Query psy5324
Match_columns 131
No_of_seqs 131 out of 503
Neff 5.6
Searched_HMMs 46136
Date Fri Aug 16 23:43:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5324.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5324hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3736|consensus 100.0 6.7E-48 1.5E-52 338.6 5.0 128 1-128 315-460 (578)
2 KOG3738|consensus 100.0 1.9E-45 4.1E-50 312.4 4.2 128 1-128 293-439 (559)
3 KOG3737|consensus 100.0 5.6E-36 1.2E-40 254.8 2.5 114 1-114 333-459 (603)
4 cd02510 pp-GalNAc-T pp-GalNAc- 99.9 2.2E-27 4.7E-32 189.9 9.6 115 1-115 171-294 (299)
5 PF02709 Glyco_transf_7C: N-te 99.5 8.1E-15 1.8E-19 99.5 3.5 56 2-57 20-76 (78)
6 PF10111 Glyco_tranf_2_2: Glyc 99.3 2.1E-12 4.5E-17 103.8 4.6 75 2-83 169-244 (281)
7 COG1216 Predicted glycosyltran 99.2 3.2E-11 6.9E-16 97.7 6.1 59 1-60 167-225 (305)
8 cd00899 b4GalT Beta-4-Galactos 99.1 1.2E-10 2.6E-15 92.8 6.3 58 2-59 112-171 (219)
9 cd06420 GT2_Chondriotin_Pol_N 99.0 4.9E-10 1.1E-14 81.7 5.9 55 2-56 127-182 (182)
10 TIGR01556 rhamnosyltran L-rham 98.8 3.7E-09 8E-14 83.6 5.2 52 6-58 153-204 (281)
11 cd04186 GT_2_like_c Subfamily 98.8 9.2E-09 2E-13 72.8 5.5 53 2-55 113-165 (166)
12 cd02526 GT2_RfbF_like RfbF is 98.8 1.6E-08 3.4E-13 76.8 6.2 55 3-58 153-207 (237)
13 PF13641 Glyco_tranf_2_3: Glyc 98.7 3.7E-08 8E-13 74.5 5.9 53 2-57 160-212 (228)
14 PF13632 Glyco_trans_2_3: Glyc 98.5 2.2E-07 4.7E-12 69.2 6.0 53 1-55 72-124 (193)
15 cd04184 GT2_RfbC_Mx_like Myxoc 98.5 1E-07 2.2E-12 70.5 4.2 48 2-51 150-197 (202)
16 cd02525 Succinoglycan_BP_ExoA 98.5 2.2E-07 4.8E-12 70.3 5.9 54 2-57 157-210 (249)
17 cd06435 CESA_NdvC_like NdvC_li 98.5 1.6E-07 3.4E-12 71.6 4.7 51 2-55 159-209 (236)
18 cd04185 GT_2_like_b Subfamily 98.5 2.5E-07 5.4E-12 68.9 5.6 54 3-58 123-176 (202)
19 cd02522 GT_2_like_a GT_2_like_ 98.4 7.5E-07 1.6E-11 66.7 6.4 46 3-52 138-183 (221)
20 cd02520 Glucosylceramide_synth 98.4 3.9E-07 8.5E-12 68.4 4.0 54 2-56 125-178 (196)
21 cd06437 CESA_CaSu_A2 Cellulose 98.3 5.2E-07 1.1E-11 68.9 4.2 53 3-58 164-216 (232)
22 cd06421 CESA_CelA_like CESA_Ce 98.3 1.4E-06 3.1E-11 65.6 5.2 52 2-56 161-212 (234)
23 PRK11204 N-glycosyltransferase 98.2 2E-06 4.3E-11 71.9 5.9 53 2-57 210-262 (420)
24 cd06427 CESA_like_2 CESA_like_ 98.2 1.1E-06 2.4E-11 67.9 3.0 48 2-52 162-209 (241)
25 cd04192 GT_2_like_e Subfamily 98.2 3.4E-06 7.5E-11 63.0 5.3 51 2-53 156-209 (229)
26 cd06433 GT_2_WfgS_like WfgS an 98.1 3.3E-06 7E-11 61.3 4.2 54 2-57 143-196 (202)
27 PRK14583 hmsR N-glycosyltransf 98.0 1.2E-05 2.7E-10 68.6 6.6 52 2-56 231-282 (444)
28 cd06913 beta3GnTL1_like Beta 1 98.0 9.1E-06 2E-10 61.6 5.2 50 6-56 161-210 (219)
29 TIGR03469 HonB hopene-associat 98.0 1E-05 2.2E-10 67.8 4.9 51 2-53 210-260 (384)
30 TIGR03472 HpnI hopanoid biosyn 97.9 5.2E-06 1.1E-10 69.2 2.4 53 2-55 201-253 (373)
31 cd04195 GT2_AmsE_like GT2_AmsE 97.8 1E-05 2.2E-10 59.9 1.5 49 2-53 151-199 (201)
32 TIGR03111 glyc2_xrt_Gpos1 puta 97.6 4.6E-05 1E-09 65.1 3.9 52 2-56 216-268 (439)
33 KOG3588|consensus 97.6 5.8E-05 1.3E-09 65.2 4.0 56 4-59 386-441 (494)
34 cd06442 DPM1_like DPM1_like re 97.6 7.8E-05 1.7E-09 55.8 4.0 53 2-57 152-205 (224)
35 KOG3916|consensus 97.5 8.2E-05 1.8E-09 63.2 3.1 54 2-55 261-319 (372)
36 TIGR03030 CelA cellulose synth 97.3 0.00046 9.9E-09 62.8 5.4 51 2-55 308-358 (713)
37 PF13506 Glyco_transf_21: Glyc 97.2 0.00033 7.2E-09 53.3 3.6 50 2-52 102-151 (175)
38 PRK11498 bcsA cellulose syntha 97.2 0.0017 3.8E-08 60.7 9.0 49 2-53 419-467 (852)
39 COG4092 Predicted glycosyltran 97.2 0.00029 6.3E-09 58.7 3.5 51 3-56 179-229 (346)
40 PLN02726 dolichyl-phosphate be 97.2 0.00052 1.1E-08 53.2 4.1 54 2-57 167-220 (243)
41 PF13712 Glyco_tranf_2_5: Glyc 97.2 0.00059 1.3E-08 53.7 4.4 52 2-58 148-200 (217)
42 PRK14716 bacteriophage N4 adso 97.0 0.0011 2.4E-08 58.6 5.4 47 2-51 233-285 (504)
43 COG1215 Glycosyltransferases, 97.0 0.0012 2.6E-08 54.7 5.3 48 2-52 215-262 (439)
44 cd06434 GT2_HAS Hyaluronan syn 96.8 0.00075 1.6E-08 51.0 2.1 53 2-55 153-213 (235)
45 cd04191 Glucan_BSP_ModH Glucan 96.6 0.0039 8.5E-08 50.0 5.2 49 3-51 173-227 (254)
46 cd04190 Chitin_synth_C C-termi 96.6 0.0024 5.2E-08 49.9 3.9 55 1-56 149-223 (244)
47 cd06439 CESA_like_1 CESA_like_ 96.2 0.0039 8.4E-08 47.7 2.9 50 2-57 182-231 (251)
48 cd04196 GT_2_like_d Subfamily 96.2 0.0059 1.3E-07 44.9 3.6 49 2-53 153-201 (214)
49 PF05679 CHGN: Chondroitin N-a 96.1 0.011 2.4E-07 52.0 5.7 56 4-59 412-471 (499)
50 cd00761 Glyco_tranf_GTA_type G 94.2 0.043 9.3E-07 36.8 2.6 38 4-42 115-152 (156)
51 cd04188 DPG_synthase DPG_synth 93.9 0.084 1.8E-06 39.5 3.9 46 4-51 159-204 (211)
52 PRK11234 nfrB bacteriophage N4 93.5 0.11 2.4E-06 48.1 4.6 45 2-49 230-280 (727)
53 PRK10018 putative glycosyl tra 92.2 0.5 1.1E-05 38.4 6.3 50 3-55 157-207 (279)
54 PF11397 GlcNAc: Glycosyltrans 91.9 0.2 4.3E-06 42.5 3.8 56 2-59 209-266 (343)
55 KOG3917|consensus 91.6 0.16 3.4E-06 41.8 2.7 44 2-45 182-225 (310)
56 PRK10063 putative glycosyl tra 89.2 0.83 1.8E-05 36.1 4.9 48 3-53 147-194 (248)
57 PRK15489 nfrB bacteriophage N4 87.0 0.95 2.1E-05 42.0 4.5 42 2-46 238-285 (703)
58 PRK05454 glucosyltransferase M 85.7 1.6 3.5E-05 40.3 5.3 48 3-50 298-351 (691)
59 PF13896 Glyco_transf_49: Glyc 83.6 1.7 3.6E-05 36.2 4.1 43 15-57 242-284 (317)
60 PRK10073 putative glycosyl tra 79.9 6 0.00013 32.6 6.1 43 7-52 170-213 (328)
61 PRK13915 putative glucosyl-3-p 38.5 20 0.00044 29.4 1.7 41 3-48 196-238 (306)
62 PF08260 Kinin: Insect kinin p 37.4 16 0.00034 14.8 0.5 8 20-27 1-8 (8)
63 KOG2416|consensus 27.1 14 0.00031 34.2 -1.1 49 48-96 442-490 (718)
64 PF10664 NdhM: Cyanobacterial 22.2 77 0.0017 22.9 2.1 27 28-54 72-98 (108)
