Query psy5324
Match_columns 131
No_of_seqs 131 out of 503
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 23:43:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5324.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5324hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ffu_A Ppgalnact-2, polypeptid 99.9 2.6E-28 8.8E-33 205.8 8.6 129 1-129 236-383 (501)
2 1xhb_A Polypeptide N-acetylgal 99.9 2.5E-28 8.6E-33 203.5 7.0 129 1-130 204-351 (472)
3 2d7i_A Polypeptide N-acetylgal 99.9 7.3E-28 2.5E-32 207.8 8.1 128 1-129 284-433 (570)
4 2z86_A Chondroitin synthase; G 99.2 3.1E-11 1.1E-15 103.3 6.8 59 1-59 276-334 (625)
5 2fy7_A Beta-1,4-galactosyltran 99.0 5.9E-11 2E-15 95.4 2.9 55 2-56 175-234 (287)
6 4fix_A UDP-galactofuranosyl tr 98.9 2.2E-09 7.6E-14 94.8 6.8 82 2-85 366-447 (657)
7 2nxv_A ATP synthase subunits r 98.7 9.5E-09 3.3E-13 79.3 5.1 52 2-57 154-205 (249)
8 3lw6_A FI08434P, beta-4-galact 98.6 2.1E-08 7.1E-13 81.7 4.2 48 2-49 159-206 (287)
9 3bcv_A Putative glycosyltransf 98.6 3E-08 1E-12 73.8 4.0 48 2-50 172-220 (240)
10 2z86_A Chondroitin synthase; G 98.0 3.7E-06 1.3E-10 71.8 4.1 51 2-55 522-572 (625)
11 1qg8_A Protein (spore coat pol 97.8 8.6E-06 2.9E-10 61.0 3.0 53 2-57 157-216 (255)
12 4hg6_A Cellulose synthase subu 97.8 6.7E-05 2.3E-09 67.2 8.2 81 2-97 318-398 (802)
13 3l7i_A Teichoic acid biosynthe 96.8 0.00017 6E-09 63.2 0.0 53 2-56 153-206 (729)
14 3a21_A Putative secreted alpha 96.5 1.9E-05 6.3E-10 69.0 -8.7 55 73-129 423-494 (614)
15 3ckj_A Putative uncharacterize 95.8 0.0075 2.6E-07 47.8 3.9 48 2-54 214-263 (329)
16 3f1y_A Mannosyl-3-phosphoglyce 90.2 0.16 5.5E-06 41.8 2.9 47 3-54 260-308 (387)
17 2bo4_A Mannosylglycerate synth 62.3 6.2 0.00021 32.6 3.6 47 3-50 164-212 (397)
18 2c0n_A A197; thermophil protei 59.8 3.3 0.00011 32.0 1.4 53 2-56 117-184 (203)
No 1
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.95 E-value=2.6e-28 Score=205.78 Aligned_cols=129 Identities=52% Similarity=0.989 Sum_probs=111.4
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCCCCcCCCCC-CcccchhHHHH
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHHPYTFPGGK-DTHGINTARLV 79 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~Py~~~~~~-~~~~~N~~R~a 79 (131)
++|++++|+|++|+++|+||++|.+||+||+|||+|+|+||+++.++||++|.|++|..+||.++... ....+|..|++
T Consensus 236 ~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~~~n~~r~~ 315 (501)
T 2ffu_A 236 IAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAA 315 (501)
T ss_dssp CCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCTTCHHHHHHHHHHHHH
T ss_pred ccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEccCcCCCcCCccchhHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999987432 33468999999
Q ss_pred HHHHhhhhhHHHhccccchhh----cc----cccc----------CCCCCCccccCcCCccccccccC
Q psy5324 80 EIWMDDYKRLFYAHRRDLVDK----IR----PRRE----------SNPRPSAYKADALPTKLTRLTSL 129 (131)
Q Consensus 80 evW~de~k~~fy~~~p~~~~~----i~----~R~~----------~~~~P~~~~~~~~p~~~~~~~~~ 129 (131)
++|||+|+++||.++|.+++. ++ .|+. .|++|++.+|+..|.++|+|+|.
