Query psy5326
Match_columns 157
No_of_seqs 130 out of 621
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 23:46:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5326.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5326hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d7i_A Polypeptide N-acetylgal 99.8 4E-22 1.4E-26 178.3 -2.3 105 30-136 49-159 (570)
2 2ffu_A Ppgalnact-2, polypeptid 99.7 2.1E-18 7.3E-23 150.3 -2.1 97 39-135 10-112 (501)
3 1xhb_A Polypeptide N-acetylgal 99.5 5.5E-16 1.9E-20 133.3 -3.2 71 67-137 1-77 (472)
4 2z86_A Chondroitin synthase; G 97.4 3.5E-05 1.2E-09 68.1 0.9 88 44-132 20-134 (625)
5 3bcv_A Putative glycosyltransf 92.9 0.027 9.3E-07 42.5 1.0 39 93-132 3-45 (240)
6 1qg8_A Protein (spore coat pol 92.6 0.032 1.1E-06 42.6 0.9 37 95-132 1-41 (255)
7 3f1y_A Mannosyl-3-phosphoglyce 92.6 0.006 2.1E-07 52.5 -3.5 97 31-132 32-137 (387)
8 3ckj_A Putative uncharacterize 87.3 0.16 5.4E-06 41.6 0.9 39 93-132 46-89 (329)
9 3l7i_A Teichoic acid biosynthe 84.6 0.19 6.4E-06 45.7 0.0 38 94-132 1-42 (729)
10 2z86_A Chondroitin synthase; G 81.4 0.56 1.9E-05 41.2 1.7 40 92-132 372-415 (625)
11 4hg6_A Cellulose synthase subu 79.9 0.38 1.3E-05 44.8 0.2 42 91-132 136-183 (802)
12 2fy7_A Beta-1,4-galactosyltran 62.9 1.5 5E-05 36.0 -0.1 46 80-132 56-108 (287)
13 4fix_A UDP-galactofuranosyl tr 45.8 1.3 4.6E-05 40.4 -3.4 40 93-133 178-224 (657)
14 2nxv_A ATP synthase subunits r 35.6 4.6 0.00016 31.4 -1.3 46 85-132 5-57 (249)
15 2bo4_A Mannosylglycerate synth 23.0 8.2 0.00028 33.2 -2.1 34 98-131 3-38 (397)
16 1fo8_A Alpha-1,3-mannosyl-glyc 20.3 26 0.00087 29.7 0.5 37 94-132 1-43 (343)
No 1
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.82 E-value=4e-22 Score=178.30 Aligned_cols=105 Identities=28% Similarity=0.459 Sum_probs=93.0
Q ss_pred ccccCCCCCCCCccccCCCcchhHHHhhhhhccchhhhhcccCCCCCCCCCCCccccCcccCCCCCCceEEEEecCCCCC
Q psy5326 30 EDKIIPGLGENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWI 109 (157)
Q Consensus 30 ~~~~~~gpGE~G~~v~L~~~e~~~~e~~~~~~~FN~~lSDrIsL~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAwS 109 (157)
.+..+.|+||+|+|+.|+++++ .++.|++++||+++||+|+++|++||+|++.|+...|++++|.+||||++|||+|+
T Consensus 49 ~~~~~~~~g~~g~~~~~~~~~~--~~~~~~~~~~n~~~sd~i~l~R~~~d~r~~~~~~~~~~~~~P~vSVIIp~yNe~~~ 126 (570)
T 2d7i_A 49 RDAQRVGNGEQGRPYPMTDAER--VDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWS 126 (570)
T ss_dssp HHHTCCSTTGGGCCCCCCTTTT--SSHHHHTTSSCHHHHHTSCTTCCCCCCSCGGGGTCCEESSCCCEEEEEEESSCCHH