65 KOG2288|consensus 21.8 41 0.00088 28.1 0.7 46 2-49 175-220 (274)
66 PF03385 DUF288: Protein of un 21.5 80 0.0017 27.6 2.5 25 37-63 15-39 (390)
No 1
>KOG3736|consensus
Probab=100.00 E-value=6.7e-48 Score=338.58 Aligned_cols=128 Identities=55% Similarity=1.020 Sum_probs=119.0
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCCCCcCCCCCCcccchhHHHHH
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHHPYTFPGGKDTHGINTARLVE 80 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~Py~~~~~~~~~~~N~~R~ae 80 (131)
|+||+|||+|+||.+||+||+||++|||||+|||||||+|||+++++|||||||+||+..||++|++..++.+|.+|+||
T Consensus 315 MaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVGHifRk~~pY~~p~~~~~~~~N~~RlAe 394 (578)
T KOG3736|consen 315 MAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVGHIFRKRKPYTFPDGTDTATRNLKRLAE 394 (578)
T ss_pred cCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCccceeeeeecCCCccCCCcchhhhhchhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999998777899999999999
Q ss_pred HHHhhhhhHHHhccccchhh----ccccc--------------cCCCCCCccccCcCCcccccccc
Q psy5324 81 IWMDDYKRLFYAHRRDLVDK----IRPRR--------------ESNPRPSAYKADALPTKLTRLTS 128 (131)
Q Consensus 81 vW~de~k~~fy~~~p~~~~~----i~~R~--------------~~~~~P~~~~~~~~p~~~~~~~~ 128 (131)
|||||||++||++.|.++++ +++|+ ++|+||++++|...|.++|+|+|
T Consensus 395 VWmDeyK~~~y~~~P~~~~~d~GDvseR~~LR~~L~CKsFkWyL~nVyPel~~~~~~~~~~G~i~~ 460 (578)
T KOG3736|consen 395 VWMDEYKEQFYKRMPGLRNIDEGDLTERKALRERLNCKSFKWYLENVYPELYLPTPHVYASGEIRN 460 (578)
T ss_pred hhhHHHHHHHHhhCccccccCCCCchhHHHHHHhcCCccccchHhhcCccccCCCCcccccceecc
Confidence 99999999999999999874 44444 35777888899999999999998
No 2
>KOG3738|consensus
Probab=100.00 E-value=1.9e-45 Score=312.37 Aligned_cols=128 Identities=48% Similarity=0.937 Sum_probs=113.7
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCCCCcCCC-CCCcccchhHHHH
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHHPYTFPG-GKDTHGINTARLV 79 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~Py~~~~-~~~~~~~N~~R~a 79 (131)
||||+|+|+|+||++||.||..|++|||||+|||||+|||||+++|+|||||||+||+.|||++|+ ...+..+|.+|+|
T Consensus 293 iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFRkrHpy~FP~gs~~ty~~NTkr~A 372 (559)
T KOG3738|consen 293 IAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNTYIKNTKRAA 372 (559)
T ss_pred ccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhhccCCCcCCCCCCcchhhcchHHH
Confidence 689999999999999999999999999999999999999999999999999999999999999984 5678899999999
Q ss_pred HHHHhhhhhHHHhccccchhh--------ccccccCCCCCCcc----------ccCcCCcccccccc
Q psy5324 80 EIWMDDYKRLFYAHRRDLVDK--------IRPRRESNPRPSAY----------KADALPTKLTRLTS 128 (131)
Q Consensus 80 evW~de~k~~fy~~~p~~~~~--------i~~R~~~~~~P~~~----------~~~~~p~~~~~~~~ 128 (131)
||||||||.+||...|.++.+ ++.|+..+|+||.| +|.--+.+.|.|++
T Consensus 373 EvWmDEYK~~yyaarPsAr~vpfg~i~~rL~~Rk~l~CksFkWYLenVyPeL~ip~~~~~~~g~lrq 439 (559)
T KOG3738|consen 373 EVWMDEYKNYYYAARPSARRVPFGNIYDRLELRKKLRCKSFKWYLENVYPELRIPFKELIATGTLRQ 439 (559)
T ss_pred HHHHHHHHHHHHhcCchhhcCCCccHHHHHHHHhhcCCcchhhhhhhcCcceeccccccccccchhc
Confidence 999999999999999999865 56777666666665 55556666666654
No 3
>KOG3737|consensus
Probab=100.00 E-value=5.6e-36 Score=254.80 Aligned_cols=114 Identities=47% Similarity=0.980 Sum_probs=104.9
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCCCCcCC-----CCCCcccchh
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHHPYTFP-----GGKDTHGINT 75 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~Py~~~-----~~~~~~~~N~ 75 (131)
+|||+|||+|+||.|||.||||+++|||||+|||+++|+|||++++||||||||+||+..||++. .+...+..|+
T Consensus 333 hAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVPCSrVGHvYR~~mpy~fgk~~~k~~~p~i~iNy 412 (603)
T KOG3737|consen 333 HAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVPCSRVGHVYRSLMPYQFGKPPIKVGSPPILINY 412 (603)
T ss_pred cccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEEccccchhhhccccccCCCCccccCCCceEeeh
Confidence 68999999999999999999999999999999999999999999999999999999999999984 1346788999
Q ss_pred HHHHHHHHhhhhhHHHhccccchhh----cc----ccccCCCCCCcc
Q psy5324 76 ARLVEIWMDDYKRLFYAHRRDLVDK----IR----PRRESNPRPSAY 114 (131)
Q Consensus 76 ~R~aevW~de~k~~fy~~~p~~~~~----i~----~R~~~~~~P~~~ 114 (131)
+|+.++|+|+||+|||.+.|.++.+ |+ .|...||+-|.|
T Consensus 413 ~RVvetW~Ddyk~YfytreP~a~~l~~GDISeqlalr~~lnCkSFkW 459 (603)
T KOG3737|consen 413 VRVVETWWDDYKDYFYTREPEAQALPYGDISEQLALREDLNCKSFKW 459 (603)
T ss_pred hhHHHHHHHhhhhheeecChhhccCCcccHHHHHHhHhhcCCchhHH
Confidence 9999999999999999999998865 55 455789999999
No 4
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.94 E-value=2.2e-27 Score=189.90 Aligned_cols=115 Identities=55% Similarity=1.109 Sum_probs=103.2
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc-CCCCCcCCCCCCcccchhHHHH
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR-SHHPYTFPGGKDTHGINTARLV 79 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r-~~~Py~~~~~~~~~~~N~~R~a 79 (131)
++|+||+|+|+.|+++|||||+|..||+||+|||+|+|+||+++.++|+++|.|+++ ...||..+.....+.+|..|++
T Consensus 171 ~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~ 250 (299)
T cd02510 171 MAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPYTFPGGSGTVLRNYKRVA 250 (299)
T ss_pred ccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEeccccCCCCCCCCcccHHHHHHHHHH
Confidence 469999999999999999999999999999999999999999999999999999999 7889987754446889999999
Q ss_pred HHHHhhhhhHHHhccccchhh----cc----ccccCCCCCCccc
Q psy5324 80 EIWMDDYKRLFYAHRRDLVDK----IR----PRRESNPRPSAYK 115 (131)
Q Consensus 80 evW~de~k~~fy~~~p~~~~~----i~----~R~~~~~~P~~~~ 115 (131)
++|+|++++++|+.+|.++.+ +. .+++++||||-|.
