Query psy5328
Match_columns 76
No_of_seqs 150 out of 1079
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 23:48:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5328.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5328hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ffu_A Ppgalnact-2, polypeptid 99.8 1.2E-18 4.2E-23 127.7 8.5 71 1-71 48-118 (501)
2 1xhb_A Polypeptide N-acetylgal 99.8 8.4E-19 2.9E-23 127.2 7.2 66 1-66 11-77 (472)
3 2d7i_A Polypeptide N-acetylgal 99.7 3.3E-18 1.1E-22 128.2 6.6 70 1-70 94-163 (570)
4 3bcv_A Putative glycosyltransf 99.4 1.4E-13 4.9E-18 90.3 6.4 50 17-69 3-52 (240)
5 1qg8_A Protein (spore coat pol 99.4 4.5E-13 1.5E-17 88.8 5.6 49 19-70 1-49 (255)
6 3ckj_A Putative uncharacterize 99.4 1E-12 3.5E-17 92.1 6.9 51 17-69 46-96 (329)
7 3f1y_A Mannosyl-3-phosphoglyce 99.2 9.8E-12 3.3E-16 90.3 5.9 49 18-69 93-144 (387)
8 2z86_A Chondroitin synthase; G 99.2 1.8E-11 6.2E-16 91.1 6.9 52 16-70 372-423 (625)
9 3l7i_A Teichoic acid biosynthe 99.2 2.4E-12 8.1E-17 98.3 0.0 50 18-70 1-50 (729)
10 2z86_A Chondroitin synthase; G 99.1 2.6E-10 9.1E-15 84.8 6.9 53 16-70 90-142 (625)
11 4hg6_A Cellulose synthase subu 99.0 1.3E-10 4.5E-15 90.3 4.9 51 16-66 137-187 (802)
12 2wvl_A Mannosyl-3-phosphoglyce 98.9 7.7E-10 2.6E-14 81.3 5.1 42 19-66 53-94 (391)
13 2zu9_A Mannosyl-3-phosphoglyce 98.8 4.4E-09 1.5E-13 77.4 6.0 40 20-65 52-91 (394)
14 2fy7_A Beta-1,4-galactosyltran 98.8 1.5E-08 5.1E-13 71.0 6.3 43 17-62 63-108 (287)
15 4fix_A UDP-galactofuranosyl tr 98.8 3.6E-09 1.2E-13 81.2 3.2 48 17-65 178-226 (657)
16 2bo4_A Mannosylglycerate synth 98.6 3.3E-08 1.1E-12 72.3 4.5 44 23-70 4-47 (397)
17 2nxv_A ATP synthase subunits r 98.4 7.2E-07 2.5E-11 60.1 6.6 45 16-63 13-58 (249)
18 1fo8_A Alpha-1,3-mannosyl-glyc 97.7 4.3E-05 1.5E-09 55.0 4.7 48 19-68 2-49 (343)
19 3lw6_A FI08434P, beta-4-galact 94.5 0.069 2.3E-06 37.9 5.3 49 4-60 42-92 (287)
20 1s4n_A Glycolipid 2-alpha-mann 86.9 0.87 3E-05 33.0 4.5 54 18-71 26-79 (348)
21 1k3r_A Conserved protein MT000 83.6 2.5 8.6E-05 29.5 5.4 55 19-76 4-67 (268)
22 2d0j_A Galactosylgalactosylxyl 64.7 22 0.00076 24.4 6.1 50 18-71 2-54 (246)
23 1v84_A Galactosylgalactosylxyl 49.9 47 0.0016 22.8 5.8 50 18-71 2-54 (253)
24 3cu0_A Galactosylgalactosylxyl 44.5 59 0.002 22.8 5.6 52 16-71 18-72 (281)
25 4emt_A Transmembrane protein 1 41.6 6.2 0.00021 26.3 0.3 44 32-75 135-182 (188)
26 4ef4_A Transmembrane protein 1 37.8 8.6 0.00029 26.9 0.5 43 32-74 174-220 (265)
27 1nul_A XPRT, xanthine-guanine 24.9 28 0.00094 21.2 1.2 22 52-73 82-104 (152)
28 3brq_A HTH-type transcriptiona 24.6 95 0.0033 19.5 3.8 39 19-61 20-61 (296)
29 1wd5_A Hypothetical protein TT 22.2 22 0.00076 22.7 0.4 21 51-71 120-141 (208)
30 3cc1_A BH1870 protein, putativ 22.1 27 0.00093 25.2 0.8 27 33-60 29-55 (433)
No 1
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.76 E-value=1.2e-18 Score=127.66 Aligned_cols=71 Identities=35% Similarity=0.604 Sum_probs=64.2
Q ss_pred CCCcCcccccccccCCCCCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhhcc
Q psy5328 1 MVGHSLLRCHELKYDEDLPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAFRQ 71 (76)
Q Consensus 1 ~~d~R~~~c~~~~y~~~~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~~~ 71 (76)
+||+|+..|..+.|...+|.+|||||+|||+.+.|.++|.|++++++....+|||+|||||+|+|++..++
T Consensus 48 ~~d~r~~~~~~~~~~~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~ 118 (501)
T 2ffu_A 48 IPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLG 118 (501)
T ss_dssp CCCCSCGGGGGCCCCSSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGG
T ss_pred CCCCChhHhccccCCcCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHh
Confidence 69999999999999999999999999999985599999999999998654579999999999999876654
