
Query: 353 ETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N ++ G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYKKYGGKPYTYTYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLW-SHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LS+++ P LL+LNA+ M E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVNIPVT--FHGLF 530
Score = 40 (19.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 193 LEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRY 233
++K D +++ L T+ T ET L + +GPR+
Sbjct: 374 IDKADTGKNLVTLPYTTATATLRSDETVWLEPEVIFSGPRH 414
>UNIPROTKB|Q9I993 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9031 "Gallus gallus" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA]
[GO:0001523 "retinoid metabolic process" evidence=IDA]
UniPathway:UPA00912 GO:GO:0046872 GO:GO:0004497 GO:GO:0042572
GO:GO:0001523 EMBL:AJ271386 IPI:IPI00595044 RefSeq:NP_989966.1
UniGene:Gga.41 STRING:Q9I993 Ensembl:ENSGALT00000008685
GeneID:395346 KEGG:gga:395346 CTD:53630 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InParanoid:Q9I993 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 BioCyc:MetaCyc:MONOMER-17624 NextBio:20815431
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Uniprot:Q9I993
Length = 526
Score = 447 (162.4 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 93/278 (33%), Positives = 154/278 (55%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E +P++ V+G +P+W+ GVL+RNGPG +G+ ++H FD LLH F +G V Y+
Sbjct: 11 EHPEPIKAEVQGQLPTWLQGVLLRNGPGMHTIGDTKYNHWFDGLALLHSFTFKNGEVYYR 70
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLVSVYP 168
K+++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+++
Sbjct: 71 SKYLRSDTYNCNIEANRIVVSEFGTMAYPDPCKNIFAKAFSYLSHTIPEFTDNCLINIMK 130
Query: 169 IQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRP 228
D YA ++N++ +IDP TL+TL+K+D ++ V + TSHP S G N+G ++
Sbjct: 131 TGDDYYATSETNFIRKIDPQTLETLDKVDYSKYVAVNLATSHPHYDSAGNILNMGTSIVD 190
Query: 229 TG-PRYCILQL-NDVADHRVK--------LVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQ 278
G +Y + ++ + V + K +V S+P R P Y H+F +T +Y + +EQ
Sbjct: 191 KGRTKYVLFKIPSSVPEKEKKKSCFKHLEVVCSIPSRSLLQPSYYHSFGITENYIVFIEQ 250
Query: 279 PLSISVPRLIKNSVTNRPLATCLKFFEKQSN-IHSTPR 315
P + + +L + A+CL F ++ H R
Sbjct: 251 PFKLDIVKLATAYIRGVNWASCLSFHKEDKTWFHFVDR 288
Score = 218 (81.8 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 47/128 (36%), Positives = 72/128 (56%)
Query: 343 RPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDV 402
+P ++C+ G E PR+N + G+ Y Y YA P + K+NVQ W +
Sbjct: 394 QPEILCE-GIELPRVNYDYNGKKYKYVYATEVQWS-PVPTKIAKLNVQTKEVLHWGEDHC 451
Query: 403 YPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPK 462
+PSEP+FV +P+A +EDEGV+L+ ++ S LL+L+A+T +ELGR T +
Sbjct: 452 WPSEPIFVPSPDAREEDEGVVLTCVVVSEPNKAPFLLILDAKTFKELGRA--TVNVEMHL 509
Query: 463 CLHGWYFP 470
LHG + P
Sbjct: 510 DLHGMFIP 517
>ZFIN|ZDB-GENE-040426-1717 [details] [associations]
symbol:rpe65a "retinal pigment epithelium-specific
protein 65a" species:7955 "Danio rerio" [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
ZFIN:ZDB-GENE-040426-1717 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AY646886 EMBL:FP102801 EMBL:BC059559
IPI:IPI00485811 RefSeq:NP_957045.1 UniGene:Dr.12451
ProteinModelPortal:Q6PBW5 STRING:Q6PBW5 Ensembl:ENSDART00000004533
GeneID:393724 KEGG:dre:393724 CTD:393724 InParanoid:Q6PBW5
OMA:TSMEFPR OrthoDB:EOG47M1XK NextBio:20814725 Bgee:Q6PBW5
GO:GO:0052885 GO:GO:0052884 Uniprot:Q6PBW5
Length = 531
Score = 474 (171.9 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 101/270 (37%), Positives = 161/270 (59%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+++P+ TV G IPS+I G L+R GPG + G E F HLFD L+H+F S+G VTY
Sbjct: 21 ELNEPLPATVTGRIPSFIKGSLLRLGPGLFEAGAEPFYHLFDGQALMHKFDFSNGQVTYF 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
KF+K+++Y++ +R+V+T FGT PDPC +IF R + FK +DN LV+VYPI
Sbjct: 81 RKFVKTDAYVRAITEKRVVITEFGTCAYPDPCKNIFSRFFSYFKGVEVTDNCLVNVYPIG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA+ ++NY+ +++ TL+TL+K+D+ V I T+HP DG +N+G + +
Sbjct: 141 EDFYAVTETNYITKVNVDTLETLKKVDMCNYVNINGVTAHPHIERDGTVYNIGNCMGKGA 200
Query: 230 GPRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ D +D + K+V P +F P Y+H+F MT +YF+ VE P+ I+
Sbjct: 201 SLAYNIVRIPPTQKDKSDPIEKSKVVVQFPSAERFKPSYVHSFGMTENYFVFVETPVKIN 260
Query: 284 VPRLIKN-SVTNRPLATCLKFFEKQSN-IH 311
+ + + S+ C + E++ IH
Sbjct: 261 LLKFLSAWSIRGSNYMDCFESDEEKGTWIH 290
Score = 189 (71.6 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 43/121 (35%), Positives = 68/121 (56%)
Query: 353 ETPRMNGQH-QGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N + G+ YTY Y + ++ P + K+NV+ W + D YPSEP+FV
Sbjct: 417 EFPQINYRMVNGKNYTYAYGLG--LNHFVPDRICKLNVRTKETWVWQEPDSYPSEPLFVQ 474
Query: 412 TPNAVKEDEGVLLSVLL--WSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYF 469
TP+ V ED+G+L+++++ + PT L+LNA+ + E+ R TPV HG Y
Sbjct: 475 TPDGVDEDDGILMTIVVSPGAQRPTYC--LILNAKDLSEIARAEVEILTPVT--FHGMYK 530
Query: 470 P 470
P
Sbjct: 531 P 531
>MGI|MGI:2177469 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IC] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016116 "carotenoid metabolic
process" evidence=IMP] [GO:0016119 "carotene metabolic process"
evidence=ISO;IDA] [GO:0016121 "carotene catabolic process"
evidence=ISO;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISO;IDA] [GO:0042573 "retinoic
acid metabolic process" evidence=NAS] [GO:0042574 "retinal
metabolic process" evidence=NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051881 "regulation of mitochondrial membrane
potential" evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=ISO;IDA] [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IMP] MGI:MGI:2177469
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE OrthoDB:EOG45B1FD
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 EMBL:AJ290392
IPI:IPI00118726 RefSeq:NP_573480.1 UniGene:Mm.390149
ProteinModelPortal:Q99NF1 SMR:Q99NF1 PhosphoSite:Q99NF1
PaxDb:Q99NF1 PRIDE:Q99NF1 Ensembl:ENSMUST00000119103 GeneID:170752
KEGG:mmu:170752 InParanoid:Q99NF1 NextBio:370330 Bgee:Q99NF1
Genevestigator:Q99NF1 GermOnline:ENSMUSG00000032066 Uniprot:Q99NF1
Length = 532
Score = 447 (162.4 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 90/260 (34%), Positives = 152/260 (58%)
Query: 58 VQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIK 117
V V G IP W++G L+R GPG + G++ ++H FD LLH+F++ G VTY+ KF++
Sbjct: 25 VSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFRMERGTVTYKSKFLQ 84
Query: 118 SESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS--DNTLVSVYPIQDQVYA 175
S++Y N A RIV++ FGT +PDPC SIF+R + F+P + DNT V+ + Y
Sbjct: 85 SDTYKANSAGGRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTNVNFVQYKGDYYM 144
Query: 176 LGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCI 235
++N+M+++D L+ EK+D ++ + + T+HP DG +N+G + P G Y I
Sbjct: 145 STETNFMNKVDIEMLERTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSYGPRGSCYNI 204
Query: 236 LQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLIK 289
+++ + + H +++ S+ K P Y H+F MT +Y I VEQP+ + + ++I
Sbjct: 205 IRVPPKKKEPGETIHGAQVLCSIASTEKMKPSYYHSFGMTKNYIIFVEQPVKMKLWKIIT 264
Query: 290 NSVTNRPLATCLKFFEKQSN 309
+ + +P A + + E Q N
Sbjct: 265 SKIRGKPFADGISW-EPQYN 283
Score = 216 (81.1 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 50/122 (40%), Positives = 71/122 (58%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++N G+ G+ Y++FY R G +LIKV+V N T + W ++ YPSEPV
Sbjct: 415 GIEFPQINYGRFNGKKYSFFYGCGF---RHLVGDSLIKVDVTNKTLRVWREEGFYPSEPV 471
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV P A +ED GV+LSV++ + LLVL+A++ ELGR P +P HG +
Sbjct: 472 FVPVPGADEEDSGVILSVVITPNQSESNFLLVLDAKSFTELGRAE--VPVQMPYGFHGTF 529
Query: 469 FP 470
P
Sbjct: 530 VP 531
>ZFIN|ZDB-GENE-081104-505 [details] [associations]
symbol:rpe65c "retinal pigment epithelium-specific
protein 65c" species:7955 "Danio rerio" [GO:0008152 "metabolic
process" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0050251 "retinol isomerase
activity" evidence=IDA] ZFIN:ZDB-GENE-081104-505
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:CR759968 Ensembl:ENSDART00000038725
Uniprot:K9J6Q0
Length = 532
Score = 478 (173.3 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
Identities = 94/270 (34%), Positives = 161/270 (59%)
Query: 47 FRDCHTEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISS 106
F C E+ +P+ V G IP+W+ G L+R GPG + VG+E F HLFD LLH+F +
Sbjct: 16 FESCE-ELAEPIPAHVSGEIPAWLSGSLLRMGPGLFEVGDEPFYHLFDGQALLHKFDLKD 74
Query: 107 GLVTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLV 164
G VTY +FI++++Y++ +R+V+T FGT PDPC +IF R T F+ +DN LV
Sbjct: 75 GRVTYHRRFIRTDAYVRAMTEKRVVITEFGTTAYPDPCKNIFSRFFTYFQGIEVTDNCLV 134
Query: 165 SVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGV 224
++YPI + YA ++N++ ++DP TL+T++K+DL +++ T+HP +DG +N+G
Sbjct: 135 NIYPIGEDFYACTETNFITKVDPDTLETVKKVDLCNYLSVNGLTAHPHIEADGTVYNIGN 194
Query: 225 TL-RPTGPRYCILQL----NDVADH--RVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVE 277
+ Y I+++ D +D + K++ P +F P Y+H+F +T ++F+ VE
Sbjct: 195 CFGKNMSLAYNIVKIPPLQEDKSDQFEKSKILVQFPSSERFKPSYVHSFGITENHFVFVE 254
Query: 278 QPLSISVPRLIKN-SVTNRPLATCLKFFEK 306
P+ I++ + + + S+ C + +K
Sbjct: 255 TPVKINLLKFLTSWSIRGSNYMDCFESNDK 284
Score = 181 (68.8 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
Identities = 42/120 (35%), Positives = 67/120 (55%)
Query: 353 ETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N + G+ YT+ Y + ++ P + K+NV++ W + D YPSEP+FV
Sbjct: 417 EFPQINYSKFNGKDYTFAYGLG--LNHFVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQ 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 470
+P+A ED+GVLLS+++ R + LL+L A + E+ R +P LHG Y P
Sbjct: 475 SPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAE--VDVLIPLTLHGIYKP 532
>UNIPROTKB|F1SM94 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE
GO:GO:0016121 EMBL:CU657951 RefSeq:XP_003129902.2 UniGene:Ssc.25348
Ensembl:ENSSSCT00000016405 GeneID:100517547 KEGG:ssc:100517547
Uniprot:F1SM94
Length = 575
Score = 425 (154.7 bits), Expect = 8.8e-63, Sum P(3) = 8.8e-63
Identities = 86/265 (32%), Positives = 153/265 (57%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E + + V G +P W++G L+R GPG + G++ ++H FD LLH+FKI G V Y+
Sbjct: 63 ETPKIISAQVRGHVPKWLNGYLLRIGPGKFEFGKDKYNHWFDGMALLHQFKIEKGTVMYR 122
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-SDNTLVSVYPIQ 170
KF++S++Y N RIVV+ FGT +PDPC +IF+R + F+ P +DNT V+ +
Sbjct: 123 SKFLQSDTYKANSVHDRIVVSEFGTLALPDPCKNIFERFMSKFELPAMTDNTNVNYVQYK 182
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG 230
Y ++N+M+++D TL+ EK+D ++ + + T+HP DG +N+G + G
Sbjct: 183 GDYYLSTETNFMNKVDIETLEKKEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGSHG 242
Query: 231 PRYCILQLN-DVAD-----HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISV 284
Y ++++ + AD H +++ S+ + P Y H+F MT +Y I +EQP+ +++
Sbjct: 243 SCYHVIRVPPEKADLEETIHGAQVICSIASAERMKPSYYHSFGMTRNYIIFIEQPVKMNL 302
Query: 285 PRLIKNSVTNRPLATCLKFFEKQSN 309
++I + + + + + + E Q N
Sbjct: 303 WKIITSKIRGKAFSDGISW-EPQYN 326
Score = 209 (78.6 bits), Expect = 8.8e-63, Sum P(3) = 8.8e-63
Identities = 49/120 (40%), Positives = 68/120 (56%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++N GQ G+ Y +FY R G +LIKV+V N T W ++ YPSEP+
Sbjct: 458 GVEFPQINYGQFSGKKYRFFYGCGF---RHLVGDSLIKVDVVNKTLTVWREESFYPSEPI 514
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV P +ED GV+LSV++ + R LLVL+A+ +ELGR P +P HG +
Sbjct: 515 FVPVPGTNEEDGGVILSVVITPNQNERNFLLVLDAKNFEELGRAE--VPVQMPYGFHGTF 572
Score = 37 (18.1 bits), Expect = 8.8e-63, Sum P(3) = 8.8e-63
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 316 YAQMFRARPLRFRLDLASPRTAPTGK 341
Y + R+ P RF L L AP G+
Sbjct: 396 YNSVARSFPRRFVLPLHVSLNAPEGE 421
>MGI|MGI:98001 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10090