T Consensus 251 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 294 (299)
T cd02510 251 EVWMDEYKEYFYKARPELRNIDYGDLSERKALRERLKCKSFKWY 294 (299)
T ss_pred HHHHHHHHHHHHhcCcccccCCCCCHHHHHHHHHHcCCCCchHH
Confidence 999999999999999999863 22 3336899999984
No 5
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=99.52 E-value=8.1e-15 Score=99.50 Aligned_cols=56 Identities=32% Similarity=0.665 Sum_probs=45.3
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEE-eecc
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIG-HIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~-Hi~r 57 (131)
.||.++++|+.|.++|||||.|..||+||.||+.|++.+|.++..+|++.+. |+.+
T Consensus 20 ~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~~~yh~~~ 76 (78)
T PF02709_consen 20 FGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSIGRYHLWK 76 (78)
T ss_dssp --SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTTTEEEEEE
T ss_pred eEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCceEEEEEee
Confidence 6999999999999999999999999999999999999999999999998884 8764
No 6
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.30 E-value=2.1e-12 Score=103.84 Aligned_cols=75 Identities=21% Similarity=0.365 Sum_probs=61.5
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCCCCcCCCCCCcccchhHHH-HH
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHHPYTFPGGKDTHGINTARL-VE 80 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~Py~~~~~~~~~~~N~~R~-ae 80 (131)
.|+|++|+|+.|.++|||||.|.+||+||+||+.|+...|..+...|...+.|..+... . ....|+..+. +.
T Consensus 169 ~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~~~~~~--~-----~~g~R~~~~~~~~ 241 (281)
T PF10111_consen 169 ASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHSHRWPI--K-----YKGFRAYFSYYGL 241 (281)
T ss_pred cceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhcccccCCCc--c-----chHHHHHHHHhhh
Confidence 57999999999999999999999999999999999999999999999999988754321 1 2356666654 33
Q ss_pred HHH
Q psy5324 81 IWM 83 (131)
Q Consensus 81 vW~ 83 (131)
-|+
T Consensus 242 ~~~ 244 (281)
T PF10111_consen 242 PWF 244 (281)
T ss_pred HHH
Confidence 444
No 7
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.19 E-value=3.2e-11 Score=97.73 Aligned_cols=59 Identities=22% Similarity=0.434 Sum_probs=55.2
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCC
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHH 60 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~ 60 (131)
++|+|++|+|+.|+++|+|||.+++| .||+|+|+|+++.|+++.++|.+.|.|....+.
T Consensus 167 ~~G~~~li~~~~~~~vG~~de~~F~y-~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s~ 225 (305)
T COG1216 167 LSGACLLIRREAFEKVGGFDERFFIY-YEDVDLCLRARKAGYKIYYVPDAIIYHKIGSSK 225 (305)
T ss_pred cceeeeEEcHHHHHHhCCCCccccee-ehHHHHHHHHHHcCCeEEEeeccEEEEeccCCC
Confidence 47999999999999999999999999 899999999999999999999999999866543
No 8
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=99.12 E-value=1.2e-10 Score=92.84 Aligned_cols=58 Identities=22% Similarity=0.375 Sum_probs=52.0
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecce--EEeeccCC
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSR--IGHIFRSH 59 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~sr--V~Hi~r~~ 59 (131)
.||+++++|+.|.+++|||++|.+||+||.||+.|+|..|.++.-.+.+. +.|+....
T Consensus 112 ~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~ 171 (219)
T cd00899 112 FGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIH 171 (219)
T ss_pred cccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCC
Confidence 59999999999999999999999999999999999999999999998643 56666543
No 9
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.03 E-value=4.9e-10 Score=81.69 Aligned_cols=55 Identities=20% Similarity=0.376 Sum_probs=49.6
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcC-CeEEEeecceEEeec
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCG-GSLECVPCSRIGHIF 56 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~G-g~~~~~P~srV~Hi~ 56 (131)
.|+.+++.|+.|.++||||+.+..||+||+|+++|++.+| ....+.|.+.+.|++
T Consensus 127 ~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h~~ 182 (182)
T cd06420 127 RGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFHLW 182 (182)
T ss_pred ccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeeecC
Confidence 5788999999999999999999999999999999999999 666666689999874
No 10
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.85 E-value=3.7e-09 Score=83.63 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=48.2
Q ss_pred EEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccC
Q psy5324 6 FAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRS 58 (131)
Q Consensus 6 fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~ 58 (131)
++++|+.|+++|+|||.|+++ +||+|+|+|++..|+++.++|.+.+.|....
T Consensus 153 ~li~~~~~~~iG~fde~~fi~-~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~ 204 (281)
T TIGR01556 153 CLITREVYQRLGMMDEELFID-HVDTEWSLRAQNYGIPLYIDPDIVLEHRIGD 204 (281)
T ss_pred ceeeHHHHHHhCCccHhhccc-chHHHHHHHHHHCCCEEEEeCCEEEEEecCC
Confidence 469999999999999999998 6999999999999999999999999997543
No 11
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.80 E-value=9.2e-09 Score=72.81 Aligned_cols=53 Identities=26% Similarity=0.456 Sum_probs=50.2
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEee
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHI 55 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi 55 (131)
.|++++++|+.|.++|+||+.+.. ++||+|++.|+...|+++.+.|++.|.|.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~~~~~~h~ 165 (166)
T cd04186 113 SGAFLLVRREVFEEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVPQAVIYHH 165 (166)
T ss_pred ceeeEeeeHHHHHHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEccceEEEec
Confidence 689999999999999999999887 47999999999999999999999999995
No 12
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=98.77 E-value=1.6e-08 Score=76.80 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=49.6
Q ss_pred CcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccC
Q psy5324 3 GGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRS 58 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~ 58 (131)
|++++++|+.|+++||||+.+.+ ++||+|+++|+++.|+++.++|++.|.|....
T Consensus 153 ~~~~~~rr~~~~~~ggfd~~~~~-~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~ 207 (237)
T cd02526 153 TSGSLISLEALEKVGGFDEDLFI-DYVDTEWCLRARSKGYKIYVVPDAVLKHELGD 207 (237)
T ss_pred ccceEEcHHHHHHhCCCCHHHcC-ccchHHHHHHHHHcCCcEEEEcCeEEEecccC
Confidence 56678999999999999999975 58999999999999999999999999987543
No 13
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=98.69 E-value=3.7e-08 Score=74.49 Aligned_cols=53 Identities=21% Similarity=0.351 Sum_probs=40.8
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
.|++++++|+.|+++||||+ ... +||.|+++|++..|+++.++|.+.|.|...
T Consensus 160 ~G~~~~~rr~~~~~~g~fd~--~~~-~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~ 212 (228)
T PF13641_consen 160 SGSGMLFRRSALEEVGGFDP--FIL-GEDFDLCLRLRAAGWRIVYAPDALVYHEEP 212 (228)
T ss_dssp --TEEEEEHHHHHHH-S--S--SSS-SHHHHHHHHHHHTT--EEEEEEEEEEE--S
T ss_pred cCcEEEEEHHHHHHhCCCCC--CCc-ccHHHHHHHHHHCCCcEEEECCcEEEEeCC
Confidence 58999999999999999999 455 599999999999999999999999998853
No 14
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=98.52 E-value=2.2e-07 Score=69.17 Aligned_cols=53 Identities=23% Similarity=0.381 Sum_probs=47.2
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEee
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHI 55 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi 55 (131)
.+|++++++++.++++|+|| ..... +||.|+|+|+++.|+++.++|.+.+.|.
T Consensus 72 ~~G~~~~~r~~~l~~vg~~~-~~~~~-~ED~~l~~~l~~~G~~~~~~~~~~~~~~ 124 (193)
T PF13632_consen 72 LSGSGMLFRREALREVGGFD-DPFSI-GEDMDLGFRLRRAGYRIVYVPDAIVYTE 124 (193)
T ss_pred ccCcceeeeHHHHHHhCccc-ccccc-cchHHHHHHHHHCCCEEEEecccceeee
Confidence 36889999999999999999 66677 5999999999999999999999877554
No 15
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.52 E-value=1e-07 Score=70.50 Aligned_cols=48 Identities=19% Similarity=0.394 Sum_probs=42.7
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecce
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSR 51 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~sr 51 (131)
.++..+++|+.|.++||||+++. ++||.||++|++.+|+++.++|...
T Consensus 150 ~~~~~~~~r~~~~~iggf~~~~~--~~eD~~l~~rl~~~g~~~~~~~~~~ 197 (202)
T cd04184 150 IGHLLVYRRSLVRQVGGFREGFE--GAQDYDLVLRVSEHTDRIAHIPRVL 197 (202)
T ss_pred ccceEeEEHHHHHHhCCCCcCcc--cchhHHHHHHHHhccceEEEccHhh
Confidence 35667899999999999999965 5799999999999999999999743
No 16
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=98.51 E-value=2.2e-07 Score=70.27 Aligned_cols=54 Identities=22% Similarity=0.268 Sum_probs=49.1
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
+|++++++|+.|.++|+||+.+. . +||.||++|++++|+++.++|...+.|..+
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~-~-~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~ 210 (249)
T cd02525 157 TVHHGAYRREVFEKVGGFDESLV-R-NEDAELNYRLRKAGYKIWLSPDIRVYYYPR 210 (249)
T ss_pred ccccceEEHHHHHHhCCCCcccC-c-cchhHHHHHHHHcCcEEEEcCCeEEEEcCC
Confidence 57788999999999999999975 3 699999999999999999999999998764
No 17
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=98.50 E-value=1.6e-07 Score=71.55 Aligned_cols=51 Identities=20% Similarity=0.208 Sum_probs=45.3
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEee
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHI 55 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi 55 (131)
+|++++++|+.|.++||||+.+ + +||.||++|++..|.++.++|.+.+.|.