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.76 E-value=8.4e-19 Score=127.16 Aligned_cols=66 Identities=39% Similarity=0.736 Sum_probs=60.5
Q ss_pred CCCcCcccccccccCCCCCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCc-ch
Q psy5328 1 MVGHSLLRCHELKYDEDLPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKY-GV 66 (76)
Q Consensus 1 ~~d~R~~~c~~~~y~~~~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~-tl 66 (76)
+||+|+..|..+.|...+|.+|||||+|||+++.|.++|.|+++++++...+|||+|||||+|+ |.
T Consensus 11 ~~d~r~~~c~~~~~~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~ 77 (472)
T 1xhb_A 11 LPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLK 77 (472)
T ss_dssp CCCCSCGGGGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGT
T ss_pred CCCCCChhhccCcCCcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHH
Confidence 6999999999999999999999999999998679999999999998865457999999999996 54
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.73 E-value=3.3e-18 Score=128.16 Aligned_cols=70 Identities=37% Similarity=0.620 Sum_probs=62.6
Q ss_pred CCCcCcccccccccCCCCCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhhc
Q psy5328 1 MVGHSLLRCHELKYDEDLPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAFR 70 (76)
Q Consensus 1 ~~d~R~~~c~~~~y~~~~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~~ 70 (76)
+||+|+..|....|...+|.+|||||+|||+++.|.++|.|++++++..+.+|||+|||||+|+|+.+.+
T Consensus 94 ~~d~r~~~~~~~~~~~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l 163 (570)
T 2d7i_A 94 LPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPL 163 (570)
T ss_dssp CCCCSCGGGGTCCEESSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHH
T ss_pred CCCCCCccceecccCCCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHH
Confidence 6899999999999998899999999999998679999999999999875557999999999999954333
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.45 E-value=1.4e-13 Score=90.30 Aligned_cols=50 Identities=30% Similarity=0.270 Sum_probs=44.0
Q ss_pred CCCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhh
Q psy5328 17 DLPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAF 69 (76)
Q Consensus 17 ~~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~ 69 (76)
.+|.+|||||+||++ ..|.++|.|+++|+.. .+|||+|||||+|+|.+.+
T Consensus 3 ~~p~vsViIp~yn~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~ 52 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKIC 52 (240)
T ss_dssp CCCSEEEEEEESSCT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHH
T ss_pred CCCcEEEEEecCCCH-HHHHHHHHHHHhCcCC--CeEEEEEECCCCcCHHHHH
Confidence 368999999999997 6999999999999876 4799999999999986543
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.39 E-value=4.5e-13 Score=88.81 Aligned_cols=49 Identities=29% Similarity=0.411 Sum_probs=43.4
Q ss_pred CcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhhc
Q psy5328 19 PTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAFR 70 (76)
Q Consensus 19 p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~~ 70 (76)
|.+|||||+||++ ..|.++|.|+++|+.+ .+|||+|||||+|+|.+.+-
T Consensus 1 p~vSViIp~yn~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~~ 49 (255)
T 1qg8_A 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVIR 49 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHHG
T ss_pred CeEEEEEEcCCCH-HHHHHHHHHHHhccCC--ceEEEEEECCCCchHHHHHH
Confidence 5799999999997 7999999999999876 47999999999999976543
No 6
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.37 E-value=1e-12 Score=92.11 Aligned_cols=51 Identities=16% Similarity=0.077 Sum_probs=44.2
Q ss_pred CCCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhh
Q psy5328 17 DLPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAF 69 (76)
Q Consensus 17 ~~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~ 69 (76)
.+|.+|||||+||++ ..|.++|.|+++|+++. .+|||+|||||+|+|.+..