"Mus musculus" [GO:0004744 "retinal isomerase activity"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0008286 "insulin receptor signaling pathway" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IMP]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0071257 "cellular response to electrical stimulus"
evidence=IMP] MGI:MGI:98001 GO:GO:0005783 GO:GO:0005886
GO:GO:0008286 GO:GO:0046872 GO:GO:0007601 GO:GO:0042574
eggNOG:COG3670 HOGENOM:HOG000232156 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090
GO:GO:0007468 GO:GO:0071257 GO:GO:0060042 GO:GO:0004744
OrthoDB:EOG47M1XK GO:GO:0052885 GO:GO:0052884 EMBL:AF410461
EMBL:AC163272 EMBL:AH011240 IPI:IPI00131304 UniGene:Mm.131708
ProteinModelPortal:Q91ZQ5 SMR:Q91ZQ5 STRING:Q91ZQ5
PhosphoSite:Q91ZQ5 PRIDE:Q91ZQ5 InParanoid:Q91ZQ5 CleanEx:MM_RPE65
Genevestigator:Q91ZQ5 GermOnline:ENSMUSG00000028174 Uniprot:Q91ZQ5
Length = 533
Score = 457 (165.9 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 90/247 (36%), Positives = 150/247 (60%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFKGVEVTDNALVNIYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL +++ T+HP SDG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYISVNGATAHPHIESDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQLNDV-AD-----HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ + AD ++ ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 TVAYNIIKIPPLKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 201 (75.8 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 353 ETPRMNGQH-QGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKFGGKPYTYAYGLG--LNHFVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + + LLVLNA+ + E+ R T PV HG +
Sbjct: 475 QPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSEIARAEVETNIPVT--FHGLF 530
Score = 52 (23.4 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 192 TLEKMDLARD-VTILHQTSHPLTTSDGETFNLGVTLRPTGPR 232
T++K+D R+ VT+ H T+ SD ET L + +GPR
Sbjct: 373 TIDKVDTGRNLVTLPHTTATATLRSD-ETIWLEPEVLFSGPR 413
>RGD|621396 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] [GO:0042574 "retinal
metabolic process" evidence=IMP] [GO:0044297 "cell body"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IMP]
RGD:621396 GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 GO:GO:0042574 GO:GO:0044297
GO:GO:0001654 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF035673 IPI:IPI00196676
RefSeq:NP_446014.1 UniGene:Rn.76724 ProteinModelPortal:O70276
GeneID:89826 KEGG:rno:89826 NextBio:617740 Genevestigator:O70276
Uniprot:O70276
Length = 533
Score = 453 (164.5 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 90/247 (36%), Positives = 150/247 (60%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSTPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYY 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL V++ T+HP SDG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIESDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQLNDV-AD-----HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ + AD ++ ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 TVAYNIIKIPPLKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 201 (75.8 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 353 ETPRMNGQH-QGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKCGGKPYTYAYGLG--LNHFVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + + LLVLNA+ + E+ R T PV HG +
Sbjct: 475 QPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSEIARAEVETNIPVT--FHGLF 530
Score = 53 (23.7 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 192 TLEKMDLARD-VTILHQTSHPLTTSDGETFNLGVTLRPTGPR 232
T++K D R+ VT+ H T+ + SD ET L + +GPR
Sbjct: 373 TIDKADTGRNLVTLPHTTATAILCSD-ETIWLEPEVLFSGPR 413
>UNIPROTKB|F1S830 [details] [associations]
symbol:RPE65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071257 "cellular response to electrical stimulus"
evidence=IEA] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0004744
"retinal isomerase activity" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:CU929726 Ensembl:ENSSSCT00000004199
Uniprot:F1S830
Length = 533
Score = 451 (163.8 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 89/247 (36%), Positives = 149/247 (60%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQLNDV-ADH-----RVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ + AD + ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SIAYNIVKIPPLQADKQDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 197 (74.4 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 45/118 (38%), Positives = 70/118 (59%)
Query: 353 ETPRMNGQ-HQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q + G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FVA
Sbjct: 417 EFPQINYQKYGGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVA 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 38 (18.4 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 193 LEKMDLARD-VTILHQTSHPLTTSDGETFNLGVTLRPTGPR 232
++K D ++ VT+ + T+ + SD ET L + +GPR
Sbjct: 374 IDKADTGKNLVTLPNTTATAILCSD-ETIWLEPEVLFSGPR 413
>UNIPROTKB|F1PXT9 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:WLHVADK EMBL:AAEX03004935
EMBL:AAEX03004936 Ensembl:ENSCAFT00000032537 Uniprot:F1PXT9
Length = 533
Score = 452 (164.2 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 90/247 (36%), Positives = 149/247 (60%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQLNDV-ADH-----RVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ + AD + ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SIAYNIVKIPPLQADKEDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LLKFLSS 267
Score = 194 (73.4 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 44/118 (37%), Positives = 70/118 (59%)
Query: 353 ETPRMNGQ-HQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q + G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKYGGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 41 (19.5 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 193 LEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPR 232
++K D +++ L T+ T ET L + +GPR
Sbjct: 374 IDKADTGKNLVTLPNTTATATLRSDETIWLEPEVLFSGPR 413
>ZFIN|ZDB-GENE-010509-1 [details] [associations]
symbol:bco2l "beta-carotene 15, 15-dioxygenase 2,
like" species:7955 "Danio rerio" [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
ZFIN:ZDB-GENE-010509-1 GO:GO:0016702 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AJ290391
IPI:IPI00493963 RefSeq:NP_571874.1 UniGene:Dr.79440 GeneID:84041
KEGG:dre:84041 CTD:84041 InParanoid:Q90WH3 NextBio:20934203
ArrayExpress:Q90WH3 Uniprot:Q90WH3
Length = 549
Score = 445 (161.7 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 89/241 (36%), Positives = 141/241 (58%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ ++G IPSWI+G +RNGPG + GE F H FD L+HRF I G VTY
Sbjct: 36 EIPDPITTLIKGQIPSWINGSFLRNGPGKFEFGESKFTHWFDGMALMHRFNIKDGQVTYS 95
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PGS-DNTLVSVYPIQ 170
+F++S+SY++N RIVV+ FGT PDPC +IF R + F+ P + DN V+ +
Sbjct: 96 SRFLQSDSYVQNSEKNRIVVSEFGTLATPDPCKNIFARFFSRFQIPKTTDNAGVNFVKYK 155
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG 230
Y ++N+M +IDP +L+T EK+D ++ + + T+HP +G T+N+G + G
Sbjct: 156 GDFYVSTETNFMRKIDPVSLETKEKVDWSKFIAVSAATAHPHYDREGATYNMGNSYGRKG 215
Query: 231 PRYCILQL------NDVAD-HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y IL++ +D AD +++ S+P P Y H+F M+ +Y + +EQP+ +
Sbjct: 216 FFYHILRVPPGEKQDDDADLSGAEILCSIPAADPRKPSYYHSFVMSENYIVFIEQPIKLD 275
Query: 284 V 284
+
Sbjct: 276 L 276
Score = 201 (75.8 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 44/120 (36%), Positives = 67/120 (55%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAIS-ADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++N + RPY YFYA + D+ L+K++++ K W ++PSEPV
Sbjct: 431 GLEFPQINYANYNARPYRYFYACGFGHVFGDS---LLKMDLEGKKLKVWRHAGLFPSEPV 487
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
F+ P+A ED+GV++SV++ LLVL+A+T ELGR P +P HG +
Sbjct: 488 FIPAPDAQDEDDGVVMSVIITPREKKSSFLLVLDAKTFTELGRAE--VPVDIPYGTHGLF 545
>UNIPROTKB|Q9TVB8 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0031090 "organelle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0052885 "all-trans-retinyl-ester hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] GO:GO:0005783 GO:GO:0005886 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF084537
EMBL:Y16567 EMBL:AJ506754 EMBL:AJ506755 EMBL:AJ506756 EMBL:AJ506757
EMBL:AJ251207 EMBL:AJ506759 RefSeq:NP_001003176.1 UniGene:Cfa.3665
ProteinModelPortal:Q9TVB8 STRING:Q9TVB8 GeneID:403803
KEGG:cfa:403803 InParanoid:Q9TVB8 NextBio:20817300 Uniprot:Q9TVB8
Length = 533
Score = 452 (164.2 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 90/247 (36%), Positives = 149/247 (60%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQLNDV-ADH-----RVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ + AD + ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SIAYNIVKIPPLQADKEDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LLKFLSS 267
Score = 193 (73.0 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 44/118 (37%), Positives = 69/118 (58%)
Query: 353 ETPRMNGQHQG-RPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q G +PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKSGGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 41 (19.5 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 193 LEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPR 232
++K D +++ L T+ T ET L + +GPR
Sbjct: 374 IDKADTGKNLVTLPNTTATATLRSDETIWLEPEVLFSGPR 413
>UNIPROTKB|Q16518 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9606 "Homo
sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0004744 "retinal isomerase activity" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0042574 "retinal metabolic
process" evidence=IEA] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0031090 "organelle membrane" evidence=IEA]
[GO:0006776 "vitamin A metabolic process" evidence=TAS]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 EMBL:CH471059
GO:GO:0007601 Orphanet:791 GO:GO:0050896 GO:GO:0016853 Orphanet:65
GO:GO:0006776 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 Orphanet:180 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:U18991
EMBL:U20510 EMBL:U20476 EMBL:U20477 EMBL:U20478 EMBL:U20479
EMBL:U20481 EMBL:U20482 EMBL:U20484 EMBL:U20485 EMBL:U20486
EMBL:AF039868 EMBL:AF039855 EMBL:AF039856 EMBL:AF039857
EMBL:AF039858 EMBL:AF039859 EMBL:AF039860 EMBL:AF039861
EMBL:AF039862 EMBL:AF039863 EMBL:AF039864 EMBL:AF039865
EMBL:AF039866 EMBL:AF039867 EMBL:AL139413 EMBL:BC075035
EMBL:BC075036 IPI:IPI00029250 RefSeq:NP_000320.1 UniGene:Hs.2133
ProteinModelPortal:Q16518 SMR:Q16518 STRING:Q16518
PhosphoSite:Q16518 DMDM:44888872 PRIDE:Q16518
Ensembl:ENST00000262340 GeneID:6121 KEGG:hsa:6121 UCSC:uc001dei.1
GeneCards:GC01M068894 HGNC:HGNC:10294 MIM:180069 MIM:204100
MIM:613794 neXtProt:NX_Q16518 PharmGKB:PA34655 InParanoid:Q16518
OMA:WLHVADK PhylomeDB:Q16518 BioCyc:MetaCyc:ENSG00000116745-MONOMER
ChiTaRS:RPE65 GenomeRNAi:6121 NextBio:23773 ArrayExpress:Q16518
Bgee:Q16518 CleanEx:HS_RPE65 Genevestigator:Q16518
GermOnline:ENSG00000116745 Uniprot:Q16518
Length = 533
Score = 452 (164.2 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 90/247 (36%), Positives = 149/247 (60%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +I+P TL+T++++DL V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQLNDV-ADH-----RVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ + AD + ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 193 (73.0 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 44/118 (37%), Positives = 70/118 (59%)
Query: 353 ETPRMNGQ-HQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q + G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKYCGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 38 (18.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 193 LEKMDLARD-VTILHQTSHPLTTSDGETFNLGVTLRPTGPR 232