T Consensus 159 ~g~~~~~rr~~~~~iGgf~~~~--~-~eD~dl~~r~~~~G~~~~~~~~~~~~~~ 209 (236)
T cd06435 159 HGTMCLIRRSALDDVGGWDEWC--I-TEDSELGLRMHEAGYIGVYVAQSYGHGL 209 (236)
T ss_pred ecceEEEEHHHHHHhCCCCCcc--c-cchHHHHHHHHHCCcEEEEcchhhccCc
Confidence 4778999999999999999975 3 7999999999999999999999776443
No 18
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.49 E-value=2.5e-07 Score=68.86 Aligned_cols=54 Identities=20% Similarity=0.318 Sum_probs=49.5
Q ss_pred CcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccC
Q psy5324 3 GGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRS 58 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~ 58 (131)
++.++++|+.|.++|+||+.+.+| +||+|+++|++..|.++ ++|.+.+.|....
T Consensus 123 ~~~~~~~~~~~~~~g~~~~~~~~~-~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~ 176 (202)
T cd04185 123 FVGVLISRRVVEKIGLPDKEFFIW-GDDTEYTLRASKAGPGI-YVPDAVVVHKTAI 176 (202)
T ss_pred eEEEEEeHHHHHHhCCCChhhhcc-chHHHHHHHHHHcCCcE-EecceEEEEcccc
Confidence 356889999999999999999988 59999999999999999 9999999998754
No 19
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.41 E-value=7.5e-07 Score=66.71 Aligned_cols=46 Identities=22% Similarity=0.232 Sum_probs=40.2
Q ss_pred CcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceE
Q psy5324 3 GGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRI 52 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV 52 (131)
+.+++++|+.|+++|+||+.+ ++||+||++|++.+|+.+.+ |...+
T Consensus 138 ~~~~~~r~~~~~~~G~fd~~~---~~ED~d~~~r~~~~G~~~~~-~~~~~ 183 (221)
T cd02522 138 DQGLFIRRELFEELGGFPELP---LMEDVELVRRLRRRGRPALL-PSPVT 183 (221)
T ss_pred CceEEEEHHHHHHhCCCCccc---cccHHHHHHHHHhCCCEEEc-Cceee
Confidence 457899999999999999998 47999999999999999987 54444
No 20
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=98.37 E-value=3.9e-07 Score=68.37 Aligned_cols=54 Identities=15% Similarity=0.253 Sum_probs=46.0
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeec
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIF 56 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~ 56 (131)
.|++++++|+.|+++||||+ +....+||.||++|+...|+++.++|.+.+.|..
T Consensus 125 ~g~~~~~r~~~~~~~ggf~~-~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~ 178 (196)
T cd02520 125 FGKSMALRREVLDAIGGFEA-FADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLG 178 (196)
T ss_pred cCceeeeEHHHHHhccChHH-HhHHHHHHHHHHHHHHHcCCeEEEcchheeccCC
Confidence 58899999999999999985 4333479999999999999999999997665544
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=98.34 E-value=5.2e-07 Score=68.94 Aligned_cols=53 Identities=13% Similarity=0.212 Sum_probs=46.6
Q ss_pred CcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccC
Q psy5324 3 GGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRS 58 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~ 58 (131)
|+.++++|+.|+++||||+.+ + +||+||++|+++.|+++.++|++.|.|..+.
T Consensus 164 g~~~~~rr~~~~~vgg~~~~~--~-~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~ 216 (232)
T cd06437 164 GTAGVWRKECIEDAGGWNHDT--L-TEDLDLSYRAQLKGWKFVYLDDVVVPAELPA 216 (232)
T ss_pred cchhhhhHHHHHHhCCCCCCc--c-hhhHHHHHHHHHCCCeEEEeccceeeeeCCc
Confidence 556678999999999999864 3 7999999999999999999999999887643
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=98.27 E-value=1.4e-06 Score=65.56 Aligned_cols=52 Identities=23% Similarity=0.236 Sum_probs=46.2
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeec
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIF 56 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~ 56 (131)
.|++++++|+.|+++|+||+.+ .+||+|+++|++..|+++.++|...+.|..
T Consensus 161 ~g~~~~~r~~~~~~ig~~~~~~---~~eD~~l~~r~~~~g~~i~~~~~~~~~~~~ 212 (234)
T cd06421 161 CGSGAVVRREALDEIGGFPTDS---VTEDLATSLRLHAKGWRSVYVPEPLAAGLA 212 (234)
T ss_pred cCceeeEeHHHHHHhCCCCccc---eeccHHHHHHHHHcCceEEEecCccccccC
Confidence 5889999999999999999764 279999999999999999999998887643
No 23
>PRK11204 N-glycosyltransferase; Provisional
Probab=98.24 E-value=2e-06 Score=71.89 Aligned_cols=53 Identities=19% Similarity=0.339 Sum_probs=48.6
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
+|++++++|+.++++||||+.+. +||.|+++|+...|+++.++|++.+.|..+
T Consensus 210 ~G~~~~~rr~~l~~vgg~~~~~~---~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p 262 (420)
T PRK11204 210 SGVITAFRKSALHEVGYWSTDMI---TEDIDISWKLQLRGWDIRYEPRALCWILMP 262 (420)
T ss_pred cceeeeeeHHHHHHhCCCCCCcc---cchHHHHHHHHHcCCeEEeccccEEEeECc
Confidence 68889999999999999999864 699999999999999999999999988653
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=98.18 E-value=1.1e-06 Score=67.90 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=42.0
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceE
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRI 52 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV 52 (131)
.|++++++|+.|+++||||+. .+ +||.||++|++..|+++.++|...+
T Consensus 162 ~g~~~~~rr~~~~~vgg~~~~--~~-~eD~~l~~rl~~~G~r~~~~~~~~~ 209 (241)
T cd06427 162 GGTSNHFRTDVLRELGGWDPF--NV-TEDADLGLRLARAGYRTGVLNSTTL 209 (241)
T ss_pred CCchHHhhHHHHHHcCCCCcc--cc-hhhHHHHHHHHHCCceEEEeccccc
Confidence 477789999999999999984 34 7999999999999999999987544
No 25
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.17 E-value=3.4e-06 Score=62.97 Aligned_cols=51 Identities=14% Similarity=0.217 Sum_probs=43.3
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCC-eEEEee--cceEE
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGG-SLECVP--CSRIG 53 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg-~~~~~P--~srV~ 53 (131)
.|++++++|+.|+++||||+.+..+ +||.|+++|+.+.|+ ++.+++ ++.+.
T Consensus 156 ~g~~~~~rr~~~~~~ggf~~~~~~~-~eD~~~~~~~~~~g~~~~~~~~~~~~~~~ 209 (229)
T cd04192 156 NGANMAYRKEAFFEVGGFEGNDHIA-SGDDELLLAKVASKYPKVAYLKNPEALVT 209 (229)
T ss_pred ccceEEEEHHHHHHhcCCccccccc-cCCHHHHHHHHHhCCCCEEEeeCcchhee
Confidence 4788999999999999999987766 799999999999999 887764 45443
No 26
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.12 E-value=3.3e-06 Score=61.31 Aligned_cols=54 Identities=13% Similarity=0.269 Sum_probs=46.4
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
.+++++++|+.|.++|+||+.+. + +||.|+++|++..|+.+.+.|...+.|..+
T Consensus 143 ~~~~~~~~~~~~~~~~~f~~~~~-~-~~D~~~~~r~~~~g~~~~~~~~~~~~~~~~ 196 (202)
T cd06433 143 CHQATFFRRSLFEKYGGFDESYR-I-AADYDLLLRLLLAGKIFKYLPEVLAAFRLG 196 (202)
T ss_pred cCcceEEEHHHHHHhCCCchhhC-c-hhhHHHHHHHHHcCCceEecchhhhhheec
Confidence 46678899999999999999986 3 489999999999999999999877765543
No 27
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=98.03 E-value=1.2e-05 Score=68.56 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=47.5
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeec
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIF 56 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~ 56 (131)
+|++.+++|+.++++||||+.+. .||+|+|+|+.+.|+++.++|++.+.+..