T ss_pred ccccCCCCCCCCCceECCHHHH--HHHHHHHcCCCHHHHhccCCCccCCCCCCccceecccCCCCCCeEEEEEECCCCHH
Confidence 3456899999999999986544 47889999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeccc-CCCC-----CCCCCCCCCCCC
Q psy5326 110 PIPDFDTRIMN-NPTD-----PVPPDFKNLEHP 136 (157)
Q Consensus 110 tLLRtv~sv~n-~p~~-----~~~dd~s~~~h~ 136 (157)
.|.|+++||++ +++. +++||+|.-+.+
T Consensus 127 ~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl 159 (570)
T 2d7i_A 127 SLLRTVHSVLNRSPPELVAEIVLVDDFSDREHL 159 (570)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGG
T ss_pred HHHHHHHHHHhcCCccCcEEEEEEECCCCcHHH
Confidence 99999999997 3432 289999986653
No 2
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.67 E-value=2.1e-18 Score=150.28 Aligned_cols=97 Identities=19% Similarity=0.258 Sum_probs=86.0
Q ss_pred CCCccccCCCcchhHHHhhhhhccchhhhhcccCCCCCCCCCCCccccCcccCCCCCCceEEEEecCCCCCccccceeec
Q psy5326 39 ENGRAGTLPGLTNDIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRI 118 (157)
Q Consensus 39 E~G~~v~L~~~e~~~~e~~~~~~~FN~~lSDrIsL~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAwStLLRtv~sv 118 (157)
.+|.+..+++++++..++++++++||+++||+|+++|++||+|++.|+...|+.++|.+||||++|||+++.|.|+++||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~s~~i~~~r~~~d~r~~~~~~~~~~~~~p~vSVIIp~yN~~~~~L~~~l~Sl 89 (501)
T 2ffu_A 10 DFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSV 89 (501)
T ss_dssp GSCHHHHHHTTCCCTTSCTTTTTSSCHHHHHHSCTTCCCCCCSCGGGGGCCCCSSCCCEEEEEEESSCCHHHHHHHHHHH
T ss_pred hCCcccccChhhhhhhhhhHHhcCcCHHHHcccCCCCcCCCCChhHhccccCCcCCCCEEEEEEeCcCcHHHHHHHHHHH
Confidence 44566667777888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CC----CC-CCCCCCCCCC
Q psy5326 119 MNN-PT----DP-VPPDFKNLEH 135 (157)
Q Consensus 119 ~n~-p~----~~-~~dd~s~~~h 135 (157)
++. ++ ++ ++||+|.-+.
T Consensus 90 ~~q~~~~~~~EIIvVDDgS~D~t 112 (501)
T 2ffu_A 90 LKKSPPHLIKEIILVDDYSNDPE 112 (501)
T ss_dssp HHHSCGGGEEEEEEEECSCSCTH
T ss_pred HhhCchhhceeEEEEECCCCchH
Confidence 974 43 22 8999997654
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.50 E-value=5.5e-16 Score=133.34 Aligned_cols=71 Identities=21% Similarity=0.367 Sum_probs=56.8
Q ss_pred hhcccCCCCCCCCCCCccccCcccCCCCCCceEEEEecCCCCCccccceeecccC-CCC-----CCCCCCCCCCCCC
Q psy5326 67 LSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIMNN-PTD-----PVPPDFKNLEHPP 137 (157)
Q Consensus 67 lSDrIsL~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAwStLLRtv~sv~n~-p~~-----~~~dd~s~~~h~~ 137 (157)
+||+||++|+|||+|++.|+.+.|+.++|.+||||++|||+|++|.|+++||++. ++. +++||+|.-+++.
