Query psy534
Match_columns 145
No_of_seqs 124 out of 1174
Neff 9.5
Searched_HMMs 29240
Date Sat Aug 17 00:04:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy534.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/534hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fa8_A Secreted protein BARF1; 99.7 1.9E-16 6.6E-21 110.1 11.4 126 7-135 4-197 (203)
2 2ny1_B T-cell surface glycopro 99.7 1.9E-17 6.6E-22 112.2 5.8 124 6-129 5-167 (184)
3 3jz7_A MCAR, CAR, coxsackievir 99.7 6E-17 2.1E-21 111.3 7.9 121 9-129 13-200 (214)
4 2v5t_A NCAM2, N-CAM 2, neural 99.7 3.4E-16 1.2E-20 105.8 10.2 115 8-129 14-176 (189)
5 3r4d_A CEA-related cell adhesi 99.7 8.2E-16 2.8E-20 105.6 12.2 116 8-129 11-187 (208)
6 4i0k_A CD276 antigen; immunogl 99.7 4.4E-16 1.5E-20 108.1 10.6 137 8-144 7-214 (222)
7 2va4_A NCAM2, N-CAM 2, neural 99.6 1.5E-15 5.2E-20 102.8 10.5 115 7-129 15-181 (192)
8 4frw_A Poliovirus receptor-rel 99.6 2.7E-15 9.1E-20 102.8 11.3 122 8-129 11-199 (218)
9 2a38_A Titin; Z1Z2, structural 99.6 2.1E-15 7.2E-20 102.4 10.7 117 8-129 17-183 (194)
10 3kld_A Contactin 4, axcam, BIG 99.6 6.2E-16 2.1E-20 116.1 8.5 112 9-129 218-371 (384)
11 2wim_A N-CAM 2, NCAM2, neural 99.6 2.4E-15 8.2E-20 108.0 11.0 124 9-139 111-287 (291)
12 3bp6_B Programmed cell death 1 99.6 4E-15 1.4E-19 102.0 11.2 120 8-129 14-181 (202)
13 2j8h_A Titin, connectin; cardi 99.6 1.3E-15 4.5E-20 103.8 8.5 118 8-129 16-185 (197)
14 3s97_C Contactin-1; carbonic a 99.6 2.4E-15 8.3E-20 102.4 9.7 116 8-129 20-189 (201)
15 3grw_A Fibroblast growth facto 99.6 2.5E-15 8.4E-20 105.4 9.3 117 8-129 27-206 (241)
16 3p2t_A Leukocyte immunoglobuli 99.6 3.7E-15 1.3E-19 102.0 9.2 114 8-129 16-179 (196)
17 2iep_A Muscle-specific kinase 99.6 2.9E-15 1E-19 101.5 8.5 114 9-129 20-177 (192)
18 2yd6_A PTPRD protein; hydrolas 99.6 5.5E-15 1.9E-19 102.2 10.0 126 8-138 18-206 (212)
19 4f80_A Butyrophilin subfamily 99.6 5.5E-15 1.9E-19 103.2 9.8 90 40-129 65-201 (226)
20 1qz1_A Neural cell adhesion mo 99.6 6.8E-15 2.3E-19 105.7 10.5 114 9-129 113-278 (291)
21 1epf_A NCAM, protein (neural c 99.6 2.1E-14 7.2E-19 97.3 12.4 121 8-132 14-182 (191)
22 2v44_A NCAM2, neural cell adhe 99.6 2.4E-14 8.3E-19 96.9 12.7 119 8-132 14-178 (189)
23 2yd1_A Tyrosine-protein phosph 99.6 1.1E-14 3.9E-19 100.5 11.1 118 8-129 18-187 (212)
24 1f97_A Junction adhesion molec 99.6 6.7E-15 2.3E-19 100.9 9.6 115 8-129 13-193 (212)
25 3ojm_B Fibroblast growth facto 99.6 3.8E-15 1.3E-19 103.4 8.4 116 9-129 32-209 (231)
26 2rik_A Titin; I-SET IG fold, p 99.6 1.7E-14 5.9E-19 103.3 11.8 115 9-129 112-272 (284)
27 1nbq_A JAM, junctional adhesio 99.6 2.9E-15 9.9E-20 102.5 7.2 115 8-129 16-195 (209)
28 2if7_A SLAM family member 6; N 99.6 1.6E-14 5.6E-19 99.1 10.4 116 9-130 11-181 (193)
29 2r15_A Myomesin-1; sarcomeric 99.6 1.3E-14 4.3E-19 99.8 9.8 109 15-129 21-198 (212)
30 1jbj_A CD3 epsilon and gamma e 99.6 1.4E-15 4.8E-20 103.9 4.7 113 5-134 8-182 (186)
31 3sgj_C Human FCG3A receptor; r 99.6 5.5E-15 1.9E-19 102.4 7.6 106 8-129 19-161 (204)
32 2fbo_J V1V2;, variable region- 99.6 4.5E-15 1.5E-19 104.5 7.1 118 8-129 14-237 (250)
33 2rik_A Titin; I-SET IG fold, p 99.6 3.4E-14 1.2E-18 101.8 11.6 115 9-129 18-179 (284)
34 3sbw_C Programmed cell death 1 99.6 1.3E-14 4.3E-19 100.6 9.1 137 8-144 13-219 (222)
35 2wv3_A Neuroplastin; igcam, me 99.6 2.7E-14 9.3E-19 97.0 10.5 108 11-129 18-178 (190)
36 3b43_A Titin; I-SET IG fold, e 99.6 3.7E-14 1.3E-18 111.5 12.7 115 9-129 304-464 (570)
37 3mj6_A Junctional adhesion mol 99.6 9.9E-15 3.4E-19 103.9 8.6 121 8-129 17-225 (268)
38 3rbs_A Myomesin-1; immunoglobu 99.6 1.6E-14 5.3E-19 100.5 9.3 116 10-129 16-195 (207)
39 1fnl_A Low affinity immunoglob 99.6 4.8E-15 1.7E-19 99.8 6.5 106 8-129 19-161 (175)
40 1hng_A CD2; T lymphocyte adhes 99.6 2.7E-15 9.3E-20 101.7 5.2 115 9-129 9-164 (176)
41 2gi7_A GPVI protein; IG-like d 99.6 1.7E-14 6E-19 98.0 9.2 105 8-129 19-168 (184)
42 3lcy_A Titin; A-BAND, IG tande 99.6 1.3E-14 4.5E-19 98.4 8.6 116 8-129 19-184 (197)
43 2d3v_A Leukocyte immunoglobuli 99.6 2.9E-14 9.9E-19 97.6 10.0 114 8-129 16-180 (196)
44 1f2q_A High affinity immunoglo 99.6 4.8E-15 1.6E-19 99.9 6.0 106 8-129 16-158 (176)
45 2v5m_A Dscam; neurobiology SPL 99.6 1.4E-14 4.9E-19 108.0 9.1 112 11-129 227-377 (388)
46 2nzi_A Titin; IG-domain, FNIII 99.6 6E-14 2E-18 101.4 11.8 118 8-129 16-185 (305)
47 3b43_A Titin; I-SET IG fold, e 99.5 5.3E-14 1.8E-18 110.7 12.3 115 9-129 210-371 (570)
48 2zg1_A Sialic acid-binding IG- 99.5 8.2E-14 2.8E-18 96.0 11.8 121 8-129 12-201 (214)
49 4fmk_A Poliovirus receptor-rel 99.5 8.5E-14 2.9E-18 95.7 11.7 122 8-129 13-205 (225)
50 3p3y_A Neurofascin; IG domains 99.5 1.4E-14 4.7E-19 108.3 8.3 112 9-129 235-391 (404)
51 2jll_A NCAM2, neural cell adhe 99.5 8.7E-14 3E-18 103.7 12.5 117 9-129 13-182 (389)
52 3ry4_A Low affinity immunoglob 99.5 3.3E-14 1.1E-18 94.8 9.1 106 8-129 16-158 (170)
53 2vr9_A Roundabout 1, ROBO; imm 99.5 5.4E-14 1.8E-18 97.1 10.3 119 8-129 21-194 (217)
54 3laf_A Deleted in colorectal c 99.5 4.4E-14 1.5E-18 105.7 10.4 124 9-138 134-313 (403)
55 2yd9_A Receptor-type tyrosine- 99.5 4.2E-14 1.4E-18 102.5 10.0 112 10-129 122-279 (304)
56 1ry7_B FGFR-3, fibroblast grow 99.5 1.8E-14 6.2E-19 105.5 7.7 115 10-129 137-315 (334)
57 1rhf_A Tyrosine-protein kinase 99.5 6.7E-14 2.3E-18 94.2 9.8 116 8-129 14-170 (182)
58 1bih_A Hemolin; insect immunit 99.5 5E-14 1.7E-18 105.1 9.9 117 9-129 225-384 (395)
59 2c5d_C AXL oncogene, tyrosine- 99.5 4.2E-14 1.4E-18 96.3 8.8 119 8-129 14-180 (195)
60 3laf_A Deleted in colorectal c 99.5 1.5E-14 5.1E-19 108.3 7.0 112 10-129 235-389 (403)
61 3k0w_A Mucosa-associated lymph 99.5 6.9E-14 2.3E-18 97.2 9.8 106 9-129 31-189 (218)
62 4fom_A Poliovirus receptor-rel 99.5 2.3E-14 7.8E-19 104.0 7.5 126 10-140 128-304 (308)
63 2x1w_L Vascular endothelial gr 99.5 3.1E-14 1.1E-18 98.8 7.9 118 12-138 25-209 (213)
64 2y25_A Myomesin; structural pr 99.5 1.2E-13 4.2E-18 100.1 11.2 115 9-129 111-303 (317)
65 3qs9_E FL cytokine receptor; i 99.5 3.7E-14 1.3E-18 111.1 9.0 121 9-129 240-402 (527)
66 3d9a_L Light chain of hyhel10 99.5 2.4E-14 8.2E-19 98.8 7.0 119 8-129 13-201 (213)
67 2v9r_A Roundabout homolog 1; p 99.5 2.4E-14 8.1E-19 98.3 6.6 120 9-129 22-189 (212)
68 1wio_A CD4, T-cell surface gly 99.5 1E-14 3.5E-19 108.4 5.1 122 8-129 6-166 (363)
69 1cs6_A Axonin-1; neural cell a 99.5 7.2E-14 2.5E-18 104.1 9.3 108 10-129 221-370 (382)
70 1uct_A Immunoglobulin alpha FC 99.5 8.2E-14 2.8E-18 97.5 8.7 113 8-128 20-180 (218)
71 1ugn_A LIR1, leukocyte immunog 99.5 5.9E-14 2E-18 96.2 7.6 114 8-129 16-181 (198)
72 2p1y_A Bispecific alpha/beta T 99.5 3.2E-13 1.1E-17 94.6 11.5 118 8-128 12-222 (238)
73 1oll_A NK receptor; immune sys 99.5 1.2E-13 4.1E-18 94.1 8.9 113 8-128 15-172 (188)
74 2ghw_B Anti-SARS SCFV antibody 99.5 2.5E-13 8.5E-18 95.8 10.4 120 8-128 14-228 (247)
75 3esu_F Antibody 14B7* light ch 99.5 2.7E-13 9.4E-18 95.7 10.6 69 8-79 16-95 (250)
76 4fqp_A Poliovirus receptor; im 99.5 4.1E-13 1.4E-17 97.7 11.9 123 12-137 133-305 (313)
77 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.5 9.4E-14 3.2E-18 98.9 8.3 130 8-138 15-250 (256)
78 3ux9_B SCFV antibody; five hel 99.5 2.3E-13 7.9E-18 96.5 10.1 69 8-79 14-95 (256)
79 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 1.9E-13 6.6E-18 95.0 9.5 120 8-129 12-211 (222)
80 3mj8_L Stimulatory hamster ant 99.5 7E-14 2.4E-18 96.4 6.9 119 8-129 12-201 (213)
81 3kld_A Contactin 4, axcam, BIG 99.5 1.6E-14 5.6E-19 108.3 4.0 113 9-129 21-181 (384)
82 3ejj_X Macrophage colony-stimu 99.5 1.3E-13 4.3E-18 98.9 8.2 113 9-129 102-269 (289)
83 3qs7_E FL cytokine receptor; i 99.5 1.3E-13 4.6E-18 105.2 8.3 121 9-129 240-402 (423)
84 1lk3_L 9D7 light chain; antige 99.5 2.3E-13 8E-18 93.7 8.8 119 8-129 12-200 (210)
85 1vca_A VCAM-D1,2, human vascul 99.5 4.9E-13 1.7E-17 92.4 10.1 112 9-129 14-178 (202)
86 1qz1_A Neural cell adhesion mo 99.5 1E-12 3.5E-17 94.2 12.0 119 8-129 14-179 (291)
87 1itb_B Type 1 interleukin-1 re 99.5 4.2E-13 1.5E-17 97.5 10.0 111 10-129 117-302 (315)
88 2znx_A SCFV; fluorotryptohpan, 99.5 5.1E-13 1.7E-17 94.3 10.0 129 7-138 12-237 (242)
89 3auv_A SC-DSFV derived from th 99.4 5E-13 1.7E-17 96.2 9.8 117 8-127 24-235 (276)
90 2yd9_A Receptor-type tyrosine- 99.4 3.5E-13 1.2E-17 97.6 9.0 116 9-129 19-188 (304)
91 3rjd_A High affinity immunoglo 99.4 8E-13 2.7E-17 93.3 10.6 107 9-129 95-247 (262)
92 4dkd_C Macrophage colony-stimu 99.4 9E-14 3.1E-18 99.8 5.7 112 9-129 102-269 (292)
93 3uzq_A Anti-dengue MAB 4E11; d 99.4 4.6E-13 1.6E-17 95.0 9.3 130 8-138 13-246 (253)
94 3s96_B 3B5H10 FAB light chain; 99.4 1.4E-13 4.6E-18 95.2 6.4 119 8-129 12-208 (218)
95 3umt_A SCFV heavy chain and li 99.4 3.6E-13 1.2E-17 95.7 8.5 130 8-138 14-247 (256)
96 1f3r_B FV antibody fragment; I 99.4 8.1E-13 2.8E-17 94.1 10.4 130 8-138 12-247 (257)
97 2y23_A Myomesin; structural pr 99.4 9.2E-13 3.2E-17 95.2 10.8 116 10-129 121-300 (312)
98 2ocw_A Polymeric-immunoglobuli 99.4 1.4E-12 4.8E-17 102.2 12.5 121 8-129 12-209 (585)
99 2ocw_A Polymeric-immunoglobuli 99.4 2E-12 6.7E-17 101.3 13.2 119 9-129 344-533 (585)
100 3b5h_A Cervical EMMPRIN, HAB18 99.4 1.2E-12 4.1E-17 88.2 10.4 109 8-129 10-171 (184)
101 3rjd_A High affinity immunoglo 99.4 4.3E-13 1.5E-17 94.7 8.6 106 8-129 13-155 (262)
102 4fom_A Poliovirus receptor-rel 99.4 8.3E-13 2.9E-17 95.7 10.1 119 9-129 12-196 (308)
103 1e07_A Carcinoembryonic antige 99.4 1.7E-12 5.7E-17 103.0 12.7 112 9-129 480-628 (642)
104 1nkr_A P58-CL42 KIR; inhibitor 99.4 1.5E-12 5.2E-17 89.4 10.9 112 8-127 19-183 (201)
105 2ec8_A MAST/stem cell growth f 99.4 1.2E-12 4E-17 101.6 11.5 120 9-129 224-399 (524)
106 2c1o_A IGK-C protein; FAB frag 99.4 3.7E-13 1.3E-17 95.3 7.4 119 8-129 50-243 (254)
107 3mtr_A N-CAM-1, NCAM-1, neural 99.4 6.6E-12 2.3E-16 86.8 13.6 117 9-129 31-197 (215)
108 3gkz_A Anti-methamphetamine si 99.4 9.8E-13 3.4E-17 93.4 9.5 130 8-138 20-251 (257)
109 2dru_A Chimera of CD48 antigen 99.4 7.9E-13 2.7E-17 89.9 8.6 115 9-130 12-170 (180)
110 3juy_B 3B3 single chain varian 99.4 6.3E-13 2.2E-17 94.5 8.4 73 7-80 17-107 (256)
111 3o4o_C Interleukin-1 receptor 99.4 3E-13 1E-17 99.3 6.9 114 9-129 31-204 (339)
112 2wim_A N-CAM 2, NCAM2, neural 99.4 4E-12 1.4E-16 91.1 12.6 116 8-129 16-177 (291)
113 1nqb_A Single-chain antibody f 99.4 8.1E-13 2.8E-17 94.3 9.0 130 8-138 12-235 (256)
114 1moe_A Anti-CEA MAB T84.66; an 99.4 1.4E-12 4.9E-17 91.4 10.1 116 8-126 13-219 (240)
115 1pz5_B Heavy chain of FAB (SYA 99.4 8.3E-13 2.8E-17 91.7 8.6 120 8-129 12-209 (220)
116 3u83_A Poliovirus receptor-rel 99.4 1.6E-12 5.6E-17 94.9 10.6 110 12-129 151-308 (331)
117 3vh8_G Killer cell immunoglobu 99.4 3.2E-13 1.1E-17 98.5 6.7 110 9-129 36-198 (316)
118 1dr9_A B7-1 (CD80), T lymphocy 99.4 7E-13 2.4E-17 90.6 7.8 120 8-131 6-191 (201)
119 1hnf_A CD2; T lymphocyte adhes 99.4 4.3E-13 1.5E-17 91.7 6.7 113 10-129 13-169 (182)
120 1c1e_H Catalytic antibody 1E9 99.4 2.7E-12 9.1E-17 89.0 10.8 120 8-129 12-208 (219)
121 3d9a_H Heavy chain of hyhel10 99.4 2.3E-12 7.8E-17 88.8 10.3 121 7-129 11-202 (210)
122 1mju_H Immunoglobulin MS6-12; 99.4 8.9E-13 3E-17 92.4 8.3 120 8-129 12-205 (227)
123 3oq3_B IFN-alpha/beta binding 99.4 2.2E-12 7.6E-17 94.7 10.7 112 9-129 141-318 (329)
124 1p6f_A NKP46, natural cytotoxi 99.4 3E-12 1E-16 91.0 10.9 113 8-128 18-175 (242)
125 1sy6_A T-cell surface glycopro 99.4 3.4E-13 1.2E-17 93.3 5.8 105 9-129 16-191 (204)
126 1q0x_L FAB 9B1, light chain; a 99.4 5.7E-13 2E-17 91.8 6.9 119 8-129 12-203 (212)
127 1e07_A Carcinoembryonic antige 99.4 5.1E-12 1.7E-16 100.2 13.0 111 10-129 125-272 (642)
128 2o26_X MAST/stem cell growth f 99.4 1.3E-12 4.4E-17 93.9 8.7 110 10-129 105-276 (290)
129 3pv7_A B7-H6, IG-like domain-c 99.4 3.8E-13 1.3E-17 94.9 5.7 121 9-129 16-212 (248)
130 1svz_A Immunoglobulin;, single 99.4 3.4E-12 1.2E-16 90.0 10.5 117 8-127 13-228 (247)
131 2ifg_A High affinity nerve gro 99.4 1.6E-13 5.5E-18 101.7 3.8 114 8-129 170-333 (347)
132 1cs6_A Axonin-1; neural cell a 99.4 2E-13 6.7E-18 101.7 4.1 113 9-129 20-182 (382)
133 1ccz_A Protein (CD58); LFA-3, 99.4 1.9E-13 6.3E-18 92.4 3.3 116 9-130 8-160 (171)
134 3eow_R Poliovirus receptor; im 99.4 1.2E-12 4.1E-17 90.8 7.5 122 8-129 11-200 (221)
135 2rcj_C Light chain; immunoglob 99.4 3.2E-12 1.1E-16 99.1 10.8 120 7-129 11-202 (523)
136 3vh8_G Killer cell immunoglobu 99.4 4E-12 1.4E-16 92.7 10.6 113 9-129 131-296 (316)
137 3r06_A Anti-mouse CD3epsilon a 99.4 1.6E-12 5.6E-17 89.5 8.1 119 8-129 13-201 (213)
138 1nfd_E H57 FAB; complex (immun 99.4 2.7E-13 9.4E-18 93.4 4.1 119 8-129 11-200 (212)
139 3dmk_A DOWN syndrome cell adhe 99.4 6.5E-12 2.2E-16 102.0 12.8 120 9-133 632-801 (816)
140 2fbj_H IGA-kappa J539 FAB (hea 99.4 6.7E-12 2.3E-16 87.4 11.1 121 8-129 12-209 (220)
141 2wng_A Tyrosine-protein phosph 99.4 5.4E-12 1.8E-16 92.3 11.0 122 8-129 15-204 (327)
142 2v5m_A Dscam; neurobiology SPL 99.4 2.1E-12 7.3E-17 96.1 8.9 114 10-129 117-294 (388)
143 3nl4_L Antigen binding fragmen 99.4 1E-12 3.5E-17 90.5 6.7 115 8-125 13-198 (213)
144 3sob_L Antibody light chain; b 99.4 8.9E-13 3E-17 92.0 6.3 119 8-129 36-224 (237)
145 3u83_A Poliovirus receptor-rel 99.4 2.2E-12 7.4E-17 94.2 8.6 119 9-129 27-218 (331)
146 3p3y_A Neurofascin; IG domains 99.4 1.1E-12 3.7E-17 98.0 7.1 115 9-129 30-196 (404)
147 1wio_A CD4, T-cell surface gly 99.4 4E-13 1.4E-17 99.8 4.7 121 9-129 189-352 (363)
148 3o4o_C Interleukin-1 receptor 99.4 6.5E-13 2.2E-17 97.5 5.7 114 9-129 133-323 (339)
149 3fku_X Neutralizing antibody F 99.4 2.7E-12 9.2E-17 92.7 8.7 120 8-128 12-234 (280)
150 3m8o_H Immunoglobulin A1 heavy 99.4 1.2E-11 4E-16 85.9 11.6 121 8-129 12-211 (221)
151 2pet_A Lutheran blood group gl 99.4 4.9E-12 1.7E-16 87.8 9.7 67 8-80 12-99 (231)
152 1b6u_A KIR2DL3, P58 killer cel 99.4 7.6E-12 2.6E-16 89.8 10.8 112 8-127 18-182 (257)
153 3bae_H WO2 IGG2A FAB fragment 99.4 6E-12 2.1E-16 88.1 10.1 121 7-129 11-214 (228)
154 2y25_A Myomesin; structural pr 99.3 1.2E-12 4E-17 94.8 6.4 113 9-129 19-188 (317)
155 1qok_A MFE-23 recombinant anti 99.3 5.4E-12 1.9E-16 91.1 9.7 128 8-136 38-268 (282)
156 1op3_H FAB 2G12, heavy chain; 99.3 6E-12 2.1E-16 87.9 9.4 120 8-129 12-213 (225)
157 4dep_C Interleukin-1 receptor 99.3 5.2E-12 1.8E-16 93.0 8.9 113 9-128 20-200 (349)
158 1ry7_B FGFR-3, fibroblast grow 99.3 3E-13 1E-17 99.0 2.3 113 7-129 19-204 (334)
159 3bkj_L WO2 IGG2A FAB fragment 99.3 2.2E-12 7.4E-17 91.5 6.5 119 8-129 46-239 (252)
160 3dmk_A DOWN syndrome cell adhe 99.3 6.3E-12 2.2E-16 102.1 10.1 111 10-129 540-701 (816)
161 4dep_C Interleukin-1 receptor 99.3 1.7E-12 5.8E-17 95.6 5.9 111 9-129 133-321 (349)
162 2j6e_L IGM, FAB light chain; a 99.3 3.8E-12 1.3E-16 88.8 7.4 119 8-129 31-223 (234)
163 3omz_A Human vdelta1 gamma del 99.3 3.3E-12 1.1E-16 90.9 7.2 71 8-79 14-100 (259)
164 2gjj_A A21 single-chain antibo 99.3 3E-11 1E-15 86.5 11.9 70 7-79 16-102 (264)
165 3nl4_H Antigen binding fragmen 99.3 2.4E-11 8.3E-16 84.0 10.8 118 8-129 11-202 (215)
166 4dzb_B Vbeta2 (MAIT T cell rec 99.3 1.4E-11 4.7E-16 86.8 9.6 70 7-78 12-97 (246)
167 3bqu_C 3H6 FAB light chain; be 99.3 3E-13 1E-17 94.5 1.0 120 7-129 34-223 (233)
168 3tv3_L PGT128 light chain, IG 99.3 1.9E-12 6.6E-17 89.1 5.0 117 8-129 12-199 (211)
169 2rcj_C Light chain; immunoglob 99.3 2.2E-11 7.4E-16 94.4 10.9 117 11-129 129-304 (523)
170 2wqr_A IG epsilon chain C regi 99.3 3.7E-12 1.3E-16 93.3 6.0 116 7-130 124-309 (323)
171 1za6_B IGG heavy chain; immuno 99.3 1E-11 3.5E-16 91.8 8.3 121 7-129 11-205 (344)
172 2xzc_L FAB A.17 light chain; i 99.3 1.2E-11 4.1E-16 85.4 8.1 119 8-129 12-203 (216)
173 1qgc_4 Protein (immunoglobulin 99.3 9.9E-12 3.4E-16 94.0 8.3 115 11-126 131-318 (438)
174 1dee_B IGM RF 2A2; FAB-IBP com 99.3 4.7E-11 1.6E-15 83.3 11.1 122 7-129 11-215 (223)
175 4fqp_A Poliovirus receptor; im 99.3 1.7E-11 5.8E-16 89.1 9.1 122 8-129 12-201 (313)
176 1bih_A Hemolin; insect immunit 99.3 1.5E-11 5.2E-16 91.6 8.9 114 9-129 19-188 (395)
177 3oq3_B IFN-alpha/beta binding 99.3 6.5E-12 2.2E-16 92.2 6.7 110 9-129 42-208 (329)
178 1qgc_4 Protein (immunoglobulin 99.3 6E-12 2.1E-16 95.2 6.7 119 8-129 13-205 (438)
179 2y23_A Myomesin; structural pr 99.3 3.3E-11 1.1E-15 87.0 10.1 114 10-129 15-190 (312)
180 2gki_A Nuclease; anti-DNA anti 99.3 1.2E-11 4.1E-16 89.7 7.8 72 8-80 34-123 (291)
181 1x9q_A SCFV, 4M5.3 anti-fluore 99.3 2.1E-11 7.3E-16 87.2 8.7 70 7-79 26-111 (268)
182 1igt_B IGG2A intact antibody - 99.3 4.3E-11 1.5E-15 91.1 10.9 121 7-129 11-207 (444)
183 1itb_B Type 1 interleukin-1 re 99.3 3.6E-12 1.2E-16 92.5 4.6 116 7-129 16-187 (315)
184 2wng_A Tyrosine-protein phosph 99.3 2.5E-11 8.4E-16 88.8 8.8 119 9-129 130-307 (327)
185 2nzi_A Titin; IG-domain, FNIII 99.3 1.2E-10 4.1E-15 84.0 12.3 114 10-129 118-278 (305)
186 2xqy_G A13-D6.3 monoclonal ant 99.2 3.6E-11 1.2E-15 86.2 9.3 121 7-129 17-213 (261)
187 2ec8_A MAST/stem cell growth f 99.2 1.8E-11 6.3E-16 94.8 8.3 122 9-138 127-311 (524)
188 3q5y_A TCR N15 beta; IG, T cel 99.2 2.3E-11 7.9E-16 85.4 7.9 68 8-78 14-95 (240)
189 3v2a_R Vascular endothelial gr 99.2 7.2E-13 2.5E-17 106.6 0.0 119 9-129 562-744 (772)
190 3liz_H 4C3 monoclonal antibody 99.2 2.6E-11 9E-16 86.2 7.5 120 8-129 12-208 (253)
191 4ei6_B Vbeta16 XV19 type II na 99.2 1.4E-10 4.7E-15 81.5 10.5 68 8-78 14-96 (245)
192 3qs9_E FL cytokine receptor; i 99.2 2.4E-11 8.1E-16 95.2 7.2 63 8-80 338-400 (527)
193 1hzh_H IGG, immunoglobulin hea 99.2 7E-11 2.4E-15 90.3 9.4 121 7-129 11-217 (457)
194 3pl6_D MBP peptide / T-cell re 99.2 9.3E-11 3.2E-15 83.6 9.4 69 8-79 38-121 (268)
195 1dn0_B IGM-kappa cold agglutin 99.2 5.1E-10 1.7E-14 78.6 13.0 122 7-129 11-215 (232)
196 3knb_A Titin; IG-like, titin, 99.2 5.2E-11 1.8E-15 73.5 6.9 69 8-80 17-85 (100)
197 3nfj_J T cell receptor beta ch 99.2 4.7E-11 1.6E-15 84.0 7.5 70 8-79 13-95 (245)
198 1igy_B IGG1 intact antibody MA 99.2 4.3E-11 1.5E-15 90.9 7.7 121 7-129 10-203 (434)
199 3tv3_H PGT128 heavy chain, IG 99.2 1.2E-10 3.9E-15 82.2 9.2 121 7-129 11-225 (239)
200 3o3u_N Maltose-binding peripla 99.2 7.9E-11 2.7E-15 92.4 8.5 65 9-79 379-453 (581)
201 1c5d_H Monoclonal antibody aga 99.2 1.7E-10 5.7E-15 80.0 9.1 72 7-79 11-99 (215)
202 3ejj_X Macrophage colony-stimu 99.2 1.5E-10 5.1E-15 82.8 9.0 113 8-135 16-180 (289)
203 3n9g_H FAB fragment of MAB CR4 99.2 1.9E-10 6.3E-15 80.6 9.0 120 8-129 12-213 (230)
204 3qs7_E FL cytokine receptor; i 99.2 7.6E-11 2.6E-15 90.0 7.6 115 8-129 60-215 (423)
205 3mjg_X Beta-type platelet-deri 99.1 2.9E-10 9.9E-15 81.4 9.7 105 8-129 107-266 (289)
206 2jll_A NCAM2, neural cell adhe 99.1 7.7E-10 2.6E-14 82.3 12.1 117 9-129 113-276 (389)
207 3qhz_H Human monoclonal antibo 99.1 3.3E-10 1.1E-14 79.3 9.4 88 40-129 66-217 (232)
208 3mlr_H Human monoclonal anti-H 99.1 1.1E-10 3.8E-15 81.7 6.9 120 8-129 12-214 (226)
209 4dkd_C Macrophage colony-stimu 99.1 6.3E-11 2.2E-15 84.8 5.6 107 8-129 16-168 (292)
210 3qib_D 2B4 beta chain; IG doma 99.1 2E-10 7E-15 82.0 8.1 69 8-79 39-122 (270)
211 1iga_A IGA1; immunoglobulin; N 99.1 1.4E-09 4.6E-14 83.6 13.0 122 7-129 12-214 (475)
212 2wbj_D OB TCR; transmembrane, 99.1 6.5E-10 2.2E-14 79.9 10.4 70 8-79 36-121 (279)
213 1hxm_B Gamma-delta T-cell rece 99.1 1.7E-09 5.8E-14 76.2 12.2 73 7-80 12-102 (242)
214 3bn9_D E2 FAB heavy chain; ant 99.1 6.1E-11 2.1E-15 85.0 4.6 71 8-79 12-100 (257)
215 3u2s_H PG9 heavy chain; greek 99.1 2.4E-10 8.4E-15 81.2 7.6 71 8-79 11-99 (248)
216 3sob_H Antibody heavy chain, l 99.1 4.6E-10 1.6E-14 79.8 9.0 120 8-129 35-239 (256)
217 1z7z_I Intercellular adhesion 99.1 8.7E-10 3E-14 83.7 11.0 112 9-129 99-270 (450)
218 3knb_B Obscurin-like protein 1 99.1 1.5E-10 5E-15 72.4 5.6 66 9-80 26-91 (107)
219 2vol_A Murine IGG FC; FC, zinc 99.1 1.4E-10 4.6E-15 80.0 6.0 71 8-79 15-89 (207)
220 2rgs_A I, IG gamma-2B heavy ch 99.1 7.9E-11 2.7E-15 81.9 4.6 72 8-80 23-98 (218)
221 2o26_X MAST/stem cell growth f 99.1 2.6E-10 8.7E-15 81.9 7.4 104 9-129 25-170 (290)
222 2cqv_A MLCK, myosin light chai 99.1 8.6E-10 3E-14 69.1 8.4 67 8-80 19-85 (114)
223 1he7_A High affinity nerve gro 99.1 1E-09 3.4E-14 70.7 8.3 67 13-80 17-85 (126)
224 3v2a_R Vascular endothelial gr 99.1 3E-10 1E-14 91.3 7.1 121 9-129 237-405 (772)
225 3irg_A Titin; IG-like, titin, 99.0 7E-10 2.4E-14 67.4 6.9 69 8-80 17-85 (100)
226 2qsq_A Carcinoembryonic antige 99.0 8E-10 2.7E-14 69.7 7.0 34 40-79 60-93 (111)
227 1wwb_X Protein (brain derived 99.0 4E-10 1.4E-14 69.7 5.5 70 10-80 15-84 (103)
228 1wit_A Twitchin 18TH IGSF modu 99.0 1.5E-09 5.1E-14 65.5 8.0 65 8-80 14-80 (93)
229 3cx2_A Myosin-binding protein 99.0 8.7E-10 3E-14 68.6 6.8 72 8-79 16-93 (108)
230 1g1c_A Immunoglobulin-like dom 99.0 8.6E-10 2.9E-14 67.1 6.7 68 8-80 17-84 (99)
231 3caf_A Fibroblast growth facto 99.0 3.7E-10 1.3E-14 68.9 4.9 68 8-80 20-87 (100)
232 4gos_A V-SET domain-containing 99.0 1.6E-09 5.4E-14 69.5 7.6 72 8-79 17-105 (125)
233 1gxe_A Myosin binding protein 99.0 8E-10 2.7E-14 72.3 6.3 69 8-80 30-125 (139)
234 1u2h_A APEG-1, aortic preferen 99.0 8.1E-10 2.8E-14 67.2 5.9 68 8-80 17-84 (99)
235 3iu4_H CHP3 FAB heavy chain; a 99.0 9.8E-10 3.3E-14 78.8 6.8 120 8-129 12-212 (263)
236 3qp3_A Titin; I-SET IG-like, s 99.0 1.2E-09 4.3E-14 66.9 6.2 66 9-80 21-86 (103)