T Consensus 231 sG~~~~~rr~al~~vGg~~~~~i---~ED~dl~~rl~~~G~~i~~~p~a~~~~~~ 282 (444)
T PRK14583 231 SGVVAAFRRRALADVGYWSPDMI---TEDIDISWKLQLKHWSVFFEPRGLCWILM 282 (444)
T ss_pred cCceeEEEHHHHHHcCCCCCCcc---cccHHHHHHHHHcCCeEEEeeccEEeeeC
Confidence 58889999999999999999874 69999999999999999999998887754
No 28
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=98.03 E-value=9.1e-06 Score=61.56 Aligned_cols=50 Identities=18% Similarity=0.250 Sum_probs=44.2
Q ss_pred EEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeec
Q psy5324 6 FAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIF 56 (131)
Q Consensus 6 fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~ 56 (131)
++++|+.|+++||||+.+..+ +||.||.+|+.+.|+++..+|..-+.+..
T Consensus 161 ~~~rr~~~~~~g~f~~~~~~~-~eD~~l~~r~~~~g~~i~~~~~~~~~yr~ 210 (219)
T cd06913 161 WFCSREWFSHVGPFDEGGKGV-PEDLLFFYEHLRKGGGVYRVDRCLLLYRY 210 (219)
T ss_pred ceeehhHHhhcCCccchhccc-hhHHHHHHHHHHcCCceEEEcceeeeeee
Confidence 568999999999999997766 69999999999999999999987775544
No 29
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=97.96 E-value=1e-05 Score=67.80 Aligned_cols=51 Identities=18% Similarity=0.196 Sum_probs=45.4
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEE
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIG 53 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~ 53 (131)
.|++++++|+.|+++||||+-...+ .||++|+.|+.+.|+++.+.+...+.
T Consensus 210 ~G~~~lirr~~~~~vGGf~~~~~~~-~ED~~L~~r~~~~G~~v~~~~~~~~~ 260 (384)
T TIGR03469 210 AGGCILIRREALERIGGIAAIRGAL-IDDCTLAAAVKRSGGRIWLGLAARTR 260 (384)
T ss_pred cceEEEEEHHHHHHcCCHHHHhhCc-ccHHHHHHHHHHcCCcEEEEecCceE
Confidence 4899999999999999999977776 79999999999999999998765553
No 30
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=97.93 E-value=5.2e-06 Score=69.25 Aligned_cols=53 Identities=13% Similarity=0.101 Sum_probs=45.6
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEee
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHI 55 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi 55 (131)
.|++++++|+.|+++||||+-.... +||++|+.|+..+|+++.+.|+..+.+.
T Consensus 201 ~G~~~a~RR~~l~~iGGf~~~~~~~-~ED~~l~~~i~~~G~~v~~~~~~v~~~~ 253 (373)
T TIGR03472 201 FGATMALRRATLEAIGGLAALAHHL-ADDYWLGELVRALGLRVVLAPVVVDTDV 253 (373)
T ss_pred cChhhheeHHHHHHcCChHHhcccc-hHHHHHHHHHHHcCCeEEecchhhhcCC
Confidence 4788999999999999999866666 6999999999999999999987644433
No 31
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=97.78 E-value=1e-05 Score=59.88 Aligned_cols=49 Identities=12% Similarity=0.132 Sum_probs=42.9
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEE
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIG 53 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~ 53 (131)
.+++++++|+.|.++|+||+. .++||.++++|+...|+++.++|...+.
T Consensus 151 ~~~~~~~rr~~~~~~g~~~~~---~~~eD~~~~~r~~~~g~~~~~~~~~~~~ 199 (201)
T cd04195 151 NHPTVMFRKSKVLAVGGYQDL---PLVEDYALWARMLANGARFANLPEILVK 199 (201)
T ss_pred CChHHhhhHHHHHHcCCcCCC---CCchHHHHHHHHHHcCCceecccHHHhh
Confidence 356688999999999999976 4589999999999999999999987654
No 32
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=97.65 E-value=4.6e-05 Score=65.11 Aligned_cols=52 Identities=15% Similarity=0.228 Sum_probs=46.3
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHH-cCCeEEEeecceEEeec
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWM-CGGSLECVPCSRIGHIF 56 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~-~Gg~~~~~P~srV~Hi~ 56 (131)
+|++++++|+.+.++||||+... +||.|+++|+.. .|+++.+.|.+.+.|..
T Consensus 216 sGa~~~~Rr~~l~~vggf~~~~i---~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~ 268 (439)
T TIGR03111 216 SGAFSAFRRETILKTQLYNSETV---GEDTDMTFQIRELLDGKVYLCENAIFYVDP 268 (439)
T ss_pred ccHHHhhhHHHHHHhCCCCCCCc---CccHHHHHHHHHhcCCeEEECCCCEEEEEC
Confidence 67888999999999999998763 799999999985 69999999999998865
No 33
>KOG3588|consensus
Probab=97.62 E-value=5.8e-05 Score=65.16 Aligned_cols=56 Identities=21% Similarity=0.489 Sum_probs=51.7
Q ss_pred cEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCC
Q psy5324 4 GLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSH 59 (131)
Q Consensus 4 g~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~ 59 (131)
|.-.+-|+.|-.+||||....+|||||++|=-|+-..|-++.=+|..-+.|+++..
T Consensus 386 Gmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~H~~H~~ 441 (494)
T KOG3588|consen 386 GMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLFHLWHPK 441 (494)
T ss_pred ceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceEEeeccc
Confidence 45667899999999999999999999999999999999999999999999999765
No 34
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=97.59 E-value=7.8e-05 Score=55.85 Aligned_cols=53 Identities=21% Similarity=0.160 Sum_probs=42.5
Q ss_pred CCcEEEEehHHHHHhC-CCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 2 AGGLFAVDRKYFFELG-SYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lG-gfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
.|++++++|+.|+++| .+++.. + .+++||++|+|.+|+++..+|...+.|..-
T Consensus 152 ~~~~~~~~r~~~~~ig~~~~~~~--~-~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g 205 (224)
T cd06442 152 TSGFRAYRREVLEKLIDSLVSKG--Y-KFQLELLVRARRLGYRIVEVPITFVDREHG 205 (224)
T ss_pred CCccchhhHHHHHHHhhhccCCC--c-EEeHHHHHHHHHcCCeEEEeCeEEeccCCC
Confidence 5788999999999998 443321 2 347899999999999999999988876653
No 35
>KOG3916|consensus
Probab=97.48 E-value=8.2e-05 Score=63.21 Aligned_cols=54 Identities=24% Similarity=0.411 Sum_probs=46.5
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEE-----eecceEEee
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLEC-----VPCSRIGHI 55 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~-----~P~srV~Hi 55 (131)
-||+-|++++-|.+|.||--.|.+|||||=||.-|+-+.|.+|.= -.+.-+-|.
T Consensus 261 FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~ 319 (372)
T KOG3916|consen 261 FGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHH 319 (372)
T ss_pred hCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecc
Confidence 489999999999999999999999999999999999999998753 334444554
No 36
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=97.25 E-value=0.00046 Score=62.82 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=45.3
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEee
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHI 55 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi 55 (131)
.|.+++++|+.++++||||++.. .||+|+++|+...|+++.++|.+.+.+.
T Consensus 308 ~Gs~~~iRR~al~~iGGf~~~~v---tED~~l~~rL~~~G~~~~y~~~~~~~g~ 358 (713)
T TIGR03030 308 CGSAAVLRREALDEIGGIAGETV---TEDAETALKLHRRGWNSAYLDRPLIAGL 358 (713)
T ss_pred cCceeEEEHHHHHHcCCCCCCCc---CcHHHHHHHHHHcCCeEEEecccccccc
Confidence 47788999999999999998653 7999999999999999999998887654
No 37
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=97.23 E-value=0.00033 Score=53.26 Aligned_cols=50 Identities=18% Similarity=0.325 Sum_probs=43.6
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceE
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRI 52 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV 52 (131)
-|++++++|+.++++|||+.==... +||..|+-+++..|.++.+.|...+
T Consensus 102 ~G~~m~~rr~~L~~~GG~~~l~~~l-adD~~l~~~~~~~G~~v~~~~~~v~ 151 (175)
T PF13506_consen 102 WGGSMAFRREALEEIGGFEALADYL-ADDYALGRRLRARGYRVVLSPYPVV 151 (175)
T ss_pred ecceeeeEHHHHHHcccHHHHhhhh-hHHHHHHHHHHHCCCeEEEcchhee
Confidence 4899999999999999999744445 8999999999999999999996543
No 38
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=97.23 E-value=0.0017 Score=60.66 Aligned_cols=49 Identities=18% Similarity=0.208 Sum_probs=43.9
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEE
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIG 53 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~ 53 (131)
.|++++++|+.|+++||||++. . .||+|+++|+...|+++.++|...+.
