Query psy5325
Match_columns 379
No_of_seqs 271 out of 1936
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 23:44:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5325.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5325hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwb_A ECE-1, endothelin-conve 100.0 8.1E-62 2.8E-66 510.4 22.1 334 8-359 140-517 (670)
2 3zuk_A Endopeptidase, peptidas 100.0 2.2E-60 7.5E-65 498.5 25.8 324 8-359 172-539 (699)
3 1r1h_A Neprilysin; enkephalina 100.0 5.9E-59 2E-63 491.3 23.4 334 8-358 150-539 (696)
4 3dwb_A ECE-1, endothelin-conve 99.2 6.6E-12 2.3E-16 131.7 2.8 61 318-378 6-66 (670)
5 3zuk_A Endopeptidase, peptidas 99.1 1.5E-11 5E-16 129.0 3.4 55 324-378 47-101 (699)
6 1r1h_A Neprilysin; enkephalina 99.1 3.5E-11 1.2E-15 126.7 3.1 60 319-378 11-70 (696)
7 3hyb_A RBCX protein; rubisco, 25.2 2E+02 0.0067 23.6 6.6 53 137-191 31-83 (155)
8 3ka1_A RBCX protein; chaperone 22.1 2.9E+02 0.01 21.8 7.0 50 137-190 11-63 (126)
9 2p9x_A Hypothetical protein PH 19.3 2.5E+02 0.0085 20.9 5.5 42 182-223 47-96 (99)
10 2hep_A UPF0291 protein YNZC; S 17.6 25 0.00086 26.0 -0.2 41 214-254 35-75 (85)
No 1
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} SCOP: d.92.1.0
Probab=100.00 E-value=8.1e-62 Score=510.44 Aligned_cols=334 Identities=29% Similarity=0.513 Sum_probs=294.5
Q ss_pred cccCCCCCcccchhhhccc-cccCCccccCCCChhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHcCC-cch-----h-HH
Q psy5325 8 HAELDEDTTSMGSAHITEG-ISTSATHIHYYPSTSFWKLRTLLEKCLIVLNCTLLSLVVLFGCLLGS-TEK-----I-ST 79 (379)
Q Consensus 8 ~~~~d~k~s~~~~~~~~q~-~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~~aY~~~~~~~~~llG~-~~~-----~-~v 79 (379)
.|.+|+|||++|+++|+|| |+ ||+++||....... .++++|++||.+++.++|. +++ + +|
T Consensus 140 ~V~~D~~ns~~~~i~l~q~~l~--------Lp~r~yy~~~~~~~----~~~~~y~~~~~~l~~~~g~~~~~~a~~~a~~v 207 (670)
T 3dwb_A 140 YVSADSKNSNSNVIQVDQSGLG--------LPSRDYYLNKTENE----KVLTGYLNYMVQLGKLLGGGDEEAIRPQMQQI 207 (670)
T ss_dssp EEEEETTEEEEEEEEEECCCCS--------SSSTHHHHTTTTSC----CHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred EeecCCCCCcceEEEeecCCCC--------CCcHHHHhCcchhH----HHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 4789999999999999999 88 88889997654222 3458999999999999998 532 1 99
Q ss_pred HHHHHhhh-----------hhhhhHH-----------------HHHHHhcCCCCCCCCCcEEecChHHHHHHHHHHhccc
Q psy5325 80 TDFSKKKK-----------KKNIKHQ-----------------FLEAAHSAGEMPHRSQLHPVYAPKYLQQLTRLVKEYN 131 (379)
Q Consensus 80 ~~fE~~LA-----------~~~~y~~-----------------~l~~~~~~~~~~~~~~~V~V~~p~Yl~~l~~ll~~~~ 131 (379)
++||++|| +.++||+ |++.++. ..+++..++|+|.+|+||++|.++|.+++
T Consensus 208 ~~fE~~La~~~~~~~~~rd~~~~y~~~t~~eL~~~~p~i~w~~~l~~~~~-~~~~~~~~~v~v~~~~yl~~l~~ll~~t~ 286 (670)
