BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5333
(417 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 26/111 (23%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM----- 316
F D D +G L E+ S +++P L+++V++ DTD +G + F+EF+
Sbjct: 27 FKKLDLDNSGSLSVEEFMSLPELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIEGVSQ 81
Query: 317 ----GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE---ILSWIVPSN 360
GD+ QK + + YD +KDG ++ E +L +V +N
Sbjct: 82 FSVKGDKEQKLRFAFRI---------YDMDKDGYISNGELFQVLKMMVGNN 123
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 26/111 (23%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM----- 316
F D D +G L E+ S +++P L+++V++ DTD +G + F+EF+
Sbjct: 26 FKKLDLDNSGSLSVEEFMSLPELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIEGVSQ 80
Query: 317 ----GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE---ILSWIVPSN 360
GD+ QK + + YD +KDG ++ E +L +V +N
Sbjct: 81 FSVKGDKEQKLRFAFRI---------YDMDKDGYISNGELFQVLKMMVGNN 122
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 26/111 (23%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM----- 316
F D D +G L E+ S +++P L+++V++ DTD +G + F+EF+
Sbjct: 13 FKKLDLDNSGSLSVEEFMSLPELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIEGVSQ 67
Query: 317 ----GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE---ILSWIVPSN 360
GD+ QK + + YD +KDG ++ E +L +V +N
Sbjct: 68 FSVKGDKEQKLRFAFRI---------YDMDKDGYISNGELFQVLKMMVGNN 109
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 26/111 (23%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM----- 316
F D D +G L E+ S +++P L+++V++ DTD +G + F+EF+
Sbjct: 12 FKKLDLDNSGSLSVEEFMSLPELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIEGVSQ 66
Query: 317 ----GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE---ILSWIVPSN 360
GD+ QK + + YD +KDG ++ E +L +V +N
Sbjct: 67 FSVKGDKEQKLRFAFRI---------YDMDKDGYISNGELFQVLKMMVGNN 108
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
+ +F A D +++G L++ E+++ + P + V + D D+DG ++FQEF
Sbjct: 30 RSVFAACDANRSGRLEREEFRALCT---ELRVRPADAEAVFQRLDADRDGAITFQEF 83
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
IF D + +G + E A + + P +K ++ E DTD DGF+SFQEF
Sbjct: 14 IFKRFDANGDGKISAAELGE--ALKTLGSITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From
Soil Metagenome
Length = 465
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 22 GSHLNKEREEDGSFVSRDHNHYGQGGEHNTDFDHEAILDRYNNIPQE----DGSFVSRDH 77
GSH+N ++ +G + Y G N D E+I DR+ IP + D V+ DH
Sbjct: 18 GSHMNVKKFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDH 77
Query: 78 NH 79
H
Sbjct: 78 YH 79
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMF--PILIKQVLEEKDTDKDGFLSFQEFM 316
++IF + D D NG +D+ E+ F + + I +K + + D D DG L+ +E +
Sbjct: 39 QLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE-V 97
Query: 317 GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSW 355
+KH + + E+ K D N DG + E L +
Sbjct: 98 TSFFKKHGIEKVAEQVMK----ADANGDGYITLEEFLEF 132
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMF--PILIKQVLEEKDTDKDGFLSFQEFM 316
++IF + D D NG +D+ E+ F + + I +K + + D D DG L+ +E +
Sbjct: 39 QLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE-V 97
Query: 317 GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSW 355
+KH + + E+ K D N DG + E L +
Sbjct: 98 TSFFKKHGIEKVAEQVMK----ADANGDGYITLEEFLEF 132
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 221 DEHLKETYGTEDADD---IDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTE 277
++H+ + Y T D + +D +NL++ +M ++ K F D D NG +DK E
Sbjct: 56 NKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQ-EKMEQKLKWYFKLYDADGNGSIDKNE 114
Query: 278 ----YQSFSAPEEHPHMFP-ILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEK 332
+ + A + P I V + D + DG L+ +EF+ + + IV +
Sbjct: 115 LLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYKS 174
Query: 333 DKFDN 337
F N
Sbjct: 175 FDFSN 179
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDK-FDNEYDTNKDGLLNENEIL 353
I QV DT+KDGF+ F EF+ Q +E+K K + YD + +G +++NE+L
Sbjct: 59 IDQVYNTFDTNKDGFVDFLEFIA--AVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELL 116
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +GF+S E M
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 110
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E ++ +
Sbjct: 111 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVTMMTA 147
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +GF+S E M
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E ++ +
Sbjct: 112 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVTMMT 147
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 303 DTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFD-NEYDTNKDGLLNENEIL 353
DTD +G +SF++F+ +G + V+EK + N YD NKDG + + E+L
Sbjct: 112 DTDHNGAVSFEDFI--KGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEML 161
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +GF+S E M
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E ++ +
Sbjct: 112 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVTMMT 147
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +GF+S E M
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 110
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E ++ +
Sbjct: 111 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVTMMT 146
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +GF+S E M
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E ++ +
Sbjct: 112 NLGEKLTD----EEVDEMIRESDIDGDGQVNYEEFVTMMT 147
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMF--PILIKQVLEEKDTDKDGFLSFQEFM 316
++IF A D D NG +D E+ F+A + + + +K + + D D DG L+ +E +
Sbjct: 39 QLIFKAIDIDGNGEIDLAEFTKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEE-V 97
Query: 317 GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSW 355
+K + +V++ K D N DG + E L++
Sbjct: 98 TTFFKKFGYEKVVDQIMK----ADANGDGYITLEEFLAF 132
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 29.6 bits (65), Expect = 3.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 253 QMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSF 312