T Consensus 419 ~Gs~aviRReaLeeVGGfd~~t--i-tED~dlslRL~~~Gyrv~yl~~~~a~ 467 (852)
T PRK11498 419 CGSCAVIRRKPLDEIGGIAVET--V-TEDAHTSLRLHRRGYTSAYMRIPQAA 467 (852)
T ss_pred ccceeeeEHHHHHHhcCCCCCc--c-CccHHHHHHHHHcCCEEEEEecccee
Confidence 4888999999999999999974 3 69999999999999999999876665
No 39
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=97.22 E-value=0.00029 Score=58.71 Aligned_cols=51 Identities=24% Similarity=0.534 Sum_probs=41.9
Q ss_pred CcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeec
Q psy5324 3 GGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIF 56 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~ 56 (131)
.+++.|+|..|-..|||||.|.++|.||+|+=.|+-+. +...|.-.--|.+
T Consensus 179 T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~---~~~~p~~~~nh~y 229 (346)
T COG4092 179 TNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY---IKNLPMLTKNHLY 229 (346)
T ss_pred cceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH---Hhccccccccccc
Confidence 57899999999999999999999999999999998664 4445544445555
No 40
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=97.16 E-value=0.00052 Score=53.24 Aligned_cols=54 Identities=20% Similarity=0.177 Sum_probs=45.1
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
.||+.+++|+.++++|.+++.- .| .+++||++|+...|.++..+|.+.+.|...
T Consensus 167 ~g~~~~~rr~~~~~i~~~~~~~-~~-~~~~el~~~~~~~g~~i~~vp~~~~~r~~g 220 (243)
T PLN02726 167 TGSFRLYKRSALEDLVSSVVSK-GY-VFQMEIIVRASRKGYRIEEVPITFVDRVYG 220 (243)
T ss_pred CCcccceeHHHHHHHHhhccCC-Cc-EEehHHHHHHHHcCCcEEEeCcEEeCCCCC
Confidence 5788999999999998766533 34 468999999999999999999988877654
No 41
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=97.15 E-value=0.00059 Score=53.74 Aligned_cols=52 Identities=13% Similarity=0.146 Sum_probs=32.2
Q ss_pred CCcEEEEehHHHHHhCCCccc-CcccccchhhhHHHHHHcCCeEEEeecceEEeeccC
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQ-MEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRS 58 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g-~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~ 58 (131)
-|.+|++.|+.+ +|||. +..|..-|+++|+++.+.|.++.+ +...+.|....
T Consensus 148 Dg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v~~-~~~~~~H~s~g 200 (217)
T PF13712_consen 148 DGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRVVV-PPPWCIHFSGG 200 (217)
T ss_dssp -TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EEEE------EE-S--
T ss_pred cceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEEEe-cCceEEEcCCC
Confidence 488999999999 99999 899999999999999999998854 55778887653
No 42
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=97.03 E-value=0.0011 Score=58.60 Aligned_cols=47 Identities=26% Similarity=0.262 Sum_probs=41.4
Q ss_pred CCcEEEEehHHHHHh-----CC-CcccCcccccchhhhHHHHHHcCCeEEEeecce
Q psy5324 2 AGGLFAVDRKYFFEL-----GS-YDQQMEVWGGENLEISFRVWMCGGSLECVPCSR 51 (131)
Q Consensus 2 ~Gg~fai~r~~F~~l-----Gg-fD~g~~~~GgEd~els~R~w~~Gg~~~~~P~sr 51 (131)
+|..++++|+.++++ |+ ||++.. .||+|+|+|+++.|.++.++|.+.
T Consensus 233 ~Gtg~afRR~aLe~l~~~~GG~~fd~~sL---TED~dLglRL~~~G~rv~y~p~ai 285 (504)
T PRK14716 233 AGVGTAFSRRALERLAAERGGQPFDSDSL---TEDYDIGLRLKRAGFRQIFVRVRA 285 (504)
T ss_pred CCeeEEeEHHHHHHHHhhcCCCCCCCCCc---chHHHHHHHHHHCCCEEEEecccc
Confidence 488899999999999 43 998854 799999999999999999999763
No 43
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.02 E-value=0.0012 Score=54.66 Aligned_cols=48 Identities=21% Similarity=0.337 Sum_probs=44.2
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceE
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRI 52 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV 52 (131)
.|++.+++|+.++++||+++... +||.++++|+...|+++.++|.+.+
T Consensus 215 ~G~~~~~rr~aL~~~g~~~~~~i---~ED~~lt~~l~~~G~~~~~~~~~~~ 262 (439)
T COG1215 215 SGSSSAFRRSALEEVGGWLEDTI---TEDADLTLRLHLRGYRVVYVPEAIV 262 (439)
T ss_pred cceeeeEEHHHHHHhCCCCCCce---eccHHHHHHHHHCCCeEEEeecceE
Confidence 68999999999999999998875 7999999999999999999998833
No 44
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=96.80 E-value=0.00075 Score=50.97 Aligned_cols=53 Identities=11% Similarity=0.015 Sum_probs=44.0
Q ss_pred CCcEEEEehHHHHHhCCCcccC--------cccccchhhhHHHHHHcCCeEEEeecceEEee
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQM--------EVWGGENLEISFRVWMCGGSLECVPCSRIGHI 55 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~--------~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi 55 (131)
+|++++++|+.++++| |++++ ..-.+||.+|+.|+...|+++.+.|+..+.|.
T Consensus 153 ~G~~~~~rr~~l~~~~-~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~ 213 (235)
T cd06434 153 SGRTAAYRTEILKDFL-FLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTE 213 (235)
T ss_pred cCcHHHHHHHHHhhhh-hHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEE
Confidence 5778889999999874 44444 23357999999999999999999999999887
No 45
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=96.62 E-value=0.0039 Score=50.04 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=40.7
Q ss_pred CcEEEEehHHHHHhCCCcc--cCcccc----cchhhhHHHHHHcCCeEEEeecce
Q psy5324 3 GGLFAVDRKYFFELGSYDQ--QMEVWG----GENLEISFRVWMCGGSLECVPCSR 51 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~--g~~~~G----gEd~els~R~w~~Gg~~~~~P~sr 51 (131)
|..++++|+.|.++|++.+ |+..|+ .||+++|+++...|+++.+.|...
T Consensus 173 G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~ 227 (254)
T cd04191 173 GHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLE 227 (254)
T ss_pred ceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCc
Confidence 6679999999999877753 444553 599999999999999999999754
No 46
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=96.62 E-value=0.0024 Score=49.90 Aligned_cols=55 Identities=11% Similarity=0.003 Sum_probs=44.5
Q ss_pred CCCcEEEEehHHHHHhCCCcccC------------------cccccchhhhHHHHHHcCCeEEE--eecceEEeec
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQM------------------EVWGGENLEISFRVWMCGGSLEC--VPCSRIGHIF 56 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~------------------~~~GgEd~els~R~w~~Gg~~~~--~P~srV~Hi~ 56 (131)
++|++++++++.+.++|++...+ ... +||.||++|+...|.++.+ +|.+.+....
T Consensus 149 ~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ED~~l~~~l~~~G~~~~~~~~~~a~~~~~~ 223 (244)
T cd04190 149 LPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDL-GEDRILCTLLLKAGPKRKYLYVPGAVAETDV 223 (244)
T ss_pred CCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhH-hcccceeHHHhccCCccEEEEecccEEEEEC
Confidence 46889999999999998775421 123 7999999999999999999 8988885544
No 47
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=96.22 E-value=0.0039 Score=47.72 Aligned_cols=50 Identities=14% Similarity=0.192 Sum_probs=41.9
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
.|++++++|+.|+ +|++. .+.||.+++.|+...|.++.++|++.+.|...
T Consensus 182 ~g~~~~~rr~~~~---~~~~~---~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~ 231 (251)
T cd06439 182 NGAIYAIRRELFR---PLPAD---TINDDFVLPLRIARQGYRVVYEPDAVAYEEVA 231 (251)
T ss_pred cchHHHhHHHHhc---CCCcc---cchhHHHHHHHHHHcCCeEEeccccEEEEeCc
Confidence 4777889999888 56543 23799999999999999999999999988764
No 48
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.18 E-value=0.0059 Score=44.93 Aligned_cols=49 Identities=12% Similarity=0.005 Sum_probs=42.5
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEE
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIG 53 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~ 53 (131)
.|++++++|+.+.++|+|++.+ .+ .||.++.+++.. ||++.++|...+.