T 3dwb_A 208 LDFETALANITIPQEKRRDEELIYHKVTAAELQTLAPAINWLPFLNTIFY-PVEINESEPIVVYDKEYLEQISTLINTTD 286 (670)
T ss_dssp HHHHHHHHHHSCCGGGGSCHHHHCEEEEHHHHHHHSTTSCHHHHHHHHST-TSCCCTTCEEEESCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhhcCCHHHhcCchhccCCCcHHHHHHhCCCCCHHHHHHHHcc-ccCCCCCCeEEEcCHHHHHHHHHHHHhcc
Confidence 99999999 2345554 6777764 24566778999999999999999998764
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhcCCC-CCCchHhhHHHHHHHHHhhHhhhhhHhhccCCCch
Q psy5325 132 STTDGKIVLNNYLVWQTVKALTGYLSKAFRDAYKGLRKALFGSE-GGEEPWKFCVSDTNSVLGFALGAMYVREVFNGNSK 210 (379)
Q Consensus 132 ~~~~~~~~l~nYl~w~~v~~~~~~L~~~~~~~~~~f~~~l~G~~-~~~~r~~~C~~~v~~~~~~~lg~lyv~~~f~~~~k 210 (379)
+++|+|||+|++|.+++++|+++|+++.++|.++++|.+ +..|||+.|+..|++.||+++|++||++||++++|
T Consensus 287 -----~~~l~nYl~~~~i~~~~~~L~~~~~~~~~~f~~~l~G~~~~~~~r~~~C~~~v~~~l~~a~g~lyv~~~f~~~~k 361 (670)
T 3dwb_A 287 -----RCLLNNYMIWNLVRKTSSFLDQRFQDADEKFMEVMYGTKKTSLPRWKFCVSDTENNLGFALGPMFVKATFAEDSK 361 (670)
T ss_dssp -----HHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHTTC----------CTHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred -----hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 688999999999999999999999999999999999988 78899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHhhcccccccCcccCChhhHHHHhcccccCccchHHHHHHHHHHH
Q psy5325 211 PMAEDMINNIRQAFKKNLLSLKWMDKETFQLAENKADAITDMIGFPNYIMDADKLDEKYAELEVKEDEYFRNNIRAGMHS 290 (379)
Q Consensus 211 ~~v~~mv~~Ik~~f~~~L~~~~WMd~~Tk~~Al~Kl~~m~~~IGyPd~~~n~~~l~~~Y~~l~i~~~~yf~n~l~~~~~~ 290 (379)
+.|++|+++||.+|+++|++++|||++||++|++||++|+.+||||+++.+++.|+++|++|++.+++||+|++++.++.
T Consensus 362 ~~~~~mv~~ik~~f~~~l~~~~Wm~~~Tk~~A~~Kl~~~~~~IGyPd~~~~~~~l~~~Y~~l~i~~~~~~~n~~~~~~~~ 441 (670)
T 3dwb_A 362 SIATEIILEIKKAFEESLSTLKWMDEETRKSAKEKADAIYNMIGYPNFIMDPKELDKVFNDYTAVPDLYFENAMRFFNFS 441 (670)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHCEEEEESCGGGGSHHHHHHHHTTCCCCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCCHHHHHHHHHHHHHHHhhhCCCCccCChHHHHHHhhcccCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred HHHHHhhcCCCCCCCCCC--CCccccccchhhhhhccc---C-CCCCCc-hhhhhhhhccccccccCCCCCCCccc
Q psy5325 291 LKNLLRKLDQPVNKTKSR--PASLPMFGSETAATILSS---L-DPSVDP-CDDFYQYACGSWIKSNPIPDGKASWS 359 (379)
Q Consensus 291 ~~~~~~~l~~pvd~~~w~--p~~VNA~Y~p~~N~I~~~---~-d~~~d~-~~df~~~~~~~w~~~~~i~~~~~~~~ 359 (379)
.++.++++++|+|+++|. |++|||||+|..|.|.+| | .|.+++ .++...|.--|.+++|||.|+....|
T Consensus 442 ~~~~~~~l~~p~d~~~w~~~p~~vnAyY~p~~N~I~fPa~iLq~Pff~~~~p~a~nyg~iG~vigHEi~H~FD~~G 517 (670)
T 3dwb_A 442 WRVTADQLRKAPNRDQWSMTPPMVNAYYSPTKNEIVFPAGILQAPFYTRSSPKALNFGGIGVVVGHELTHAFDDQG 517 (670)