Q + + IF D + +G + +E A + + P +++++ E DTD DGF+SF
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGD--ALKTLGSVTPDEVRRMMAEIDTDGDGFISF 65
Query: 313 QEF 315
EF
Sbjct: 66 DEF 68
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 277 EYQSFSAPEEHP-HMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKF 335
++ F +PE+ H+F + D D +GF+ F+EF+ + +EEK +
Sbjct: 54 QFFPFGSPEDFANHLFTVF--------DKDNNGFIHFEEFITVLST--TSRGTLEEKLSW 103
Query: 336 DNE-YDTNKDGLLNENEILSWIVPS 359
E YD N DG + +E+L+ IV S
Sbjct: 104 AFELYDLNHDGYITFDEMLT-IVAS 127
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 183 DRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTE 231
D +EL S ++ EE S +D D+N DG +D+DE LK G +
Sbjct: 111 DAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ 159
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 298 VLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNE-------YDTNKDGLLNEN 350
++EE D D G + F+EF+ RQ + K K + E +D N DG ++
Sbjct: 58 IIEEVDEDGSGTIDFEEFL----VMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAE 113
Query: 351 EILSWIVPSNEDIAEEEV 368
E+ S E + +EE+
Sbjct: 114 ELAEIFRASGEHVTDEEI 131
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 183 DRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTE 231
D +EL S ++ EE S +D D+N DG +D+DE LK G +
Sbjct: 111 DAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ 159
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 298 VLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNE-------YDTNKDGLLNEN 350
++EE D D G + F+EF+ RQ + K K + E +D N DG ++
Sbjct: 58 IIEEVDEDGSGTIDFEEFL----VMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAE 113
Query: 351 EILSWIVPSNEDIAEEEV 368
E+ S E + +EE+
Sbjct: 114 ELAEIFRASGEHVTDEEI 131
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + +K+ D D +GF+S E M
Sbjct: 51 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMT 110
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + ++
Sbjct: 111 NLGEKLTD----EEVDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 34/140 (24%)
Query: 239 TNLGDDMNLLLLFTQMVKQDK------MIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFP 292
T L D+ L+++Q Q +FNA D D NG + ++ F
Sbjct: 106 TGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAI---HFEDFVVG------LS 156
Query: 293 ILIKQVLEEK--------DTDKDGFLSFQEFMG------DRGQKHNRQYI-----VEEKD 333
IL++ + EK D +KDG ++ +E + D +H + +E +
Sbjct: 157 ILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVE 216
Query: 334 KFDNEYDTNKDGLLNENEIL 353
+F + D N+DG++ +E L
Sbjct: 217 RFFQKMDRNQDGVVTIDEFL 236
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 296 KQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSW 355
K+V E+ D +KDG LS EF + + + E+ KF E D + +G LN +E S
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFR-EVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 356 I 356
I
Sbjct: 63 I 63
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 32/129 (24%)
Query: 207 FEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAAD 266
F D N DG +D+ E + + VT+ G ++ ++ K F+ D
Sbjct: 69 FRTFDANGDGTIDFREFIIA---------LSVTSRG----------KLEQKLKWAFSMYD 109
Query: 267 GDKNGVLDKTE--------YQSFSAPEEHPH---MFPILIKQVLEEKDTDKDGFLSFQEF 315
D NG + K E Y+ S+ + P +++ + DT++DG LS +EF
Sbjct: 110 LDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Query: 316 MGDRGQKHN 324
+ RG K +
Sbjct: 170 I--RGAKSD 176
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + +K+ D D +GF+S E M
Sbjct: 48 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT 107
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + ++
Sbjct: 108 NLGEKLTD----EEVDEMIREADVDGDGQVNYEEFVQVMMA 144
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + +K+ D D +GF+S E M
Sbjct: 51 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT 110
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + ++
Sbjct: 111 NLGEKLTD----EEVDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|2VVN|A Chain A, Btgh84 In Complex With Nh-Butylthiazoline
pdb|2VVN|B Chain B, Btgh84 In Complex With Nh-Butylthiazoline
pdb|2VVS|A Chain A, Btgh84 Structure In Complex With Pugnac
pdb|2X0H|A Chain A, Btgh84 Michaelis Complex
pdb|2X0H|B Chain B, Btgh84 Michaelis Complex
pdb|4AIS|A Chain A, A Complex Structure Of Btgh84
pdb|4AIS|B Chain B, A Complex Structure Of Btgh84
Length = 737
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 238 VTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQ 297
VT +++L Q++ Q+K I D V YQ E +PH +L K+
Sbjct: 17 VTTFAQNVSLQPPPQQLIVQNKTI------DLPAV-----YQLNGGEEANPHAVKVL-KE 64
Query: 298 VLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEIL 353
+L K + K G L +G++G K R+Y + D + Y + +NE EI+
Sbjct: 65 LLSGKQSSKKGMLI---SIGEKGDKSVRKYSRQIPDHKEGYYLS-----VNEKEIV 112
>pdb|2WZI|A Chain A, Btgh84 D243n In Complex With 5f-Oxazoline
pdb|2WZI|B Chain B, Btgh84 D243n In Complex With 5f-Oxazoline
Length = 737
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 238 VTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQ 297
VT +++L Q++ Q+K I D V YQ E +PH +L K+
Sbjct: 17 VTTFAQNVSLQPPPQQLIVQNKTI------DLPAV-----YQLNGGEEANPHAVKVL-KE 64
Query: 298 VLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEIL 353
+L K + K G L +G++G K R+Y + D + Y + +NE EI+
Sbjct: 65 LLSGKQSSKKGMLI---SIGEKGDKSVRKYSRQIPDHKEGYYLS-----VNEKEIV 112
>pdb|2WZH|A Chain A, Btgh84 D242n In Complex With Meumb-Derived Oxazoline
pdb|4AIU|A Chain A, A Complex Structure Of Btgh84
Length = 737
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 238 VTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQ 297
VT +++L Q++ Q+K I D V YQ E +PH +L K+
Sbjct: 17 VTTFAQNVSLQPPPQQLIVQNKTI------DLPAV-----YQLNGGEEANPHAVKVL-KE 64
Query: 298 VLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEIL 353
+L K + K G L +G++G K R+Y + D + Y + +NE EI+
Sbjct: 65 LLSGKQSSKKGMLI---SIGEKGDKSVRKYSRQIPDHKEGYYLS-----VNEKEIV 112
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSA-----PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