T Consensus 316 ~~w~d~~~~~~y~~~p~~~~~~~g~~~~r~~lr~~l~c~~f~w~l~~v~p~~~~p~~~~~~~g~i~~~ 383 (501)
T 2ffu_A 316 EVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQQG 383 (501)
T ss_dssp HHHCGGGHHHHHHHCGGGGGCCCCCCHHHHHHHHHTTCCCHHHHHHHTCTTSCCCCCCCCCEEEEEET
T ss_pred HHHHHHHHHHHhhcCcccccCCccchHHHHHHHHhcCCCCeEEehhcccccccccccccccccccccc
Confidence 999999999999999987643 33 3333 45567777888888889999874
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.95 E-value=2.5e-28 Score=203.51 Aligned_cols=129 Identities=47% Similarity=0.961 Sum_probs=98.4
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCCCCcCCCC-CCcccchhHHHH
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHHPYTFPGG-KDTHGINTARLV 79 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~Py~~~~~-~~~~~~N~~R~a 79 (131)
++|++|+|+|+.|+++|||||+|.+||+||+|||+|+|+||+++.++|+++|.|+++..+||..+.. ...+.+|.+|++
T Consensus 204 ~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~ 283 (472)
T 1xhb_A 204 MAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLA 283 (472)
T ss_dssp CCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC------------CHHHHHHHHHHH
T ss_pred ccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCcCCCCCCcchhhHHHHHHHHHH
Confidence 4699999999999999999999999999999999999999999999999999999999999987643 235789999999
Q ss_pred HHHHhhhhhHHHhccccchhh--------ccccccCCC----------CCCccccCcCCccccccccCC
Q psy5324 80 EIWMDDYKRLFYAHRRDLVDK--------IRPRRESNP----------RPSAYKADALPTKLTRLTSLD 130 (131)
Q Consensus 80 evW~de~k~~fy~~~p~~~~~--------i~~R~~~~~----------~P~~~~~~~~p~~~~~~~~~~ 130 (131)
++|||+|+++||.++|.++.+ ...|+.++| +|++++|+. +.+.|.|+|.+
T Consensus 284 ~~W~d~~~~~~~~~~p~~~~~~~g~~~~~~~lr~~l~~~~f~w~l~~v~p~~~~p~~-~~~~g~i~~~~ 351 (472)
T 1xhb_A 284 EVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPDSQIPRH-YFSLGEIRNVE 351 (472)
T ss_dssp HHHCGGGGHHHHHTSTTGGGSCCCCCHHHHHHHHHTTCCCHHHHHHHTCTTCSSCSS-EEEEECEEETT
T ss_pred HHHHHHHHHHHHhhCcccccCCCCCHHHHHHHHHhcCCCCccchhhhhhhhhccccc-ccccceEEECC
Confidence 999999999999999977432 223334444 556656654 34678888753
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.94 E-value=7.3e-28 Score=207.76 Aligned_cols=128 Identities=45% Similarity=0.911 Sum_probs=107.7
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCCCCcCCCCCCcccchhHHHHH
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHHPYTFPGGKDTHGINTARLVE 80 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~Py~~~~~~~~~~~N~~R~ae 80 (131)
++|++++|+|++|+++||||++|.+||+||+|||+|+|+||+++.++||++|.|++|...||+.+.. ..+.+|.+|+++
T Consensus 284 ~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~-~~~~~n~~r~~~ 362 (570)
T 2d7i_A 284 MAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAG-VSLARNLKRVAE 362 (570)
T ss_dssp CCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCCSS-CCHHHHHHHHHH
T ss_pred ccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEccccCCCCCCch-hhhHHHHHHHHH
Confidence 4699999999999999999999999999999999999999999999999999999999899987754 667899999999
Q ss_pred HHHhhhhhHHHhccccchhh----cc----ccccCCCCCCcc-----ccCc---------CCccccccccC
Q psy5324 81 IWMDDYKRLFYAHRRDLVDK----IR----PRRESNPRPSAY-----KADA---------LPTKLTRLTSL 129 (131)
Q Consensus 81 vW~de~k~~fy~~~p~~~~~----i~----~R~~~~~~P~~~-----~~~~---------~p~~~~~~~~~ 129 (131)
+|||+|+++||+++|.++.+ ++ .|+.++|++|.| +||+ .|.++|.|+|.