T Consensus 153 ~~~~~~~r~~~~~~~~~~~~~~-~~-~~D~~~~~~~~~-~~~~~~~~~~~~~ 201 (214)
T cd04196 153 TGCTMAFNRELLELALPFPDAD-VI-MHDWWLALLASA-FGKVVFLDEPLIL 201 (214)
T ss_pred CCceeeEEHHHHHhhccccccc-cc-cchHHHHHHHHH-cCceEEcchhHHH
Confidence 5788999999999999999887 34 799999999888 8899999987663
No 49
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=96.15 E-value=0.011 Score=52.03 Aligned_cols=56 Identities=16% Similarity=0.414 Sum_probs=50.6
Q ss_pred cEEEEehHHHHHh--CCCcccCcccccchhhhHHHHHHcC--CeEEEeecceEEeeccCC
Q psy5324 4 GLFAVDRKYFFEL--GSYDQQMEVWGGENLEISFRVWMCG--GSLECVPCSRIGHIFRSH 59 (131)
Q Consensus 4 g~fai~r~~F~~l--GgfD~g~~~~GgEd~els~R~w~~G--g~~~~~P~srV~Hi~r~~ 59 (131)
|.+++-++.|.++ ||||.....||+||+||--++=..| -.++=+|+.-..|+|+..
T Consensus 412 g~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~L~h~yh~~ 471 (499)
T PF05679_consen 412 GMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPGLVHRYHPK 471 (499)
T ss_pred ceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCCeEEEeccc
Confidence 6788999999999 9999999999999999999999999 677778888899998764
No 50
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=94.22 E-value=0.043 Score=36.79 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=31.3
Q ss_pred cEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCC
Q psy5324 4 GLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGG 42 (131)
Q Consensus 4 g~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg 42 (131)
++++++++.|.++|++++....+ +||.+++.++-..|.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~-~ed~~~~~~~~~~g~ 152 (156)
T cd00761 115 GNLLFRRELLEEIGGFDEALLSG-EEDDDFLLRLLRGGK 152 (156)
T ss_pred chheeeHHHHHHhCCcchHhcCC-cchHHHHHHHHhhcc
Confidence 56899999999999999998776 899999966554443
No 51
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=93.87 E-value=0.084 Score=39.51 Aligned_cols=46 Identities=22% Similarity=0.212 Sum_probs=37.1
Q ss_pred cEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecce
Q psy5324 4 GLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSR 51 (131)
Q Consensus 4 g~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~sr 51 (131)
|..+++|+...++++.. ....| ++|+|+++|++..|.++..+|.+-
T Consensus 159 g~~~~~r~~~~~~~~~~-~~~~~-~~d~el~~r~~~~g~~~~~vpi~~ 204 (211)
T cd04188 159 GFKLFTRDAARRLFPRL-HLERW-AFDVELLVLARRLGYPIEEVPVRW 204 (211)
T ss_pred CceeEcHHHHHHHHhhh-hccce-EeeHHHHHHHHHcCCeEEEcCcce
Confidence 55789999999997543 33457 479999999999999999999543
No 52
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=93.52 E-value=0.11 Score=48.06 Aligned_cols=45 Identities=29% Similarity=0.264 Sum_probs=38.3
Q ss_pred CCcEEEE-eh--HHHHHhC---CCcccCcccccchhhhHHHHHHcCCeEEEeec
Q psy5324 2 AGGLFAV-DR--KYFFELG---SYDQQMEVWGGENLEISFRVWMCGGSLECVPC 49 (131)
Q Consensus 2 ~Gg~fai-~r--~~F~~lG---gfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~ 49 (131)
+|..+++ +| +...++| +||+++. .||+|+|+|+.+.|.++.+.|.
T Consensus 230 ~G~~~af~Rr~l~al~~~ggg~~~~~~~l---TED~dlg~rL~~~G~~v~f~~~ 280 (727)
T PRK11234 230 AGVGTCFSRRAVTALLEDGDGIAFDVQSL---TEDYDIGFRLKEKGMREIFVRF 280 (727)
T ss_pred CCceEEEecccHHHHHHhcCCCCcCCCcc---hHHHHHHHHHHHCCCEEEEccc
Confidence 5777999 45 3578888 6999887 7999999999999999999993
No 53
>PRK10018 putative glycosyl transferase; Provisional
Probab=92.19 E-value=0.5 Score=38.44 Aligned_cols=50 Identities=20% Similarity=0.185 Sum_probs=37.5
Q ss_pred CcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecc-eEEee
Q psy5324 3 GGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCS-RIGHI 55 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~s-rV~Hi 55 (131)
|...++.+..+ ..|+|||.+. .+||.||.+|+...|+.+..+|.+ .+.|+
T Consensus 157 g~~~~~~~~~~-~~~~fd~~~~--~~eDydlwlrl~~~~~~~~~~~~~l~~y~~ 207 (279)
T PRK10018 157 GNQVFTWAWRF-KECLFDTELK--AAQDYDIFLRMVVEYGEPWKVEEATQILHI 207 (279)
T ss_pred Cceeeehhhhh-hhcccCCCCC--ccccHHHHHHHHHhcCceEeeccceEEEEc
Confidence 44444444444 4578999976 369999999999999999999987 55555
No 54
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=91.94 E-value=0.2 Score=42.49 Aligned_cols=56 Identities=20% Similarity=0.348 Sum_probs=43.9
Q ss_pred CCcEEEEehHHHHHhCCCcccC--cccccchhhhHHHHHHcCCeEEEeecceEEeeccCC
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQM--EVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSH 59 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~--~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~ 59 (131)
++|++..+.+ |.+-=-|||.+ .-. ||++-+|.|+|-.|+.+..-+.+.+.|.|...
T Consensus 209 aaGF~Fa~~~-~~~eVP~DP~lp~lF~-GEE~~~aaRlwT~GYD~Y~P~~~v~~H~Y~r~ 266 (343)
T PF11397_consen 209 AAGFSFAPGH-FVREVPYDPHLPFLFD-GEEISMAARLWTHGYDFYSPTRNVLFHLYSRS 266 (343)
T ss_pred cccEEEcchh-heecCCCCCCcccccc-cHHHHHHHHHHHcCCccccCCCceeEEEccCC
Confidence 4554444444 44444799998 445 89999999999999999999999999999853
No 55
>KOG3917|consensus
Probab=91.56 E-value=0.16 Score=41.84 Aligned_cols=44 Identities=25% Similarity=0.400 Sum_probs=40.9
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEE
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLE 45 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~ 45 (131)
-||++.++++-|.++.|....+-+||-||-|+=.|+--+|-++.
T Consensus 182 vGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLqlt 225 (310)
T KOG3917|consen 182 VGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQLT 225 (310)
T ss_pred cceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceEe
Confidence 49999999999999999999999999999999999998887754
No 56
>PRK10063 putative glycosyl transferase; Provisional
Probab=89.18 E-value=0.83 Score=36.14 Aligned_cols=48 Identities=10% Similarity=0.026 Sum_probs=38.3
Q ss_pred CcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEE
Q psy5324 3 GGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIG 53 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~ 53 (131)
+....++++.|. .|+||+.+. + .||.|+-+|++..|..+..+|+.-+.
T Consensus 147 ~~~~~~~~~~~~-~~~fd~~~~-~-~~Dydl~lrl~~~g~~~~~v~~~l~~ 194 (248)
T PRK10063 147 HQAIFFPVSGLK-KWRYDLQYK-V-SSDYALAARLYKAGYAFKKLNGLVSE 194 (248)
T ss_pred CcEEEEEHHHHh-cCCCCcccc-h-HHhHHHHHHHHHcCCcEEEcCceeEE
Confidence 344567788776 578999875 3 69999999999999999999976554
No 57
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=87.02 E-value=0.95 Score=41.96 Aligned_cols=42 Identities=21% Similarity=0.241 Sum_probs=34.9
Q ss_pred CCcEEEEehHHHHHh---CC---CcccCcccccchhhhHHHHHHcCCeEEE
Q psy5324 2 AGGLFAVDRKYFFEL---GS---YDQQMEVWGGENLEISFRVWMCGGSLEC 46 (131)
Q Consensus 2 ~Gg~fai~r~~F~~l---Gg---fD~g~~~~GgEd~els~R~w~~Gg~~~~ 46 (131)
+|...+++|+...++ || ||.+.. -||.|+|+|+.+.|.+..+
T Consensus 238 ~Gv~~~frr~aL~~l~~~gg~~~~n~~sL---TED~Dlg~RL~~~G~r~~f 285 (703)
T PRK15489 238 AGVGTCFSRRALLALMKERGNQPFNTSSL---TEDYDFSFRLAELGMQEIF 285 (703)
T ss_pred cCcceeeeHHHHHHHHHhcCCCCCCCCCc---hHhHHHHHHHHHCCCceEE
Confidence 566788999998887 64 655554 5999999999999999988
No 58
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=85.68 E-value=1.6 Score=40.27 Aligned_cols=48 Identities=17% Similarity=0.093 Sum_probs=38.9
Q ss_pred CcEEEEehHHHHHhCCCcc--cCccccc----chhhhHHHHHHcCCeEEEeecc
Q psy5324 3 GGLFAVDRKYFFELGSYDQ--QMEVWGG----ENLEISFRVWMCGGSLECVPCS 50 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~--g~~~~Gg----Ed~els~R~w~~Gg~~~~~P~s 50 (131)
|-..+++++.|.+.||... |...||+ ||++++.++...|+++.++|..