+ N D D NG +D E+ + A EE I++ D D +GF+S E
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDSEEE-------IREAFRVFDKDGNGFISAAEL 103
Query: 316 ---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
M + G+K EE D+ E D + DG +N E ++ +
Sbjct: 104 RHVMTNLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVTMMT 144
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 112 NLGEKLTD----EEVDQMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 184 RKELQAWILRSFRMLSVEESNSRFEDA----DENTDGVVDWDEHLKETYGTEDADDIDVT 239
+K QA +L L+ +E D D+N DG +D E L + Y +++ V
Sbjct: 42 QKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQE-LIDGYSKLSGEEVAVF 100
Query: 240 NLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVL 299
+L Q+ + I AAD D+NG +D +E+ + A + + ++
Sbjct: 101 DL----------PQIESEVDAILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAF 149
Query: 300 EEKDTDKDGFLSFQEFMGDRGQKH 323
++ D D +G +S E G H
Sbjct: 150 QKFDQDGNGKISVDELASVFGLDH 173
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E + +
Sbjct: 412 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMT 447
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 353 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 412
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E + +
Sbjct: 413 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMT 448
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 318 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 377
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E + +
Sbjct: 378 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMT 413
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 318 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 377
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E + +
Sbjct: 378 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMT 413
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E + +
Sbjct: 412 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMT 447
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 49 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 108
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 109 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 145
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 112 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 112 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 184 RKELQAWILRSFRMLSVEESNSRFEDA----DENTDGVVDWDEHLKETYGTEDADDIDVT 239
+K QA +L L+ +E D D+N DG +D E L + Y +++ V
Sbjct: 325 QKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQE-LIDGYSKLSGEEVAVF 383
Query: 240 NLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVL 299
+L Q+ + I AAD D+NG +D +E+ + A + + ++
Sbjct: 384 DL----------PQIESEVDAILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAF 432
Query: 300 EEKDTDKDGFLSFQEFMGDRGQKH 323
++ D D +G +S E G H
Sbjct: 433 QKFDQDGNGKISVDELASVFGLDH 456
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 315 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 374
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E + +
Sbjct: 375 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMT 410
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 48 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 107
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 108 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 144
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 111 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 55 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 114
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 115 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 151
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 53 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 112
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 113 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 112 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 112 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 49 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 108
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 109 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 145
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 57 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 116
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 117 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 111 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 47 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 106
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G+K EE D+ E D + DG +N E + +
Sbjct: 107 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMTA 143
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E + +
Sbjct: 412 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMT 447
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 49 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 108
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E + +
Sbjct: 109 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMT 144
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ N D D NG +D E+ + A + I++ D D +G++S E M
Sbjct: 50 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 109
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
+ G+K EE D+ E D + DG +N E + +
Sbjct: 110 NLGEKLTD----EEVDEMIREADIDGDGQVNYEEFVQMMT 145
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,222,994
Number of Sequences: 62578
Number of extensions: 567986
Number of successful extensions: 1453
Number of sequences better than 100.0: 129
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1161
Number of HSP's gapped (non-prelim): 331
length of query: 417
length of database: 14,973,337
effective HSP length: 101
effective length of query: 316
effective length of database: 8,652,959
effective search space: 2734335044
effective search space used: 2734335044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (25.0 bits)