++K D ++ VT+ + T+ + SD ET L + +GPR
Sbjct: 374 IDKADTGKNLVTLPNTTATAILCSD-ETIWLEPEVLFSGPR 413
>UNIPROTKB|Q28175 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9913 "Bos
taurus" [GO:0031090 "organelle membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0052885 "all-trans-retinyl-ester hydrolase,
11-cis retinol forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 EMBL:L11356 EMBL:X66277 IPI:IPI00711777 PIR:A47143
RefSeq:NP_776878.1 UniGene:Bt.108 PDB:3FSN PDB:3KVC PDB:4F2Z
PDB:4F30 PDB:4F3A PDB:4F3D PDBsum:3FSN PDBsum:3KVC PDBsum:4F2Z
PDBsum:4F30 PDBsum:4F3A PDBsum:4F3D ProteinModelPortal:Q28175
DIP:DIP-48993N STRING:Q28175 PRIDE:Q28175
Ensembl:ENSBTAT00000043702 GeneID:282043 KEGG:bta:282043 CTD:6121
InParanoid:Q28175 KO:K11158 BRENDA:5.2.1.7 EvolutionaryTrace:Q28175
NextBio:20805904 Uniprot:Q28175
Length = 533
Score = 450 (163.5 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 88/247 (35%), Positives = 149/247 (60%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 170
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVG 140
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPT 229
+ YA ++N++ +++P TL+T++++DL V++ T+HP +DG +N+G +
Sbjct: 141 EDYYACTETNFITKVNPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNF 200
Query: 230 GPRYCILQLNDV-ADH-----RVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
Y I+++ + AD + ++V P +F P Y+H+F +TP+Y + VE P+ I+
Sbjct: 201 SIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKIN 260
Query: 284 VPRLIKN 290
+ + + +
Sbjct: 261 LFKFLSS 267
Score = 194 (73.4 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 44/118 (37%), Positives = 70/118 (59%)
Query: 353 ETPRMNGQ-HQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N Q + G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKYGGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 193 LEKMDLARD-VTILHQTSHPLTTSDGETFNLGVTLRPTGPR 232
++K D ++ VT+ + T+ + SD ET L + +GPR
Sbjct: 374 IDKADTGKNLVTLPNTTATAILCSD-ETIWLEPEVLFSGPR 413
>ZFIN|ZDB-GENE-050410-16 [details] [associations]
symbol:rpe65b "retinal pigment epithelium-specific
protein 65b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
ZFIN:ZDB-GENE-050410-16 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0016787 GeneTree:ENSGT00500000044783 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AY646887
EMBL:CR759968 EMBL:BC133985 EMBL:BC155753 IPI:IPI00851384
RefSeq:NP_001082902.2 UniGene:Dr.79444 ProteinModelPortal:A9C3R9
PRIDE:A9C3R9 DNASU:100002865 Ensembl:ENSDART00000076542
GeneID:100002865 KEGG:dre:100002865 CTD:100002865
BioCyc:MetaCyc:MONOMER-16789 NextBio:20785619 Bgee:A9C3R9
Uniprot:A9C3R9
Length = 532
Score = 462 (167.7 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 88/266 (33%), Positives = 157/266 (59%)
Query: 47 FRDCHTEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISS 106
F C E+ +P+ V G IP+W+ G L+R GPG + +G+E F+HLFD L+H+F +
Sbjct: 16 FESCE-ELAEPIPAHVSGKIPAWLSGSLLRMGPGLFEIGDEPFNHLFDGQALIHKFDLKD 74
Query: 107 GLVTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG--SDNTLV 164
G VTY KFI++++Y++ +R+V+T GT PDPC +IF R T F+ +DN V
Sbjct: 75 GRVTYHRKFIRTDAYVRAMTEKRVVITELGTAAYPDPCKNIFSRFFTYFQGTEVTDNCSV 134
Query: 165 SVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGV 224
++YPI + YA ++N++ +++P TL+T++K+DL +++ T+HP +DG +N+G
Sbjct: 135 NIYPIGEDFYACTETNFITKVNPDTLETIKKVDLCNYLSVNGLTAHPHIEADGTVYNIGN 194
Query: 225 TL-RPTGPRYCILQLNDVADHRV------KLVTSVPVRWKFHPGYMHTFAMTPHYFIIVE 277
+ Y I+++ + + + K++ P +F P Y+H+F MT ++F+ VE
Sbjct: 195 CFGKNMSLAYNIVKIPPLQEEKSDPLAMSKVLVQFPSSERFKPSYVHSFGMTENHFVFVE 254
Query: 278 QPLSISVPRLIKN-SVTNRPLATCLK 302
P+ I++ + + + S+ C +
Sbjct: 255 TPVKINLLKFLTSWSIRGSNYMDCFE 280
Score = 181 (68.8 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 42/120 (35%), Positives = 67/120 (55%)
Query: 353 ETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N + G+ YT+ Y + ++ P + K+NV++ W + D YPSEP+FV
Sbjct: 417 EFPQINYSKFNGKDYTFAYGLG--LNHFVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQ 474
Query: 412 TPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 470
+P+A ED+GVLLS+++ R + LL+L A + E+ R +P LHG Y P
Sbjct: 475 SPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAE--VDVLIPLTLHGIYKP 532
>UNIPROTKB|E2RS36 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121
EMBL:AAEX03003490 Ensembl:ENSCAFT00000022164 NextBio:20854619
Uniprot:E2RS36
Length = 575
Score = 444 (161.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 87/265 (32%), Positives = 154/265 (58%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E+ Q V V G P W+ G L+R GPG + G++ + H FD LLH+F++ G VTY+
Sbjct: 63 EMPQMVSAQVRGQFPEWLSGYLLRIGPGKFEFGKDEYSHWFDGMALLHQFRMEKGTVTYR 122
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-SDNTLVSVYPIQ 170
KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+ P +DNT V+ +
Sbjct: 123 SKFLQSDTYKANSAHDRIVISEFGTLALPDPCKNVFERFMSKFELPAITDNTNVNYVQYK 182
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG 230
Y ++N+M+++D TL+ EK+D ++ + + T+HP DG +N+G + P G
Sbjct: 183 GDYYVSTETNFMNKVDIKTLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSYGPHG 242
Query: 231 PRYCILQLN----DVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISV 284
Y ++Q+ D+ + H +++ S+ + P Y H+F MT +Y I +EQPL +++
Sbjct: 243 SCYNVIQIPPEKVDLGETVHGAQVICSIASAERMKPSYYHSFGMTRNYIIFIEQPLKMNL 302
Query: 285 PRLIKNSVTNRPLATCLKFFEKQSN 309
+++ + + + + + + E Q N
Sbjct: 303 WKIVTSRIRGKAFSDGISW-EPQYN 326
Score = 199 (75.1 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 49/120 (40%), Positives = 65/120 (54%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++N GQ G+ Y +FY R G +LIKV+V N T W + YPSEPV
Sbjct: 458 GVEFPQINYGQFSGKKYRFFYGCGF---RHLVGDSLIKVDVVNKTLTIWREDGFYPSEPV 514
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV P +ED GV+LSV++ LLVL+A+ +ELGR P +P HG +
Sbjct: 515 FVPAPGTREEDGGVILSVVITPDQNENNFLLVLDAKNFEELGRAE--VPVRMPYGFHGTF 572
>MGI|MGI:1926923 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase"
species:10090 "Mus musculus" [GO:0001523 "retinoid metabolic
process" evidence=ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=ISO;ISS;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO;ISS;IDA] UniPathway:UPA00912 MGI:MGI:1926923
GO:GO:0046872 GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630
eggNOG:COG3670 GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AJ278064 EMBL:AF271298 EMBL:AF294899 EMBL:AY114302
EMBL:AY114294 EMBL:AY114295 EMBL:AY114296 EMBL:AY114297
EMBL:AY114298 EMBL:AY114299 EMBL:AY114300 EMBL:AY114301
EMBL:AK054171 IPI:IPI00122199 RefSeq:NP_067461.2 UniGene:Mm.174133
ProteinModelPortal:Q9JJS6 SMR:Q9JJS6 STRING:Q9JJS6
PhosphoSite:Q9JJS6 PRIDE:Q9JJS6 Ensembl:ENSMUST00000034308
GeneID:63857 KEGG:mmu:63857 InParanoid:Q9JJS6 BRENDA:1.14.99.36
NextBio:319783 Bgee:Q9JJS6 CleanEx:MM_BCMO1 Genevestigator:Q9JJS6
GermOnline:ENSMUSG00000031845 Uniprot:Q9JJS6
Length = 566
Score = 440 (159.9 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 97/272 (35%), Positives = 149/272 (54%)
Query: 56 QPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 115
+PVQ V G IP+W+ G L+RNGPG VGE ++H FD LLH F I G V Y+ K+
Sbjct: 14 EPVQAKVTGSIPAWLQGTLLRNGPGMHTVGESKYNHWFDGLALLHSFSIRDGEVFYRSKY 73
Query: 116 IKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLVSVYPIQD 171
++S++YI N A RIVV+ FGT PDPC +IF + + P +DN L+++ +
Sbjct: 74 LQSDTYIANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMKCGE 133
Query: 172 QVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG- 230
YA ++NY+ +IDP TL+TLEK+D + V + TSHP G N+G ++ G
Sbjct: 134 DFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSVVDKGR 193
Query: 231 PRYCILQLN-DVADHRVK---------LVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
+Y I ++ V D + K + S+ R P Y H+F +T +Y + +EQP
Sbjct: 194 TKYVIFKIPATVPDSKKKGKSPVKHAEVFCSISSRSLLSPSYYHSFGVTENYVVFLEQPF 253
Query: 281 SISVPRLIKNSVTNRPLATCLKFF-EKQSNIH 311
+ + ++ + A+C+ F E ++ IH
Sbjct: 254 KLDILKMATAYMRGVSWASCMSFDREDKTYIH 285
Score = 200 (75.5 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 60/189 (31%), Positives = 99/189 (52%)
Query: 297 LATCLKFFEKQSNIHSTP---RYA---QMFRARPLRFRLDLASPRTAPT-----GKV--R 343
LA K FE++S + S P R+A + + + L S TA G V +
Sbjct: 337 LANLNKDFEEKSRLTSVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDGHVYCQ 396
Query: 344 PSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDN-PGTLIKVNVQNNTCKSWSQKDV 402
P V+ + G E PR+N + G+PY Y +A A++ P ++K ++ + WS++
Sbjct: 397 PEVLYE-GLELPRINYAYNGKPYRYIFA--AEVQWSPVPTKILKYDILTKSSLKWSEESC 453
Query: 403 YPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVP 461
+P+EP+FV TP A ED+GV+LS ++ S P ++ LL+L+A++ EL R + +
Sbjct: 454 WPAEPLFVPTPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELARASVDADMHLD 512
Query: 462 KCLHGWYFP 470
LHG + P
Sbjct: 513 --LHGLFIP 519
>UNIPROTKB|Q8HXG8 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9541 "Macaca fascicularis" [GO:0016119 "carotene metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] GO:GO:0005739
GO:GO:0046872 GO:GO:0016702 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AB097557
ProteinModelPortal:Q8HXG8 GO:GO:0016119 Uniprot:Q8HXG8
Length = 556
Score = 425 (154.7 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 86/269 (31%), Positives = 155/269 (57%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY+
Sbjct: 40 EAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYR 99
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVSV 166
KF++S++Y N A RIV++ FGT PDPC ++F+R + F+ PG +DNT V+
Sbjct: 100 SKFLQSDTYKANSAKNRIVMSEFGTLATPDPCKNVFERFMSRFELPGKAAAMTDNTNVNY 159
Query: 167 YPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL 226
+ Y ++N+M+++D TL+ EK+D ++ + + T+HP DG +N+G +
Sbjct: 160 VRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSF 219
Query: 227 RPTGPRYCILQLN----DVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
P G Y ++++ D+ + H +++ S+ K P Y H+F MT +Y I +EQPL
Sbjct: 220 GPFGFSYKVIRVPPEKVDLEETTHGAQVICSIAPTEKGKPSYYHSFGMTRNYIIFIEQPL 279
Query: 281 SISVPRLIKNSVTNRPLATCLKFFEKQSN 309
+++ ++ + + + + + + E Q N
Sbjct: 280 KMNLWKIATSKIRGKAFSDGISW-EPQCN 307
Score = 206 (77.6 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 50/122 (40%), Positives = 67/122 (54%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++ GQ G+ Y +FY R G +LIKV+V N T K W + YPSEPV
Sbjct: 439 GIEFPQIYYGQFSGKKYRFFYGCGF---RHLVGDSLIKVDVVNKTLKVWREDGFYPSEPV 495
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV P +ED GV+LSV++ + LLVL+A+ +ELGR P +P HG +
Sbjct: 496 FVPVPGTNEEDGGVILSVVITPNQNESNFLLVLDAKNFEELGRAE--VPVQMPYGFHGTF 553
Query: 469 FP 470
P
Sbjct: 554 IP 555
>UNIPROTKB|Q9BYV7 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016119 "carotene metabolic process"
evidence=IDA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IDA] [GO:0042573 "retinoic acid
metabolic process" evidence=NAS] [GO:0042574 "retinal metabolic
process" evidence=NAS] [GO:0005622 "intracellular" evidence=IC]
[GO:0055114 "oxidation-reduction process" evidence=IDA] [GO:0016121
"carotene catabolic process" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISS;TAS] [GO:0016116 "carotenoid metabolic
process" evidence=ISS] [GO:0051881 "regulation of mitochondrial
membrane potential" evidence=ISS] [GO:2000377 "regulation of
reactive oxygen species metabolic process" evidence=ISS]
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AF276432 EMBL:AK027801 EMBL:EF444956
EMBL:AP002884 EMBL:AJ290393 IPI:IPI00472555 IPI:IPI00479961
IPI:IPI00978312 RefSeq:NP_001032367.2 RefSeq:NP_001243326.1
UniGene:Hs.728325 ProteinModelPortal:Q9BYV7 SMR:Q9BYV7
STRING:Q9BYV7 PhosphoSite:Q9BYV7 DMDM:308153680 PaxDb:Q9BYV7
PRIDE:Q9BYV7 Ensembl:ENST00000357685 Ensembl:ENST00000393032
Ensembl:ENST00000438022 Ensembl:ENST00000526088
Ensembl:ENST00000531169 GeneID:83875 KEGG:hsa:83875 UCSC:uc001pne.1