T Consensus 363 ~W~d~~~~~~y~~~p~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~~~~~~~~p~~~~~~~~~G~irn~ 433 (570)
T 2d7i_A 363 VWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNV 433 (570)
T ss_dssp HHCGGGHHHHHTTCGGGTTSCCCCCHHHHHHHHHHTCCCHHHHHHHTSTTHHHHSCSSCCCCSEEEEEEET
T ss_pred HHHHHHHHHHHhcCcccccCCccchHHHHHHHHHcCCCCcHHHHHHhhhhcccccCcccccccccceeeec
Confidence 99999999999999977542 33 333456655555 3332 34567899884
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.17 E-value=3.1e-11 Score=103.30 Aligned_cols=59 Identities=27% Similarity=0.535 Sum_probs=55.3
Q ss_pred CCCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCC
Q psy5324 1 MAGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSH 59 (131)
Q Consensus 1 m~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~ 59 (131)
+.|++++++|+.|+++||||+.+..||+||.||++|++.+|+++.++|++.|.|..+..
T Consensus 276 ~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~~~~ 334 (625)
T 2z86_A 276 FSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPG 334 (625)
T ss_dssp CCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGGGCEEEECCC-
T ss_pred EeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcccchhhccCCcc
Confidence 36899999999999999999999999999999999999999999999999999997653
No 5
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.05 E-value=5.9e-11 Score=95.37 Aligned_cols=55 Identities=25% Similarity=0.425 Sum_probs=46.8
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEE-----EeecceEEeec
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLE-----CVPCSRIGHIF 56 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~-----~~P~srV~Hi~ 56 (131)
.||+++++|+.|.++||||+.|..||+||.||++|++..|.++. +.+.+.+.|..
T Consensus 175 ~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~ 234 (287)
T 2fy7_A 175 FGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSR 234 (287)
T ss_dssp CCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---
T ss_pred eeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCC
Confidence 58999999999999999999999999999999999999999998 44555554443
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.88 E-value=2.2e-09 Score=94.80 Aligned_cols=82 Identities=16% Similarity=0.033 Sum_probs=62.7
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCCCCcCCCCCCcccchhHHHHHH
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHHPYTFPGGKDTHGINTARLVEI 81 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~Py~~~~~~~~~~~N~~R~aev 81 (131)
+|++++|+|+.|+++|+|| .++++ +||+|+|+|++..|+++.++|.+.|.|......+-..+-......||.+.++..
T Consensus 366 ~g~~~lirr~v~~~vGgfd-~~F~~-~ED~Dl~lR~~~~G~ki~~~p~a~V~H~~~~~~~~~s~~r~Yy~~RN~l~~~~k 443 (657)
T 4fix_A 366 GWWTCMIPRQVAEELGQPL-PLFIK-WDDADYGLRAAEHGYPTVTLPGAAIWHMAWSDKDDAIDWQAYFHLRNRLVVAAM 443 (657)
T ss_dssp CTTEEEEEHHHHHHHCSCC-SCSSS-SHHHHHHHHHHHTTCCEEEEEEEEEEECCSSSSCCTTSTHHHHHHHHHHHHHHH
T ss_pred chhHhHhhHHHHHHhCCCh-hHhcc-CcHHHHHHHHHHcCCeEEEECCEEEEEcCcCccccccHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999 57777 499999999999999999999999999653322111111123356788888777
Q ss_pred HHhh
Q psy5324 82 WMDD 85 (131)
Q Consensus 82 W~de 85 (131)
+...
T Consensus 444 ~~~~ 447 (657)
T 4fix_A 444 HWDG 447 (657)
T ss_dssp HCCS
T ss_pred hCCc
Confidence 6543
No 7
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=98.73 E-value=9.5e-09 Score=79.29 Aligned_cols=52 Identities=12% Similarity=0.082 Sum_probs=46.2
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
+|++|+++|+. +|||||.+..|..||+|+|+|+++.|.++.++|. .|.|..+
T Consensus 154 ~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~-~v~H~~~ 205 (249)
T 2nxv_A 154 DECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDF-HLHHYGR 205 (249)
T ss_dssp CTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCC-CCEECCC
T ss_pred eeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEecc-EEEECCC
Confidence 58999999999 8899998888888999999999999999999985 5888653
No 8
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=98.62 E-value=2.1e-08 Score=81.72 Aligned_cols=48 Identities=25% Similarity=0.352 Sum_probs=44.6
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeec
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPC 49 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~ 49 (131)
-||+++++|+.|.++||||+.|.+||+||.||..|++..|.++.-.+.
