RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5333
(417 letters)
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 73.7 bits (181), Expect = 1e-14
Identities = 33/227 (14%), Positives = 73/227 (32%), Gaps = 39/227 (17%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEH 223
LR L + ++ ++L+ + + + F + +T G + +
Sbjct: 121 TNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITL 180
Query: 224 LKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSA 283
+ +D+ L F D + NG L + E++
Sbjct: 181 VAVA---------------NDLAAL----------VADFRKIDTNSNGTLSRKEFR--EH 213
Query: 284 PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF--MGDRGQKHNRQYIVEEKDKFDNEYDT 341
+ + D D+ + F E+ +G + + D
Sbjct: 214 FVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLV--------LRILY-AFADF 264
Query: 342 NKDGLLNENEILSWIVPSN-EDIAEEEVNHLFAASDDDHDDLLSFDE 387
+K G L++ E+ + ++ + A ++ H F+ D D LS+ E
Sbjct: 265 DKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQE 311
Score = 56.4 bits (136), Expect = 4e-09
Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 32/156 (20%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEH 223
L + +D N + + RKE + ++ F ADE+ V + E
Sbjct: 187 LAALVADFRKIDTNSNGTLSRKEFRE-HFVRLGFDKKSVQDALFRYADEDESDDVGFSE- 244
Query: 224 LKETYGTEDADDIDVTNLGDDMNLLLLFTQM---VKQDKMIFNAADGDKNGVLDKTEYQS 280
+ + + ++++ AD DK+G L K E Q
Sbjct: 245 ---------------------------YVHLGLCLLVLRILYAFADFDKSGQLSKEEVQK 277
Query: 281 FSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
P + D D LS+QEF+
Sbjct: 278 VLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFV 313
Score = 27.9 bits (62), Expect = 6.5
Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 20/151 (13%)
Query: 250 LFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEK------D 303
+F+Q + Q + + + K ++ SF+ E+ + + ++ E+K D
Sbjct: 2 IFSQELTQREANVKKVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYD 61
Query: 304 TDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFD---NEYDTNKDGLLNENEILSWIVPSN 360
+E +R ++ R EK + + + + G
Sbjct: 62 QKVQNEFDARER-AEREREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPS-------K 113
Query: 361 EDIAEEEVNHL---FAASDDDHDDLLSFDEI 388
++EE+ N L F +S SF ++
Sbjct: 114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDL 144
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 69.6 bits (170), Expect = 3e-14
Identities = 20/164 (12%), Positives = 52/164 (31%), Gaps = 24/164 (14%)
Query: 266 DGDKNGVLDKTEYQSF--------------SAPEEHPHMFPILIKQVLEEKDTDKDGFLS 311
D + +G + +++ + + + + D +KD +S
Sbjct: 19 DMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVS 78
Query: 312 FQEFM--------GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDI 363
++E++ + + D + DG+++ E ++ N +
Sbjct: 79 WEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYC--KNFQL 136
Query: 364 AEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATDFGDHL 407
+V ++ D + E + + S A D G+ L
Sbjct: 137 QCADVPAVYNVITDGGKVTFDLNRYKELYYRLLTSPAADAGNTL 180
Score = 41.8 bits (98), Expect = 1e-04
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE- 222
+ R+ L K MD++ D +D +E Q + ++F+ L + + + + D +
Sbjct: 104 QNRIPFLFKGMDVSGDGIVDLEEFQNY-CKNFQ-LQCADVPAVYNVITDGGKVTFDLNRY 161
Query: 223 --HLKETYGTEDAD 234
+ AD
Sbjct: 162 KELYYRLLTSPAAD 175
Score = 30.7 bits (69), Expect = 0.51
Identities = 18/160 (11%), Positives = 38/160 (23%), Gaps = 49/160 (30%)
Query: 156 KMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTD 215
M+ + R L D+NKD+ + +E A
Sbjct: 51 YKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAM------------------------- 85
Query: 216 GVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDK 275
W++ + D + +F D +G++D
Sbjct: 86 ----WEKTIATCKSVADLPAWCQNRI-----------------PFLFKGMDVSGDGIVDL 124
Query: 276 TEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
E+Q++ + + V +
Sbjct: 125 EEFQNYCKNFQLQ---CADVPAVYNVITDGGKVTFDLNRY 161
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 68.6 bits (168), Expect = 7e-14
Identities = 26/177 (14%), Positives = 58/177 (32%), Gaps = 20/177 (11%)
Query: 251 FTQMVKQD-----KMIFNAADGDKNGVLDKTEY--------QSFSAPEEHPHMFPILIKQ 297
T+ + K D +G + + +Y + E +
Sbjct: 4 ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLR 63
Query: 298 VLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFD------NEYDTNKDGLLNENE 351
V ++ +S +E + + E+ + DT+KDG ++ E
Sbjct: 64 VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123
Query: 352 ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE-HHDVFVGSEATDFGDHL 407
+++ D+ +++ F D + + +S DE + +D G E T +
Sbjct: 124 FKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFLFGLEETALANAF 180
Score = 53.2 bits (128), Expect = 2e-08
Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 22/162 (13%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR---------FEDADENT 214
++++ ++ +D+ D I R++ + +R ++ + + +
Sbjct: 13 LRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAP 72
Query: 215 DGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLD 274
+ +E + + + V Q ++++ D DK+G +
Sbjct: 73 GVRISVEEAAVNATDSLLKMKGEEKAM------------AVIQSLIMYDCIDTDKDGYVS 120
Query: 275 KTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
E+++F P + D +K+G +S EF+
Sbjct: 121 LPEFKAF-LQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
Score = 39.7 bits (93), Expect = 5e-04
Identities = 14/90 (15%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 148 WRNPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRF 207
+ + +K + K + + ++ +D +KD + E +A++ L+ +++ + F
Sbjct: 85 ATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCF 144
Query: 208 EDADENTDGVVDWDE---HLKETYGTEDAD 234
D N +G + DE + + +
Sbjct: 145 NTLDFNKNGQISRDEFLVTVNDFLFGLEET 174
Score = 30.5 bits (69), Expect = 0.64
Identities = 25/134 (18%), Positives = 41/134 (30%), Gaps = 26/134 (19%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
IA L + T++ + + L I +E S + EE
Sbjct: 46 IAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSL 105
Query: 207 --FEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNA 264
++ D + DG V E K +G D+ FN
Sbjct: 106 IMYDCIDTDKDGYVSLPE-FKAFL----------QAVGPDLT-----DDKAIT---CFNT 146
Query: 265 ADGDKNGVLDKTEY 278
D +KNG + + E+
Sbjct: 147 LDFNKNGQISRDEF 160
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 65.9 bits (160), Expect = 2e-12
Identities = 36/264 (13%), Positives = 78/264 (29%), Gaps = 44/264 (16%)
Query: 162 LTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLS----------VEESNSRFEDAD 211
L + ++ D + + I+ KEL + + L + S D
Sbjct: 8 LDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYD 67
Query: 212 ENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNG 271
DG + +E E+ + N + I+ D D +G
Sbjct: 68 ATFDGRLQIEELANMILPQEENFLLIFRREAPLDN--------SVEFMKIWRKYDADSSG 119
Query: 272 VLDKTEYQSF-------SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM-------- 316
+ E ++F + P+ +++ D +KDG L +
Sbjct: 120 YISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQEN 179
Query: 317 ---GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWI--------VPSNEDIAE 365
+ ++ + +K YD ++ G L E+ ++ + +
Sbjct: 180 FLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLD 239
Query: 366 EEVNHLFAASDDDHDDLLSFDEIV 389
+ L D + D + E+
Sbjct: 240 KFRECLLTHCDMNKDGKIQKSELA 263
Score = 43.1 bits (101), Expect = 7e-05
Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 24/191 (12%)
Query: 150 NPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRM---------LSV 200
N + + + + + + D + I EL+ L+ +
Sbjct: 89 NFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKN-FLKDLFLQHKKKIPPNKLD 147
Query: 201 EESNSRFEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKM 260
E +++ + D+N DG +D ++ + E+ + + + +
Sbjct: 148 EYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVE-------RKRDFEK 200
Query: 261 IFNAADGDKNGVLDKTEYQSF-------SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQ 313
IF D + G L+ E F P + +L D +KDG +
Sbjct: 201 IFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKS 260
Query: 314 EFMGDRGQKHN 324
E G KH
Sbjct: 261 ELALCLGLKHK 271
Score = 43.1 bits (101), Expect = 8e-05
Identities = 24/160 (15%), Positives = 46/160 (28%), Gaps = 27/160 (16%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSF---------SAPEEHPHMFPILIKQVLEEKDTDKDGF 309
I+ D D NG ++ E F + + K + D DG
Sbjct: 14 LQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGR 73
Query: 310 LSFQEFM----------GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEI------- 352
L +E ++ E K +YD + G ++ E+
Sbjct: 74 LQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDL 133
Query: 353 -LSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEH 391
L + +E + + D + D L +++
Sbjct: 134 FLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARI 173
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 59.1 bits (143), Expect = 2e-10
Identities = 25/156 (16%), Positives = 58/156 (37%), Gaps = 20/156 (12%)
Query: 253 QMVKQDKMIFNAADGDKNGVLDKTEY--------QSFSAPEEHPHMFPILIKQVLEEKDT 304
+M+ + F+ D D +G ++ E Q +A +E ++ K
Sbjct: 33 KMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGV 92
Query: 305 DKDGFLSFQEFM----------GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILS 354
+ L ++++ +R ++ I + + + D + DG ++ +E+ +
Sbjct: 93 EPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKT 152
Query: 355 WIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ D+ +E F +D D L E+V
Sbjct: 153 MM--KAFDVPQEAAYTFFEKADTDKSGKLERTELVH 186
Score = 53.3 bits (128), Expect = 2e-08
Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 31/184 (16%)
Query: 149 RNPIAGLKMQMKILTK---KRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLS------ 199
R+ + ++ L RL DL+ D ++ E+ W R ++++
Sbjct: 17 RSVGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQV 76
Query: 200 ---VEESNSRFEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVK 256
+ F + ++ ++ +A+ + LL
Sbjct: 77 EKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLS------ 130
Query: 257 QDKMIFNAADGDKNGVLDKTEYQ----SFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSF 312
++ D D +G +D E + +F P+E E+ DTDK G L
Sbjct: 131 --NSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEA-------AYTFFEKADTDKSGKLER 181
Query: 313 QEFM 316
E +
Sbjct: 182 TELV 185
Score = 29.4 bits (66), Expect = 1.7
Identities = 16/112 (14%), Positives = 43/112 (38%), Gaps = 12/112 (10%)
Query: 300 EEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFD---NEYDTNKDGLLNENE----- 351
E + + + +G++ Q + + + + +D + DG + +E
Sbjct: 3 ERLNEQNNESYRYLRSVGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWP 62
Query: 352 --ILSWIVPSNEDIAE--EEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSE 399
+ + ++E + + + V F + + L ++ VE + VF +E
Sbjct: 63 DRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAE 114
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 58.2 bits (141), Expect = 2e-10
Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 24/163 (14%)
Query: 259 KMIFNAADGDKNGVLDKTEYQ--------------SFSAPEEHPHMFPILIKQVLEEKDT 304
F D D NG +D++++ + L + + D
Sbjct: 7 AARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADR 66
Query: 305 DKDGFLSFQEF-------MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
D D ++ +EF + D+ + DT+ DG + + +
Sbjct: 67 DGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALG-VADTDGDGAVTVADTARAL- 124
Query: 358 PSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEA 400
+ + E+ AA D D D + EIV + A
Sbjct: 125 -TAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFARYFTVPA 166
Score = 49.0 bits (117), Expect = 3e-07
Identities = 27/173 (15%), Positives = 48/173 (27%), Gaps = 40/173 (23%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR---------------FE 208
++R+ D + + +IDR + V + R
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 209 DADENTDGVVDWDEHLKETYGT-EDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADG 267
AD + D + +E + D D + AD
Sbjct: 63 IADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFL-------------HAALGVADT 109
Query: 268 DKNGVLDKTEYQ----SFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
D +G + + +F PE+ +Q DTD DG + E +
Sbjct: 110 DGDGAVTVADTARALTAFGVPEDL-------ARQAAAALDTDGDGKVGETEIV 155
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 60.9 bits (148), Expect = 3e-10
Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 30/161 (18%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRM--------LSVEESNSRFEDADENTD 215
+K L + K +D N D +D+KEL EE ++ ++ D + +
Sbjct: 354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKN 413
Query: 216 GVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDK 275
G +++ E + +D L + L F D DK+G + K
Sbjct: 414 GYIEYSEFISVC--------MDKQILFSEERLRRAFNLF-----------DTDKSGKITK 454
Query: 276 TEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
E + VL E D +KD + F EF+
Sbjct: 455 EELANLFGLTSISEKT---WNDVLGEADQNKDNMIDFDEFV 492
Score = 53.2 bits (128), Expect = 8e-08
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 247 LLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTE-------YQSFSAPEEHPHMFPIL 294
+L + +++ + IF D + +G LDK E ++F
Sbjct: 341 ILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEE 400
Query: 295 IKQVLEEKDTDKDGFLSFQEFMG---DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
+ +L+E D DK+G++ + EF+ D+ + + + + FD T+K G + + E
Sbjct: 401 VDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFD----TDKSGKITKEE 456
Query: 352 ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+ + + I+E+ N + +D + D+++ FDE
Sbjct: 457 LAN--LFGLTSISEKTWNDVLGEADQNKDNMIDFDE 490
Score = 40.8 bits (96), Expect = 6e-04
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM-------GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLL 347
+ + ++ D + DG L +E + + + + + EE D E D +K+G +
Sbjct: 357 LTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYI 416
Query: 348 NENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+E +S + +EE + F D D ++ +E+
Sbjct: 417 EYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELAN 459
Score = 35.4 bits (82), Expect = 0.033
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 160 KILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVD 219
+ +++RLR D +K I ++EL + + S + N +AD+N D ++D
Sbjct: 430 ILFSEERLRRAFNLFDTDKSGKITKEELAN-LFGLTSI-SEKTWNDVLGEADQNKDNMID 487
Query: 220 WDE 222
+DE
Sbjct: 488 FDE 490
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 57.8 bits (140), Expect = 3e-10
Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 16/166 (9%)
Query: 259 KMIFNAADGDKNGVLDKTEY--------QSFSAPEEHPHMFPILIKQVLEE--KDTDKDG 308
K FN D DK+G + + ++ + EH + + V +
Sbjct: 9 KTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGK 68
Query: 309 FLSFQEFMGDRGQKHNRQYIVEEKDKFDNE----YDTNKDGLLNENEILSWIVPSNEDIA 364
+ F+ + + DTN+D ++ +E + +
Sbjct: 69 GIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF--GMLGLD 126
Query: 365 EEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATDFGDHLTNP 410
+ F A D ++D LLS +E V F ++ P
Sbjct: 127 KTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMNDGDSTNKVFWGP 172
Score = 50.9 bits (122), Expect = 8e-08
Identities = 21/164 (12%), Positives = 50/164 (30%), Gaps = 28/164 (17%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILR-----------SFRMLSVEESNSRFEDADE 212
++++ +D +KD I R + ++ R + ++
Sbjct: 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAV 64
Query: 213 NTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGV 272
+D + + + + + F A D +++
Sbjct: 65 AGGKGIDETTFINSMKEMVKNPEAK--------------SVVEGPLPLFFRAVDTNEDNN 110
Query: 273 LDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ + EY F + + + DT+ DG LS +EF+
Sbjct: 111 ISRDEYGIFF---GMLGLDKTMAPASFDAIDTNNDGLLSLEEFV 151
Score = 37.8 bits (88), Expect = 0.002
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 162 LTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWD 221
+ + L L + +D N+DNNI R E + + + + F+ D N DG++ +
Sbjct: 91 VVEGPLPLFFRAVDTNEDNNISRDEYGIF-FGMLGL-DKTMAPASFDAIDTNNDGLLSLE 148
Query: 222 EHLK--ETYGTEDAD 234
E + + D D
Sbjct: 149 EFVIAGSDFFMNDGD 163
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 60.1 bits (146), Expect = 5e-10
Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 34/167 (20%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQA--------------WILRSFRMLSVEESNSRFED 209
K+L + + +D N D +DR EL ++++ ++ +S
Sbjct: 330 TKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPL 389
Query: 210 ADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDK 269
D + G +++ E + ID T L + F D D
Sbjct: 390 LDMDGSGSIEYSEFIASA--------IDRTILLSRERMERAFKMF-----------DKDG 430
Query: 270 NGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+G + E + + + ++ ++E+ D +KDG + F EF+
Sbjct: 431 SGKISTKELFKLFSQADS-SIQMEELESIIEQVDNNKDGEVDFNEFV 476
Score = 51.6 bits (124), Expect = 2e-07
Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 25/162 (15%)
Query: 247 LLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTE-------------YQSFSAPEEHP 288
LL + +++ D IF D + +G+LD+ E S S +
Sbjct: 317 LLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEG 376
Query: 289 HMFPILIKQVLEEKDTDKDGFLSFQEFMG---DRGQKHNRQYIVEEKDKFDNEYDTNKDG 345
I ++ D D G + + EF+ DR +R+ + FD + G
Sbjct: 377 STIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFD----KDGSG 432
Query: 346 LLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
++ E+ ++ I EE+ + D++ D + F+E
Sbjct: 433 KISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNE 474
Score = 41.2 bits (97), Expect = 5e-04
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 160 KILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVD 219
+L+++R+ K D + I KEL ++ + +EE S E D N DG VD
Sbjct: 412 ILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVD 471
Query: 220 WDE 222
++E
Sbjct: 472 FNE 474
Score = 40.4 bits (95), Expect = 8e-04
Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 13/109 (11%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM-------------GDRGQKHNRQYIVEEKDKFDNEYDT 341
+ ++ + DT+ DG L E + + ++ I ++ D D
Sbjct: 333 LTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDM 392
Query: 342 NKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ G + +E ++ + ++ E + F D D +S E+ +
Sbjct: 393 DGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFK 441
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 57.5 bits (139), Expect = 6e-10
Identities = 18/165 (10%), Positives = 60/165 (36%), Gaps = 25/165 (15%)
Query: 266 DGDKNGVLDKTEYQSFS--------------APEEHPHMFPILIKQVLEEKDTDKDGFLS 311
D + +GV++ +++ E ++ + + D ++D ++
Sbjct: 23 DCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVT 82
Query: 312 FQEFM--------GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDI 363
+E++ + +++ + + + DT+ D +++++E + + I
Sbjct: 83 KEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVY--MSYGI 140
Query: 364 AEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATDF-GDHL 407
+ + + F D +++ + + S G+HL
Sbjct: 141 PKSDCDAAFDTLSDGGKTMVTREIFARLWTEYFVSNDRGAKGNHL 185
Score = 53.3 bits (128), Expect = 2e-08
Identities = 23/169 (13%), Positives = 49/169 (28%), Gaps = 29/169 (17%)
Query: 164 KKRLRLLLKNM-DLNKDNNIDRKELQAWILRSFRMLSVEESNSR---------------F 207
+ ++ + D N D I+ + + I + + S +
Sbjct: 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLR 70
Query: 208 EDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADG 267
+ ADEN D V +E LK + + + + +F+ D
Sbjct: 71 KYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYM----------NFMFDVNDT 120
Query: 268 DKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ ++DK EY + P + ++ + F
Sbjct: 121 SGDNIIDKHEYSTVYMSYGIP---KSDCDAAFDTLSDGGKTMVTREIFA 166
Score = 38.7 bits (90), Expect = 0.002
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE- 222
K + + D + DN ID+ E S+ + + ++ F+ + +V +
Sbjct: 108 TKYMNFMFDVNDTSGDNIIDKHEYSTV-YMSY-GIPKSDCDAAFDTLSDGGKTMVTREIF 165
Query: 223 --HLKETYGTEDAD 234
E + + D
Sbjct: 166 ARLWTEYFVSNDRG 179
Score = 29.0 bits (65), Expect = 2.1
Identities = 10/75 (13%), Positives = 25/75 (33%), Gaps = 15/75 (20%)
Query: 328 IVEEKDKFDNEYDTNKDGLLNENEIL---------------SWIVPSNEDIAEEEVNHLF 372
+ F+ YD N DG++ ++ + + L
Sbjct: 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLR 70
Query: 373 AASDDDHDDLLSFDE 387
+D++ D+ ++ +E
Sbjct: 71 KYADENEDEQVTKEE 85
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 56.7 bits (137), Expect = 7e-10
Identities = 31/153 (20%), Positives = 61/153 (39%), Gaps = 23/153 (15%)
Query: 259 KMIFNAADGDKNGVLDKTEY------------QSFSAPE--EHPHMFPILIKQVLEEKDT 304
K F+ D D NG L++ ++ + A E + F L + +E
Sbjct: 10 KKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGV 69
Query: 305 DKDGFLSFQEF-------MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIV 357
DG L+ ++F + ++G+ + + D N DG +N +E +W+
Sbjct: 70 GSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWL- 128
Query: 358 PSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ +++ E F D + + LS DE++
Sbjct: 129 -TALGMSKAEAAEAFNQVDTNGNGELSLDELLT 160
Score = 51.3 bits (123), Expect = 6e-08
Identities = 19/174 (10%), Positives = 55/174 (31%), Gaps = 37/174 (21%)
Query: 162 LTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR--------------- 206
+ RL+ D + + ++R + + + +
Sbjct: 4 IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYL 63
Query: 207 FEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAAD 266
++A +DG + ++ ++ T + + + ++ K I D
Sbjct: 64 AKEAGVGSDGSLTEEQFIRVT--ENLIFEQGEASFNRVLGPVV---------KGIVGMCD 112
Query: 267 GDKNGVLDKTEYQSFSA----PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ +G ++ E+ ++ + + + DT+ +G LS E +
Sbjct: 113 KNADGQINADEFAAWLTALGMSKAE-------AAEAFNQVDTNGNGELSLDELL 159
Score = 36.7 bits (85), Expect = 0.006
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE- 222
++ ++ D N D I+ E AW L + M S E+ F D N +G + DE
Sbjct: 101 GPVVKGIVGMCDKNADGQINADEFAAW-LTALGM-SKAEAAEAFNQVDTNGNGELSLDEL 158
Query: 223 --HLKETYGTED 232
+++ +
Sbjct: 159 LTAVRDFHFGRL 170
Score = 32.0 bits (73), Expect = 0.19
Identities = 22/159 (13%), Positives = 39/159 (24%), Gaps = 30/159 (18%)