237 1igt_B IGG2A intact antibody - 99.0 6E-10 2E-14 84.7 5.7 71 8-79 252-326 (444)
238 2kdg_A Myotilin; immonoglobuli 99.0 1.6E-09 5.3E-14 66.0 6.5 68 8-80 17-84 (100)
239 2lu7_A Obscurin-like protein 1 99.0 5.8E-10 2E-14 66.8 4.4 64 8-78 8-71 (84)
240 4gjt_B Poliovirus receptor-rel 99.0 2.6E-09 9E-14 68.0 7.7 42 38-79 60-101 (123)
241 2dm2_A Palladin; beta-sandwich 99.0 2.7E-09 9.2E-14 66.3 7.6 69 8-80 20-88 (110)
242 2edj_A Roundabout homolog 2; K 99.0 7.5E-10 2.5E-14 67.6 4.9 64 9-80 21-84 (100)
243 3puc_A Titin; I-SET IG-like do 99.0 1.5E-09 5.2E-14 65.9 6.1 67 8-80 18-84 (99)
244 2eo9_A Roundabout homolog 1; b 99.0 1.1E-09 3.7E-14 69.0 5.4 65 8-80 20-84 (118)
245 1z7z_I Intercellular adhesion 99.0 8.8E-09 3E-13 78.2 11.5 112 9-129 201-351 (450)
246 2dav_A SLOW MYBP-C, myosin-bin 98.9 2.7E-09 9.4E-14 68.7 7.3 72 8-79 19-96 (126)
247 1i1c_A IGG2A, IG gamma-2A chai 98.9 5.8E-10 2E-14 78.9 4.6 71 8-79 29-103 (239)
248 2bk8_A Connectin, M1, titin he 98.9 1.7E-09 5.8E-14 65.7 6.0 66 8-79 13-79 (97)
249 3to4_D NKT vbeta2 (mouse varia 98.9 3.6E-09 1.2E-13 74.9 8.6 68 7-78 12-94 (253)
250 2oz4_A Intercellular adhesion 98.9 3.6E-09 1.2E-13 75.1 8.4 102 10-129 112-252 (265)
251 1bec_A 14.3.D T cell antigen r 98.9 2.4E-09 8.2E-14 75.2 7.3 70 8-80 11-94 (238)
252 2e7c_A Myosin-binding protein 98.9 2E-09 6.7E-14 67.8 6.2 66 8-80 36-101 (118)
253 2kkq_A Myotilin; unknown funct 98.9 3.7E-09 1.3E-13 66.6 7.2 69 8-80 27-95 (116)
254 2ckn_A Basic fibroblast growth 98.9 3E-09 1E-13 64.5 6.6 61 8-79 21-81 (95)
255 2w59_A IGY FCU3-4; immunoglobu 98.9 3.9E-09 1.3E-13 74.0 8.0 72 7-79 24-98 (231)
256 1ypz_F T-cell receptor gamma c 98.9 5.2E-09 1.8E-13 73.3 8.2 72 7-79 12-100 (230)
257 1nct_A Titin; cell adhesion, g 98.9 8.2E-10 2.8E-14 68.6 3.5 66 8-79 26-91 (106)
258 3irg_B Obscurin-like protein 1 98.9 2.4E-09 8.2E-14 66.0 5.6 66 8-79 25-90 (107)
259 3kvq_A Vascular endothelial gr 98.9 1.9E-09 6.6E-14 66.5 5.1 64 8-79 22-85 (108)
260 3qr2_A Basigin; CD147, EMMPRIN 98.9 2.7E-09 9.2E-14 68.9 5.9 74 8-81 33-113 (137)
261 2wqr_A IG epsilon chain C regi 98.9 3.1E-10 1.1E-14 83.0 1.5 116 12-129 25-202 (323)
262 2yr3_A Myosin light chain kina 98.9 1.9E-09 6.4E-14 65.7 4.8 64 8-80 23-86 (99)
263 1pko_A Myelin oligodendrocyte 98.9 5.8E-09 2E-13 67.5 7.4 72 8-79 18-106 (139)
264 1zvo_C Myeloma immunoglobulin 98.9 1.4E-08 4.6E-13 79.1 10.7 72 7-79 11-101 (512)
265 2edn_A Myosin-binding protein 98.9 3E-09 1E-13 67.7 5.4 72 8-79 24-101 (118)
266 2lvc_A Obscurin-like protein 1 98.9 2.7E-09 9.1E-14 64.8 4.9 63 9-78 19-81 (91)
267 2cr3_A Basic fibroblast growth 98.9 5.9E-09 2E-13 63.7 6.6 62 8-80 15-76 (99)
268 1jhl_L IGG1-kappa D11.15 FV (l 98.9 7.1E-09 2.4E-13 64.3 6.9 70 7-79 12-92 (108)
269 1ncn_A T lymphocyte activation 98.9 5.1E-09 1.8E-13 65.1 6.2 67 9-80 7-91 (110)
270 1iga_A IGA1; immunoglobulin; N 98.9 3.1E-08 1E-12 76.1 11.7 117 10-129 140-333 (475)
271 2oz4_A Intercellular adhesion 98.9 2.3E-08 8E-13 70.9 10.2 109 9-129 16-167 (265)
272 2dm3_A KIAA0992 protein, palla 98.9 2.3E-09 8E-14 66.4 4.4 68 8-80 21-88 (110)
273 3bfo_A Mucosa-associated lymph 98.9 3.9E-09 1.3E-13 63.4 5.2 58 8-80 15-72 (91)
274 1h5b_A Murine T cell receptor 98.9 9.9E-09 3.4E-13 64.2 7.3 73 7-80 12-93 (113)
275 2dlt_A Myosin binding protein 98.9 3.6E-09 1.2E-13 65.4 5.1 66 8-80 20-85 (106)
276 1wwc_A Protein (NT-3 growth fa 98.8 1.1E-08 3.7E-13 64.4 7.3 66 13-80 22-87 (118)
277 3u1s_H FAB PGT145 heavy chain; 98.8 1.8E-08 6.3E-13 72.1 9.0 38 40-78 85-122 (267)
278 1igy_B IGG1 intact antibody MA 98.8 6.6E-10 2.3E-14 84.3 1.4 121 8-129 242-423 (434)
279 3m45_A Cell adhesion molecule 98.8 1.8E-08 6.2E-13 61.8 7.5 70 8-79 18-92 (108)
280 1gl4_B Basement membrane-speci 98.8 9.4E-09 3.2E-13 62.4 6.1 61 8-79 22-83 (98)
281 1fhg_A Telokin; immunoglobulin 98.8 1.4E-08 4.7E-13 67.0 7.1 68 8-80 53-120 (154)
282 3rbg_A Cytotoxic and regulator 98.8 1.1E-08 3.6E-13 65.2 6.3 70 8-79 13-87 (124)
283 1waa_A Titin; metal binding pr 98.8 1E-08 3.4E-13 62.3 5.6 64 9-79 18-81 (93)
284 2yd6_A PTPRD protein; hydrolas 98.8 1.4E-08 4.8E-13 69.7 7.0 68 10-80 122-189 (212)
285 1gsm_A Madcam-1, mucosal addre 98.8 9.2E-08 3.2E-12 66.7 11.1 61 8-80 19-81 (210)
286 2ptt_A CD48 antigen; CD244, CD 98.8 8E-09 2.7E-13 64.3 5.1 66 8-78 15-93 (110)
287 2yuz_A Myosin-binding protein 98.8 1.1E-08 3.7E-13 62.9 5.5 63 9-79 20-82 (100)
288 2e6p_A Obscurin-like protein 1 98.8 8.7E-09 3E-13 63.3 5.0 65 8-79 22-86 (104)
289 2aty_A Complement receptor chi 98.8 2.3E-08 7.7E-13 75.1 8.1 121 8-129 180-361 (376)
290 1qfw_M FV, antibody (anti beta 98.8 2E-08 6.9E-13 62.3 6.6 70 7-79 12-92 (108)
291 3r0n_A Poliovirus receptor-rel 98.8 1.6E-08 5.4E-13 64.5 6.1 72 8-79 14-114 (128)
292 2q20_A VK1 O18/O8 germline lig 98.8 1.8E-08 6.1E-13 62.7 6.2 70 7-79 14-94 (109)
293 1i8k_A Epidermal growth factor 98.8 1.7E-08 5.7E-13 62.6 5.9 70 7-79 12-92 (107)
294 2yuv_A Myosin-binding protein 98.8 2.7E-08 9.1E-13 60.7 6.7 63 8-77 20-82 (100)
295 2e7b_A Obscurin; IG-like domai 98.8 2.4E-08 8.3E-13 61.1 6.4 63 8-77 20-82 (103)
296 2ens_A Advanced glycosylation 98.7 4.1E-09 1.4E-13 63.9 2.8 57 8-79 22-78 (96)
297 2k1m_A Myosin-binding protein 98.7 3.6E-08 1.2E-12 59.6 7.0 63 8-77 20-82 (95)
298 3rbs_A Myomesin-1; immunoglobu 98.7 1.3E-08 4.5E-13 70.3 5.6 62 11-80 131-193 (207)
299 3q0h_A T cell immunoreceptor w 98.7 1.1E-08 3.7E-13 64.7 4.6 66 8-79 15-92 (117)
300 1mqk_L Antibody 7E2 FV fragmen 98.7 2E-08 6.9E-13 63.7 5.8 70 7-79 12-92 (120)
301 2id5_A Lingo-1, leucine rich r 98.7 7.2E-09 2.5E-13 79.6 4.4 67 8-80 397-463 (477)
302 3s35_X Vascular endothelial gr 98.7 1.8E-08 6.3E-13 63.5 5.6 71 9-79 21-95 (122)
303 1pd6_A Cardiac MYBP-C;, myosin 98.7 3.1E-08 1.1E-12 61.3 6.5 65 8-78 28-92 (104)
304 2eny_A Obscurin; beta-sandwich 98.7 1.3E-08 4.4E-13 63.0 4.6 65 8-78 20-85 (104)
305 1eaj_A Coxsackie virus and ade 98.7 1.5E-08 5E-13 63.7 5.0 71 9-79 18-110 (126)
306 3b5h_A Cervical EMMPRIN, HAB18 98.7 6.5E-08 2.2E-12 64.7 8.5 70 8-80 95-169 (184)
307 2edo_A CD48 antigen; beta-sand 98.7 1.5E-08 5.2E-13 64.4 5.0 36 39-79 59-94 (121)
308 1l6x_A Immunoglobulin gamma-1 98.7 8.9E-09 3E-13 70.8 4.1 64 9-79 16-89 (207)
309 1oga_E TRBC1, T-cell receptor 98.7 1.6E-07 5.4E-12 66.4 10.5 69 8-79 15-97 (252)
310 2v44_A NCAM2, neural cell adhe 98.7 2E-08 6.8E-13 67.5 5.6 65 9-80 109-173 (189)
311 2edk_A Myosin-binding protein 98.7 9.7E-09 3.3E-13 62.8 3.6 68 8-79 20-88 (101)
312 1x44_A Myosin-binding protein 98.7 2.9E-08 9.8E-13 60.9 5.6 66 8-78 19-84 (103)
313 2e27_L Anti-ciguatoxin antibod 98.7 2.9E-08 1E-12 62.9 5.8 70 7-79 14-94 (119)
314 3so5_A LIG-3, leucine-rich rep 98.7 4.6E-08 1.6E-12 60.0 6.4 73 8-80 22-98 (112)
315 1za6_B IGG heavy chain; immuno 98.7 2.2E-08 7.4E-13 73.8 5.5 62 9-79 133-202 (344)
316 1epf_A NCAM, protein (neural c 98.7 3.8E-08 1.3E-12 66.1 6.0 65 9-80 113-177 (191)
317 1xt5_A Variable region-contain 98.7 2.6E-08 9.1E-13 63.8 5.0 69 8-80 16-114 (135)
318 2edf_A Obscurin; beta-sandwich 98.7 2.1E-08 7.2E-13 61.4 4.4 65 8-79 20-84 (103)
319 2wv3_A Neuroplastin; igcam, me 98.7 9.6E-08 3.3E-12 64.3 7.9 69 8-79 104-175 (190)
320 2edh_A Obscurin; structural ge 98.7 7.9E-08 2.7E-12 59.8 6.9 61 9-77 32-92 (113)
321 1i3g_L Antibody FV fragment; a 98.7 4.3E-08 1.5E-12 61.2 5.5 70 7-79 15-95 (111)
322 2dm7_A KIAA1556 protein; beta- 98.7 6.4E-08 2.2E-12 59.7 6.2 63 8-78 20-82 (108)
323 1j05_L T84.66 antibody, anti-C 98.6 6.1E-08 2.1E-12 60.4 6.1 70 7-79 12-96 (111)
324 3udw_C Poliovirus receptor; PV 98.6 6.5E-08 2.2E-12 60.1 6.2 71 8-79 12-100 (118)
325 2fbo_J V1V2;, variable region- 98.6 2E-08 7E-13 70.1 4.1 64 10-79 150-234 (250)
326 4hwu_A Fibroblast growth facto 98.6 5.4E-08 1.8E-12 58.7 5.3 59 9-79 14-72 (95)
327 2v9t_A Roundabout homolog 1; s 98.6 3.8E-08 1.3E-12 61.6 4.7 67 8-80 21-94 (117)
328 1pew_A JTO2, A lambda-6 type i 98.6 8.8E-08 3E-12 59.5 6.3 72 7-79 11-93 (109)
329 2ywz_A NEW antigen receptor va 98.6 1.9E-07 6.6E-12 58.2 7.9 72 7-79 11-87 (111)
330 3mjg_X Beta-type platelet-deri 98.6 2.1E-07 7.1E-12 66.4 9.1 72 8-80 193-264 (289)
331 4fa8_A Secreted protein BARF1; 98.6 4E-08 1.4E-12 67.9 5.1 66 9-80 119-188 (203)
332 1nko_A Sialic acid binding IG- 98.6 8.1E-08 2.8E-12 61.6 6.3 71 8-79 18-109 (132)
333 2cr6_A KIAA1556 protein, obscu 98.6 3.1E-08 1.1E-12 62.1 4.0 64 9-77 26-89 (115)
334 4f9p_D 103.2 anti-BTN3A1 antib 98.6 2.3E-07 7.8E-12 65.8 8.7 61 16-77 33-98 (254)
335 2eo1_A OBSCN protein, cDNA FLJ 98.6 3.3E-08 1.1E-12 60.4 4.0 64 8-78 23-86 (102)
336 2cry_A KIN of IRRE-like protei 98.6 9.2E-09 3.2E-13 65.1 1.4 72 8-80 25-99 (122)
337 1u3h_A T-cell receptor alpha-c 98.0 5.1E-09 1.8E-13 65.3 0.0 73 6-79 9-92 (110)
338 1eeq_A Kappa-4 immunoglobulin 98.6 8.6E-08 2.9E-12 60.0 5.6 70 7-79 12-98 (114)
339 2xot_A Amphoterin-induced prot 98.6 9.1E-08 3.1E-12 71.3 6.7 65 8-80 258-323 (361)
340 2dku_A KIAA1556 protein; beta- 98.6 1.2E-07 4.1E-12 58.0 6.2 63 8-77 20-82 (103)
341 2oyp_A Hepatitis A virus cellu 98.6 5.9E-08 2E-12 59.7 4.7 71 8-79 6-93 (109)
342 2coq_A NEW antigen receptor va 98.6 2.1E-07 7.3E-12 57.7 7.3 72 7-79 11-87 (108)
343 3noi_A Natural cytotoxicity tr 98.6 7.1E-08 2.4E-12 61.0 5.2 72 8-79 19-102 (120)
344 1kxv_C Camelid VHH domain CAB1 98.6 2E-07 6.9E-12 59.0 7.3 73 7-80 11-100 (121)
345 2d3v_A Leukocyte immunoglobuli 98.6 1E-07 3.4E-12 64.8 6.1 69 7-80 110-178 (196)
346 2qhl_A Novel immune-type recep 98.6 1.1E-07 3.8E-12 59.3 5.6 69 8-79 11-97 (111)
347 2cpc_A KIAA0657 protein; immun 98.6 1.1E-07 3.9E-12 59.0 5.6 64 9-79 26-89 (113)
348 2pnd_A V-SET and immunoglobuli 98.6 8.5E-08 2.9E-12 60.5 5.1 40 38-79 60-99 (119)
349 3moq_A NEW antigen receptor va 98.6 3.4E-07 1.2E-11 58.7 7.9 74 7-81 11-89 (126)
350 1dlf_L Anti-dansyl immunoglobu 98.6 1.8E-07 6.2E-12 58.4 6.4 70 7-79 12-97 (113)
351 2j8h_A Titin, connectin; cardi 98.5 1.3E-07 4.3E-12 63.8 5.9 66 9-80 117-183 (197)
352 2r15_A Myomesin-1; sarcomeric 98.5 3.2E-07 1.1E-11 62.4 8.0 67 9-80 130-196 (212)
353 2xt1_B Camelid VHH 9; viral pr 98.5 2.3E-07 7.9E-12 58.9 6.7 71 7-78 13-101 (121)
354 2v5t_A NCAM2, N-CAM 2, neural 98.5 1E-07 3.4E-12 63.7 5.3 64 9-80 111-174 (189)
355 1ow0_A IG alpha-1 chain C regi 98.5 3.8E-08 1.3E-12 68.0 3.3 71 6-79 14-87 (214)
356 1hzh_H IGG, immunoglobulin hea 98.5 9E-08 3.1E-12 73.0 5.6 64 9-79 262-335 (457)
357 2otu_A FV light chain variable 98.5 1.6E-07 5.5E-12 58.9 5.9 70 7-79 12-97 (115)
358 1f97_A Junction adhesion molec 98.5 1.7E-07 5.8E-12 63.6 6.4 67 9-80 117-191 (212)
359 2yd1_A Tyrosine-protein phosph 98.5 1.2E-07 4E-12 65.0 5.6 62 10-80 124-185 (212)
360 3r08_E T-cell surface glycopro 98.5 8.9E-09 3E-13 61.4 -0.2 56 6-78 9-65 (82)
361 1neu_A Myelin P0 protein; stru 98.5 9.3E-08 3.2E-12 60.2 4.6 39 40-79 64-102 (124)
362 1fo0_A Protein (BM3.3 T cell r 98.5 1.3E-07 4.5E-12 59.4 5.2 72 7-79 11-95 (116)
363 4ffy_L DENV1-E111 single chain 98.5 1.5E-07 5.3E-12 60.0 5.6 70 7-79 12-96 (126)
364 3r4d_A CEA-related cell adhesi 98.5 2.2E-07 7.5E-12 63.1 6.6 64 8-80 122-185 (208)
365 3s97_C Contactin-1; carbonic a 98.5 1.7E-07 5.7E-12 63.1 5.9 61 10-80 127-187 (201)
366 2p1y_A Bispecific alpha/beta T 98.5 3.2E-07 1.1E-11 63.8 7.5 72 8-80 139-221 (238)
367 2jju_A Signal regulatory prote 98.5 1.5E-07 5.2E-12 60.1 5.3 74 7-80 14-96 (127)
368 2or8_A Hepatitis A virus cellu 98.5 9.1E-08 3.1E-12 59.7 4.1 71 8-79 9-94 (116)
369 2q87_A CMRF35-H antigen; all-b 98.5 2.2E-07 7.7E-12 57.6 5.9 72 7-79 7-89 (110)
370 1sq2_N Novel antigen receptor; 98.5 3.8E-07 1.3E-11 57.1 7.0 72 7-79 11-87 (113)
371 2v5y_A Receptor-type tyrosine- 98.5 6.3E-07 2.1E-11 72.4 10.0 115 12-129 92-247 (731)
372 1z9m_A GAPA225; nectin-like, I 98.5 1.7E-07 5.9E-12 61.0 5.3 70 8-79 50-124 (145)
373 2bnu_A TCR alpha chain, T-cell 98.5 2.8E-06 9.6E-11 58.5 11.7 118 7-126 11-140 (203)
374 3p2t_A Leukocyte immunoglobuli 98.5 2.6E-07 8.8E-12 62.6 6.3 67 9-81 112-178 (196)
375 1fo0_B Protein (BM3.3 T cell r 98.5 3.2E-07 1.1E-11 57.3 6.2 69 7-79 12-95 (112)
376 1mfa_H IGG1-lambda Se155-4 FAB 98.5 4.4E-07 1.5E-11 57.3 6.9 71 8-79 12-100 (120)
377 2a38_A Titin; Z1Z2, structural 98.5 2.1E-07 7.2E-12 62.4 5.7 66 9-80 116-181 (194)
378 4acp_A IG gamma-1 chain C regi 98.5 1.4E-07 4.9E-12 66.8 5.0 70 9-79 37-110 (240)
379 3khq_A B-cell antigen receptor 98.5 2.8E-07 9.6E-12 59.5 5.9 68 7-79 28-98 (133)
380 3zyj_A Leucine-rich repeat-con 98.5 2.6E-07 9E-12 70.4 6.7 65 9-80 354-419 (440)
381 1ugn_A LIR1, leukocyte immunog 98.5 4E-07 1.4E-11 61.7 7.0 68 9-81 113-180 (198)
382 1oaq_L Light chain; antibody, 98.5 2.3E-07 7.8E-12 58.6 5.4 70 7-79 11-94 (120)
383 2z35_A T-cell receptor alpha-c 98.5 2.4E-07 8E-12 57.8 5.3 71 7-78 11-92 (112)
384 1qfo_A Protein (sialoadhesin); 98.5 3.6E-07 1.2E-11 57.4 6.2 39 40-79 62-100 (119)
385 2ny1_B T-cell surface glycopro 98.5 5.5E-07 1.9E-11 60.2 7.5 55 9-79 110-164 (184)
386 3mj6_A Junctional adhesion mol 98.5 2E-07 6.7E-12 65.8 5.5 70 9-79 131-222 (268)
387 2iep_A Muscle-specific kinase 98.5 1.6E-07 5.6E-12 62.9 4.7 62 10-80 114-175 (192)
388 4f9l_D 20.1 anti-BTN3A1 antibo 98.5 1.2E-06 4.1E-11 62.3 9.3 21 57-77 70-90 (259)
389 2or7_A T-cell immunoglobulin a 98.5 7.3E-08 2.5E-12 60.3 2.7 37 41-78 58-94 (115)
390 3jz7_A MCAR, CAR, coxsackievir 98.5 2.5E-07 8.6E-12 62.7 5.6 63 9-80 134-198 (214)
391 2d9c_A Signal-regulatory prote 98.5 2E-07 6.9E-12 60.1 4.8 73 7-79 19-100 (136)
392 3ux9_B SCFV antibody; five hel 98.5 5.2E-07 1.8E-11 63.5 7.3 71 8-79 146-234 (256)
393 1zox_A CLM-1; IG-superfamily, 98.5 3.8E-07 1.3E-11 56.8 5.8 72 7-79 12-95 (113)
394 2pkd_A SLAM family member 5; s 98.5 6.7E-07 2.3E-11 56.0 7.0 59 14-79 29-93 (111)
395 2yc1_B Single chain antibody f 98.4 2.4E-07 8.2E-12 60.9 5.1 70 7-79 27-107 (146)
396 2yz1_A Tyrosine-protein phosph 98.4 1.9E-07 6.4E-12 58.8 4.4 74 7-80 18-100 (120)
397 2p45_B Antibody CAB-RN05; seMe 98.4 8.9E-07 3E-11 56.1 7.5 71 8-79 14-102 (123)
398 1zvo_C Myeloma immunoglobulin 98.4 3.2E-06 1.1E-10 65.7 12.0 70 10-80 311-383 (512)
399 3rrq_A Protein PD-1, programme 98.4 7.4E-07 2.5E-11 57.1 7.1 72 7-79 12-96 (129)
400 2i24_N NEW antigen receptor PB 98.4 5.2E-07 1.8E-11 57.4 6.3 72 7-79 11-87 (121)
401 2vr9_A Roundabout 1, ROBO; imm 98.4 3E-07 1E-11 62.9 5.6 66 9-80 121-192 (217)
402 2oi9_C V beta, T cell receptor 98.4 9.7E-07 3.3E-11 56.0 7.5 36 41-78 59-94 (121)
403 2vsd_A CHIR AB1; immune system 98.4 2.4E-07 8.3E-12 57.3 4.6 64 7-80 15-78 (105)
404 1n4x_H Immunoglobulin heavy ch 98.4 3.6E-07 1.2E-11 57.6 5.5 71 8-79 12-100 (120)
405 2va4_A NCAM2, N-CAM 2, neural 98.4 5.8E-07 2E-11 60.0 6.7 67 10-79 108-178 (192)
406 1xau_A B- and T-lymphocyte att 98.4 5.2E-07 1.8E-11 56.2 5.8 75 4-79 22-100 (122)
407 2yc1_A Single chain antibody f 98.4 5.8E-07 2E-11 56.4 6.2 71 8-79 12-100 (117)
408 2ghw_B Anti-SARS SCFV antibody 98.4 8.5E-07 2.9E-11 62.0 7.7 69 8-79 147-226 (247)
409 3cx5_J Heavy chain (VH) of FV- 98.4 5E-07 1.7E-11 57.7 5.9 71 8-79 12-100 (127)
410 2wzp_D Camelid VHH5; baseplate 98.4 1.1E-06 3.6E-11 55.7 7.4 71 8-79 12-100 (123)
411 1lp9_E T-cell receptor alpha c 98.4 1.8E-06 6E-11 59.2 9.0 119 7-127 12-142 (194)
412 2atp_B T-cell surface glycopro 98.4 5.5E-07 1.9E-11 56.3 5.9 71 7-78 9-99 (115)
413 3bp6_A Programmed cell death p 98.4 8.7E-07 3E-11 55.7 6.9 72 7-79 10-94 (117)
414 2v9r_A Roundabout homolog 1; p 98.4 2.8E-07 9.5E-12 62.6 4.9 63 9-80 124-187 (212)
415 3bj9_1 Immunoglobulin IOTA cha 98.4 3.2E-07 1.1E-11 57.4 4.8 71 8-79 10-98 (116)
416 1nbq_A JAM, junctional adhesio 98.4 1.9E-07 6.4E-12 63.2 4.0 67 9-80 120-193 (209)
417 1a2y_B IGG1-kappa D1.3 FV (hea 98.4 5.7E-07 1.9E-11 56.4 5.9 70 8-78 12-98 (116)
418 4frw_A Poliovirus receptor-rel 98.4 5.2E-07 1.8E-11 61.0 6.0 66 10-80 132-197 (218)
419 1ypz_E T cell receptor delta, 98.4 6.8E-07 2.3E-11 61.5 6.6 73 7-80 12-93 (207)
420 3b9v_A Heavy chain variable do 98.4 6.4E-07 2.2E-11 56.5 6.0 71 8-79 12-100 (120)
421 1j05_H T84.66 antibody, anti-C 98.4 5.9E-07 2E-11 56.8 5.8 72 8-80 12-101 (121)
422 3umt_A SCFV heavy chain and li 98.4 5E-07 1.7E-11 63.7 6.0 69 8-79 150-229 (256)
423 3zyi_A Leucine-rich repeat-con 98.4 3.6E-07 1.2E-11 69.9 5.6 65 8-80 364-429 (452)
424 2h32_A Immunoglobulin IOTA cha 98.4 6.8E-07 2.3E-11 57.1 5.9 71 8-79 12-100 (126)
425 1sjv_A R9; camelids antibody, 98.4 9E-07 3.1E-11 55.3 6.4 71 8-79 12-99 (114)
426 2e6q_A Obscurin-like protein 1 98.4 1.2E-06 4.1E-11 55.1 6.9 64 9-77 21-91 (112)
427 3s35_X Vascular endothelial gr 98.4 6.3E-07 2.2E-11 56.3 5.6 36 105-140 74-114 (122)
428 3k0w_A Mucosa-associated lymph 98.4 4E-07 1.4E-11 62.7 4.9 56 9-79 131-186 (218)
429 3u6r_L Antibody 1:7 (light cha 98.4 5E-07 1.7E-11 59.2 5.0 69 7-78 11-90 (143)
430 2eys_A NKT15; natural killer T 98.4 5.3E-06 1.8E-10 57.5 10.5 121 7-129 14-146 (210)
431 1p4b_L Antibody variable light 98.4 3.5E-07 1.2E-11 59.3 4.1 70 7-79 16-99 (135)
432 1f3r_B FV antibody fragment; I 98.4 7.5E-07 2.6E-11 63.0 6.2 69 8-79 151-230 (257)
433 1yc7_A Anti-VSG immunoglobulin 98.4 1.4E-06 4.8E-11 55.5 6.8 72 7-79 11-99 (124)
434 2ifg_A High affinity nerve gro 98.4 9.4E-07 3.2E-11 65.2 6.8 70 10-80 260-331 (347)
435 3ojm_B Fibroblast growth facto 98.3 1.7E-06 5.7E-11 59.4 7.6 70 10-80 132-207 (231)
436 3uzq_A Anti-dengue MAB 4E11; d 98.3 1E-06 3.5E-11 62.0 6.5 69 8-79 145-228 (253)
437 3knb_A Titin; IG-like, titin, 98.3 6E-07 2.1E-11 55.0 4.7 25 105-129 63-87 (100)
438 3esu_F Antibody 14B7* light ch 98.3 9.4E-07 3.2E-11 61.9 6.2 70 9-79 144-231 (250)
439 3lcy_A Titin; A-BAND, IG tande 98.3 6.3E-07 2.2E-11 60.0 5.0 66 9-80 116-182 (197)
440 1tvd_A T cell receptor, ES204 98.3 1.1E-06 3.8E-11 54.9 5.8 71 8-79 12-97 (116)
441 3bik_B Programmed cell death p 98.3 1.7E-06 5.8E-11 55.8 6.8 72 7-79 20-104 (134)
442 2hp4_A T-cell surface glycopro 98.3 1.2E-06 4.2E-11 54.8 5.9 70 7-79 11-98 (114)
443 3rgv_A YAE62 TCR A chain; TCR, 98.3 1E-05 3.5E-10 55.8 11.0 116 8-129 12-139 (200)
444 3auv_A SC-DSFV derived from th 98.3 1.1E-06 3.6E-11 62.9 6.2 71 9-80 147-235 (276)
445 3knb_B Obscurin-like protein 1 98.3 5.7E-07 1.9E-11 55.8 4.2 25 105-129 69-93 (107)
446 1fnl_A Low affinity immunoglob 98.3 1.5E-06 5.1E-11 57.8 6.5 57 9-79 101-158 (175)
447 1uct_A Immunoglobulin alpha FC 98.3 1.6E-06 5.4E-11 60.2 6.8 62 9-80 118-179 (218)
448 2x1w_L Vascular endothelial gr 98.3 1.6E-06 5.4E-11 59.5 6.8 72 8-79 117-192 (213)
449 1moe_A Anti-CEA MAB T84.66; an 98.3 1.2E-06 4.2E-11 60.8 6.3 71 8-79 131-219 (240)
450 3bia_X T-cell immunoglobulin a 98.3 4.8E-07 1.6E-11 56.7 3.8 71 7-78 7-93 (116)
451 1kxt_B Immunoglobulin VHH frag 98.3 1.5E-06 5.3E-11 55.4 6.2 71 7-78 11-98 (127)
452 1xed_A Polymeric-immunoglobuli 98.3 1.1E-06 3.8E-11 55.4 5.4 37 41-78 59-95 (117)
453 1i3u_A Antibody VHH LAMA domai 98.3 1.4E-06 4.7E-11 55.6 5.9 72 7-79 11-105 (127)
454 3grw_A Fibroblast growth facto 98.3 2.3E-06 7.9E-11 59.2 7.6 70 9-79 127-203 (241)
455 1f2q_A High affinity immunoglo 98.3 1.4E-06 4.7E-11 58.0 6.1 57 9-79 98-155 (176)
456 2x1q_A Gelsolin nanobody; cont 98.3 1.2E-06 4.2E-11 55.9 5.6 71 8-79 12-100 (127)
457 2gi7_A GPVI protein; IG-like d 98.3 3.4E-06 1.2E-10 56.6 8.0 62 9-81 106-167 (184)
458 2ptt_B Natural killer cell rec 98.3 1.5E-06 5.3E-11 53.7 5.6 67 7-78 24-95 (112)
459 2c5d_C AXL oncogene, tyrosine- 98.3 3.1E-06 1.1E-10 56.9 7.8 59 9-80 119-178 (195)
460 4ei6_A Valpha1 XV19 type II na 98.3 9.6E-06 3.3E-10 56.3 10.3 121 7-129 13-144 (208)
461 3bdb_A Novel immune-type recep 98.3 7.5E-07 2.6E-11 57.7 4.5 34 43-79 64-97 (137)
462 3nn8_A Engineered SCFV, heavy 98.3 1.2E-06 4.1E-11 55.6 5.4 39 40-79 63-101 (122)
463 2nms_A CMRF35-like-molecule 1; 98.3 2.7E-06 9.1E-11 54.2 6.9 70 9-79 15-96 (124)
464 1oll_A NK receptor; immune sys 98.3 1.9E-06 6.5E-11 58.1 6.5 62 9-81 111-172 (188)
465 3juy_B 3B3 single chain varian 98.3 1.4E-06 4.6E-11 61.5 6.0 69 8-79 161-241 (256)
466 1nqb_A Single-chain antibody f 98.3 2.3E-06 8E-11 60.5 7.1 69 8-79 133-217 (256)
467 3ry4_A Low affinity immunoglob 98.3 2.4E-06 8.1E-11 56.2 6.6 57 10-80 99-156 (170)
468 3t0v_A Immunoglobulin variable 98.3 1.9E-06 6.6E-11 54.8 5.9 70 7-79 11-93 (123)
469 4i0k_A CD276 antigen; immunogl 98.3 2.1E-06 7.1E-11 58.8 6.5 69 9-80 123-192 (222)
470 3r8b_B G5-8, enterotoxin type 98.3 2.2E-06 7.6E-11 54.5 6.1 70 8-79 17-100 (125)
471 2edj_A Roundabout homolog 2; K 98.3 1.5E-06 5.1E-11 52.6 5.1 26 104-129 61-86 (100)
472 1svz_A Immunoglobulin;, single 98.3 1.8E-06 6.1E-11 60.4 6.1 71 8-79 139-227 (247)
473 2ol3_A BM3.3 T-cell receptor a 98.3 1.7E-06 5.7E-11 56.5 5.6 72 7-79 11-95 (142)
474 2znx_A SCFV; fluorotryptohpan, 98.3 2.5E-06 8.5E-11 59.7 6.8 70 8-78 134-220 (242)
475 2jjs_C Leukocyte surface antig 98.3 3.6E-07 1.2E-11 58.6 2.3 69 10-79 15-100 (127)
476 1rjc_A 1D2L19, camelid heavy c 98.3 3.1E-06 1E-10 54.9 6.7 71 8-79 12-100 (137)
477 2yr3_A Myosin light chain kina 98.3 2E-06 6.9E-11 51.9 5.5 25 105-129 64-88 (99)
478 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.2 3.7E-06 1.3E-10 59.3 7.7 69 9-80 150-232 (256)
479 3gkz_A Anti-methamphetamine si 98.2 2.1E-06 7.3E-11 60.4 6.4 69 8-79 153-233 (257)
480 3sgj_C Human FCG3A receptor; r 98.2 2.1E-06 7.2E-11 58.8 6.2 57 9-79 101-158 (204)
481 3qp3_A Titin; I-SET IG-like, s 98.2 1.4E-06 4.7E-11 53.0 4.7 25 105-129 64-88 (103)
482 4hwn_A FC receptor-like A; FCR 98.2 2.6E-06 8.8E-11 52.9 5.9 58 8-79 19-81 (108)