T ss_dssp HHHHHTTTTSCCCTTCCSSCTTCSCCEEETTTTEEEEEGGGSSTTTCCTTSCHHHHHHTHHHHHHHHHHHTTSTTG
T ss_pred HHHHHHHhCCCCChhhcCCCcceeEEEeccccccccccHHHcCCCCCCCchHHHHHHHHHHHHHHHHHhhccCccc
Confidence 999999999999999999 999999999999999998 3 588887 57889999999999999998876554
No 2
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-60 Score=498.47 Aligned_cols=324 Identities=20% Similarity=0.311 Sum_probs=288.1
Q ss_pred cccCCCCCcccchhhhccc-cccCCccccCCCChhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHc-CCcch-----h-HH
Q psy5325 8 HAELDEDTTSMGSAHITEG-ISTSATHIHYYPSTSFWKLRTLLEKCLIVLNCTLLSLVVLFGCLL-GSTEK-----I-ST 79 (379)
Q Consensus 8 ~~~~d~k~s~~~~~~~~q~-~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~~aY~~~~~~~~~ll-G~~~~-----~-~v 79 (379)
.|.+|+|||++|++||+|| |+ ||+++||.+. .. .+++++|+++|.+++.++ |.+++ + +|
T Consensus 172 ~V~~D~kns~~~~i~l~q~~l~--------Lp~r~yY~~~-~~----~~~~~aY~~~i~~~l~l~~G~~~~~a~~~a~~v 238 (699)
T 3zuk_A 172 YVDTDSKDSTRYLVHFTQSGIG--------LPDESYYRDE-QH----AAVLAAYPGHIARMFGLVYGGESRDHAKTADRI 238 (699)
T ss_dssp EEEEETTEEEEEEEEEEECCCS--------SSCGGGGTCG-GG----HHHHHHHHHHHHHHHHHHHSSCGGGGHHHHHHH
T ss_pred EeecCCCCccceeeeccCCCCC--------CCcHHHhcCh-hH----HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence 4789999999999999999 88 8888888732 33 445699999999999999 98752 1 99
Q ss_pred HHHHHhhh-----------hhhhhHH-----------------HHHHHhcCCCCCCCCCcEEecChHHHHHHHHHHhccc
Q psy5325 80 TDFSKKKK-----------KKNIKHQ-----------------FLEAAHSAGEMPHRSQLHPVYAPKYLQQLTRLVKEYN 131 (379)
Q Consensus 80 ~~fE~~LA-----------~~~~y~~-----------------~l~~~~~~~~~~~~~~~V~V~~p~Yl~~l~~ll~~~~ 131 (379)
++||++|| +.++||+ ||+.++ ...+..++|+|.+|+||++|.++|.+++
T Consensus 239 ~~fE~~LA~~~~~~~e~rd~~~~yn~~tl~eL~~~~p~idw~~~l~~~~---~~~~~~~~Viv~~p~yl~~l~~ll~~t~ 315 (699)
T 3zuk_A 239 VALETKLADAHWDVVKRRDADLGYNLRTFAQLQTEGAGFDWVSWVTALG---SAPDAMTELVVRQPDYLVTFASLWASVN 315 (699)
T ss_dssp HHHHHHHHHHSCCHHHHTCTTTTCCEEEHHHHHHHTTTSCHHHHHHHHT---CCTTTCSEEEESCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCHHHhcCchhccCCCcHHHHHHhCCCCCHHHHHHHhC---CCCCCCceEEECCHHHHHHHHHHHhcCC
Confidence 99999999 3456665 555553 2233358999999999999999998764
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhhCHHHHHHHHH-HHHhhcCCCCCCchHhhHHHHHHHHHhhHhhhhhHhhccCCCch
Q psy5325 132 STTDGKIVLNNYLVWQTVKALTGYLSKAFRDAYKG-LRKALFGSEGGEEPWKFCVSDTNSVLGFALGAMYVREVFNGNSK 210 (379)
Q Consensus 132 ~~~~~~~~l~nYl~w~~v~~~~~~L~~~~~~~~~~-f~~~l~G~~~~~~r~~~C~~~v~~~~~~~lg~lyv~~~f~~~~k 210 (379)
.++|+|||+|++|.+++++|+.+|+++.++ |.++++|.++..|||+.|+..|++.||+++|++||++||++++|
T Consensus 316 -----~~~l~nYl~~~~i~~~a~~Ls~~~~~~~~~Fy~~~l~G~~~~~~rwk~Cv~~v~~~l~~alg~lyv~~~F~~~~k 390 (699)