UCSC:uc009yyn.3 CTD:83875 GeneCards:GC11P112046 HGNC:HGNC:18503
HPA:HPA039825 HPA:HPA040695 MIM:611740 neXtProt:NX_Q9BYV7
PharmGKB:PA162377424 InParanoid:Q9BYV7 KO:K10252 OMA:VSLNAPE
OrthoDB:EOG45B1FD BioCyc:MetaCyc:G66-33846-MONOMER ChiTaRS:BCO2
GenomeRNAi:83875 NextBio:72911 ArrayExpress:Q9BYV7 Bgee:Q9BYV7
CleanEx:HS_BCO2 Genevestigator:Q9BYV7 GermOnline:ENSG00000197580
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 Uniprot:Q9BYV7
Length = 579
Score = 432 (157.1 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 87/269 (32%), Positives = 157/269 (58%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY+
Sbjct: 63 EAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYR 122
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVSV 166
KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+ PG +DNT V+
Sbjct: 123 SKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNY 182
Query: 167 YPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL 226
+ Y ++N+M+++D TL+ EK+D ++ + + T+HP DG +N+G +
Sbjct: 183 VRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGNSF 242
Query: 227 RPTGPRYCILQLN----DVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
P G Y ++++ D+ + H V+++ S+ K P Y H+F MT +Y I +EQPL
Sbjct: 243 GPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPL 302
Query: 281 SISVPRLIKNSVTNRPLATCLKFFEKQSN 309
+++ ++ + + + + + + E Q N
Sbjct: 303 KMNLWKIATSKIRGKAFSDGISW-EPQCN 330
Score = 192 (72.6 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 47/122 (38%), Positives = 66/122 (54%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++ + G+ Y +FY R G +LIKV+V N T K W + YPSEPV
Sbjct: 462 GIEFPQIYYDRFSGKKYHFFYGCGF---RHLVGDSLIKVDVVNKTLKVWREDGFYPSEPV 518
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV P +ED GV+LSV++ + +LVL+A+ +ELGR P +P HG +
Sbjct: 519 FVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAE--VPVQMPYGFHGTF 576
Query: 469 FP 470
P
Sbjct: 577 IP 578
>UNIPROTKB|Q9HAY6 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9606 "Homo sapiens" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0001523
"retinoid metabolic process" evidence=IDA;TAS] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0008202 "steroid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0035238 "vitamin A biosynthetic process"
evidence=NAS] [GO:0042574 "retinal metabolic process" evidence=NAS]
Reactome:REACT_111217 UniPathway:UPA00912 GO:GO:0005829
GO:GO:0008202 GO:GO:0046872 GO:GO:0004497 EMBL:CH471114
GO:GO:0042572 GO:GO:0042574 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AF294900 EMBL:AK001592
EMBL:BC126210 EMBL:BC126212 IPI:IPI00307216 RefSeq:NP_059125.2
UniGene:Hs.212172 ProteinModelPortal:Q9HAY6 SMR:Q9HAY6
IntAct:Q9HAY6 STRING:Q9HAY6 PhosphoSite:Q9HAY6 DMDM:41688803
PRIDE:Q9HAY6 DNASU:53630 Ensembl:ENST00000258168 GeneID:53630
KEGG:hsa:53630 UCSC:uc002fgn.1 GeneCards:GC16P081272
HGNC:HGNC:13815 HPA:HPA043811 MIM:115300 MIM:605748
neXtProt:NX_Q9HAY6 Orphanet:199285 PharmGKB:PA37812
InParanoid:Q9HAY6 PhylomeDB:Q9HAY6 BioCyc:MetaCyc:HS06050-MONOMER
ChiTaRS:BCMO1 GenomeRNAi:53630 NextBio:56108 ArrayExpress:Q9HAY6
Bgee:Q9HAY6 CleanEx:HS_BCMO1 Genevestigator:Q9HAY6
GermOnline:ENSG00000135697 GO:GO:0035238 Uniprot:Q9HAY6
Length = 547
Score = 436 (158.5 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 95/272 (34%), Positives = 147/272 (54%)
Query: 56 QPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 115
+PV+ V G IP+W+ G L+RNGPG VGE ++H FD LLH F I G V Y+ K+
Sbjct: 14 EPVRAKVTGKIPAWLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFTIRDGEVYYRSKY 73
Query: 116 IKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLVSVYPIQD 171
++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+++ +
Sbjct: 74 LRSDTYNTNIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMKCGE 133
Query: 172 QVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGP 231
YA ++NY+ +I+P TL+TLEK+D + V + TSHP G N+G ++ G
Sbjct: 134 DFYATSETNYIRKINPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIVEKGK 193
Query: 232 -RYCILQLNDVADHRVK----------LVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
+Y I ++ K + S+P R P Y H+F +T +Y I +EQP
Sbjct: 194 TKYVIFKIPATVPEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPF 253
Query: 281 SISVPRLIKNSVTNRPLATCLKFF-EKQSNIH 311
+ + ++ + A+CL F E+++ IH
Sbjct: 254 RLDILKMATAYIRRMSWASCLAFHREEKTYIH 285
Score = 177 (67.4 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 40/119 (33%), Positives = 64/119 (53%)
Query: 351 GCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFV 410
G E PR+N H G+ Y Y +A P +IK ++ + W + D +P+EP+FV
Sbjct: 403 GLELPRVNYAHNGKQYRYVFATGVQWS-PIPTKIIKYDILTKSSLKWREDDCWPAEPLFV 461
Query: 411 ATPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P A ED+GV+LS ++ S P ++ LL+L+A++ EL R + + LHG +
Sbjct: 462 PAPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELARASVDVDMHMD--LHGLF 517
>ZFIN|ZDB-GENE-010508-1 [details] [associations]
symbol:bcmo1a "beta-carotene 15,15'-monooxygenase 1a"
species:7955 "Danio rerio" [GO:0008198 "ferrous iron binding"
evidence=NAS] [GO:0003834 "beta-carotene 15,15'-monooxygenase
activity" evidence=IDA] [GO:0030902 "hindbrain development"
evidence=IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0004497 "monooxygenase
activity" evidence=IEA] [GO:0001754 "eye photoreceptor cell
differentiation" evidence=IMP] ZFIN:ZDB-GENE-010508-1 GO:GO:0008198
GO:GO:0030902 HOVERGEN:HBG050679 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 BRENDA:1.14.99.36 GO:GO:0001754
EMBL:AJ290390 IPI:IPI00483690 UniGene:Dr.12383 STRING:Q90WH4
ArrayExpress:Q90WH4 Uniprot:Q90WH4
Length = 516
Score = 434 (157.8 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 93/276 (33%), Positives = 152/276 (55%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E +P++ V+G IP W+ G LIRNGPG ++VGE +++H FD LLH F I+ G VTY+
Sbjct: 11 EHPEPIKTEVKGSIPEWVQGTLIRNGPGMFSVGETTYNHWFDGMALLHSFAINKGEVTYR 70
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLVSVYP 168
++++ ++Y N A RIVV+ GT PDPC +IF ++ T P +DN ++
Sbjct: 71 SRYLRGDTYNSNMQANRIVVSEMGTMAYPDPCKNIFSKVITFLSHTIPDFTDNCGNNIIK 130
Query: 169 IQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRP 228
+ +A ++NY+ +IDP TL+T EK+D + + + SH +G ++++G +
Sbjct: 131 YGNDFHATSETNYIRKIDPVTLETQEKIDYLKYLPVSIVASHTHYDKEGNSYSMGTCIAE 190
Query: 229 TGP-RYCILQL--NDVADHRVKL-----VTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
G +Y + ++ D L V ++P R P Y H+F MT +YFI +EQPL
Sbjct: 191 KGKTKYMLFKVPGGSRPDGSPPLKSAEAVCTLPCRSLLTPSYYHSFGMTDNYFIFIEQPL 250
Query: 281 SISVPRLIKNSVTNRPLATCLKFFEKQSN-IHSTPR 315
+ + ++ + A+C+KF + S IH R
Sbjct: 251 KLDILKMATAYLRRVSWASCMKFHPEDSTLIHLIDR 286
Score = 176 (67.0 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 46/151 (30%), Positives = 79/151 (52%)
Query: 325 LRFRLDLASPRTAPTGKV--RPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNP- 381
++ + AS GK+ + V+C+ G E PR+N G+ Y Y Y D ++P
Sbjct: 370 VKLKYTTASAVKEKDGKIMCQGEVLCE-GVELPRINYNFNGKKYRYSYMCCVD---ESPV 425
Query: 382 GT-LIKVNVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVS-LL 439
T ++K + W D + SEPVF+ P AV ED+GV+L+V++ ++ P + LL
Sbjct: 426 ATRIVKFDADTKQQIEWKGDDGFASEPVFIPRPGAVDEDDGVVLTVII-NNKPLQGGFLL 484
Query: 440 VLNARTMQELGRVNFTTPTPVPKCLHGWYFP 470
VL+A++ +E+ R + +HG++ P
Sbjct: 485 VLDAKSFKEIARA--CLDVEIHMDMHGYFIP 513
>UNIPROTKB|F1N2Z9 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 EMBL:DAAA02040291
EMBL:DAAA02040290 IPI:IPI00729522 Ensembl:ENSBTAT00000048395
OMA:ICSIASE Uniprot:F1N2Z9
Length = 530
Score = 437 (158.9 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 88/265 (33%), Positives = 152/265 (57%)
Query: 53 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
E Q + V+G P W+ G L+R GPG + G++ ++H FD LLH+FK+ G VTY+
Sbjct: 41 ETPQVISAGVQGHFPEWLSGYLLRVGPGKFEFGKDKYNHWFDGMALLHQFKVEKGTVTYR 100
Query: 113 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLF-KPG-SDNTLVSVYPIQ 170
KF++S++Y N RIV++ FGT +PDPC ++F+R + F KP +DNT V+ +
Sbjct: 101 SKFLQSDTYKANSDRDRIVISEFGTLALPDPCKNVFERFMSKFEKPAITDNTNVNYVLYK 160
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG 230
Y ++N+M+++D TL+ EK++ + + + T+HP DG T+N+G + G
Sbjct: 161 GDYYLSTETNFMNKVDIETLEKTEKVNWTKFIAVNGATAHPHYDPDGTTYNMGNSYGKHG 220
Query: 231 PRYCILQL----NDVAD--HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISV 284
Y ++++ +D + H +++ S+ P Y H+F MT +Y I +EQPL I++
Sbjct: 221 SCYNVIRVPPEKSDPGETIHGAQVICSIASEEGMRPSYYHSFGMTRNYIIFIEQPLKINL 280
Query: 285 PRLIKNSVTNRPLATCLKFFEKQSN 309
R+I + + + + + + E Q N
Sbjct: 281 WRIISSKIRGKAFSDGISW-EPQYN 304
Score = 163 (62.4 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 37/78 (47%), Positives = 49/78 (62%)
Query: 353 ETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPVFV 410
E P++N GQ G+ Y +FY R G +LIKV+V N T + W + YPSEPVFV
Sbjct: 438 EFPQINYGQFNGKKYQFFYGCGF---RHLVGDSLIKVDVVNKTRRVWREDGFYPSEPVFV 494
Query: 411 ATPNAVKEDEGVLLSVLL 428
P A KED+GV+LSV++
Sbjct: 495 PVPGASKEDDGVILSVVI 512
>UNIPROTKB|F1N3B7 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
OMA:ITENYIV GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:DAAA02046109 EMBL:DAAA02046110 IPI:IPI00702818
Ensembl:ENSBTAT00000048748 Uniprot:F1N3B7
Length = 494
Score = 425 (154.7 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 96/291 (32%), Positives = 156/291 (53%)
Query: 56 QPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 115
+PV+ V G IP+W+ G+L+RNGPG VGE ++H FD LLH F I G V Y+ K+
Sbjct: 14 EPVRARVTGKIPAWLQGILLRNGPGMHTVGETRYNHWFDGLALLHSFTIRDGEVYYRSKY 73
Query: 116 IKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLVSVYPIQD 171
++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+++ +
Sbjct: 74 LRSDTYTANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMRCGE 133
Query: 172 QVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGP 231
YA +++Y+ RI+P TL+TLEK+D + V + TSHP + G N+G ++ G
Sbjct: 134 DFYATTETSYIRRINPQTLETLEKVDFRKYVAVNLATSHPHYDAAGNVLNVGTSIVDKGK 193
Query: 232 -RYCILQLN-DVADHR---------VKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
+Y I ++ V R ++ S+ P Y H+F ++ +Y I +EQP
Sbjct: 194 TKYVIFKIPAPVPGGRKEGRSPLKDTEVFCSIAAHSLLSPSYYHSFGVSENYIIFLEQPF 253
Query: 281 SISVPRLIKNSVTNRPLATCLKFF-EKQSNIHSTPRYAQMFRARPLRFRLD 330
+ + ++ + A+CL F E +++IH R + + P ++ D
Sbjct: 254 KLDILKMATAYIRGVSWASCLAFHGEDKTHIHIIDRRTR--KPVPTKYHTD 302
Score = 153 (58.9 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 33/101 (32%), Positives = 54/101 (53%)
Query: 343 RPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDV 402
+P ++C+ G E P +N H G+PY Y +A P V + +W ++
Sbjct: 396 QPELLCE-GLELPHINYAHNGQPYRYIFAAGVQWS-PIPKLFYSSIVAQWSSLTWREEHC 453
Query: 403 YPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNA 443
+P+EP+FV TP A ED+G++LS ++ + LLVL+A
Sbjct: 454 WPAEPLFVPTPGAKDEDDGIILSAIVSTDPQKSPFLLVLDA 494
>WB|WBGene00018755 [details] [associations]
symbol:bcmo-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:FO080905
RefSeq:NP_494694.2 ProteinModelPortal:Q9TXT9 PaxDb:Q9TXT9
EnsemblMetazoa:F53C3.12 GeneID:173733 KEGG:cel:CELE_F53C3.12
CTD:173733 WormBase:F53C3.12 HOGENOM:HOG000153586 InParanoid:Q9TXT9
OMA:MEAQRIV NextBio:880851 Uniprot:Q9TXT9
Length = 530
Score = 399 (145.5 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 84/261 (32%), Positives = 138/261 (52%)
Query: 54 VDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQC 113
V +P + G +PS++ G ++RNGPG + +G+ + H FD G + R+ G + Y
Sbjct: 16 VIEPKLCSTSGSVPSYLKGTMLRNGPGMFEIGDTKYQHWFDGMGFIQRYHFEDGKMYYSA 75
Query: 114 KFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS---DNTLVSVYPIQ 170
++++SE+Y KN A+RIV FGT PDPC SIF R + F DN V+ P+
Sbjct: 76 RYLESENYKKNMEAQRIVTGSFGTASFPDPCKSIFSRFFSSFVQSEGIHDNANVAFAPVG 135
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG 230
D +YA ++ MHR+D +LDTLE +D ++ V + T+H L +G+ +N+G P
Sbjct: 136 DGLYACTETPNMHRVDLDSLDTLEPVDFSKYVALHTCTAHQLFDENGDVYNIGSRFGPDA 195
Query: 231 PR-YCILQ----LNDVADHRVKLVTSV-PVRWK--FHPGYMHTFAMTPHYFIIVEQPLSI 282