T Consensus 159 ~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~ 206 (287)
T 3lw6_A 159 VGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQN 206 (287)
T ss_dssp CCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSS
T ss_pred cccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCC
Confidence 499999999999999999999999999999999999999998876543
No 9
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.59 E-value=3e-08 Score=73.76 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=42.7
Q ss_pred CCcEEEEehHHHHHhC-CCcccCcccccchhhhHHHHHHcCCeEEEeecc
Q psy5324 2 AGGLFAVDRKYFFELG-SYDQQMEVWGGENLEISFRVWMCGGSLECVPCS 50 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lG-gfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~s 50 (131)
+|++++++|+.|+++| +||+++..+ +||+||++|++..|+++.++|..
T Consensus 172 ~~~~~~~rr~~~~~~g~~f~~~~~~~-~eD~~~~~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 172 SAKVVLYRRNLIEKKHLRFVSERILP-SEDLIFNVDVLANSNIVCVLPQT 220 (240)
T ss_dssp TCSCEEEEHHHHHHTTCCCCCTTTCT-THHHHHHHHHHTTCSCEEECC--
T ss_pred chhheeeeHHHHHHcCCccCCCCCcc-CCCHHHHHHHHHhCCEEEEECCC
Confidence 4678999999999999 999998766 59999999999999999999987
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.00 E-value=3.7e-06 Score=71.83 Aligned_cols=51 Identities=2% Similarity=0.114 Sum_probs=44.4
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEee
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHI 55 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi 55 (131)
.|++++++|+.|+++||||+.+. ++||.||++|++.+| ++.++|...+.|.
T Consensus 522 ~~~~~~~~r~~~~~~ggfd~~~~--~~eD~dl~~r~~~~g-~~~~~~~~~~~~r 572 (625)
T 2z86_A 522 CHHFRMFTARAWNLTEGFNESIS--NAVDYDMYLKLSEVG-PFKHINKICYNRV 572 (625)
T ss_dssp CCSCEEEEHHHHTTTTCCCSSCS--SCHHHHHHHHHTTTS-CEEEEEEEEEEEE
T ss_pred CCceEEEEHHHHHHhCCCCCccC--ChHHHHHHHHHHHhC-CEEEeCCcEEEEE
Confidence 57788999999999999999997 369999999999998 9999997655433
No 11
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=97.83 E-value=8.6e-06 Score=60.96 Aligned_cols=53 Identities=4% Similarity=-0.119 Sum_probs=45.0
Q ss_pred CCcEEEEehHHHHHhC-CC------cccCcccccchhhhHHHHHHcCCeEEEeecceEEeecc
Q psy5324 2 AGGLFAVDRKYFFELG-SY------DQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFR 57 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lG-gf------D~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r 57 (131)
.|++++++|+.|+++| +| |+.+ +++||.|+++|+...| ++.++|...+.|..+
T Consensus 157 ~~~~~~~rr~~~~~~g~~f~~~~~~~~~~--~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~ 216 (255)
T 1qg8_A 157 DHCSVMHRYSVLEKVKEKFGSYWDESPAF--YRIGDARFFWRVNHFY-PFYPLDEELDLNYIT 216 (255)
T ss_dssp CGGGEEEETHHHHHHHHHHSSSSCCCGGG--STTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC
T ss_pred ccceEEEEHHHHHhhcccccccccCCccc--chHHHHHHHHHHHHhC-CEEEecCcEEEEEEc
Confidence 5788999999999999 89 6665 4579999999999885 799999888877654
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=97.76 E-value=6.7e-05 Score=67.20 Aligned_cols=81 Identities=11% Similarity=0.124 Sum_probs=60.1
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeeccCCCCCcCCCCCCcccchhHHHHHH
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIFRSHHPYTFPGGKDTHGINTARLVEI 81 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~r~~~Py~~~~~~~~~~~N~~R~aev 81 (131)
.|++++++|+.|+++||||+... +||.|+++|++..|+++.++|.+.+.|.... -.+...+--..