T Consensus 46 ~~~~vSViIp~yN~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~ 96 (329)
T 3ckj_A 46 AGRTISVVLPALDEE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRA 96 (329)
T ss_dssp TTCCEEEEEEESSCT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHH
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHH
Confidence 457899999999997 69999999999998652 4799999999999997654
No 7
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.24 E-value=9.8e-12 Score=90.26 Aligned_cols=49 Identities=24% Similarity=0.232 Sum_probs=39.8
Q ss_pred CCcEEEEEeeecCCchHHHHHHHHHHh---hCCCCCceEEEEEeCCCCCcchHhh
Q psy5328 18 LPTVSVIIIFTNEAWSPLIRTILTTLM---RTPDKLLHEVLLIDDASDKYGVGAF 69 (76)
Q Consensus 18 ~p~vSVVip~~NE~~~~L~~~l~svl~---~~~~~~~~EiI~VDDgS~D~tl~~~ 69 (76)
.|.+|||||+|||+ ..|.++|.++.+ +.+. .+|||+|||||+|+|.+..
T Consensus 93 ~p~vSVVIP~yNe~-~~l~~~l~sl~~~l~~~~~--~~EIIVVDDgStD~T~~i~ 144 (387)
T 3f1y_A 93 GLTVSAVLPSRNVA-DTVGGIIDEIHALNERAPL--IDQILVVDADSEDGTAGVA 144 (387)
T ss_dssp TCCEEEEEEESSCT-TTHHHHHHHHHHHHHHSCC--CSEEEEEECSCSSSHHHHH
T ss_pred CCeEEEEEEcCCCH-HHHHHHHHHHHHHHhcCCC--CeEEEEEcCcCCccHHHHH
Confidence 47899999999997 578888887765 4443 4699999999999997654
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.22 E-value=1.8e-11 Score=91.12 Aligned_cols=52 Identities=25% Similarity=0.273 Sum_probs=45.2
Q ss_pred CCCCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhhc
Q psy5328 16 EDLPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAFR 70 (76)
Q Consensus 16 ~~~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~~ 70 (76)
+.+|.+|||||+||++ ..|.++|.|+++|++. .+|||+|||||+|+|.+.+.
T Consensus 372 ~~~~~vsiii~~yn~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~ 423 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQ 423 (625)
T ss_dssp CSSCSEEEEEEESSCT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHH
T ss_pred ccCCeEEEEEeCCCCH-HHHHHHHHHHHhCcCC--CeEEEEEECcCChhHHHHHH
Confidence 3467899999999997 6999999999999876 47999999999999976543
No 9
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.17 E-value=2.4e-12 Score=98.30 Aligned_cols=50 Identities=8% Similarity=0.223 Sum_probs=0.0
Q ss_pred CCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhhc
Q psy5328 18 LPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAFR 70 (76)
Q Consensus 18 ~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~~ 70 (76)
||.+|||||+||++ ..|.++|.|+++|+.. .+|||+|||||+|+|.+.+-
T Consensus 1 Mp~vSVIIp~yN~~-~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~ 50 (729)
T 3l7i_A 1 MNKLTIIVTYYNAE-EYITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMD 50 (729)
T ss_dssp -----------------------------------------------------
T ss_pred CceEEEEEEcCCCH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCCcHHHHHH
Confidence 68899999999997 6999999999999876 46999999999999975443
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.06 E-value=2.6e-10 Score=84.83 Aligned_cols=53 Identities=23% Similarity=0.097 Sum_probs=44.7
Q ss_pred CCCCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhhc
Q psy5328 16 EDLPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAFR 70 (76)
Q Consensus 16 ~~~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~~ 70 (76)
..+|.+|||||+||++ ..|.++|.|+++++... .+|||+|||||+|+|.+.+.