T Consensus 1 ~s~~~~~~r~~~d~r~~~c~~~~~~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~ 77 (472)
T 1xhb_A 1 ASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLK 77 (472)
T ss_dssp -------CCCCCCCSCGGGGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGT
T ss_pred CCccccCCCCCCCCCChhhccCcCCcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHH
Confidence 6999999999999999999999999999999999999999999999999999974 332 2899999865443
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=97.38 E-value=3.5e-05 Score=68.14 Aligned_cols=88 Identities=9% Similarity=-0.090 Sum_probs=64.4
Q ss_pred ccCCCcchhHHHhhhhhcc----chhhhhc------ccCCCCCCCCCCCccccC------------cccCCCCCCceEEE
Q psy5326 44 GTLPGLTNDIITKIMKIEA----FNKVLSD------HISYTRKIPDARFPECHE------------LKYDEDLPTIGGFS 101 (157)
Q Consensus 44 v~L~~~e~~~~e~~~~~~~----FN~~lSD------rIsL~RslPD~R~~~Ck~------------~~Y~~~LPttSVII 101 (157)
..|+++++.+..+.+++++ .|+.+++ +.+++|..+......|.- ...+..+|.+||||
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~vsviI 99 (625)
T 2z86_A 20 ISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDYPRKQLIIDGLSIVI 99 (625)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCCCEECCCCCCCSSCTTCCTTCCCCCCCSSTTCHHHHHTCCCC-------CCCCCEEEEE
T ss_pred ccccchhHHHHHHHHHHHhhhccccccccccCCCCCCCcccCCCCCCCCCccccchhhhcccccCCCcccccCCcEEEEE
Confidence 3578888888788787777 7888777 778888877766655531 11236789999999
Q ss_pred EecCCCCCccccceeecccCC--CC---CCCCCCCC
Q psy5326 102 WSGHYTWIPIPDFDTRIMNNP--TD---PVPPDFKN 132 (157)
Q Consensus 102 ~FhNEAwStLLRtv~sv~n~p--~~---~~~dd~s~ 132 (157)
+.|||+ ..|.+++.|+.+.. .. +++||+|.
T Consensus 100 p~~n~~-~~l~~~l~sl~~q~~~~~~eiivvDd~s~ 134 (625)
T 2z86_A 100 PTYNRA-KILAITLACLCNQKTIYDYEVIVADDGSK 134 (625)
T ss_dssp EESSCH-HHHHHHHHHHHTCCCSSCEEEEEEEESCS
T ss_pred ecCCcH-HHHHHHHHHHHhhccCCCeEEEEEeCCCc
Confidence 999995 78889999998752 22 27888875
No 5
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=92.93 E-value=0.027 Score=42.50 Aligned_cols=39 Identities=8% Similarity=-0.018 Sum_probs=31.5
Q ss_pred CCCCceEEEEecCCCCCccccceeecccCC-CC---CCCCCCCC
Q psy5326 93 DLPTIGGFSWSGHYTWIPIPDFDTRIMNNP-TD---PVPPDFKN 132 (157)
Q Consensus 93 ~LPttSVII~FhNEAwStLLRtv~sv~n~p-~~---~~~dd~s~ 132 (157)
..|.+||||+.||++ ..|-+++.||++.. +. +++||+|.
T Consensus 3 ~~p~vsViIp~yn~~-~~l~~~l~Sl~~q~~~~~eiIvvDd~S~ 45 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVE-KYLDQCVQALLAQTLSDIEIILIDDESP 45 (240)
T ss_dssp CCCSEEEEEEESSCT-TTHHHHHHHHHTCSSSSEEEEEEECCCS
T ss_pred CCCcEEEEEecCCCH-HHHHHHHHHHHhCcCCCeEEEEEECCCC
Confidence 579999999999996 78889999998742 22 27899875
No 6
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=92.57 E-value=0.032 Score=42.59 Aligned_cols=37 Identities=16% Similarity=0.100 Sum_probs=30.0
Q ss_pred CCceEEEEecCCCCCccccceeecccCC-CC---CCCCCCCC
Q psy5326 95 PTIGGFSWSGHYTWIPIPDFDTRIMNNP-TD---PVPPDFKN 132 (157)
Q Consensus 95 PttSVII~FhNEAwStLLRtv~sv~n~p-~~---~~~dd~s~ 132 (157)
|.+||||+.||++ ..|.+++.||++.- +. +++||+|.