T Consensus 298 G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~ 351 (691)
T PRK05454 298 GHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDL 351 (691)
T ss_pred cceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc
Confidence 3447899999999988643 4555554 5999999999999999999984
No 59
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=83.58 E-value=1.7 Score=36.22 Aligned_cols=43 Identities=14% Similarity=0.282 Sum_probs=39.1
Q ss_pred HhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 15 ELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 15 ~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
..=.|||.|..||...+-...-+...|+++.++|.+-+.|...
T Consensus 242 ~~P~yDErF~~yg~nk~s~~~eL~~~gy~F~VL~~aFlVH~~h 284 (317)
T PF13896_consen 242 NVPLYDERFRGYGFNKISQIYELCAAGYRFHVLPNAFLVHRPH 284 (317)
T ss_pred CCCCCcccccccccchHHHHHHHHHcCCEEEEcCCeeEEecCC
Confidence 4456999999999999999999999999999999999999854
No 60
>PRK10073 putative glycosyl transferase; Provisional
Probab=79.85 E-value=6 Score=32.63 Aligned_cols=43 Identities=7% Similarity=0.138 Sum_probs=35.6
Q ss_pred EEehHHHHHhC-CCcccCcccccchhhhHHHHHHcCCeEEEeecceE
Q psy5324 7 AVDRKYFFELG-SYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRI 52 (131)
Q Consensus 7 ai~r~~F~~lG-gfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV 52 (131)
+++|+++.+.| .|++++. .||+++.+++.+.+.++.++|..-.
T Consensus 170 l~Rr~~l~~~~~~f~~~~~---~eD~~~~~~~~~~~~~v~~~~~~ly 213 (328)
T PRK10073 170 VYRRDFIVKNNIKFEPGLH---HQDIPWTTEVMFNALRVRYTEQSLY 213 (328)
T ss_pred HHHHHHHHHcCCccCCCCE---eccHHHHHHHHHHCCEEEEECCCEE
Confidence 46788888887 4778874 5999999999999999999996544
No 61
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=38.50 E-value=20 Score=29.39 Aligned_cols=41 Identities=20% Similarity=0.306 Sum_probs=30.6
Q ss_pred CcEEEEehHHHHHhCCCcccCcccccchhhhHHHHH-HcCC-eEEEee
Q psy5324 3 GGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVW-MCGG-SLECVP 48 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w-~~Gg-~~~~~P 48 (131)
+|.+|++|+.++++. |+++ | |.++++-..+. .+|. .+..++
T Consensus 196 sG~~a~rr~~l~~l~-~~~~---y-g~e~~~l~~~~~~~g~~~i~~V~ 238 (306)
T PRK13915 196 GGEYAGRRELLESLP-FVPG---Y-GVEIGLLIDTLDRLGLDAIAQVD 238 (306)
T ss_pred hHhHHHHHHHHHhCC-CCCC---C-eehHHHHHHHHHHhCcCceEEEE
Confidence 456899999999985 7755 6 46888999887 4675 555555
No 62
>PF08260 Kinin: Insect kinin peptide; InterPro: IPR013202 This entry represents neuropeptides that are the first members of the insect kinin-family isolated from the American cockroach. Their occurrence in the retrocerebral complex suggests a physiological role as a neurohormone. The C-terminal sequence Phe-X-Ser-Trp-Gly-NH2 characterised the peptides as members of the insect kinin family. Data suggest a possible involvement of insect kinins in water-balance by regulating the osmoregulation. Insect kinins also mediate visceral muscle contractile activity (myotropic activity) []. These peptides have lengths ranging from 6 to 14 amino acids [].
Probab=37.43 E-value=16 Score=14.83 Aligned_cols=8 Identities=38% Similarity=1.107 Sum_probs=5.5
Q ss_pred cccCcccc
Q psy5324 20 DQQMEVWG 27 (131)
Q Consensus 20 D~g~~~~G 27 (131)
||.|..||
T Consensus 1 ~pafnswg 8 (8)
T PF08260_consen 1 DPAFNSWG 8 (8)
T ss_pred CccccccC
Confidence 56777775
No 63
>KOG2416|consensus
Probab=27.06 E-value=14 Score=34.17 Aligned_cols=49 Identities=27% Similarity=0.350 Sum_probs=38.4
Q ss_pred ecceEEeeccCCCCCcCCCCCCcccchhHHHHHHHHhhhhhHHHhcccc
Q psy5324 48 PCSRIGHIFRSHHPYTFPGGKDTHGINTARLVEIWMDDYKRLFYAHRRD 96 (131)
Q Consensus 48 P~srV~Hi~r~~~Py~~~~~~~~~~~N~~R~aevW~de~k~~fy~~~p~ 96 (131)
+-|.|.||-..--||+..+....+.+|---|.+.|||--|.+-|-..+.
T Consensus 442 ~~SnvlhI~nLvRPFTlgQLkelL~rtgg~Vee~WmDkIKShCyV~yss 490 (718)
T KOG2416|consen 442 EPSNVLHIDNLVRPFTLGQLKELLGRTGGNVEEFWMDKIKSHCYVSYSS 490 (718)
T ss_pred CccceEeeecccccchHHHHHHHHhhccCchHHHHHHHhhcceeEeccc
Confidence 4578999988888988765556677788888999999999887766553
No 64
>PF10664 NdhM: Cyanobacterial and plastid NDH-1 subunit M; InterPro: IPR018922 The NADH dehydrogenase I complex shuttles electrons from an unknown electron donor, via FMN and iron-sulphur (Fe-S) centres, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in plants is believed to be plastoquinone. The NADH dehydrogenase I complex couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. This entry represents subunit M of the NADH dehydrogenase I complex in cyanobacteria and plant chloroplasts []. ; GO: 0016655 oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor, 0055114 oxidation-reduction process
Probab=22.18 E-value=77 Score=22.90 Aligned_cols=27 Identities=26% Similarity=0.309 Sum_probs=23.9
Q ss_pred cchhhhHHHHHHcCCeEEEeecceEEe
Q psy5324 28 GENLEISFRVWMCGGSLECVPCSRIGH 54 (131)
Q Consensus 28 gEd~els~R~w~~Gg~~~~~P~srV~H 54 (131)
|.|+|-.+|--+.-|.+.+-|.+||.-
T Consensus 72 GSdLE~~iR~LLq~GeisYNl~~RVlN 98 (108)
T PF10664_consen 72 GSDLEHFIRSLLQAGEISYNLDSRVLN 98 (108)
T ss_pred ccHHHHHHHHHHHCCceeeCCCcceec
Confidence 567888999999999999999999964
No 65
>KOG2288|consensus
Probab=21.80 E-value=41 Score=28.09 Aligned_cols=46 Identities=22% Similarity=0.398 Sum_probs=32.9
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeec
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPC 49 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~ 49 (131)
.|+..||+++.-.-|----.-+..|+-||+ |+-.|+.|-.+..+-.
T Consensus 175 ~G~~YvlS~dLa~yi~in~~lL~~y~nEDV--SlGaW~~gldV~h~dd 220 (274)
T KOG2288|consen 175 TGGGYVLSKDLATYISINRQLLHKYANEDV--SLGAWMIGLDVEHVDD 220 (274)
T ss_pred cCceEEeeHHHHHHHHHhHHHHHhhccCCc--ccceeeeeeeeeEecC
Confidence 488999999887655444344777977765 6678999988766543
No 66
>PF03385 DUF288: Protein of unknown function, DUF288; InterPro: IPR005049 This is a protein family of unknown function.
Probab=21.48 E-value=80 Score=27.64 Aligned_cols=25 Identities=36% Similarity=0.800 Sum_probs=20.7
Q ss_pred HHHcCCeEEEeecceEEeeccCCCCCc
Q psy5324 37 VWMCGGSLECVPCSRIGHIFRSHHPYT 63 (131)
Q Consensus 37 ~w~~Gg~~~~~P~srV~Hi~r~~~Py~ 63 (131)
+|.+|+.+.++|-. .|.+|..|.|.
T Consensus 15 LW~~G~~VsF~Ppn--V~Q~RNaHdYL 39 (390)
T PF03385_consen 15 LWLSGGTVSFVPPN--VVQFRNAHDYL 39 (390)
T ss_pred HHHcCCeEEEcCCc--eeecccccccc
Confidence 69999999999954 56788888763
Done!