Query: 129 TLTGKSFKHGSYALFECYPWRNPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQ 188
L F+ + + E + + A +K L K + D ++ ++
Sbjct: 23 ALERADFEKEAQHIAEAFGK-DAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI 81
Query: 189 AWILRSFRMLSVEESNSR--------FEDADENTDGVVDWDEHLKETYGTEDADDIDVTN 240
N D+N DG ++ DE +
Sbjct: 82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADE-FAAWLTALGMSKAEA-- 138
Query: 241 LGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQ 279
+ FN D + NG L E
Sbjct: 139 --AEA----------------FNQVDTNGNGELSLDELL 159
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 58.9 bits (143), Expect = 1e-09
Identities = 35/164 (21%), Positives = 52/164 (31%), Gaps = 33/164 (20%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-----------FEDADE 212
K L + MD N D +DR EL RM + S + D
Sbjct: 334 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDF 393
Query: 213 NTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGV 272
+ +G +++ E + +D L L F D D +G
Sbjct: 394 DKNGYIEYSEFVTVA--------MDRKTLLSRERLERAFRMF-----------DSDNSGK 434
Query: 273 LDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ TE + + K VL E D + DG + F EF
Sbjct: 435 ISSTELATIFGVSDVDSET---WKSVLSEVDKNNDGEVDFDEFQ 475
Score = 51.6 bits (124), Expect = 3e-07
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 247 LLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTE----------YQSFSAPEEHPHMF 291
LL + +++ QD IF+ D + +G LD+ E + A
Sbjct: 321 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 380
Query: 292 PILIKQVLEEKDTDKDGFLSFQEFMG---DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLN 348
+ QVL+ D DK+G++ + EF+ DR +R+ + FD ++ G ++
Sbjct: 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFD----SDNSGKIS 436
Query: 349 ENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
E+ + + D+ E + + D ++D + FDE
Sbjct: 437 STELAT--IFGVSDVDSETWKSVLSEVDKNNDGEVDFDE 473
Score = 40.4 bits (95), Expect = 0.001
Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 10/106 (9%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM----------GDRGQKHNRQYIVEEKDKFDNEYDTNKD 344
+ + + D + DG L E + G + + E D+ + D +K+
Sbjct: 337 LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKN 396
Query: 345 GLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
G + +E ++ + ++ E + F D D+ +S E+
Sbjct: 397 GYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELAT 442
Score = 37.0 bits (86), Expect = 0.010
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 160 KILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVD 219
+L+++RL + D + I EL I + E S + D+N DG VD
Sbjct: 413 TLLSRERLERAFRMFDSDNSGKISSTELAT-IFGVSDV-DSETWKSVLSEVDKNNDGEVD 470
Query: 220 WDE 222
+DE
Sbjct: 471 FDE 473
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 58.6 bits (142), Expect = 2e-09
Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 30/161 (18%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQA--------WILRSFRMLSVEESNSRFEDADENTD 215
K L + +++D N D +DR+EL + E ++ AD + +
Sbjct: 345 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRN 404
Query: 216 GVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDK 275
G +D+ E + +D +L L F + D D NG +
Sbjct: 405 GYIDYSEFVTVA--------MDRKSLLSKDKLESAFQKF-----------DQDGNGKISV 445
Query: 276 TEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
E S H+ K+++ D++ DG + F+EF
Sbjct: 446 DELASVFG---LDHLESKTWKEMISGIDSNNDGDVDFEEFC 483
Score = 52.0 bits (125), Expect = 2e-07
Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 21/156 (13%)
Query: 247 LLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTE-------YQSFSAPEEHPHMFPIL 294
LL + +++ Q+ IF D + +G LD+ E
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 295 IKQVLEEKDTDKDGFLSFQEFMG---DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
+ +L D D++G++ + EF+ DR ++ + KFD + +G ++ +E
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFD----QDGNGKISVDE 447
Query: 352 ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+ S V + + + + + D ++D + F+E
Sbjct: 448 LAS--VFGLDHLESKTWKEMISGIDSNNDGDVDFEE 481
Score = 41.6 bits (98), Expect = 3e-04
Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF-------MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLL 347
+ + D + DG L QE G+ + I E D D +++G +
Sbjct: 348 LTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYI 407
Query: 348 NENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ +E ++ + ++++++ F D D + +S DE+
Sbjct: 408 DYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELAS 450
Score = 35.8 bits (83), Expect = 0.026
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 160 KILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVD 219
+L+K +L + D + + I EL + + + + D N DG VD
Sbjct: 421 SLLSKDKLESAFQKFDQDGNGKISVDELAS-VFGLDHL-ESKTWKEMISGIDSNNDGDVD 478
Query: 220 WDE 222
++E
Sbjct: 479 FEE 481
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 54.2 bits (131), Expect = 6e-09
Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 259 KMIFNAADGDKNGVLDKTE--------YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFL 310
F A D D +G + E FS +++L D + G +
Sbjct: 30 MEWFRAVDTDGSGAISVPELNAALSSAGVPFSLAT---------TEKLLHMYDKNHSGEI 80
Query: 311 SFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNH 370
+F EF K +I+ ++ F + D++ DG L+ NE+ + ++ S ++E+
Sbjct: 81 TFDEF------KDLHHFILSMREGFR-KRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQA 133
Query: 371 LFAASDDDHDDLLSFDEIVE 390
L D L FD+ VE
Sbjct: 134 LMRKFDRQRRGSLGFDDYVE 153
Score = 40.4 bits (95), Expect = 3e-04
Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 45/189 (23%)
Query: 163 TKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWD 221
+ L + +D + I EL A L S S+ + D+N G + +D
Sbjct: 25 DNQELMEWFRAVDTDGSGAISVPELNA-ALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 83
Query: 222 EHLKETYGTEDADDIDVTNLGDDMNLLLLFTQM---VKQDKMIFNAADGDKNGVLDKTEY 278
E F + + + F D +G LD E
Sbjct: 84 E----------------------------FKDLHHFILSMREGFRKRDSSGDGRLDSNEV 115
Query: 279 QSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF--MGDRGQKHNRQYIVEEKDKFD 336
++ + + + ++ + D + G L F ++ + ++ F
Sbjct: 116 RA-ALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVC--------RVRNVF- 165
Query: 337 NEYDTNKDG 345
YD + G
Sbjct: 166 AFYDRERTG 174
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 54.4 bits (131), Expect = 7e-09
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 268 DKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQY 327
+G L E++ F + ++Q+ E D +KDG++ F E++ +
Sbjct: 27 CPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYV--AALSLVLKG 84
Query: 328 IVEEK-DKFDNEYDTNKDGLLNENEILSWIV-------PSNEDIAEEEVNHLFAASDDDH 379
V++K + YD + +G ++ E+L+ I + AEE N +F D +
Sbjct: 85 KVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDING 144
Query: 380 DDLLSFDEIVE 390
D LS +E +E
Sbjct: 145 DGELSLEEFME 155
Score = 42.5 bits (100), Expect = 7e-05
Identities = 40/237 (16%), Positives = 79/237 (33%), Gaps = 62/237 (26%)
Query: 173 NMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTED 232
NMD + E W + F E G + E K+ +G
Sbjct: 2 NMDSKAVEELSATECHQWY-KKFM--------------TECPSGQLTLYE-FKQFFG--- 42
Query: 233 ADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFP 292
+ NL N + + +F D +K+G +D EY +
Sbjct: 43 -----LKNLSPSANKYV---------EQMFETFDFNKDGYIDFMEYVA---------ALS 79
Query: 293 ILIKQVLEEK--------DTDKDGFLSFQEF------MGDRGQKHNRQYIVEEKDKFDNE 338
+++K +++K D D +G + E + + + E + ++
Sbjct: 80 LVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDK 139
Query: 339 YDTNKDGLLNENEILSWIVPSNEDIAE-----EEVNHLFAASDDDHDDLLSFDEIVE 390
D N DG L+ E + V +E + + ++ H+ +D + + +E E
Sbjct: 140 IDINGDGELSLEEFMEG-VQKDEVLLDILTRSLDLTHIVKLIQNDGKNPHAPEEAEE 195
Score = 40.9 bits (96), Expect = 3e-04
Identities = 30/164 (18%), Positives = 47/164 (28%), Gaps = 29/164 (17%)
Query: 162 LTKKRLRLLLKN-MDLNKDNNIDRKELQAWILRSFRMLSVEESNSR--FEDADENTDGVV 218
L+ K M + E + + FE D N DG +
Sbjct: 11 LSATECHQWYKKFMTECPSGQLTLYEFKQ-FFGLKNLSPSANKYVEQMFETFDFNKDGYI 69
Query: 219 DWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEY 278
D+ E++ + G L + F D D NG +D+ E
Sbjct: 70 DFMEYVAALS---------LVLKGKVDQKL----------RWYFKLYDVDGNGCIDRGEL 110
Query: 279 QSF------SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ V ++ D + DG LS +EFM
Sbjct: 111 LNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFM 154
Score = 35.1 bits (81), Expect = 0.022
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
+A L + +K ++LR K D++ + IDR EL I + E+ +
Sbjct: 75 VAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTN 134
Query: 207 --FEDADENTDGVVDWDE 222
F+ D N DG + +E
Sbjct: 135 MVFDKIDINGDGELSLEE 152
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 53.7 bits (129), Expect = 1e-08
Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 15/136 (11%)
Query: 268 DKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQY 327
+G L E++ + V D + DG + F+EF+ +
Sbjct: 38 CPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFI--IALSVTSRG 95
Query: 328 IVEEKDKFDNE-YDTNKDGLLNENEILSWIV------------PSNEDIAEEEVNHLFAA 374
+E+K K+ YD + +G +++ E+L + P +E E+ +F
Sbjct: 96 KLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQ 155
Query: 375 SDDDHDDLLSFDEIVE 390
D + D LS +E +
Sbjct: 156 MDTNRDGKLSLEEFIR 171
Score = 42.9 bits (101), Expect = 6e-05
Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 36/170 (21%)
Query: 162 LTKKRLRLLLKN-MDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-FEDADENTDGVVD 219
T+ ++ K + ++ +E + F + F D N DG +D
Sbjct: 22 FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTID 81
Query: 220 WDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKM--IFNAADGDKNGVLDKTE 277
+ E + L + ++ + K+ F+ D D NG + K E
Sbjct: 82 FREF---------------------IIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE 120
Query: 278 -----------YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
S E +++ + DT++DG LS +EF+
Sbjct: 121 MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI 170
Score = 37.1 bits (86), Expect = 0.004
Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 30/164 (18%)
Query: 222 EHLKETYGTEDAD-DIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQS 280
+ + + + + + + K + +F D + +G +D E+
Sbjct: 28 QEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFII 87
Query: 281 FSAPEEHPHMFPILIKQVLEEK--------DTDKDGFLSFQEFM----------GDRGQK 322
+ + LE+K D D +G++S E + +
Sbjct: 88 ---------ALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKM 138
Query: 323 HNRQYIVEEK-DKFDNEYDTNKDGLLNENEILSWIVPSNEDIAE 365
+ E++ +K + DTN+DG L+ E + S+ I
Sbjct: 139 PEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK-SDPSIVR 181
Score = 35.6 bits (82), Expect = 0.016
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 12/83 (14%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
I L + + +++L+ DL+ + I + E+ + ++M+S
Sbjct: 86 IIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTP 145
Query: 207 -------FEDADENTDGVVDWDE 222
F D N DG + +E
Sbjct: 146 EKRTEKIFRQMDTNRDGKLSLEE 168
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 53.0 bits (127), Expect = 5e-08
Identities = 34/263 (12%), Positives = 78/263 (29%), Gaps = 37/263 (14%)
Query: 151 PIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF-------RMLSVEES 203
+A +Q ++T + + + D + ++ KELQ +++ + E
Sbjct: 2 SMAESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQN-LIQELLQARKKAGLELSPEM 60
Query: 204 NSRFEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFN 263
+ + + DG + E E+ + +
Sbjct: 61 KTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEF----------MKTWR 110
Query: 264 AADGDKNGVLDKTEYQSF-------SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF- 315
D D +G ++ E ++F + +L+ D++ DG L E
Sbjct: 111 KYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMA 170
Query: 316 ------MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWI-----VPSNEDIA 364
+ + +E +K YD + +G ++ENE+ + + E
Sbjct: 171 RLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDI 230
Query: 365 EEEVNHLFAASDDDHDDLLSFDE 387
+ L +
Sbjct: 231 NNISTYKKNIMALSDGGKLYRTD 253
Score = 50.3 bits (120), Expect = 3e-07
Identities = 24/152 (15%), Positives = 48/152 (31%), Gaps = 21/152 (13%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSF-----SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQ 313
I+ D D +G L+ E Q+ A ++ +K +++ DG +
Sbjct: 19 FEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIV 78
Query: 314 EFMGDRGQKHNRQYIVEEKDKFDNE--------YDTNKDGLLNENEI--------LSWIV 357
E + N + + E YDT+ G + E+
Sbjct: 79 ELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANK 138
Query: 358 PSNEDIAEEEVNHLFAASDDDHDDLLSFDEIV 389
++ E + + D ++D L E+
Sbjct: 139 TVDDTKLAEYTDLMLKLFDSNNDGKLELTEMA 170
Score = 49.9 bits (119), Expect = 4e-07
Identities = 37/198 (18%), Positives = 68/198 (34%), Gaps = 31/198 (15%)
Query: 222 EHLKETYGTEDADD---IDVTNLGDDMNLLLLF-----TQMVKQDKMIFNAADGDKNGVL 273
E + DAD ++ L + + LL ++ + K + +G +
Sbjct: 16 SQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKI 75
Query: 274 DKTEYQSFSAPEEHPHMFPILIKQVLEEK--------DTDKDGFLSFQE---FMGDRGQK 322
E EE+ + + E+ DTD GF+ +E F+ D +K
Sbjct: 76 GIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEK 135
Query: 323 HNR----QYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP--------SNEDIAEEEVNH 370
N+ + E D +D+N DG L E+ + + +E N
Sbjct: 136 ANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNK 195
Query: 371 LFAASDDDHDDLLSFDEI 388
F D D + + +E+
Sbjct: 196 AFELYDQDGNGYIDENEL 213
Score = 31.4 bits (71), Expect = 0.40
Identities = 25/182 (13%), Positives = 51/182 (28%), Gaps = 26/182 (14%)
Query: 147 PWRNPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF---------RM 197
N + + Q ++ + + + D + I+ +EL+ L+
Sbjct: 86 TEENFLLLFRCQ-QLKSCEEFMKTWRKYDTDHSGFIETEELKN-FLKDLLEKANKTVDDT 143
Query: 198 LSVEESNSRFEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQ 257
E ++ + D N DG ++ E + E+
Sbjct: 144 KLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEF---------- 193
Query: 258 DKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEK----DTDKDGFLSFQ 313
F D D NG +D+ E + + + I + K G L
Sbjct: 194 -NKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRT 252
Query: 314 EF 315
+
Sbjct: 253 DL 254
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 51.3 bits (123), Expect = 8e-08
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 268 DKNGVLDKTEYQSFSA---PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHN 324
+G+ E+++ + + I QV DT+KDGF+ F EF+
Sbjct: 32 YPSGLQTLHEFKTLLGLQGLNQKANKH---IDQVYNTFDTNKDGFVDFLEFI--AAVNLI 86
Query: 325 RQYIVEEKDKFD-NEYDTNKDGLLNENEILS------WIVPSNEDIAEEEVNHLFAASDD 377
Q +E+K K+ YD + +G +++NE+L + EE +N +F D
Sbjct: 87 MQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDI 146
Query: 378 DHDDLLSFDEIVE 390
++D L+ +E +
Sbjct: 147 NNDGELTLEEFIN 159
Score = 44.4 bits (105), Expect = 2e-05
Identities = 30/170 (17%), Positives = 52/170 (30%), Gaps = 32/170 (18%)
Query: 157 MQMKILTKKRLRLLLKN-MDLNKDNNIDRKELQAWILRSFRMLSVEESNSR--FEDADEN 213
K + + + + M E + +L + + + D N
Sbjct: 11 GDQKAVPTQETHVWYRTFMMEYPSGLQTLHEFKT-LLGLQGLNQKANKHIDQVYNTFDTN 69
Query: 214 TDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKM--IFNAADGDKNG 271
DG VD+ E + + L Q + K+ F D D NG
Sbjct: 70 KDGFVDFLEFIA---------------------AVNLIMQEKMEQKLKWYFKLYDADGNG 108
Query: 272 VLDKTEYQS-----FSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+DK E + + I V + D + DG L+ +EF+
Sbjct: 109 SIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFI 158
Score = 37.5 bits (87), Expect = 0.004
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
IA + + M+ +++L+ K D + + +ID+ EL + + + +
Sbjct: 80 IAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINL 139
Query: 207 -FEDADENTDGVVDWDE 222
F D N DG + +E
Sbjct: 140 VFHKIDINNDGELTLEE 156
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 50.9 bits (122), Expect = 1e-07
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 14/135 (10%)
Query: 266 DGDKNGVLDKTEYQ-SFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHN 324
+G++ K E+Q + ++F ++ + D ++G + F EF+ G H
Sbjct: 49 SIIDDGLIHKEEFQLALFRNRNRRNLF---ADRIFDVFDVKRNGVIEFGEFVRSLGVFHP 105
Query: 325 RQYIVEEKDKFD-NEYDTNKDGLLNENEILSWI--------VPSNEDIAEEEVNHLFAAS 375
V EK KF YD + G + E+ + + +ED+ E V+ F +
Sbjct: 106 SA-PVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQA 164
Query: 376 DDDHDDLLSFDEIVE 390
D +D + DE +
Sbjct: 165 DRKNDGKIDIDEWKD 179
Score = 36.3 bits (84), Expect = 0.008
Identities = 24/161 (14%), Positives = 55/161 (34%), Gaps = 28/161 (17%)
Query: 165 KRLRLLLKNMDLNKDNN--IDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE 222
+ L L K + + ++ I ++E Q L R ++ F+ D +GV+++ E
Sbjct: 37 EALYELFKKLSSSIIDDGLIHKEEFQL-ALFRNRNRRNLFADRIFDVFDVKRNGVIEFGE 95
Query: 223 HLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTE----- 277
+ + + + ++ K F D + G +++ E
Sbjct: 96 FV------------------RSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
Query: 278 --YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
S M +++ + + D DG + E+
Sbjct: 138 VALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK 178
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 50.6 bits (121), Expect = 1e-07
Identities = 28/144 (19%), Positives = 56/144 (38%), Gaps = 23/144 (15%)
Query: 266 DGDKNGVLDKTEYQSFSAPEEHPHMFP-ILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHN 324
+ +G L E++ F + + ++ + DT+ D + F E++
Sbjct: 33 EECPSGTLFMHEFKRF--FKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYV--AALNLV 88
Query: 325 RQYIVEEKDKFD-NEYDTNKDGLLNENEILSWIV-----------------PSNEDIAEE 366
+ +E K K+ YD +++G ++ E+L + EE
Sbjct: 89 LRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEE 148
Query: 367 EVNHLFAASDDDHDDLLSFDEIVE 390
V+ +F D++ D LS +E VE
Sbjct: 149 VVDRIFLLVDENGDGQLSLNEFVE 172
Score = 42.1 bits (99), Expect = 1e-04
Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 39/161 (24%)
Query: 174 MDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTEDA 233
++ + E + + + + + F D N D +D+ E++
Sbjct: 32 LEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYV--------- 82
Query: 234 DDIDVTNLGDDMNLLLLFTQMVKQDKM--IFNAADGDKNGVLDKTE-------------- 277
L L + + K+ F D D+NG +D+ E
Sbjct: 83 ------------AALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKA 130
Query: 278 --YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ + + ++ ++ D + DG LS EF+
Sbjct: 131 CSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
Score = 36.3 bits (84), Expect = 0.009
Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 302 KDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
+ G L EF + QY+ + +DTN D ++ E ++ +
Sbjct: 32 LEECPSGTLFMHEFKRFFKVPDNEEATQYV----EAMFRAFDTNGDNTIDFLEYVAALNL 87
Query: 359 SNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
E ++ F D D + + E+++
Sbjct: 88 VLRGTLEHKLKWTFKIYDKDRNGCIDRQELLD 119
Score = 34.0 bits (78), Expect = 0.051
Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 17/88 (19%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
+A L + ++ + +L+ K D +++ IDR+EL + +++
Sbjct: 82 VAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQG 141
Query: 207 ------------FEDADENTDGVVDWDE 222
F DEN DG + +E
Sbjct: 142 KLLTPEEVVDRIFLLVDENGDGQLSLNE 169
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 50.7 bits (121), Expect = 2e-07
Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 29/191 (15%)
Query: 136 KHGSYALFECYPWRNPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF 195
K G A W + + K+R L K D N+ + E+ + L
Sbjct: 19 KDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVL 78
Query: 196 ----------RMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDM 245
+ SR + G D+ E L+ + + + D
Sbjct: 79 KLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFR--------LMLCYIYDFF 130
Query: 246 NLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTD 305
L ++F ++ D N ++D+ E++ E + +E D +
Sbjct: 131 ELTVMFDEI-----------DASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKN 179
Query: 306 KDGFLSFQEFM 316
G ++F EF
Sbjct: 180 GTGSVTFDEFA 190
Score = 46.8 bits (111), Expect = 3e-06
Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 11/145 (7%)
Query: 253 QMVKQDKMIFNAADGDKNGVLDKTE---------YQSFSAPEEHPHMFPILIKQVLEEKD 303
+ ++ +F D ++ G L E K
Sbjct: 45 EAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSK 104
Query: 304 TDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEI-LSWIVPSNED 362
+ G F EF+ R E FD E D + + L++E E +
Sbjct: 105 LENKGSEDFVEFLEFRLMLCYIYDFFELTVMFD-EIDASGNMLVDEEEFKRAVPKLEAWG 163
Query: 363 IAEEEVNHLFAASDDDHDDLLSFDE 387
E+ LF D + ++FDE
Sbjct: 164 AKVEDPAALFKELDKNGTGSVTFDE 188
Score = 44.1 bits (104), Expect = 2e-05
Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 28/182 (15%)
Query: 207 FEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAAD 266
F+ D+N G + +DE + D + + D DK +
Sbjct: 54 FKKFDKNETGKLCYDE-VYSGCLEVLKLDEFTSRVRDITKRAF--------DKSRTLGSK 104
Query: 267 GDKNGVLDKTEYQSFSAP------EEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MG 317
+ G D E+ F + + +E D + + +EF +
Sbjct: 105 LENKGSEDFVEFLEFRLMLCYIYDFFE-------LTVMFDEIDASGNMLVDEEEFKRAVP 157
Query: 318 DRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDD 377
+ VE+ E D N G + +E +W D + N +A +
Sbjct: 158 KLEAWGAK---VEDPAALFKELDKNGTGSVTFDEFAAWASAVKLDADGDPDNVPESALEH 214
Query: 378 DH 379
H
Sbjct: 215 HH 216
Score = 33.7 bits (77), Expect = 0.063
Identities = 12/103 (11%), Positives = 30/103 (29%), Gaps = 9/103 (8%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF----MGDRGQKHNRQYIVE-----EKDKFDNEYDTNKDG 345
++ ++ D ++ G L + E + + + G
Sbjct: 50 RIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKG 109
Query: 346 LLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEI 388
+ E L + + E+ +F D + L+ +E
Sbjct: 110 SEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEF 152
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 49.8 bits (119), Expect = 3e-07
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 28/156 (17%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQ 321
F + D +NG L + ++Q +P L +++ ++ + ++F+ FM