483 2cqv_A MLCK, myosin light chai 98.2 2.6E-06 8.8E-11 52.9 5.9 25 105-129 63-87 (114)
484 1jbj_A CD3 epsilon and gamma e 98.2 5E-07 1.7E-11 61.0 2.7 54 10-79 121-174 (186)
485 1hng_A CD2; T lymphocyte adhes 98.2 9.4E-07 3.2E-11 59.3 4.0 51 13-80 112-162 (176)
486 3kg5_A B-cell antigen receptor 98.2 3.2E-06 1.1E-10 54.7 6.4 69 7-79 29-101 (134)
487 2gjj_A A21 single-chain antibo 98.2 2.7E-06 9.4E-11 60.5 6.6 71 8-79 150-238 (264)
488 1zvy_A Immunoglobulin heavy ch 98.2 3E-06 1E-10 54.9 6.1 72 7-79 11-100 (136)
489 1sy6_A T-cell surface glycopro 98.2 6.5E-07 2.2E-11 61.5 3.1 60 11-79 128-188 (204)
490 3gsn_A RA14 TCR alpha chain (T 98.2 1.2E-05 4.2E-10 55.4 9.3 116 8-129 12-139 (199)
491 2zg1_A Sialic acid-binding IG- 98.2 5.7E-06 1.9E-10 56.3 7.4 59 10-80 137-199 (214)
492 3d9a_L Light chain of hyhel10 98.2 9.2E-07 3.1E-11 60.3 3.4 70 10-80 126-199 (213)
493 2gki_A Nuclease; anti-DNA anti 98.2 2.9E-06 9.9E-11 61.2 6.2 69 8-79 171-256 (291)
494 1hkf_A NKP44, NK cell activati 98.2 4.8E-06 1.6E-10 52.9 6.4 71 8-79 22-105 (122)
495 3k74_B Nanobody; immunoglobuli 98.2 5.6E-06 1.9E-10 51.8 6.7 38 40-78 60-97 (115)
496 2kdg_A Myotilin; immonoglobuli 98.2 2.9E-06 9.9E-11 51.1 5.2 24 106-129 63-86 (100)
497 3kvq_A Vascular endothelial gr 98.2 2E-06 6.9E-11 52.6 4.5 27 103-129 62-88 (108)
498 1g1c_A Immunoglobulin-like dom 98.2 2.3E-06 7.9E-11 51.5 4.6 24 106-129 63-86 (99)
499 1qok_A MFE-23 recombinant anti 98.2 3.3E-06 1.1E-10 60.5 6.1 68 8-79 174-252 (282)
500 1wit_A Twitchin 18TH IGSF modu 98.2 1.6E-06 5.3E-11 51.9 3.7 25 105-129 58-82 (93)
No 1
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.70 E-value=1.9e-16 Score=110.08 Aligned_cols=126 Identities=11% Similarity=0.038 Sum_probs=84.4
Q ss_pred HhhhccceeeEEee---cCCCccEEEEecCCCCc--------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFA---DDEDIPVYIWYDSYPTH--------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~---~g~p~p~~~w~k~~~~~--------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
++.++..+.+-|.. .+.|.|.+.|||++... ....+.+++.+... .+..+|.|.+++.+|
T Consensus 4 ta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 4 TAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRS---ANTFFLVVTAANISH 80 (203)
T ss_dssp EEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEE---TTEEEEEESSCCGGG
T ss_pred EEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEc---CCEEEEEEccCCHHH
Confidence 34567788888853 37899999999876321 11223344443221 346889999999999
Q ss_pred CEEEEEEEEEec----------C--CC--------CCCCCCcEEEEEEeE---------E-------------------e
Q psy534 70 QGWYECKVVFLN----------R--SP--------NSHKNGTWFHLDVHG---------V-------------------F 101 (145)
Q Consensus 70 ~G~Y~C~~~~~~----------~--~~--------~~~~~g~~~~l~c~~---------~-------------------~ 101 (145)
+|.|.|++.+.. + ++ .....|..+.|.|.. + .
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~ 160 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKE 160 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEEC
T ss_pred CeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEe
Confidence 999999996532 0 11 123568999999981 0 0
Q ss_pred cCC--cEEEEcccCCCCCeeeEEEEecCCC-CcEEEE
Q psy534 102 NDG--TELRISNIRSQDIGDYTCLATHVLY-PDLLVV 135 (145)
Q Consensus 102 ~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g-~~~~v~ 135 (145)
.++ ..|.|.+++.+|+|.|+|.|.|.+| ++-..+
T Consensus 161 ~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v~v 197 (203)
T 4fa8_A 161 KDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGVYV 197 (203)
T ss_dssp TTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEEEE
T ss_pred CCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEEEE
Confidence 122 1234468999999999999999999 443333
No 2
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.69 E-value=1.9e-17 Score=112.24 Aligned_cols=124 Identities=16% Similarity=0.203 Sum_probs=89.5
Q ss_pred HHhhhccceeeEEeecCCCccEEEEecCCCCccc-----------ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 6 AVKSIFQMLSVGDFADDEDIPVYIWYDSYPTHEA-----------EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 6 ~~~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~-----------~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
..+..+.++.+.|-+.+.|.+.+.|++++...+. ..+.+|+.+.......+..+|.|.+++.+|+|.|.
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 3456678888899988999999999998753111 33456666532111234667999999999999999
Q ss_pred EEEEEec-----------CCCC-CCCCCcEEEEEEeE---------Ee-------cCCcEEEEcccCCCCCeeeEEEEec
Q psy534 75 CKVVFLN-----------RSPN-SHKNGTWFHLDVHG---------VF-------NDGTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 75 C~~~~~~-----------~~~~-~~~~g~~~~l~c~~---------~~-------~~~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
|.+.+.. .++. ....|+.+.|.|.. +. .....|.|.+++.+|+|.|+|.|.|
T Consensus 85 C~~~~~~~~~~l~V~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 164 (184)
T 2ny1_B 85 CEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQ 164 (184)
T ss_dssp EEETTEEEEEEEEEEEEEESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEEESSEEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCCcEEEEEEEecCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccccCceEEEEecCCcCCCeEEEEEEEE
Confidence 9984321 1222 23569999999982 11 1234899999999999999999999
Q ss_pred CCC
Q psy534 127 VLY 129 (145)
Q Consensus 127 ~~g 129 (145)
..+
T Consensus 165 ~~~ 167 (184)
T 2ny1_B 165 NQK 167 (184)
T ss_dssp TTE
T ss_pred CCc
Confidence 877
No 3
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.69 E-value=6e-17 Score=111.25 Aligned_cols=121 Identities=22% Similarity=0.231 Sum_probs=87.9
Q ss_pred hhccceeeEEeecCCC----ccEEEEecC----------------CCCcc--cccccceEEEecCCCCCCeeeEEEcccC
Q psy534 9 SIFQMLSVGDFADDED----IPVYIWYDS----------------YPTHE--AEEYKGRISRVDKESPFGMASLNLTKIR 66 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p----~p~~~w~k~----------------~~~~~--~~~~~~R~~~~~~~~~~~~~sL~I~~v~ 66 (145)
..+.++.+.|.+.+.+ .+.+.|++. +.... ...+.+|+.+..++...++.+|.|.+++
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~ 92 (214)
T 3jz7_A 13 AKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQ 92 (214)
T ss_dssp ETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECSCC
T ss_pred ecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEccCC
Confidence 4566777778877665 468888873 21111 3467888888654444568999999999
Q ss_pred CCCCEEEEEEEEEec----------C--CCC--------CCCCCcEEEEEEeE----------Ee---------------
Q psy534 67 ESDQGWYECKVVFLN----------R--SPN--------SHKNGTWFHLDVHG----------VF--------------- 101 (145)
Q Consensus 67 ~~D~G~Y~C~~~~~~----------~--~~~--------~~~~g~~~~l~c~~----------~~--------------- 101 (145)
.+|+|.|.|.+.+.. + ++. ....|..+.|.|.. +.
T Consensus 93 ~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~~ 172 (214)
T 3jz7_A 93 LSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAE 172 (214)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGGG
T ss_pred hhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccceec
Confidence 999999999996532 0 111 23458899999982 11
Q ss_pred cCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 NDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..+..|.|.+++.+|+|.|+|.|.|..|
T Consensus 173 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~g 200 (214)
T 3jz7_A 173 MTSPVISVKNASSEYSGTYSCTVQNRVG 200 (214)
T ss_dssp TTSSEEEECSCCGGGCEEEEEEEECSSC
T ss_pred cCCCEEEEecCCHHHCEEEEEEEEcCCC
Confidence 1235899999999999999999999998
No 4
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.68 E-value=3.4e-16 Score=105.76 Aligned_cols=115 Identities=21% Similarity=0.252 Sum_probs=83.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
...+.++.+.|-+.+.|.+.+.|++++.. +......|+... .+++|.|.+++.+|+|.|+|.+.+...
T Consensus 14 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~-~~~~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 86 (189)
T 2v5t_A 14 FKQGEDAEVVCRVSSSPAPAVSWLYHNEE-VTTISDNRFAML------ANNNLQILNINKSDEGIYRCEGRVEARGEIDF 86 (189)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEC------CBCCCTTEEEC------TTSCEEETTCCGGGCEEEEEEEEETTTTEEEE
T ss_pred EeCCCcEEEEEEEcCCCCCEEEEEECCcc-ceeccCCeEEEe------cCCCEEEeeCCHhHCcEEEEEEEEcCCCceEE
Confidence 34567888889998999999999999754 333344566552 367899999999999999999864320
Q ss_pred ---------C------CC----CCCCCcEEEEEEeE---------E---------------ecCCcEEEEcccCCCCCee
Q psy534 83 ---------S------PN----SHKNGTWFHLDVHG---------V---------------FNDGTELRISNIRSQDIGD 119 (145)
Q Consensus 83 ---------~------~~----~~~~g~~~~l~c~~---------~---------------~~~~~~L~i~~v~~~d~G~ 119 (145)
+ +. ....|..+.|.|.. + ...+..|.|.+++.+|+|.
T Consensus 87 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 166 (189)
T 2v5t_A 87 RDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGP 166 (189)
T ss_dssp EEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEE
T ss_pred EEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCee
Confidence 1 11 13458999999981 0 1123579999999999999
Q ss_pred eEEEEecCCC
Q psy534 120 YTCLATHVLY 129 (145)
Q Consensus 120 Y~C~a~n~~g 129 (145)
|+|.|.|..|
T Consensus 167 Y~C~a~n~~g 176 (189)
T 2v5t_A 167 YVCRATNKAG 176 (189)
T ss_dssp EEEEEEETTE
T ss_pred EEEEEEeCCC
Confidence 9999999998
No 5
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.68 E-value=8.2e-16 Score=105.59 Aligned_cols=116 Identities=21% Similarity=0.265 Sum_probs=87.1
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCc----------------ccccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTH----------------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~----------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
...+.++.+.|-..+.+.+.+.||++.... ..+.+.+|+.+. .+++|.|.+++.+|+|
T Consensus 11 v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~------~~~~L~i~~v~~~D~G 84 (208)
T 3r4d_A 11 VAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY------SNGSLLFQMITMKDMG 84 (208)
T ss_dssp EETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC------TTSCEEECSCCGGGCE
T ss_pred eecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe------cCCeEEEccccccCCe
Confidence 346778889998778889999999875321 122356677663 3678999999999999
Q ss_pred EEEEEEEEec-----------C--C---C------CCCCCCcEEEEEEeE-----------------------EecCCcE
Q psy534 72 WYECKVVFLN-----------R--S---P------NSHKNGTWFHLDVHG-----------------------VFNDGTE 106 (145)
Q Consensus 72 ~Y~C~~~~~~-----------~--~---~------~~~~~g~~~~l~c~~-----------------------~~~~~~~ 106 (145)
.|+|.+.+.. + + + .....|+.+.|.|.. ....+..
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~pp~i~W~~~g~~l~~~~~~~~~~~~~~ 164 (208)
T 3r4d_A 85 VYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSI 164 (208)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTTCEEEEEETTEECCCCSSEEEETTTTE
T ss_pred EEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCCCceEEEECCEeCCCCCCeEEcCCCCE
Confidence 9999996542 0 1 1 114568999999981 0123368
Q ss_pred EEEcccCCCCCeeeEEEEecCCC
Q psy534 107 LRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 107 L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
|.|.+++.+|+|.|+|.|.|.+|
T Consensus 165 L~i~~v~~~d~G~Y~C~a~N~~g 187 (208)
T 3r4d_A 165 LRIDPIKREDAGEYQCEISNPVS 187 (208)
T ss_dssp EEESSCCGGGCEEEEEEEECTTC
T ss_pred EEEeccCHHhCeEEEEEEecCCC
Confidence 99999999999999999999998
No 6
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.67 E-value=4.4e-16 Score=108.06 Aligned_cols=137 Identities=17% Similarity=0.231 Sum_probs=91.0
Q ss_pred hhhccceeeEEeecCCCc-----cEEEEecCCCCc----------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 8 KSIFQMLSVGDFADDEDI-----PVYIWYDSYPTH----------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~-----p~~~w~k~~~~~----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
+..+.++.+.|.+.+.|. +.+.|++++... ....+.+|+.+..+....++++|.|.+++.+|+|.
T Consensus 7 ~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~ 86 (222)
T 4i0k_A 7 ALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEGS 86 (222)
T ss_dssp CCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCSC
T ss_pred EECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCEE
Confidence 345677888888776653 788898876321 03456788887655445568999999999999999
Q ss_pred EEEEEEEecC-----------C---C-------CCCCCCcEEEEEEeE----------Eec------------------C
Q psy534 73 YECKVVFLNR-----------S---P-------NSHKNGTWFHLDVHG----------VFN------------------D 103 (145)
Q Consensus 73 Y~C~~~~~~~-----------~---~-------~~~~~g~~~~l~c~~----------~~~------------------~ 103 (145)
|+|.+.+... + + .....|..+.|.|.. +.. .
T Consensus 87 Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~ 166 (222)
T 4i0k_A 87 YTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANER 166 (222)
T ss_dssp EEEEEEECCCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCC
Confidence 9999975321 1 1 112358899999982 000 1
Q ss_pred C--cEEEEcccCCCCCeeeEEEEecCCC-----CcEEEEeCeeEEecC
Q psy534 104 G--TELRISNIRSQDIGDYTCLATHVLY-----PDLLVVLGSFHIHTG 144 (145)
Q Consensus 104 ~--~~L~i~~v~~~d~G~Y~C~a~n~~g-----~~~~v~~~~~~~~~~ 144 (145)
+ ..|.|.+++.+|+|.|+|.|.|..| ..+.|....+.+.|.
T Consensus 167 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 214 (222)
T 4i0k_A 167 GLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFPPE 214 (222)
T ss_dssp SCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC--------
T ss_pred CeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccccCCc
Confidence 1 1278899999999999999999998 556665555655543
No 7
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.64 E-value=1.5e-15 Score=102.79 Aligned_cols=115 Identities=16% Similarity=0.176 Sum_probs=85.4
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
+...+.++.+.|-+.|.|.+.+.|++++... . ...|..+. ..+.+|.|.+++.+|+|.|.|.+.+...
T Consensus 15 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-~--~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 86 (192)
T 2va4_A 15 TAERGEEMTFSCRASGSPEPAISWFRNGKLI-E--ENEKYILK-----GSNTELTVRNIINSDGGPYVCRATNKAGEDEK 86 (192)
T ss_dssp ETTSCCCEEEECEEECSSCCEEEEEETTEEC-C--CSSSEEEE-----TTTTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred EEecCCCEEEEEeeccCCCCeEEEEECCeEc-C--CCccEEEe-----CCeeEEEEecCChhcCcEEEEEEEccccccce
Confidence 3456788899999999999999999987532 2 12344443 2367899999999999999999954320
Q ss_pred ---------------CCCCCCCCcEEEEEEeE---------EecC------------------------CcEEEEcccCC
Q psy534 83 ---------------SPNSHKNGTWFHLDVHG---------VFND------------------------GTELRISNIRS 114 (145)
Q Consensus 83 ---------------~~~~~~~g~~~~l~c~~---------~~~~------------------------~~~L~i~~v~~ 114 (145)
+......|..+.|.|.. +..+ ...|.|.+++.
T Consensus 87 ~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 166 (192)
T 2va4_A 87 QAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKL 166 (192)
T ss_dssp EEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCG
T ss_pred EEEEEEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCc
Confidence 11123458999999982 1111 13699999999
Q ss_pred CCCeeeEEEEecCCC
Q psy534 115 QDIGDYTCLATHVLY 129 (145)
Q Consensus 115 ~d~G~Y~C~a~n~~g 129 (145)
+|+|.|+|.|.|..|
T Consensus 167 ~d~G~Y~C~a~n~~g 181 (192)
T 2va4_A 167 SDSGRYDCEAASRIG 181 (192)
T ss_dssp GGCEEEEEEEECSSC
T ss_pred ccCEEEEEEEEecCC
Confidence 999999999999998
No 8
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.64 E-value=2.7e-15 Score=102.83 Aligned_cols=122 Identities=19% Similarity=0.218 Sum_probs=86.3
Q ss_pred hhhccceeeEEeecCCCcc---EEEEecCCCC---------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDEDIP---VYIWYDSYPT---------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p---~~~w~k~~~~---------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+-|.+.+.|.+ .+.|+|++.. .....+.+|+.+........+++|.|.+++.+|
T Consensus 11 v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 90 (218)
T 4frw_A 11 VVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQAD 90 (218)
T ss_dssp EETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGGG
T ss_pred EEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHHH
Confidence 3457788888888877644 4789887532 123446677776555445568899999999999
Q ss_pred CEEEEEEEEEecC-------------CC---------CCCCCCcEEEEEEeE---------Ee-------------cC--
Q psy534 70 QGWYECKVVFLNR-------------SP---------NSHKNGTWFHLDVHG---------VF-------------ND-- 103 (145)
Q Consensus 70 ~G~Y~C~~~~~~~-------------~~---------~~~~~g~~~~l~c~~---------~~-------------~~-- 103 (145)
+|.|.|.+.+... ++ .....+..+.+.|.. +. ..
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 170 (218)
T 4frw_A 91 EGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRS 170 (218)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSS
T ss_pred CCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceEecCCc
Confidence 9999999854321 11 112347788888871 00 11
Q ss_pred ---CcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 ---GTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 ---~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
...|.|.+++.+|+|.|+|.|+|..|
T Consensus 171 ~~~~s~L~i~~~~~~d~g~YtC~a~N~~g 199 (218)
T 4frw_A 171 AAVTSEFHLVPSRSMNGQPLTCVVSHPGL 199 (218)
T ss_dssp EEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred EEEEEEEEEeeCCHHhCeEEEEEEEeCCC
Confidence 12589999999999999999999998
No 9
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.64 E-value=2.1e-15 Score=102.36 Aligned_cols=117 Identities=18% Similarity=0.212 Sum_probs=83.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCccccc-ccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEE-YKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN----- 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~-~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~----- 81 (145)
...+.++.+.|.+.|.|.+.+.|++++....... ...++... .+..+|.|.+++.+|+|.|+|.+.+..
T Consensus 17 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~ 91 (194)
T 2a38_A 17 VLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFS-----DGRAKLTIPAVTKANSGRYSLKATNGSGQATS 91 (194)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEE-----TTEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred EECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeC-----CCEEEEEECCCCcccCEEEEEEEEcCCceEeE
Confidence 3457788899999999999999999875422211 12233221 346799999999999999999995421
Q ss_pred -----C-----------CCC--CCCCCcEEEEEEeE---------Eec---------------CC--cEEEEcccCCCCC
Q psy534 82 -----R-----------SPN--SHKNGTWFHLDVHG---------VFN---------------DG--TELRISNIRSQDI 117 (145)
Q Consensus 82 -----~-----------~~~--~~~~g~~~~l~c~~---------~~~---------------~~--~~L~i~~v~~~d~ 117 (145)
+ .+. ....|..+.|.|.. +.. ++ ..|.|.+++.+|+
T Consensus 92 ~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 171 (194)
T 2a38_A 92 TAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDS 171 (194)
T ss_dssp EEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGC
T ss_pred EEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcC
Confidence 0 011 13458999999981 100 11 1689999999999
Q ss_pred eeeEEEEecCCC
Q psy534 118 GDYTCLATHVLY 129 (145)
Q Consensus 118 G~Y~C~a~n~~g 129 (145)
|.|+|.|.|..|
T Consensus 172 G~Y~C~a~n~~g 183 (194)
T 2a38_A 172 GTYSVNATNSVG 183 (194)
T ss_dssp EEEEEEEEETTE
T ss_pred eEEEEEEEeCCC
Confidence 999999999998
No 10
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.63 E-value=6.2e-16 Score=116.06 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=82.1
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+..+.+.|.+.|.|.|.+.|++++...+.. +.... ..+++|.|.+++.+|+|.|+|.|.+...
T Consensus 218 ~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~----~~~~~-----~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 288 (384)
T 3kld_A 218 EKGTTVKLECFALGNPVPTILWRRADGKPIAR----KARRH-----KSNGILEIPNFQQEDAGSYECVAENSRGKNVAKG 288 (384)
T ss_dssp ETTSCEEEEEEEEEESCCEEEEEETTCCCCCT----TCEEC-----TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCCCcEEEEEEEeecCCCcEEEEeCCCccccc----cceec-----CCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEE
Confidence 34667788899999999999999865432221 11111 2367899999999999999999965320
Q ss_pred ------C------CC--CCCCCcEEEEEEeE---------Ee-------------cCCcEEEEcccCCCCCeeeEEEEec
Q psy534 83 ------S------PN--SHKNGTWFHLDVHG---------VF-------------NDGTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 83 ------~------~~--~~~~g~~~~l~c~~---------~~-------------~~~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
+ +. ....|..+.|.|.. +. ..+..|.|.+++.+|+|.|+|.|.|
T Consensus 289 ~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N 368 (384)
T 3kld_A 289 QLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAEN 368 (384)
T ss_dssp EEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEEEEEEe
Confidence 1 11 13458899999981 11 1124899999999999999999999
Q ss_pred CCC
Q psy534 127 VLY 129 (145)
Q Consensus 127 ~~g 129 (145)
.+|
T Consensus 369 ~~G 371 (384)
T 3kld_A 369 KHG 371 (384)
T ss_dssp TTE
T ss_pred CCc
Confidence 999
No 11
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.63 E-value=2.4e-15 Score=108.03 Aligned_cols=124 Identities=22% Similarity=0.267 Sum_probs=85.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|-+.|.|.+.+.|++++.. +......|... ..+.+|.|.+++.+|+|.|.|.+.+...