T 3zuk_A 316 -----VEDWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGAQQLRDRWKRGVSLVENLMGDAVGKLYVQRHFPPDAK 390 (699)
T ss_dssp -----HHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHTHHHHCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHCC---CC
T ss_pred -----HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCccCccHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 688999999999999999999999999999 58999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHhhcccccccCcccCChhhHHHHhcccccCccchHHHHHHHHHHH
Q psy5325 211 PMAEDMINNIRQAFKKNLLSLKWMDKETFQLAENKADAITDMIGFPNYIMDADKLDEKYAELEVKEDEYFRNNIRAGMHS 290 (379)
Q Consensus 211 ~~v~~mv~~Ik~~f~~~L~~~~WMd~~Tk~~Al~Kl~~m~~~IGyPd~~~n~~~l~~~Y~~l~i~~~~yf~n~l~~~~~~ 290 (379)
+.|++||++||++|+++|++++|||++||++|++||++|+.+||||+++ ++|++|++.+++||+|++++.++.
T Consensus 391 ~~v~~mv~~ik~af~~~l~~~~Wm~~~Tk~~A~~Kl~~m~~~IGyPd~~-------~~Y~~L~i~~~~~~~N~~~~~~~~ 463 (699)
T 3zuk_A 391 SRIDTLVDNLQEAYRISISELDWMTPQTRQRALAKLNKFTAKVGYPIKW-------RDYSKLAIDRDDLYGNVQRGYAVN 463 (699)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHTCEEEEESCSSC-------CCCTTCCCCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhcCCChhh-------hhhhcCcCCCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988 469999999899999999999999
Q ss_pred HHHHHhhcCCCCCCCCCC--CCccccccchhhhhhccc---C-CCCCCc-hhhhhhhhccccccccCCCCCCCccc
Q psy5325 291 LKNLLRKLDQPVNKTKSR--PASLPMFGSETAATILSS---L-DPSVDP-CDDFYQYACGSWIKSNPIPDGKASWS 359 (379)
Q Consensus 291 ~~~~~~~l~~pvd~~~w~--p~~VNA~Y~p~~N~I~~~---~-d~~~d~-~~df~~~~~~~w~~~~~i~~~~~~~~ 359 (379)
.++.++++++|+|+++|. |++|||||+|..|.|.+| | .|.+++ .++...|.--|.+++|||.|+....|
T Consensus 464 ~~~~l~~l~~pvd~~~W~m~p~~vNAyY~p~~N~I~fPa~iLq~Pff~~~~p~a~nyG~iG~vIgHEi~HgFD~~G 539 (699)
T 3zuk_A 464 HDRELAKLFGPVDRDEWFMTPQTVNAYYNPGMNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEIGHGFDDQG 539 (699)
T ss_dssp HHHHHHGGGSCCCSSCCSSCTTCSCCEEEGGGTEEEEEGGGSSTTTCCTTSCHHHHHHTHHHHHHHHHHHTTSTTG
T ss_pred HHHHHHHhCCCCCcccccCCcccceeEEecCcCeEEeeHHhcCCCCCCCccchHHHhHHHHHHHHHHHHHHhhhhc
Confidence 999999999999999999 999999999999999998 3 588887 68888999999999999998876554
No 3
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A*
Probab=100.00 E-value=5.9e-59 Score=491.28 Aligned_cols=334 Identities=27% Similarity=0.450 Sum_probs=296.6
Q ss_pred cccCCCCCcccchhhhccc-cccCCccccCCCChhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHc-C-----Ccch----
Q psy5325 8 HAELDEDTTSMGSAHITEG-ISTSATHIHYYPSTSFWKLRTLLEKCLIVLNCTLLSLVVLFGCLL-G-----STEK---- 76 (379)
Q Consensus 8 ~~~~d~k~s~~~~~~~~q~-~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~~aY~~~~~~~~~ll-G-----~~~~---- 76 (379)
.|.+|.|||++|+++|+|| |+ ||+++||....... .++++|.++|.+++.++ | .++.