T Consensus 318 ~G~~~~~Rr~al~~vGgf~~~~~---~ED~~l~~rl~~~G~ri~~~~~~~~~~~~p~------------t~~~~~~Qr~R 382 (802)
T 4hg6_A 318 CGSAAVLRRRALDEAGGFAGETI---TEDAETALEIHSRGWKSLYIDRAMIAGLQPE------------TFASFIQQRGR 382 (802)
T ss_dssp CSSSEEEEHHHHHHHTTCCCSSS---SHHHHHHHHHHTTTCCEEECCCCCEEECCCC------------SHHHHHHHHHH
T ss_pred cccchhhhHHHHHHcCCcCCCCc---chHHHHHHHHHHcCCeEEEecCCEEEecCCC------------CHHHHHHHHHH
Confidence 58889999999999999998764 5999999999999999999999999886421 12223333334
Q ss_pred HHhhhhhHHHhccccc
Q psy5324 82 WMDDYKRLFYAHRRDL 97 (131)
Q Consensus 82 W~de~k~~fy~~~p~~ 97 (131)
|.-..-+.+...+|..
T Consensus 383 W~~G~~q~l~~~~pl~ 398 (802)
T 4hg6_A 383 WATGMMQMLLLKNPLF 398 (802)
T ss_dssp HHHHHHHHHHHSCTTS
T ss_pred HHccHHHHHHHhCccc
Confidence 6655555555555533
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=96.84 E-value=0.00017 Score=63.23 Aligned_cols=53 Identities=0% Similarity=-0.157 Sum_probs=0.0
Q ss_pred CCcEEEEehHHHHHhC-CCcccCcccccchhhhHHHHHHcCCeEEEeecceEEeec
Q psy5324 2 AGGLFAVDRKYFFELG-SYDQQMEVWGGENLEISFRVWMCGGSLECVPCSRIGHIF 56 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lG-gfD~g~~~~GgEd~els~R~w~~Gg~~~~~P~srV~Hi~ 56 (131)
.++.++++|+.|.++| +||+++.. +||.|+++|+...|+++.++|...+.|.-
T Consensus 153 ~~~~~~~rr~~l~~~gl~fde~~~~--~ED~d~~~rl~~~g~~i~~~~~~~~~~yr 206 (729)
T 3l7i_A 153 SACNIIFRTAIVRAHHIRFNENLNT--YVDWSFVLEYMKYVNKFVRIFNFPFYFRG 206 (729)
T ss_dssp --------------------------------------------------------
T ss_pred chhheeeeHHHHHHcCCCcCCCCCc--ccCHHHHHHHHHhcCCEEEecCcEEEEEE
Confidence 4667899999999999 99999853 69999999999999999999555566543
No 14
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=96.48 E-value=1.9e-05 Score=69.00 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=38.2
Q ss_pred chhHHHHHHHHhhhhhHHHhccccchhh--------ccccccC-CCCCCccccC-----cC--Cccc-cccccC
Q psy5324 73 INTARLVEIWMDDYKRLFYAHRRDLVDK--------IRPRRES-NPRPSAYKAD-----AL--PTKL-TRLTSL 129 (131)
Q Consensus 73 ~N~~R~aevW~de~k~~fy~~~p~~~~~--------i~~R~~~-~~~P~~~~~~-----~~--p~~~-~~~~~~ 129 (131)
+|..|+|||||||||+++|. .| +++. ++.|+.+ ||++|-|+|| .. |... ++|+|.