Sbjct: 35 FTSLDKGENGTLSREDFQRIPELAINP-----LGDRIINAFFSEGEDQVNFRGFMRTLAH 89
Query: 322 KHNRQYIVEEKDKFDNE---------------YDTNKDGLLNENE---ILSWIVPSN--E 361
+ + KD E YD +KD ++ +E +L +V N +
Sbjct: 90 FRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISD 149
Query: 362 DIAEEEVNHLFAASDDDHDDLLSFDE---IVEHHDV 394
+ + +D D D +SF E ++E DV
Sbjct: 150 EQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDV 185
Score = 40.5 bits (95), Expect = 4e-04
Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 31/166 (18%)
Query: 165 KRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-FEDADENTDGVVDWDE- 222
RL ++D ++ + R++ Q L++ R + V++
Sbjct: 29 TRLYSRFTSLDKGENGTLSREDFQ-----RIPELAINPLGDRIINAFFSEGEDQVNFRGF 83
Query: 223 -----HLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTE 277
H + E + D++ + + L F F D DK+ + + E
Sbjct: 84 MRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHF---------AFRLYDLDKDDKISRDE 134
Query: 278 YQSF-------SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ +E + + ++E D D D +SF EF+
Sbjct: 135 LLQVLRMMVGVNISDEQLGS---IADRTIQEADQDGDSAISFTEFV 177
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 48.6 bits (116), Expect = 6e-07
Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 29/157 (18%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM----- 316
F A D +K G L + + Q A +P L +++E D + F F+
Sbjct: 35 FRALDRNKKGYLSRMDLQQIGALAVNP-----LGDRIIESFFPDGSQRVDFPGFVRVLAH 89
Query: 317 ----GDRGQKHNRQYIVEEKDKFDNE-------YDTNKDGLLNENE---ILSWIVPSN-- 360
D + E + N+ YD ++DG ++ +E +L +V
Sbjct: 90 FRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVT 149
Query: 361 EDIAEEEVNHLFAASDDDHDDLLSFDE---IVEHHDV 394
E+ E + +D+D D +SF E +E DV
Sbjct: 150 EEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDV 186
Score = 41.3 bits (97), Expect = 2e-04
Identities = 37/168 (22%), Positives = 53/168 (31%), Gaps = 34/168 (20%)
Query: 165 KRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-FEDADENTDGVVDWDE- 222
RL + +D NK + R +LQ L+V R E + VD+
Sbjct: 29 LRLHHRFRALDRNKKGYLSRMDLQ-----QIGALAVNPLGDRIIESFFPDGSQRVDFPGF 83
Query: 223 -------HLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDK 275
E TE D L N L F D D++G + +
Sbjct: 84 VRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKL----------HYAFQLYDLDRDGKISR 133
Query: 276 TEYQSF-------SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
E EE + + ++E D D DG +SF EF
Sbjct: 134 HEMLQVLRLMVGVQVTEEQLEN---IADRTVQEADEDGDGAVSFVEFT 178
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 48.7 bits (116), Expect = 6e-07
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 15/136 (11%)
Query: 268 DKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQY 327
+G LD +Q V D +KDG + F EF+ + +
Sbjct: 38 CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFI--QALSVTSRG 95
Query: 328 IVEEKDKFD-NEYDTNKDGLLNENEILSWI------------VPSNEDIAEEEVNHLFAA 374
++EK ++ YD + DG + NE+L + +P E+ E+ V+ +FA
Sbjct: 96 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAM 155
Query: 375 SDDDHDDLLSFDEIVE 390
D + D L+ E E
Sbjct: 156 MDKNADGKLTLQEFQE 171
Score = 41.8 bits (98), Expect = 1e-04
Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 16/157 (10%)
Query: 175 DLNKDNNIDRKELQAWILRSFRMLSVEESNSR--FEDADENTDGVVDWDEHLKETYGTED 232
+L + KE+Q W + F F+ + D + + D
Sbjct: 15 ELTRKTYFTEKEVQQWY-KGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFD 73
Query: 233 ADDIDVTNLGDDMNLLLLFTQMVKQDKM--IFNAADGDKNGVLDKTEYQSF--SAPEEHP 288
+ + + L + ++ +K+ F D D +G + + E + +
Sbjct: 74 ENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVG 133
Query: 289 HMFPI---------LIKQVLEEKDTDKDGFLSFQEFM 316
+ + + ++ D + DG L+ QEF
Sbjct: 134 NTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQ 170
Score = 36.4 bits (84), Expect = 0.008
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 29/124 (23%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEK--------DTDKDGFLSF 312
+FN D +K+G ++ +E+ + + L+EK D D DG+++
Sbjct: 68 VFNVFDENKDGRIEFSEFI---------QALSVTSRGTLDEKLRWAFKLYDLDNDGYITR 118
Query: 313 QEFM----------GDRGQKHNRQYIVEEK-DKFDNEYDTNKDGLLNENEILSWIVPSNE 361
E + G+ + + E++ D+ D N DG L E ++
Sbjct: 119 NEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK-ADP 177
Query: 362 DIAE 365
I +
Sbjct: 178 SIVQ 181
Score = 33.7 bits (77), Expect = 0.069
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 12/83 (14%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
I L + + ++LR K DL+ D I R E+ + ++M+
Sbjct: 86 IQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTP 145
Query: 207 -------FEDADENTDGVVDWDE 222
F D+N DG + E
Sbjct: 146 EKRVDRIFAMMDKNADGKLTLQE 168
Score = 30.2 bits (68), Expect = 0.78
Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 7/113 (6%)
Query: 170 LLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYG 229
+ D NKD I+ E + + R E+ F+ D + DG + +E
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE------- 120
Query: 230 TEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFS 282
D D +G+ + L K+ IF D + +G L E+Q S
Sbjct: 121 MLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGS 173
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural
genomics, seattle S genomics center for infectious
disease, ssgcid; 1.90A {Entamoeba histolytica} PDB:
3sia_A 3sib_A
Length = 220
Score = 49.0 bits (117), Expect = 6e-07
Identities = 23/140 (16%), Positives = 41/140 (29%), Gaps = 25/140 (17%)
Query: 259 KMIFNAADGDKNGVLDKTEYQ--------SFSAPEEHPHMFPILIKQVLEEKDTDKDGFL 310
F D D++G L+ E S +++ DTD +G +
Sbjct: 54 YQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQT---------ALRMMRIFDTDFNGHI 104
Query: 311 SFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNH 370
SF EF +++ + F + G L +EIL + I +
Sbjct: 105 SFYEF------MAMYKFMELAYNLF-VMNARARSGTLEPHEILPALQQLGFYINQRTSLL 157
Query: 371 LFAASDDDHDDLLSFDEIVE 390
L + +
Sbjct: 158 LHRL-FARGMAFCDLNCWIA 176
Score = 48.2 bits (115), Expect = 1e-06
Identities = 18/155 (11%), Positives = 41/155 (26%), Gaps = 33/155 (21%)
Query: 165 KRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHL 224
R+ +D ++ ++ EL LS + + D + +G + + E
Sbjct: 51 TRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYE-- 108
Query: 225 KETYGTEDADDIDVTNLGDDMNLLLLFTQM---VKQDKMIFNAADGDKNGVLDKTEYQSF 281
F M ++ +F ++G L+ E
Sbjct: 109 --------------------------FMAMYKFMELAYNLFVMNARARSGTLEPHEIL-- 140
Query: 282 SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
A ++ +L F ++
Sbjct: 141 PALQQLGFYINQRTSLLLHRLFARGMAFCDLNCWI 175
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 48.4 bits (116), Expect = 8e-07
Identities = 21/157 (13%), Positives = 50/157 (31%), Gaps = 25/157 (15%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEH 223
++L+ +D + I +++L+ L + + + D + G +D+ E
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKK-GLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEF 109
Query: 224 LKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQ---- 279
+ + + F D D +G + E
Sbjct: 110 IAAALDRKQLSKKLI--------------------YCAFRVFDVDNDGEITTAELAHILY 149
Query: 280 SFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ + +K+++ + D + DG + F EF
Sbjct: 150 NGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Score = 39.5 bits (93), Expect = 7e-04
Identities = 25/142 (17%), Positives = 49/142 (34%), Gaps = 25/142 (17%)
Query: 259 KMIFNAADGDKNGVLDKTE----YQS--FSAPEEHPHMFPILIKQVLEEKDTDKDGFLSF 312
K F D D G + K + + P +L++ D+D G + +
Sbjct: 55 KSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYN--------FDLLLDQIDSDGSGKIDY 106
Query: 313 QEF--MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNE-----DIAE 365
EF ++ +++ I F +D + DG + E+ + N+
Sbjct: 107 TEFIAAALDRKQLSKKLI---YCAF-RVFDVDNDGEITTAELAHILYNGNKKGNITQRDV 162
Query: 366 EEVNHLFAASDDDHDDLLSFDE 387
V + D ++D + F E
Sbjct: 163 NRVKRMIRDVDKNNDGKIDFHE 184
Score = 33.8 bits (78), Expect = 0.049
Identities = 14/94 (14%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILS 354
+K D D G+++ ++ +G + + + D ++ D++ G ++ E ++
Sbjct: 54 LKSTFLVLDEDGKGYITKEQLK--KGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIA 111
Query: 355 WIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEI 388
+ + +++ + F D D+D ++ E+
Sbjct: 112 AALDRKQL-SKKLIYCAFRVFDVDNDGEITTAEL 144
Score = 33.0 bits (76), Expect = 0.090
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 157 MQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF------RMLSVEESNSRFEDA 210
+ K L+KK + + D++ D I EL IL + V D
Sbjct: 114 LDRKQLSKKLIYCAFRVFDVDNDGEITTAELAH-ILYNGNKKGNITQRDVNRVKRMIRDV 172
Query: 211 DENTDGVVDWDE 222
D+N DG +D+ E
Sbjct: 173 DKNNDGKIDFHE 184
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 48.0 bits (115), Expect = 1e-06
Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 20/154 (12%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEH 223
LR + +D++ + +E+ + + + + D D N G + + +
Sbjct: 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDF 115
Query: 224 LKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQS-FS 282
L T ID L+ F F D D NG + E + F
Sbjct: 116 LAAT--------IDKQTYLKKEVCLIPFK--------FF---DIDGNGKISVEELKRIFG 156
Query: 283 APEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ + I +L+E D + DG + F EFM
Sbjct: 157 RDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM 190
Score = 41.0 bits (97), Expect = 2e-04
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 26/142 (18%)
Query: 259 KMIFNAADGDKNGVLDKTE--------YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFL 310
+ IF A D D +G L E P+ I QVL + D++ G +
Sbjct: 60 RNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPD---------IHQVLRDIDSNASGQI 110
Query: 311 SFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSN--EDIAE 365
+ +F D+ ++ + FD + +G ++ E+ + + +
Sbjct: 111 HYTDFLAATIDKQTYLKKEVCLIPFKFFD----IDGNGKISVEELKRIFGRDDIENPLID 166
Query: 366 EEVNHLFAASDDDHDDLLSFDE 387
+ ++ L D + D + F E
Sbjct: 167 KAIDSLLQEVDLNGDGEIDFHE 188
Score = 37.6 bits (88), Expect = 0.003
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
++ + D D G LS QE + G + + + + D+N G ++ +
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIP----PDIHQVLRDIDSNASGQIHYTD 114
Query: 352 ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEI 388
L+ + + +E F D D + +S +E+
Sbjct: 115 FLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEEL 151
Score = 34.1 bits (79), Expect = 0.049
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 158 QMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRM---LSVEESNSRFEDADENT 214
+ L K+ + K D++ + I +EL+ I + L + +S ++ D N
Sbjct: 122 KQTYLKKEVCLIPFKFFDIDGNGKISVEELKR-IFGRDDIENPLIDKAIDSLLQEVDLNG 180
Query: 215 DGVVDWDE 222
DG +D+ E
Sbjct: 181 DGEIDFHE 188
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 46.4 bits (111), Expect = 1e-06
Identities = 31/149 (20%), Positives = 63/149 (42%), Gaps = 29/149 (19%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDEHLKETYGT 230
K +D+N D + +E++A + + + + F+ D + +G +D +E K
Sbjct: 7 KEIDVNGDGAVSYEEVKA-FVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 231 EDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAP---EEH 287
+ D D D + L K+++ D D +G L K E SF E+
Sbjct: 66 QGQDLSD-----DKIGL-----------KVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK- 108
Query: 288 PHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ + + + D + DG+++ +EF+
Sbjct: 109 -------VAEQVMKADANGDGYITLEEFL 130
Score = 43.7 bits (104), Expect = 1e-05
Identities = 23/147 (15%), Positives = 49/147 (33%), Gaps = 26/147 (17%)
Query: 254 MVKQDKMIFNAADGDKNGVLDKTEY--------QSFSAPEEHPHMFPILIKQVLEEKDTD 305
M + +F D + +G + E + ++ + + D D
Sbjct: 1 MAEA---LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQL---------LQLIFKSIDAD 48
Query: 306 KDGFLSFQEFMGDRGQKHNRQYIVEEKDKFD--NEYDTNKDGLLNENEILSWIVPSNEDI 363
+G + EF G + ++ D + DG L + E+ S +
Sbjct: 49 GNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTS----FFKKH 104
Query: 364 AEEEVNHLFAASDDDHDDLLSFDEIVE 390
E+V +D + D ++ +E +E
Sbjct: 105 GIEKVAEQVMKADANGDGYITLEEFLE 131
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 48.0 bits (114), Expect = 1e-06
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 15/136 (11%)
Query: 268 DKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQY 327
+GV+++ ++ + + DTD +G +SF++F+ +G +
Sbjct: 77 CPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFI--KGLSILLRG 134
Query: 328 IVEEKDKFD-NEYDTNKDGLLNENEILSWI------------VPSNEDIAEEEVNHLFAA 374
V+EK + N YD NKDG + + E+L + ED + V F
Sbjct: 135 TVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQK 194
Query: 375 SDDDHDDLLSFDEIVE 390
D + D +++ DE +E
Sbjct: 195 MDKNKDGVVTIDEFIE 210
Score = 43.3 bits (102), Expect = 5e-05
Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 36/170 (21%)
Query: 162 LTKKRLRLLLKN-MDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-FEDADENTDGVVD 219
TKK L++L + + ++ + + + F F D + +G V
Sbjct: 61 FTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVS 120
Query: 220 WDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKM--IFNAADGDKNGVLDKTE 277
+++ +K L + + Q+K+ FN D +K+G + K E
Sbjct: 121 FEDFIK---------------------GLSILLRGTVQEKLNWAFNLYDINKDGYITKEE 159
Query: 278 YQSF-----------SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ P ++ ++ D +KDG ++ EF+
Sbjct: 160 MLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFI 209
Score = 39.9 bits (93), Expect = 7e-04
Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 30/208 (14%)
Query: 178 KDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTEDAD-DI 236
+ + L+ + M +V E + + + L + E +
Sbjct: 23 EQFGLIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNECPSGVV 82
Query: 237 DVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIK 296
+ + + +FNA D D NG + ++ IL++
Sbjct: 83 NEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDF---------IKGLSILLR 133
Query: 297 QVLEEK--------DTDKDGFLSFQEF----------MGDRGQKHNRQYIVEEK-DKFDN 337
++EK D +KDG+++ +E MG ++ + + F
Sbjct: 134 GTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQ 193
Query: 338 EYDTNKDGLLNENEILSWIVPSNEDIAE 365
+ D NKDG++ +E + +E+I
Sbjct: 194 KMDKNKDGVVTIDEFIESCQ-KDENIMR 220
Score = 37.6 bits (87), Expect = 0.004
Identities = 14/89 (15%), Positives = 37/89 (41%)
Query: 302 KDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNE 361
K+ G ++ + F Q + N +DT+ +G ++ + + +
Sbjct: 74 KNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLR 133
Query: 362 DIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+E++N F D + D ++ +E+++
Sbjct: 134 GTVQEKLNWAFNLYDINKDGYITKEEMLD 162
Score = 34.5 bits (79), Expect = 0.045
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
I GL + ++ +++L D+NKD I ++E+ + + M+
Sbjct: 125 IKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAP 184
Query: 207 -------FEDADENTDGVVDWDE 222
F+ D+N DGVV DE
Sbjct: 185 RQHVETFFQKMDKNKDGVVTIDE 207
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 46.7 bits (111), Expect = 2e-06
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 268 DKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQY 327
+G L+K+E+Q + V D DK+G++ F+EF+ +
Sbjct: 38 CPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFI--CALSVTSRG 95
Query: 328 IVEEKDKFDNE-YDTNKDGLLNENEILSWI------------VPSNEDIAEEEVNHLFAA 374
+ +K + + YD + +GL++ +E+L + +P +ED E+ VN +F
Sbjct: 96 ELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNM 155
Query: 375 SDDDHDDLLSFDEIVE 390
D + D L+ +E E
Sbjct: 156 MDKNKDGQLTLEEFCE 171
Score = 44.0 bits (104), Expect = 2e-05
Identities = 34/174 (19%), Positives = 61/174 (35%), Gaps = 22/174 (12%)
Query: 158 QMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR--FEDADENTD 215
L++ +L DL + D+KELQ W + F ++ F+ +
Sbjct: 4 SQSKLSQDQL------QDLVRSTRFDKKELQQWY-KGFFKDCPSGHLNKSEFQKIYKQFF 56
Query: 216 GVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKM--IFNAADGDKNGVL 273
D + + DAD + + + L + ++ DK+ F D D NG++
Sbjct: 57 PFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLI 116
Query: 274 DKTE-----------YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
E S E + ++ D +KDG L+ +EF
Sbjct: 117 SYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
Score = 34.4 bits (79), Expect = 0.037
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 12/86 (13%)
Query: 149 RNPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-- 206
+ I L + + +L + DL+ + I E+ + ++M+
Sbjct: 83 KEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDE 142
Query: 207 ----------FEDADENTDGVVDWDE 222
F D+N DG + +E
Sbjct: 143 DTPEKRVNKIFNMMDKNKDGQLTLEE 168
Score = 31.7 bits (72), Expect = 0.26
Identities = 25/152 (16%), Positives = 48/152 (31%), Gaps = 31/152 (20%)
Query: 162 LTKKRLRLLLKN-MDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-FEDADENTDGVVD 219
KK L+ K ++++ E Q + F F D + +G +D
Sbjct: 22 FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYID 81
Query: 220 ---------------WDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQD------ 258
++ L + D D+ + + + + ++ +MV
Sbjct: 82 FKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPED 141
Query: 259 --------KMIFNAADGDKNGVLDKTEYQSFS 282
IFN D +K+G L E+ S
Sbjct: 142 EDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGS 173
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 46.5 bits (111), Expect = 2e-06
Identities = 24/141 (17%), Positives = 58/141 (41%), Gaps = 25/141 (17%)
Query: 259 KMIFNAADGDKNGVLDKTE---------YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGF 309
+F D D++GV+ TE + F+ ++ ++ D +
Sbjct: 10 WNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVT---------VRSIISMFDRENKAG 60
Query: 310 LSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVN 369
++F EF +YI + ++ F YD + G++++NE+ + ++++ +
Sbjct: 61 VNFSEF------TGVWKYITDWQNVFR-TYDRDNSGMIDKNELKQALSGFGYRLSDQFHD 113
Query: 370 HLFAASDDDHDDLLSFDEIVE 390
L D ++FD+ ++
Sbjct: 114 ILIRKFDRQGRGQIAFDDFIQ 134
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 47.1 bits (112), Expect = 3e-06
Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 266 DGDKNGVLDKTEYQ-SFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHN 324
+G+++K E+Q + + +F +V + DT +G L F+EF H
Sbjct: 60 AVIDDGLINKEEFQLALFKTNKKESLF---ADRVFDLFDTKHNGILGFEEFARALSVFHP 116
Query: 325 RQYIVEEKDKFD-NEYDTNKDGLLNENEILSWIV--------PSNEDIAEEEVNHLFAAS 375
+++K F YD + G + E+ +V + + E+ ++ F +
Sbjct: 117 N-APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEA 175
Query: 376 DDDHDDLLSFDEIVE 390
D HD + +E
Sbjct: 176 DTKHDGKIDKEEWRS 190
Score = 41.0 bits (96), Expect = 3e-04
Identities = 27/190 (14%), Positives = 57/190 (30%), Gaps = 16/190 (8%)
Query: 142 LFECYPWRNPIAGLKMQMKILTKKRLRLLLKNM-DLNKDNNIDRKELQAWILRSFRMLSV 200
+ +C + + L + L + L +D E++A F+ +S
Sbjct: 1 MSQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALY-ELFKKISS 59
Query: 201 EESNSRFEDADENTDGV----VDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVK 256
+ + +E + + D + + L +F
Sbjct: 60 AVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP 119
Query: 257 QD---KMIFNAADGDKNGVLDKTEYQSF-------SAPEEHPHMFPILIKQVLEEKDTDK 306
D F D + G +++ E + S + +I + EE DT
Sbjct: 120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKH 179
Query: 307 DGFLSFQEFM 316
DG + +E+
Sbjct: 180 DGKIDKEEWR 189
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 46.3 bits (110), Expect = 4e-06
Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 21/161 (13%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSA----------PEEHPHMFPILIKQVLEEKDTDKDG 308
K +FN D + NG + E ++ PE+ ++
Sbjct: 19 KHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQ-AKRHKDAVEAFFGGAGMKYGV 77
Query: 309 FLSFQEF-------MGDRGQKHNRQYIVEEKDKFD---NEYDTNKDGLLNENEILSWIVP 358
+ + D +K+ + + D + D +++G + +E ++
Sbjct: 78 ETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKA 137
Query: 359 SNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSE 399
+ + E+ F D D L DE+ H F +
Sbjct: 138 AGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTM 178
Score = 44.4 bits (105), Expect = 1e-05
Identities = 24/163 (14%), Positives = 55/163 (33%), Gaps = 19/163 (11%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRS-FRML----SVEESNSRFEDADENTDGV- 217
R + + +D+N + I E+ L + + +A G+
Sbjct: 15 IGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMK 74
Query: 218 ----VDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVL 273
DW +++ + A D ++ L+ ++ + F+ D D+NG +
Sbjct: 75 YGVETDWPAYIEGW--KKLATDELEKYAKNEPTLIRIWGDAL------FDIVDKDQNGAI 126
Query: 274 DKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
E+++++ ++ D D+ G L E
Sbjct: 127 TLDEWKAYTKAAGII-QSSEDCEETFRVCDIDESGQLDVDEMT 168
Score = 35.2 bits (81), Expect = 0.023
Identities = 14/63 (22%), Positives = 26/63 (41%)
Query: 160 KILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVD 219
L + L +D +++ I E +A+ + + S E+ F D + G +D
Sbjct: 104 PTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLD 163
Query: 220 WDE 222
DE
Sbjct: 164 VDE 166
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 45.3 bits (108), Expect = 4e-06
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQ 321
F D D +G L E+ S +++P L+++V++ DTD +G + F+EF+ Q
Sbjct: 12 FKKLDLDNSGSLSVEEFMSLPELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIEGVSQ 66
Query: 322 KHNRQYIVEEKDKFDNEYDTNKDGLLNENE---ILSWIVPSN--EDIAEEEVNHLFAASD 376
+ ++ YD +KDG ++ E +L +V +N + ++ V+ +D
Sbjct: 67 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 126
Query: 377 DDHDDLLSFDE 387
D D +SF+E
Sbjct: 127 KDGDGRISFEE 137
Score = 36.1 bits (84), Expect = 0.007
Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 34/160 (21%)
Query: 165 KRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-FEDADENTDGVVDWDEH 223
KRL K +DL+ ++ +E + L R + D + +G VD+ E
Sbjct: 6 KRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTDGNGEVDFKEF 60
Query: 224 LKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMI---FNAADGDKNGVLDKTEYQS 280
+ + F+ +++ + F D DK+G + E
Sbjct: 61 I---------------------EGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 99
Query: 281 FSAPEEHPHM----FPILIKQVLEEKDTDKDGFLSFQEFM 316
++ ++ + + D D DG +SF+EF
Sbjct: 100 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFC 139