T Consensus 150 ~v~~D~~ns~~~~i~l~q~~l~--------lp~~~yy~~~~~~~----~~~~~y~~~~~~~~~~~~g~~~~~~~~~~~~~ 217 (696)
T 1r1h_A 150 FVGTDDKNSVNHVIHIDQPRLG--------LPSRDYYECTGIYK----EACTAYVDFMISVARLIRQEERLPIDENQLAL 217 (696)
T ss_dssp EEEEETTEEEEEEEEEECCCCS--------SSSGGGGGCSGGGH----HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred EeeCCCCCCceeEEEecCCCCC--------CCcHHHHhcccchH----HHHHHHHHHHHHHHHHhcCCccCCCChHHHHH
Confidence 4788999999999999998 88 78888886543333 34589999999999999 8 6542
Q ss_pred -h-HHHHHHHhhh-----------hhhhhHH-----------------------HHHHHhcC-CCCCCCCCcEEecChHH
Q psy5325 77 -I-STTDFSKKKK-----------KKNIKHQ-----------------------FLEAAHSA-GEMPHRSQLHPVYAPKY 119 (379)
Q Consensus 77 -~-~v~~fE~~LA-----------~~~~y~~-----------------------~l~~~~~~-~~~~~~~~~V~V~~p~Y 119 (379)
+ +|++||++|| +.+.||+ |++.++.. ...++.++.|+|.+|+|
T Consensus 218 ~a~~v~~~E~~La~~~~~~~~~rd~~~~y~~~t~~el~~~~p~~~~~~~~~w~~~l~~~~~~~~~~~~~~~~v~v~~p~y 297 (696)
T 1r1h_A 218 EMNKVMELEKEIANATAKPEDRNDPMLLYNKMTLAQIQNNFSLEINGKPFSWLNFTNEIMSTVNISITNEEDVVVYAPEY 297 (696)
T ss_dssp HHHHHHHHHHHHHHHSCCGGGSCCHHHHCCEEEHHHHHHHSCCCSSSSCCCHHHHHHHHHGGGTCCCCTTCEEEESCHHH
T ss_pred HHHHHHHHHHHHHHhcCChhhccCHHHhcCcccHHHHHHhCCCccccCccCHHHHHHHhccccccccCCCCeEEEcCHHH
Confidence 1 9999999999 2233433 55555531 12255678999999999
Q ss_pred HHHHHHHHhcccCCCccHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhcCCCCCCchHhhHHHHHHHHHhhHhhhh
Q psy5325 120 LQQLTRLVKEYNSTTDGKIVLNNYLVWQTVKALTGYLSKAFRDAYKGLRKALFGSEGGEEPWKFCVSDTNSVLGFALGAM 199 (379)
Q Consensus 120 l~~l~~ll~~~~~~~~~~~~l~nYl~w~~v~~~~~~L~~~~~~~~~~f~~~l~G~~~~~~r~~~C~~~v~~~~~~~lg~l 199 (379)
|++|.++|.+++ +++|+|||+|++|.+++++|+++|+++.++|.++++|.++..+||+.|+..|++.||+++|++
T Consensus 298 l~~l~~ll~~t~-----~~~l~nYl~~~~~~~~~~~L~~~~~~~~~~f~~~l~G~~~~~~r~~~Cv~~v~~~l~~a~g~l 372 (696)
T 1r1h_A 298 LTKLKPILTKYS-----ARDLQNLMSWRFIMDLVSSLSRTYKESRNAFRKALYGTTSETATWRRCANYVNGNMENAVGRL 372 (696)
T ss_dssp HHHHHHHHTTSC-----HHHHHHHHHHHHHHHHGGGSCHHHHHTTHHHHHHHHCCSSCCCHHHHHHHHHHHHSHHHHHHH