T Consensus 90 ~~~p~vsviIp~~n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~ 142 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVR 142 (625)
T ss_dssp CCCCCEEEEEEESSCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHH
T ss_pred ccCCcEEEEEecCCcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHH
Confidence 4468999999999996 79999999999986542 57999999999999865543
No 11
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.05 E-value=1.3e-10 Score=90.26 Aligned_cols=51 Identities=27% Similarity=0.272 Sum_probs=43.4
Q ss_pred CCCCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcch
Q psy5328 16 EDLPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGV 66 (76)
Q Consensus 16 ~~~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl 66 (76)
...|.+|||||+|||+...+.+++.|+++|+++...+||++|||||+|+|.
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~ 187 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRC 187 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHH
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccc
Confidence 456899999999999853458899999999877534799999999999994
No 12
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=98.94 E-value=7.7e-10 Score=81.29 Aligned_cols=42 Identities=14% Similarity=0.187 Sum_probs=36.7
Q ss_pred CcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcch
Q psy5328 19 PTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGV 66 (76)
Q Consensus 19 p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl 66 (76)
..+|||||+|||+. +.+.++++|++.. +|||+|||||+|.|.
T Consensus 53 ~klSIVVPvYNEe~----~lLesVl~qi~~d--~eIIlVdDGS~D~s~ 94 (391)
T 2wvl_A 53 EQTAIVVPTRNERL----KLLEGVLSGIPHE--ALILVASNSSPDRFQ 94 (391)
T ss_dssp TTEEEEEEESSCCH----HHHHHHHHTSCTT--SEEEEEECCCHHHHH
T ss_pred hceEEEEeccCcHH----HHHHHHHhcCCCC--ceEEEEECCCCCChH
Confidence 36999999999984 4599999999874 699999999999994
No 13
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.84 E-value=4.4e-09 Score=77.42 Aligned_cols=40 Identities=18% Similarity=0.302 Sum_probs=32.8
Q ss_pred cEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcc
Q psy5328 20 TVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYG 65 (76)
Q Consensus 20 ~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~t 65 (76)
.+|||||+|||+. .+ |..++.+.+. .+|||+|||||+|+|
T Consensus 52 ~iSVVIP~yNEE~-~l---I~~vL~~i~~--~~eIIvVDDgSrD~t 91 (394)
T 2zu9_A 52 KMAVIVPMKNEKL-HL---VDGVLKAIPH--KCPIIIVSNSKREGP 91 (394)
T ss_dssp TEEEEEEESSCCH-HH---HHHHHHHSCT--TSCEEEEECCCCSSS
T ss_pred CEEEEEecCcccH-HH---HHHHHHcCCC--CcEEEEEECcCcccc
Confidence 6999999999983 33 6677777654 479999999998887
No 14
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=98.76 E-value=1.5e-08 Score=70.95 Aligned_cols=43 Identities=23% Similarity=0.206 Sum_probs=35.6
Q ss_pred CCCcEEEEEeeecCCchHHHHHHHHHH---hhCCCCCceEEEEEeCCCC
Q psy5328 17 DLPTVSVIIIFTNEAWSPLIRTILTTL---MRTPDKLLHEVLLIDDASD 62 (76)
Q Consensus 17 ~~p~vSVVip~~NE~~~~L~~~l~svl---~~~~~~~~~EiI~VDDgS~ 62 (76)
..|.+|||||+||++ ..|.++|.|++ +++.. .+|||+|||+++
T Consensus 63 ~~~~VSIIIP~yN~~-~~L~~~L~sl~~~l~q~~~--~~EIiVVdds~d 108 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQ-EHLKYWLYYLHPVLQRQQL--DYGIYVINQAGD 108 (287)
T ss_dssp CSCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTC--EEEEEEEEECSS
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHHHHHhcC--CceEEEEEeCCC
Confidence 357899999999997 68999999988 56654 579999999544
No 15
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.75 E-value=3.6e-09 Score=81.15 Aligned_cols=48 Identities=13% Similarity=0.114 Sum_probs=39.4
Q ss_pred CCCcEEEEEeeecCCchHHHHHHHHHHhhCCC-CCceEEEEEeCCCCCcc
Q psy5328 17 DLPTVSVIIIFTNEAWSPLIRTILTTLMRTPD-KLLHEVLLIDDASDKYG 65 (76)
Q Consensus 17 ~~p~vSVVip~~NE~~~~L~~~l~svl~~~~~-~~~~EiI~VDDgS~D~t 65 (76)
..|.+|||||.||++ ..|.++|.|+++|+.. ...+|||+|||||+|++
T Consensus 178 ~~pkVSVVIptYN~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s 226 (657)
T 4fix_A 178 GTANIAVGIPTFNRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVR 226 (657)
T ss_dssp SCCCEEEECCBSSCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGG
T ss_pred CCCeEEEEEEecCCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCcc
Confidence 347899999999997 6999999999988641 11469999999999853
No 16
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.61 E-value=3.3e-08 Score=72.27 Aligned_cols=44 Identities=14% Similarity=0.054 Sum_probs=27.9
Q ss_pred EEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhhc
Q psy5328 23 VIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAFR 70 (76)
Q Consensus 23 VVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~~ 70 (76)
||||++||....+++.+..... .+ .+|||+|||||+|+|.+...