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 45.4 bits (108), Expect = 7e-06
Identities = 26/152 (17%), Positives = 60/152 (39%), Gaps = 19/152 (12%)
Query: 249 LLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPIL----------IKQV 298
L + K+ IF D + +G LD+ E + + +
Sbjct: 33 LTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHI 92
Query: 299 LEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSW 355
L+ D D++G++ + EF D+ +R+ ++ +FD ++ G + E+
Sbjct: 93 LQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFD----SDGSGKITNEELGR- 147
Query: 356 IVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+ ++ +E + + D ++D + F+E
Sbjct: 148 -LFGVTEVDDETWHQVLQECDKNNDGEVDFEE 178
Score = 44.6 bits (106), Expect = 1e-05
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 33/164 (20%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFR-----------MLSVEESNSRFEDADE 212
K L + + +D N D +DRKEL + + E + + D
Sbjct: 39 TKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDF 98
Query: 213 NTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGV 272
+ +G +++ E + +D L LL F F D D +G
Sbjct: 99 DRNGYIEYSEFVTVC--------MDKQLLLSRERLLAAFQ--------QF---DSDGSGK 139
Query: 273 LDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ E E + QVL+E D + DG + F+EF+
Sbjct: 140 ITNEELGRLFGVTE---VDDETWHQVLQECDKNNDGEVDFEEFV 180
Score = 37.3 bits (87), Expect = 0.004
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 13/118 (11%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF----------MGDRGQKHNRQYIVEEKDKFDNEYDTNKD 344
+ Q+ + D + DG L +E GD + I E D D +++
Sbjct: 42 LTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRN 101
Query: 345 GLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATD 402
G + +E ++ + ++ E + F D D ++ +E+ +F +E D
Sbjct: 102 GYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL---GRLFGVTEVDD 156
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 47.0 bits (111), Expect = 1e-05
Identities = 39/220 (17%), Positives = 64/220 (29%), Gaps = 88/220 (40%)
Query: 220 W---DEHLKETYGTEDADDIDVTNLGDDMNLLLLFT----QMVKQ--DKMIF-NAADGDK 269
W D H K+TYG DI + N +NL + F + +++ MIF DG
Sbjct: 1646 WNRADNHFKDTYG-FSILDIVINN---PVNLTIHFGGEKGKRIRENYSAMIFETIVDGKL 1701
Query: 270 ---------------------NGVLDKTEY-QSFSAPEEHPHMF--PILIKQVLEEK-DT 304
G+L T++ Q P + + L+ K
Sbjct: 1702 KTEKIFKEINEHSTSYTFRSEKGLLSATQFTQ--------PALTLMEKAAFEDLKSKGLI 1753
Query: 305 DKD------------------GFLSFQE-----FMGDRGQKHNRQYIVEEKDKFDNEY-- 339
D +S + F RG Q V + + Y
Sbjct: 1754 PADATFAGHSLGEYAALASLADVMSIESLVEVVFY--RGMT--MQVAVPRDELGRSNYGM 1809
Query: 340 ---DTNKDGLLNENEILSWIVPSNEDIAEEE------VNH 370
+ + E L ++V E + + VN+
Sbjct: 1810 IAINPGRVAASFSQEALQYVV---ERVGKRTGWLVEIVNY 1846
Score = 31.6 bits (71), Expect = 0.59
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 12/51 (23%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEE 202
AG + L + ++ K ID ELQ S + VE
Sbjct: 1855 AAG--------DLRALDTVTNVLNFIKLQKIDIIELQK----SLSLEEVEG 1893
Score = 29.2 bits (65), Expect = 3.5
Identities = 12/96 (12%), Positives = 31/96 (32%), Gaps = 18/96 (18%)
Query: 332 KDKFDNEYDTNKDGLLNENEILSWI-------------VPSNEDIAEEEVNHLFAASDDD 378
+++F+ +G ++E + V ++ ++V L +
Sbjct: 34 QEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQV--LNLCLTEF 91
Query: 379 HDDLLSFDEIVEHHDVFVGSEATDFGDHLTNPHLIK 414
+ L ++I H + + + LIK
Sbjct: 92 ENCYLEGNDI---HALAAKLLQENDTTLVKTKELIK 124
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 44.8 bits (106), Expect = 1e-05
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 269 KNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYI 328
+GV+++ ++ A + DT + G + F++F+
Sbjct: 32 PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT-- 89
Query: 329 VEEKDKFD-NEYDTNKDGLLNENEILSWI------------VPSNEDIAEEEVNHLFAAS 375
V EK ++ N YD NKDG +N+ E++ + ED + V+ F
Sbjct: 90 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 149
Query: 376 DDDHDDLLSFDEIVE 390
D + D +++ DE +E
Sbjct: 150 DKNKDGIVTLDEFLE 164
Score = 42.5 bits (100), Expect = 7e-05
Identities = 27/173 (15%), Positives = 57/173 (32%), Gaps = 42/173 (24%)
Query: 162 LTKKRLRLLLKN-MDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-FEDADENTDGVVD 219
TK+ L++L + + ++ + + + F F D G V
Sbjct: 15 FTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVK 74
Query: 220 WDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKM--IFNAADGDKNGVLDKTE 277
+++ + L + + +K+ FN D +K+G ++K E
Sbjct: 75 FEDF---------------------VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEE 113
Query: 278 --------------YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
Y E+ P + ++ D +KDG ++ EF+
Sbjct: 114 MMDIVKAIYDMMGKYTYPVLKEDTPRQ---HVDVFFQKMDKNKDGIVTLDEFL 163
Score = 34.8 bits (80), Expect = 0.026
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
+ L + ++ ++LR D+NKD I+++E+ + + M+
Sbjct: 79 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTP 138
Query: 207 -------FEDADENTDGVVDWDE 222
F+ D+N DG+V DE
Sbjct: 139 RQHVDVFFQKMDKNKDGIVTLDE 161
Score = 30.9 bits (70), Expect = 0.52
Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 7/112 (6%)
Query: 170 LLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYG 229
L D + ++ ++ + R E+ F D N DG ++ +E +
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 230 TEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSF 281
D + + Q V F D +K+G++ E+
Sbjct: 121 IYDMMGKYTYPVLKEDTP----RQHVDV---FFQKMDKNKDGIVTLDEFLES 165
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 45.0 bits (106), Expect = 1e-05
Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 15/136 (11%)
Query: 268 DKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQY 327
+GV+++ ++ A + DT + G + F++F+ +
Sbjct: 64 CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV--TALSILLRG 121
Query: 328 IVEEKDKFD-NEYDTNKDGLLNENEILSWI------------VPSNEDIAEEEVNHLFAA 374
V EK ++ N YD NKDG +N+ E++ + ED + V+ F
Sbjct: 122 TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQK 181
Query: 375 SDDDHDDLLSFDEIVE 390
D + D +++ DE +E
Sbjct: 182 MDKNKDGIVTLDEFLE 197
Score = 41.1 bits (96), Expect = 3e-04
Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 16/157 (10%)
Query: 175 DLNKDNNIDRKELQAWILRSFRMLSVEESNSR--FEDADENTDGVVDWDEHLKETYGTED 232
L N ++ELQ R F+ + F+ D + + D
Sbjct: 41 QLEAQTNFTKRELQVLY-RGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFD 99
Query: 233 ADDIDVTNLGDDMNLLLLFTQMVKQDKM--IFNAADGDKNGVLDKTE-----------YQ 279
D + L + + +K+ FN D +K+G ++K E
Sbjct: 100 TTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMG 159
Query: 280 SFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
++ P + ++ D +KDG ++ EF+
Sbjct: 160 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFL 196
Score = 35.3 bits (81), Expect = 0.021
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 28/115 (24%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEK--------DTDKDGFLSF 312
+FNA D + G + ++ IL++ + EK D +KDG+++
Sbjct: 94 LFNAFDTTQTGSVKFEDF---------VTALSILLRGTVHEKLRWTFNLYDINKDGYINK 144
Query: 313 QEF----------MGDRGQKHNRQYIVEEK-DKFDNEYDTNKDGLLNENEILSWI 356
+E MG ++ + D F + D NKDG++ +E L
Sbjct: 145 EEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 199
Score = 35.3 bits (81), Expect = 0.022
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
+ L + ++ ++LR D+NKD I+++E+ + + M+
Sbjct: 112 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTP 171
Query: 207 -------FEDADENTDGVVDWDE 222
F+ D+N DG+V DE
Sbjct: 172 RQHVDVFFQKMDKNKDGIVTLDE 194
Score = 34.6 bits (79), Expect = 0.042
Identities = 13/89 (14%), Positives = 33/89 (37%)
Query: 302 KDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNE 361
K+ G ++ + F Q N +DT + G + + ++ +
Sbjct: 61 KNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR 120
Query: 362 DIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
E++ F D + D ++ +E+++
Sbjct: 121 GTVHEKLRWTFNLYDINKDGYINKEEMMD 149
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 44.6 bits (106), Expect = 2e-05
Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 28/158 (17%)
Query: 167 LRLLLKNMDLNKDNNIDRKELQAWILRSFRM-LSVEESNSRFEDADENTDGVVDWDEHLK 225
L + +D + ++D E + L + L E+ D N G +D +E L+
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQ-GLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLR 97
Query: 226 ETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPE 285
V F D +GV+ + + +
Sbjct: 98 ALRPPMSQAREAVI-------------------AAAFAKLDRSGDGVVTVDDLRGVYSGR 138
Query: 286 EHPHMF------PILIKQVLEEKD-TDKDGFLSFQEFM 316
HP + ++++ L+ D ++KDG ++ EF
Sbjct: 139 AHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQ 176
Score = 43.1 bits (102), Expect = 5e-05
Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 13/117 (11%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
+ + + D D L EF + G ++ E + ++D N G L+ E
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQ----AEAEGVCRKWDRNGSGTLDLEE 94
Query: 352 ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEI------VEHHDVFVGSEATD 402
L + P E + FA D D +++ D++ H V G D
Sbjct: 95 FLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTED 151
Score = 32.7 bits (75), Expect = 0.12
Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 15/151 (9%)
Query: 153 AGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADE 212
GL +L + + + D N +D +E + + F D
Sbjct: 61 QGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDR 120
Query: 213 NTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGV 272
+ DGVV D+ L+ Y + +D L + + N +K+G
Sbjct: 121 SGDGVVTVDD-LRGVYSGRAHPKVRSGEWTEDEVL----------RRFLDNFDSSEKDGQ 169
Query: 273 LDKTE----YQSFSAPEEHPHMFPILIKQVL 299
+ E Y SA F ++
Sbjct: 170 VTLAEFQDYYSGVSASMNTDEEFVAMMTSAW 200
Score = 32.3 bits (74), Expect = 0.17
Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 20/106 (18%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAP------EEHPHMFPILIKQVLEEKDTDKDGFLSF 312
+ + D + +G LD E+ P E I + D DG ++
Sbjct: 76 EGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAV-------IAAAFAKLDRSGDGVVTV 128
Query: 313 QEFMGDRGQKHNRQYIV------EEKDKFDNEYDTN-KDGLLNENE 351
+ G + + + E +F + +D++ KDG + E
Sbjct: 129 DDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAE 174
Score = 27.3 bits (61), Expect = 8.6
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQA-------WILRSFRMLSVEESN 204
+ L+ M + + +D + D + +L+ +RS E
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLR 155
Query: 205 SRFEDADENT-DGVVDWDE 222
++ D + DG V E
Sbjct: 156 RFLDNFDSSEKDGQVTLAE 174
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 44.2 bits (105), Expect = 2e-05
Identities = 21/128 (16%), Positives = 52/128 (40%), Gaps = 19/128 (14%)
Query: 259 KMIFNAADGDKNGVLDKTE----YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQE 314
+F D + NG L E S + I ++L+ D + G +++ E
Sbjct: 42 NELFYKLDTNHNGSLSHREIYTVLASVGIKKWD-------INRILQALDINDRGNITYTE 94
Query: 315 F--MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLF 372
F R + ++ +K D ++DG +++++I+S + ++ + ++++ F
Sbjct: 95 FMAGCYRWKNIESTFLKAAFNKI----DKDEDGYISKSDIVS--LVHDKVLDNNDIDNFF 148
Query: 373 AASDDDHD 380
+
Sbjct: 149 LSVHSIKK 156
Score = 41.9 bits (99), Expect = 1e-04
Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 33/161 (20%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEH 223
K + L +D N + ++ +E+ +L S + + N + D N G + + E
Sbjct: 38 IKYINELFYKLDTNHNGSLSHREIYT-VLASV-GIKKWDINRILQALDINDRGNITYTEF 95
Query: 224 LKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSA 283
+ Y ++ + + K FN D D++G + K++ S
Sbjct: 96 MAGCYRWKNIESTFL--------------------KAAFNKIDKDEDGYISKSDIVSLVH 135
Query: 284 PEEHPHMFPILIKQVLEEKDTDKDGFL--------SFQEFM 316
+ + I + K G SFQEF
Sbjct: 136 DKVLDNND---IDNFFLSVHSIKKGIPREHIINKISFQEFK 173
Score = 36.9 bits (86), Expect = 0.005
Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 13/111 (11%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
I ++ + DT+ +G LS +E + G K + ++ D N G + E
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGIKK------WDINRILQALDINDRGNITYTE 94
Query: 352 ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATD 402
++ + F D D D +S +I + +
Sbjct: 95 FMAGCYRWKNI-ESTFLKAAFNKIDKDEDGYISKSDI---VSLVHDKVLDN 141
Score = 36.9 bits (86), Expect = 0.005
Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 42/153 (27%)
Query: 207 FEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAAD 266
F D N +G + E + + D+ I A D
Sbjct: 45 FYKLDTNHNGSLSHRE-IYTVLASVGIKKWDI--------------------NRILQALD 83
Query: 267 GDKNGVLDKTEYQSFSAP-----EEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MGD 318
+ G + TE+ + +K + D D+DG++S + + D
Sbjct: 84 INDRGNITYTEFMAGCYRWKNIESTF-------LKAAFNKIDKDEDGYISKSDIVSLVHD 136
Query: 319 RGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
+ + + D F + K G+ E+
Sbjct: 137 KVLDN------NDIDNFFLSVHSIKKGIPREHI 163
Score = 35.7 bits (83), Expect = 0.012
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 328 IVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
I + F + DTN +G L+ EI + + ++ I + ++N + A D + +++ E
Sbjct: 38 IKYINELFY-KLDTNHNGSLSHREIYTVL--ASVGIKKWDINRILQALDINDRGNITYTE 94
Score = 31.5 bits (72), Expect = 0.33
Identities = 8/72 (11%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 157 MQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDG 216
+ K + L+ +D ++D I + ++ + ++ + + ++ F G
Sbjct: 100 YRWKNIESTFLKAAFNKIDKDEDGYISKSDIVS-LVHDKVL-DNNDIDNFFLSVHSIKKG 157
Query: 217 VVDWDEHLKETY 228
+ K ++
Sbjct: 158 IPREHIINKISF 169
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 43.6 bits (103), Expect = 3e-05
Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 15/154 (9%)
Query: 247 LLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDK 306
+LL + + + + + + S PE + F I +V
Sbjct: 19 ILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSL--PELKANPFKERICRVFSTSP--A 74
Query: 307 DGFLSFQEFMGDRGQKHNRQYIVEEKDKFD-NEYDTNKDGLLNENEILSWI--------- 356
LSF++F+ + + K + +D + DG LN ++ +
Sbjct: 75 KDSLSFEDFLDLLSVFSDT-ATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED 133
Query: 357 VPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ ++ ++++ SD D D ++ E
Sbjct: 134 TRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 167
Score = 35.5 bits (82), Expect = 0.015
Identities = 27/165 (16%), Positives = 51/165 (30%), Gaps = 28/165 (16%)
Query: 175 DLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTE--- 231
+ + ++E+ R F E + + V +++ L
Sbjct: 7 EYQDLTFLTKQEILLAH-RRFC----ELLPQEQRSVESSLRAQVPFEQILSLPELKANPF 61
Query: 232 --------DADDIDVT-NLGDDMNLLLLFTQMVKQD---KMIFNAADGDKNGVLDKTE-- 277
+ + D ++LL +F+ D F D D +G L++ +
Sbjct: 62 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLS 121
Query: 278 ------YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
LI +LEE D D+DG ++ EF
Sbjct: 122 RLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQ 166
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 43.7 bits (103), Expect = 3e-05
Identities = 19/154 (12%), Positives = 50/154 (32%), Gaps = 15/154 (9%)
Query: 247 LLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDK 306
+LL + + + + + + S + +P +++ T
Sbjct: 50 ILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANP-----FKERICRVFSTSP 104
Query: 307 -DGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWI--------- 356
LSF++F+ + + +D + DG LN ++ +
Sbjct: 105 AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED 164
Query: 357 VPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ ++ ++++ SD D D ++ E
Sbjct: 165 TRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 198
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 43.8 bits (103), Expect = 3e-05
Identities = 26/138 (18%), Positives = 56/138 (40%), Gaps = 17/138 (12%)
Query: 268 DKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQY 327
G + + ++QS A + V D++ DG L F+E++
Sbjct: 46 CPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYV--IALHMTTAG 103
Query: 328 IVEEKDKFD-NEYDTNKDGLLNENEILS--------------WIVPSNEDIAEEEVNHLF 372
+K ++ + YD + +G +++NE+L ++P +E+ E+ ++
Sbjct: 104 KTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIW 163
Query: 373 AASDDDHDDLLSFDEIVE 390
+ DD L+ E +E
Sbjct: 164 KYFGKNDDDKLTEKEFIE 181
Score = 42.3 bits (99), Expect = 1e-04
Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 38/172 (22%)
Query: 162 LTKKRLRLLLKN-MDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-FEDADENTDGVVD 219
+++ L ++ + I +++ Q+ + F + F D N DG +D
Sbjct: 30 FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLD 89
Query: 220 WDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMI--FNAADGDKNGVLDKTE 277
+ E+ + L + T K+ F+ D D NG + K E
Sbjct: 90 FKEY---------------------VIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNE 128
Query: 278 --------YQSFSAPEEHPHMFPI-----LIKQVLEEKDTDKDGFLSFQEFM 316
++ + + +++ + + D L+ +EF+
Sbjct: 129 VLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFI 180
Score = 34.6 bits (79), Expect = 0.038
Identities = 17/116 (14%), Positives = 39/116 (33%)
Query: 302 KDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNE 361
G ++ Q+F + +D+N DG L+ E + + +
Sbjct: 43 LKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTA 102
Query: 362 DIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATDFGDHLTNPHLIKEEL 417
+++ F+ D D + +S +E++E + L + E+
Sbjct: 103 GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKR 158
Score = 32.6 bits (74), Expect = 0.14
Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 14/85 (16%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----- 206
+ L M T ++L D++ + I + E+ ++ F+M++ E+
Sbjct: 94 VIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDEN 153
Query: 207 ---------FEDADENTDGVVDWDE 222
++ +N D + E
Sbjct: 154 TPEKRAEKIWKYFGKNDDDKLTEKE 178
Score = 30.7 bits (69), Expect = 0.63
Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 5/112 (4%)
Query: 170 LLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYG 229
+ ++ D N D +D KE + + + ++ F D + +G + +E L+
Sbjct: 76 VFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA 135
Query: 230 TEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSF 281
+ D L K+ + I+ + + L + E+
Sbjct: 136 I-----FKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEG 182
Score = 30.3 bits (68), Expect = 0.73
Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 31/126 (24%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEK--------DTDKDGFLSF 312
+F + D + +G LD +E+ + +K D D +G +S
Sbjct: 76 VFRSFDSNLDGTLDF---------KEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISK 126
Query: 313 QEFM------------GDRGQKHNRQYIVEEK-DKFDNEYDTNKDGLLNENEILSWIVPS 359
E + D + + E++ +K + N D L E E + + +
Sbjct: 127 NEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL-A 185
Query: 360 NEDIAE 365
N++I
Sbjct: 186 NKEILR 191
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 43.3 bits (102), Expect = 4e-05
Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 21/139 (15%)
Query: 268 DKNGVLDKTEYQSFSA---PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHN 324
+G L + ++ P P F + D D +GF+ F+EF+
Sbjct: 38 CPSGQLAREDFVKIYKQFFPFGSPEDF---ANHLFTVFDKDNNGFIHFEEFI--TVLSTT 92
Query: 325 RQYIVEEK-DKFDNEYDTNKDGLLNENEILSWI------------VPSNEDIAEEEVNHL 371
+ +EEK YD N DG + +E+L+ + + +E E V +
Sbjct: 93 SRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKI 152
Query: 372 FAASDDDHDDLLSFDEIVE 390
F D + D ++ DE E
Sbjct: 153 FKLMDKNEDGYITLDEFRE 171
Score = 42.1 bits (99), Expect = 1e-04
Identities = 23/168 (13%), Positives = 52/168 (30%), Gaps = 32/168 (19%)
Query: 162 LTKKRLRLLLKN-MDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-FEDADENTDGVVD 219
++ ++ K + + R++ + F S E+ + F D++ +G
Sbjct: 22 FDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGF-- 79
Query: 220 WDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTE-- 277
I ++ T K F D + +G + E
Sbjct: 80 ----------------IHFEEFITVLSTTSRGTLEEKLSWA-FELYDLNHDGYITFDEML 122
Query: 278 ---------YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
S E + +K++ + D ++DG+++ EF
Sbjct: 123 TIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 36.0 bits (83), Expect = 0.010
Identities = 16/89 (17%), Positives = 40/89 (44%)
Query: 302 KDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNE 361
G L+ ++F+ Q + + +D + +G ++ E ++ + ++
Sbjct: 35 LRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSR 94
Query: 362 DIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
EE+++ F D +HD ++FDE++
Sbjct: 95 GTLEEKLSWAFELYDLNHDGYITFDEMLT 123
Score = 33.7 bits (77), Expect = 0.065
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 12/86 (13%)
Query: 149 RNPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR-- 206
I L + +++L + DLN D I E+ + ++M+ + +
Sbjct: 83 EEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE 142
Query: 207 ----------FEDADENTDGVVDWDE 222
F+ D+N DG + DE
Sbjct: 143 ATPEMRVKKIFKLMDKNEDGYITLDE 168
Score = 33.3 bits (76), Expect = 0.091
Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 29/126 (23%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEK--------DTDKDGFL 310
+F D D NG + E+ + + + LEEK D + DG++
Sbjct: 66 NHLFTVFDKDNNGFIHFEEFIT---------VLSTTSRGTLEEKLSWAFELYDLNHDGYI 116
Query: 311 SFQEF----------MGDRGQKHNRQYIVEEK-DKFDNEYDTNKDGLLNENEILSWIVPS 359
+F E MG + + E + K D N+DG + +E
Sbjct: 117 TFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK-V 175
Query: 360 NEDIAE 365
+ I
Sbjct: 176 DPSIIG 181
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 43.5 bits (102), Expect = 5e-05
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 21/139 (15%)
Query: 268 DKNGVLDKTEYQSFSA---PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHN 324
G++D+ ++ + P+ + + D D +G + F++F+ G
Sbjct: 104 CPTGLVDEDTFKLIYSQFFPQGDATTY---AHFLFNAFDADGNGAIHFEDFV--VGLSIL 158
Query: 325 RQYIVEEK-DKFDNEYDTNKDGLLNENEILSWI------------VPSNEDIAEEEVNHL 371
+ V EK N YD NKDG + + E+L+ + ED E V
Sbjct: 159 LRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERF 218
Query: 372 FAASDDDHDDLLSFDEIVE 390
F D + D +++ DE +E
Sbjct: 219 FQKMDRNQDGVVTIDEFLE 237
Score = 43.1 bits (101), Expect = 7e-05
Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 17/171 (9%)