T Consensus 111 ~~G~~v~l~C~~~~~p~~~v~W~~~~~~-~~~~~~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~ 183 (291)
T 2wim_A 111 KQGEDAEVVCRVSSSPAPAVSWLYHNEE-VTTISDNRFAM------LANNNLQILNINKSDEGIYRCEGRVEARGEIDFR 183 (291)
T ss_dssp ETTSCEEECCCCBCSSCCEEEEECC-----CBCCCSSEEE------CTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEE
T ss_pred cCCCCEEEEEEEccCCCCEEEEEECCcc-ccccCCceEEE------ccCCCEEEEecchhhCEEEEEEEEECCCCeeEEe
Confidence 3566778889888999999999999754 22223445554 2367899999999999999999965320
Q ss_pred --------CCC----------CCCCCcEEEEEEeE---------E---------------ecCCcEEEEcccCCCCCeee
Q psy534 83 --------SPN----------SHKNGTWFHLDVHG---------V---------------FNDGTELRISNIRSQDIGDY 120 (145)
Q Consensus 83 --------~~~----------~~~~g~~~~l~c~~---------~---------------~~~~~~L~i~~v~~~d~G~Y 120 (145)
+|. ....|+.+.|.|.. + ...+..|.|.+++.+|+|.|
T Consensus 184 ~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 263 (291)
T 2wim_A 184 DIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPY 263 (291)
T ss_dssp EEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEE
T ss_pred eEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEE
Confidence 111 13458999999981 0 11235799999999999999
Q ss_pred EEEEecCCC-----CcEEEEeCee
Q psy534 121 TCLATHVLY-----PDLLVVLGSF 139 (145)
Q Consensus 121 ~C~a~n~~g-----~~~~v~~~~~ 139 (145)
+|.|.|..| ..+.|...++
T Consensus 264 ~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 264 VCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp EEEEEETTEEEEEEEEEEC-----
T ss_pred EEEEEECCCceeeeEEEEEEEecc
Confidence 999999999 4555544443
No 12
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.63 E-value=4e-15 Score=102.04 Aligned_cols=120 Identities=13% Similarity=0.155 Sum_probs=85.9
Q ss_pred hhhccceeeEEeecCCCc-----cEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC
Q psy534 8 KSIFQMLSVGDFADDEDI-----PVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~-----p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~ 82 (145)
+..+..+.+.|-+.+.|. +.+.|++.+.. ...+.+|+.+..+....++.+|.|.+++.+|+|.|.|.+.+...
T Consensus 14 v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~--~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 91 (202)
T 3bp6_B 14 VDVGSSVSLECDFDRRECTELEGIRASLQKVEND--TSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAA 91 (202)
T ss_dssp EETTSCEEEEEEECTTC---CTTEEEEEEECC----CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred EeCCCcEEEEEEecCCCCCCccceEEEEEcCCCc--ccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCC
Confidence 345678888999998876 89999994322 23566777775533333578999999999999999999965320
Q ss_pred ------------CCC-------CCCCCcEEEEEEeEE---------e-------------cCC--cEEEEcccCCCCCee
Q psy534 83 ------------SPN-------SHKNGTWFHLDVHGV---------F-------------NDG--TELRISNIRSQDIGD 119 (145)
Q Consensus 83 ------------~~~-------~~~~g~~~~l~c~~~---------~-------------~~~--~~L~i~~v~~~d~G~ 119 (145)
++. ....|..+.|.|... . ..+ ..+.|.+++.+|+|.
T Consensus 92 ~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~d~G~ 171 (202)
T 3bp6_B 92 WDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKPQPSRN 171 (202)
T ss_dssp EEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEECCCTTCC
T ss_pred cceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEEcCCCCE
Confidence 111 134689999999820 0 112 245677899999999
Q ss_pred eEEEEecCCC
Q psy534 120 YTCLATHVLY 129 (145)
Q Consensus 120 Y~C~a~n~~g 129 (145)
|+|.|.|..|
T Consensus 172 Y~C~a~N~~g 181 (202)
T 3bp6_B 172 FSCMFWNAHM 181 (202)
T ss_dssp EEEEEEETTT
T ss_pred EEEEEEcCCc
Confidence 9999999998
No 13
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.62 E-value=1.3e-15 Score=103.75 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=83.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|-+.|.|.+.+.|++++....... .+..+... ..+..+|.|.+++.+|+|.|.|.+.+..
T Consensus 16 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 91 (197)
T 2j8h_A 16 VRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG--LKYRIQEF--KGGYHQLIIASVTDDDATVYQVRATNQGGSVSGT 91 (197)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEETTEECCCCS--SSEEEEEE--TTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEE
T ss_pred EcCCCEEEEEEEEeecCCCEEEEEECCEECccCC--CcEEEEEc--CCCEEEEEECcCCHHhCEEEEEEEEECCCceeEE
Confidence 3456788899999999999999999875422211 23332210 1335699999999999999999996432
Q ss_pred ----C-------CCCC--------CCCCcEEEEEEeE---------Ee-----------------cCCcEEEEcc-cCCC
Q psy534 82 ----R-------SPNS--------HKNGTWFHLDVHG---------VF-----------------NDGTELRISN-IRSQ 115 (145)
Q Consensus 82 ----~-------~~~~--------~~~g~~~~l~c~~---------~~-----------------~~~~~L~i~~-v~~~ 115 (145)
+ .+.. ...|..+.|.|.. +. .....|.|.+ ++.+
T Consensus 92 ~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~ 171 (197)
T 2j8h_A 92 ASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERK 171 (197)
T ss_dssp EEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGG
T ss_pred EEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcc
Confidence 0 1110 2348889999981 00 0124788889 9999
Q ss_pred CCeeeEEEEecCCC
Q psy534 116 DIGDYTCLATHVLY 129 (145)
Q Consensus 116 d~G~Y~C~a~n~~g 129 (145)
|+|.|+|.|.|..|
T Consensus 172 d~G~Y~C~a~N~~g 185 (197)
T 2j8h_A 172 DAGFYVVCAKNRFG 185 (197)
T ss_dssp GCEEEEEEEEETTE
T ss_pred cCEeEEEEEEeCCC
Confidence 99999999999998
No 14
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.62 E-value=2.4e-15 Score=102.36 Aligned_cols=116 Identities=19% Similarity=0.102 Sum_probs=84.5
Q ss_pred hhhccceeeEEe-ecCCCc-cEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC---
Q psy534 8 KSIFQMLSVGDF-ADDEDI-PVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR--- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w-~~g~p~-p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~--- 82 (145)
...+.++.+.|- ..+.|. +.+.|++++... ......+.... ..+++|.|.+++.+|+|.|.|.+.+...
T Consensus 20 v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~-~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 20 VKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPV-FITMDKRRFVS-----QTNGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp EETTCCEEECCCCCSEESSCCEEEEEESSTTC-BCCCSSSEEEC-----TTTCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred EECCCCEEEeccccccCCCceEEEEEECCcee-eeeeCCCeEEE-----cCCCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 345667788888 778888 999999988542 22223333332 3378899999999999999999965220
Q ss_pred -------------------CC--------CCCCCCcEEEEEEeE---------E-------------ecCCcEEEEcccC
Q psy534 83 -------------------SP--------NSHKNGTWFHLDVHG---------V-------------FNDGTELRISNIR 113 (145)
Q Consensus 83 -------------------~~--------~~~~~g~~~~l~c~~---------~-------------~~~~~~L~i~~v~ 113 (145)
+| .....|..+.|.|.. + ...+..|.|.+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~ 173 (201)
T 3s97_C 94 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQ 173 (201)
T ss_dssp EECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSCC
T ss_pred hhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccCC
Confidence 00 012348889999981 0 1234589999999
Q ss_pred CCCCeeeEEEEecCCC
Q psy534 114 SQDIGDYTCLATHVLY 129 (145)
Q Consensus 114 ~~d~G~Y~C~a~n~~g 129 (145)
.+|+|.|+|.|.|..|
T Consensus 174 ~~d~G~Y~C~a~n~~g 189 (201)
T 3s97_C 174 LEDEGIYECEAENIRG 189 (201)
T ss_dssp GGGCEEEEEEEEETTE
T ss_pred hhhCEEEEEEEEecCC
Confidence 9999999999999998
No 15
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.61 E-value=2.5e-15 Score=105.39 Aligned_cols=117 Identities=23% Similarity=0.285 Sum_probs=83.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|.+.|.|.+.+.|++++..........+.... ....+|.|.+++.+|+|.|+|.+.+..
T Consensus 27 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 101 (241)
T 3grw_A 27 VPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLR-----HQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 101 (241)
T ss_dssp EETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEE-----GGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred EcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeee-----ccceEEEEEeCCcccCEEEEEEEeecCCceEEE
Confidence 345777888899999999999999987543222211222221 347789999999999999999995421
Q ss_pred ----C---CC----------C--CCCCCcEEEEEEeE---------Eec-----------C------------------C
Q psy534 82 ----R---SP----------N--SHKNGTWFHLDVHG---------VFN-----------D------------------G 104 (145)
Q Consensus 82 ----~---~~----------~--~~~~g~~~~l~c~~---------~~~-----------~------------------~ 104 (145)
+ .+ . ....|..+.|.|.. +.. . .
T Consensus 102 ~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (241)
T 3grw_A 102 YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEAD 181 (241)
T ss_dssp EEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEE
T ss_pred EEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCc
Confidence 0 01 1 12358899999982 111 1 1
Q ss_pred cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.+++.+|+|.|+|.|.|..|
T Consensus 182 ~~L~i~~~~~~d~G~Y~C~a~N~~g 206 (241)
T 3grw_A 182 VRLRLANVSERDGGEYLCRATNFIG 206 (241)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eEEEECcCCcccCcEEEEEEecCcc
Confidence 2599999999999999999999998
No 16
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.60 E-value=3.7e-15 Score=102.01 Aligned_cols=114 Identities=16% Similarity=0.154 Sum_probs=80.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
...+.++.+.|.+.+ +.+.+.|+|++..... ..+... ......+|.|.+++.+|+|.|+|.+.+...
T Consensus 16 v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~---~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 87 (196)
T 3p2t_A 16 ISWGNSVTIWCQGTL-EAREYRLDKEESPAPW---DRQNPL----EPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPS 87 (196)
T ss_dssp EETTCCEEEEEECCT-TCCEEEEEETTSCSCS---EEECCC----SSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCC
T ss_pred CCCCCcEEEEeeCCC-CCCEEEEEECCCCCcc---cccccc----cCCceEEEEeccCCcccCceEEEEEeCCCcccCCC
Confidence 345778889998888 6789999999854211 111111 113478899999999999999999865320
Q ss_pred ------------CC------C-CCCCCcEEEEEEeEE--------e------------------cCCcEEEEcccCCCCC
Q psy534 83 ------------SP------N-SHKNGTWFHLDVHGV--------F------------------NDGTELRISNIRSQDI 117 (145)
Q Consensus 83 ------------~~------~-~~~~g~~~~l~c~~~--------~------------------~~~~~L~i~~v~~~d~ 117 (145)
.+ . ....|+.++|.|... . .....|.|.+++.+|+
T Consensus 88 ~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 167 (196)
T 3p2t_A 88 DPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSPMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHG 167 (196)
T ss_dssp CCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEEEEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGC
T ss_pred ccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCCCCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCC
Confidence 00 1 124589999999821 0 1123699999999999
Q ss_pred eeeEEEEecCCC
Q psy534 118 GDYTCLATHVLY 129 (145)
Q Consensus 118 G~Y~C~a~n~~g 129 (145)
|.|+|.|.|..+
T Consensus 168 G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 168 GTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEEECGGG
T ss_pred CeEEEEEEcCCC
Confidence 999999999875
No 17
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.60 E-value=2.9e-15 Score=101.51 Aligned_cols=114 Identities=20% Similarity=0.248 Sum_probs=84.1
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|-+.|.|.+.+.|++++... .....|..+..+ ..+|.|.+++.+|+|.|.|.+.+...
T Consensus 20 ~~G~~v~l~C~~~~~p~~~i~W~~~~~~~--~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 92 (192)
T 2iep_A 20 LVEEVATFMCAVESYPQPEISWTRNKILI--KLFDTRYSIREN-----GQLLTILSVEDSDDGIYCCTANNGVGGAVESC 92 (192)
T ss_dssp ETTSCEEEECCEEEESCCEEEEEETTEEC--CTTCTTEEEEGG-----GTEEEESSCCGGGCEEEEEEEECSSSCCEEEE
T ss_pred eCCCcEEEEeeCCCCCCCeEEEEECCEEc--cccCccEEEcCC-----ccEEEEcCCCcccCeEEEEEEEcCCCceeEeE
Confidence 45667888898888899999999987432 123456655332 45799999999999999999965321
Q ss_pred -------------CCC--CCCCCcEEEEEEeE---------E--------------ecCCcEEEEcccCCCCCeeeEEEE
Q psy534 83 -------------SPN--SHKNGTWFHLDVHG---------V--------------FNDGTELRISNIRSQDIGDYTCLA 124 (145)
Q Consensus 83 -------------~~~--~~~~g~~~~l~c~~---------~--------------~~~~~~L~i~~v~~~d~G~Y~C~a 124 (145)
.+. ....|..+.|.|.. + ......|.|.+++.+|+|.|+|.|
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 172 (192)
T 2iep_A 93 GALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVA 172 (192)
T ss_dssp EEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEE
T ss_pred EEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCEEEEEEE
Confidence 111 12358889999981 0 112347999999999999999999
Q ss_pred ecCCC
Q psy534 125 THVLY 129 (145)
Q Consensus 125 ~n~~g 129 (145)
.|..|
T Consensus 173 ~n~~g 177 (192)
T 2iep_A 173 KNSLG 177 (192)
T ss_dssp EETTE
T ss_pred EcCCC
Confidence 99988
No 18
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.60 E-value=5.5e-15 Score=102.22 Aligned_cols=126 Identities=17% Similarity=0.164 Sum_probs=85.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEccc-CCCCCEEEEEEEEEec-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKI-RESDQGWYECKVVFLN----- 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v-~~~D~G~Y~C~~~~~~----- 81 (145)
...+.++.+.|-+.|.|.+.+.|++++..... ++...... ......+|.|.++ +.+|+|.|+|.+.+..
T Consensus 18 v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~----~~~~~~~~-~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~ 92 (212)
T 2yd6_A 18 GVSGGVASFICQATGDPRPKIVWNKKGKKVSN----QRFEVIEF-DDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISV 92 (212)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCC----TTEEEEEE-GGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEE
T ss_pred EecCCeEEEEEEEeeCCCCEEEEEECCcCCCC----CceeEEEE-cCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEE
Confidence 34567888999999999999999999754221 12221110 0123677999999 5999999999996432
Q ss_pred -----C------C---C------C--CCCCCcEEEEEEeE---------Ee--------------------cCCcEEEEc
Q psy534 82 -----R------S---P------N--SHKNGTWFHLDVHG---------VF--------------------NDGTELRIS 110 (145)
Q Consensus 82 -----~------~---~------~--~~~~g~~~~l~c~~---------~~--------------------~~~~~L~i~ 110 (145)
+ + | . ....|..+.|.|.. +. .....|.|.
T Consensus 93 ~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~ 172 (212)
T 2yd6_A 93 STRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIE 172 (212)
T ss_dssp EEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEEC
T ss_pred EEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEc
Confidence 0 0 1 0 01248899999981 00 012578999
Q ss_pred ccCCCCCeeeEEEEecCCC------CcEEEEeCe
Q psy534 111 NIRSQDIGDYTCLATHVLY------PDLLVVLGS 138 (145)
Q Consensus 111 ~v~~~d~G~Y~C~a~n~~g------~~~~v~~~~ 138 (145)
+++.+|+|.|+|.|.|.+| ..+.|....
T Consensus 173 ~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 173 QSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 9999999999999999998 455554443
No 19
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.60 E-value=5.5e-15 Score=103.17 Aligned_cols=90 Identities=20% Similarity=0.236 Sum_probs=60.4
Q ss_pred ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----------C-CC------CCCCCcEEEEEEeE--
Q psy534 40 EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR-----------S-PN------SHKNGTWFHLDVHG-- 99 (145)
Q Consensus 40 ~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~-----------~-~~------~~~~g~~~~l~c~~-- 99 (145)
..+.+|+.........++.+|.|.+++.+|+|.|.|++.+... . .. ....|..+.|.|..
T Consensus 65 ~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g 144 (226)
T 4f80_A 65 APYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTG 144 (226)
T ss_dssp TTTTTTEEEECTTGGGTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEE
T ss_pred ccccceEEEecccccCCeEEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEecc
Confidence 4567788776655556789999999999999999999965321 0 00 12348889999971
Q ss_pred --------Ee-----------------cCC--cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 100 --------VF-----------------NDG--TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 100 --------~~-----------------~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+. .++ ..+.+.+++.+|+|.|+|.|+|.+|
T Consensus 145 ~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g 201 (226)
T 4f80_A 145 WYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLL 201 (226)
T ss_dssp EBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTT
T ss_pred CCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCC
Confidence 11 111 1234557889999999999999998
No 20
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.60 E-value=6.8e-15 Score=105.65 Aligned_cols=114 Identities=21% Similarity=0.274 Sum_probs=84.5
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|-+.|.|.|.+.|++++... ......|... ..+++|.|.+++.+|+|.|.|.+.+...
T Consensus 113 ~~g~~v~l~C~~~~~p~~~v~W~~~~~~~-~~~~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 185 (291)
T 1qz1_A 113 KEGEDAVIVCDVVSSLPPTIIWKHKGRDV-ILKKDVRFIV------LSNNYLQIRGIKKTDEGTYRCEGRILARGEINFK 185 (291)
T ss_dssp ETTSCEEECCEEECSSCCEEEEEETTSCS-STTCCTTEEE------CTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEE
T ss_pred cCCCeEEEEEEeccCCCCEEEEEECCEEc-ccCCCceEEE------ccCCcEEEccCccccCeEEEEEEEecCCCceeeE
Confidence 35667788898889999999999998542 2222334443 2367899999999999999999965320
Q ss_pred --------CC------C----CCCCCcEEEEEEeEE---------------e-------------cCCcEEEEcccCCCC
Q psy534 83 --------SP------N----SHKNGTWFHLDVHGV---------------F-------------NDGTELRISNIRSQD 116 (145)
Q Consensus 83 --------~~------~----~~~~g~~~~l~c~~~---------------~-------------~~~~~L~i~~v~~~d 116 (145)
+| . ....|+.+.|.|... . ..+..|.|.+++.+|
T Consensus 186 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 265 (291)
T 1qz1_A 186 DIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKND 265 (291)
T ss_dssp EEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGG
T ss_pred EEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhc
Confidence 11 1 134599999999810 0 123479999999999
Q ss_pred CeeeEEEEecCCC
Q psy534 117 IGDYTCLATHVLY 129 (145)
Q Consensus 117 ~G~Y~C~a~n~~g 129 (145)
+|.|+|.|.|..|
T Consensus 266 ~G~Y~C~a~N~~G 278 (291)
T 1qz1_A 266 EAEYVCIAENKAG 278 (291)
T ss_dssp CEEEEEEEEETTE
T ss_pred CEEEEEEEEeCCC
Confidence 9999999999998
No 21
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.60 E-value=2.1e-14 Score=97.27 Aligned_cols=121 Identities=19% Similarity=0.200 Sum_probs=86.3
Q ss_pred hhhccceeeEEeecCCC-ccEEEEec-CCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC---
Q psy534 8 KSIFQMLSVGDFADDED-IPVYIWYD-SYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR--- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p-~p~~~w~k-~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~--- 82 (145)
...+.++.+.|-+.+.| .+.+.|++ ++.. +. ....|+.+... .....+|.|.+++.+|+|.|.|.+.+...
T Consensus 14 v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~-~~-~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 89 (191)
T 1epf_A 14 ISVGESKFFLCQVAGDAKDKDISWFSPNGEK-LS-PNQQRISVVWN--DDDSSTLTIYNANIDDAGIYKCVVTAEDGTQS 89 (191)
T ss_dssp EETTCCEEEEEEECCCSCCCEEEEECTTSCE-EC-CBSSSEEEEEE--ETTEEEEEECSCCGGGCEEEEEEEEETTTEEE
T ss_pred EcCCCCEEEEEECCCCCCCceEEEEeCCCcc-cc-CCCCeEEEEEC--CCCceEEEEccCCcccCEEEEEEEEcCCCcce
Confidence 34677888999999876 89999999 5533 22 12344544321 13478999999999999999999965420
Q ss_pred ----------C------CC--CCCCCcEEEEEEeEE-------------------------ecCCcEEEEcccCCCCCee
Q psy534 83 ----------S------PN--SHKNGTWFHLDVHGV-------------------------FNDGTELRISNIRSQDIGD 119 (145)
Q Consensus 83 ----------~------~~--~~~~g~~~~l~c~~~-------------------------~~~~~~L~i~~v~~~d~G~ 119 (145)
+ +. ....|+.+.|.|... ...+..|.|.+++.+|+|.
T Consensus 90 ~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 169 (191)
T 1epf_A 90 EATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGT 169 (191)
T ss_dssp EEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEE
T ss_pred EEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCEE
Confidence 1 11 134689999999810 1123379999999999999
Q ss_pred eEEEEecCCCCcE
Q psy534 120 YTCLATHVLYPDL 132 (145)
Q Consensus 120 Y~C~a~n~~g~~~ 132 (145)
|+|.|.|..+.++
T Consensus 170 Y~C~a~n~~~~~~ 182 (191)
T 1epf_A 170 YRCEGRILARGEI 182 (191)
T ss_dssp EEEEEEEGGGTEE
T ss_pred EEEEEEEecceeE
Confidence 9999999986443
No 22
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.60 E-value=2.4e-14 Score=96.91 Aligned_cols=119 Identities=18% Similarity=0.145 Sum_probs=83.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
...+.++.+.|-+.|.|. .+.|++.++..+. ...|+.+..+ ....+|.|.+++.+|+|.|+|.+.+...
T Consensus 14 v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~--~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~ 87 (189)
T 2v44_A 14 LSVGESKFFTCTAIGEPE-SIDWYNPQGEKII--STQRVVVQKE---GVRSRLTIYNANIEDAGIYRCQATDAKGQTQEA 87 (189)
T ss_dssp EETTCCEEEEEEEEECCS-EEEEECTTSCBCC--CCSSEEEEEE---TTEEEEEECSCCGGGCEEEEEEEECTTSCEEEE
T ss_pred EecCCcEEEEEEeecCCe-eEEEEeCCCCccC--CCceEEEECC---CCeEEEEEccCCcccCeEEEEEEEeCCCCcEEE
Confidence 346778888999988887 8999994333222 2345554321 2356999999999999999999964310
Q ss_pred --------CC------C--CCCCCcEEEEEEeEE-------------------------ecCCcEEEEcccCCCCCeeeE
Q psy534 83 --------SP------N--SHKNGTWFHLDVHGV-------------------------FNDGTELRISNIRSQDIGDYT 121 (145)
Q Consensus 83 --------~~------~--~~~~g~~~~l~c~~~-------------------------~~~~~~L~i~~v~~~d~G~Y~ 121 (145)
++ . ....|..+.|.|... ...+..|.|.+++.+|+|.|+
T Consensus 88 ~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 167 (189)
T 2v44_A 88 TVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYR 167 (189)
T ss_dssp EEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEEE
T ss_pred EEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEE
Confidence 11 1 123588899999810 112347999999999999999
Q ss_pred EEEecCCCCcE
Q psy534 122 CLATHVLYPDL 132 (145)
Q Consensus 122 C~a~n~~g~~~ 132 (145)
|.|.|..|.+.
T Consensus 168 C~a~n~~~~~~ 178 (189)
T 2v44_A 168 CEGRVEARGEI 178 (189)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEccccCce
Confidence 99999997443
No 23
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.60 E-value=1.1e-14 Score=100.53 Aligned_cols=118 Identities=20% Similarity=0.277 Sum_probs=84.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCC-CCCEEEEEEEEEecC----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRE-SDQGWYECKVVFLNR---- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~-~D~G~Y~C~~~~~~~---- 82 (145)
...+.++.+.|-+.|.|.+.+.|++++.... ....|+.+... ..+..+|.|.+++. +|+|.|.|.+.+...
T Consensus 18 v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~--~~~~~~~~~~~--~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~ 93 (212)
T 2yd1_A 18 VRVGGVASFYCAARGDPPPSIVWRKNGKKVS--GTQSRYTVLEQ--PGGISILRIEPVRAGRDDAPYECVAENGVGDAVS 93 (212)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEETTEECC--TTSTTEEEEEE--TTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEE
T ss_pred EecCCEEEEEEEEccCCCCeEEEEECCEECC--CCcceeEEEEc--CCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEE
Confidence 3467788899999999999999999875422 12344444321 12347899999999 999999999954320
Q ss_pred ---------C-------CC--------CCCCCcEEEEEEeE---------Ee--------------cCCcEEEEcccCCC
Q psy534 83 ---------S-------PN--------SHKNGTWFHLDVHG---------VF--------------NDGTELRISNIRSQ 115 (145)
Q Consensus 83 ---------~-------~~--------~~~~g~~~~l~c~~---------~~--------------~~~~~L~i~~v~~~ 115 (145)
. |. ....|..+.|.|.. +. ..+..|.|.+++.+
T Consensus 94 ~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 173 (212)
T 2yd1_A 94 ADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREE 173 (212)
T ss_dssp EEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTEEEECSCCGG
T ss_pred eeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCeEEEccCChh
Confidence 1 10 01248899999981 00 01237999999999
Q ss_pred CCeeeEEEEecCCC
Q psy534 116 DIGDYTCLATHVLY 129 (145)
Q Consensus 116 d~G~Y~C~a~n~~g 129 (145)
|+|.|+|.|.|..|
T Consensus 174 d~G~Y~C~a~N~~G 187 (212)
T 2yd1_A 174 DQGKYECVAENSMG 187 (212)
T ss_dssp GCEEEEEEEEETTE
T ss_pred hCEEEEEEeecCCC
Confidence 99999999999998
No 24
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.59 E-value=6.7e-15 Score=100.94 Aligned_cols=115 Identities=17% Similarity=0.219 Sum_probs=86.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCc---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTH---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
...+.++.+.|-+.|.|.+.+.|++++... +...+..|+.+. ..+|.|.+++.+|+|.|+|.+.
T Consensus 13 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-------~~~L~i~~v~~~D~G~Y~C~~~ 85 (212)
T 1f97_A 13 VPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-------SSGITFSSVTRKDNGEYTCMVS 85 (212)
T ss_dssp EETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-------TTEEEESCCCGGGCEEEEEEEE
T ss_pred EEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-------ceeEEEcccCcccCeEEEEEEE
Confidence 345778889999999999999999987542 123445666652 4889999999999999999997
Q ss_pred Eec--------------CCCC--------CCCCCcEEEEEEe-E---------Ee-------------------------
Q psy534 79 FLN--------------RSPN--------SHKNGTWFHLDVH-G---------VF------------------------- 101 (145)
Q Consensus 79 ~~~--------------~~~~--------~~~~g~~~~l~c~-~---------~~------------------------- 101 (145)
+.. .+|. ....|..+.|.|. . +.
T Consensus 86 ~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~ 165 (212)
T 1f97_A 86 EEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTID 165 (212)
T ss_dssp ETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEEC
T ss_pred ccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEec
Confidence 631 0111 1245889999998 1 00
Q ss_pred cCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 NDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.....|.|.+++.+|+|.|+|.|.|..|
T Consensus 166 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 193 (212)
T 1f97_A 166 PKSGDLIFDPVTAFDSGEYYCQAQNGYG 193 (212)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEECSSS
T ss_pred CCCceEEEEecChhhCcEEEEEEccccC
Confidence 1134699999999999999999999998
No 25
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.59 E-value=3.8e-15 Score=103.40 Aligned_cols=116 Identities=19% Similarity=0.220 Sum_probs=81.9
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------- 81 (145)
..+.++.+.|-+.|.|.+.+.|++++..........+.... .+..+|.|.+++.+|+|.|+|.+.+..
T Consensus 32 ~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 32 PAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR-----NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp ETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEE-----GGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ccCCCEEEEEecccCCCCeEEEEECCccccccccccceeee-----cCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 45677888898889999999999987542211111111221 336789999999999999999996431
Q ss_pred ---C------CC-------C--CCCCCcEEEEEEeE---------Eec----------------------------CCcE
Q psy534 82 ---R------SP-------N--SHKNGTWFHLDVHG---------VFN----------------------------DGTE 106 (145)
Q Consensus 82 ---~------~~-------~--~~~~g~~~~l~c~~---------~~~----------------------------~~~~ 106 (145)
+ .+ . ....|..+.|.|.. +.. ....
T Consensus 107 ~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (231)
T 3ojm_B 107 HLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEV 186 (231)
T ss_dssp EEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTE
T ss_pred EEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccE
Confidence 0 01 0 02248889999981 111 1235
Q ss_pred EEEcccCCCCCeeeEEEEecCCC
Q psy534 107 LRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 107 L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
|.|.+++.+|+|.|+|.|.|..|
T Consensus 187 L~i~~~~~~d~G~Y~C~a~n~~g 209 (231)
T 3ojm_B 187 LALFNVTEADAGEYICKVSNYIG 209 (231)
T ss_dssp EEECSCCGGGCEEEEEEEEETTE
T ss_pred EEEecCCHHHCeEEEEEEEeccc
Confidence 99999999999999999999998
No 26
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.59 E-value=1.7e-14 Score=103.32 Aligned_cols=115 Identities=23% Similarity=0.265 Sum_probs=83.2
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|-+.|.|.+.+.|++++... ......+.... .....|.|.+++.+|+|.|.|.+.+...
T Consensus 112 ~~g~~~~l~C~~~g~p~~~v~W~~~~~~~-~~~~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 185 (284)
T 2rik_A 112 KQDEHTRYECKIGGSPEIKVLWYKDETEI-QESSKFRMSFV-----ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSST 185 (284)
T ss_dssp ETTCCEEEEEEEESSSCCEEEEEETTEEC-CCSSSEEEEEE-----TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred cCCceEEEEEEEeeeCCCEEEEEECCEEC-cCCCcEEEEEc-----CCEEEEEECCCCcccCEEEEEEEEcCCCceeEEE
Confidence 45667788899999999999999997532 22222223322 2378899999999999999999965321
Q ss_pred ------CC------C--CCCCCcEEEEEEeE---------Eec-----------------CCcEEEEcccCCCCCeeeEE
Q psy534 83 ------SP------N--SHKNGTWFHLDVHG---------VFN-----------------DGTELRISNIRSQDIGDYTC 122 (145)
Q Consensus 83 ------~~------~--~~~~g~~~~l~c~~---------~~~-----------------~~~~L~i~~v~~~d~G~Y~C 122 (145)
+| . ....|..+.|.|.. +.. ....|.|.+++.+|+|.|+|
T Consensus 186 ~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 265 (284)
T 2rik_A 186 SLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQC 265 (284)
T ss_dssp EEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEE
Confidence 11 1 12458899999981 000 01368899999999999999
Q ss_pred EEecCCC
Q psy534 123 LATHVLY 129 (145)
Q Consensus 123 ~a~n~~g 129 (145)
.|.|..|
T Consensus 266 ~a~N~~G 272 (284)
T 2rik_A 266 KASNDVG 272 (284)
T ss_dssp EEEETTE
T ss_pred EEEeCCC
Confidence 9999998
No 27
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.59 E-value=2.9e-15 Score=102.55 Aligned_cols=115 Identities=18% Similarity=0.242 Sum_probs=85.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCc---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTH---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
...+.++.+.|.+.|.|.+.+.|++++... ....+.+|+.+. ..+|.|.+++.+|+|.|+|.+.