+ + + L +D + T + +R F+P YMH+F M+ +Y I+ E P+ I
Sbjct: 196 AHVFTVTKNPKNLQSDSDRSWEHTTKIGEIRCSETFYPTYMHSFGMSENYLIMFESPIRI 255
Query: 283 SVPRLIKNSVTNRPLATCLKF 303
+ + I C+K+
Sbjct: 256 DIKKFIMKRFITTTFRDCMKW 276
Score = 160 (61.4 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 41/138 (29%), Positives = 70/138 (50%)
Query: 340 GKVR--PSVICDVGCETPRMNGQHQG-RPYTYFYAIS---ADIDRDNPGTLIKVNVQNNT 393
GK+R +CD+ E PR + + +PY Y Y S A PG ++K +++N
Sbjct: 392 GKIRLKEKRVCDISMEFPRYHWEKINMKPYNYVYGSSVLGAQKSETLPG-IVKADLENGD 450
Query: 394 CKSWSQKDVYP--SEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGR 451
K W +++ EP+FV P V+ED+G+L+ ++ R +L+L A+ + E+ R
Sbjct: 451 HKVWRRENDKQICGEPIFVPNPEGVREDDGILIVPVMTISDGQRPFVLILEAKNLTEIAR 510
Query: 452 VNFTTPTP-VPKCLHGWY 468
+T P +P H +Y
Sbjct: 511 --YTIPEARIPLGFHAFY 526
>UNIPROTKB|E9PJJ1 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IEA] InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AP002884 HGNC:HGNC:18503 ChiTaRS:BCO2 IPI:IPI00985076
ProteinModelPortal:E9PJJ1 SMR:E9PJJ1 Ensembl:ENST00000532593
ArrayExpress:E9PJJ1 Bgee:E9PJJ1 Uniprot:E9PJJ1
Length = 474
Score = 344 (126.2 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 72/224 (32%), Positives = 132/224 (58%)
Query: 98 LLHRFKISSGLVTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK- 156
LLH+F+++ G VTY+ KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+
Sbjct: 3 LLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFEL 62
Query: 157 PG-----SDNTLVSVYPIQDQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHP 211
PG +DNT V+ + Y ++N+M+++D TL+ EK+D ++ + + T+HP
Sbjct: 63 PGKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHP 122
Query: 212 LTTSDGETFNLGVTLRPTGPRYCILQLN----DVAD--HRVKLVTSVPVRWKFHPGYMHT 265
DG +N+G + P G Y ++++ D+ + H V+++ S+ K P Y H+
Sbjct: 123 HYDLDGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHS 182
Query: 266 FAMTPHYFIIVEQPLSISVPRLIKNSVTNRPLATCLKFFEKQSN 309
F MT +Y I +EQPL +++ ++ + + + + + + E Q N
Sbjct: 183 FGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISW-EPQCN 225
Score = 192 (72.6 bits), Expect = 2.7e-49, Sum P(2) = 2.7e-49
Identities = 47/122 (38%), Positives = 66/122 (54%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++ + G+ Y +FY R G +LIKV+V N T K W + YPSEPV
Sbjct: 357 GIEFPQIYYDRFSGKKYHFFYGCGF---RHLVGDSLIKVDVVNKTLKVWREDGFYPSEPV 413
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
FV P +ED GV+LSV++ + +LVL+A+ +ELGR P +P HG +
Sbjct: 414 FVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAE--VPVQMPYGFHGTF 471
Query: 469 FP 470
P
Sbjct: 472 IP 473
>WB|WBGene00012914 [details] [associations]
symbol:bcmo-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AL110485
OMA:TSMEFPR HOGENOM:HOG000153586 RefSeq:NP_496729.2
UniGene:Cel.14051 ProteinModelPortal:Q9U2E4 SMR:Q9U2E4
DIP:DIP-26226N IntAct:Q9U2E4 MINT:MINT-1067701 PaxDb:Q9U2E4
EnsemblMetazoa:Y46G5A.24 GeneID:189959 KEGG:cel:CELE_Y46G5A.24
UCSC:Y46G5A.24 CTD:189959 WormBase:Y46G5A.24 InParanoid:Q9U2E4
NextBio:944184 Uniprot:Q9U2E4
Length = 529
Score = 372 (136.0 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 79/261 (30%), Positives = 134/261 (51%)
Query: 54 VDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQC 113
V +P + G +PS++ G ++RNGPG + VGEE + H FD G + R+ G + Y
Sbjct: 16 VPEPKECKKVGSVPSYLTGTMLRNGPGMFTVGEEEYKHWFDGLGFMQRYHFEDGKMFYSA 75
Query: 114 KFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS---DNTLVSVYPIQ 170
++++SE+Y K A+RIV FGT PDPC +IF + + F S DN+ V+ P+
Sbjct: 76 RYLESEAYTKTVEAQRIVAGTFGTLSFPDPCKTIFSKYFSEFMNHSEKHDNSNVAFTPVG 135
Query: 171 DQVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG 230
D +YA ++ +M+R+D TL TLE D ++ V + T+H L +G+ +N+G P
Sbjct: 136 DSLYACTETPHMYRVDLDTLKTLEAADFSKFVAVHSCTAHQLYDENGDVYNIGSRFGPES 195
Query: 231 PRYCILQLN-----DVADH---RVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSI 282
+ N DH + + +P YMH+F M+ +Y ++ E P+ +
Sbjct: 196 AHVFTVTKNPKNQKSENDHSWEHTSKIGEIKASDPLYPTYMHSFGMSENYLVMFESPVRL 255
Query: 283 SVPRLIKNSVTNRPLATCLKF 303
+ + + + CL++
Sbjct: 256 HLQKYLLSEFVRATYHDCLEW 276
Score = 131 (51.2 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 33/130 (25%), Positives = 67/130 (51%)
Query: 347 ICDVGCETPRMNGQHQG-RPYTYFYA--ISADIDRDNPGTLIKVNVQNNTCKSWSQKDVY 403
+C+ E PR + + + Y Y + + ID + G ++K +++ W++++ +
Sbjct: 401 VCETSMEFPRYHWEKINMKEYRYVFGSTVFGRIDGNLAG-VVKADLKFGNHLIWNRENPH 459
Query: 404 P--SEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTP-V 460
EP+FV P ++ED+G+L+ ++ S +L+L+A+T++E R F P +
Sbjct: 460 QICGEPIFVPNPEGIEEDDGILIVPIMSSSEKQVPFVLILDAKTLEETAR--FEIPEARI 517
Query: 461 PKCLHGWYFP 470
P H +Y P
Sbjct: 518 PLGFHAFYKP 527
Score = 39 (18.8 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 427 LLWSHHPTRVSLLVLNARTMQEL 449
L W H VS+ +LN +T ++L
Sbjct: 274 LEW-HGDKDVSIFILNKKTGEQL 295
>UNIPROTKB|F1P321 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00584895 EMBL:AADN02012423
Ensembl:ENSGALT00000018373 Uniprot:F1P321
Length = 449
Score = 304 (112.1 bits), Expect = 6.0e-43, Sum P(2) = 6.0e-43
Identities = 60/183 (32%), Positives = 113/183 (61%)
Query: 117 KSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQDQVY 174
++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV+VYP+ + Y
Sbjct: 1 RTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVGEDYY 60
Query: 175 ALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPTGPRY 233
A ++N++ +I+P TL+T++++DL + V++ T+HP +DG +N+G + Y
Sbjct: 61 ACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLAY 120
Query: 234 CILQLNDV-AD-----HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRL 287
I+++ + AD ++ ++V P +F P Y+H+F +TP+Y + VE P+ I++ +
Sbjct: 121 NIIRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKF 180
Query: 288 IKN 290
+ +
Sbjct: 181 LSS 183
Score = 201 (75.8 bits), Expect = 6.0e-43, Sum P(2) = 6.0e-43
Identities = 44/118 (37%), Positives = 69/118 (58%)
Query: 353 ETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N ++ G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 333 EFPQINYKKYGGKPYTYTYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 390
Query: 412 TPNAVKEDEGVLLSVLLW-SHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LS+++ P LL+LNA+ M E+ R PV HG +
Sbjct: 391 HPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVNIPVT--FHGLF 446
Score = 40 (19.1 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 193 LEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRY 233
++K D +++ L T+ T ET L + +GPR+
Sbjct: 290 IDKADTGKNLVTLPYTTATATLRSDETVWLEPEVIFSGPRH 330
>UNIPROTKB|F1NE28 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:AADN02012423 IPI:IPI00821971
Ensembl:ENSGALT00000037886 Uniprot:F1NE28
Length = 458
Score = 304 (112.1 bits), Expect = 9.4e-43, Sum P(2) = 9.4e-43
Identities = 60/183 (32%), Positives = 113/183 (61%)
Query: 117 KSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQDQVY 174
++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV+VYP+ + Y
Sbjct: 10 RTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVGEDYY 69
Query: 175 ALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTL-RPTGPRY 233
A ++N++ +I+P TL+T++++DL + V++ T+HP +DG +N+G + Y
Sbjct: 70 ACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLAY 129
Query: 234 CILQLNDV-AD-----HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRL 287
I+++ + AD ++ ++V P +F P Y+H+F +TP+Y + VE P+ I++ +
Sbjct: 130 NIIRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKF 189
Query: 288 IKN 290
+ +
Sbjct: 190 LSS 192
Score = 201 (75.8 bits), Expect = 9.4e-43, Sum P(2) = 9.4e-43
Identities = 44/118 (37%), Positives = 69/118 (58%)
Query: 353 ETPRMN-GQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 411
E P++N ++ G+PYTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 342 EFPQINYKKYGGKPYTYTYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 399
Query: 412 TPNAVKEDEGVLLSVLLW-SHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 468
P+A++ED+GV+LS+++ P LL+LNA+ M E+ R PV HG +
Sbjct: 400 HPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVNIPVT--FHGLF 455
Score = 40 (19.1 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 193 LEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRY 233
++K D +++ L T+ T ET L + +GPR+
Sbjct: 299 IDKADTGKNLVTLPYTTATATLRSDETVWLEPEVIFSGPRH 339
>RGD|70981 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase 1" species:10116
"Rattus norvegicus" [GO:0001523 "retinoid metabolic process"
evidence=IEA;ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IEA;ISO;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0042572 "retinol
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 93/272 (34%), Positives = 148/272 (54%)
Query: 56 QPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 115
+P++ TV G IP+W+ G L+RNGPG VG+ ++H FD LLH F I G V Y+ K+
Sbjct: 14 EPLRATVTGSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSIRDGEVFYRSKY 73
Query: 116 IKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLVSVYPIQD 171
++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+++ +
Sbjct: 74 LQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMKCGE 133
Query: 172 QVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG- 230
YA ++NY+ +IDP TL+TLEK+D + V + TSHP G N+G ++ G
Sbjct: 134 DFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIADKGG 193
Query: 231 PRYCILQLNDVADHRVK----------LVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
+Y + ++ A K + S+P R P Y H+F +T +Y + +EQP
Sbjct: 194 TKYVMFKIPATAPGSKKKGKNPLKHSEVFCSIPSRSLLSPSYYHSFGVTENYVVFLEQPF 253
Query: 281 SISVPRLIKNSVTNRPLATCLKFF-EKQSNIH 311
+ + ++ + A+C+ F E ++ IH
Sbjct: 254 KLDILKMATAYMRGVSWASCMTFCKEDKTYIH 285
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 75/244 (30%), Positives = 117/244 (47%)
Query: 244 HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQP--LSISVPRLIKNSVTNR-PLATC 300
H + T PV KF+ M F H+ E+ + V NS+ LA
Sbjct: 285 HIIDQKTRKPVPTKFYTDPMVVF----HHVNAYEEDGCVLFDVIAYEDNSLYQLFYLANL 340
Query: 301 LKFFEKQSNIHSTP---RYA---QMFRARPLRFRLDLASPRTAPTGKVRPS-VIC--DV- 350
K FE++S + S P R+A + + + L S TA K + V C +V
Sbjct: 341 NKDFEEKSRLTSVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDDHVYCQPEVL 400
Query: 351 --GCETPRMNGQHQGRPYTYFYAISADIDRDN-PGTLIKVNVQNNTCKSWSQKDVYPSEP 407
G E PR+N H G+PY Y +A A++ P ++K +V + WS++ +P+EP
Sbjct: 401 YEGLELPRINYAHNGKPYRYIFA--AEVQWSPVPTKILKYDVLTKSSLKWSEESCWPAEP 458
Query: 408 VFVATPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHG 466
+FV TP A ED+GV+LS ++ S P ++ LL+L+A++ EL R + + LHG
Sbjct: 459 LFVPTPGAKDEDDGVILSAII-STDPQKLPFLLILDAKSFTELARASVDVDMHLD--LHG 515
Query: 467 WYFP 470
+ P
Sbjct: 516 LFIP 519
>UNIPROTKB|Q91XT5 [details] [associations]
symbol:Bcmo1 "Beta,beta-carotene 15,15'-monooxygenase"
species:10116 "Rattus norvegicus" [GO:0004497 "monooxygenase
activity" evidence=IEA] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 93/272 (34%), Positives = 148/272 (54%)
Query: 56 QPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 115
+P++ TV G IP+W+ G L+RNGPG VG+ ++H FD LLH F I G V Y+ K+
Sbjct: 14 EPLRATVTGSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSIRDGEVFYRSKY 73
Query: 116 IKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLVSVYPIQD 171
++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+++ +
Sbjct: 74 LQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMKCGE 133
Query: 172 QVYALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG- 230
YA ++NY+ +IDP TL+TLEK+D + V + TSHP G N+G ++ G
Sbjct: 134 DFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIADKGG 193
Query: 231 PRYCILQLNDVADHRVK----------LVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPL 280
+Y + ++ A K + S+P R P Y H+F +T +Y + +EQP
Sbjct: 194 TKYVMFKIPATAPGSKKKGKNPLKHSEVFCSIPSRSLLSPSYYHSFGVTENYVVFLEQPF 253
Query: 281 SISVPRLIKNSVTNRPLATCLKFF-EKQSNIH 311
+ + ++ + A+C+ F E ++ IH
Sbjct: 254 KLDILKMATAYMRGVSWASCMTFCKEDKTYIH 285