T Consensus 4 VIiP~~eE~I~~vl~~l~~~~~--~~--~~EIIVVDDGStD~T~eia~ 47 (397)
T 2bo4_A 4 VVFPFKHEHPEVLLHNVRVAAA--HP--RVHEVLCIGYERDQTYEAVE 47 (397)
T ss_dssp EEEECCSSCHHHHHHHHHHHHH--ST--TCCEEEEEESSCCHHHHHHH
T ss_pred EEEeCCccCHHHHHHHHHHhcc--CC--CeEEEEEECcCCccHHHHHH
Confidence 5666666544444444433222 22 35999999999999986654
No 17
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=98.40 E-value=7.2e-07 Score=60.07 Aligned_cols=45 Identities=16% Similarity=0.034 Sum_probs=33.6
Q ss_pred CCCCcEEEEEeeecCCchHHHHHHHHHHhhCC-CCCceEEEEEeCCCCC
Q psy5328 16 EDLPTVSVIIIFTNEAWSPLIRTILTTLMRTP-DKLLHEVLLIDDASDK 63 (76)
Q Consensus 16 ~~~p~vSVVip~~NE~~~~L~~~l~svl~~~~-~~~~~EiI~VDDgS~D 63 (76)
++.+.+||| |+||++ ..|.++|.|+.+... +.. +|||+|||||+|
T Consensus 13 ~~~~~iSII-~~yN~~-~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d 58 (249)
T 2nxv_A 13 ESTLMFSVC-SLVRDQ-AKYDRLLESFERFGFTPDK-AEFLAADNREGN 58 (249)
T ss_dssp CCCCSEEEE-EEESCH-HHHHHHHHHHHHTTCCTTT-EEEEEEECTTSC
T ss_pred CCcceEEEE-EeeCCH-HHHHHHHHHHHHhccCCCc-EEEEEEECCCCC
Confidence 345679975 679995 688899997765322 222 799999999998
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.69 E-value=4.3e-05 Score=55.00 Aligned_cols=48 Identities=13% Similarity=0.271 Sum_probs=40.0
Q ss_pred CcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHh
Q psy5328 19 PTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGA 68 (76)
Q Consensus 19 p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~ 68 (76)
+.++|||++||.. . |.++|.|++++.+....++||+.||||..++.+.
T Consensus 2 ~~~pViI~~yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~v 49 (343)
T 1fo8_A 2 AVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQV 49 (343)
T ss_dssp CCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHH
T ss_pred CcccEEEEECCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHH
Confidence 4689999999996 5 9999999999986544579999999998777544
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=94.50 E-value=0.069 Score=37.89 Aligned_cols=49 Identities=8% Similarity=0.243 Sum_probs=33.6
Q ss_pred cCcccccccccCCCCCcEEEEEeeecCCc--hHHHHHHHHHHhhCCCCCceEEEEEeCC
Q psy5328 4 HSLLRCHELKYDEDLPTVSVIIIFTNEAW--SPLIRTILTTLMRTPDKLLHEVLLIDDA 60 (76)
Q Consensus 4 ~R~~~c~~~~y~~~~p~vSVVip~~NE~~--~~L~~~l~svl~~~~~~~~~EiI~VDDg 60 (76)
+++.+|. ..-++.||||+.|.+. ..++..++..|++.. ..+.|++|+-.