T Consensus 16 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-------~~~L~i~~~~~~d~G~Y~C~~~ 88 (209)
T 1nbq_A 16 IPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-------PTGITFKSVTREDTGTYTCMVS 88 (209)
T ss_dssp EETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-------TTEEECSCCCTTSCSEEEEEEE
T ss_pred EEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-------ccEEEEeeCCHHHCcEEEEEEe
Confidence 345778888999999999999999987541 122344555542 4889999999999999999997
Q ss_pred EecC--------------CCC--------CCCCCcEEEEEEeE----------Ee------------------------c
Q psy534 79 FLNR--------------SPN--------SHKNGTWFHLDVHG----------VF------------------------N 102 (145)
Q Consensus 79 ~~~~--------------~~~--------~~~~g~~~~l~c~~----------~~------------------------~ 102 (145)
+... +|. ....|+.+.|.|.. +. .
T Consensus 89 ~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (209)
T 1nbq_A 89 EEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNP 168 (209)
T ss_dssp ETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCT
T ss_pred cCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcC
Confidence 6310 111 12348899999971 00 0
Q ss_pred CCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 DGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
....|.|.+++.+|+|.|+|.|.|..|
T Consensus 169 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g 195 (209)
T 1nbq_A 169 TTGELVFDPLSASDTGEYSCEARNGYG 195 (209)
T ss_dssp TTCCEEESSCCGGGCCCEEEEEECSSS
T ss_pred CcceEEEEeccccCCeEEEEEEeCCcC
Confidence 234799999999999999999999998
No 28
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.58 E-value=1.6e-14 Score=99.05 Aligned_cols=116 Identities=17% Similarity=0.183 Sum_probs=77.8
Q ss_pred hhccceeeEEeecC-CCccEEEEecCCCCc---------------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 9 SIFQMLSVGDFADD-EDIPVYIWYDSYPTH---------------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 9 ~~~~~~~~~~w~~g-~p~p~~~w~k~~~~~---------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
..+..+.+-|-+.+ .+.+.+.|++++... .++.|.+|+.+. .+++|.|.+++.+|+|.
T Consensus 11 ~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~------~~~sL~I~~v~~~D~G~ 84 (193)
T 2if7_A 11 ILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT------QSYSLQLSNLKMEDTGS 84 (193)
T ss_dssp ETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC------TTCCEEECSCCGGGCEE
T ss_pred EecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC------CCeEEEECCCCcccCce
Confidence 45666777777764 456788898874211 123356788773 37999999999999999
Q ss_pred EEEEEEEec----------C--CC---------CCCCCCc-EEEEEEeEE----------------ecCCcEEEEcccCC
Q psy534 73 YECKVVFLN----------R--SP---------NSHKNGT-WFHLDVHGV----------------FNDGTELRISNIRS 114 (145)
Q Consensus 73 Y~C~~~~~~----------~--~~---------~~~~~g~-~~~l~c~~~----------------~~~~~~L~i~~v~~ 114 (145)
|.|++.+.. + ++ .....|. .+.|.|... ...+..|.|.....
T Consensus 85 Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~~l~i~~~~~ 164 (193)
T 2if7_A 85 YRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPR 164 (193)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSSEEEEEECTT
T ss_pred EEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCCeEEEEeccC
Confidence 999995421 1 11 0112354 899999821 12234677765555
Q ss_pred C-CCeeeEEEEecCCCC
Q psy534 115 Q-DIGDYTCLATHVLYP 130 (145)
Q Consensus 115 ~-d~G~Y~C~a~n~~g~ 130 (145)
+ |+|.|+|.|.|.+|.
T Consensus 165 ~~d~G~Y~C~a~N~~g~ 181 (193)
T 2if7_A 165 ISSEQDYTCIAENAVSN 181 (193)
T ss_dssp TCSCCEEEEEEEETTEE
T ss_pred cCCCCcEEEEEECCCCc
Confidence 4 899999999999983
No 29
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=99.76 Aligned_cols=109 Identities=14% Similarity=0.152 Sum_probs=75.6
Q ss_pred eeEEeecC-CCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----------
Q psy534 15 SVGDFADD-EDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----------- 82 (145)
Q Consensus 15 ~~~~w~~g-~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----------- 82 (145)
.+.|-..| .|.+.+.|++++.. +.. ..|..+... ....+|.|.+++.+|+|.|+|.+.+...
T Consensus 21 ~l~C~~~~~~p~~~i~W~~~g~~-i~~--~~~~~~~~~---~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 21 QLYSFVTYYVEDLKVNWSHNGSA-IRY--SDRVKTGVT---GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp EEEEEBSSCCSSCEEEEEETTEE-CCC--CSSEEEEEE---TTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EEEEEEeccCCCceEEEEECCEE-ccC--CCeEEEEEe---CCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 44455555 46899999999753 222 244443221 2356799999999999999999965220
Q ss_pred ----------------------------CCC--CCCCCcEEEEEEeE---------E------ecC----------C--c
Q psy534 83 ----------------------------SPN--SHKNGTWFHLDVHG---------V------FND----------G--T 105 (145)
Q Consensus 83 ----------------------------~~~--~~~~g~~~~l~c~~---------~------~~~----------~--~ 105 (145)
.+. ....|+.+.|.|.. + ... + .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 011 12458899999981 0 000 1 2
Q ss_pred EEEEcccCCCCCeeeEEEEecCCC
Q psy534 106 ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 106 ~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|.|.+++.+|+|.|+|.|.|..|
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g 198 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYG 198 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEEcCcchHHCeEEEEEEEcCCC
Confidence 799999999999999999999998
No 30
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.57 E-value=1.4e-15 Score=103.85 Aligned_cols=113 Identities=16% Similarity=0.159 Sum_probs=81.5
Q ss_pred HHHhhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcc-cCCCCCEEEEEEEEEecC-
Q psy534 5 FAVKSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTK-IRESDQGWYECKVVFLNR- 82 (145)
Q Consensus 5 ~~~~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~-v~~~D~G~Y~C~~~~~~~- 82 (145)
|++...+.++.+.|-+.| +.+ +.|+|++... .. ..+.+|.|.+ ++.+|+|.|.|.+.+...
T Consensus 8 ~~v~~~G~~v~L~C~~~~-~~~-i~W~k~g~~l-~~--------------~~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~ 70 (186)
T 1jbj_A 8 YKVSISGTSVELTCPLDS-DEN-LKWEKNGQEL-PQ--------------KHDKHLVLQDFSEVEDSGYYVCYTPASNKN 70 (186)
T ss_dssp CEEEEETTEEEEECSSCC-CTT-CEEEETTEEE-CS--------------CCCSEEEEESCCTTTSCEEEEEECSSCCCC
T ss_pred EEEEeCCcEEEEEEeCCC-CCc-eEEEECCEEC-CC--------------CCCCEEEECCCCccccCEEEEEEEEeCCCc
Confidence 444556788889998887 444 9999987431 10 1266899999 999999999999854310
Q ss_pred -------------CCC-------------------------------CCCCCcEEEEEEeE------Ee----------c
Q psy534 83 -------------SPN-------------------------------SHKNGTWFHLDVHG------VF----------N 102 (145)
Q Consensus 83 -------------~~~-------------------------------~~~~g~~~~l~c~~------~~----------~ 102 (145)
++. ....|..+.|.|.. +. .
T Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~p~p~i~W~k~g~~i~~~~~ 150 (186)
T 1jbj_A 71 TYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTDKTIKWLKDGSIISPLNA 150 (186)
T ss_dssp CCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSSSCSCEEEEETTEECCCSSC
T ss_pred EEEEEEEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeCCCCeEEEEECCEECcccCC
Confidence 110 01268899999971 11 1
Q ss_pred CCcEEEEcccCCCCCeeeEEEEecCCCCcEEE
Q psy534 103 DGTELRISNIRSQDIGDYTCLATHVLYPDLLV 134 (145)
Q Consensus 103 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~v 134 (145)
.+..|.|.+++.+|+|.|+|.|.|..|..+.|
T Consensus 151 ~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~l~V 182 (186)
T 1jbj_A 151 TKNTWNLGNNAKDPRGTYQCQGAKETSNPLQV 182 (186)
T ss_dssp CSSCCEEEETTSCCEEEEEEEESSCEEEEEEE
T ss_pred CcceEEECCCCcCcCEEEEEEEEcCcCCcEEE
Confidence 34579999999999999999999999855443
No 31
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.57 E-value=5.5e-15 Score=102.41 Aligned_cols=106 Identities=16% Similarity=0.204 Sum_probs=78.7
Q ss_pred hhhccceeeEEeecCCCccE-EEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 8 KSIFQMLSVGDFADDEDIPV-YIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~-~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
...+.++.+.|.+.|.|.+. +.|++++.. +. ....+|.|.+++.+|+|.|+|.+.+...
T Consensus 19 v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~-----------l~-----~~~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~ 82 (204)
T 3sgj_C 19 VLEKDSVTLKCQGAYSPEDQSTQWFHNESL-----------IS-----SQASSYFIDAATVDDSGEYRCQTQLSTLSDPV 82 (204)
T ss_dssp EETTCCEEEEEECCSSSSCCCEEEEETTEE-----------ES-----CCSSEEEESSCCGGGCEEEEEEETTSBCCCCE
T ss_pred EECCCCEEEEEcCCCCCCCcEEEEEECCEE-----------cc-----cCccEEEEecccccCCEEEEEEeCCCcccccE
Confidence 34567888899999988776 999998743 10 1248899999999999999999843211
Q ss_pred ------------CCC-CCCCCcEEEEEEeE----------E---------ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 ------------SPN-SHKNGTWFHLDVHG----------V---------FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 ------------~~~-~~~~g~~~~l~c~~----------~---------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.+. ....|+.+.|.|.. . ...+..|.|.+++.+|+|.|+|.|.|..+
T Consensus 83 ~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 161 (204)
T 3sgj_C 83 QLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSK 161 (204)
T ss_dssp EEEEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcccCEEEEEEEEeCCC
Confidence 111 12359999999982 0 11234799999999999999999999543
No 32
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.57 E-value=4.5e-15 Score=104.47 Aligned_cols=118 Identities=18% Similarity=0.231 Sum_probs=85.3
Q ss_pred hhhccceeeEEeecC---CCccEEEEecCCCCc---------------------------ccccccceEEEecCCCCCCe
Q psy534 8 KSIFQMLSVGDFADD---EDIPVYIWYDSYPTH---------------------------EAEEYKGRISRVDKESPFGM 57 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g---~p~p~~~w~k~~~~~---------------------------~~~~~~~R~~~~~~~~~~~~ 57 (145)
...+.++.+.|-+.+ .|.+.+.|++++... ....+.+|+.+.. .++
T Consensus 14 v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~ 89 (250)
T 2fbo_J 14 VHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN----LAA 89 (250)
T ss_dssp ECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC----TTS
T ss_pred EecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc----CCc
Confidence 345677888888876 788999999886331 1144677777632 246
Q ss_pred eeEEEcccCCCCCEEEEEEEEEec---------------C--C---CCC---------CCCCcEEEEEEeEE--------
Q psy534 58 ASLNLTKIRESDQGWYECKVVFLN---------------R--S---PNS---------HKNGTWFHLDVHGV-------- 100 (145)
Q Consensus 58 ~sL~I~~v~~~D~G~Y~C~~~~~~---------------~--~---~~~---------~~~g~~~~l~c~~~-------- 100 (145)
.+|.|.+++.+|+|.|.|.+.+.. + + +.. ...|..+.|.|...
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~ 169 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVT 169 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEE
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeE
Confidence 789999999999999999996521 0 1 110 12488999999810
Q ss_pred -e------c--------------------------------CCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 101 -F------N--------------------------------DGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 101 -~------~--------------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
. . ....|.|.+++.+|+|.|+|.|.|.+|
T Consensus 170 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g 237 (250)
T 2fbo_J 170 WYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQG 237 (250)
T ss_dssp EEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSS
T ss_pred EEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCcc
Confidence 0 0 124899999999999999999999776
No 33
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.57 E-value=3.4e-14 Score=101.76 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=84.2
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------- 81 (145)
..+.++.+.|-+.|.|.+.+.|++++.. +...-+.++... ....+|.|.+++.+|+|.|+|.+.+..
T Consensus 18 ~~G~~v~l~C~~~g~p~~~v~W~~~~~~-~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~ 91 (284)
T 2rik_A 18 ALGESGTFKCHVTGTAPIKITWAKDNRE-IRPGGNYKMTLV-----ENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSA 91 (284)
T ss_dssp ETTCCEEEEEEEESSSCCEEEEEETTEE-CCSSSSEEEEEE-----TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCCCcEEEEEEEEcCCCCEEEEEECCEE-CcCCCcEEEEEc-----CCEEEEEEecCCcccCEEEEEEEEECCceEEEEE
Confidence 4567888999999999999999999753 222222233332 237899999999999999999996532
Q ss_pred ---C--CC------C---CCCCCcEEEEEEeE---------Ee-----------------cCCcEEEEcccCCCCCeeeE
Q psy534 82 ---R--SP------N---SHKNGTWFHLDVHG---------VF-----------------NDGTELRISNIRSQDIGDYT 121 (145)
Q Consensus 82 ---~--~~------~---~~~~g~~~~l~c~~---------~~-----------------~~~~~L~i~~v~~~d~G~Y~ 121 (145)
+ +| . ....|+.+.|.|.. +. .....|.|.+++.+|+|.|+
T Consensus 92 ~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 171 (284)
T 2rik_A 92 QLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYT 171 (284)
T ss_dssp EEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred EEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEE
Confidence 0 11 1 12458899999981 00 11236899999999999999
Q ss_pred EEEecCCC
Q psy534 122 CLATHVLY 129 (145)
Q Consensus 122 C~a~n~~g 129 (145)
|.|.|..|
T Consensus 172 C~a~n~~g 179 (284)
T 2rik_A 172 CEAHNAAG 179 (284)
T ss_dssp EEEECSSC
T ss_pred EEEEcCCC
Confidence 99999988
No 34
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.57 E-value=1.3e-14 Score=100.57 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=85.9
Q ss_pred hhhccceeeEEeecCCC-----ccEEEEecCCC------------CcccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDED-----IPVYIWYDSYP------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p-----~p~~~w~k~~~------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+.|.+.|.| .+.+.|++++. ......+.+|+.+..+....++.+|.|.+++.+|+
T Consensus 13 ~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~ 92 (222)
T 3sbw_C 13 VEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDA 92 (222)
T ss_dssp EETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGGC
T ss_pred EEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccccC
Confidence 34577788889987766 34899998641 11224567888875433344578999999999999
Q ss_pred EEEEEEEEEec---------C--CCC--------CCCCCcEEEEEEeE---------EecC-C----------------c
Q psy534 71 GWYECKVVFLN---------R--SPN--------SHKNGTWFHLDVHG---------VFND-G----------------T 105 (145)
Q Consensus 71 G~Y~C~~~~~~---------~--~~~--------~~~~g~~~~l~c~~---------~~~~-~----------------~ 105 (145)
|.|.|.+.+.. + ++. ....|..+.|.|.. +..+ + .
T Consensus 93 G~Y~C~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~ 172 (222)
T 3sbw_C 93 GVYRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEK 172 (222)
T ss_dssp EEEEEEEESSSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----
T ss_pred eEEEEEEEeCCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCC
Confidence 99999997511 0 111 12458899999982 1111 1 0
Q ss_pred EE---EEcccCCCCCeeeEEEEecCCC-----CcEEEEeCeeEEecC
Q psy534 106 EL---RISNIRSQDIGDYTCLATHVLY-----PDLLVVLGSFHIHTG 144 (145)
Q Consensus 106 ~L---~i~~v~~~d~G~Y~C~a~n~~g-----~~~~v~~~~~~~~~~ 144 (145)
.+ .+..++.+|+|.|+|.|.|..| ..+.|....+...|+
T Consensus 173 ~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~p~ 219 (222)
T 3sbw_C 173 LFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLAHPPN 219 (222)
T ss_dssp CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC-------
T ss_pred CEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcccCCCC
Confidence 11 2224667899999999999998 344444444544443
No 35
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.57 E-value=2.7e-14 Score=96.95 Aligned_cols=108 Identities=22% Similarity=0.325 Sum_probs=79.6
Q ss_pred ccceeeEEeecCCCc--cEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-------
Q psy534 11 FQMLSVGDFADDEDI--PVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------- 81 (145)
Q Consensus 11 ~~~~~~~~w~~g~p~--p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------- 81 (145)
+.++.+.|-+.+.|. +.+.|++++..... ++. ...+.+|.|.+++.+|+|.|.|.+.+..
T Consensus 18 G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~----~~~-------~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 86 (190)
T 2wv3_A 18 LLPVTLQCNLTSSSHTLMYSYWTKNGVELTA----TRK-------NASNMEYRINKPRAEDSGEYHCVYHFVSAPKANAT 86 (190)
T ss_dssp SSCEEEEEEEEECSSCEEEEEEEETTEECTT----CCB-------CCSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CceEEEEEEeccCCCCceEEEEEECCEECcc----cce-------EeccEEEEEecCCcccCEEEEEEEEeCCcccccEE
Confidence 778899999988776 88999998753211 111 1247899999999999999999996531
Q ss_pred ----CCCC--------CCCCCcEEEEEEeE---------Eec--CC--------------------cEEEEcccC-CCCC
Q psy534 82 ----RSPN--------SHKNGTWFHLDVHG---------VFN--DG--------------------TELRISNIR-SQDI 117 (145)
Q Consensus 82 ----~~~~--------~~~~g~~~~l~c~~---------~~~--~~--------------------~~L~i~~v~-~~d~ 117 (145)
.+|. ....|..+.|.|.. +.. ++ ..|.|.+++ .+|+
T Consensus 87 l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~ 166 (190)
T 2wv3_A 87 IEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDP 166 (190)
T ss_dssp EEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSC
T ss_pred EEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCC
Confidence 0111 12458899999981 111 10 169999999 7999
Q ss_pred eeeEEEEecCCC
Q psy534 118 GDYTCLATHVLY 129 (145)
Q Consensus 118 G~Y~C~a~n~~g 129 (145)
|.|+|.|.|..|
T Consensus 167 G~Y~C~a~N~~g 178 (190)
T 2wv3_A 167 GEYECNATNSIG 178 (190)
T ss_dssp EEEEEEEECSSC
T ss_pred EEEEEEEEecCC
Confidence 999999999999
No 36
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.56 E-value=3.7e-14 Score=111.52 Aligned_cols=115 Identities=23% Similarity=0.300 Sum_probs=83.3
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+..+.+.|-+.|.|.|.+.|+|++... ...-+.++... .....|.|.+++.+|+|.|.|.|.+...
T Consensus 304 ~~g~~~~l~C~~~g~P~p~v~W~k~~~~l-~~~~~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 377 (570)
T 3b43_A 304 KQDEHTRYECKIGGSPEIKVLWYKDETEI-QESSKFRMSFV-----ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSST 377 (570)
T ss_dssp ESSCEEEEEEEEESSSSCEEEEEETTEEC-CCSSSEEEEEE-----TTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEE
T ss_pred cCCCcEEEEEEEeeCCCCEEEEeECCEEC-CCCCcEEEEEE-----CCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEE
Confidence 34566778899999999999999998542 22222233332 2367899999999999999999976421
Q ss_pred ------CC------C--CCCCCcEEEEEEeE---------Eec---------------CC--cEEEEcccCCCCCeeeEE
Q psy534 83 ------SP------N--SHKNGTWFHLDVHG---------VFN---------------DG--TELRISNIRSQDIGDYTC 122 (145)
Q Consensus 83 ------~~------~--~~~~g~~~~l~c~~---------~~~---------------~~--~~L~i~~v~~~d~G~Y~C 122 (145)
+| . ....|..+.|.|.. +.. .+ ..|.|.+++.+|+|.|+|
T Consensus 378 ~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 457 (570)
T 3b43_A 378 SLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQC 457 (570)
T ss_dssp EECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEE
Confidence 11 1 12458999999981 110 11 368899999999999999
Q ss_pred EEecCCC
Q psy534 123 LATHVLY 129 (145)
Q Consensus 123 ~a~n~~g 129 (145)
.|.|.+|
T Consensus 458 ~A~N~~G 464 (570)
T 3b43_A 458 KASNDVG 464 (570)
T ss_dssp EEECSSC
T ss_pred EEEECCC
Confidence 9999999
No 37
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.56 E-value=9.9e-15 Score=103.90 Aligned_cols=121 Identities=17% Similarity=0.296 Sum_probs=87.0
Q ss_pred hhhccceeeEEeec---CCCccEEEEecCCCC---------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFAD---DEDIPVYIWYDSYPT---------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~---g~p~p~~~w~k~~~~---------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+.|-+. +.+.+.+.|+++... .....|++|+.+.. +...++++|.|.+++.+|
T Consensus 17 v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~~L~I~~v~~~D 95 (268)
T 3mj6_A 17 VHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVG-DTFHNDGSLLLQDVQKAD 95 (268)
T ss_dssp EETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECS-CTTTTBCCEEECSCCGGG
T ss_pred EecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEee-cCCCCEEEEEECCCCHhH
Confidence 34567778888877 778888999886532 12244567887643 234567999999999999
Q ss_pred CEEEEEEEEEecC---------------CCC--CCCCCcEEEEEEeE------------Ee-------------------
Q psy534 70 QGWYECKVVFLNR---------------SPN--SHKNGTWFHLDVHG------------VF------------------- 101 (145)
Q Consensus 70 ~G~Y~C~~~~~~~---------------~~~--~~~~g~~~~l~c~~------------~~------------------- 101 (145)
+|.|+|.+.+... .+. ....|+.+.|.|.. +.
T Consensus 96 ~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 175 (268)
T 3mj6_A 96 EGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNM 175 (268)
T ss_dssp CEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTS
T ss_pred CEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCC
Confidence 9999999965321 111 12458888898872 11
Q ss_pred ----------------------cCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 ----------------------NDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ----------------------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.....|.|.+++.+|+|.|+|.|.|..|
T Consensus 176 ~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 225 (268)
T 3mj6_A 176 RSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKL 225 (268)
T ss_dssp SSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTE
T ss_pred CccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCc
Confidence 1134799999999999999999999887
No 38
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.56 E-value=1.6e-14 Score=100.50 Aligned_cols=116 Identities=15% Similarity=0.104 Sum_probs=79.8
Q ss_pred hccceeeEEeec-CCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 10 IFQMLSVGDFAD-DEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 10 ~~~~~~~~~w~~-g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
.+..+.+.|-.. +.|.|.+.|++++.. +...-+.++.. +...+..+|.|.+++.+|+|.|+|.+.+...
T Consensus 16 eg~~v~l~c~~~~~~P~p~i~W~kng~~-l~~~~~~~~~~---~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~~ 91 (207)
T 3rbs_A 16 EKGQVRFWMQAEKLSGNAKVNYIFNEKE-IFEGPKYKMHI---DRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTV 91 (207)
T ss_dssp GGGCEEEEEECSCCCSCCEEEEEETTEE-ECSSSSCEEEE---CTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eCCeEEEEEEEecCCCCCEEEEEECCEE-CccCCCEEEEE---eCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEEE
Confidence 445666777765 579999999999864 32222223332 1123456899999999999999997754110
Q ss_pred -------------------------CCC-------CCCCCcEEEEEEeE----------Ee--------------cCC-c
Q psy534 83 -------------------------SPN-------SHKNGTWFHLDVHG----------VF--------------NDG-T 105 (145)
Q Consensus 83 -------------------------~~~-------~~~~g~~~~l~c~~----------~~--------------~~~-~ 105 (145)
+|. ....|..+.|.|.. ++ ..+ .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~~~~~~ 171 (207)
T 3rbs_A 92 VLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGIC 171 (207)
T ss_dssp EECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCCSSEEE
T ss_pred EEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEcCCCEE
Confidence 110 12358899999981 00 111 2
Q ss_pred EEEEcccCCCCCeeeEEEEecCCC
Q psy534 106 ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 106 ~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|.|.+++.+|+|.|+|.|.|.+|
T Consensus 172 ~L~I~~v~~~D~G~Y~C~a~N~~G 195 (207)
T 3rbs_A 172 TLLITEFSKKDAGIYEVILKDDRG 195 (207)
T ss_dssp EEEETTCCGGGCEEEEEEEEETTE
T ss_pred EEEECCCCcccCEEEEEEEEcCCC
Confidence 599999999999999999999999
No 39
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.56 E-value=4.8e-15 Score=99.84 Aligned_cols=106 Identities=16% Similarity=0.209 Sum_probs=78.5
Q ss_pred hhhccceeeEEeecCCCccE-EEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 8 KSIFQMLSVGDFADDEDIPV-YIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~-~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
...+.++.+.|-+.+.|.+. +.|++++... . ....+|.|.+++.+|+|.|.|.+.+...
T Consensus 19 v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~-----------~-----~~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~ 82 (175)
T 1fnl_A 19 VLEKDSVTLKCQGAYSPEDNSTQWFHNESLI-----------S-----SQASSYFIDAATVNDSGEYRCQTNLSTLSDPV 82 (175)
T ss_dssp EETTCCEEEEEECCCBTTBCCCEEEETTEEE-----------E-----SSCSEEEESSCCGGGCEEEEEECSSSCCCCCE
T ss_pred eeCCCcEEEEeeCCCCCCCcceEEEECCEEc-----------c-----CCceEEEEeCCCcccCEEEEEEeeCCcccccE
Confidence 34566788889988887776 7899987431 1 2377999999999999999999853211
Q ss_pred ------------CCC-CCCCCcEEEEEEeE----------E---------ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 ------------SPN-SHKNGTWFHLDVHG----------V---------FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 ------------~~~-~~~~g~~~~l~c~~----------~---------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.+. ....|+.+.|.|.. + ...+..|.|.+++.+|+|.|+|.|.|..+
T Consensus 83 ~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 161 (175)
T 1fnl_A 83 QLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSK 161 (175)
T ss_dssp EEEEECSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEEeCCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChhhCeEEEEEEEcCCC
Confidence 111 12358999999971 1 11234799999999999999999999765
No 40
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.56 E-value=2.7e-15 Score=101.72 Aligned_cols=115 Identities=12% Similarity=0.101 Sum_probs=75.0
Q ss_pred hhccceeeEEeec--CCCccEEEEecCCCCcc-------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFAD--DEDIPVYIWYDSYPTHE-------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~--g~p~p~~~w~k~~~~~~-------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+.++.+-|... +.+.+.+.|+|++.... .....+|..+. .+++|.|.+++.+|+|.|.|.+.+
T Consensus 9 ~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~------~~gsL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 9 ALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL------ANGDLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp ETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEEC------TTSCEEESSCCGGGCEEEEEEEEE
T ss_pred EcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEEC------CCCcEEEcccccccCEEEEEEEEe
Confidence 3455666666332 25677888988863211 01124566662 367799999999999999999965
Q ss_pred ecC--------------CC-CC--CCCCcEEEEEEeE---------EecCC------cEEEEcccCCCCCeeeEEEEecC
Q psy534 80 LNR--------------SP-NS--HKNGTWFHLDVHG---------VFNDG------TELRISNIRSQDIGDYTCLATHV 127 (145)
Q Consensus 80 ~~~--------------~~-~~--~~~g~~~~l~c~~---------~~~~~------~~L~i~~v~~~d~G~Y~C~a~n~ 127 (145)
... ++ .+ ...+..+.|.|.. +..++ ..+.|..++.+|+|.|+|.|.|.
T Consensus 83 ~~g~~~~~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~~~~~~d~G~Y~C~a~N~ 162 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNR 162 (176)
T ss_dssp TTCCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEEEEEEET
T ss_pred CCCCEEEEEEEEEEEeCCCCCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEEEEEccCCeEEEEEEEec
Confidence 321 11 11 1224458899971 12222 13567788999999999999999
Q ss_pred CC
Q psy534 128 LY 129 (145)
Q Consensus 128 ~g 129 (145)
+|
T Consensus 163 ~g 164 (176)
T 1hng_A 163 VS 164 (176)
T ss_dssp TE
T ss_pred CC
Confidence 98
No 41
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.56 E-value=1.7e-14 Score=97.98 Aligned_cols=105 Identities=13% Similarity=0.190 Sum_probs=78.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|.+.+ +.+.+.|+|++.. .. ....+|.|.+++.+|+|.|+|.+.+..
T Consensus 19 v~~G~~v~L~C~~~~-~~~~~~W~k~g~~----------~~------~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 81 (184)
T 2gi7_A 19 VPLEKPVTLRCQGPP-GVDLYRLEKLSSS----------RY------QDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPS 81 (184)
T ss_dssp EETTCCEEEEEECST-TCSEEEEEETTTC----------CE------ESSSEEEESSCCGGGCEEEEEEEEETTEEBCCC
T ss_pred ccCCCcEEEEEeCCC-CCCEEEEEECCcc----------cc------CcccEEEECcCChhhCceEEEEEEcCCCccCCC
Confidence 456778889999888 7789999998743 01 237889999999999999999997621
Q ss_pred ------C-----C------CC-CCCCCcEEEEEEeE--------Eec-------------CCcEEEEcccCCCCCeeeEE
Q psy534 82 ------R-----S------PN-SHKNGTWFHLDVHG--------VFN-------------DGTELRISNIRSQDIGDYTC 122 (145)
Q Consensus 82 ------~-----~------~~-~~~~g~~~~l~c~~--------~~~-------------~~~~L~i~~v~~~d~G~Y~C 122 (145)
+ . +. ....|+.+.|.|.. ... .+..|.|.+++.+|+|.|+|
T Consensus 82 ~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 161 (184)
T 2gi7_A 82 DQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGFDQFALYKEGDPAPYKNPERWYRASFPIITVTAAHSGTYRC 161 (184)
T ss_dssp CCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCCCEEEEEECCCCTTSCCCCEEEEESSSEEEETTCCSEEEEE
T ss_pred CCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCCcEEEEEECCCcCcceecCCCceEEEEEccCCccCCeEEEE
Confidence 0 0 11 13459999999982 111 12357899999999999999
Q ss_pred EEecCCC
Q psy534 123 LATHVLY 129 (145)
Q Consensus 123 ~a~n~~g 129 (145)
.|.|..+
T Consensus 162 ~a~n~~~ 168 (184)
T 2gi7_A 162 YSFSSRD 168 (184)
T ss_dssp EEECTTS
T ss_pred EEEeCCC
Confidence 9999854
No 42
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.56 E-value=1.3e-14 Score=98.37 Aligned_cols=116 Identities=17% Similarity=0.217 Sum_probs=82.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
...+.++.+.|-+.|.|.+.+.|++++... .. ..+..+..+ ....+|.|.+++.+|+|.|+|.+.+...