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 75/244 (30%), Positives = 117/244 (47%)
Query: 244 HRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQP--LSISVPRLIKNSVTNR-PLATC 300
H + T PV KF+ M F H+ E+ + V NS+ LA
Sbjct: 285 HIIDQKTRKPVPTKFYTDPMVVF----HHVNAYEEDGCVLFDVIAYEDNSLYQLFYLANL 340
Query: 301 LKFFEKQSNIHSTP---RYA---QMFRARPLRFRLDLASPRTAPTGKVRPS-VIC--DV- 350
K FE++S + S P R+A + + + L S TA K + V C +V
Sbjct: 341 NKDFEEKSRLTSVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDDHVYCQPEVL 400
Query: 351 --GCETPRMNGQHQGRPYTYFYAISADIDRDN-PGTLIKVNVQNNTCKSWSQKDVYPSEP 407
G E PR+N H G+PY Y +A A++ P ++K +V + WS++ +P+EP
Sbjct: 401 YEGLELPRINYAHNGKPYRYIFA--AEVQWSPVPTKILKYDVLTKSSLKWSEESCWPAEP 458
Query: 408 VFVATPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHG 466
+FV TP A ED+GV+LS ++ S P ++ LL+L+A++ EL R + + LHG
Sbjct: 459 LFVPTPGAKDEDDGVILSAII-STDPQKLPFLLILDAKSFTELARASVDVDMHLD--LHG 515
Query: 467 WYFP 470
+ P
Sbjct: 516 LFIP 519
>RGD|1309022 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=ISO] [GO:0016116
"carotenoid metabolic process" evidence=ISO] [GO:0016119 "carotene
metabolic process" evidence=ISO] [GO:0016121 "carotene catabolic
process" evidence=ISO] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISO] [GO:0051881
"regulation of mitochondrial membrane potential" evidence=ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=ISO] InterPro:IPR012606 Pfam:PF08069 RGD:1309022
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 IPI:IPI00382241
EMBL:AY325176 UniGene:Rn.162999 ProteinModelPortal:Q7TP70
PRIDE:Q7TP70 UCSC:RGD:1309022 Genevestigator:Q7TP70 Uniprot:Q7TP70
Length = 481
Score = 313 (115.2 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 59/140 (42%), Positives = 90/140 (64%)
Query: 58 VQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIK 117
V V G IP W++G L+R GPG + G++ ++H FD LLH+FK+ G VTY+ KF++
Sbjct: 100 VSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFKMEKGTVTYKSKFLQ 159
Query: 118 SESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS--DNTLVSVYPIQDQVYA 175
S++Y N A RIV++ FGT +PDPC SIF+R + F+P + DNT V+ + Y
Sbjct: 160 SDTYKANSAGDRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTSVNFVQYKGDYYM 219
Query: 176 LGDSNYMHRIDPATLDTLEK 195
++N+M+++D TL+ EK
Sbjct: 220 STETNFMNKVDIETLERTEK 239
Score = 161 (61.7 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 38/92 (41%), Positives = 55/92 (59%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++N G+ G+ Y++FY R G +LIKV+V N T + W ++ YPSEPV
Sbjct: 359 GIEFPQINYGRFSGKKYSFFYGCGF---RHLVGDSLIKVDVVNKTLRVWREEGCYPSEPV 415
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLV 440
FV P A +ED G +LSV++ P + S +V
Sbjct: 416 FVPVPGADEEDSGAILSVVIT---PNQTSAIV 444
>RGD|1597300 [details] [associations]
symbol:Tex12 "testis expressed 12" species:10116 "Rattus
norvegicus" [GO:0000795 "synaptonemal complex" evidence=ISO]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR012606 Pfam:PF08069 RGD:1597300
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00382241 Ensembl:ENSRNOT00000059191
UCSC:RGD:1597300 ArrayExpress:F1LMB4 Uniprot:F1LMB4
Length = 481
Score = 313 (115.2 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 59/140 (42%), Positives = 90/140 (64%)
Query: 58 VQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIK 117
V V G IP W++G L+R GPG + G++ ++H FD LLH+FK+ G VTY+ KF++
Sbjct: 100 VSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFKMEKGTVTYKSKFLQ 159
Query: 118 SESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS--DNTLVSVYPIQDQVYA 175
S++Y N A RIV++ FGT +PDPC SIF+R + F+P + DNT V+ + Y
Sbjct: 160 SDTYKANSAGDRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTSVNFVQYKGDYYM 219
Query: 176 LGDSNYMHRIDPATLDTLEK 195
++N+M+++D TL+ EK
Sbjct: 220 STETNFMNKVDIETLERTEK 239
Score = 161 (61.7 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 38/92 (41%), Positives = 55/92 (59%)
Query: 351 GCETPRMN-GQHQGRPYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 408
G E P++N G+ G+ Y++FY R G +LIKV+V N T + W ++ YPSEPV
Sbjct: 359 GIEFPQINYGRFSGKKYSFFYGCGF---RHLVGDSLIKVDVVNKTLRVWREEGCYPSEPV 415
Query: 409 FVATPNAVKEDEGVLLSVLLWSHHPTRVSLLV 440
FV P A +ED G +LSV++ P + S +V
Sbjct: 416 FVPVPGADEEDSGAILSVVIT---PNQTSAIV 444
>TAIR|locus:2134093 [details] [associations]
symbol:CCD8 "carotenoid cleavage dioxygenase 8"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;RCA;NAS] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0010223 "secondary shoot formation"
evidence=IGI;IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009850 "auxin metabolic process"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0016121 "carotene catabolic process" evidence=IDA] [GO:0016124
"xanthophyll catabolic process" evidence=IDA] [GO:0009926 "auxin
polar transport" evidence=IMP] [GO:0009830 "cell wall modification
involved in abscission" evidence=RCA] GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009926 GO:GO:0046872
GO:GO:0016702 GO:GO:0009965 EMBL:AL161582 eggNOG:COG3670
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0016121 GO:GO:0010223 GO:GO:0016124 EMBL:AY074264
EMBL:AY133732 IPI:IPI00536697 PIR:T10688 RefSeq:NP_195007.2
UniGene:At.31633 ProteinModelPortal:Q8VY26 SMR:Q8VY26 STRING:Q8VY26
PRIDE:Q8VY26 EnsemblPlants:AT4G32810.1 GeneID:829417
KEGG:ath:AT4G32810 TAIR:At4g32810 HOGENOM:HOG000237971
InParanoid:Q8VY26 PhylomeDB:Q8VY26 ProtClustDB:CLSN2680232
BioCyc:ARA:AT4G32810-MONOMER BioCyc:MetaCyc:AT4G32810-MONOMER
Genevestigator:Q8VY26 Uniprot:Q8VY26
Length = 570
Score = 254 (94.5 bits), Expect = 5.0e-32, Sum P(2) = 5.0e-32
Identities = 82/264 (31%), Positives = 132/264 (50%)
Query: 48 RDCH---TEVDQPV-QG--TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHR 101
R CH T V Q +G TV+G IP+W++G +RNGPG WN+G+ F HLFD L +
Sbjct: 77 RRCHVAWTSVQQENWEGELTVQGKIPTWLNGTYLRNGPGLWNIGDHDFRHLFDGYSTLVK 136
Query: 102 FKISSGLVTYQCKFIKSESY--IKNH---AARRIVVTGFGTRFVPDPCASIFQRIATLFK 156
+ G + + ++S++Y K H R T +P + I + I LF
Sbjct: 137 LQFDGGRIFAAHRLLESDAYKAAKKHNRLCYREFSETPKSVIINKNPFSGIGE-IVRLFS 195
Query: 157 PGS--DNTLVSVYPIQD-QVYALGDSNYMH-RIDPATLDTLEKMDLARDVTILH--QTSH 210
S DN V + D +V L ++ +D TL+T+ K + DV H Q++H
Sbjct: 196 GESLTDNANTGVIKLGDGRVMCLTETQKGSILVDHETLETIGKFEYD-DVLSDHMIQSAH 254
Query: 211 PLTTSDGETFNLGVTLRPTGPRYCILQLNDVADHRVKLVTSVPVR-WKFHPGYMHTFAMT 269
P+ T + E + L L P Y ++++ + ++ ++V V R + PG++H+FA+T
Sbjct: 255 PIVT-ETEMWTLIPDL--VKPGYRVVRM-EAGSNKREVVGRVRCRSGSWGPGWVHSFAVT 310
Query: 270 PHYFIIVEQPLSISVPRLIKNSVT 293
+Y +I E PL SV L++ T
Sbjct: 311 ENYVVIPEMPLRYSVKNLLRAEPT 334
Score = 168 (64.2 bits), Expect = 5.0e-32, Sum P(2) = 5.0e-32
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 322 ARPLRFRLDLASPRTAPTGKVRPSVICDV---GCETPRMNGQHQGRPYTYFYAISADIDR 378
AR RFR+ L + GK+ +V + + +N + G+ Y Y YA A
Sbjct: 424 ARIGRFRIPLDGSKY---GKLETAVEAEKHGRAMDMCSINPLYLGQKYRYVYACGAQRPC 480
Query: 379 DNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSL 438
+ P L KV++ K+W + + PSEP FV P A ED+GV++S++ S
Sbjct: 481 NFPNALSKVDIVEKKVKNWHEHGMIPSEPFFVPRPGATHEDDGVVISIV--SEENGGSFA 538
Query: 439 LVLNARTMQELGRVNFTTPTPVPKCLHGWYFPHE 472
++L+ + +E+ R F P +P LHG + P +
Sbjct: 539 ILLDGSSFEEIARAKF--PYGLPYGLHGCWIPKD 570
Score = 39 (18.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 30 RVENGDSIFDNVDAGV 45
R+ +G+S+ DN + GV
Sbjct: 192 RLFSGESLTDNANTGV 207
>UNIPROTKB|Q83CU2 [details] [associations]
symbol:CBU_1011 "Lignostilbene-alpha,beta-dioxygenase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 185 (70.2 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 44/127 (34%), Positives = 70/127 (55%)
Query: 346 VICDVGCETPRMNG-QHQGRPYTYFYAISADIDRDNP--GTLIKVNVQNNTCKSWSQKDV 402
V+ + E PR+N + Y + Y + +D + N L+K++VQ K W +
Sbjct: 270 VLSEEPIELPRINYFLSNTKNYLFVYGVGSDKNDPNNFLNRLLKIDVQQKATKIWKETMC 329
Query: 403 YPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPK 462
YP EPVFV+ PNA KED+GV+LSV+L + LL+L+A + +E+ R + P +P
Sbjct: 330 YPGEPVFVSLPNAKKEDDGVILSVVLNAQKGNSF-LLILDAVSFKEIARAS--VPHHIPF 386
Query: 463 CLHGWYF 469
HG ++
Sbjct: 387 GFHGQFY 393
Score = 166 (63.5 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 54/174 (31%), Positives = 84/174 (48%)
Query: 122 IKNHAARRIVVTG-FG-TRFVPDPCASIFQRIATLFKPG-SDNTLVSVYPIQDQVYALGD 178
+++ A R + G G + F DPC SIF+R F P +DN V+V I D+ AL +
Sbjct: 1 MESDAYRYVKAKGKMGYSEFATDPCRSIFKRFFQAFSPRPTDNANVNVSMIADKFVALTE 60
Query: 179 SNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCILQL 238
+ DP TL+ + ++ + T+HP D ET G+ Q+
Sbjct: 61 TPMPIVFDPQTLERMGVINYEDKLKGNLTTAHP--HYDFETKE-GINYLTVFSAKSTSQI 117
Query: 239 NDVADHRV--KLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLIKN 290
V+ H +L+ S+PV+ PGYMH+F MT +Y I+ E P ++ L+ N
Sbjct: 118 YRVSHHSKTRELLGSIPVK---EPGYMHSFGMTQNYVILAEYPFFVNPLNLLLN 168
>TIGR_CMR|CBU_1011 [details] [associations]
symbol:CBU_1011 "dioxygenase, putative" species:227377
"Coxiella burnetii RSA 493" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 185 (70.2 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 44/127 (34%), Positives = 70/127 (55%)
Query: 346 VICDVGCETPRMNG-QHQGRPYTYFYAISADIDRDNP--GTLIKVNVQNNTCKSWSQKDV 402
V+ + E PR+N + Y + Y + +D + N L+K++VQ K W +
Sbjct: 270 VLSEEPIELPRINYFLSNTKNYLFVYGVGSDKNDPNNFLNRLLKIDVQQKATKIWKETMC 329
Query: 403 YPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPK 462
YP EPVFV+ PNA KED+GV+LSV+L + LL+L+A + +E+ R + P +P
Sbjct: 330 YPGEPVFVSLPNAKKEDDGVILSVVLNAQKGNSF-LLILDAVSFKEIARAS--VPHHIPF 386
Query: 463 CLHGWYF 469
HG ++
Sbjct: 387 GFHGQFY 393
Score = 166 (63.5 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 54/174 (31%), Positives = 84/174 (48%)
Query: 122 IKNHAARRIVVTG-FG-TRFVPDPCASIFQRIATLFKPG-SDNTLVSVYPIQDQVYALGD 178
+++ A R + G G + F DPC SIF+R F P +DN V+V I D+ AL +
Sbjct: 1 MESDAYRYVKAKGKMGYSEFATDPCRSIFKRFFQAFSPRPTDNANVNVSMIADKFVALTE 60
Query: 179 SNYMHRIDPATLDTLEKMDLARDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCILQL 238
+ DP TL+ + ++ + T+HP D ET G+ Q+
Sbjct: 61 TPMPIVFDPQTLERMGVINYEDKLKGNLTTAHP--HYDFETKE-GINYLTVFSAKSTSQI 117
Query: 239 NDVADHRV--KLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLIKN 290
V+ H +L+ S+PV+ PGYMH+F MT +Y I+ E P ++ L+ N
Sbjct: 118 YRVSHHSKTRELLGSIPVK---EPGYMHSFGMTQNYVILAEYPFFVNPLNLLLN 168
>ASPGD|ASPL0000049803 [details] [associations]
symbol:AN1704 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:XP_659308.1 ProteinModelPortal:Q5BCM6
EnsemblFungi:CADANIAT00008347 GeneID:2875405 KEGG:ani:AN1704.2
HOGENOM:HOG000166169 OrthoDB:EOG4WDHM3 Uniprot:Q5BCM6
Length = 575
Score = 145 (56.1 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 44/135 (32%), Positives = 67/135 (49%)
Query: 322 ARPLRFRLDLASPRT-APTGKVRPSVICD-VGCETPRMNGQHQGRPYTYFYAIS-ADIDR 378
A P+ R + P AP + S C + E +N + P+ Y YA++ +
Sbjct: 419 AIPVSSRREGEEPEPLAPLKAILVSTACHALSPELATLNPFYITHPHRYTYAVTDRGLST 478
Query: 379 DNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSL 438
G ++K + K WS+ P E +FVA P+ +ED+GVLLSV+L R L
Sbjct: 479 FVDG-IVKFDSLTGETKLWSEHAQSPGEAIFVADPDGKEEDDGVLLSVVL-DGRSGRSYL 536
Query: 439 LVLNARTMQELGRVN 453
LVL+A M+E+GR +
Sbjct: 537 LVLDAGNMKEIGRAS 551
Score = 114 (45.2 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 49 DCHTEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEE---SFD--HLFDCSGLLHRFK 103
D + E P++ +V G IP + G L R GPG + V + +F H FD HRF+
Sbjct: 23 DANHEQKTPIELSVTGSIPHYAAGTLYRTGPGRYKVDTKHGNTFQVSHWFDGFSQTHRFQ 82
Query: 104 I-------SSGLVTYQCKFIKSESYIKNHAARRIVVT-GFGTRFVPDPCASIFQRIATLF 155
+ SS V Y +F + H + FG F DPC +I+ ++ + +
Sbjct: 83 LVPPESPDSSMRVLYNSRFSTDDMIEYAHETGSLGDRFSFGG-FSSDPCEAIYSKVQSTY 141
Query: 156 KPGSDN 161
+P D+
Sbjct: 142 EPRHDS 147
Score = 67 (28.6 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 26/106 (24%), Positives = 49/106 (46%)
Query: 178 DSNYMHRIDPATLDTLEKMDLARDVTILH-QTSHPLTTSD-------GETFNLGVTLRPT 229
D++ ++ P+TL+ L LA ILH + + PL+ S G+ +N ++
Sbjct: 193 DNSTYKQLHPSTLEPLA---LATQ-GILHPELTGPLSASHAKSDPETGDVYNYNLSFSSG 248