Query: 162 LTKKRLRLLLKNMD-LNKDNNIDRKELQAWILRSFRMLSVEESNSR--FEDADENTDGVV 218
L +R + +D L +KELQ+ R F+ F+
Sbjct: 67 LELSTVRHQPEGLDQLQAQTKFTKKELQSLY-RGFKNECPTGLVDEDTFKLIYSQFFPQG 125
Query: 219 DWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDK--MIFNAADGDKNGVLDKT 276
D + + DAD + D + L + + +K FN D +K+G + K
Sbjct: 126 DATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKE 185
Query: 277 EYQSF-----------SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
E + + P +++ ++ D ++DG ++ EF+
Sbjct: 186 EMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFL 236
Score = 37.3 bits (86), Expect = 0.006
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 29/124 (23%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEK--------DTDKDGFLSF 312
+FNA D D NG + ++ IL++ + EK D +KDG ++
Sbjct: 134 LFNAFDADGNGAIHFEDF---------VVGLSILLRGTVHEKLKWAFNLYDINKDGCITK 184
Query: 313 QEF----------MGDRGQKHNRQYIVEEK-DKFDNEYDTNKDGLLNENEILSWIVPSNE 361
+E MG R+ E ++F + D N+DG++ +E L +E
Sbjct: 185 EEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ-KDE 243
Query: 362 DIAE 365
+I
Sbjct: 244 NIMN 247
Score = 35.8 bits (82), Expect = 0.016
Identities = 12/89 (13%), Positives = 31/89 (34%)
Query: 302 KDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNE 361
K+ G + F Q + N +D + +G ++ + + +
Sbjct: 101 KNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLR 160
Query: 362 DIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
E++ F D + D ++ +E++
Sbjct: 161 GTVHEKLKWAFNLYDINKDGCITKEEMLA 189
Score = 30.8 bits (69), Expect = 0.68
Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 7/108 (6%)
Query: 174 MDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTEDA 233
D + + I ++ + R E+ F D N DG + +E
Sbjct: 138 FDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEE-------MLAI 190
Query: 234 DDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSF 281
+G +L ++ + F D +++GV+ E+
Sbjct: 191 MKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLET 238
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 42.4 bits (100), Expect = 8e-05
Identities = 22/182 (12%), Positives = 52/182 (28%), Gaps = 36/182 (19%)
Query: 155 LKMQMKILT---KKRLRLLLKNMDLNKDNNIDRKELQAW----ILRSF-RMLSVEESNSR 206
+K++ KR + + +D+N + I E+ + I + +
Sbjct: 7 VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQV 66
Query: 207 FEDADENTDGV-----VDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMI 261
+A G+ + + + L ++ + +
Sbjct: 67 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWG--------DAV 118
Query: 262 FNAADGDKNGVLDKTEYQSFSA-------PEEHPHMFPILIKQVLEEKDTDKDGFLSFQE 314
F+ D D +G + E++++ E+ + D D G L E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQED--------CEATFRHCDLDNAGDLDVDE 170
Query: 315 FM 316
Sbjct: 171 MT 172
Score = 35.9 bits (83), Expect = 0.012
Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 19/154 (12%)
Query: 253 QMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEE----HPHMFPILIKQVLEEKDTDKDG 308
+ +K+ K +F+ D + NG + E S ++ + QV E G
Sbjct: 17 RWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCG 76
Query: 309 F-----LSFQEF---MGDRGQKHNRQYIVEEKDKFDNE-------YDTNKDGLLNENEIL 353
++F +F +++ E +D + G + +E
Sbjct: 77 MEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 354 SWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
++ S ++E+ F D D+ L DE
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 39.5 bits (93), Expect = 8e-05
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 337 NEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
E D N DG ++ E+ +++ E+ + +F + D D + + +E +
Sbjct: 7 KEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ +F D + +G + E ++F + ++ L++ + + D D +G + EF
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVS-KKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Score = 37.9 bits (89), Expect = 3e-04
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 167 LRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE 222
L K +D+N D + +E++A++ + + + + F+ D + +G +D +E
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNE 57
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 294 LIKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNEN 350
+ + + +E D + DG +S++E + + N + D + +G +++N
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNE----QLLQLIFKSIDADGNGEIDQN 56
Query: 351 EILSWI 356
E +
Sbjct: 57 EFAKFY 62
Score = 32.1 bits (74), Expect = 0.028
Identities = 9/40 (22%), Positives = 21/40 (52%)
Query: 152 IAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWI 191
A + + I ++ L+L+ K++D + + ID+ E +
Sbjct: 23 KAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Score = 26.8 bits (60), Expect = 3.2
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 19/75 (25%)
Query: 207 FEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAAD 266
F++ D N DG V ++E +K V+ N + ++IF + D
Sbjct: 6 FKEIDVNGDGAVSYEE-VKAF----------VSKKRAIKN--------EQLLQLIFKSID 46
Query: 267 GDKNGVLDKTEYQSF 281
D NG +D+ E+ F
Sbjct: 47 ADGNGEIDQNEFAKF 61
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 39.6 bits (93), Expect = 1e-04
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 13/69 (18%)
Query: 253 QMVKQDKMIFNAADGDKNGVLDKTEYQSFSA-----PEEHPHMFPILIKQVLEEKDTDKD 307
+ + + + +F A D +++G L++ E+++ P + + V + D D+D
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPAD--------AEAVFQRLDADRD 75
Query: 308 GFLSFQEFM 316
G ++FQEF
Sbjct: 76 GAITFQEFA 84
Score = 35.4 bits (82), Expect = 0.005
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE 222
RLR + D N+ ++R+E +A + R + ++ + F+ D + DG + + E
Sbjct: 26 LARLRSVFAACDANRSGRLEREEFRA-LCTELR-VRPADAEAVFQRLDADRDGAITFQE 82
Score = 30.8 bits (70), Expect = 0.18
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 311 SFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNH 370
S +E + +G + + + + F D N+ G L E + + + + +
Sbjct: 9 SGRENLYFQGADGDGEELARLRSVFA-ACDANRSGRLEREEFRA--LCTELRVRPADAEA 65
Query: 371 LFAASDDDHDDLLSFDE 387
+F D D D ++F E
Sbjct: 66 VFQRLDADRDGAITFQE 82
Score = 27.7 bits (62), Expect = 1.8
Identities = 9/56 (16%), Positives = 19/56 (33%), Gaps = 9/56 (16%)
Query: 303 DTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSW 355
D ++ G L +EF + + + + D ++DG + E
Sbjct: 37 DANRSGRLEREEFRALCTELRVRP------ADAEAVFQRLDADRDGAITFQEFARG 86
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 41.6 bits (98), Expect = 1e-04
Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 16/139 (11%)
Query: 259 KMIFNAADGDKNGVLDKTEYQS------FSAPEEHPHMFPI-LIKQVLEEKDTDKDGFLS 311
+ +F GD + + TE + P+ F I + ++ D+D G L
Sbjct: 7 RRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLG 65
Query: 312 FQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHL 371
F+EF K+ I + + + +D ++ G + +E+ + + E + +
Sbjct: 66 FEEF------KYLWNNIKKWQAIYKQ-FDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMI 118
Query: 372 FAASDDDHDDLLSFDEIVE 390
D + FD +
Sbjct: 119 IRR-YSDEGGNMDFDNFIS 136
Score = 35.1 bits (81), Expect = 0.016
Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 38/161 (23%)
Query: 165 KRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFED---------ADENTD 215
++ R L + D + EL IL + F D +T
Sbjct: 4 RQFRRLFAQLA-GDDMEVSATELMN-ILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTT 61
Query: 216 GVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDK 275
G + ++E +K+ + I+ D D++G +
Sbjct: 62 GKLGFEE-------------------------FKYLWNNIKKWQAIYKQFDVDRSGTIGS 96
Query: 276 TEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+E A E + ++ + +D+ G + F F+
Sbjct: 97 SELPG--AFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFI 135
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A;
EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 40.2 bits (94), Expect = 1e-04
Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 156 KMQMKILTKK-RLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENT 214
++ + + + +N D K N I R+E +A R ++L+ E+ + + + N
Sbjct: 14 RLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNA 73
Query: 215 DGVVDWDE 222
G + + +
Sbjct: 74 KGRLKYPD 81
Score = 33.2 bits (76), Expect = 0.028
Identities = 9/67 (13%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Query: 321 QKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHD 380
K + +F +DT K ++ E + + + +E+ + L+ +
Sbjct: 16 HKAVTSHYHAITQEF-ENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAK 74
Query: 381 DLLSFDE 387
L + +
Sbjct: 75 GRLKYPD 81
Score = 32.8 bits (75), Expect = 0.041
Identities = 8/56 (14%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
F D K + + E+++ + ++ E + G L + +F+
Sbjct: 29 EFENFDTMKTNTISREEFRAICN-RRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 83
Score = 30.9 bits (70), Expect = 0.23
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
I Q E DT K +S +EF R Q E+ D+ NE N G L +
Sbjct: 26 ITQEFENFDTMKTNTISREEFRAICNRRVQILTD----EQFDRLWNEMPVNAKGRLKYPD 81
Query: 352 ILSWI 356
LS
Sbjct: 82 FLSRF 86
Score = 26.7 bits (59), Expect = 6.1
Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Query: 153 AGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADE 212
A +++ILT ++ L M +N + + S E + + D
Sbjct: 48 AICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDF-------LSRFSSETAATPMATGDS 100
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 41.0 bits (97), Expect = 2e-04
Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 32/158 (20%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE 222
L+ + +D +K I +EL+A L+ L E + AD + G +D+ E
Sbjct: 26 IAGLKEMFNMIDADKSGQITFEELKA-GLKRVGANLKESEILDLMQAADVDNSGTIDYKE 84
Query: 223 HLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQ--- 279
+ T + D +L FT F D D +G + E Q
Sbjct: 85 FIAATLHLNKIERED--------HLFAAFT--------YF---DKDGSGYITPDELQQAC 125
Query: 280 -SFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
F + I++++ + D D DG + + EF+
Sbjct: 126 EEFGVEDVR-------IEELMRDVDQDNDGRIDYNEFV 156
Score = 38.3 bits (90), Expect = 0.001
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 22/138 (15%)
Query: 259 KMIFNAADGDKNGVLDKTE----YQS--FSAPEEHPHMFPILIKQVLEEKDTDKDGFLSF 312
K +FN D DK+G + E + + E I +++ D D G + +
Sbjct: 30 KEMFNMIDADKSGQITFEELKAGLKRVGANLKESE-------ILDLMQAADVDNSGTIDY 82
Query: 313 QEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVN 369
+EF + ++ FD + G + +E+ + + +
Sbjct: 83 KEFIAATLHLNKIEREDHLFAAFTYFD----KDGSGYITPDELQQ--ACEEFGVEDVRIE 136
Query: 370 HLFAASDDDHDDLLSFDE 387
L D D+D + ++E
Sbjct: 137 ELMRDVDQDNDGRIDYNE 154
Score = 37.5 bits (88), Expect = 0.003
Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
+K++ D DK G ++F+E + G E D + G ++ E
Sbjct: 29 LKEMFNMIDADKSGQITFEELKAGLKRVGANLKE----SEILDLMQAADVDNSGTIDYKE 84
Query: 352 ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEI 388
++ + N+ E+ + F D D ++ DE+
Sbjct: 85 FIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDEL 121
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 41.4 bits (98), Expect = 2e-04
Identities = 33/196 (16%), Positives = 59/196 (30%), Gaps = 41/196 (20%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDEHLKETYGT 230
K +D + I EL+ L+ L E + AD + G +D+ E + T
Sbjct: 17 KMIDTDNSGTITFDELKD-GLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHL 75
Query: 231 EDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAP-----E 285
+ + NL F+ D D +G + E Q
Sbjct: 76 NKLEREE--------NL-----------VSAFSYFDKDGSGYITLDEIQQACKDFGLDDI 116
Query: 286 EHPHMFPILIKQVLEEKDTDKDGFLSFQEFM-----GDRGQKHNRQYIVEEKDKFD--NE 338
I +++E D D DG + + EF R+ + + + D
Sbjct: 117 H--------IDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGL 168
Query: 339 YDTNKDGLLNENEILS 354
D + ++
Sbjct: 169 VDNGSNQVIEGYFKHH 184
Score = 36.4 bits (85), Expect = 0.007
Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 26/143 (18%)
Query: 259 KMIFNAADGDKNGVLDKTEY--------QSFSAPEEHPHMFPILIKQVLEEKDTDKDGFL 310
K +F D D +G + E E IK +++ D DK G +
Sbjct: 13 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESE---------IKDLMDAADIDKSGTI 63
Query: 311 SFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEE 367
+ EF + + + F + +D + G + +EI + + +
Sbjct: 64 DYGEFIAATVHLNKLEREENL---VSAF-SYFDKDGSGYITLDEIQQ--ACKDFGLDDIH 117
Query: 368 VNHLFAASDDDHDDLLSFDEIVE 390
++ + D D+D + + E
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFAA 140
Score = 34.9 bits (81), Expect = 0.027
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
+K++ + DTD G ++F E + G + E + D +K G ++ E
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELME----SEIKDLMDAADIDKSGTIDYGE 67
Query: 352 ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEI 388
++ V N+ EE + F+ D D ++ DEI
Sbjct: 68 FIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEI 104
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 39.5 bits (93), Expect = 4e-04
Identities = 10/103 (9%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 294 LIKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFD--NEYDTNKDGLLN 348
+ + + L+ + + ++ + + +D +D G ++
Sbjct: 42 VQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVS 101
Query: 349 ENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEH 391
++ + E + + EV+ L + D + + + + +E
Sbjct: 102 VGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIED 144
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 38.1 bits (89), Expect = 6e-04
Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 330 EEKDKFD---NEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFD 386
EK K+D + D + DG ++ E+ + + + + H+++ D LS D
Sbjct: 7 AEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKD 64
Query: 387 EIV 389
+
Sbjct: 65 QFA 67
Score = 35.4 bits (82), Expect = 0.004
Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 11/59 (18%)
Query: 261 IFNAADGDKNGVLDKTEYQSF----SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
IF D D +G + E + P L+ + DT G LS +F
Sbjct: 15 IFLKTDKDMDGFVSGLEVREIFLKTGLPST-------LLAHIWSLCDTKDCGKLSKDQF 66
Score = 31.6 bits (72), Expect = 0.099
Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE 222
K + + D + D + E++ L++ L + D G + D+
Sbjct: 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKT--GLPSTLLAHIWSLCDTKDCGKLSKDQ 65
Score = 26.2 bits (58), Expect = 8.9
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 259 KMIFNAADGDKNGVLDKTEY 278
I++ D G L K ++
Sbjct: 47 AHIWSLCDTKDCGKLSKDQF 66
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 38.9 bits (91), Expect = 0.001
Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 13/130 (10%)
Query: 265 ADGDKNGVLDKTEYQSF---SAPEEHPHMFPI-LIKQVLEEKDTDKDGFLSFQEFMGDRG 320
A ++G +D E Q S F + + ++ D D G + F F
Sbjct: 8 AVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF----- 62
Query: 321 QKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHD 380
K + K+ F D + G + +E+ I ++ + + + +
Sbjct: 63 -KELWAALNAWKENFMT-VDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR 120
Query: 381 DLLSFDEIVE 390
+ FD+ V
Sbjct: 121 --IFFDDYVA 128
Score = 26.9 bits (60), Expect = 8.9
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 10/82 (12%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF--- 315
+++ D D G + ++ A K+ D D G + E
Sbjct: 43 RIMIAMLDRDHTGKMGFNAFKELWAALNA-------WKENFMTVDQDGSGTVEHHELRQA 95
Query: 316 MGDRGQKHNRQYIVEEKDKFDN 337
+G G + + Q + ++
Sbjct: 96 IGLMGYRLSPQTLTTIVKRYSK 117
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 38.2 bits (90), Expect = 0.001
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEIL 353
IK+++ E D + G ++F +F+ QK + + EE F +D ++ G ++ +
Sbjct: 44 IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAF-KLFDDDETGKISFKNLK 102
Query: 354 SWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
E++ +EE+ + +D D D +S E
Sbjct: 103 RVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 136
Score = 33.2 bits (77), Expect = 0.058
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 45/158 (28%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDEHLKETYGT 230
D + ID KEL+ +R+ EE + D+ G +++ + L
Sbjct: 13 DLFDADGTGTIDVKELKV-AMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT----- 66
Query: 231 EDADDIDVTNLGDDMNLLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTEYQSFSA-- 283
++ +M ++D F D D+ G + + +
Sbjct: 67 ------------------VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL 108
Query: 284 -----PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
EE ++++++E D D DG +S QEF+
Sbjct: 109 GENLTDEE--------LQEMIDEADRDGDGEVSEQEFL 138
Score = 28.6 bits (65), Expect = 1.8
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 303 DTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP- 358
D D G + +E M G + + EE K +E D G +N + L+ +
Sbjct: 16 DADGTGTIDVKELKVAMRALGFEPKK----EEIKKMISEIDKEGTGKMNFGDFLTVMTQK 71
Query: 359 SNEDIAEEEVNHLFAASDDDHDDLLSFDEI 388
+E +EE+ F DDD +SF +
Sbjct: 72 MSEKDTKEEILKAFKLFDDDETGKISFKNL 101
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 38.4 bits (89), Expect = 0.001
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 11/66 (16%)
Query: 262 FNAADGDKNGVLDKTE-------YQSFSAPEEHPHM----FPILIKQVLEEKDTDKDGFL 310
F D D N +LD E E+ P M +I VL + D + DG++
Sbjct: 74 FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 133
Query: 311 SFQEFM 316
+ EF
Sbjct: 134 DYAEFA 139
Score = 29.2 bits (65), Expect = 1.4
Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 11/63 (17%)
Query: 303 DTDKDGFLSFQEFM-----------GDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
D D + L E ++ + ++ D + D N DG ++ E
Sbjct: 78 DYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAE 137
Query: 352 ILS 354
Sbjct: 138 FAK 140
Score = 27.2 bits (60), Expect = 5.8
Identities = 14/120 (11%), Positives = 40/120 (33%), Gaps = 14/120 (11%)
Query: 283 APEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTN 342
E + + D++ + E + ++ + E + + +D +
Sbjct: 23 LEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQ--ELQLHYFKMHDYD 80
Query: 343 KDGLLNENEILSWIV------------PSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ LL+ E+ + I +ED ++ + D ++D + + E +
Sbjct: 81 GNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAK 140
Score = 27.2 bits (60), Expect = 6.9
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 12/65 (18%)
Query: 170 LLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR------------FEDADENTDGV 217
K D + +N +D EL I + E++ D D+N DG
Sbjct: 73 YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 132
Query: 218 VDWDE 222
+D+ E
Sbjct: 133 IDYAE 137
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 39.0 bits (91), Expect = 0.001
Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 14/136 (10%)
Query: 259 KMIFNAADGDKNGVLDKTEYQ---SFSAPEEHPHMFPI-LIKQVLEEKDTDKDGFLSFQE 314
F A ++G +D E Q + S F + + ++ D D G + F E
Sbjct: 36 YGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNE 94
Query: 315 FMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAA 374
F K + + F + +DT++ G ++ E+ + ++ + VN +
Sbjct: 95 F------KELWAVLNGWRQHFIS-FDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR 147
Query: 375 SDDDHDDLLSFDEIVE 390
+ ++FD+ +
Sbjct: 148 YSTNGK--ITFDDYIA 161
Score = 29.0 bits (65), Expect = 2.2
Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 47/158 (29%)
Query: 171 LKNMDLNKDNNIDRKELQAWILRS------FRMLSVEESNSRFEDADENTDGVVDWDEHL 224
+D ID ELQ L ++ ++E D + G + ++E
Sbjct: 38 YFAAVAGQDGQIDADELQR-CLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNE-- 94
Query: 225 KETYGTEDADDIDVTNLGDDMNLLLLFTQM---VKQDKMIFNAADGDKNGVLDKTEY-QS 280
F ++ + + F + D D++G +D E ++
Sbjct: 95 --------------------------FKELWAVLNGWRQHFISFDTDRSGTVDPQELQKA 128
Query: 281 FSAPEEH--PHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ P + K+ +G ++F +++
Sbjct: 129 LTTMGFRLSPQAVNSIAKRY------STNGKITFDDYI 160
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 38.3 bits (90), Expect = 0.001
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNEN 350
++++++E D D G + F EF M + ++ EE D F +D N DG ++
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLF-RMFDKNADGYIDLE 115
Query: 351 EILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
E+ + + E I E+++ L D ++D + +DE +E
Sbjct: 116 ELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
Score = 30.2 bits (69), Expect = 0.74
Identities = 27/154 (17%), Positives = 60/154 (38%), Gaps = 46/154 (29%)
Query: 178 KDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE-------HLKETYG 229
+D +I KEL ++R + + EE ++ DE+ G VD+DE +K+
Sbjct: 32 EDGSISTKELGK-VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 230 TEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSA------ 283
+ +++ +F D + +G +D E +
Sbjct: 91 GKSEEEL----------------------SDLFRMFDKNADGYIDLEELKIMLQATGETI 128
Query: 284 -PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
++ I++++++ D + DG + + EF+
Sbjct: 129 TEDD--------IEELMKDGDKNNDGRIDYDEFL 154
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 37.4 bits (87), Expect = 0.001
Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 330 EEKDKFD---NEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFD 386
+ K+ N +D G L + + ++ S+ + + ++ ++ SD D D L+ +
Sbjct: 11 SSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSS--LPQAQLASIWNLSDIDQDGKLTAE 68
Query: 387 EIV 389
E +
Sbjct: 69 EFI 71
Score = 35.9 bits (83), Expect = 0.004
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
+FN+ D +G L + ++ P + + D D+DG L+ +EF
Sbjct: 19 LFNSHDKTMSGHLTGPQARTILMQSSLPQA---QLASIWNLSDIDQDGKLTAEEF 70
Score = 30.1 bits (68), Expect = 0.40
Identities = 10/59 (16%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 164 KKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE 222
+ + R L + D ++ + + +++S L + S + +D + DG + +E
Sbjct: 13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQS--SLPQAQLASIWNLSDIDQDGKLTAEE 69
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 38.3 bits (90), Expect = 0.001
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEIL 353
++ ++ E D D +G + F EF+ +K EE ++ F +D + +G ++ E+
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF-RVFDKDGNGYISAAELR 107
Query: 354 SWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+ E + +EEV+ + +D D D ++++E