T Consensus 19 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-~~--~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 92 (197)
T 3lcy_A 19 TKLGEAAQLSCQIVGRPLPDIKWYRFGKEL-IQ--SRKYKMSSD---GRTHTLTVMTEEQEDEGVYTCIATNEVGEVETS 92 (197)
T ss_dssp EETTSEEEEEEEEEEESCCEEEEEETTEEE-CC--CSSEEEEES---SSEEEEEEECCSGGGCEEEEEEEECSSCEEEEE
T ss_pred EeCCCcEEEEEEEecCCCCEEEEEECCEEC-CC--CccEEEEeC---CCEEEEEEecCCccCCEEEEEEEECCCCceeEE
Confidence 345778888999989999999999987542 11 233333221 2356899999999999999999964320
Q ss_pred -----------CCC---C----CCCCcEEEEEEeE---------Ee---------------cC--CcEEEEcccCC-CCC
Q psy534 83 -----------SPN---S----HKNGTWFHLDVHG---------VF---------------ND--GTELRISNIRS-QDI 117 (145)
Q Consensus 83 -----------~~~---~----~~~g~~~~l~c~~---------~~---------------~~--~~~L~i~~v~~-~d~ 117 (145)
.+. . ...|..+.|.|.. +. .. ...|.|.++.. +|+
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~ 172 (197)
T 3lcy_A 93 SKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHA 172 (197)
T ss_dssp EEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHC
T ss_pred EEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhC
Confidence 111 0 1348899999981 00 01 14689999984 899
Q ss_pred eeeEEEEecCCC
Q psy534 118 GDYTCLATHVLY 129 (145)
Q Consensus 118 G~Y~C~a~n~~g 129 (145)
|.|+|.|.|..|
T Consensus 173 G~Y~C~a~n~~g 184 (197)
T 3lcy_A 173 GKYKVQLSNVFG 184 (197)
T ss_dssp EEEEEEEECSSC
T ss_pred ceEEEEEEcCcC
Confidence 999999999998
No 43
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.56 E-value=2.9e-14 Score=97.64 Aligned_cols=114 Identities=12% Similarity=0.121 Sum_probs=76.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|.+.+.|. .+.|||++.... .....+ . ......+|.|.+++.+|+|.|+|.+.+..
T Consensus 16 v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~-~~~~~~-~-----~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s 87 (196)
T 2d3v_A 16 ISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEP-WDTQNP-L-----EPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPS 87 (196)
T ss_dssp EETTCCEEEEEECCTTCC-EEEEEETTCSSC-SEEECC-C-----SSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCC
T ss_pred ccCCCeEEEEEeCCCCCc-EEEEEECCCCCC-cccccc-c-----CCccccEEEeccCChhHCeEEEEEEeCCCCcCCcC
Confidence 346778889999888776 899999985421 111100 0 12347899999999999999999995421
Q ss_pred ------C-----CC-------CCCCCCcEEEEEEeE--------E---------------e-cCC---cEEEEcccCCCC
Q psy534 82 ------R-----SP-------NSHKNGTWFHLDVHG--------V---------------F-NDG---TELRISNIRSQD 116 (145)
Q Consensus 82 ------~-----~~-------~~~~~g~~~~l~c~~--------~---------------~-~~~---~~L~i~~v~~~d 116 (145)
+ .+ .....|+.+.|.|.. + . ..+ ..|.|.+++.+|
T Consensus 88 ~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 167 (196)
T 2d3v_A 88 DPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRFDRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSH 167 (196)
T ss_dssp CCEEEEEECSSCCCEEEC-----------CEEEEEESSCCSEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTB
T ss_pred ccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCCCEEEEEccCCcccccccccccccCCCceeEEEeeecCccc
Confidence 0 01 012458899999981 0 0 111 479999999999
Q ss_pred CeeeEEEEecCCC
Q psy534 117 IGDYTCLATHVLY 129 (145)
Q Consensus 117 ~G~Y~C~a~n~~g 129 (145)
+|.|+|.|.|..+
T Consensus 168 ~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 168 RWMLRCYGSRRHI 180 (196)
T ss_dssp CEEEEEEEEETTE
T ss_pred CeeEEEEEEccCC
Confidence 9999999999754
No 44
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.55 E-value=4.8e-15 Score=99.86 Aligned_cols=106 Identities=19% Similarity=0.251 Sum_probs=77.2
Q ss_pred hhhccceeeEEeecCCCcc-EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 8 KSIFQMLSVGDFADDEDIP-VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p-~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
...+.++.+.|.+.+.|.+ .+.|++++... ...+.+|.|.+++.+|+|.|+|.+.+...
T Consensus 16 v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~----------------~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~ 79 (176)
T 1f2q_A 16 IFKGENVTLTCNGNNFFEVSSTKWFHNGSLS----------------EETNSSLNIVNAKFEDSGEYKCQHQQVNESEPV 79 (176)
T ss_dssp EETTCCEEEECCTTCC----CCEEEETTEEC----------------SCCSSEEEECSCCGGGCEEEEEECTTSSCCCCE
T ss_pred eecCCcEEEEEeCCCCCCcceEEEEECCeEC----------------CCCceEEEEeccceecCEEEEEEcCCccccccE
Confidence 3466788889988888775 58999987431 12378899999999999999999843221
Q ss_pred -------------CCCCCCCCcEEEEEEeE----------Ee---------cCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 -------------SPNSHKNGTWFHLDVHG----------VF---------NDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 -------------~~~~~~~g~~~~l~c~~----------~~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+......|+.+.|.|.. +. ..+..|.|.+++.+|+|.|+|.|.|..+
T Consensus 80 ~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 158 (176)
T 1f2q_A 80 YLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKVWQL 158 (176)
T ss_dssp EEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEEeCcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcccCEEEEEEEEeCCc
Confidence 11123468999999982 01 1345899999999999999999999754
No 45
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.55 E-value=1.4e-14 Score=107.95 Aligned_cols=112 Identities=20% Similarity=0.230 Sum_probs=81.2
Q ss_pred ccceeeEEeecCCCccEEEEecCCCCcc---cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 11 FQMLSVGDFADDEDIPVYIWYDSYPTHE---AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 11 ~~~~~~~~w~~g~p~p~~~w~k~~~~~~---~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
+.++.+.|-+.|.|.|.+.|++++.... ......|+.. .+++|.|.+++.+|+|.|.|.+.+...
T Consensus 227 G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 299 (388)
T 2v5m_A 227 AHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ-------VSGTLIIKDAVVEDSGKYLCVVNNSVGGESVE 299 (388)
T ss_dssp TSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE-------ETTEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceec-------ccCEEEECcCCHHHCeEEEEEEecCCCceeEE
Confidence 4566777888899999999999753211 1112233332 267899999999999999999965321
Q ss_pred -------C------C--CCCCCCcEEEEEEeE---------E-------ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 -------S------P--NSHKNGTWFHLDVHG---------V-------FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 -------~------~--~~~~~g~~~~l~c~~---------~-------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ + .....|+.+.|.|.. + ...+..|.|.+++.+|+|.|+|.|.|..|
T Consensus 300 ~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 377 (388)
T 2v5m_A 300 TVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRE 377 (388)
T ss_dssp EEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSC
T ss_pred EEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccCCCEEEEecCChhhCEEEEEEEEcCCC
Confidence 1 1 113468999999982 1 12345899999999999999999999999
No 46
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.55 E-value=6e-14 Score=101.45 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=83.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|-+.|.|.+.+.|++++....... .+..+... ..+..+|.|.+++.+|+|.|+|.+.+..
T Consensus 16 v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 91 (305)
T 2nzi_A 16 VRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG--LKYRIQEF--KGGYHQLIIASVTDDDATVYQVRATNQGGSVSGT 91 (305)
T ss_dssp ECTTCCEEEEEEEECSSCCEEEEEETTEECCCCS--SSEEEEEE--TTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEE
T ss_pred EeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCC--CeEEEEEC--CCCEEEEEEccCChhhCeEEEEEEEcCCCCccce
Confidence 3456788899999999999999999875422211 22322110 1235699999999999999999996532
Q ss_pred ----C--C-----C------C--CCCCCcEEEEEEeE---------Ee-----------------cCCcEEEEcc-cCCC
Q psy534 82 ----R--S-----P------N--SHKNGTWFHLDVHG---------VF-----------------NDGTELRISN-IRSQ 115 (145)
Q Consensus 82 ----~--~-----~------~--~~~~g~~~~l~c~~---------~~-----------------~~~~~L~i~~-v~~~ 115 (145)
+ + + . ....|..+.|.|.. +. .....|.|.+ ++.+
T Consensus 92 ~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 171 (305)
T 2nzi_A 92 ASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERK 171 (305)
T ss_dssp EEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCST
T ss_pred EEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccC
Confidence 0 0 1 0 12348899999981 00 0123688988 9999
Q ss_pred CCeeeEEEEecCCC
Q psy534 116 DIGDYTCLATHVLY 129 (145)
Q Consensus 116 d~G~Y~C~a~n~~g 129 (145)
|+|.|+|.|.|..|
T Consensus 172 d~G~Y~C~a~N~~G 185 (305)
T 2nzi_A 172 DAGFYVVCAKNRFG 185 (305)
T ss_dssp TCEEEEEEEEETTE
T ss_pred ccEEEEEEEEeCCC
Confidence 99999999999998
No 47
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.55 E-value=5.3e-14 Score=110.65 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=83.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------- 81 (145)
..+.++.+.|-+.|.|.|.+.|+|++.. +...-+.++... ....+|.|.+++.+|+|.|.|.|.+..
T Consensus 210 ~~G~~~~l~C~~~g~p~p~i~W~k~g~~-i~~~~~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 283 (570)
T 3b43_A 210 ALGESGTFKCHVTGTAPIKITWAKDNRE-IRPGGNYKMTLV-----ENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSA 283 (570)
T ss_dssp BSBSCEEEEEEEESSSCCEEEEEETTEE-CCTTSSEEEEEE-----TTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCCCeEEEEEEEEECCCCEEEEEECCEE-CcCCCcEEEEEE-----CCEEEEEEcccCcccCEEEEEEEECCCCcEEEEE
Confidence 3566778889999999999999999854 222222233332 236889999999999999999996632
Q ss_pred ---C--CC------C---CCCCCcEEEEEEeE---------Ee-----------------cCCcEEEEcccCCCCCeeeE
Q psy534 82 ---R--SP------N---SHKNGTWFHLDVHG---------VF-----------------NDGTELRISNIRSQDIGDYT 121 (145)
Q Consensus 82 ---~--~~------~---~~~~g~~~~l~c~~---------~~-----------------~~~~~L~i~~v~~~d~G~Y~ 121 (145)
+ +| . ....|+.+.|.|.. +. .....|.|.+++.+|+|.|+
T Consensus 284 ~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 363 (570)
T 3b43_A 284 QLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYT 363 (570)
T ss_dssp EECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred EEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEE
Confidence 1 11 1 12358899999981 00 11236899999999999999
Q ss_pred EEEecCCC
Q psy534 122 CLATHVLY 129 (145)
Q Consensus 122 C~a~n~~g 129 (145)
|.|.|..|
T Consensus 364 C~a~N~~g 371 (570)
T 3b43_A 364 CEAHNAAG 371 (570)
T ss_dssp EEEEBTTB
T ss_pred EEEEeCCC
Confidence 99999998
No 48
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.55 E-value=8.2e-14 Score=96.02 Aligned_cols=121 Identities=15% Similarity=0.037 Sum_probs=85.0
Q ss_pred hhhccceeeEEeecCC-------CccEEEEecCCCCc--------------ccccccceEEEecCCCCCCeeeEEEcccC
Q psy534 8 KSIFQMLSVGDFADDE-------DIPVYIWYDSYPTH--------------EAEEYKGRISRVDKESPFGMASLNLTKIR 66 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~-------p~p~~~w~k~~~~~--------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~ 66 (145)
+..+.++.+-|.+.+. +.+.+.|||++... ....+.+|+.+..+ ...++++|.|.+++
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~sL~I~~v~ 90 (214)
T 2zg1_A 12 VQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGD-VQKKNCSLSIGDAR 90 (214)
T ss_dssp EETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSC-GGGTBCCEEECSCC
T ss_pred EecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEecc-CCCCeEEEEEccCC
Confidence 4567788888887754 67889999886420 12345678877432 22357799999999
Q ss_pred CCCCEEEEEEEEEec--------C--------C--------CCCCCCCcEEEEEEeE-------------Ee--------
Q psy534 67 ESDQGWYECKVVFLN--------R--------S--------PNSHKNGTWFHLDVHG-------------VF-------- 101 (145)
Q Consensus 67 ~~D~G~Y~C~~~~~~--------~--------~--------~~~~~~g~~~~l~c~~-------------~~-------- 101 (145)
.+|+|.|.|.+.+.. . . +.....|+.+.|.|.. +.
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~ 170 (214)
T 2zg1_A 91 MEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLD 170 (214)
T ss_dssp GGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSC
T ss_pred HhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCC
Confidence 999999999986532 0 1 1113458899999982 01
Q ss_pred ---cCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 ---NDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.....|.|..+..+|.|.|+|.|.|..+
T Consensus 171 ~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~ 201 (214)
T 2zg1_A 171 PETTRSSELTLTPRPEDHGTNLTCQMKRQGA 201 (214)
T ss_dssp SSCCCSSEEEECCCTTCCSCEEEEEEECC--
T ss_pred CCceeEEEEEEecccHHcCcEEEEEEEeCCC
Confidence 1235799999999999999999999864
No 49
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.55 E-value=8.5e-14 Score=95.68 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=79.5
Q ss_pred hhhccceeeEEeecCCCcc---EEEEecCCCCccc-------------ccccceEEEecC----CCCCCeeeEEEcccCC
Q psy534 8 KSIFQMLSVGDFADDEDIP---VYIWYDSYPTHEA-------------EEYKGRISRVDK----ESPFGMASLNLTKIRE 67 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p---~~~w~k~~~~~~~-------------~~~~~R~~~~~~----~~~~~~~sL~I~~v~~ 67 (145)
+.++..+.+-|.+.+.+.+ .+.|+|++..... ....+|..+... .....+++|.|.+++.
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~ 92 (225)
T 4fmk_A 13 GRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLRV 92 (225)
T ss_dssp EETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCCG
T ss_pred EecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCCH
Confidence 4567888888998876654 4789998643211 112334333211 1223478899999999
Q ss_pred CCCEEEEEEEEEecC-------------CC--------CCCCCCcEEEEEEeE----------E---------------e
Q psy534 68 SDQGWYECKVVFLNR-------------SP--------NSHKNGTWFHLDVHG----------V---------------F 101 (145)
Q Consensus 68 ~D~G~Y~C~~~~~~~-------------~~--------~~~~~g~~~~l~c~~----------~---------------~ 101 (145)
+|+|.|.|.+.+... ++ .....+....+.|.. . .
T Consensus 93 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~~ 172 (225)
T 4fmk_A 93 EDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGI 172 (225)
T ss_dssp GGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEEECS
T ss_pred HHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcceEEe
Confidence 999999999965321 11 122345566666651 0 0
Q ss_pred cCC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 NDG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.++ +.|.|.+++.+|+|.|+|.|+|..+
T Consensus 173 ~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~ 205 (225)
T 4fmk_A 173 QAGTVTIISRYSLVPVGRADGVKVTCRVEHESF 205 (225)
T ss_dssp STTCEEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred cCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCC
Confidence 111 2599999999999999999999987
No 50
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.54 E-value=1.4e-14 Score=108.35 Aligned_cols=112 Identities=16% Similarity=0.120 Sum_probs=82.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|.+.|.|.|.+.|++++..... . +.... ..+.+|.|.+++.+|+|.|+|.+.+...
T Consensus 235 ~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~-~---~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 305 (404)
T 3p3y_A 235 LRGMDLLLECIASGVPTPDIAWYKKGGDLPS-D---KAKFE-----NFNKALRITNVSEEDSGEYFCLASNKMGSIRHTI 305 (404)
T ss_dssp ETTSCEEEECCBCCSSCCEEEEEETTBCCCT-T---TEEEE-----GGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred ecCCCEEEEEEECCCCCCcEEEEECCEECCC-C---ccccc-----ccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEE
Confidence 3566788889888999999999999854221 1 11221 2367899999999999999999965321
Q ss_pred ------------CCC--CCCCCcEEEEEEeE---------Ee----------------cCCcEEEEcccCCCCCeeeEEE
Q psy534 83 ------------SPN--SHKNGTWFHLDVHG---------VF----------------NDGTELRISNIRSQDIGDYTCL 123 (145)
Q Consensus 83 ------------~~~--~~~~g~~~~l~c~~---------~~----------------~~~~~L~i~~v~~~d~G~Y~C~ 123 (145)
.+. ....|+.+.|.|.. +. ..+..|.|.+++.+|+|.|+|.
T Consensus 306 ~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 385 (404)
T 3p3y_A 306 SVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCN 385 (404)
T ss_dssp EEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEE
T ss_pred EEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEE
Confidence 111 13458999999981 00 1234799999999999999999
Q ss_pred EecCCC
Q psy534 124 ATHVLY 129 (145)
Q Consensus 124 a~n~~g 129 (145)
|.|..|
T Consensus 386 a~N~~G 391 (404)
T 3p3y_A 386 TSNEHG 391 (404)
T ss_dssp EEETTE
T ss_pred EEeCCC
Confidence 999998
No 51
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.54 E-value=8.7e-14 Score=103.73 Aligned_cols=117 Identities=23% Similarity=0.306 Sum_probs=86.1
Q ss_pred hhccceeeEEeecCCCccEEEEecC--CCCcccc---cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDS--YPTHEAE---EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~--~~~~~~~---~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~- 82 (145)
..+.++.+.|-+.|.|.|.+.|+|+ +.. +.. ...+|+.+... ..+++|.|.+++.+|+|.|.|.+.+...
T Consensus 13 ~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~-~~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 88 (389)
T 2jll_A 13 YENGQVTLVCDAEGEPIPEITWKRAVDGFT-FTEGDKSLDGRIEVKGQ---HGSSSLHIKDVKLSDSGRYDCEAASRIGG 88 (389)
T ss_dssp ETTSEEEEEEEEECSSCCEEEEEETTTTEE-ECC--CCSSSSEEEEEC---SSEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred eCCCeEEEEEEeecccCCeEEEEeCCCCce-eccCcCCCCCeEEEecc---CCcceEEEcccChhhCEEEEEEEEeCCCC
Confidence 3477889999999999999999998 422 221 12456665321 3578999999999999999999965321
Q ss_pred -----------------CCC--CCCCCcEEEEEEeE---------E------ec-------------CCcEEEEcccCCC
Q psy534 83 -----------------SPN--SHKNGTWFHLDVHG---------V------FN-------------DGTELRISNIRSQ 115 (145)
Q Consensus 83 -----------------~~~--~~~~g~~~~l~c~~---------~------~~-------------~~~~L~i~~v~~~ 115 (145)
.+. ....|+.+.|.|.. + .. ....|.|.+++.+
T Consensus 89 ~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~ 168 (389)
T 2jll_A 89 HQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDN 168 (389)
T ss_dssp EEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTT
T ss_pred cceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChh
Confidence 111 12458999999981 0 00 1235999999999
Q ss_pred CCeeeEEEEecCCC
Q psy534 116 DIGDYTCLATHVLY 129 (145)
Q Consensus 116 d~G~Y~C~a~n~~g 129 (145)
|+|.|+|.|.|..|
T Consensus 169 d~G~Y~C~a~N~~G 182 (389)
T 2jll_A 169 DFGRYNCTATNHIG 182 (389)
T ss_dssp SSEEEEEEEEETTE
T ss_pred hCEEEEEEEEcCCC
Confidence 99999999999998
No 52
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.54 E-value=3.3e-14 Score=94.83 Aligned_cols=106 Identities=14% Similarity=0.171 Sum_probs=78.7
Q ss_pred hhhccceeeEEeecCCC-ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 8 KSIFQMLSVGDFADDED-IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p-~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
...+.++.+.|.+.+.| .+.+.|++++... . .....+.|.+++.+|+|.|.|.+.+...
T Consensus 16 v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~-~---------------~~~~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~ 79 (170)
T 3ry4_A 16 VLQEDSVTLTCQGARSPESDSIQWFHNGNLI-P---------------THTQPSYRFKANNNDSGEYTCQTGQTSLSDPV 79 (170)
T ss_dssp EETTCEEEEEEESCCCSSSSCEEEEETTEEC-T---------------TCCSSEEEEECCGGGCEEEEEEETTSBCCCCE
T ss_pred EECCCcEEEEEEecCCCCcceEEEEECCeEc-c---------------cCccceEEEecccccCeEEEEEEeCCCceEeE
Confidence 34567788899999886 6789999987431 1 1255677889999999999999943211
Q ss_pred ------------CCC-CCCCCcEEEEEEeE-------------------EecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 ------------SPN-SHKNGTWFHLDVHG-------------------VFNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 ------------~~~-~~~~g~~~~l~c~~-------------------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.+. ....|+.+.|.|.. ....+..|.|.+++.+|+|.|+|.|.|..|
T Consensus 80 ~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 158 (170)
T 3ry4_A 80 HLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYT 158 (170)
T ss_dssp EEEEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccCCEEEEEEEEeCcC
Confidence 111 13468899999982 012345899999999999999999999987
No 53
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.54 E-value=5.4e-14 Score=97.15 Aligned_cols=119 Identities=18% Similarity=0.219 Sum_probs=81.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccc-cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAE-EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~-~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
...+.++.+.|-+.|.|.+.+.|++++...... ....|+.+.. ......|.|.+++.+|+|.|+|.+.+...
T Consensus 21 v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~---~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~ 97 (217)
T 2vr9_A 21 VKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKD---GALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVS 97 (217)
T ss_dssp ECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTT---SCEEESSCCBSSSCBCCEEEEEEEEETTEEEEC
T ss_pred EeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecC---CceEEEEEeccCCcccCceEEEEEecCCCcccc
Confidence 345677888899989999999999987532211 1223333210 01122347889999999999999965210
Q ss_pred ----------CCC--------CCCCCcEEEEEEeE----------E------e----------------cCCcEEEEccc
Q psy534 83 ----------SPN--------SHKNGTWFHLDVHG----------V------F----------------NDGTELRISNI 112 (145)
Q Consensus 83 ----------~~~--------~~~~g~~~~l~c~~----------~------~----------------~~~~~L~i~~v 112 (145)
++. ....|..+.|.|.. + . ..+..|.|.++
T Consensus 98 ~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 177 (217)
T 2vr9_A 98 RHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNV 177 (217)
T ss_dssp CCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSC
T ss_pred ccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeC
Confidence 111 12458899999961 0 0 12247999999
Q ss_pred CCCCCeeeEEEEecCCC
Q psy534 113 RSQDIGDYTCLATHVLY 129 (145)
Q Consensus 113 ~~~d~G~Y~C~a~n~~g 129 (145)
+.+|+|.|+|.|+|..|
T Consensus 178 ~~~d~G~Y~C~a~N~~G 194 (217)
T 2vr9_A 178 EPIDEGNYKCIAQNLVG 194 (217)
T ss_dssp CSTTCEEEEEEEEETTE
T ss_pred CHHHCeEEEEEEEcccc
Confidence 99999999999999998
No 54
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.54 E-value=4.4e-14 Score=105.70 Aligned_cols=124 Identities=19% Similarity=0.286 Sum_probs=88.3
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|.+.|.|.+.+.|++++..........+... ..+++|.|.+++.+|+|.|+|.+.+...
T Consensus 134 ~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 207 (403)
T 3laf_A 134 FMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVV------LPSGALQISRLQPGDSGVYRCSARNPASTRTGNE 207 (403)
T ss_dssp ETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEE------CTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCC
T ss_pred EcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEE------cCCceEEEcccccccCEEEEEEEEcCCCceeccc
Confidence 3466778888888999999999999864322223344444 2367899999999999999999975321
Q ss_pred -------CCC--------------CCCCCcEEEEEEeEE------------------------ecCCcEEEEcccCCCCC
Q psy534 83 -------SPN--------------SHKNGTWFHLDVHGV------------------------FNDGTELRISNIRSQDI 117 (145)
Q Consensus 83 -------~~~--------------~~~~g~~~~l~c~~~------------------------~~~~~~L~i~~v~~~d~ 117 (145)
.+. ....|+.+.|.|... ...+..|.|.+++.+|+
T Consensus 208 ~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 287 (403)
T 3laf_A 208 AEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDS 287 (403)
T ss_dssp EEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGC
T ss_pred eeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHC
Confidence 110 022588999999810 11234799999999999
Q ss_pred eeeEEEEecCCC-----CcEEEEeCe
Q psy534 118 GDYTCLATHVLY-----PDLLVVLGS 138 (145)
Q Consensus 118 G~Y~C~a~n~~g-----~~~~v~~~~ 138 (145)
|.|+|.|.|..| ..+.|....
T Consensus 288 G~Y~C~a~n~~g~~~~~~~l~V~~~p 313 (403)
T 3laf_A 288 GTYTCVVTYKNENISASAELTVLVPP 313 (403)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEcCCCceEEEEEEEEECCC
Confidence 999999999987 455554433
No 55
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.54 E-value=4.2e-14 Score=102.54 Aligned_cols=112 Identities=21% Similarity=0.343 Sum_probs=78.8
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-------
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------- 82 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------- 82 (145)
.+.++.+.|-+.|.|.|.+.|++++..........|+.. ..+++|.|.+++.+|+|.|.|.+.+...
T Consensus 122 ~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 195 (304)
T 2yd9_A 122 RTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ------LRSGALQIESSEETDQGKYECVATNSAGVRYSSPA 195 (304)
T ss_dssp TTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE------CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred CCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe------CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccE
Confidence 456777888888999999999999754322223345544 2366999999999999999999965310
Q ss_pred ---------------CCC--CCCCCcEEEEEEeE---------EecC-----------CcE--EEEcccCCCCCeeeEEE
Q psy534 83 ---------------SPN--SHKNGTWFHLDVHG---------VFND-----------GTE--LRISNIRSQDIGDYTCL 123 (145)
Q Consensus 83 ---------------~~~--~~~~g~~~~l~c~~---------~~~~-----------~~~--L~i~~v~~~d~G~Y~C~ 123 (145)
.+. ....|+.+.|.|.. +..+ ... |.|.++ +|+|.|+|.
T Consensus 196 ~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~ 273 (304)
T 2yd9_A 196 NLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCV 273 (304)
T ss_dssp EEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEE
T ss_pred EEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEE
Confidence 111 23568999999982 1111 113 555554 699999999
Q ss_pred EecCCC
Q psy534 124 ATHVLY 129 (145)
Q Consensus 124 a~n~~g 129 (145)
|.|..|
T Consensus 274 a~N~~G 279 (304)
T 2yd9_A 274 AMSSLG 279 (304)
T ss_dssp EEETTE
T ss_pred EEeCCC
Confidence 999998
No 56
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=1.8e-14 Score=105.54 Aligned_cols=115 Identities=25% Similarity=0.311 Sum_probs=81.2
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec--------
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN-------- 81 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~-------- 81 (145)
.+.++.+.|.+.|.|.|.+.|++++............. ......+|.|.+++.+|+|.|.|.+.+..
T Consensus 137 ~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~-----~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 211 (334)
T 1ry7_B 137 AANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIK-----LRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYT 211 (334)
T ss_dssp TTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCC-----CCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEEccCCCCCeEEEEECCEECccccccccee-----cccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEE
Confidence 46677888988899999999999875422111111111 12347789999999999999999996531
Q ss_pred -----CC---CCC---------CCCCcEEEEEEeE---------Eec-----------CC-------------------c
Q psy534 82 -----RS---PNS---------HKNGTWFHLDVHG---------VFN-----------DG-------------------T 105 (145)
Q Consensus 82 -----~~---~~~---------~~~g~~~~l~c~~---------~~~-----------~~-------------------~ 105 (145)
.+ +.. ...|+.+.|.|.. +.. ++ .
T Consensus 212 l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (334)
T 1ry7_B 212 LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELE 291 (334)
T ss_dssp EEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCC
T ss_pred EEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccccc
Confidence 01 100 1248889999971 111 00 1
Q ss_pred EEEEcccCCCCCeeeEEEEecCCC
Q psy534 106 ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 106 ~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|.|.+++.+|+|.|+|.|.|..|
T Consensus 292 ~L~i~~v~~~d~G~Y~C~a~N~~G 315 (334)
T 1ry7_B 292 VLSLHNVTFEDAGEYTCLAGNSIG 315 (334)
T ss_dssp CEEECSCCTTSCSEEEEEEEESSC
T ss_pred EEEEccCCHHHCEEEEEEEeCCCC
Confidence 699999999999999999999999
No 57
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.53 E-value=6.7e-14 Score=94.17 Aligned_cols=116 Identities=16% Similarity=0.198 Sum_probs=80.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
...+.++.+.|-+.|.|.+.+.|++++.. +... .+..+... ......+|.|.+++.+|+|.|.|.+.+...
T Consensus 14 v~~G~~v~l~C~~~~~p~~~v~W~k~~~~-~~~~--~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 89 (182)
T 1rhf_A 14 VSQGQPVKLNCSVEGMEEPDIQWVKDGAV-VQNL--DQLYIPVS-EQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQ 89 (182)
T ss_dssp EETTCCEEEEEEEESCSSCCEEEEETTEE-CCSS--EEEEEEEE-TTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECC
T ss_pred EeCCCcEEEEEEEeCCCCCeEEEEECCee-cCCC--CceEEEec-CCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEE
Confidence 34567888899999999999999998743 2222 22222111 112257899999999999999999954310
Q ss_pred --------CC------C--CCCCCcEEEEEEeEE----------e----------cCCcEEEEcccCCCCCeeeEEEEec
Q psy534 83 --------SP------N--SHKNGTWFHLDVHGV----------F----------NDGTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 83 --------~~------~--~~~~g~~~~l~c~~~----------~----------~~~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
+| . ....|+.+.|.|... . .....|.|.++ +|+|.|+|.|.|
T Consensus 90 ~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N 167 (182)
T 1rhf_A 90 PVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGV--TQSTMFSCEAHN 167 (182)
T ss_dssp CEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECCC--SSCEEEEEEEEE
T ss_pred EEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCCCceEEEEecc--ccCeEEEEEEEC
Confidence 11 1 134588999999821 0 12347888888 589999999999
Q ss_pred CCC
Q psy534 127 VLY 129 (145)
Q Consensus 127 ~~g 129 (145)
..|
T Consensus 168 ~~g 170 (182)
T 1rhf_A 168 LKG 170 (182)
T ss_dssp TTE
T ss_pred CCC
Confidence 998
No 58
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.53 E-value=5e-14 Score=105.14 Aligned_cols=117 Identities=17% Similarity=0.148 Sum_probs=84.0
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|.+.|.|.|.+.|++++.. +......|+.... .....+|.|.+++.+|+|.|.|.+.+...