Query: 230 GPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFII 275
P Y + +++ TS+ + P Y+H+F +T Y +I
Sbjct: 249 TPTYRVFRVSAETGE-----TSILAAFTAAPAYLHSFFLTGDYVVI 289
>UNIPROTKB|G4MX63 [details] [associations]
symbol:MGG_08016 "Retinal pigment epithelial membrane
family protein" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CM001232
RefSeq:XP_003714968.1 ProteinModelPortal:G4MX63
EnsemblFungi:MGG_08016T0 GeneID:2678282 KEGG:mgr:MGG_08016
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 Uniprot:G4MX63
Length = 558
Score = 132 (51.5 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 36/107 (33%), Positives = 55/107 (51%)
Query: 351 GCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFV 410
G E P +N ++ R + + Y ++A L+K++V WS+ SEP+FV
Sbjct: 435 GPELPSINEAYRARKHRFVYGVTATGKSTFLDGLVKLDVDTGETICWSRPGQTASEPIFV 494
Query: 411 ATPN----AVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVN 453
A P+ + ED GVLL+V+L LLVLNA+ M E+ R +
Sbjct: 495 ADPDPSVYGILEDAGVLLTVVLDGIQGESY-LLVLNAKDMTEVARAD 540
Score = 115 (45.5 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 39/123 (31%), Positives = 60/123 (48%)
Query: 51 HTEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNV-----GEESF----DHLFDCSGLLHR 101
H E++ P + TV+G IP++ GVL RNG G +V GE++ H FD +HR
Sbjct: 20 HQELE-PKELTVKGDIPAYCAGVLFRNGLGPRSVETDKNGEKTTVYKTSHWFDSFAQVHR 78
Query: 102 FKISSGLV-TYQCKFIKSESYIKNHAARRIVVTG------FGTRFVPDPCASIFQRIATL 154
F+I + + + + + + R+ TG FG + DPC S+FQ+ L
Sbjct: 79 FQIHAPTPDSPKVRVTHNSRLTSDGVVERVKRTGSLNDFTFGAK--RDPCKSLFQKAQAL 136
Query: 155 FKP 157
F P
Sbjct: 137 FAP 139
Score = 69 (29.3 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 178 DSNYMHRIDPATLDTL----EKM---DLARDVTILHQTSHPLTTSDGETFNLGVTLRPTG 230
DS M +DP TL+ + +K DLA ++ H ++ P T G+ FN + L G
Sbjct: 184 DSTMMQALDPETLEPIGVASQKRLHPDLAGPLSAAHASTCPKT---GDVFNYNLEL---G 237
Query: 231 PRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFII 275
RY ++ V+ + TS+ K+ Y+H+ ++ +Y I+
Sbjct: 238 -RYQTYRVFVVSAATGE--TSILATIKYPAAYLHSLFLSENYVIL 279
>UNIPROTKB|I3LRK8 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Ensembl:ENSSSCT00000027134 OMA:MARINDF Uniprot:I3LRK8
Length = 181
Score = 200 (75.5 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 46/130 (35%), Positives = 75/130 (57%)
Query: 343 RPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDN-PGTLIKVNVQNNTCKSWSQKD 401
+P ++C G E PR+N + G+PY Y +A A++ P +IK ++ + SW +
Sbjct: 30 QPELLCK-GLELPRINYAYNGKPYRYVFA--AEVQWSPIPTKVIKYDLLTKSSLSWGEAH 86
Query: 402 VYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPV 460
+P+EP+FV TP A ED+G++LS ++ S P ++ LLVL+A+T EL R + +
Sbjct: 87 CWPAEPLFVPTPGARDEDDGIILSAIV-STDPQKLPFLLVLDAKTFTELARASVDVDMHL 145
Query: 461 PKCLHGWYFP 470
LHG + P
Sbjct: 146 D--LHGLFIP 153
>UNIPROTKB|Q746V1 [details] [associations]
symbol:GSU3417 "Dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 172 (65.6 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 55/229 (24%), Positives = 107/229 (46%)
Query: 59 QGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKS 118
+ VEG IP+ + G L RNGP ++ G L D G++ F+ + Y +F+++
Sbjct: 57 EARVEGTIPAGLRGTLYRNGPALFDRGGMRKRTLLDGDGMVQAFRFGDRGIRYANRFVRT 116
Query: 119 ESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGD 178
+++ AA R + + T+ +++ L + G ++V+P + ++YA +
Sbjct: 117 RKFVEEEAAGRFLHPTWSTQAPGGIWTNVWPTERLLSQAG-----ITVFPWRGRLYAFDE 171
Query: 179 SNYMHRIDPATLDTLEK--MDLARDVTIL--HQTSHPLTTSDGETFNLGVTLRPTGPRYC 234
S++ + +DP TL T+ + L RD+T H P+T GE + G+ GPR
Sbjct: 172 SSFPYELDPDTLATVGETTFGLPRDLTTYSAHGKFDPVT---GEWLHFGIRY---GPRTF 225
Query: 235 ILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
+ AD ++ ++ + YMH + +T + + P+ I+
Sbjct: 226 VHLTTFNADGTLRRHRALELPRAI---YMHDWFVTERHVVFHLHPVEIA 271
Score = 89 (36.4 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 39/149 (26%), Positives = 64/149 (42%)
Query: 325 LRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTL 384
+R+R+D A G V+ CE PR++ + + RP+ Y + +
Sbjct: 368 MRYRIDPAR------GTAAREVLHQGSCEWPRIDERLRCRPHRTGYMLRCLPGEFFWSIV 421
Query: 385 IKVNVQNNTCKSWS-QKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNA 443
+ ++ +S + VY +EPVF P+ + G LL V L+ SL +L+A
Sbjct: 422 MGLDPVTGRTDEYSFGRGVYCTEPVFAPRPDTLAGGPGWLL-VELYDSRTRTSSLAILDA 480
Query: 444 RTMQE--LGRVNFTTPTPVPKCLHGWYFP 470
+ + L V T VP HGW+ P
Sbjct: 481 DRIADGPLALVRLTHH--VPFSYHGWWQP 507
Score = 41 (19.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 364 RPYTYFYAISADIDRDNPGTLIKVNVQN--NTCKSWSQKDVYPSEPVFVATPNAVKEDEG 421
RP + A+ D + P L++ +T +W ++ ++ V P+ D+
Sbjct: 289 RPERGTILMVAERDGEAPPRLVETEACYLWHTFNAWEERGKITADFVGYRNPDHFISDDP 348
Query: 422 VLLSVLL 428
V+ +V+L
Sbjct: 349 VITAVML 355
>TIGR_CMR|GSU_3417 [details] [associations]
symbol:GSU_3417 "dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 172 (65.6 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 55/229 (24%), Positives = 107/229 (46%)
Query: 59 QGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKS 118
+ VEG IP+ + G L RNGP ++ G L D G++ F+ + Y +F+++
Sbjct: 57 EARVEGTIPAGLRGTLYRNGPALFDRGGMRKRTLLDGDGMVQAFRFGDRGIRYANRFVRT 116
Query: 119 ESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGD 178
+++ AA R + + T+ +++ L + G ++V+P + ++YA +
Sbjct: 117 RKFVEEEAAGRFLHPTWSTQAPGGIWTNVWPTERLLSQAG-----ITVFPWRGRLYAFDE 171
Query: 179 SNYMHRIDPATLDTLEK--MDLARDVTIL--HQTSHPLTTSDGETFNLGVTLRPTGPRYC 234
S++ + +DP TL T+ + L RD+T H P+T GE + G+ GPR
Sbjct: 172 SSFPYELDPDTLATVGETTFGLPRDLTTYSAHGKFDPVT---GEWLHFGIRY---GPRTF 225
Query: 235 ILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSIS 283
+ AD ++ ++ + YMH + +T + + P+ I+
Sbjct: 226 VHLTTFNADGTLRRHRALELPRAI---YMHDWFVTERHVVFHLHPVEIA 271
Score = 89 (36.4 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 39/149 (26%), Positives = 64/149 (42%)
Query: 325 LRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTL 384
+R+R+D A G V+ CE PR++ + + RP+ Y + +
Sbjct: 368 MRYRIDPAR------GTAAREVLHQGSCEWPRIDERLRCRPHRTGYMLRCLPGEFFWSIV 421
Query: 385 IKVNVQNNTCKSWS-QKDVYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNA 443
+ ++ +S + VY +EPVF P+ + G LL V L+ SL +L+A
Sbjct: 422 MGLDPVTGRTDEYSFGRGVYCTEPVFAPRPDTLAGGPGWLL-VELYDSRTRTSSLAILDA 480
Query: 444 RTMQE--LGRVNFTTPTPVPKCLHGWYFP 470
+ + L V T VP HGW+ P
Sbjct: 481 DRIADGPLALVRLTHH--VPFSYHGWWQP 507
Score = 41 (19.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 364 RPYTYFYAISADIDRDNPGTLIKVNVQN--NTCKSWSQKDVYPSEPVFVATPNAVKEDEG 421
RP + A+ D + P L++ +T +W ++ ++ V P+ D+
Sbjct: 289 RPERGTILMVAERDGEAPPRLVETEACYLWHTFNAWEERGKITADFVGYRNPDHFISDDP 348
Query: 422 VLLSVLL 428
V+ +V+L
Sbjct: 349 VITAVML 355
>TAIR|locus:2134796 [details] [associations]
symbol:NCED4 "nine-cis-epoxycarotenoid dioxygenase 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
EMBL:AL021687 EMBL:AL161550 GO:GO:0016702 GO:GO:0010287
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 EMBL:AY136353 EMBL:BT008785 EMBL:AY056789
EMBL:AK227175 IPI:IPI00536835 PIR:T04438 RefSeq:NP_193652.1
UniGene:At.1927 UniGene:At.67316 ProteinModelPortal:O49675
SMR:O49675 IntAct:O49675 STRING:O49675 PaxDb:O49675 PRIDE:O49675
EnsemblPlants:AT4G19170.1 GeneID:827655 KEGG:ath:AT4G19170
TAIR:At4g19170 InParanoid:O49675 KO:K09840 OMA:HGAWVPR
PhylomeDB:O49675 ProtClustDB:CLSN2685496 Genevestigator:O49675
Uniprot:O49675
Length = 595
Score = 166 (63.5 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 60/240 (25%), Positives = 107/240 (44%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 121
+ G +P ++G IRNGP + + HLFD G+LH KI +G T +++K+ Y
Sbjct: 130 IHGTLPLSLNGAYIRNGPNPQFLPRGPY-HLFDGDGMLHAIKIHNGKATLCSRYVKTYKY 188
Query: 122 -IKNHAARRI---VVTGFG--TRFVPDPCASIFQRIATLFKP----GSDNTLVSVYPIQD 171
++ + V +GF T V + + + + P G NT ++ + +
Sbjct: 189 NVEKQTGAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFF--SN 246
Query: 172 QVYALGDSN--YMHRI-DPATLDTLEKMDLARDVTILHQTSHPLTTS-DGETFNLGVTLR 227
+++ALG+S+ Y R+ + ++T+ + D + + T+HP T GETF
Sbjct: 247 RLFALGESDLPYAVRLTESGDIETIGRYDFDGKLA-MSMTAHPKTDPITGETF--AFRYG 303
Query: 228 PTGPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRL 287
P P + + K VP+ P ++H FA+T + I E L + + L
Sbjct: 304 PVPPFLTYFRFDSAG----KKQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNML 359
>TAIR|locus:2087418 [details] [associations]
symbol:CCD1 "carotenoid cleavage dioxygenase 1"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016121 "carotene catabolic process" evidence=IMP] [GO:0016124
"xanthophyll catabolic process" evidence=IMP] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0044242 "cellular
lipid catabolic process" evidence=RCA] GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0046872 EMBL:AL163818 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121
EMBL:AJ005813 EMBL:BT000436 EMBL:BT002102 IPI:IPI00517969
PIR:T49193 PIR:T51734 RefSeq:NP_191911.1 UniGene:At.22615
UniGene:At.43820 ProteinModelPortal:O65572 SMR:O65572 STRING:O65572
PaxDb:O65572 PRIDE:O65572 EnsemblPlants:AT3G63520.1 GeneID:825527
KEGG:ath:AT3G63520 TAIR:At3g63520 HOGENOM:HOG000254836
InParanoid:O65572 KO:K11159 OMA:GVMMHDF PhylomeDB:O65572
ProtClustDB:PLN02491 Genevestigator:O65572 GO:GO:0045549
GO:GO:0016124 Uniprot:O65572
Length = 538
Score = 146 (56.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 62/248 (25%), Positives = 108/248 (43%)
Query: 57 PVQGT-VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 115
PV+ V G +P ++G +R GP + H FD G++H +I G TY ++
Sbjct: 61 PVKDLPVHGFLPECLNGEFVRVGPNPKFDAVAGY-HWFDGDGMIHGVRIKDGKATYVSRY 119
Query: 116 IKSESYIKNH---AARRIVVTG-----FGTRFVP-DPCASIFQRIATLFKPGSDNTLVSV 166
+K+ S +K A + + G FG V + + + + G+ NT + V
Sbjct: 120 VKT-SRLKQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTAL-V 177
Query: 167 YPIQDQVYAL--GDSNYMHRI-DPATLDTLEKMDLARDVTILHQ-TSHP-LTTSDGETFN 221
Y ++ AL D Y+ ++ + L TL +D + +T H T+HP + GE F
Sbjct: 178 YH-HGKLLALQEADKPYVIKVLEDGDLQTLGIIDYDKRLT--HSFTAHPKVDPVTGEMFT 234
Query: 222 LGVTLRPTGPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLS 281
G + P Y ++ + + V + S P+ MH FA+T Y I ++ P+
Sbjct: 235 FGYSHTPPYLTYRVISKDGIMHDPVPITISEPIM-------MHDFAITETYAIFMDLPMH 287
Query: 282 ISVPRLIK 289
++K
Sbjct: 288 FRPKEMVK 295
Score = 57 (25.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 31/148 (20%), Positives = 56/148 (37%)
Query: 339 TGKVRPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTL-IKVNVQNNTCKSW 397
TG + + PR+N + G+ Y Y D G + ++ + T K
Sbjct: 386 TGSASQKKLSASAVDFPRINECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRM 445
Query: 398 SQ-----KDVYP-------SEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNART 445
+ K +Y SE ++V A +ED+G L+ + + + + V++A+T
Sbjct: 446 LEVGGNIKGIYDLGEGRYGSEAIYVPRETA-EEDDGYLI-FFVHDENTGKSCVTVIDAKT 503
Query: 446 MQELGRVNFTTPTPVPKCLHGWYFPHER 473
M P VP H + E+
Sbjct: 504 MSAEPVAVVELPHRVPYGFHALFVTEEQ 531
>TAIR|locus:2032085 [details] [associations]
symbol:NCED9 "nine-cis-epoxycarotenoid dioxygenase 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0010162 "seed dormancy process"
evidence=IGI;RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC013430
GO:GO:0009570 GO:GO:0046872 GO:GO:0009688 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 ProtClustDB:PLN02258
IPI:IPI00528094 PIR:E96812 RefSeq:NP_177960.1 UniGene:At.34302
ProteinModelPortal:Q9M9F5 SMR:Q9M9F5 STRING:Q9M9F5 PaxDb:Q9M9F5
PRIDE:Q9M9F5 EnsemblPlants:AT1G78390.1 GeneID:844175
KEGG:ath:AT1G78390 TAIR:At1g78390 InParanoid:Q9M9F5 OMA:WMAVAER
PhylomeDB:Q9M9F5 BioCyc:MetaCyc:AT1G78390-MONOMER
Genevestigator:Q9M9F5 Uniprot:Q9M9F5
Length = 657
Score = 110 (43.8 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 62 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 121
V G +P I GV +RNG + S HLFD G++H + +G V+Y C+F ++
Sbjct: 201 VTGTVPECIQGVYVRNGANPLHK-PVSGHHLFDGDGMVHAVRFDNGSVSYACRFTETNRL 259
Query: 122 IKNHAARRIV 131
++ R V
Sbjct: 260 VQERECGRPV 269
Score = 79 (32.9 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 32/131 (24%), Positives = 53/131 (40%)