T ss_pred HHHHHHHHHhCC-----HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999997654 688999999999999999999999999999999999999989999999999999999999999
Q ss_pred hHhhccCCCchHHHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHhhcccccccCcccCChhh-HHHHhcccccCccc
Q psy5325 200 YVREVFNGNSKPMAEDMINNIRQAFKKNLLSLKWMDKETFQLAENKADAITDMIGFPNYIMDADK-LDEKYAELEVKEDE 278 (379)
Q Consensus 200 yv~~~f~~~~k~~v~~mv~~Ik~~f~~~L~~~~WMd~~Tk~~Al~Kl~~m~~~IGyPd~~~n~~~-l~~~Y~~l~i~~~~ 278 (379)
||++||++++|+.|++||++||.+|+++|++++|||++||++|++||++|+.+||||+++.+++. |+++|++|++.+++
T Consensus 373 yv~~~f~~~~k~~~~~mv~~i~~af~~~l~~~~Wm~~~Tk~~A~~Kl~~~~~~IGyPd~~~~~~~~l~~~Y~~l~i~~~~ 452 (696)
T 1r1h_A 373 YVEAAFAGESKHVVEDLIAQIREVFIQTLDDLTWMDAETKKRAEEKALAIKERIGYPDDIVSNDNKLNNEYLELNYKEDE 452 (696)
T ss_dssp HHHHHCCSSHHHHHHHHHHHHHHHHHHHGGGCTTSCHHHHHHHHHHHHTCEEEEECCTHHHHCHHHHHHHTTTCCCCTTC
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCCccccCchhhHHHhhccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999988888 99999999998889
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CCccccccchhhhhhccc---C-CCCCCc-hhhhhhhhccccccccCC
Q psy5325 279 YFRNNIRAGMHSLKNLLRKLDQPVNKTKSR--PASLPMFGSETAATILSS---L-DPSVDP-CDDFYQYACGSWIKSNPI 351 (379)
Q Consensus 279 yf~n~l~~~~~~~~~~~~~l~~pvd~~~w~--p~~VNA~Y~p~~N~I~~~---~-d~~~d~-~~df~~~~~~~w~~~~~i 351 (379)
||+|++++.++..++.+++|++|+|+++|. |++|||||+|..|.|.+| | .|.+++ .++...|.--|.+++|+|
T Consensus 453 ~~~N~~~~~~~~~~~~~~~l~~pvd~~~w~~~p~~vNA~Y~p~~N~I~~Pa~iLq~Pff~~~~~~a~nyg~iG~vigHEi 532 (696)
T 1r1h_A 453 YFENIIQNLKFSQSKQLKKLREKVDKDEWISGAAVVNAFYSSGRNQIVFPAGILQPPFFSAQQSNSLNYGGIGMVIGHEI 532 (696)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSCCCTTCCSSCSSCSCCEEETTTTEEEEEGGGSSTTTCCTTSCHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCChhhccCCccceeeEEcCcCCEEEeeHHHhCCcccCccccHHHHhhHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999998 3 488887 578889999999999999
Q ss_pred CCCCCcc
Q psy5325 352 PDGKASW 358 (379)
Q Consensus 352 ~~~~~~~ 358 (379)
.|+....