T Consensus 225 ~~G~~v~l~C~~~g~p~~~i~W~~~g~~-~~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 300 (395)
T 1bih_A 225 KAGDVTMIYCMYGSNPMGYPNYFKNGKD-VNGNPEDRITRHN---RTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHS 300 (395)
T ss_dssp ETTSCEEEEEEEECSSCCCCEEEETTEE-CCCCTTSSEESCS---SSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEE
T ss_pred ECCCcEEEEEEeccCCCCeEEEEECCEE-cCCCCceeEEEEe---cCCCceEEEccCChhhCEEEEEEEEeCCCCceEEE
Confidence 4566788889999999999999999743 2222233433211 12234799999999999999999954210
Q ss_pred -------------CCC---CCCCCcEEEEEEeE---------Ee------------cCCcEEEEcccCCCCCeeeEEEEe
Q psy534 83 -------------SPN---SHKNGTWFHLDVHG---------VF------------NDGTELRISNIRSQDIGDYTCLAT 125 (145)
Q Consensus 83 -------------~~~---~~~~g~~~~l~c~~---------~~------------~~~~~L~i~~v~~~d~G~Y~C~a~ 125 (145)
.+. ....|+.+.|.|.. +. ..+..|.|.+++.+|+|.|+|.|.
T Consensus 301 ~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 380 (395)
T 1bih_A 301 LKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRAT 380 (395)
T ss_dssp EEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSSSEEEETTEEEESSCCSTTCEEEEEEEE
T ss_pred EEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCCceEEECCEEEEeeCCcccCEEEEEEEE
Confidence 111 13568999999981 10 012389999999999999999999
Q ss_pred cCCC
Q psy534 126 HVLY 129 (145)
Q Consensus 126 n~~g 129 (145)
|..|
T Consensus 381 N~~G 384 (395)
T 1bih_A 381 NEHG 384 (395)
T ss_dssp ETTE
T ss_pred ccCC
Confidence 9998
No 59
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.53 E-value=4.2e-14 Score=96.29 Aligned_cols=119 Identities=15% Similarity=0.206 Sum_probs=82.1
Q ss_pred hhhccceeeEEeec-CCCccEEEEecCCCCcccccc--cceEEEecCCCCCC--eeeEEEcccCCCCCEEEEEEEEEecC
Q psy534 8 KSIFQMLSVGDFAD-DEDIPVYIWYDSYPTHEAEEY--KGRISRVDKESPFG--MASLNLTKIRESDQGWYECKVVFLNR 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~-g~p~p~~~w~k~~~~~~~~~~--~~R~~~~~~~~~~~--~~sL~I~~v~~~D~G~Y~C~~~~~~~ 82 (145)
...+.++.+.|-+. |.|.+.+.|++++.. +...- +.++.+..+..... ..+|.|.+++.+|+|.|.|.+.+...
T Consensus 14 v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~-l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 92 (195)
T 2c5d_C 14 GARGLTGTLRCQLQVQGEPPEVHWLRDGQI-LELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQ 92 (195)
T ss_dssp ECTTCCEEEEEEEEEESSCCCCEEEETTEE-CCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTE
T ss_pred EecCCcEEEecccccCCCCcEEEEEECCEE-cccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCC
Confidence 34567888999999 999999999998754 22221 22333211100011 57899999999999999999965320
Q ss_pred -------------CC------C--CCCCCcEEEEEEeEE----------e------------cCCcEEEEcccCCCCCee
Q psy534 83 -------------SP------N--SHKNGTWFHLDVHGV----------F------------NDGTELRISNIRSQDIGD 119 (145)
Q Consensus 83 -------------~~------~--~~~~g~~~~l~c~~~----------~------------~~~~~L~i~~v~~~d~G~ 119 (145)
+| . ....|..+.|.|... . .....|.|.+++ |+|.
T Consensus 93 ~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~--d~G~ 170 (195)
T 2c5d_C 93 TFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPGLN--KTSS 170 (195)
T ss_dssp EEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSCCEEEEECCCS--SCEE
T ss_pred ceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCCCCeEEEcccc--cCce
Confidence 11 1 124588999999820 0 134579999887 7999
Q ss_pred eEEEEecCCC
Q psy534 120 YTCLATHVLY 129 (145)
Q Consensus 120 Y~C~a~n~~g 129 (145)
|+|.|.|..|
T Consensus 171 Y~C~a~N~~g 180 (195)
T 2c5d_C 171 FSCEAHNAKG 180 (195)
T ss_dssp EEEEEEETTE
T ss_pred EEEEEEcCCC
Confidence 9999999988
No 60
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.52 E-value=1.5e-14 Score=108.27 Aligned_cols=112 Identities=19% Similarity=0.289 Sum_probs=82.5
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-------
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------- 82 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------- 82 (145)
.+.++.+.|-+.|.|.|.+.|++++..... ...+... ..+.+|.|.+++.+|+|.|+|.+.+...
T Consensus 235 ~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~--~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 306 (403)
T 3laf_A 235 EGKDAVLECCVSGYPPPSFTWLRGEEVIQL--RSKKYSL------LGGSNLLISNVTDDDSGTYTCVVTYKNENISASAE 306 (403)
T ss_dssp TTSCEEECCEEEEESCCEEEEEETTEECCC--SSSSEEE------ETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEEcCCCCCCeEEEEECCeeccC--CCceEEE------CCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEE
Confidence 466777888888999999999998753211 1223333 2367899999999999999999965320
Q ss_pred -----------CCC--CCCCCcEEEEEEeE-----------------------EecCCcEEEEcccCCCCCeeeEEEEec
Q psy534 83 -----------SPN--SHKNGTWFHLDVHG-----------------------VFNDGTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 83 -----------~~~--~~~~g~~~~l~c~~-----------------------~~~~~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
.+. ....|..+.|.|.. ....+..|.|.+++.+|+|.|+|.|.|
T Consensus 307 l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 386 (403)
T 3laf_A 307 LTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAEN 386 (403)
T ss_dssp EEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEE
T ss_pred EEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEc
Confidence 111 13468899999981 012235799999999999999999999
Q ss_pred CCC
Q psy534 127 VLY 129 (145)
Q Consensus 127 ~~g 129 (145)
..|
T Consensus 387 ~~G 389 (403)
T 3laf_A 387 EAG 389 (403)
T ss_dssp TTE
T ss_pred CCc
Confidence 998
No 61
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.52 E-value=6.9e-14 Score=97.25 Aligned_cols=106 Identities=15% Similarity=0.170 Sum_probs=80.9
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|.+.|.|.+.+.|++++..... ....+|.|.+++.+|+|.|+|.+.+...
T Consensus 31 ~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~---------------~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~ 95 (218)
T 3k0w_A 31 LAGQFVKLCCRATGHPFVQYQWFKMNKEIPN---------------GNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQW 95 (218)
T ss_dssp ETTSBEEEECEETTTTSSEEEEEETTEECTT---------------CCSSEEEETTCCGGGCEEEEEEEECTTCCEECCC
T ss_pred eCCCcEEEEeeecCCCCCEEEEEECCEECCC---------------CCCCEEEEccCChhhCeEeEEEEEcCCCCceeeE
Confidence 4567888899999999999999998743110 2367899999999999999999965310
Q ss_pred -------C---------------C------C--CCCCCcEEEEEEeE---------Ee--------cCCcEEEEcccCCC
Q psy534 83 -------S---------------P------N--SHKNGTWFHLDVHG---------VF--------NDGTELRISNIRSQ 115 (145)
Q Consensus 83 -------~---------------~------~--~~~~g~~~~l~c~~---------~~--------~~~~~L~i~~v~~~ 115 (145)
. + . ....|..+.|.|.. +. .....|.|.+++.+
T Consensus 96 ~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~ 175 (218)
T 3k0w_A 96 SQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLE 175 (218)
T ss_dssp EEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCSSEEEESSCCGG
T ss_pred EEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCCCEEEEeecChh
Confidence 1 0 0 12348899999982 11 12347999999999
Q ss_pred CCeeeEEEEecCCC
Q psy534 116 DIGDYTCLATHVLY 129 (145)
Q Consensus 116 d~G~Y~C~a~n~~g 129 (145)
|+|.|+|.|.|..|
T Consensus 176 d~G~Y~C~a~n~~g 189 (218)
T 3k0w_A 176 HQGTYWCHVYNDRD 189 (218)
T ss_dssp GCEEEEEEEECSSC
T ss_pred cCEEEEEEEEcCCC
Confidence 99999999999887
No 62
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.52 E-value=2.3e-14 Score=104.01 Aligned_cols=126 Identities=14% Similarity=0.107 Sum_probs=82.8
Q ss_pred hccceeeEEee-cCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 10 IFQMLSVGDFA-DDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 10 ~~~~~~~~~w~-~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
.+..+.+.|.. .|.|.|.+.|++++..... ......+........|.|.+++.+|.|.|+|.+.+...
T Consensus 128 ~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~-----~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 202 (308)
T 4fom_A 128 GNETVAAICIAATGKPVAHIDWEGDLGEMES-----TTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRY 202 (308)
T ss_dssp CSCEEEEEEEEEEEBSCCEEEECCCSSBCCE-----EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEE
T ss_pred CCceEEEEEEecCCcCCceEEEEECCccccc-----ccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEE
Confidence 34567778875 4899999999999854211 11111110111246799999999999999999965320
Q ss_pred --------CC-------C--CCCCCcEEEEEEeE----------E------------ecCCcEEEEcccCCCCCeeeEEE
Q psy534 83 --------SP-------N--SHKNGTWFHLDVHG----------V------------FNDGTELRISNIRSQDIGDYTCL 123 (145)
Q Consensus 83 --------~~-------~--~~~~g~~~~l~c~~----------~------------~~~~~~L~i~~v~~~d~G~Y~C~ 123 (145)
+| . ....|+.+.|.|.. + ...+..|.|.+++.+|+|.|+|.
T Consensus 203 ~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 282 (308)
T 4fom_A 203 SFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICK 282 (308)
T ss_dssp EEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEE
T ss_pred eEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEEEEEE
Confidence 01 1 12347789999971 0 11233466789999999999999
Q ss_pred EecCCC-----CcEEEEeCeeE
Q psy534 124 ATHVLY-----PDLLVVLGSFH 140 (145)
Q Consensus 124 a~n~~g-----~~~~v~~~~~~ 140 (145)
|.|.+| ..|.|...++|
T Consensus 283 A~N~~G~~~~~~~l~V~~~P~~ 304 (308)
T 4fom_A 283 VTNSLGQRSDQKVIYISDPPHH 304 (308)
T ss_dssp EEETTEEEEEEEECCEECCC--
T ss_pred EEeCCCcEEEEEEEEEEcCCCC
Confidence 999999 55666666654
No 63
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.52 E-value=3.1e-14 Score=98.76 Aligned_cols=118 Identities=15% Similarity=0.090 Sum_probs=78.0
Q ss_pred cceeeEEeecCCCccEEEEecC--CCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec--------
Q psy534 12 QMLSVGDFADDEDIPVYIWYDS--YPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN-------- 81 (145)
Q Consensus 12 ~~~~~~~w~~g~p~p~~~w~k~--~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~-------- 81 (145)
.++.+.|-+.+ |.+.++|++. ++..+... .+... .....|.|.+++.+|+|.|+|.+.+..
T Consensus 25 ~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~--~~~~~------~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~ 95 (213)
T 2x1w_L 25 KTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG--NRISW------DSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMY 95 (213)
T ss_dssp CEEEECCCBSS-TTCCEEEEEETTTEEECCCS--SSCEE------ETTTEEEEEGGGTTTCSEEEEEEC----CEECCCE
T ss_pred ccEEEeeccCC-CCcEEEEEhhcCCCccccCC--Ccccc------cCCccEEEccCChhcCceEEEEEEECCeeEEEEEE
Confidence 77888887766 6788999875 22222111 22222 125679999999999999999994321
Q ss_pred ---C-----------CCC--CCCCCcEEEEEEeEE-----------ecC-------------------------CcEEEE
Q psy534 82 ---R-----------SPN--SHKNGTWFHLDVHGV-----------FND-------------------------GTELRI 109 (145)
Q Consensus 82 ---~-----------~~~--~~~~g~~~~l~c~~~-----------~~~-------------------------~~~L~i 109 (145)
+ ++. ....|+.+.|.|... ... ...|.|
T Consensus 96 ~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I 175 (213)
T 2x1w_L 96 IVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTI 175 (213)
T ss_dssp EEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEE
T ss_pred EEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEE
Confidence 0 111 124589999999811 000 113899
Q ss_pred cccCCCCCeeeEEEEecCCC-----CcEEEEeCe
Q psy534 110 SNIRSQDIGDYTCLATHVLY-----PDLLVVLGS 138 (145)
Q Consensus 110 ~~v~~~d~G~Y~C~a~n~~g-----~~~~v~~~~ 138 (145)
.+++.+|+|.|+|.|.|..| ..+.|....
T Consensus 176 ~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 176 DGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp SSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred CCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 99999999999999999998 555555443
No 64
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=100.07 Aligned_cols=115 Identities=14% Similarity=0.139 Sum_probs=81.7
Q ss_pred hhccceeeEEeecC----------CCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 9 SIFQMLSVGDFADD----------EDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 9 ~~~~~~~~~~w~~g----------~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
..+.++.+.|...| .|.+.+.|++++.... . ..|..... ......|.|.+++.+|+|.|+|.+.
T Consensus 111 ~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~-~--~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~ 184 (317)
T 2y25_A 111 LSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIR-Y--SDRVKTGV---TGEQIWLQINEPTPNDKGKYVMELF 184 (317)
T ss_dssp TCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCC-C--CSSEEEEE---CSSEEEEEEESCCGGGCEEEEEEEE
T ss_pred ccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECC-C--CCCeEEec---cCCEEEEEECcCCcccCeeEEEEEE
Confidence 45667777777766 7899999999985422 1 23343322 1235679999999999999999996
Q ss_pred EecC---------------------------------------CCC--CCCCCcEEEEEEeE---------Ee-------
Q psy534 79 FLNR---------------------------------------SPN--SHKNGTWFHLDVHG---------VF------- 101 (145)
Q Consensus 79 ~~~~---------------------------------------~~~--~~~~g~~~~l~c~~---------~~------- 101 (145)
+... .+. ....|+.+.|.|.. +.
T Consensus 185 n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~ 264 (317)
T 2y25_A 185 DGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALA 264 (317)
T ss_dssp CSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEEC
T ss_pred eCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCC
Confidence 5220 011 12458899999981 00
Q ss_pred --------cC-C--cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 --------ND-G--TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 --------~~-~--~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.. + ..|.|.+++.+|+|.|+|.|.|..|
T Consensus 265 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 303 (317)
T 2y25_A 265 SDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYG 303 (317)
T ss_dssp CCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCC
Confidence 01 1 2799999999999999999999998
No 65
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.52 E-value=3.7e-14 Score=111.14 Aligned_cols=121 Identities=12% Similarity=0.040 Sum_probs=82.8
Q ss_pred hhccceeeEEeec-CCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 9 SIFQMLSVGDFAD-DEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~-g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
..+.++.+.|-+. |.|.|.+.|++++..........+.....+.......+|.|.+++.+|+|.|+|.|.+..
T Consensus 240 ~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L 319 (527)
T 3qs9_E 240 KVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALV 319 (527)
T ss_dssp CTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTEEEEEEEE
T ss_pred eCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeCCCceEEE
Confidence 3567788899996 999999999999864322111111111111001235679999999999999999985421
Q ss_pred -C--C------C----CCCCCCcEEEEEEeE---------Ee-------------cCCcEEEEcccCCCCCeeeEEEEec
Q psy534 82 -R--S------P----NSHKNGTWFHLDVHG---------VF-------------NDGTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 82 -~--~------~----~~~~~g~~~~l~c~~---------~~-------------~~~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
+ . + .....|+.+.|.|.. +. ..+..|.|.+++.+|+|.|+|.|.|
T Consensus 320 ~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N 399 (527)
T 3qs9_E 320 TIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAEN 399 (527)
T ss_dssp EEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEE
T ss_pred EEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEe
Confidence 1 1 1 123458899999981 00 1234799999999999999999999
Q ss_pred CCC
Q psy534 127 VLY 129 (145)
Q Consensus 127 ~~g 129 (145)
..|
T Consensus 400 ~~g 402 (527)
T 3qs9_E 400 DDA 402 (527)
T ss_dssp TTE
T ss_pred CCC
Confidence 998
No 66
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.52 E-value=2.4e-14 Score=98.75 Aligned_cols=119 Identities=17% Similarity=0.139 Sum_probs=83.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC-Cc----------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP-TH----------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~~----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+.|-+.|.|.+.+.||++.. .. ....+.+|+.+.. .....+|.|.+++.+|+|.|+|.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3d9a_L 13 VTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG---SGTDFTLSINSVETEDFGMYFCQ 89 (213)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE---ETTEEEEEESSCCGGGCEEEEEE
T ss_pred EeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc---CCCEEEEEECCCChhhCEEEEEe
Confidence 4567788999999999888999998542 11 1123445666532 13467999999999999999999
Q ss_pred EEEec-----------C-----CCCC--------CCCCcEEEEEEeEE-----------e------cCC-----------
Q psy534 77 VVFLN-----------R-----SPNS--------HKNGTWFHLDVHGV-----------F------NDG----------- 104 (145)
Q Consensus 77 ~~~~~-----------~-----~~~~--------~~~g~~~~l~c~~~-----------~------~~~----------- 104 (145)
+.+.. + +|.. ...|..+.|.|... . ..+
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~ 169 (213)
T 3d9a_L 90 QSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSK 169 (213)
T ss_dssp ECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTT
T ss_pred eecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCC
Confidence 95431 0 1110 11377999999820 0 011
Q ss_pred -------cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 -------TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 -------~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.++..+|+|.|+|.|.|...
T Consensus 170 ~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3d9a_L 170 DSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 201 (213)
T ss_dssp TCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred CCCEEEEEEEEEeccccCCCCEEEEEEEEccC
Confidence 1789999999999999999999875
No 67
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.51 E-value=2.4e-14 Score=98.27 Aligned_cols=120 Identities=17% Similarity=0.220 Sum_probs=78.2
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccc--cceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEY--KGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~--~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
..+.++.+.|-+.|.|.+.+.|++++........ ..+.....+ .......|.|.+++.+|+|.|+|.+.+...
T Consensus 22 ~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~ 100 (212)
T 2v9r_A 22 SKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPS-GSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVS 100 (212)
T ss_dssp CTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTT-SCEEESSCCCCSSCCCSCEEEEEEEEETTEEEEC
T ss_pred eCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecC-CcEEEEEEEecCCCcccCeEEEEEEECCCCceee
Confidence 4567788889888889999999998743211111 111111110 011123355667899999999999965310
Q ss_pred ----------CC------C--CCCCCcEEEEEEeE----------E------e--------cCCcEEEEcccCCCCCeee
Q psy534 83 ----------SP------N--SHKNGTWFHLDVHG----------V------F--------NDGTELRISNIRSQDIGDY 120 (145)
Q Consensus 83 ----------~~------~--~~~~g~~~~l~c~~----------~------~--------~~~~~L~i~~v~~~d~G~Y 120 (145)
++ . ....|+.+.|.|.. + . ..+..|.|.+++.+|+|.|
T Consensus 101 ~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y 180 (212)
T 2v9r_A 101 HDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKY 180 (212)
T ss_dssp CCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTEEEESSCCGGGCEEE
T ss_pred cceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCeEEEeeCCHhhCeeE
Confidence 11 0 12348899999971 0 0 1124799999999999999
Q ss_pred EEEEecCCC
Q psy534 121 TCLATHVLY 129 (145)
Q Consensus 121 ~C~a~n~~g 129 (145)
+|.|.|..|
T Consensus 181 ~C~a~N~~g 189 (212)
T 2v9r_A 181 VCVGTNMVG 189 (212)
T ss_dssp EEEEEETTE
T ss_pred EEEEecccC
Confidence 999999988
No 68
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.51 E-value=1e-14 Score=108.39 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=87.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcc-c----------ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHE-A----------EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~-~----------~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
+..+.++.+.|-+.|.|.+.+.|++++...+ . ..+..|+.+..+....++.+|.|.+++.+|+|.|+|.
T Consensus 6 ~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 85 (363)
T 1wio_A 6 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICE 85 (363)
T ss_dssp EETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEEEE
T ss_pred EeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEEEE
Confidence 4567788889988899999999999975311 1 2345566542100012477899999999999999999
Q ss_pred EEEec-----------CCC-CCCCCCcEEEEEEeE---------Ee-------cCCcEEEEcccCCCCCeeeEEEEecCC
Q psy534 77 VVFLN-----------RSP-NSHKNGTWFHLDVHG---------VF-------NDGTELRISNIRSQDIGDYTCLATHVL 128 (145)
Q Consensus 77 ~~~~~-----------~~~-~~~~~g~~~~l~c~~---------~~-------~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 128 (145)
+.+.. .++ .....|+.+.|.|.. +. .....|.|.+++.+|+|.|+|.|.|..
T Consensus 86 ~~n~~~~~~l~V~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~ 165 (363)
T 1wio_A 86 VEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQ 165 (363)
T ss_dssp ETTEEEEEEEEEEEEEESSCSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEEESSEEEECSBCGGGCEECEEEEEETT
T ss_pred EEECCCcEEEEEEeCCCCCceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccccceEEEEeeCChhcCCEEEEEEecCC
Confidence 94321 122 234569999999982 11 123479999999999999999999986
Q ss_pred C
Q psy534 129 Y 129 (145)
Q Consensus 129 g 129 (145)
+
T Consensus 166 ~ 166 (363)
T 1wio_A 166 K 166 (363)
T ss_dssp E
T ss_pred C
Confidence 5
No 69
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.50 E-value=7.2e-14 Score=104.05 Aligned_cols=108 Identities=21% Similarity=0.303 Sum_probs=80.2
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-------
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------- 82 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------- 82 (145)
.+.++.+.|-+.|.|.|.+.|++++... .. + .......|.|.+++.+|+|.|.|.+.+...
T Consensus 221 ~G~~v~l~C~~~g~p~~~i~W~~~~~~~-~~----~-------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 288 (382)
T 1cs6_A 221 TGQMVTLECFAFGNPVPQIKWRKLDGSQ-TS----K-------WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGR 288 (382)
T ss_dssp TTCCEEEECEEEEESCCEEEEEECCSCC-SC----C-------CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCeEEEEEEEccCCCCEEEEEECCccc-cc----E-------EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEE
Confidence 4556777888889999999999987542 11 1 113478899999999999999999965320
Q ss_pred -----------CCC--CCCCCcEEEEEEeE---------Eec-------------CCcEEEEcccCCCCCeeeEEEEecC
Q psy534 83 -----------SPN--SHKNGTWFHLDVHG---------VFN-------------DGTELRISNIRSQDIGDYTCLATHV 127 (145)
Q Consensus 83 -----------~~~--~~~~g~~~~l~c~~---------~~~-------------~~~~L~i~~v~~~d~G~Y~C~a~n~ 127 (145)
.+. ....|+.+.|.|.. +.. .+..|.|.+++.+|+|.|+|.|.|.
T Consensus 289 l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 368 (382)
T 1cs6_A 289 IIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENK 368 (382)
T ss_dssp EEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEET
T ss_pred EEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeC
Confidence 111 13458999999981 000 1237999999999999999999999
Q ss_pred CC
Q psy534 128 LY 129 (145)
Q Consensus 128 ~g 129 (145)
.|
T Consensus 369 ~G 370 (382)
T 1cs6_A 369 HG 370 (382)
T ss_dssp TE
T ss_pred CC
Confidence 98
No 70
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.50 E-value=8.2e-14 Score=97.50 Aligned_cols=113 Identities=12% Similarity=0.116 Sum_probs=77.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCee--eEEEcccCCCCCEEEEEEEEEec----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMA--SLNLTKIRESDQGWYECKVVFLN---- 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~--sL~I~~v~~~D~G~Y~C~~~~~~---- 81 (145)
...+.++.+.|.+.+ +.+.+.|+|++..... .. .+... ..... +|.|.+++.+|+|.|+|.+.+..
T Consensus 20 v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~-~~-~~~~~-----~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (218)
T 1uct_A 20 IPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYR-EI-GRRLK-----FWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFR 91 (218)
T ss_dssp EETTCCEEEEECCCT-TCSEEEEEEEETTEEE-EC-SEECC---------CCCEEEECSCCGGGCEEEEEEEEETTTEEE
T ss_pred cCCCCCEEEEEEcCC-CCCEEEEEECCCcccc-cc-cccCC-----CCcceeeEEEEcccccccCEEEEEEEEcCCCcee
Confidence 455778888998877 6789999999754211 10 11110 01245 89999999999999999997631
Q ss_pred --------C-----CC------C-CCCCCcEEEEEEe---------EEe-------------cCCcEEEEcccCCCCCee
Q psy534 82 --------R-----SP------N-SHKNGTWFHLDVH---------GVF-------------NDGTELRISNIRSQDIGD 119 (145)
Q Consensus 82 --------~-----~~------~-~~~~g~~~~l~c~---------~~~-------------~~~~~L~i~~v~~~d~G~ 119 (145)
+ .| . ....|+.++|.|. ... .....|.|.+++.+|+|.
T Consensus 92 ~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 171 (218)
T 1uct_A 92 YSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGI 171 (218)
T ss_dssp ECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCSCCGGGCEE
T ss_pred ecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEccCCcccCEE
Confidence 0 01 1 1245899999993 010 123579999999999999
Q ss_pred eEEEEecCC
Q psy534 120 YTCLATHVL 128 (145)
Q Consensus 120 Y~C~a~n~~ 128 (145)
|+|.|.|..
T Consensus 172 Y~C~a~n~~ 180 (218)
T 1uct_A 172 YRCYGWYNR 180 (218)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEcCC
Confidence 999999853
No 71
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.50 E-value=5.9e-14 Score=96.15 Aligned_cols=114 Identities=11% Similarity=0.038 Sum_probs=79.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec----C-
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN----R- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~----~- 82 (145)
...+.++.+.|.+.|.|. .+.|+|++.... .....+. . .....+|.|.+++.+|+|.|+|.+.+.. .
T Consensus 16 v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~-~~~~~~~-~-----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~ 87 (198)
T 1ugn_A 16 ITQGSPVTLRCQGGQETQ-EYRLYREKKTAP-WITRIPQ-E-----LVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSES 87 (198)
T ss_dssp EETTCCEEEEEECCTTCC-CEEEEESSSCCH-HHHTSCH-H-----HHTTTEEEESSCCGGGCEEEEEEEEETTTEECCC
T ss_pred ccCCCcEEEEEEecCCCc-EEEEEECCcccc-ccccccc-c-----CCcccEEEECCCCHHHCeEEEEEEECCCCCcccC
Confidence 456778889999988876 599999975421 1111100 0 1237889999999999999999997632 1
Q ss_pred ---------C-C-C---------CCCCCcEEEEEEeE--------E----------------ecC---CcEEEEcccCCC
Q psy534 83 ---------S-P-N---------SHKNGTWFHLDVHG--------V----------------FND---GTELRISNIRSQ 115 (145)
Q Consensus 83 ---------~-~-~---------~~~~g~~~~l~c~~--------~----------------~~~---~~~L~i~~v~~~ 115 (145)
. + . ....|+.+.|.|.. + ... ...|.|.+++.+
T Consensus 88 s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 167 (198)
T 1ugn_A 88 SDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPS 167 (198)
T ss_dssp CCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSCCSEEEEEEC------CEEEC------CCEEEEEECCCCTT
T ss_pred CccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCCCcEEEEEECCCccCCccccccccCCCcceeEEEecccCcc
Confidence 0 0 1 12358899999981 0 011 157999999999
Q ss_pred CCeeeEEEEecCCC
Q psy534 116 DIGDYTCLATHVLY 129 (145)
Q Consensus 116 d~G~Y~C~a~n~~g 129 (145)
|+|.|+|.|.|..+
T Consensus 168 D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 168 RRWWYRCYAYDSNS 181 (198)
T ss_dssp SCEEEEEEEECTTS
T ss_pred cCeEEEEEEEeCCC
Confidence 99999999999865
No 72
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.49 E-value=3.2e-13 Score=94.64 Aligned_cols=118 Identities=16% Similarity=0.124 Sum_probs=81.2
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC-C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP-T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
...+..+.+-|- .+.|.+.+.|+++.. . .....+.+|+.+.. ......+|.|.+++.+|+|.|
T Consensus 12 v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~L~I~~v~~~DsG~Y 88 (238)
T 2p1y_A 12 AVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASR--PSQENFSLILELATPSQTSVY 88 (238)
T ss_dssp EETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEEC--CSSSBCEEEESSCCGGGCEEE
T ss_pred EeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEc--cCCceEEEEEecCCcccCeeE
Confidence 456777888898 678889999998621 0 00123455666532 123467899999999999999
Q ss_pred EEEEEEec---------------C--CC------------C----C----CCCCcEEEEEEeE---------Eec-----
Q psy534 74 ECKVVFLN---------------R--SP------------N----S----HKNGTWFHLDVHG---------VFN----- 102 (145)
Q Consensus 74 ~C~~~~~~---------------~--~~------------~----~----~~~g~~~~l~c~~---------~~~----- 102 (145)
+|.+.+.. + .+ . + ...|+.+.|.|.. ++.
T Consensus 89 ~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~ 168 (238)
T 2p1y_A 89 FCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGE 168 (238)
T ss_dssp EEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTS
T ss_pred EEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCC
Confidence 99996431 0 11 0 0 2348899999981 000
Q ss_pred ----------------------------CCcEEEEcccCCCCCeeeEEEEecCC
Q psy534 103 ----------------------------DGTELRISNIRSQDIGDYTCLATHVL 128 (145)
Q Consensus 103 ----------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~ 128 (145)
....|.|.+++.+|+|.|+|.|.|..
T Consensus 169 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 169 GPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 01269999999999999999999984
No 73
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.49 E-value=1.2e-13 Score=94.14 Aligned_cols=113 Identities=9% Similarity=0.081 Sum_probs=78.2
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec---C--
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN---R-- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~---~-- 82 (145)
...+.++.+.|.+.+. .+.+.|+|++.... .... +. .....+.+|.|.+++.+|+|.|+|.+.+.. .