T Consensus 423 ~N~~R~aeVwmD~~k~~~~~-~P-~~~~~~gdvs~~~~Lr~~l~ncksF~wy~~~~~P~~~~~~~~~~g~i~n~ 494 (614)
T 3a21_A 423 TSSARTATLQVNGQTATTVS-FP-PTGASAGTVSVEVSLSKGSANTLALSGGPATEGITVRPLPGTNGALVTGK 494 (614)
T ss_dssp SSSCEEEEEEETTSCCEEEE-EC-CCCSSCEEEEEEEEECSEEEEEEEEESSSCEEEEEEEECGGGCBBCCEET
T ss_pred CCCCceEEEEECCceeEEEe-cC-CCCCCccceeEEEecccCCcceeeecccccccCceeeccCCCceEEEEEC
Confidence 68999999999999999997 46 3331 3345554 8977777655 32 2344 788875
No 15
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=95.76 E-value=0.0075 Score=47.78 Aligned_cols=48 Identities=17% Similarity=0.271 Sum_probs=37.4
Q ss_pred CCcEEEEehHHHHHhCCCcccCcccccchhhhHHHHHH-cCCe-EEEeecceEEe
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVWM-CGGS-LECVPCSRIGH 54 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w~-~Gg~-~~~~P~srV~H 54 (131)
.||+++++|+.|+++| ||+++ +||.|+.+|+.. .|.. +..+|.....|
T Consensus 214 ~~g~~~~rr~~l~~i~-f~~~~----~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 214 LGGEYAATRELLTSVP-FAPGY----GVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp TCSCEEEEHHHHTTSC-BCCGG----GHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred CccceeeeHHHHHhCC-CCCCC----cccHHHHHHHHHhcCCccEeeecceEEec
Confidence 4778999999999998 88764 499999999987 5543 77777654444
No 16
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=90.17 E-value=0.16 Score=41.79 Aligned_cols=47 Identities=19% Similarity=0.290 Sum_probs=38.1
Q ss_pred CcEEEEehHHHHHhCCCcccCcccccchhhhHHHHH-HcCCe-EEEeecceEEe
Q psy5324 3 GGLFAVDRKYFFELGSYDQQMEVWGGENLEISFRVW-MCGGS-LECVPCSRIGH 54 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD~g~~~~GgEd~els~R~w-~~Gg~-~~~~P~srV~H 54 (131)
||.++++|+.++++ +|++| | +.++|+.+++. .+|.. +.-+|-....|
T Consensus 260 sG~~a~rR~~l~~i-~f~~g---y-g~e~ell~~~~~~~G~~~I~eVpi~~~~h 308 (387)
T 3f1y_A 260 AGEFVADRELFCSI-PFLTG---Y-AVETGIMIDVLKKVGLGAMAQVDLGERQN 308 (387)
T ss_dssp CSCEEEEHHHHTTS-CEECS---T-THHHHHHHHHHHHHCGGGEEEEEEEECCC
T ss_pred cccEEEEHHHHHhC-CCCCC---c-chHHHHHHHHHHhcCCCeEEEEecceeec
Confidence 78899999999999 68754 7 58899999985 56887 99998766443
No 17
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=62.27 E-value=6.2 Score=32.60 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=37.2
Q ss_pred CcEEEEehHHHHHhCCCc--ccCcccccchhhhHHHHHHcCCeEEEeecc
Q psy5324 3 GGLFAVDRKYFFELGSYD--QQMEVWGGENLEISFRVWMCGGSLECVPCS 50 (131)
Q Consensus 3 Gg~fai~r~~F~~lGgfD--~g~~~~GgEd~els~R~w~~Gg~~~~~P~s 50 (131)
+|.++++|+.++++...+ +....| +.++|+..++...|.++.-+|..
T Consensus 164 sG~~a~~R~vl~~l~~~~~~~~~~~f-g~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 164 GGELLMRREVAAMLYEDERVRRRSDW-GIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp CCCEEEEHHHHHHHHHCHHHHTCCST-THHHHHHHHHHHTTCCEEEEECT
T ss_pred cccEEEeHHHHHHHhhhcccCcCCCc-chHHHHHHHHHHcCCEEEEEECc
Confidence 577899999999984321 145567 47999999999999999888853
No 18
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=59.78 E-value=3.3 Score=31.95 Aligned_cols=53 Identities=11% Similarity=0.011 Sum_probs=39.5
Q ss_pred CCcEEEEehHHHHHhCCCcccC--------cccccchhhhHHHHHHcCCeE-------EEeecceEEeec
Q psy5324 2 AGGLFAVDRKYFFELGSYDQQM--------EVWGGENLEISFRVWMCGGSL-------ECVPCSRIGHIF 56 (131)
Q Consensus 2 ~Gg~fai~r~~F~~lGgfD~g~--------~~~GgEd~els~R~w~~Gg~~-------~~~P~srV~Hi~ 56 (131)
++|+++|+|+.|+.| --+.| .-|=|||+-+|.-+--.|+.+ .+-|.-+|+|--
T Consensus 117 ~tGF~lIkR~V~e~L--~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (203)
T 2c0n_A 117 GLGFTFIKREFLEKI--KRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSLKAYHFIDERLALSPDR 184 (203)
T ss_dssp CSSEEEEEHHHHTTS--CSSCCCC---------CCHHHHHHHHHCCCEEEEEEEEEEEESSSSEEECTTS
T ss_pred cccEEEEhHHHHHHH--hhhhhhcCChhhhccccCCceEEEeccccccccccccccceeeccccccCccc
Confidence 579999999999998 22322 334579999999988888888 777777887753
Done!