T Consensus 42 ~~P~~c~------~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~--l~y~I~VieQ~ 92 (287)
T 3lw6_A 42 YTPMDGA------SVHKMALLVPFRDRFEELLQFVPHMTAFLKRQG--VAHHIFVLNQV 92 (287)
T ss_dssp -----CC------CCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT--CEEEEEEEEEC
T ss_pred ECCCccC------CcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcC--CceEEEEEecC
Confidence 4566666 2237999999999873 477778888998864 46799999874
No 20
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=86.90 E-value=0.87 Score=33.02 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=45.7
Q ss_pred CCcEEEEEeeecCCchHHHHHHHHHHhhCCCCCceEEEEEeCCCCCcchHhhcc
Q psy5328 18 LPTVSVIIIFTNEAWSPLIRTILTTLMRTPDKLLHEVLLIDDASDKYGVGAFRQ 71 (76)
Q Consensus 18 ~p~vSVVip~~NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~tl~~~~~ 71 (76)
.+..++|+-+.|++...++++|.++-.+-...+.+-.|++||.--++..+...+
T Consensus 26 r~nAtfV~L~RN~el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~ 79 (348)
T 1s4n_A 26 KPKACYVTLVRNKELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVT 79 (348)
T ss_dssp CCCEEEEEECCGGGHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHH
T ss_pred CCceEEEEEeccHHHHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHH
Confidence 357999999999988899999999998877767889999999988887766544
No 21
>1k3r_A Conserved protein MT0001; beta barrel, structural genomics, PSI; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.40.4.10 c.116.1.2
Probab=83.60 E-value=2.5 Score=29.45 Aligned_cols=55 Identities=15% Similarity=0.095 Sum_probs=32.9
Q ss_pred CcEEEEEee--ecCCch-----HHHHHHHHHHhhCCCCCceEEEEEeCCCCCc--chHhhcccCCCC
Q psy5328 19 PTVSVIIIF--TNEAWS-----PLIRTILTTLMRTPDKLLHEVLLIDDASDKY--GVGAFRQPLNQP 76 (76)
Q Consensus 19 p~vSVVip~--~NE~~~-----~L~~~l~svl~~~~~~~~~EiI~VDDgS~D~--tl~~~~~~~~~~ 76 (76)
.++||.||- -+++.+ .+...|...+.-.. .-|||+-||+..++ .++.+|++++-|
T Consensus 4 ~t~SIaIP~Sil~~a~s~e~kT~~~gqIARAaaIF~---VdEIvVy~d~~~~~~~~l~~iL~YleTP 67 (268)
T 1k3r_A 4 VDLSLFIPDSLTAETGDLKIKTYKVVLIARAASIFG---VKRIVIYHDDADGEARFIRDILTYMDTP 67 (268)
T ss_dssp CEEEEEEETTTTTTCCCHHHHHHHHHHHHHHHHHTT---CCEEEEEECSSCCCHHHHHHHHHHHHSC
T ss_pred eEEEEEechHHhccCCCHHHHHHHHHHHHHHHHhcc---ccEEEEEeCCCCCHHHHHHHHHHHhcCC
Confidence 369999996 344421 22223333333222 34999999976444 468888887755
No 22
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=64.69 E-value=22 Score=24.39 Aligned_cols=50 Identities=24% Similarity=0.316 Sum_probs=32.8
Q ss_pred CCcEEEEEeeecCCc--hHHHHHHHHHHhhCCCCCceEEEEEeCCCCC-cchHhhcc
Q psy5328 18 LPTVSVIIIFTNEAW--SPLIRTILTTLMRTPDKLLHEVLLIDDASDK-YGVGAFRQ 71 (76)
Q Consensus 18 ~p~vSVVip~~NE~~--~~L~~~l~svl~~~~~~~~~EiI~VDDgS~D-~tl~~~~~ 71 (76)
+|.+=||-|.|.... ..|.| +...|...+. .-.|+|+||..- .....+|+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtR-La~TL~~Vp~---l~WIVVEd~~~~~~~v~~lL~ 54 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTR-LANTFRQVAQ---LHWILVEDAAARSELVSRFLA 54 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHH-HHHHHTTSTT---EEEEEEESSSSCCHHHHHHHH