Sbjct: 108 HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Score = 33.7 bits (78), Expect = 0.060
Identities = 35/191 (18%), Positives = 62/191 (32%), Gaps = 50/191 (26%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDEHLKETYGT 230
D + D I KEL ++RS + + E + D + +G +D+ E L
Sbjct: 18 SLFDKDGDGTITTKELGT-VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT----- 71
Query: 231 EDADDIDVTNLGDDMNLLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTEYQSFSA-- 283
++ +M D + F D D NG + E +
Sbjct: 72 ------------------MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 113
Query: 284 -----PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEE-KDK 334
EE + +++ E D D DG ++++EF M +G E ++K
Sbjct: 114 GEKLTDEE--------VDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNK 165
Query: 335 FDNEYDTNKDG 345
Sbjct: 166 I-RAIGKMARV 175
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 38.3 bits (90), Expect = 0.001
Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 296 KQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEILS 354
+ L+ + G ++F F+ G+K + F D + G + ++ +
Sbjct: 61 NEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAF-KVLDPDGKGSIKKSFLEE 119
Query: 355 WIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIV 389
+ EE+ +++AA D + + I
Sbjct: 120 LLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNIC 154
Score = 27.9 bits (63), Expect = 4.5
Identities = 4/22 (18%), Positives = 8/22 (36%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
IK + D G + ++
Sbjct: 133 IKNMWAAFPPDVAGNVDYKNIC 154
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 37.9 bits (89), Expect = 0.002
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNEN 350
+ ++EE D D G + F+EF M + ++ + EE + F +D N DG ++
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCF-RIFDKNADGFIDIE 116
Query: 351 EILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
E+ + + E + EE++ L SD ++D + FDE ++
Sbjct: 117 ELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Score = 37.2 bits (87), Expect = 0.003
Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 46/160 (28%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE-------H 223
D + +I KEL ++R + + EE ++ E+ DE+ G +D++E
Sbjct: 27 DMFDADGGGDISTKELGT-VMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 224 LKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSA 283
+KE + +++ F D + +G +D E
Sbjct: 86 MKEDAKGKSEEEL----------------------ANCFRIFDKNADGFIDIEELGEILR 123
Query: 284 -------PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
E+ I+ ++++ D + DG + F EF+
Sbjct: 124 ATGEHVTEED--------IEDLMKDSDKNNDGRIDFDEFL 155
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 36.9 bits (86), Expect = 0.002
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Query: 302 KDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE---ILSWIVP 358
+D S ++F G +++ + K+ F D ++ G + E+E L
Sbjct: 16 RDCQAPDSFSPKKFFQISG--MSKKSSSQLKEIFRI-LDNDQSGFIEEDELKYFLQRFES 72
Query: 359 SNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+ E AA+D D D + +E
Sbjct: 73 GARVLTASETKTFLAAADHDGDGKIGAEE 101
Score = 35.3 bits (82), Expect = 0.007
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 156 KMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF----RMLSVEESNSRFEDAD 211
M + +L+ + + +D ++ I+ EL+ L+ F R+L+ E+ + AD
Sbjct: 32 ISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKY-FLQRFESGARVLTASETKTFLAAAD 90
Query: 212 ENTDGVVDWDE 222
+ DG + +E
Sbjct: 91 HDGDGKIGAEE 101
Score = 31.5 bits (72), Expect = 0.15
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSF--SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
K IF D D++G +++ E + F + K L D D DG + +EF
Sbjct: 44 KEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEF 102
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 37.5 bits (88), Expect = 0.002
Identities = 17/101 (16%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEE--KDKFDNEYDTNKDGLLNE 349
I+Q+++E D +G + F F + +++ ++ F YD +G ++
Sbjct: 52 IRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAF-RLYDKEGNGYIST 110
Query: 350 NEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ + + +E ++ E+++ + D D + F+E +
Sbjct: 111 DVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 151
Score = 33.7 bits (78), Expect = 0.042
Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 35/150 (23%)
Query: 177 NKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE--HLKETYGTEDA 233
+ ++ IL + ++ D +G +D+D + + E+
Sbjct: 26 EGSGRVSTDQIGI-ILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV 84
Query: 234 DDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSA-------PEE 286
+ M ++ + F D + NG + + A E+
Sbjct: 85 NPEQ----------------MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSED 128
Query: 287 HPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ +++E D D G + F+EFM
Sbjct: 129 --------LDAMIDEIDADGSGTVDFEEFM 150
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 37.5 bits (88), Expect = 0.002
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEIL 353
++ ++ E D D +G + F EF+ +K Q EE + F +D + +GL++ E+
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAF-KVFDRDGNGLISAAELR 106
Query: 354 SWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEH 391
+ E + ++EV+ + +D D D ++++E V
Sbjct: 107 HVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
Score = 30.1 bits (69), Expect = 0.57
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 45/156 (28%)
Query: 174 MDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTED 232
D + D I KEL ++RS + + E + D + +G +D+ E L
Sbjct: 19 FDKDGDGTITTKELGT-VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS------- 70
Query: 233 ADDIDVTNLGDDMNLLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTEYQSFSA---- 283
L+ +M +QD F D D NG++ E +
Sbjct: 71 ----------------LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 284 ---PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+E + +++ E D D DG ++++EF+
Sbjct: 115 KLTDDE--------VDEMIREADIDGDGHINYEEFV 142
Score = 27.1 bits (61), Expect = 7.5
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 303 DTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPS 359
D D DG ++ +E M GQ E NE D + +G ++ E LS +
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTE----AELQDMINEVDADGNGTIDFPEFLSLMARK 75
Query: 360 NEDI-AEEEVNHLFAASDDDHDDLLSFDEI 388
++ +EEE+ F D D + L+S E+
Sbjct: 76 MKEQDSEEELIEAFKVFDRDGNGLISAAEL 105
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 37.5 bits (88), Expect = 0.002
Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 22/149 (14%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDEHLK---ET 227
+ D +KD I+ ++L +R+ M + E + + N G VD+D+ ++
Sbjct: 18 REFDKDKDGYINCRDLGN-CMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPK 76
Query: 228 YGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEH 287
E AD I V L + F D + +G + +E +
Sbjct: 77 LLAETADMIGVKEL-----------------RDAFREFDTNGDGEISTSELREAMRALLG 119
Query: 288 PHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ I++++ + D + DG + F+EF+
Sbjct: 120 HQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 37.1 bits (87), Expect = 0.003
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEE--KDKFDNEYDTNKDGLLNE 349
+ ++ ++ + + G + F +F MG + I + +D F E+DTN DG ++
Sbjct: 49 LIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAF-REFDTNGDGEIST 107
Query: 350 NEILSWIVPSN--EDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+E L + + + ++ + D + D + F+E V
Sbjct: 108 SE-LREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 149
Score = 28.3 bits (64), Expect = 3.0
Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
+++ E D DKDG+++ ++ M G E + + + N G ++ ++
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTE----MELIELSQQINMNLGGHVDFDD 68
Query: 352 ILSWIVP-----SNEDIAEEEVNHLFAASDDDHDDLLSFDEI 388
+ + P + + I +E+ F D + D +S E+
Sbjct: 69 FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 110
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A
1rk9_A 1g33_A
Length = 109
Score = 36.5 bits (85), Expect = 0.002
Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 302 KDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE---ILSWIVP 358
++F G K + K F D +K G + E+E IL
Sbjct: 16 GAFTAADSFDHKKFFQMVGLKKKS--ADDVKKVFHI-LDKDKSGFIEEDELGSILKGFSS 72
Query: 359 SNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
D++ +E L AA D D D + +E
Sbjct: 73 DARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Score = 36.1 bits (84), Expect = 0.003
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 156 KMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF----RMLSVEESNSRFEDAD 211
+ +K + ++ + +D +K I+ EL + IL+ F R LS +E+ + D
Sbjct: 32 MVGLKKKSADDVKKVFHILDKDKSGFIEEDELGS-ILKGFSSDARDLSAKETKTLMAAGD 90
Query: 212 ENTDGVVDWDE 222
++ DG + +E
Sbjct: 91 KDGDGKIGVEE 101
Score = 30.7 bits (70), Expect = 0.27
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 259 KMIFNAADGDKNGVLDKTE----YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQE 314
K +F+ D DK+G +++ E + FS+ + K ++ D D DG + +E
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARD--LSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 315 FM 316
F
Sbjct: 102 FS 103
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 37.5 bits (88), Expect = 0.003
Identities = 18/94 (19%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEIL 353
I +++E D++ + + +F G+K ++ ++E K F +D + G ++ +
Sbjct: 61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAF-QLFDDDHTGKISIKNLR 119
Query: 354 SWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
E + +EE+ + D D D ++ +E
Sbjct: 120 RVAKELGETLTDEELRAMIEEFDLDGDGEINENE 153
Score = 33.7 bits (78), Expect = 0.053
Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 45/158 (28%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDEHLKETYGT 230
D+N D +D EL+ +++ L E ++ D ++ +D+
Sbjct: 30 SLFDMNNDGFLDYHELKV-AMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYI----- 83
Query: 231 EDADDIDVTNLGDDMNLLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTEYQSFSA-- 283
++ +++K+D K F D D G + + +
Sbjct: 84 ------------------VMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKEL 125
Query: 284 -----PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
EE ++ ++EE D D DG ++ EF+
Sbjct: 126 GETLTDEE--------LRAMIEEFDLDGDGEINENEFI 155
Score = 30.2 bits (69), Expect = 0.70
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
I + D + DGFL + E M G + ++ I +EYD+ L+ ++
Sbjct: 25 IYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREI----LDLIDEYDSEGRHLMKYDD 80
Query: 352 ILSWIVP-SNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATDFGDHLTNP 410
+ + +E+ F DDDH +S + V A + G+ LT+
Sbjct: 81 FYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNL---RRV-----AKELGETLTDE 132
Query: 411 HL---IKE 415
L I+E
Sbjct: 133 ELRAMIEE 140
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 36.1 bits (83), Expect = 0.003
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 15/73 (20%)
Query: 259 KMIFNAADGDKNGVLDKTEYQ---------------SFSAPEEHPHMFPILIKQVLEEKD 303
K F D + +GVLD+ E + E + + V++ D
Sbjct: 23 KTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVD 82
Query: 304 TDKDGFLSFQEFM 316
T++D ++ +EF+
Sbjct: 83 TNQDRLVTLEEFL 95
Score = 28.8 bits (64), Expect = 1.1
Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 16/72 (22%)
Query: 335 FDNEYDTNKDGLLNENEILS----------------WIVPSNEDIAEEEVNHLFAASDDD 378
F +D N DG+L+E E+ + + E+ H+ D +
Sbjct: 25 FFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTN 84
Query: 379 HDDLLSFDEIVE 390
D L++ +E +
Sbjct: 85 QDRLVTLEEFLA 96
Score = 28.8 bits (64), Expect = 1.1
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 16/77 (20%)
Query: 167 LRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----------------FEDA 210
+ D+N D +D +EL+A + + ++ ++
Sbjct: 22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNV 81
Query: 211 DENTDGVVDWDEHLKET 227
D N D +V +E L T
Sbjct: 82 DTNQDRLVTLEEFLAST 98
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding,
ME binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 37.2 bits (87), Expect = 0.003
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEIL 353
IK+++ E D D G + F+EF+ K + EE F +D + G + ++
Sbjct: 66 IKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAF-RLFDDDNSGTITIKDLR 124
Query: 354 SWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
E++ EEE+ + A +D + D+ + DE
Sbjct: 125 RVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 158
Score = 33.7 bits (78), Expect = 0.049
Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 45/158 (28%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDEHLKETYGT 230
D + ID KEL+ +R+ EE + D++ G +D++E L
Sbjct: 35 DLFDTDGSGTIDAKELKV-AMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT----- 88
Query: 231 EDADDIDVTNLGDDMNLLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTEYQSFSA-- 283
++ +M ++D F D D +G + + + +
Sbjct: 89 ------------------MMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKEL 130
Query: 284 -----PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
EE +++++ E D + D + EF+
Sbjct: 131 GENLTEEE--------LQEMIAEADRNDDNEIDEDEFI 160
Score = 29.1 bits (66), Expect = 1.5
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 303 DTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPS 359
DTD G + +E M G + + EE K +E D + G ++ E L+ +
Sbjct: 38 DTDGSGTIDAKELKVAMRALGFEPKK----EEIKKMISEIDKDGSGTIDFEEFLTMMTAK 93
Query: 360 -NEDIAEEEVNHLFAASDDDHDDLLSFDEI 388
E + EE+ F DDD+ ++ ++
Sbjct: 94 MGERDSREEILKAFRLFDDDNSGTITIKDL 123
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 36.1 bits (84), Expect = 0.003
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 156 KMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF----RMLSVEESNSRFEDAD 211
+ ++ +++ + + +D ++ +D EL+ L+ F R L+ E+ S + AD
Sbjct: 32 TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKY-FLQKFQSDARELTESETKSLMDAAD 90
Query: 212 ENTDGVVDWDE 222
+ DG + DE
Sbjct: 91 NDGDGKIGADE 101
Score = 34.6 bits (80), Expect = 0.012
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 302 KDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE---ILSWIVP 358
++ Q+F G + KD F D ++ G L+ +E L
Sbjct: 16 QECQDPDTFEPQKFFQTSGLSKMS--ASQVKDIFRF-IDNDQSGYLDGDELKYFLQKFQS 72
Query: 359 SNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
++ E E L A+D+D D + DE
Sbjct: 73 DARELTESETKSLMDAADNDGDGKIGADE 101
Score = 31.9 bits (73), Expect = 0.11
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 259 KMIFNAADGDKNGVLDKTE----YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQE 314
K IF D D++G LD E Q F + + K +++ D D DG + E
Sbjct: 44 KDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE--LTESETKSLMDAADNDGDGKIGADE 101
Query: 315 FM 316
F
Sbjct: 102 FQ 103
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 36.7 bits (86), Expect = 0.003
Identities = 22/149 (14%), Positives = 49/149 (32%), Gaps = 21/149 (14%)
Query: 252 TQMVKQDKMIFNAADGDKNGVLDKTEY--------QSFSAPEEHPHMFPILIKQVLEEKD 303
T Q + F D D +G + E ++ + E + + + +
Sbjct: 1 TASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAE---------LNTIKGQLN 51
Query: 304 TDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEILSWIVPSNED 362
+ +F+ + Q +E D F D +G + E E+ ++ +
Sbjct: 52 AKEFDLATFKTVYRKPIKTPTEQS--KEMLDAF-RALDKEGNGTIQEAELRQLLLNLGDA 108
Query: 363 IAEEEVNHLFAASDDDHDDLLSFDEIVEH 391
+ EV L D ++++ V+
Sbjct: 109 LTSSEVEELMKEVSVSGDGAINYESFVDM 137
Score = 27.9 bits (63), Expect = 4.0
Identities = 10/73 (13%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 151 PIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRM-LSVEESNSRFED 209
+ ++ K + + +D + I EL+ +L + L+ E ++
Sbjct: 62 TVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQ-LLLNLGDALTSSEVEELMKE 120
Query: 210 ADENTDGVVDWDE 222
+ DG ++++
Sbjct: 121 VSVSGDGAINYES 133
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 35.5 bits (82), Expect = 0.004
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
F+ GDK G L K + + E + P+ + +++++ D +DG + FQ F
Sbjct: 14 TFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFF 72
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 38.3 bits (89), Expect = 0.004
Identities = 42/243 (17%), Positives = 86/243 (35%), Gaps = 45/243 (18%)
Query: 155 LKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENT 214
K M + + K+ N R E++ +
Sbjct: 241 FKSAMPEGYIQERTIFFKDDG----NYKTRAEVKFEGD---------------TLVNRIE 281
Query: 215 DGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLD 274
+D+ E +I L + L Q+ + K F+ D D +G +
Sbjct: 282 LKGIDFKEDG----------NILGHKLEYNTRDQLTEEQI-AEFKEAFSLFDKDGDGTIT 330
Query: 275 KTEYQS------FSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYI 328
E + + E ++ ++ E D D +G + F EF+ +K
Sbjct: 331 TKELGTVMRSLGQNPTEAE-------LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383
Query: 329 VEE-KDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
EE ++ F +D + +G ++ E+ + E + +EEV+ + +D D D ++++E
Sbjct: 384 EEEIREAF-RVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 442
Query: 388 IVE 390
V+
Sbjct: 443 FVQ 445
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping,
EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB:
1h4b_A
Length = 86
Score = 35.3 bits (82), Expect = 0.004
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 167 LRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE 222
+ K D N D I EL L++ ++ +E + D + DG + +DE
Sbjct: 13 RERIFKRFDTNGDGKISSSELGD-ALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 67
Score = 30.3 bits (69), Expect = 0.21
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 253 QMVKQDKMIFNAADGDKNGVLDKTEYQSF------SAPEEHPHMFPILIKQVLEEKDTDK 306
Q + + IF D + +G + +E P+E +++++ E DTD
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDE--------VRRMMAEIDTDG 59
Query: 307 DGFLSFQEFM 316
DGF+SF EF
Sbjct: 60 DGFISFDEFT 69
Score = 26.8 bits (60), Expect = 3.8
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 328 IVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
I + + F +DTN DG ++ +E L + + + +EV + A D D D +SFDE
Sbjct: 10 IADRERIFK-RFDTNGDGKISSSE-LGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDE 67
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 36.6 bits (85), Expect = 0.005
Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 13/127 (10%)
Query: 268 DKNGVLDKTEYQ---SFSAPEEHPHMFPI-LIKQVLEEKDTDKDGFLSFQEFMGDRGQKH 323
++G +D E Q + S F + + ++ D D G + F EF K
Sbjct: 13 GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEF------KE 66
Query: 324 NRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLL 383
+ + F + +D+++ G ++ E+ + + + VN + +
Sbjct: 67 LWAVLNGWRQHFIS-FDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGK--I 123
Query: 384 SFDEIVE 390
+FD+ +
Sbjct: 124 TFDDYIA 130
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 35.6 bits (83), Expect = 0.005
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 15/104 (14%)
Query: 295 IKQVLEEKD-------TDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGL 346
+ +VL+ D G ++ F G K + K+ F D ++ G
Sbjct: 2 MTKVLKADDINKAISAFKDPGTFDYKRFFHLVGLKGKTD---AQVKEVF-EILDKDQSGF 57
Query: 347 LNENE---ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+ E E +L D+ + E L AA D DHD + DE
Sbjct: 58 IEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101
Score = 28.7 bits (65), Expect = 1.5
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
K +L D+D DG + EF
Sbjct: 82 TKALLAAGDSDHDGKIGADEFA 103
Score = 26.8 bits (60), Expect = 5.1
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 178 KDNN--IDRKELQAWILRSFRM----LSVEESNSRFEDADENTDGVVDWDE 222
KD + I+ +EL+ +L+ F L+ E+ + D + DG + DE
Sbjct: 52 KDQSGFIEEEELKG-VLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: a.39.1.5
Length = 67
Score = 34.4 bits (80), Expect = 0.006
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 167 LRLLLKNMDLNKDNNIDRKELQAWILRSFRM-LSVEESNSRFEDADENTDGVVDWDE 222
+ + + D NKD + E + + +F + E+ FE+ D + +G ++ DE
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFRE-VALAFSPYFTQEDIVKFFEEIDVDGNGELNADE 58
Score = 32.5 bits (75), Expect = 0.027
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 15/65 (23%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSA-------PEEHPHMFPILIKQVLEEKDTDKDGFLS 311
K +F D +K+G L E++ + E+ I + EE D D +G L+
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQED--------IVKFFEEIDVDGNGELN 55
Query: 312 FQEFM 316
EF
Sbjct: 56 ADEFT 60
Score = 31.3 bits (72), Expect = 0.059
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
K+V E+ D +KDG LS EF + E+ KF E D + +G LN +E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQ----EDIVKFFEEIDVDGNGELNADE 58
Score = 29.8 bits (68), Expect = 0.25
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 337 NEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
++D NKDG L+ +E + + +E++ F D D + L+ DE
Sbjct: 8 EKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADE 58
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis complex;
NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 34.7 bits (80), Expect = 0.006
Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 11/59 (18%)
Query: 261 IFNAADGDKNGVLDKTE----YQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
F D NG + + + P + + E D DKDG L+ EF
Sbjct: 14 QFKTIQPDLNGFIPGSAAKEFFTKSKLPIL-------ELSHIWELSDFDKDGALTLDEF 65
Score = 34.3 bits (79), Expect = 0.009
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 330 EEKDKFD---NEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFD 386
E++ + + +G + + + S + E++H++ SD D D L+ D
Sbjct: 6 EQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLD 63
Query: 387 E 387
E
Sbjct: 64 E 64
Score = 26.2 bits (58), Expect = 7.6
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 259 KMIFNAADGDKNGVLDKTEY 278
I+ +D DK+G L E+
Sbjct: 46 SHIWELSDFDKDGALTLDEF 65
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 35.1 bits (81), Expect = 0.007
Identities = 9/61 (14%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 330 EEKDKFD---NEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFD 386