T Consensus 533 ~H~FD~~ 539 (696)
T 1r1h_A 533 THGFDDN 539 (696)
T ss_dssp HGGGSTT
T ss_pred HHHhhhh
Confidence 8875433
No 4
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} SCOP: d.92.1.0
Probab=99.16 E-value=6.6e-12 Score=131.66 Aligned_cols=61 Identities=51% Similarity=1.067 Sum_probs=57.8
Q ss_pred hhhhhhcccCCCCCCchhhhhhhhccccccccCCCCCCCccchHHHHHHHHHHHHHHHhhc
Q psy5325 318 ETAATILSSLDPSVDPCDDFYQYACGSWIKSNPIPDGKASWSMFNILDLKNNFIVKNALGE 378 (379)
Q Consensus 318 p~~N~I~~~~d~~~d~~~df~~~~~~~w~~~~~i~~~~~~~~~f~~l~~~~~~~l~~~l~~ 378 (379)
..++.|+..||+++|||+|||+||||+|++.|+||++++++|+|..|+++++.+|+++|++
T Consensus 6 ~~A~~il~~mD~svdPCdDFY~yacG~W~~~~~ip~~~~~~~~f~~l~~~~~~~l~~iLe~ 66 (670)
T 3dwb_A 6 SVTSSILSSMDPTVDPCHDFFSYACGGWIKANPVPDGHSRWGTFSNLWEHNQAIIKHLLEN 66 (670)
T ss_dssp HHHHHHHHHCCTTSCTTTCHHHHHHHHHHHHCCCCSSCSEEEHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHcCCCCCCccccHHHHhhcCHHhcCCCCCcccchhhHHHHHHHHHHHHHHHHhc
Confidence 4567788899999999999999999999999999999999999999999999999999986
No 5
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis}
Probab=99.13 E-value=1.5e-11 Score=129.02 Aligned_cols=55 Identities=25% Similarity=0.453 Sum_probs=53.0
Q ss_pred cccCCCCCCchhhhhhhhccccccccCCCCCCCccchHHHHHHHHHHHHHHHhhc
Q psy5325 324 LSSLDPSVDPCDDFYQYACGSWIKSNPIPDGKASWSMFNILDLKNNFIVKNALGE 378 (379)
Q Consensus 324 ~~~~d~~~d~~~df~~~~~~~w~~~~~i~~~~~~~~~f~~l~~~~~~~l~~~l~~ 378 (379)
+..||++++||+|||+||||+|++.|+||++++++|+|..|+++++++||+|||+
T Consensus 47 ~~~md~sv~PcdDFY~yacG~W~~~~~IP~d~~~~g~f~~L~~~~~~~l~~ile~ 101 (699)
T 3zuk_A 47 LSHIDADARPQDDLFGHVNGRWLAEHEIPADRATDGAFRSLFDRAETQVRDLIIQ 101 (699)
T ss_dssp CTTCCTTSCTTTCHHHHHHHHHHHHCCCCTTCSEEEHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCCccccHHHHhhhHHHHhCCCCcccccccHHHHHHHHHHHHHHHHHHh
Confidence 5679999999999999999999999999999999999999999999999999985
No 6
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A*
Probab=99.07 E-value=3.5e-11 Score=126.74 Aligned_cols=60 Identities=37% Similarity=0.880 Sum_probs=56.1
Q ss_pred hhhhhcccCCCCCCchhhhhhhhccccccccCCCCCCCccchHHHHHHHHHHHHHHHhhc
Q psy5325 319 TAATILSSLDPSVDPCDDFYQYACGSWIKSNPIPDGKASWSMFNILDLKNNFIVKNALGE 378 (379)
Q Consensus 319 ~~N~I~~~~d~~~d~~~df~~~~~~~w~~~~~i~~~~~~~~~f~~l~~~~~~~l~~~l~~ 378 (379)
.+..+...||+++|||+|||+||||+|...|+||++++++|+|..|+++++.+++++|++
T Consensus 11 ~a~~~~~~md~svdPCdDFY~yaCG~W~~~~~ip~d~~~~~~f~~L~~~~~~~l~~iL~~ 70 (696)
T 1r1h_A 11 SAARLIQNMDATTEPCTDFFKYACGGWLKRNVIPETSSRYGNFDILRDELEVVLKDVLQE 70 (696)
T ss_dssp HHHHHHHHCCTTSCTTTCHHHHHHHHHHHHCCCCTTCSEEEHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHhcCCCCCCcchhHHHHhhccHHhcCCCCcccccccHHHHHHHHHHHHHHHHHhc
Confidence 445677789999999999999999999999999999999999999999999999999975
No 7
>3hyb_A RBCX protein; rubisco, protein complex assembly, chaperone; HET: SO4; 2.30A {Anabaena SP} PDB: 2wvw_I 2peo_A* 3rg6_C
Probab=25.16 E-value=2e+02 Score=23.57 Aligned_cols=53 Identities=15% Similarity=0.083 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhcCCCCCCchHhhHHHHHHHH
Q psy5325 137 KIVLNNYLVWQTVKALTGYLSKAFRDAYKGLRKALFGSEGGEEPWKFCVSDTNSV 191 (379)
Q Consensus 137 ~~~l~nYl~w~~v~~~~~~L~~~~~~~~~~f~~~l~G~~~~~~r~~~C~~~v~~~ 191 (379)
..+|.||+.++.|+....-|.+---..+.-+..-+.+ ...+-...|-.++...