T ss_pred CCEEEEEeCCCCccchhHHHHH-HHHHHhcCCc---eEEEEEcCCCCCCHHHHHHHH
Confidence 688999999998864 24444 4444445553 378999998753 33455554
No 23
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=49.94 E-value=47 Score=22.82 Aligned_cols=50 Identities=22% Similarity=0.284 Sum_probs=31.9
Q ss_pred CCcEEEEEeeecCCc--hHHHHHHHHHHhhCCCCCceEEEEEeCCCC-CcchHhhcc
Q psy5328 18 LPTVSVIIIFTNEAW--SPLIRTILTTLMRTPDKLLHEVLLIDDASD-KYGVGAFRQ 71 (76)
Q Consensus 18 ~p~vSVVip~~NE~~--~~L~~~l~svl~~~~~~~~~EiI~VDDgS~-D~tl~~~~~ 71 (76)
+|.+=||-|.|.... ..|.|.-+.+ ...++ .-.|+|+|+.. -.....+|+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~Vp~---L~WIVVEd~~~~t~~va~lL~ 54 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTL-LHVPN---LHWLVVEDAPRRTPLTARLLR 54 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TTSSS---EEEEEEESSSSCCHHHHHHHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhh-ccCCc---eEEEEEeCCCCCCHHHHHHHH
Confidence 588999999998863 3555544444 44443 37899999753 333444443
No 24
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=44.49 E-value=59 Score=22.77 Aligned_cols=52 Identities=23% Similarity=0.199 Sum_probs=31.4
Q ss_pred CCCCcEEEEEeeecCCc--hHHHHHHHHHHhhCCCCCceEEEEEeCCC-CCcchHhhcc
Q psy5328 16 EDLPTVSVIIIFTNEAW--SPLIRTILTTLMRTPDKLLHEVLLIDDAS-DKYGVGAFRQ 71 (76)
Q Consensus 16 ~~~p~vSVVip~~NE~~--~~L~~~l~svl~~~~~~~~~EiI~VDDgS-~D~tl~~~~~ 71 (76)
...|.+=||-|.|.... ..|.| +...|...++ .-.|+|+|+. .-.....+|+
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~LtR-La~TL~~Vp~---L~WIVVEd~~~~t~~va~lL~ 72 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAELVR-LSQTLSLVPR---LHWLLVEDAEGPTPLVSGLLA 72 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHHHHH-HHHHHTTSSS---EEEEEEESSSSCCHHHHHHHH
T ss_pred CCCCeEEEEeCCCCCcchhHHHHH-HHHHHhcCCc---eEEEEEcCCCCCCHHHHHHHH
Confidence 45788999999998863 24444 4444555553 3789999974 3334445443
No 25
>4emt_A Transmembrane protein 173; alpha/beta fold, innate immune sensor, C-DI-GMP, C-DI-AMP, M protein; HET: C2E; 1.50A {Homo sapiens} PDB: 4emu_A
Probab=41.60 E-value=6.2 Score=26.29 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=30.5
Q ss_pred chHHHHHHHHHHhhCCC-CCceEEEEEeCCCCCcc---hHhhcccCCC
Q psy5328 32 WSPLIRTILTTLMRTPD-KLLHEVLLIDDASDKYG---VGAFRQPLNQ 75 (76)
Q Consensus 32 ~~~L~~~l~svl~~~~~-~~~~EiI~VDDgS~D~t---l~~~~~~~~~ 75 (76)
+..+.+++..+++..+. .-.+|+|+-+|....+. .++++++|+|
T Consensus 135 ~~~F~r~L~~iL~~~pe~r~~~~LI~Y~~~~~g~~~~ls~~il~hl~q 182 (188)
T 4emt_A 135 AKLFCRTLEDILADAPESQNNCRLIAYQEPADDSSFSLSQEVLRHLRQ 182 (188)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTEEEEEECCCTTCCCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHhCceEEEecCCcccCCcccHHHHHHHHHHH
Confidence 35778899999988654 12589999988753332 2666776665
No 26
>4ef4_A Transmembrane protein 173; sting/MITA/ERIS/MPYS/TMEM173, innate immune system, type I interferon, dimerization, C-DI-GMP; HET: C2E; 2.15A {Homo sapiens} PDB: 4ef5_A 4f9e_A 4f9g_A* 4f5e_A* 4f5d_A* 4f5w_A 4f5y_A*