Query: 343 RPSVICDVGCETPRMNGQHQGRPYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKD- 401
RP + V E +N GR Y Y + G KV++ + + +
Sbjct: 524 RPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSG-FAKVDLSTGEIRKYIYGEG 582
Query: 402 VYPSEPVFVATPNAVKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVP 461
Y EP+F+ P+ E++G + V + + L ++NA M+ V T P+ VP
Sbjct: 583 KYGGEPLFL--PSGDGEEDGGYIMVFVHDEEKVKSELQLINAVNMKLEATV--TLPSRVP 638
Query: 462 KCLHGWYFPHE 472
HG + E
Sbjct: 639 YGFHGTFISKE 649
Score = 55 (24.4 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 260 PGYMHTFAMTPHYFIIVEQPLSISVPRLIK 289
P +H FA+T ++ +I +Q + +P +I+
Sbjct: 402 PTMIHDFAITENFVVIPDQQVVFRLPEMIR 431
>UNIPROTKB|O06785 [details] [associations]
symbol:MT0683 "Carotenoid cleavage oxygenase" species:1773
"Mycobacterium tuberculosis" [GO:0010436 "carotenoid dioxygenase
activity" evidence=IDA] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 EMBL:BX842574
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010436
PIR:A70534 RefSeq:NP_215168.1 RefSeq:NP_335094.1
RefSeq:YP_006513995.1 ProteinModelPortal:O06785 SMR:O06785
PRIDE:O06785 EnsemblBacteria:EBMYCT00000002162
EnsemblBacteria:EBMYCT00000072242 GeneID:13318540 GeneID:888089
GeneID:925966 KEGG:mtc:MT0683 KEGG:mtu:Rv0654 KEGG:mtv:RVBD_0654
PATRIC:18123223 TubercuList:Rv0654 HOGENOM:HOG000254835 OMA:HTLNAYD
ProtClustDB:CLSK790657 GO:GO:0016118 Uniprot:O06785
Length = 501
Score = 114 (45.2 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 48/169 (28%), Positives = 72/169 (42%)
Query: 315 RYAQMF---RARP---LRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRPYTY 368
RY++MF R P R LD + A TG V D E PR+N G P+ +
Sbjct: 335 RYSRMFDRDRRGPGGDSRPSLDRWTINLA-TGAVTAECRDDRAQEFPRINETLVGGPHRF 393
Query: 369 FYAISADID-RDNPGTLIKVNVQNNTCKSWSQK------DVYPSEPVFVATPNAVKEDEG 421
Y + + G + + C + S D+ E VFV P+A ED+G
Sbjct: 394 AYTVGIEGGFLVGAGAALSTPLYKQDCVTGSSTVASLDPDLLIGEMVFVPNPSARAEDDG 453
Query: 422 VLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 470
+L+ W LL+L+A+T++ + V+ P VP HG + P
Sbjct: 454 ILMGYG-WHRGRDEGQLLLLDAQTLESIATVHL--PQRVPMGFHGNWAP 499
Score = 63 (27.2 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 52 TEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVT- 110
T D PV G IP +DG +RNGP + + H F ++H + G
Sbjct: 26 TATDLPVTGR----IPEHLDGRYLRNGPNPVAEVDPATYHWFTGDAMVHGVALRDGKARW 81
Query: 111 YQCKFIKS 118
Y+ +++++
Sbjct: 82 YRNRWVRT 89
Score = 56 (24.8 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 41/171 (23%), Positives = 74/171 (43%)
Query: 135 FGTRFVPDP--CASIFQRIATLFKP------GSDNTLVSVYPIQDQVYALGDSNYMHRID 186
+ R+V P CA++ + I+ P G NT V + + AL ++ ++
Sbjct: 82 YRNRWVRTPAVCAALGEPISARPHPRTGIIEGGPNTNVLTHA--GRTLALVEAGVVNYEL 139
Query: 187 PATLDTLEKMDLARDVTILH--QTSHPLTTSD-GETFNLGVTL-RPTGPRYCILQLNDVA 242
LDT+ D D T LH T+HP GE + + R +Y ++ + A
Sbjct: 140 TDELDTVGPCDF--DGT-LHGGYTAHPQRDPHTGELHAVSYSFARGHRVQYSVIGTDGHA 196
Query: 243 DHRVKL-VTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRLIKNSV 292
V + V P+ MH+F++T +Y +I + P++ +++ SV
Sbjct: 197 RRTVDIEVAGSPM--------MHSFSLTDNYVVIYDLPVTFDPMQVVPASV 239
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 127 ARRIVVTGFGTRFVPDPCASIFQRI 151
AR ++ + G +PDP A++ R+
Sbjct: 247 ARLVIQSVLGRVRIPDPIAALGNRM 271
>TAIR|locus:2124489 [details] [associations]
symbol:NCED2 "nine-cis-epoxycarotenoid dioxygenase 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0009688 GO:GO:0009535 EMBL:AL161548
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AL021710
EMBL:BT030365 IPI:IPI00523545 PIR:T04531 RefSeq:NP_193569.1
UniGene:At.32916 ProteinModelPortal:O49505 SMR:O49505 STRING:O49505
EnsemblPlants:AT4G18350.1 GeneID:827562 KEGG:ath:AT4G18350
TAIR:At4g18350 InParanoid:O49505 OMA:MNAWEDG PhylomeDB:O49505
ProtClustDB:PLN02258 BioCyc:MetaCyc:AT4G18350-MONOMER
Genevestigator:O49505 Uniprot:O49505
Length = 583
Score = 137 (53.3 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 30/71 (42%), Positives = 40/71 (56%)
Query: 61 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 120
TVEG IP IDGV IRNG + HLFD G++H KI++G +Y C+F K+E
Sbjct: 123 TVEGTIPDCIDGVYIRNGANPM-FEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTER 181
Query: 121 YIKNHAARRIV 131
++ R V
Sbjct: 182 LVQEKRLGRPV 192
Score = 45 (20.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 260 PGYMHTFAMTPHYFIIVEQPLSISVPRLI 288
P +H FA+T ++ +I +Q + + +I
Sbjct: 325 PTMIHDFAITENFVVIPDQQVVFKLGEMI 353
>TAIR|locus:2202492 [details] [associations]
symbol:NCED5 "nine-cis-epoxycarotenoid dioxygenase 5"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009688
"abscisic acid biosynthetic process" evidence=IMP;TAS] [GO:0045549
"9-cis-epoxycarotenoid dioxygenase activity" evidence=TAS]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010162 "seed dormancy process" evidence=IGI] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0009414 GO:GO:0009688
GO:GO:0009579 GO:GO:0009535 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162 HOGENOM:HOG000254836
GO:GO:0045549 KO:K09840 EMBL:AC074176 ProtClustDB:PLN02258
EMBL:AK226774 IPI:IPI00530821 PIR:A86425 RefSeq:NP_174302.1
UniGene:At.51834 ProteinModelPortal:Q9C6Z1 SMR:Q9C6Z1 IntAct:Q9C6Z1
STRING:Q9C6Z1 EnsemblPlants:AT1G30100.1 GeneID:839889
KEGG:ath:AT1G30100 TAIR:At1g30100 InParanoid:Q9C6Z1 OMA:PTYVLHF
PhylomeDB:Q9C6Z1 Genevestigator:Q9C6Z1 Uniprot:Q9C6Z1
Length = 589
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 58/231 (25%), Positives = 98/231 (42%)
Query: 61 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 120
+V+G IP IDGV +RNG S HLFD G++H KI++G +Y C+F ++E
Sbjct: 130 SVDGKIPDCIDGVYLRNGANPL-FEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETER 188
Query: 121 YIKN-HAARRIVVTGFGTRFVPDPCASIFQRIAT-LF-----KPGSDNTLVSVYPIQDQV 173
++ I G A + A LF K G+ + D++
Sbjct: 189 LVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRL 248
Query: 174 YALGDSN--YMHRI-DPATLDTLEKMDLARDVT---ILHQTSHPLTTSDGETFNLGVTLR 227
A+ + + Y R+ D L+T+ + D ++ I H P+T E F L +
Sbjct: 249 LAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAMIAHPKIDPVTK---ELFALSYDVV 305
Query: 228 PTGPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQ 278
P + + + + +P+ P MH FA+T ++ +I +Q
Sbjct: 306 KK-PYLKYFKFSPEGEKSPDV--EIPLA---SPTMMHDFAITENFVVIPDQ 350
>TAIR|locus:2093751 [details] [associations]
symbol:NCED6 "nine-cis-epoxycarotenoid dioxygenase 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0009639 "response to red or far red light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0010114 GO:GO:0009688 GO:GO:0009535 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AB028621
ProtClustDB:PLN02258 IPI:IPI00526624 RefSeq:NP_189064.1
UniGene:At.37572 ProteinModelPortal:Q9LRM7 SMR:Q9LRM7 STRING:Q9LRM7
PaxDb:Q9LRM7 EnsemblPlants:AT3G24220.1 GeneID:822008
KEGG:ath:AT3G24220 TAIR:At3g24220 InParanoid:Q9LRM7 OMA:AWEERTE
PhylomeDB:Q9LRM7 BioCyc:MetaCyc:AT3G24220-MONOMER
Genevestigator:Q9LRM7 Uniprot:Q9LRM7
Length = 577
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 61/248 (24%), Positives = 106/248 (42%)
Query: 57 PVQGTVE--GVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKIS-SGLVTYQC 113
PVQ +E G IPS + GV IRNG + HLFD G++H I V+Y C
Sbjct: 112 PVQNGLEVVGQIPSCLKGVYIRNGANPM-FPPLAGHHLFDGDGMIHAVSIGFDNQVSYSC 170
Query: 114 KFIKSESYIKNHA-ARRIVVTGFGTRFVPDPCA--SIFQRIATL-FKPGSDNTLVS---V 166
++ K+ ++ A R + G A ++F A + G+ V+ V
Sbjct: 171 RYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGV 230
Query: 167 YPIQDQVYALGDSN--YMHRID-PATLDTLEKM--DLARDVTILHQTSHPLTTSDGETFN 221
++ A+ + + Y +ID L+T+ + D D +++ TT D T +
Sbjct: 231 VFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLS 290
Query: 222 LGVTLRPTGPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLS 281
V +P RY L+ N + ++P P +H FA+T ++ +I +Q +
Sbjct: 291 YNVLKKPH-LRY--LKFNTCGKKTRDVEITLP-----EPTMIHDFAITENFVVIPDQQMV 342
Query: 282 ISVPRLIK 289
+ +I+
Sbjct: 343 FKLSEMIR 350
>TAIR|locus:2091652 [details] [associations]
symbol:NCED3 "nine-cis-epoxycarotenoid dioxygenase 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009414 "response to water deprivation"
evidence=RCA;IMP] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA;IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009414 GO:GO:0009688 GO:GO:0009535 GO:GO:0042538
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 OMA:HTLNAYD
EMBL:AB028617 ProtClustDB:PLN02258 EMBL:AB026549 EMBL:AY056255
IPI:IPI00528622 RefSeq:NP_188062.1 UniGene:At.26346
ProteinModelPortal:Q9LRR7 SMR:Q9LRR7 STRING:Q9LRR7 PaxDb:Q9LRR7
EnsemblPlants:AT3G14440.1 GeneID:820667 KEGG:ath:AT3G14440
TAIR:At3g14440 InParanoid:Q9LRR7 PhylomeDB:Q9LRR7
BioCyc:ARA:AT3G14440-MONOMER BioCyc:MetaCyc:AT3G14440-MONOMER
Genevestigator:Q9LRR7 Uniprot:Q9LRR7
Length = 599
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 56/251 (22%), Positives = 102/251 (40%)
Query: 55 DQPVQGT--VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 112
+QPV+ V G +P I GV +RNG + H FD G++H K G +Y
Sbjct: 132 EQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGH-HFFDGDGMVHAVKFEHGSASYA 190
Query: 113 CKFIKSESYIKNHA-ARRIVVTGFGTRFVPDPCASI---FQRIAT-LFKPGSDNTLVS-- 165
C+F ++ +++ R + G A + + R A + P + +
Sbjct: 191 CRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAG 250
Query: 166 -VYPIQDQVYALGDSN--YMHRIDP-ATLDTLEKMDLARDVTILHQTSHP-LTTSDGETF 220
VY ++ A+ + + Y +I P L T+ + D + +HP + GE F
Sbjct: 251 LVY-FNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLEST-MIAHPKVDPESGELF 308
Query: 221 NLG--VTLRPTGPRYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQ 278
L V +P +Y + V++ P MH FA+T ++ ++ +Q
Sbjct: 309 ALSYDVVSKPY-LKYFRFSPDGTKSPDVEIQLDQPTM-------MHDFAITENFVVVPDQ 360
Query: 279 PLSISVPRLIK 289
+ +P +I+
Sbjct: 361 QVVFKLPEMIR 371
>ASPGD|ASPL0000046682 [details] [associations]
symbol:AN1643 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
OMA:HGAWVPR HOGENOM:HOG000254835 OrthoDB:EOG4GTPN5
RefSeq:XP_659247.1 ProteinModelPortal:Q5BCT7
EnsemblFungi:CADANIAT00008281 GeneID:2875358 KEGG:ani:AN1643.2
Uniprot:Q5BCT7
Length = 480
Score = 95 (38.5 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 40/176 (22%), Positives = 73/176 (41%)
Query: 114 KFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQV 173
+++++E +++ A+R ++ G G ++ + F L + NT V + Q+
Sbjct: 62 RYVQTEKFVREREAQRALLAGLG-KY-----RNRFTDAVELKVRSTANTNVVFF--NGQL 113
Query: 174 YALGDSNYMHRIDPATLDTLEKMDLARDVTILHQTSHP-LTTSDGETFNLGVTLRPTG-P 231
AL + + + +DP TLDT D + L T+HP + GE G R G P
Sbjct: 114 LALKEDSPPYALDPVTLDTKGLYDFEGQLPSLTFTAHPKFDPATGEMVCFGYEARGDGTP 173
Query: 232 RYCILQLNDVADHRVKLVTSVPVRWKFHPGYMHTFAMTPHYFIIVEQPLSISVPRL 287
C ++ + PV +H FA+T ++ I P + R+
Sbjct: 174 DVCYYSVSPTGKFTEVVWLVAPV-----VAMIHDFAVTDNWVIFPIIPQVCDLERM 224
Score = 68 (29.0 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 325 LRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRPYTYFYAISAD----IDRDN 380
+RF +D P+T P V+ + E R++ + RPY + Y D D +
Sbjct: 311 VRFTID---PQTEDLTLREPEVLQEGNSEFYRIDDRFATRPYRHCYFDLMDPQLGTDFER 367
Query: 381 PGTLIKVN--VQNNTCK---SWSQKDVY-PS------EPVFVATPNAVKEDEGVLLSVLL 428
GT I + N+ + Q +VY P EPVF+ N+ E +G +L+++
Sbjct: 368 IGTKIGGGFPLYNSLAHLDHTTGQVEVYFPGRTHLVQEPVFIPRKNSSTEGDGHVLALV- 426
Query: 429 WSHHPTRVSLL-VLNARTMQELGRVNFTTPTPVPKCLHG-W 467
+++ T S L +L+ R + P + + LHG W
Sbjct: 427 -NNYDTMASELHLLDTRDFAR-AQAKILLPVRLRQGLHGSW 465
Score = 38 (18.4 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 62 VEGVIPSWIDGVLIRNGP 79
V G IP IDGV R P
Sbjct: 32 VYGEIPKDIDGVFYRVMP 49
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 476 476 0.00078 119 3 11 22 0.36 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 621 (66 KB)
Total size of DFA: 322 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 37.77u 0.10s 37.87t Elapsed: 00:00:25
Total cpu time: 37.78u 0.10s 37.88t Elapsed: 00:00:28
Start: Thu Aug 15 13:33:00 2013 End: Thu Aug 15 13:33:28 2013