T Consensus 1 p~vSViIp~yn~~-~~l~~~l~Sl~~q~~~~~eiivvDd~S~ 41 (255)
T 1qg8_A 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSDFELFIMDDNSN 41 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCCCEEEEEEECSCC
T ss_pred CeEEEEEEcCCCH-HHHHHHHHHHHhccCCceEEEEEECCCC
Confidence 7899999999997 88889999998742 23 27899875
No 7
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=92.56 E-value=0.006 Score=52.49 Aligned_cols=97 Identities=11% Similarity=-0.030 Sum_probs=40.5
Q ss_pred cccCCCCCCCCccccCCCcch--hHHHhhhhhccchhhhhcccCCCCCCCCCCCccccCcccCCCCCCceEEEEecCCCC
Q psy5326 31 DKIIPGLGENGRAGTLPGLTN--DIITKIMKIEAFNKVLSDHISYTRKIPDARFPECHELKYDEDLPTIGGFSWSGHYTW 108 (157)
Q Consensus 31 ~~~~~gpGE~G~~v~L~~~e~--~~~e~~~~~~~FN~~lSDrIsL~RslPD~R~~~Ck~~~Y~~~LPttSVII~FhNEAw 108 (157)
....-++|+.++++..-..+. ...+.......++.|++.+....+..+-.+...+.. ...|.+||||..|||+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~l~~~~~----~~~p~vSVVIP~yNe~- 106 (387)
T 3f1y_A 32 DSPDLGTDDDDKAMADIGSEFMSTYHERPLGPASAAEWFRQRSYDYGQFPPEDLARRKR----ELGLTVSAVLPSRNVA- 106 (387)
T ss_dssp ------------------------------CCSSHHHHHHHHEEEGGGSCHHHHHHHHH----HHTCCEEEEEEESSCT-
T ss_pred CCccCCCCchhHHHHhhhhhhccccccccCCHHHHHHHHHhcCCcccCCCHHHHHhhhh----cCCCeEEEEEEcCCCH-
Confidence 334566778888776432221 122333345566677664333222222111111111 2368999999999996
Q ss_pred Cccccceeeccc----CCCC---CCCCCCCC
Q psy5326 109 IPIPDFDTRIMN----NPTD---PVPPDFKN 132 (157)
Q Consensus 109 StLLRtv~sv~n----~p~~---~~~dd~s~ 132 (157)
.+|-+++.||.+ .+.. +++||+|.
T Consensus 107 ~~l~~~l~sl~~~l~~~~~~~EIIVVDDgSt 137 (387)
T 3f1y_A 107 DTVGGIIDEIHALNERAPLIDQILVVDADSE 137 (387)
T ss_dssp TTHHHHHHHHHHHHHHSCCCSEEEEEECSCS
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEcCcCC
Confidence 677777777764 3433 28999985
No 8
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=87.31 E-value=0.16 Score=41.59 Aligned_cols=39 Identities=13% Similarity=-0.229 Sum_probs=31.0
Q ss_pred CCCCceEEEEecCCCCCccccceeecccC--CC--C-CCCCCCCC
Q psy5326 93 DLPTIGGFSWSGHYTWIPIPDFDTRIMNN--PT--D-PVPPDFKN 132 (157)
Q Consensus 93 ~LPttSVII~FhNEAwStLLRtv~sv~n~--p~--~-~~~dd~s~ 132 (157)
..|.+||||..|||+ ..|-+++.||++. +. + +++||+|.
T Consensus 46 ~~~~vSViIp~yN~~-~~l~~~l~sl~~q~~~~~~eiivVDdgS~ 89 (329)
T 3ckj_A 46 AGRTISVVLPALDEE-DTIGSVIDSISPLVDGLVDELIVLDSGST 89 (329)
T ss_dssp TTCCEEEEEEESSCT-TTHHHHHHHHGGGBTTTBSEEEEEECSCC
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHhhCCCCcEEEEEeCCCC
Confidence 468999999999987 6788888899874 32 2 28999985
No 9
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=84.59 E-value=0.19 Score=45.69 Aligned_cols=38 Identities=8% Similarity=-0.127 Sum_probs=0.0
Q ss_pred CCCceEEEEecCCCCCccccceeecccCC-C--C-CCCCCCCC
Q psy5326 94 LPTIGGFSWSGHYTWIPIPDFDTRIMNNP-T--D-PVPPDFKN 132 (157)
Q Consensus 94 LPttSVII~FhNEAwStLLRtv~sv~n~p-~--~-~~~dd~s~ 132 (157)
||.+||||..||++ ..|-+++.||++.. + + +++||+|.