Probab=37.85 E-value=8.6 Score=26.89 Aligned_cols=43 Identities=14% Similarity=0.163 Sum_probs=27.6
Q ss_pred chHHHHHHHHHHhhCCCC-CceEEEEEeCCCCCcc---hHhhcccCC
Q psy5328 32 WSPLIRTILTTLMRTPDK-LLHEVLLIDDASDKYG---VGAFRQPLN 74 (76)
Q Consensus 32 ~~~L~~~l~svl~~~~~~-~~~EiI~VDDgS~D~t---l~~~~~~~~ 74 (76)
+..+.+++..+++..+.- ..+|+|+-+|....+. -++++++|+
T Consensus 174 ~~lF~rtL~~ILe~~pEcrn~~eLI~Y~d~~~g~~~~ls~~iL~hlr 220 (265)
T 4ef4_A 174 AKLFCRTLEDILADAPESQNNCRLIAYQEPADDSSFSLSQEVLRHLR 220 (265)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCEEEEEECCC-----CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHhCceEEEecCCcccCCcccHHHHHHHHHH
Confidence 457889999999987652 3589999988753221 255555543
No 27
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=24.90 E-value=28 Score=21.23 Aligned_cols=22 Identities=23% Similarity=0.229 Sum_probs=14.1
Q ss_pred eEEEEEeCC-CCCcchHhhcccC
Q psy5328 52 HEVLLIDDA-SDKYGVGAFRQPL 73 (76)
Q Consensus 52 ~EiI~VDDg-S~D~tl~~~~~~~ 73 (76)
..+++|||. +|=.|+....+.|
T Consensus 82 k~VliVDDii~TG~Tl~~a~~~l 104 (152)
T 1nul_A 82 EGFIVIDDLVDTGGTAVAIREMY 104 (152)
T ss_dssp TTEEEEEEEECTTSSHHHHHHHC
T ss_pred CEEEEEEeecCchHHHHHHHHHH
Confidence 468999997 4445665554443
No 28
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=24.55 E-value=95 Score=19.51 Aligned_cols=39 Identities=15% Similarity=0.168 Sum_probs=25.5
Q ss_pred CcEEEEEee--e-cCCchHHHHHHHHHHhhCCCCCceEEEEEeCCC
Q psy5328 19 PTVSVIIIF--T-NEAWSPLIRTILTTLMRTPDKLLHEVLLIDDAS 61 (76)
Q Consensus 19 p~vSVVip~--~-NE~~~~L~~~l~svl~~~~~~~~~EiI~VDDgS 61 (76)
.++.+++|- . |.-+..+.+.+...+++.. +++++.+.+.
T Consensus 20 ~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g----~~~~~~~~~~ 61 (296)
T 3brq_A 20 QTLGLVVTNTLYHGIYFSELLFHAARMAEEKG----RQLLLADGKH 61 (296)
T ss_dssp CEEEEEECGGGCC--CHHHHHHHHHHHHHHTT----CEEEEECCTT
T ss_pred ceEEEEeCCcccCCchHHHHHHHHHHHHHHCC----CEEEEEeCCC
Confidence 468888885 3 4435678888888877642 4787776553
No 29
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=22.24 E-value=22 Score=22.70 Aligned_cols=21 Identities=24% Similarity=0.271 Sum_probs=13.8
Q ss_pred ceEEEEEeCCCCC-cchHhhcc
Q psy5328 51 LHEVLLIDDASDK-YGVGAFRQ 71 (76)
Q Consensus 51 ~~EiI~VDDgS~D-~tl~~~~~ 71 (76)
...+|+|||+-+- .|+....+
T Consensus 120 gk~VllVDDvi~TG~Tl~~a~~ 141 (208)
T 1wd5_A 120 GRDVVLVDDGVATGASMEAALS 141 (208)
T ss_dssp TSEEEEECSCBSSCHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHHH
Confidence 3689999999554 35544433
No 30
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=22.08 E-value=27 Score=25.17 Aligned_cols=27 Identities=11% Similarity=0.053 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHhhCCCCCceEEEEEeCC
Q psy5328 33 SPLIRTILTTLMRTPDKLLHEVLLIDDA 60 (76)
Q Consensus 33 ~~L~~~l~svl~~~~~~~~~EiI~VDDg 60 (76)
..+.+.+..+ +......-+|+++||||
T Consensus 29 ~~i~~~ad~~-~~gl~~~G~~~~~iDDg 55 (433)
T 3cc1_A 29 EEVLGNAEYM-ANHLKKYGWEYIVVDIQ 55 (433)
T ss_dssp HHHHHHHHHH-HHHTGGGTCCEEEECSC
T ss_pred HHHHHHHHHH-HhcchhhCCeEEEECCC
Confidence 3555555555 33222234699999999
Done!