E+++ + + ++ + ++ S ++ E+++++ SD D D L+
Sbjct: 19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLP 76
Query: 387 E 387
E
Sbjct: 77 E 77
Score = 33.6 bits (77), Expect = 0.026
Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 11/59 (18%)
Query: 261 IFNAADGDKNGVLDKTEYQSF----SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
F + D + + + ++F + + E D D DG L+ EF
Sbjct: 27 QFRSLQPDPSSFISGSVAKNFFTKSKLSIPE-------LSYIWELSDADCDGALTLPEF 78
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 34.9 bits (81), Expect = 0.008
Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 8/96 (8%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE--- 351
+ L+ + +++ F G + + K F D +K G + E+E
Sbjct: 12 VAAALK--ACEAADSFNYKAFFAKVG--LTAKSADDIKKAF-FVIDQDKSGFIEEDELKL 66
Query: 352 ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
L + + E A D D D + DE
Sbjct: 67 FLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDE 102
Score = 33.8 bits (78), Expect = 0.020
Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 231 EDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTE----YQSFSAPEE 286
+ + D N + L + K F D DK+G +++ E Q FSA
Sbjct: 17 KACEAADSFNYKAFFAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGAR 76
Query: 287 HPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
K L+ D+D DG + E+
Sbjct: 77 ALT--DAETKAFLKAGDSDGDGAIGVDEWA 104
Score = 31.1 bits (71), Expect = 0.22
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 156 KMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRM----LSVEESNSRFEDAD 211
K+ + + ++ +D +K I+ EL+ L+ F L+ E+ + + D
Sbjct: 33 KVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKL-FLQVFSAGARALTDAETKAFLKAGD 91
Query: 212 ENTDGVVDWDE 222
+ DG + DE
Sbjct: 92 SDGDGAIGVDE 102
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 34.9 bits (81), Expect = 0.009
Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 14/99 (14%)
Query: 295 IKQVLEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
IK+ L+ +G + ++F +G + N + K F D + G + E E
Sbjct: 12 IKKALDA--VKAEGSFNHKKFFALVGLKAMSAN-----DVKKVF-KAIDADASGFIEEEE 63
Query: 352 ---ILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+L D+ + E A+D D D + DE
Sbjct: 64 LKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 102
Score = 30.6 bits (70), Expect = 0.25
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 156 KMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF----RMLSVEESNSRFEDAD 211
+ +K ++ ++ + K +D + I+ +EL+ +L+SF R L+ E+ + + AD
Sbjct: 33 LVGLKAMSANDVKKVFKAIDADASGFIEEEELKF-VLKSFAADGRDLTDAETKAFLKAAD 91
Query: 212 ENTDGVVDWDE 222
++ DG + DE
Sbjct: 92 KDGDGKIGIDE 102
Score = 28.7 bits (65), Expect = 1.3
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
K L+ D D DG + EF
Sbjct: 83 TKAFLKAADKDGDGKIGIDEFE 104
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 34.1 bits (79), Expect = 0.009
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 175 DLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE 222
D N D I EL LR+ S +E + D + DG +D++E
Sbjct: 13 DTNGDGKISLSELTD-ALRTLGSTSADEVQRMMAEIDTDGDGFIDFNE 59
Score = 30.2 bits (69), Expect = 0.20
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSF------SAPEEHPHMFPILIKQVLEEKDTDKDGFLSF 312
+ IF D + +G + +E ++ +E +++++ E DTD DGF+ F
Sbjct: 6 ERIFKRFDTNGDGKISLSELTDALRTLGSTSADE--------VQRMMAEIDTDGDGFIDF 57
Query: 313 QEFM 316
EF+
Sbjct: 58 NEFI 61
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 35.0 bits (81), Expect = 0.012
Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILS 354
K +L E + +++ + +K + + V E K + + L+ L
Sbjct: 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAES-LR 63
Query: 355 WIVPS--NEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
E +++E+ + D D D L+ E
Sbjct: 64 RNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCV 101
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 34.0 bits (78), Expect = 0.013
Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
+ + G + + +F P +++ ++ + DTD G LS QEF
Sbjct: 16 YYRQVEAGNTGRVLALDAAAFLKKSGLP---DLILGKIWDLADTDGKGVLSKQEF 67
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 33.5 bits (77), Expect = 0.014
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMF--PILIKQVLEEKDTDKDGFLSFQEFM 316
+ A +GD L K E + E P + P + + +E D + DG +SF+EF
Sbjct: 16 YAAKEGDP-NQLSKEELKQL-IQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQ 70
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 36.8 bits (84), Expect = 0.015
Identities = 51/350 (14%), Positives = 108/350 (30%), Gaps = 91/350 (26%)
Query: 1 MFNKCLLLLS-----------------LFSTCINSAHIGSHLNKEREEDGSFVSRDHNHY 43
+ CLL+L L +T + L+ +S DH+
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCKILLTT--RFKQVTDFLSAATTTH---ISLDHHSM 296
Query: 44 GQGGEHNTDFDHEAILDRYNNIPQEDGSFVSRDHNHYGQGGEHNTDFDHEAILGELI--- 100
T + +++L +Y + +D N +I+ E I
Sbjct: 297 TL-----TPDEVKSLLLKYLDCRPQDLPREVLTTNPR-----------RLSIIAESIRDG 340
Query: 101 PATSKN-QRPSPERIGSVKEAEEFEHLTTTLTGKSFKHGSYALFE----------CYPWR 149
AT N + + +++ ++ E+ L K F ++F W
Sbjct: 341 LATWDNWKHVNCDKLTTIIES-SLNVLEPAEYRKMFD--RLSVFPPSAHIPTILLSLIWF 397
Query: 150 NPIAGLKMQMKILTK-KRLRLLLKN------------MDLNKDNNIDRKELQAWILRSFR 196
+ I M ++ K + L+ K ++L + L I+ +
Sbjct: 398 DVIK--SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE-NEYALHRSIVDHYN 454
Query: 197 MLSVEESNSRFEDADENTDGVVDW--DEHLKETYGTEDADDIDVTNLGDDMNLLLL---F 251
+ +S+ D HLK E + + + ++ L F
Sbjct: 455 IPKTFDSDDLIPPYL---DQYFYSHIGHHLKN---IEHPERMTL------FRMVFLDFRF 502
Query: 252 TQM-VKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLE 300
+ ++ D +NA+ N + Y+ + + P + L+ +L+
Sbjct: 503 LEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC-DNDPK-YERLVNAILD 550
Score = 34.1 bits (77), Expect = 0.094
Identities = 41/289 (14%), Positives = 78/289 (26%), Gaps = 89/289 (30%)
Query: 94 AILGELI---PATSKN-QRPSPERIGSVKEAEEFEHLTTTLTGKSFKHGSYALFE----- 144
+I+ E I AT N + + +++ ++ E+ L K F ++F
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESS-LNVLEPAEYRKMFD--RLSVFPPSAHI 387
Query: 145 -----CYPWRNPIAGLKMQMKILTK-KRLRLLLKN------------MDLNKDNNIDRKE 186
W + I M ++ K + L+ K ++L +
Sbjct: 388 PTILLSLIWFDVIK--SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE-NEYA 444
Query: 187 LQAWILRSFRMLSVEESNSRFEDADENTDGVVDW--DEHLKETYGTEDADDIDVTNLGDD 244
L I+ + + +S+ D HLK E
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYL---DQYFYSHIGHHLKNIEHPERMT---------- 491
Query: 245 MNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDT 304
LF + + F F ++Q + T
Sbjct: 492 -----LFRMV-----------------------FLDFR--------F---LEQKIRHDST 512
Query: 305 DKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEIL 353
+ S + K + YI + K++ + D L E L
Sbjct: 513 AWNASGSILNTLQQ--LKFYKPYICDNDPKYERLVNAILDFLPKIEENL 559
Score = 32.5 bits (73), Expect = 0.31
Identities = 33/231 (14%), Positives = 76/231 (32%), Gaps = 45/231 (19%)
Query: 207 FEDA-DENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMN-LLLLFTQMVKQDKMIFNA 264
FEDA +N D D + K E+ D I D ++ L LF ++ + + +
Sbjct: 25 FEDAFVDNFD-CKDVQDMPKSILSKEEIDHI--IMSKDAVSGTLRLFWTLLSKQEEMVQK 81
Query: 265 ADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHN 324
+ + + Y+ +P IK + ++ ++ + + Q
Sbjct: 82 FVEE----VLRINYKFLMSP----------IKTEQRQPSMMTRMYIEQRDRLYNDNQVF- 126
Query: 325 RQYIVEEKDKFDNEYDTNKDGL--LNENEIL----------SWIVPS---NEDIAEEEVN 369
+Y V + + L L + + +W+ + + +
Sbjct: 127 AKYNVSRLQPYLKL----RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182
Query: 370 HLF---AASDDDHDDLLSFDEIVEHHDVFVGSEATDFGDHLTNPHLIKEEL 417
+F + + + +L E+++ + T DH +N L +
Sbjct: 183 KIFWLNLKNCNSPETVL---EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Score = 31.4 bits (70), Expect = 0.65
Identities = 42/255 (16%), Positives = 71/255 (27%), Gaps = 88/255 (34%)
Query: 2 FNKCLLLLSLFSTCINSAHIGSHL------NKEREEDGSFVSRDHN--------HYGQGG 47
+ K LS+F SAHI + L + + + V++ H
Sbjct: 371 YRKMFDRLSVFP---PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427
Query: 48 EHNTDFD-----------HEAILDRYN----------NIPQEDGSFVSRDHNHYGQGGEH 86
+ + H +I+D YN P D F ++H G H
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF----YSHIG----H 479
Query: 87 NTDFDHEAILGELIPATSKNQRPSPERIGSVKEAEEFEHLTTTLTGKSF-----KHGSYA 141
H + +++ E F +H S A
Sbjct: 480 -----H---------------------LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513
Query: 142 LFECYPWRNPIAGLKMQMKILTKK------RLRLLLKNMDLNKDNNIDRKELQAWILRSF 195
N + LK + + +L + ++N I K +LR
Sbjct: 514 WNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD--LLRIA 571
Query: 196 RMLSVEESNSRFEDA 210
M E + FE+A
Sbjct: 572 LM---AEDEAIFEEA 583
Score = 30.6 bits (68), Expect = 1.1
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 25/104 (24%)
Query: 321 QKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHD 380
Q + + +D F + +D KD ILS +EE++H+ + D
Sbjct: 15 QYQYKDILSVFEDAFVDNFDC-KDVQDMPKSILS----------KEEIDHIIMSKDAVSG 63
Query: 381 DLLSFD-------EIVEHHDVFVGS-EATDFGDHLTNPHLIKEE 416
L F E+V+ FV ++ L +P IK E
Sbjct: 64 TLRLFWTLLSKQEEMVQ---KFVEEVLRINY-KFLMSP--IKTE 101
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 142
Score = 34.8 bits (81), Expect = 0.015
Identities = 12/94 (12%), Positives = 35/94 (37%), Gaps = 3/94 (3%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEIL 353
++ E D +G + F EF+ G++ + + + F +D G + + +
Sbjct: 44 FNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAF-RTFDPEGTGYIPKAALQ 102
Query: 354 SWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
++ + + E ++ + + +D
Sbjct: 103 DALLNLGDRLKPHEFAEFLGITETE-KGQIRYDN 135
Score = 28.2 bits (64), Expect = 2.3
Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 50/160 (31%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE-------H 223
+ D + I ++ LQ +L+ F + N F +AD +G + + E
Sbjct: 13 ELFDSERTGFITKEGLQT-VLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRR 71
Query: 224 LKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSA 283
+K+ T D + + F D + G + K Q
Sbjct: 72 MKQ---TTSEDIL----------------------RQAFRTFDPEGTGYIPKAALQDALL 106
Query: 284 -------PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
P E + L +T+ G + + F+
Sbjct: 107 NLGDRLKPHE--------FAEFLGITETE-KGQIRYDNFI 137
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 33.8 bits (78), Expect = 0.020
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSF--SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
K +F D DK+G +++ E Q F + + K L DTD DG + +EF
Sbjct: 45 KKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQ 104
Score = 33.8 bits (78), Expect = 0.024
Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 8/96 (8%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEI-- 352
I+ L +++ F G ++ K D +K G + E E+
Sbjct: 12 IESALS--SCQAADSFNYKSFFSTVGLSSKTP---DQIKKVFGILDQDKSGFIEEEELQL 66
Query: 353 -LSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
L S + E AA D D D + +E
Sbjct: 67 FLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 102
Score = 32.2 bits (74), Expect = 0.070
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 156 KMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSF----RMLSVEESNSRFEDAD 211
+ + T +++ + +D +K I+ +ELQ L++F R+L+ E+ + D
Sbjct: 33 TVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQL-FLKNFSSSARVLTSAETKAFLAAGD 91
Query: 212 ENTDGVVDWDE 222
+ DG + +E
Sbjct: 92 TDGDGKIGVEE 102
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 34.5 bits (79), Expect = 0.022
Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 4/97 (4%)
Query: 291 FPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNEN 350
F +L Q E + FL ++ D + + K K+ E+D N +G ++
Sbjct: 13 FGLLKAQQEERLEGINKQFLDDPKYSND---EDLPSKLEAFKVKY-MEFDLNGNGDIDIM 68
Query: 351 EILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+ + E+ L ++ S+ +
Sbjct: 69 SLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSD 105
Score = 31.8 bits (72), Expect = 0.19
Identities = 8/59 (13%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 165 KRLRLLLKNMDLNKDNNIDRKELQAWILRSFRM-LSVEESNSRFEDADENTDGVVDWDE 222
+ ++ DLN + +ID L+ +L + + E + ++ + +
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKR-MLEKLGVPKTHLELKRLIREVSSGSEETFSYSD 105
Score = 31.4 bits (71), Expect = 0.23
Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Query: 253 QMVKQDKMIFNAADGDKNGVLDKTEYQ----SFSAPEEHPHMFPILIKQVLEEKDTDKDG 308
++ K+ + D + NG +D + P+ H +K+++ E + +
Sbjct: 45 SKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLE-----LKRLIREVSSGSEE 99
Query: 309 FLSFQEFM 316
S+ +F+
Sbjct: 100 TFSYSDFL 107
Score = 29.1 bits (65), Expect = 1.5
Identities = 14/104 (13%), Positives = 29/104 (27%), Gaps = 11/104 (10%)
Query: 266 DGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF---MGDRGQK 322
+G LD +Y + F K E D + +G + + G
Sbjct: 25 EGINKQFLDDPKYSNDEDLPSKLEAF----KVKYMEFDLNGNGDIDIMSLKRMLEKLGVP 80
Query: 323 HNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEE 366
E + E + + + ++ L ++ I
Sbjct: 81 KTH----LELKRLIREVSSGSEETFSYSDFLRMMLGKRSAILRM 120
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 33.7 bits (77), Expect = 0.027
Identities = 10/60 (16%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 330 EEKDKFDNEYDT--NKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
EE+ K D ++ + G + ++ ++ S + + + ++A +D ++D + E
Sbjct: 30 EERAKHDQQFHSLKPISGFITGDQARNFFFQSG--LPQPVLAQIWALADMNNDGRMDQVE 87
Score = 29.0 bits (65), Expect = 1.2
Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 12/59 (20%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSA----PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
F++ +G + + ++F P+ ++ Q+ D + DG + EF
Sbjct: 38 QFHSLK-PISGFITGDQARNFFFQSGLPQP-------VLAQIWALADMNNDGRMDQVEF 88
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH
domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A
1f8h_A 1ff1_A
Length = 106
Score = 33.6 bits (77), Expect = 0.027
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 330 EEKDKFDNEYDT--NKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
E+K K+D +D+ +G L+ +++ ++ S + + + ++ SD DHD +L DE
Sbjct: 12 EDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDE 69
Score = 28.2 bits (63), Expect = 2.0
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 12/59 (20%)
Query: 261 IFNAADGDKNGVLDKTEYQSFSA----PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
IF++ NG L + + P + ++ +V E D D DG L EF
Sbjct: 20 IFDSLS-PVNGFLSGDKVKPVLLNSKLPVD-------ILGRVWELSDIDHDGMLDRDEF 70
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1mr8_A
Length = 93
Score = 32.8 bits (75), Expect = 0.032
Identities = 10/55 (18%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
++ G+ + + + + E ++ +E D + DG ++FQEF+
Sbjct: 19 YSLIKGNF-HAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFL 72
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 34.9 bits (79), Expect = 0.034
Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Query: 262 FNAADGDK-NGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMG 317
F D +G L TE AP + E D D D +++ E+ G
Sbjct: 161 FGQLDQHPIDGYLSHTELAPLRAPLIPMEH---CTTRFFETCDLDNDKYIALDEWAG 214
Score = 31.5 bits (70), Expect = 0.34
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 317 GDRGQKHNRQYIVEEKDKFDNEYDTNK-DGLLNENEILSWIVPSNEDIAEEEVNHLFAAS 375
GD +K+ YI +F + D + DG L+ E+ P E F
Sbjct: 143 GDHPEKNYNMYIFPVHWQF-GQLDQHPIDGYLSHTELAPLRAPLIPM--EHCTTRFFETC 199
Query: 376 DDDHDDLLSFDE 387
D D+D ++ DE
Sbjct: 200 DLDNDKYIALDE 211
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1;
phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 35.3 bits (80), Expect = 0.040
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 338 EYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ D NKD +N E+ ++ N + + +F D D L +EI
Sbjct: 19 KADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIET 71
Score = 32.6 bits (73), Expect = 0.29
Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 157 MQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR----FEDADE 212
M + + + L+ D NKDN ++ KE + + L+++ + F + D
Sbjct: 3 MDQRQKLQHWIHSCLRKADKNKDNKMNFKE----LKDFLKELNIQVDDGYARKIFRECDH 58
Query: 213 NTDGVVDWDE 222
+ ++ +E
Sbjct: 59 SQTDSLEDEE 68
Score = 31.8 bits (71), Expect = 0.46
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEF 315
AD +K+ ++ E + F E + + +++ E D + L +E
Sbjct: 14 HSCLRKADKNKDNKMNFKELKDF-LKELNIQVDDGYARKIFRECDHSQTDSLEDEEI 69
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 32.5 bits (75), Expect = 0.041
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 167 LRLLLKNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE 222
L+ L K +D + I EL+ L+ L E + AD + G +D+ E
Sbjct: 25 LKELFKMIDTDNSGTITFDELKD-GLKRVGSELMESEIKDLMDAADIDKSGTIDYGE 80
Score = 31.0 bits (71), Expect = 0.12
Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 305 DKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIA 364
G + + ++ + + I K+ F DT+ G + +E+ + ++
Sbjct: 1 HSSGHIDDDDKH--MAERLSEEEIGGLKELFK-MIDTDNSGTITFDELKDGLKRVGSELM 57
Query: 365 EEEVNHLFAASDDDHDDLLSFDE 387
E E+ L A+D D + + E
Sbjct: 58 ESEIKDLMDAADIDKSGTIDYGE 80
Score = 29.0 bits (66), Expect = 0.75
Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 17/66 (25%)
Query: 259 KMIFNAADGDKNGVLDKTEY--------QSFSAPEEHPHMFPILIKQVLEEKDTDKDGFL 310
K +F D D +G + E E IK +++ D DK G +
Sbjct: 26 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESE---------IKDLMDAADIDKSGTI 76
Query: 311 SFQEFM 316
+ EF+
Sbjct: 77 DYGEFI 82
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 32.9 bits (76), Expect = 0.041
Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 8/90 (8%)
Query: 302 KDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENE---ILSWIV 357
+EF G ++ K F D +K G + E+E L
Sbjct: 16 AACSAADSFKHKEFFAKVGLASKSL---DDVKKAF-YVIDQDKSGFIEEDELKLFLQNFS 71
Query: 358 PSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
PS + + E A D D D ++ DE
Sbjct: 72 PSARALTDAETKAFLADGDKDGDGMIGVDE 101
Score = 29.5 bits (67), Expect = 0.72
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSF--SAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
K F D DK+G +++ E + F + + K L + D D DG + EF
Sbjct: 44 KKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFA 103
Score = 28.3 bits (64), Expect = 2.0
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 178 KDNN--IDRKELQAWILRSFRM----LSVEESNSRFEDADENTDGVVDWDE 222
+D + I+ EL+ L++F L+ E+ + D D++ DG++ DE
Sbjct: 52 QDKSGFIEEDELKL-FLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDE 101
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 33.7 bits (78), Expect = 0.046
Identities = 17/102 (16%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
Query: 295 IKQVLEEKDTDK--DGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNE 349
I ++L ++ ++F+EF + ++ + + +D +G +
Sbjct: 46 INKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFEDFVEGL-RVFDKEGNGTVMG 104
Query: 350 NEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEH 391
E+ + E + EEEV L +D + ++++ V+H
Sbjct: 105 AELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKH 145
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR
{Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 33.2 bits (77), Expect = 0.046
Identities = 13/96 (13%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 299 LEEKDTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSW 355
+ E ++ + ++F + E F +D + G++ E+
Sbjct: 43 ITEIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGF-QVFDKDATGMIGVGELRYV 101
Query: 356 IVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEH 391
+ E ++ EE++ L D ++++ + V+
Sbjct: 102 LTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQM 136
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 33.2 bits (77), Expect = 0.053
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEIL 353
+ ++ E D D + + F EF+ ++ +E + F +D N DGL++ E+
Sbjct: 49 VADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAF-KVFDKNGDGLISAAELK 107
Query: 354 SWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+ E + + EV+ + D ++ +
Sbjct: 108 HVLTSIGEKLTDAEVDEMLREV-SDGSGEINIKQ 140
Score = 27.4 bits (62), Expect = 4.9
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 19/120 (15%)
Query: 303 DTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP- 358
D D G +S E M G + E NE D + + + +E L+ +
Sbjct: 21 DKDNSGSISASELATVMRSLGLSPSE----AEVADLMNEIDVDGNHAIEFSEFLALMSRQ 76
Query: 359 SNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATDFGDHLTNPHL---IKE 415
+ +E+E+ F D + D L+S E+ T G+ LT+ + ++E
Sbjct: 77 LKCNDSEQELLEAFKVFDKNGDGLISAAELKHV--------LTSIGEKLTDAEVDEMLRE 128
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins, protein
dynamics, binding protein; 2.10A {Homo sapiens} PDB:
2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 32.5 bits (74), Expect = 0.060
Identities = 8/59 (13%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
+ + + K+ ++ E + + ++++ D + DG +SF E+
Sbjct: 20 YVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYW 78
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 33.2 bits (77), Expect = 0.062
Identities = 17/95 (17%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 296 KQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEILS 354
+ LE ++ G ++F F+ G+K N + ++ F +D G ++E+ +
Sbjct: 42 DEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAF-ACFDEEASGFIHEDHLRE 100
Query: 355 WIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIV 389
+ + +EEV+ ++ + D ++ E
Sbjct: 101 LLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFT 135
Score = 30.5 bits (70), Expect = 0.41
Identities = 21/155 (13%), Positives = 46/155 (29%), Gaps = 47/155 (30%)
Query: 174 MDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTEDA 233
+D N+D ID+++L + ++ E G +++ L
Sbjct: 16 IDQNRDGFIDKEDLHD----MLASMGKNPTDEYLEGMMSEAPGPINFTMFLT-------- 63
Query: 234 DDIDVTNLGDDMNLLLLFTQMVKQD-----KMIFNAADGDKNGVLDKTEYQSFSA----- 283
+ ++ D + F D + +G + + +
Sbjct: 64 ---------------MFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDR 108
Query: 284 --PEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
EE + ++ E DK G ++ EF
Sbjct: 109 FTDEE--------VDEMYREAPIDKKGNFNYVEFT 135