T Consensus 1 Mp~vSVIIp~yN~~-~~L~~~L~Sll~Qt~~~~EIIVVDDgSt 42 (729)
T 3l7i_A 1 MNKLTIIVTYYNAE-EYITGCLESIKQQRTQDFNLIIVNDGST 42 (729)
T ss_dssp -------------------------------------------
T ss_pred CceEEEEEEcCCCH-HHHHHHHHHHHhCCCCCeEEEEEECCCC
Confidence 68999999999996 78888999999852 2 2 38999984
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=81.35 E-value=0.56 Score=41.19 Aligned_cols=40 Identities=15% Similarity=0.050 Sum_probs=31.6
Q ss_pred CCCCCceEEEEecCCCCCccccceeecccC-CCC---CCCCCCCC
Q psy5326 92 EDLPTIGGFSWSGHYTWIPIPDFDTRIMNN-PTD---PVPPDFKN 132 (157)
Q Consensus 92 ~~LPttSVII~FhNEAwStLLRtv~sv~n~-p~~---~~~dd~s~ 132 (157)
...|.+||||+-||++ ..|.+++.||++. -++ +++||+|.
T Consensus 372 ~~~~~vsiii~~yn~~-~~l~~~l~s~~~q~~~~~eiivvdd~S~ 415 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCS-KYIVRCVESALNQTITDLEVCICDDGST 415 (625)
T ss_dssp CSSCSEEEEEEESSCT-TTHHHHHHHHHSSSCCSEEEEEEEESCS
T ss_pred ccCCeEEEEEeCCCCH-HHHHHHHHHHHhCcCCCeEEEEEECcCC
Confidence 4578999999999994 7888899999874 222 27899875
No 11
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=79.92 E-value=0.38 Score=44.75 Aligned_cols=42 Identities=19% Similarity=-0.008 Sum_probs=33.6
Q ss_pred CCCCCCceEEEEecCCCCCccccceeeccc--CCCC----CCCCCCCC
Q psy5326 91 DEDLPTIGGFSWSGHYTWIPIPDFDTRIMN--NPTD----PVPPDFKN 132 (157)
Q Consensus 91 ~~~LPttSVII~FhNEAwStLLRtv~sv~n--~p~~----~~~dd~s~ 132 (157)
++++|.+||||.-|||+-..+-+++.|+++ .|.+ +++||+|.
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgSt 183 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGT 183 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCH
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCC
Confidence 477899999999999988666778888876 3543 38999874
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=62.95 E-value=1.5 Score=35.99 Aligned_cols=46 Identities=7% Similarity=-0.109 Sum_probs=30.4
Q ss_pred CCCccccCcccCCCCCCceEEEEecCCCCCccccceeecc---c-CCCC---CCCCCCCC
Q psy5326 80 ARFPECHELKYDEDLPTIGGFSWSGHYTWIPIPDFDTRIM---N-NPTD---PVPPDFKN 132 (157)
Q Consensus 80 ~R~~~Ck~~~Y~~~LPttSVII~FhNEAwStLLRtv~sv~---n-~p~~---~~~dd~s~ 132 (157)
.+++.|.. .|.+||||.+||++ ..|.+++.|+. + +-.+ +++||-++
T Consensus 56 ~~p~~c~~------~~~VSIIIP~yN~~-~~L~~~L~sl~~~l~q~~~~~EIiVVdds~d 108 (287)
T 2fy7_A 56 YAPRDCVS------PHKVAIIIPFRNRQ-EHLKYWLYYLHPVLQRQQLDYGIYVINQAGD 108 (287)
T ss_dssp ECCSSSBC------SCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTCEEEEEEEEECSS
T ss_pred CcCCCCCc------CCcEEEEEeeCCCH-HHHHHHHHHHHHHHHHhcCCceEEEEEeCCC
Confidence 34456654 58999999999984 56777777776 2 2222 27777443
No 13
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=45.83 E-value=1.3 Score=40.43 Aligned_cols=40 Identities=10% Similarity=-0.081 Sum_probs=30.7
Q ss_pred CCCCceEEEEecCCCCCccccceeecccCC-----C-C-CCCCCCCCC