T Consensus 31 ak~L~~YfTYqAvr~VLaQL~EtNP~~y~wL~~F~s~--~iqDGe~fl~~L~~E~ 83 (155)
T 3hyb_A 31 AKTLQSYLTYQALRTVLAQLGETNPPLALWLHNFSAG--KVQDGEKYIEELFLEK 83 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTT--CCSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcC--CcccHHHHHHHHHhhC
Confidence 4669999999999888777654222222222333332 3344556677776653
No 8
>3ka1_A RBCX protein; chaperone, helix bundle, rubisco assembly; 1.71A {Thermosynechococcus elongatus bp-1} PDB: 3q20_A
Probab=22.12 E-value=2.9e+02 Score=21.77 Aligned_cols=50 Identities=14% Similarity=0.169 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhCHHHHHHH---HHHHHhhcCCCCCCchHhhHHHHHHH
Q psy5325 137 KIVLNNYLVWQTVKALTGYLSKAFRDAY---KGLRKALFGSEGGEEPWKFCVSDTNS 190 (379)
Q Consensus 137 ~~~l~nYl~w~~v~~~~~~L~~~~~~~~---~~f~~~l~G~~~~~~r~~~C~~~v~~ 190 (379)
..+|.||+.++.++....-|.+---..+ .+|... + ...+-...|-.++..
T Consensus 11 ak~L~~yfTY~Avr~Vl~QL~E~np~~~~wL~~F~~~--~--~~~DGe~fl~~L~~E 63 (126)
T 3ka1_A 11 TKTLISYLTYQAVRTVIGQLAETDPPRSLWLHQFTSQ--E--SIQDGERYLEALFRE 63 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH--H--CSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHc--C--CCccHHHHHHHHHhh
Confidence 4679999999998887776654211111 233322 2 223445567776654
No 9
>2p9x_A Hypothetical protein PH0832; pyrococcus horikoshii OT3, NPPSFA, national project on prote structural and functional analyses; 1.65A {Pyrococcus horikoshii}
Probab=19.28 E-value=2.5e+02 Score=20.93 Aligned_cols=42 Identities=10% Similarity=0.173 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHhhHhhhh---h----HhhccC-CCchHHHHHHHHHHHHH
Q psy5325 182 KFCVSDTNSVLGFALGAM---Y----VREVFN-GNSKPMAEDMINNIRQA 223 (379)
Q Consensus 182 ~~C~~~v~~~~~~~lg~l---y----v~~~f~-~~~k~~v~~mv~~Ik~~ 223 (379)
+..-+.|+..||.-.|++ + ++.... +..+.+.+++++-||+-
T Consensus 47 ~kFkeaV~~LFGEysarllem~i~~~~~~~L~l~~~~~~lE~lve~lkk~ 96 (99)
T 2p9x_A 47 QKFKEAVSKLFGEYSARLLEMVIISKLKGRLGEDIEANSLEELVSEIRKI 96 (99)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCTTCCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 457778888999999988 3 332222 34456677777777754
No 10
>2hep_A UPF0291 protein YNZC; SR384, structure, autostructure, northeast structural genomics consortium, PSI-1, protein structure initiative, NESG; NMR {Bacillus subtilis} SCOP: a.2.21.1
Probab=17.61 E-value=25 Score=25.97 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHhhcccccc
Q psy5325 214 EDMINNIRQAFKKNLLSLKWMDKETFQLAENKADAITDMIG 254 (379)
Q Consensus 214 ~~mv~~Ik~~f~~~L~~~~WMd~~Tk~~Al~Kl~~m~~~IG 254 (379)
.+-++.+|..|+..|......|++....-.+||..++..-|
T Consensus 35 ~eYl~~fR~~~r~~L~~ikivD~~G~dvtp~Klk~~q~~~~ 75 (85)
T 2hep_A 35 QEYLKGFRSSMKNTLKSVKIIDPEGNDVTPEKLKREQRNNK 75 (85)
T ss_dssp HHHHHHCC---------------------------------
T ss_pred HHHHHHHHHHHHHHhcceeEECCCCCcCCHHHHHHHHHHhC
Confidence 45577888999999999999999988888888887766554
Done!