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1irj_A*
Length = 113
Score = 32.6 bits (74), Expect = 0.071
Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 264 AADGDKNGVLDKTEYQS-----FSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ L++ E++ + + +I+ ++E+ DT+ D LSF+EF+
Sbjct: 22 SVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding
protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Length = 113
Score = 32.2 bits (73), Expect = 0.090
Identities = 9/57 (15%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 264 AADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
+ L+K+E + E + ++++ D+++D + FQE+
Sbjct: 32 SGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 88
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB:
2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 31.7 bits (72), Expect = 0.094
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 6/55 (10%)
Query: 268 DKNGVLDKTEYQSFSAPEEHPHMF------PILIKQVLEEKDTDKDGFLSFQEFM 316
++ +DK + + + V E+KD ++D + F EF+
Sbjct: 21 RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFL 75
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 33.7 bits (76), Expect = 0.11
Identities = 9/61 (14%), Positives = 27/61 (44%)
Query: 330 EEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIV 389
E N +D K G+++ + + ++ ++ E E + + D + +++F +
Sbjct: 725 NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFI 784
Query: 390 E 390
+
Sbjct: 785 D 785
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 33.4 bits (77), Expect = 0.15
Identities = 15/160 (9%), Positives = 36/160 (22%), Gaps = 28/160 (17%)
Query: 157 MQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDG 216
M R + ++K + + + S+ + + +A N
Sbjct: 307 MLATRNFSVRKQEIIKVTEQLIEAISNGD------FESYTKMCDPGMTAFEPEALGNLVE 360
Query: 217 VVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKT 276
+D+ E + +L + GD++ +
Sbjct: 361 GLDFHRFYFENL-------WSRNSKPVHTTILNPHIHL-----------MGDESACIAYI 402
Query: 277 EYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ P + +DG F
Sbjct: 403 RITQYLDAGGIPRT----AQSEETRVWHRRDGKWQIVHFH 438
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal
binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A
2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 30.9 bits (70), Expect = 0.17
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 264 AADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
+ L K E + E + +I ++ + D ++D + FQEF+
Sbjct: 22 SVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFI 78
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 30.9 bits (70), Expect = 0.20
Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 264 AADGDKNGVLDKTEYQSFSAPEEHPHMF--PILIKQVLEEKDTDKDGFLSFQEFM 316
A + L E++ ++ PH+ + + ++ D ++D L F E+
Sbjct: 32 ARQEGRKDSLSVNEFKEL-VTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYW 85
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type
four-helix bundle, metal binding protein; NMR {Rattus
norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A
2l0p_A 2jpt_A
Length = 93
Score = 30.5 bits (69), Expect = 0.21
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
+ +GDK L K E + E + + ++++E D + DG + FQEF+
Sbjct: 18 HSGKEGDKY-KLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFV 75
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin),
ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2
PDB: 1nsh_A
Length = 99
Score = 30.6 bits (69), Expect = 0.22
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 264 AADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
A N + KTE+ F E P ++ +++++ D D DG L FQEF+
Sbjct: 23 AGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFL 79
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 30.3 bits (69), Expect = 0.22
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 303 DTDKDGFLSFQEF---MGDRGQKHN--RQYIVEEKDKFDNEYDTNKDGLLNENE 351
D + DG+++ E M + + E K D N DG +++ E
Sbjct: 17 DANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEE 70
Score = 29.9 bits (68), Expect = 0.28
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
++++ D + DG +S +EF+
Sbjct: 51 SAKLIKMADKNSDGKISKEEFL 72
Score = 29.5 bits (67), Expect = 0.37
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 337 NEYDTNKDGLLNENEI------LSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVE 390
+ D N DG + E+ L ++D +E L +D + D +S +E +
Sbjct: 14 KKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLN 73
Score = 27.2 bits (61), Expect = 2.9
Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 8/55 (14%)
Query: 175 DLNKDNNIDRKELQAWILRSFRMLSVEESNSRFED-------ADENTDGVVDWDE 222
D N D + ELQ + + + E AD+N+DG + +E
Sbjct: 17 DANGDGYVTALELQT-FMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEE 70
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 30.4 bits (69), Expect = 0.28
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE 222
DLN + +ID L+ +L + E + + + +
Sbjct: 39 MEFDLNGNGDIDIMSLKR-MLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 89
Score = 28.1 bits (63), Expect = 2.0
Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 13/70 (18%)
Query: 253 QMVKQDKMIFNAADGDKNGVLDKTEYQS------FSAPEEHPHMFPILIKQVLEEKDTDK 306
++ K + D + NG +D + +K+++ E +
Sbjct: 29 SKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLE-------LKKLIGEVSSGS 81
Query: 307 DGFLSFQEFM 316
S+ +F+
Sbjct: 82 GETFSYPDFL 91
Score = 27.7 bits (62), Expect = 2.4
Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 296 KQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSW 355
Q E D FL ++ D + + K+K+ E+D N +G ++ +
Sbjct: 2 AQQEERLDEINKQFLDDPKYSSD---EDLPSKLEGFKEKYM-EFDLNGNGDIDIMSLKRM 57
Query: 356 IVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
+ E+ L + S+ +
Sbjct: 58 LEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 89
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 30.1 bits (68), Expect = 0.29
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMF-PILIKQVLEEKDTDKDGFLSFQEFM 316
++ +G K L + E + E I +++ D + D + F+E+
Sbjct: 19 YSGREGSK-LTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYS 73
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding
protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A
1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X*
3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A*
3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 30.1 bits (68), Expect = 0.30
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
++ +GDK L K+E + E + ++ +V+E D++ DG FQEFM
Sbjct: 18 YSGREGDK-HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFM 75
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 30.2 bits (68), Expect = 0.30
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
++ ++GDK L K E + E + P+L+++++ + D++KD + F EF+
Sbjct: 19 YSGSEGDK-YKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFV 76
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 30.2 bits (68), Expect = 0.31
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPE----EHPHMFPILIKQVLEEKDTDKDGFLSFQEFM 316
+ GDK L + E + E + + DT+KD + F E++
Sbjct: 19 YAGRCGDKY-KLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYV 76
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 30.2 bits (68), Expect = 0.33
Identities = 9/57 (15%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 264 AADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
+ L+K+E + E + ++++ D+++D + FQE+
Sbjct: 20 SGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 76
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A
{Homo sapiens} SCOP: a.39.1.3
Length = 151
Score = 31.0 bits (69), Expect = 0.35
Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Query: 262 FNAADGDK-NGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMG 317
F D +G L TE AP + E D D D +++ E+ G
Sbjct: 83 FGQLDQHPIDGYLSHTELAPLRAPLIPMEH---CTTRFFETCDLDNDKYIALDEWAG 136
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo
sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Length = 139
Score = 30.7 bits (69), Expect = 0.36
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 328 IVEEKDKFDNEYDT--NKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSF 385
+ ++K +D + T +G + +V S + + ++ +D D D LL
Sbjct: 46 VGKDKPTYDEIFYTLSPVNGKITGANAKKEMVKSK--LPNTVLGKIWKLADVDKDGLLDD 103
Query: 386 DE 387
+E
Sbjct: 104 EE 105
Score = 27.2 bits (60), Expect = 5.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 303 DTDKDGFLSFQEF 315
D DKDG L +EF
Sbjct: 94 DVDKDGLLDDEEF 106
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 30.2 bits (68), Expect = 0.38
Identities = 9/57 (15%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 264 AADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
+ L+K+E + E + ++++ D+++D + FQE+
Sbjct: 23 SGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 79
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 29.8 bits (67), Expect = 0.41
Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Query: 264 AADGDKNGVLDKTEYQSFSAPEEHPHMF----PILIKQVLEEKDTDKDGFLSFQEFM 316
+ L K E + E + + ++L++ D + D + F EF+
Sbjct: 19 SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 30.6 bits (69), Expect = 0.42
Identities = 7/52 (13%), Positives = 16/52 (30%), Gaps = 2/52 (3%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE 222
DLN + ID L+ ++ + E + + + +
Sbjct: 57 MEFDLNNEGEIDLMSLKR-MMEKLGVPKTHLEMKKMISEVTGGVSDTISYRD 107
Score = 29.1 bits (65), Expect = 1.4
Identities = 8/73 (10%), Positives = 23/73 (31%), Gaps = 13/73 (17%)
Query: 250 LFTQMVKQDKMIFNAADGDKNGVLDKTEYQS------FSAPEEHPHMFPILIKQVLEEKD 303
+ + K + D + G +D + +K+++ E
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLE-------MKKMISEVT 96
Query: 304 TDKDGFLSFQEFM 316
+S+++F+
Sbjct: 97 GGVSDTISYRDFV 109
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 29.5 bits (67), Expect = 0.50
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 175 DLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE 222
D + +I KEL ++R + + EE ++ E+ DE+ G +D++E
Sbjct: 30 DADGGGDISTKELGT-VMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEE 77
Score = 27.6 bits (62), Expect = 2.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
+ ++EE D D G + F+EF+
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFL 79
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos
taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A
1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A
1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 28.7 bits (65), Expect = 0.58
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
+ +++EE D + DG +SF+EF+
Sbjct: 47 LDEMIEEVDKNGDGEVSFEEFL 68
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 29.0 bits (66), Expect = 0.60
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 172 KNMDLNKDNNIDRKELQAWILRSF-RMLSVEESNSRFEDADENTDGVVDWDE 222
D NK +ID EL+ +R+ + E + D +G + +D+
Sbjct: 14 DLFDTNKTGSIDYHELKV-AMRALGFDVKKPEILELMNEYDREGNGYIGFDD 64
Score = 27.1 bits (61), Expect = 2.6
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
I +++ E D + +G++ F +F+
Sbjct: 45 ILELMNEYDREGNGYIGFDDFL 66
Score = 26.7 bits (60), Expect = 3.1
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 328 IVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
E K+ FD +DTNK G ++ +E+ + D+ + E+ L D + + + FD+
Sbjct: 6 KQEIKEAFD-LFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDD 64
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 29.1 bits (66), Expect = 0.63
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 175 DLNKDNNIDRKELQAWILRSF--RMLSVEESNSRFEDADENTDGVVDWDE 222
D N D ID E + I++ L+ E ++ADE+ +GV+D E
Sbjct: 18 DANGDGVIDFDEFKF-IMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Score = 27.1 bits (61), Expect = 2.7
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
+++ ++E D D +G + EFM
Sbjct: 47 VEEAMKEADEDGNGVIDIPEFM 68
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex,
membrane protein, endocytosis; HET: ANP; 3.10A {Mus
musculus}
Length = 550
Score = 31.3 bits (70), Expect = 0.66
Identities = 17/120 (14%), Positives = 39/120 (32%), Gaps = 4/120 (3%)
Query: 270 NGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIV 329
+ E + + G E + + +
Sbjct: 395 QDIAKLMPLLRQEELESVEAGVAGGAFEGTRMGPFVERGPDEAIEDGEEGSEDDAEWVVT 454
Query: 330 EEKDKFDNEYDT--NKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDE 387
++K K+D + DG L+ ++ +W+V + + + ++ SD D D +L +E
Sbjct: 455 KDKSKYDEIFYNLAPADGKLSGSKAKTWMVGTK--LPNSVLGRIWKLSDVDRDGMLDDEE 512
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 28.6 bits (65), Expect = 0.73
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 178 KDNN--IDRKELQAWILRSFRM-LSVEESNSRFEDADENTDGVVDWDE 222
+D + I EL+ + L EE ++ +AD + DG V+++E
Sbjct: 17 QDGDGHITVDELRR-AMAGLGQPLPQEELDAMIREADVDQDGRVNYEE 63
Score = 27.5 bits (62), Expect = 1.9
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
+ ++ E D D+DG ++++EF
Sbjct: 44 LDAMIREADVDQDGRVNYEEFA 65
Score = 27.1 bits (61), Expect = 2.1
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Query: 303 DTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE 351
D D DG ++ E M GQ EE D E D ++DG +N E
Sbjct: 16 DQDGDGHITVDELRRAMAGLGQPLP----QEELDAMIREADVDQDGRVNYEE 63
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory
light chain LC-2, mantle muscle; rigor-like, squid,
contractIle protein; 2.60A {Todarodes pacificus} PDB:
2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 29.9 bits (68), Expect = 0.78
Identities = 15/96 (15%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 301 EKDTDKDGFLSFQEF--MGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEILSWIV 357
+ +E + + + +E + F +D GL++ EI + +
Sbjct: 54 GTKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAF-KTFDREGQGLISSAEIRNVLK 112
Query: 358 PSNEDIAEEEVNHLFAASDDDHDD--LLSFDEIVEH 391
E I E++ N +F D D + ++++++
Sbjct: 113 MLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKK 148
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z
1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z
3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z
2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 29.8 bits (68), Expect = 0.92
Identities = 15/103 (14%), Positives = 38/103 (36%), Gaps = 13/103 (12%)
Query: 297 QVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFD------NEYDTNKDGLLNEN 350
+ + L F+EF+ + E+ F +D G ++
Sbjct: 50 FAVGGTHKMGEKSLPFEEFL-----PAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGA 104
Query: 351 EILSWIVPSNEDIAEEEVNHLFAASDDDHDD--LLSFDEIVEH 391
E+ + E +++E+V+ + +D D + +++ V+
Sbjct: 105 ELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKK 147
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens}
PDB: 2rgi_A 4duq_A
Length = 98
Score = 28.6 bits (64), Expect = 1.2
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMF-----PILIKQVLEEKDTDKDGFLSFQEFM 316
+++ +GDK L K E + +E P +K+++ D + D + FQE+
Sbjct: 20 YSSQEGDK-FKLSKGEMKEL-LHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYA 77
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free,
signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A
2cnp_A 2jtt_A
Length = 90
Score = 28.6 bits (64), Expect = 1.2
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 262 FNAADGDKNGVLDKTEYQSFSAPEEHPHMF--PILIKQVLEEKDTDKDGFLSFQEFM 316
++ +GDK L K E + E I +++E+ D +KD ++FQE++
Sbjct: 19 YSGREGDK-HTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 28.3 bits (64), Expect = 1.5
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 303 DTDKDGFLSFQEF---MGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENE---ILSWI 356
D D++G++S E M + G+K EE ++ E D + DG +N E ++ +
Sbjct: 19 DKDQNGYISASELRHVMINLGEKLT----DEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 74
Query: 357 VPSNEDIAEEEVNHLFAA 374
+ F++
Sbjct: 75 RGGGGGNGWSRLRRKFSS 92
Score = 27.6 bits (62), Expect = 2.8
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 175 DLNKDNNIDRKELQAWILRSFRM-LSVEESNSRFEDADENTDGVVDWDE 222
D +++ I EL+ ++ + L+ EE ++AD + DG V+++E
Sbjct: 19 DKDQNGYISASELRH-VMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Score = 26.4 bits (59), Expect = 6.3
Identities = 8/22 (36%), Positives = 18/22 (81%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
++Q+++E D D DG ++++EF+
Sbjct: 47 VEQMIKEADLDGDGQVNYEEFV 68
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 28.9 bits (64), Expect = 2.0
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 165 KRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSR--------FEDADENTDG 216
RLR +D N D + +E++ I S + + R E+ D G
Sbjct: 98 NRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLG 157
Query: 217 VVDWDE 222
++ ++
Sbjct: 158 YIEMED 163
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 27.6 bits (62), Expect = 2.1
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 175 DLNKDNNIDRKELQAWILRSFRM-LSVEESNSRFEDADENTDGVVDWDE 222
D + + I EL+ ++ + L+ EE + +AD + DG V+++E
Sbjct: 39 DKDGNGYISAAELRH-VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Score = 26.5 bits (59), Expect = 5.1
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 305 DKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIA 364
L FQ M D + E ++ F D + +G ++ E+ + E +
Sbjct: 11 SSGENLYFQSLMKDTDSEE------EIREAF-RVEDKDGNGYISAAELRHVMTNLGEKLT 63
Query: 365 EEEVNHLFAASDDDHDDLLSFDE 387
+EEV+ + +D D D ++++E
Sbjct: 64 DEEVDEMIREADIDGDGQVNYEE 86
Score = 26.5 bits (59), Expect = 5.4
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
+ +++ E D D DG ++++EF+
Sbjct: 67 VDEMIREADIDGDGQVNYEEFV 88
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 28.8 bits (65), Expect = 2.4
Identities = 17/97 (17%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Query: 296 KQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEE-KDKFDNEYDTNKDGLLNENEILS 354
+Q L+ + G ++F F+ G + + + F N +D DG E +
Sbjct: 92 EQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAF-NLFD-EGDGKCKEETLKR 149
Query: 355 WIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEH 391
+ E +++EV+ + + D + L+ + +
Sbjct: 150 SLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQI 186
Score = 27.7 bits (62), Expect = 6.4
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
+ Q L E D +G + ++F
Sbjct: 163 VDQALSEAPIDGNGLIDIKKFA 184
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE
calcium entry, signaling protein; NMR {Homo sapiens}
Length = 150
Score = 28.4 bits (63), Expect = 2.7
Identities = 9/73 (12%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Query: 259 KMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGD 318
+ I D DK+G ++ E F + +D ++ ++
Sbjct: 18 QTIHKQMDDDKDGGIEVEESDEFIREDMKYKDA-----TNKHSHLHREDKHITIEDLWKR 72
Query: 319 RGQKHNRQYIVEE 331
+ +E+
Sbjct: 73 WKTSEVHNWTLED 85
Score = 27.3 bits (60), Expect = 7.1
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 167 LRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDAD---ENTDGVVDWDEH 223
L+ + K MD +KD I+ +E +I + +S D D W
Sbjct: 17 LQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNKHSHLHREDKHITIEDLWKRWKTS 76
Query: 224 LKETYGTED 232
+ ED
Sbjct: 77 EVHNWTLED 85
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 27.9 bits (63), Expect = 3.6
Identities = 11/80 (13%), Positives = 33/80 (41%)
Query: 299 LEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVP 358
++ L++++++ + + VEE K +D N G L ++++ + +
Sbjct: 53 EKKIKELYGDNLTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTT 112
Query: 359 SNEDIAEEEVNHLFAASDDD 378
+ + ++E A +
Sbjct: 113 WGDALTDQEAIDALNAFSSE 132
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual
protein-hydrolase complex, cellulosome; 1.90A
{Bacteroides cellulosolvens}
Length = 71
Score = 26.5 bits (59), Expect = 4.1
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 175 DLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVD 219
DLN D I+ ++ IL + E AD N DGV++
Sbjct: 8 DLNGDGVINMADVM--ILAQS-FGKAIGNPGVNEKADLNNDGVIN 49
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase,
ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina
acetivorans}
Length = 580
Score = 28.7 bits (65), Expect = 4.7
Identities = 8/47 (17%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 206 RFEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFT 252
+ + + +G +D+ + L+E+ + +V+ +D+ L+ F+
Sbjct: 188 KAKVGGDVLEGWIDFRKELEESSPIFERPTGEVSTKNEDI-CLVYFS 233
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially
structured protein, CAM-like; NMR {Entamoeba
histolytica} PDB: 2lc5_A
Length = 85
Score = 26.1 bits (58), Expect = 6.2
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 295 IKQVLEEKDTDKDGFLSFQEFM 316
I +++++ D D G + F+
Sbjct: 52 ISEIVKDYDKDNSGKFDQETFL 73
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain,
EF-SAM, STIM1, store operated calcium entry regulator,
SOCE; NMR {Homo sapiens}
Length = 150
Score = 27.3 bits (60), Expect = 6.8
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 167 LRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDE 222
+R + K MD + + ++D +E ++ + D ++ ++
Sbjct: 17 VRNIHKLMDDDANGDVDVEESDEFLREDLNY----HDPTVKHSTFHGEDKLISVED 68
>3r1m_A Putative uncharacterized protein ST0318; sulfolobus
fructose-1,6-bisphosphatase-like fold, hydrolase/ Mg
binding, metal binding protein; 1.50A {Sulfolobus
tokodaii} PDB: 1umg_A*
Length = 385
Score = 27.6 bits (61), Expect = 9.6
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 221 DEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAAD 266
++ L D +T++GDD+ L++ T+ K+ A +
Sbjct: 31 NKVLASAKEQGIILDYYITHVGDDLQLIMTHTRGELDTKVHETAWN 76
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.315 0.135 0.397
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,592,858
Number of extensions: 408135
Number of successful extensions: 2010
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1276
Number of HSP's successfully gapped: 473
Length of query: 417
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 321
Effective length of database: 4,021,377
Effective search space: 1290862017
Effective search space used: 1290862017
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.0 bits)