Q psy5326 93 DLPTIGGFSWSGHYTWIPIPDFDTRIMNNP-----T-D-PVPPDFKNL 133 (157)
Q Consensus 93 ~LPttSVII~FhNEAwStLLRtv~sv~n~p-----~-~-~~~dd~s~~ 133 (157)
.-|.+||||+-||++ ..|.+++.||.+.. . + +++||+|.-
T Consensus 178 ~~pkVSVVIptYN~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD 224 (657)
T 4fix_A 178 GTANIAVGIPTFNRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERK 224 (657)
T ss_dssp SCCCEEEECCBSSCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSC
T ss_pred CCCeEEEEEEecCCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCC
Confidence 348999999999984 57778888998742 2 2 389999853
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=35.59 E-value=4.6 Score=31.36 Aligned_cols=46 Identities=7% Similarity=-0.094 Sum_probs=25.9
Q ss_pred ccCcccC-CCCCCceEEEEecCCCCCccccceeeccc---CCC--CC-CCCCCCC
Q psy5326 85 CHELKYD-EDLPTIGGFSWSGHYTWIPIPDFDTRIMN---NPT--DP-VPPDFKN 132 (157)
Q Consensus 85 Ck~~~Y~-~~LPttSVII~FhNEAwStLLRtv~sv~n---~p~--~~-~~dd~s~ 132 (157)
|.+..+. .+.|.+|||++ ||+ ...|-+++.|+.. ++. +. ++|+.|.
T Consensus 5 ~~~~~~~~~~~~~iSII~~-yN~-~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~ 57 (249)
T 2nxv_A 5 PTYVQDKDESTLMFSVCSL-VRD-QAKYDRLLESFERFGFTPDKAEFLAADNREG 57 (249)
T ss_dssp CEEECSCCCCCCSEEEEEE-ESC-HHHHHHHHHHHHHTTCCTTTEEEEEEECTTS
T ss_pred cccccCccCCcceEEEEEe-eCC-HHHHHHHHHHHHHhccCCCcEEEEEEECCCC
Confidence 3334443 44678998766 887 4666676664432 122 22 6777653
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=22.98 E-value=8.2 Score=33.24 Aligned_cols=34 Identities=6% Similarity=-0.242 Sum_probs=18.4
Q ss_pred eEEEEecCCCCCccccceeecccCC-CC-CCCCCCC
Q psy5326 98 GGFSWSGHYTWIPIPDFDTRIMNNP-TD-PVPPDFK 131 (157)
Q Consensus 98 SVII~FhNEAwStLLRtv~sv~n~p-~~-~~~dd~s 131 (157)
-|||.|+||....+++.+......| .+ +++||+|
T Consensus 3 lVIiP~~eE~I~~vl~~l~~~~~~~~~EIIVVDDGS 38 (397)
T 2bo4_A 3 LVVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYE 38 (397)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESS
T ss_pred EEEEeCCccCHHHHHHHHHHhccCCCeEEEEEECcC
Confidence 4677887875444443332222233 23 3799987
No 16
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=20.27 E-value=26 Score=29.65 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=27.7
Q ss_pred CCCceEEEEecCCCCCccccceeeccc-CCCC---C--CCCCCCC
Q psy5326 94 LPTIGGFSWSGHYTWIPIPDFDTRIMN-NPTD---P--VPPDFKN 132 (157)
Q Consensus 94 LPttSVII~FhNEAwStLLRtv~sv~n-~p~~---~--~~dd~s~ 132 (157)
|+.++|||..||-. . |-|++-|+.+ +|.. . +-||++.
T Consensus 1 ~~~~pViI~~yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~ 43 (343)
T 1fo8_A 1 LAVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGH 43 (343)
T ss_dssp CCCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTC
T ss_pred CCcccEEEEECCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCC
Confidence 67899999999997 5 7788888886 3432 2 5678764
Done!