T Consensus 15 v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~-~~~~-~~-----~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s 86 (188)
T 1oll_A 15 VPKEKQVTICCQGNYG-AVEYQLHFEGSLFA-VDRP-KP-----PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPS 86 (188)
T ss_dssp EETTCCEEEEEECCTT-CCEEEEEETTEEEE-EECC-SS-----CTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCC
T ss_pred CCCCCCEEEEEecCCC-CCEEEEEECCCccc-cccc-cc-----CCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCC
Confidence 4457788889988764 46899999875321 1000 00 012347899999999999999999996421 0
Q ss_pred ------------CC------C-CCCCCcEEEEEEeE--------E-------------ecCCcEEEEcccCCCCCeeeEE
Q psy534 83 ------------SP------N-SHKNGTWFHLDVHG--------V-------------FNDGTELRISNIRSQDIGDYTC 122 (145)
Q Consensus 83 ------------~~------~-~~~~g~~~~l~c~~--------~-------------~~~~~~L~i~~v~~~d~G~Y~C 122 (145)
.| . ....|+.+.|.|.. . ...+..|.|.+++.+|+|.|+|
T Consensus 87 ~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C 166 (188)
T 1oll_A 87 NLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRC 166 (188)
T ss_dssp CCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSSSCSEEEEEEESSSCEEEEEECSSEEEEEEEECCGGGCEEEEE
T ss_pred CceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCCCCCEEEEEECCccccccccCCCceeEEEECCCCcCCCcEEEE
Confidence 01 1 12358999999981 0 1123479999999999999999
Q ss_pred EEecCC
Q psy534 123 LATHVL 128 (145)
Q Consensus 123 ~a~n~~ 128 (145)
.|.|..
T Consensus 167 ~a~n~~ 172 (188)
T 1oll_A 167 FGSYNN 172 (188)
T ss_dssp ECEEET
T ss_pred EEEcCC
Confidence 999864
No 74
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.49 E-value=2.5e-13 Score=95.81 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=83.6
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC--C--------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP--T--------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~--~--------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+.|-+.|.| .+.+.||++.. . .....+.+|+.+..+ ...+..+|.|.+++.+|
T Consensus 14 v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D 92 (247)
T 2ghw_B 14 VQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRD-NSKNTLYLQMNSLRAED 92 (247)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEe-CCCCEEEEEECcCCHHH
Confidence 45677888899998887 67899998531 1 011235567776432 22446889999999999
Q ss_pred CEEEEEEEEEe--c----------C--CC-------------C------C----CCCCcEEEEEEeE---------Eec-
Q psy534 70 QGWYECKVVFL--N----------R--SP-------------N------S----HKNGTWFHLDVHG---------VFN- 102 (145)
Q Consensus 70 ~G~Y~C~~~~~--~----------~--~~-------------~------~----~~~g~~~~l~c~~---------~~~- 102 (145)
+|.|+|.+.+. . + .+ . + ...|+.+.|.|.. ++.
T Consensus 93 ~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 172 (247)
T 2ghw_B 93 TAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQ 172 (247)
T ss_dssp CEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred CEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEE
Confidence 99999999653 0 0 10 0 0 2348899999981 111
Q ss_pred -C-----------------------------CcEEEEcccCCCCCeeeEEEEecCC
Q psy534 103 -D-----------------------------GTELRISNIRSQDIGDYTCLATHVL 128 (145)
Q Consensus 103 -~-----------------------------~~~L~i~~v~~~d~G~Y~C~a~n~~ 128 (145)
. ...|.|.+++.+|+|.|+|.|.|..
T Consensus 173 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 173 KPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred CCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 0 1249999999999999999999853
No 75
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.49 E-value=2.7e-13 Score=95.75 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=49.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCc-----------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTH-----------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~-----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+-|-+.+.|.+.+.||++.... ....+.+|+.... .....+|.|.+++.+|+|.|+|.
T Consensus 16 v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 92 (250)
T 3esu_F 16 ASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSG---SGTDYSLTISNLEQEDIGTYFCQ 92 (250)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEEEEEE
T ss_pred eeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeC---CCCEEEEEEccCChhhCEEEEEE
Confidence 456788899999999999999999864210 0122345654422 13467899999999999999999
Q ss_pred EEE
Q psy534 77 VVF 79 (145)
Q Consensus 77 ~~~ 79 (145)
+.+
T Consensus 93 ~~n 95 (250)
T 3esu_F 93 QGN 95 (250)
T ss_dssp ECS
T ss_pred Eee
Confidence 943
No 76
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.49 E-value=4.1e-13 Score=97.74 Aligned_cols=123 Identities=13% Similarity=0.057 Sum_probs=80.2
Q ss_pred cceeeEEeec-CCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC--------
Q psy534 12 QMLSVGDFAD-DEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR-------- 82 (145)
Q Consensus 12 ~~~~~~~w~~-g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~-------- 82 (145)
....+.|.+. |.|.|.+.|++++..... ..+.....+........|.|.+++.+|.|.|.|.+.+...
T Consensus 133 ~~~~~~C~~~~~~P~~~i~W~~~~~~~~~---~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 209 (313)
T 4fqp_A 133 PVPMARCVSTGGRPPAQITWHSDLGGMPN---TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTV 209 (313)
T ss_dssp CEEEEEEEEEEEBSCCEEEEEETTCCEEE---EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEE
T ss_pred ceEEEEEEccCccCCcEEEeecCCccccc---cceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeee
Confidence 3445567665 789999999998754221 1111111000000135689999999999999999965321
Q ss_pred ------CC-------C--CCCCCcEEEEEEeE----------E-----------ecCCcEEEEcccCCCCCeeeEEEEec
Q psy534 83 ------SP-------N--SHKNGTWFHLDVHG----------V-----------FNDGTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 83 ------~~-------~--~~~~g~~~~l~c~~----------~-----------~~~~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
+| . ....|..+.|.|.. + ...+..|.|.+++.+|+|.|+|.|.|
T Consensus 210 ~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 289 (313)
T 4fqp_A 210 NLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVTN 289 (313)
T ss_dssp ECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECCCSSCCEEEEEEEEEC
T ss_pred ecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECcCChhhCEEEEEEEEe
Confidence 11 1 12347889999981 1 11235899999999999999999999
Q ss_pred CCC-----CcEEEEeC
Q psy534 127 VLY-----PDLLVVLG 137 (145)
Q Consensus 127 ~~g-----~~~~v~~~ 137 (145)
.+| ..|.|..+
T Consensus 290 ~~G~~~~~~~l~V~~~ 305 (313)
T 4fqp_A 290 ALGARQAELTVQVKEG 305 (313)
T ss_dssp SSCEEEEEEEEEEECC
T ss_pred CCCcEEEEEEEEEEeC
Confidence 999 44555433
No 77
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.49 E-value=9.4e-14 Score=98.92 Aligned_cols=130 Identities=17% Similarity=0.160 Sum_probs=87.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCC-c-----------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPT-H-----------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~-~-----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
...+.++.+-|.+.+.|.+.+.||+.... . ......+|+.+.. +......+|.|.+++.+|+|.|+|
T Consensus 15 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~sL~I~~v~~~DsG~Y~C 93 (256)
T 3tf7_C 15 VSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEF-SKSDSSFHLRKASVHRSDSAVYFC 93 (256)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEE-ETTTTEEEEEESSCCGGGCSEEEE
T ss_pred ecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEE-cCCCCEEEEEECCCCcccCEEEEE
Confidence 45677888889998889999999984311 0 0011244555421 123457899999999999999999
Q ss_pred EEEEec--------------CCC--------------------C----------CCCCCcEEEEEEeE--------Ee--
Q psy534 76 KVVFLN--------------RSP--------------------N----------SHKNGTWFHLDVHG--------VF-- 101 (145)
Q Consensus 76 ~~~~~~--------------~~~--------------------~----------~~~~g~~~~l~c~~--------~~-- 101 (145)
.+.+.. +.+ . ....|+.++|.|.. ++
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~v~W~k~ 173 (256)
T 3tf7_C 94 AVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNSHNYMYWYRQ 173 (256)
T ss_dssp EEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSCCSEEEEEEE
T ss_pred EEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCCceEEEEEEE
Confidence 996521 011 0 01258999999971 00
Q ss_pred ---------------------------------cCCcEEEEcccCCCCCeeeEEEEecCCC-------CcEEEEeCe
Q psy534 102 ---------------------------------NDGTELRISNIRSQDIGDYTCLATHVLY-------PDLLVVLGS 138 (145)
Q Consensus 102 ---------------------------------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g-------~~~~v~~~~ 138 (145)
....+|.|.+++.+|+|.|+|.|.|..| ..|.|....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~~~ 250 (256)
T 3tf7_C 174 DTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSKLTVLELE 250 (256)
T ss_dssp CTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEEEEEECGG
T ss_pred CCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeEEEEEccc
Confidence 0112699999999999999999998755 666666543
No 78
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.48 E-value=2.3e-13 Score=96.54 Aligned_cols=69 Identities=20% Similarity=0.252 Sum_probs=48.8
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC---Cc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP---TH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
...+.++.+-|.+.+. |.+.+.|||+.. .. ......+|+.+... ....+|.|.+++.+|+|.|+
T Consensus 14 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~L~I~~v~~~DsG~Y~ 90 (256)
T 3ux9_B 14 GAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKS---GTSASLAITGLQSEDEADYY 90 (256)
T ss_dssp ECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEE---TTEEEEEECSCCGGGCEEEE
T ss_pred EcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEcc---CCEEEEEECCCChhhCEEEE
Confidence 4567788889998876 788999998531 10 00113456655321 34678999999999999999
Q ss_pred EEEEE
Q psy534 75 CKVVF 79 (145)
Q Consensus 75 C~~~~ 79 (145)
|.+.+
T Consensus 91 C~~~~ 95 (256)
T 3ux9_B 91 CQVRD 95 (256)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
No 79
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.48 E-value=1.9e-13 Score=95.04 Aligned_cols=120 Identities=13% Similarity=0.134 Sum_probs=82.9
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC-Cc-----------------ccccccceEEEecCCCCCCeeeEEEcccCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP-TH-----------------EAEEYKGRISRVDKESPFGMASLNLTKIRE 67 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~~-----------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~ 67 (145)
+..+..+.+-|.+.+.+ .+.+.||++.. .. ....+.+|+.+..+. ..++.+|.|.+++.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~v~~ 90 (222)
T 1q9r_B 12 VQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDN-SQSILYLQMNTLRA 90 (222)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEET-TTTEEEEEECSCCG
T ss_pred EcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEEC-CCCeEEEEECcCCc
Confidence 45677888899988765 67899988531 10 112356788775431 23478999999999
Q ss_pred CCCEEEEEEEEEec------C---------------CC--------CCCCCCcEEEEEEeEE-----------ec-----
Q psy534 68 SDQGWYECKVVFLN------R---------------SP--------NSHKNGTWFHLDVHGV-----------FN----- 102 (145)
Q Consensus 68 ~D~G~Y~C~~~~~~------~---------------~~--------~~~~~g~~~~l~c~~~-----------~~----- 102 (145)
+|+|.|+|.+.+.. . .| .....|..+.|.|... ..
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 170 (222)
T 1q9r_B 91 EDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 170 (222)
T ss_dssp GGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred ccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCeEc
Confidence 99999999996521 0 01 0123588999999821 00
Q ss_pred ----------CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 ----------DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 ----------~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
++ ..|.|..+..+| |.|+|.|.|..|
T Consensus 171 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~ 211 (222)
T 1q9r_B 171 GVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPAS 211 (222)
T ss_dssp TEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred ceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCC
Confidence 11 146788888889 999999999987
No 80
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.48 E-value=7e-14 Score=96.42 Aligned_cols=119 Identities=16% Similarity=0.123 Sum_probs=82.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCC---CCc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSY---PTH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~---~~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+.|.+.|.|.+.+.|||.. ... ....+.+|+.+.. ...+.+|.|.+++.+|+|.|.|.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 12 VALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN---SGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE---ETTEEEEEESSCCGGGCEEEEEE
T ss_pred EeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe---cCCEEEEEECCCChhhCEEEEEE
Confidence 456778889999999999999999832 110 0111445665432 24578999999999999999999
Q ss_pred EEEecC-------------------CCCC--------CCCCcEEEEEEeEE-----------ecC---------------
Q psy534 77 VVFLNR-------------------SPNS--------HKNGTWFHLDVHGV-----------FND--------------- 103 (145)
Q Consensus 77 ~~~~~~-------------------~~~~--------~~~g~~~~l~c~~~-----------~~~--------------- 103 (145)
+.+... +|.. ...|..+.|.|... ..+
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 168 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSK 168 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEE
T ss_pred eccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCc
Confidence 965320 1100 11489999999810 011
Q ss_pred --C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 --G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 --~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|..+..+|+|.|+|.|+|..+
T Consensus 169 ~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3mj8_L 169 SDSKYMATSYLTMTADAWKSRNTFICKVTHGGN 201 (213)
T ss_dssp ETTEEEEEEEEEEESHHHHSCSCEEEEEEETTE
T ss_pred cCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCc
Confidence 1 2377888899999999999999986
No 81
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.48 E-value=1.6e-14 Score=108.30 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=79.4
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEccc-CCCCCEEEEEEEEEecC-----
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKI-RESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v-~~~D~G~Y~C~~~~~~~----- 82 (145)
..+.++.+.|-+.|.|.|.+.|+|++.. +......|..+ .+++|.|.++ +.+|+|.|+|.|.+...
T Consensus 21 ~eg~~v~L~C~~~g~P~p~i~W~k~g~~-l~~~~~~~~~~-------~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~ 92 (384)
T 3kld_A 21 SEEKKVKLSCEVKGNPKPHIRWKLNGTD-VDIGMDFRYSV-------VDGSLLINNPNKTQDAGTYQCIATNSFGTIVSR 92 (384)
T ss_dssp CSCSEEEECCEEEEESCCEEEEEETTEE-CCC----CEEE-------ETTEEEEESCCHHHHCEEEEEEEEETTEEEECC
T ss_pred CCCCeEEEEeEecCCCCCEEEEEECCEE-CcCCCCccEEE-------ECCEEEEcCCCCcccCEEEEEEEEcCcccEEec
Confidence 4567788889999999999999999853 22222234433 1567888776 88999999999976420
Q ss_pred ---------CC------C--CCCCCcEEEEEEeE----------E---------------ecCCcEEEEcccCCCCCeee
Q psy534 83 ---------SP------N--SHKNGTWFHLDVHG----------V---------------FNDGTELRISNIRSQDIGDY 120 (145)
Q Consensus 83 ---------~~------~--~~~~g~~~~l~c~~----------~---------------~~~~~~L~i~~v~~~d~G~Y 120 (145)
+. . ....|+.+.|.|.. + ......|.|.+++.+|+|.|
T Consensus 93 ~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 172 (384)
T 3kld_A 93 EAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNY 172 (384)
T ss_dssp CEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEE
T ss_pred ceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceE
Confidence 00 0 12248888898941 0 01224799999999999999
Q ss_pred EEEEecCCC
Q psy534 121 TCLATHVLY 129 (145)
Q Consensus 121 ~C~a~n~~g 129 (145)
+|.|.|..+
T Consensus 173 ~C~a~n~~~ 181 (384)
T 3kld_A 173 TCVVTNTVT 181 (384)
T ss_dssp EEEEEETTT
T ss_pred EEEEecccc
Confidence 999999886
No 82
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.47 E-value=1.3e-13 Score=98.92 Aligned_cols=113 Identities=15% Similarity=0.098 Sum_probs=79.9
Q ss_pred hhccceeeEEeecCCCccE-EEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 9 SIFQMLSVGDFADDEDIPV-YIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~-~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
..+.++.+.|.+.+.+.+. +.|++.+...+. ...+..+. .+++|.|.+++.+|+|.|+|.+.+..
T Consensus 102 ~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~--~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~ 173 (289)
T 3ejj_X 102 VEGQEAVLPCLITDPALKDSVSLMREGGRQVL--RKTVYFFS------PWRGFIIRKAKVLDSNTYVCKTMVNGRESTST 173 (289)
T ss_dssp ETTSCEEECEEESCGGGGGSEEEEEGGGEECC--TTCCEEEE------TTTEEEESSCCGGGCEEEEEEEEETTEEEECC
T ss_pred ecCCceEeEEEccCCCcceEEEEEecCCeecC--CCccEEEC------CCCCEEEeecccccCEEEEEEEEeCCCccccc
Confidence 3466778889988877665 999865433221 22344442 26779999999999999999996321
Q ss_pred -----C------CC------CC--CCCCcEEEEEEeEE----------ec-------------------CCcEEEEcccC
Q psy534 82 -----R------SP------NS--HKNGTWFHLDVHGV----------FN-------------------DGTELRISNIR 113 (145)
Q Consensus 82 -----~------~~------~~--~~~g~~~~l~c~~~----------~~-------------------~~~~L~i~~v~ 113 (145)
+ +| .. ...|..+.|.|... .. ....|.|.+++
T Consensus 174 ~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 253 (289)
T 3ejj_X 174 GIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVD 253 (289)
T ss_dssp CEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCC
T ss_pred cEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeec
Confidence 0 11 01 23599999999811 00 02479999999
Q ss_pred CCCCeeeEEEEecCCC
Q psy534 114 SQDIGDYTCLATHVLY 129 (145)
Q Consensus 114 ~~d~G~Y~C~a~n~~g 129 (145)
.+|+|.|+|.|.|..|
T Consensus 254 ~~d~G~Y~C~a~N~~G 269 (289)
T 3ejj_X 254 FQDAGIYSCVASNDVG 269 (289)
T ss_dssp SSSCEEEEEEEECSSC
T ss_pred ccCCEEEEEEEEcCCC
Confidence 9999999999999999
No 83
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.47 E-value=1.3e-13 Score=105.22 Aligned_cols=121 Identities=12% Similarity=0.009 Sum_probs=78.0
Q ss_pred hhccceeeEEeecC-CCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 9 SIFQMLSVGDFADD-EDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g-~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
..+.++.+.|-+.| .|.|.+.|++++........................+|.|.+++.+|+|.|.|.|.+..
T Consensus 240 ~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L 319 (423)
T 3qs7_E 240 KVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALV 319 (423)
T ss_dssp ETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEE
T ss_pred eCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEE
Confidence 35667888999998 67899999999864322111000111110001225679999999999999999995431
Q ss_pred -C--C------C----CCCCCCcEEEEEEeE---------EecCC-------------cEEEEcccCCCCCeeeEEEEec
Q psy534 82 -R--S------P----NSHKNGTWFHLDVHG---------VFNDG-------------TELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 82 -~--~------~----~~~~~g~~~~l~c~~---------~~~~~-------------~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
+ + + .....|+.+.|.|.. +..++ ..+.+..+..+|+|.|+|.|+|
T Consensus 320 ~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N 399 (423)
T 3qs7_E 320 TIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAEN 399 (423)
T ss_dssp EEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEE
T ss_pred EEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccccCCcEEEEEecccccCEEEEEEEEc
Confidence 0 1 1 113458999999981 11122 1222366778999999999999
Q ss_pred CCC
Q psy534 127 VLY 129 (145)
Q Consensus 127 ~~g 129 (145)
..|
T Consensus 400 ~~G 402 (423)
T 3qs7_E 400 DDA 402 (423)
T ss_dssp TTE
T ss_pred CCc
Confidence 998
No 84
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.47 E-value=2.3e-13 Score=93.74 Aligned_cols=119 Identities=17% Similarity=0.178 Sum_probs=82.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC-Ccc----------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP-THE----------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~~~----------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+..+.+.|.+.|.|.+.+.||++.. ... ...+.+|+.+.. ..+..+|.|.+++.+|+|.|.|.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 88 (210)
T 1lk3_L 12 VSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG---SGTDFTLTIDPVEADDTAIYFCQ 88 (210)
T ss_dssp ECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEEEEEE
T ss_pred EcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe---cCCEEEEEECCCCHHHCeEEEEE
Confidence 4567788999999999888999998531 110 123446666532 13467999999999999999999
Q ss_pred EEEec-----------C-----CCCC--------CCCCcEEEEEEeEE-----------e------c-------------
Q psy534 77 VVFLN-----------R-----SPNS--------HKNGTWFHLDVHGV-----------F------N------------- 102 (145)
Q Consensus 77 ~~~~~-----------~-----~~~~--------~~~g~~~~l~c~~~-----------~------~------------- 102 (145)
+.+.. + +|.. ...|..+.|.|... . .
T Consensus 89 ~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~ 168 (210)
T 1lk3_L 89 QSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSK 168 (210)
T ss_dssp ECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTT
T ss_pred EEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCC
Confidence 95421 0 1110 12388999999810 0 0
Q ss_pred CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 ~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
++ ..|.|..+..+|+|.|+|.|.|...
T Consensus 169 ~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 169 DSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp TCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred CCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 11 1588999999999999999999865
No 85
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.46 E-value=4.9e-13 Score=92.40 Aligned_cols=112 Identities=12% Similarity=0.177 Sum_probs=78.0
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------- 81 (145)
..+..+.+.|.+.|.|.|.+.|++.... ...++.... ..+++|.|.+++.+|+|.|.|.+.+..
T Consensus 14 ~~G~~v~L~C~~~g~P~p~i~W~~~~~~----~~~~~~~~~-----~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~ 84 (202)
T 1vca_A 14 QIGDSVSLTCSTTGCESPFFSWRTQIDS----PLNGKVTNE-----GTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGI 84 (202)
T ss_dssp ETTSCEEEEEEEESCSSCEEEEEETTCC----CCSSEEEEE-----TTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEE
T ss_pred cCCCcEEEEEeecCCCCCeEEEECCCCC----CccceEEEc-----CCccEEEECcCCHHHCEEEEEEEEECCceEeeEE
Confidence 4677899999999999999999885322 112333221 236789999999999999999996532
Q ss_pred ---C--CC--------CCCCCCcEEEEEEeE------------EecCC---------------------cEEEEcccCCC
Q psy534 82 ---R--SP--------NSHKNGTWFHLDVHG------------VFNDG---------------------TELRISNIRSQ 115 (145)
Q Consensus 82 ---~--~~--------~~~~~g~~~~l~c~~------------~~~~~---------------------~~L~i~~v~~~ 115 (145)
+ +| .....|+.+.|.|.. +..++ ..|.|..+..+
T Consensus 85 ~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d 164 (202)
T 1vca_A 85 QVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIED 164 (202)
T ss_dssp EEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGG
T ss_pred EEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeecc
Confidence 1 12 113458999999981 00011 12456666777
Q ss_pred CCeeeEEEEecCCC
Q psy534 116 DIGDYTCLATHVLY 129 (145)
Q Consensus 116 d~G~Y~C~a~n~~g 129 (145)
|.|.|+|.|.|.+|
T Consensus 165 ~~g~ytC~A~n~~~ 178 (202)
T 1vca_A 165 IGKVLVCRAKLHID 178 (202)
T ss_dssp TTCEEEEEEEECSC
T ss_pred CCCeEEEEEEcccc
Confidence 88999999999887
No 86
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.46 E-value=1e-12 Score=94.19 Aligned_cols=119 Identities=18% Similarity=0.180 Sum_probs=83.5
Q ss_pred hhhccceeeEEeecCCC-ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 8 KSIFQMLSVGDFADDED-IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p-~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
...+.++.+.|-+.|.| .+.+.|++.++..+. ....|+.+... .....+|.|.+++.+|+|.|+|.+.+...
T Consensus 14 v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~-~~~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~ 90 (291)
T 1qz1_A 14 ISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS-PNQQRISVVWN--DDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSE 90 (291)
T ss_dssp EETTCCEEEEEEESSCCSCCEEEEECTTSCBCC-SSCSSEEEEEE--ETTEEEEEECSCCGGGCEEEEEEEECTTSCEEE
T ss_pred EeCCCeEEEEEEeCCCCCCcEeEEECCCCeECc-cCCceEEEEEc--CCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeE
Confidence 34677889999999876 799999994322222 12344444321 12478999999999999999999965320
Q ss_pred ---------C------CC--CCCCCcEEEEEEeE---------E----------------ecCCcEEEEcccCCCCCeee
Q psy534 83 ---------S------PN--SHKNGTWFHLDVHG---------V----------------FNDGTELRISNIRSQDIGDY 120 (145)
Q Consensus 83 ---------~------~~--~~~~g~~~~l~c~~---------~----------------~~~~~~L~i~~v~~~d~G~Y 120 (145)
+ +. ....|+.+.|.|.. + ...+..|.|.+++.+|+|.|
T Consensus 91 ~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 170 (291)
T 1qz1_A 91 ATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTY 170 (291)
T ss_dssp EEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEE
T ss_pred EEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEE
Confidence 1 11 12458899999981 0 11234799999999999999
Q ss_pred EEEEecCCC
Q psy534 121 TCLATHVLY 129 (145)
Q Consensus 121 ~C~a~n~~g 129 (145)
+|.|.|..+
T Consensus 171 ~C~a~n~~~ 179 (291)
T 1qz1_A 171 RCEGRILAR 179 (291)
T ss_dssp EEEEEEGGG
T ss_pred EEEEEecCC
Confidence 999999764
No 87
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.45 E-value=4.2e-13 Score=97.46 Aligned_cols=111 Identities=20% Similarity=0.228 Sum_probs=80.4
Q ss_pred hccceeeEEee------cCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE-Eec-
Q psy534 10 IFQMLSVGDFA------DDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV-FLN- 81 (145)
Q Consensus 10 ~~~~~~~~~w~------~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~-~~~- 81 (145)
.+..+.+.|-+ .|.|.|.+.|++++...... ..++.. .+.+|.|.+++.+|+|.|.|.+. +..
T Consensus 117 ~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~--~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~~n~~g 187 (315)
T 1itb_B 117 VAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLD--NIHFSG-------VKDRLIVMNVAEKHRGNYTCHASYTYLG 187 (315)
T ss_dssp TTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCC--SSSEEE-------ETTEEEESSCCGGGCEEEEEEEEEEETT
T ss_pred cCCCeEEEEecccccccCCCCCCEEEEEECCEECCCc--cceEee-------cCceEEEEeceehhCcEEEEEEEcCCCC
Confidence 45677788887 78999999999998542211 122222 26689999999999999999997 321
Q ss_pred -------------------CCC------C---CCCCCcEEEEEEeE---------Ee------cC---------------
Q psy534 82 -------------------RSP------N---SHKNGTWFHLDVHG---------VF------ND--------------- 103 (145)
Q Consensus 82 -------------------~~~------~---~~~~g~~~~l~c~~---------~~------~~--------------- 103 (145)
.+| . ....|+.+.|.|.. +. ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~ 267 (315)
T 1itb_B 188 KQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP 267 (315)
T ss_dssp EEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCS
T ss_pred cEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeecc
Confidence 011 1 13458899999981 00 00
Q ss_pred --------CcEEEEcccCCCC-CeeeEEEEecCCC
Q psy534 104 --------GTELRISNIRSQD-IGDYTCLATHVLY 129 (145)
Q Consensus 104 --------~~~L~i~~v~~~d-~G~Y~C~a~n~~g 129 (145)
...|.|.+++.+| +|.|+|.|.|..|
T Consensus 268 ~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G 302 (315)
T 1itb_B 268 ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 302 (315)
T ss_dssp SCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTC
T ss_pred CCCceeEEEEEEEEeecCHHHcCCceEEEEecCCC
Confidence 1279999999999 9999999999999
No 88
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.45 E-value=5.1e-13 Score=94.35 Aligned_cols=129 Identities=13% Similarity=0.051 Sum_probs=87.2
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
....+..+.+.|.+.+.|.+.+.||++.. .. + ...+.+|+.+.. .....+|.|.+++.+|+|.|+|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C 88 (242)
T 2znx_A 12 SVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSG---SGTDFTLSINSVETEDFGMYFC 88 (242)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE---ETTEEEEEESSCCGGGCEEEEE
T ss_pred EEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEec---CCCEEEEEECCCChHHCEEEEE
Confidence 34567888999999999889999998641 10 0 012345666532 1346789999999999999999
Q ss_pred EEEEec-----------C--CC---------------------CCCCCCcEEEEEEeEE-----------ec--------
Q psy534 76 KVVFLN-----------R--SP---------------------NSHKNGTWFHLDVHGV-----------FN-------- 102 (145)
Q Consensus 76 ~~~~~~-----------~--~~---------------------~~~~~g~~~~l~c~~~-----------~~-------- 102 (145)
.+.+.. + ++ .....|+.+.|.|... +.
T Consensus 89 ~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~ 168 (242)
T 2znx_A 89 QQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLE 168 (242)
T ss_dssp EECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEE
T ss_pred eEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcE
Confidence 985421 0 11 0123588999999821 00
Q ss_pred -------C--------------------C--cEEEEcccCCCCCeeeEEEEecC--CC--CcEEEEeCe
Q psy534 103 -------D--------------------G--TELRISNIRSQDIGDYTCLATHV--LY--PDLLVVLGS 138 (145)
Q Consensus 103 -------~--------------------~--~~L~i~~v~~~d~G~Y~C~a~n~--~g--~~~~v~~~~ 138 (145)
+ + .+|.|.+++.+|+|.|+|.|.|. +| ..+.|...-
T Consensus 169 ~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~fG~gt~l~v~~~~ 237 (242)
T 2znx_A 169 YMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGDYXGQGTLVTVSAAH 237 (242)
T ss_dssp EEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSSCBCCCEEEEECCC-
T ss_pred EEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCcccCCCeEEEEEecc
Confidence 0 0 26999999999999999999984 34 555554433
No 89
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.45 E-value=5e-13 Score=96.22 Aligned_cols=117 Identities=15% Similarity=0.220 Sum_probs=81.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCC----cc-------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPT----HE-------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~----~~-------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+..+.+.|.+.+.|.+.+.||++... .+ ...+.+|+.+.. .....+|.|.+++.+|+|.|+|.
T Consensus 24 v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~DsG~Y~C~ 100 (276)
T 3auv_A 24 ASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG---SGTDFTLTISSLQPEDFATYYCQ 100 (276)
T ss_dssp CCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEEEEEE
T ss_pred EcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEec---cCCeEEEEEccCChhhCEEEEEE
Confidence 45677888899999998899999986421 00 012345666532 13467899999999999999999
Q ss_pred EEEec-----------C--CCC----------------------CCCCCcEEEEEEeEE-----------ecC-------
Q psy534 77 VVFLN-----------R--SPN----------------------SHKNGTWFHLDVHGV-----------FND------- 103 (145)
Q Consensus 77 ~~~~~-----------~--~~~----------------------~~~~g~~~~l~c~~~-----------~~~------- 103 (145)
+.+.. + .+. ....|+.+.|.|... +..
T Consensus 101 ~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~ 180 (276)
T 3auv_A 101 QHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLE 180 (276)
T ss_dssp ECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEE
T ss_pred EecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcE
Confidence 95421 1 110 013488999999820 000
Q ss_pred -------------------------------CcEEEEcccCCCCCeeeEEEEecC
Q psy534 104 -------------------------------GTELRISNIRSQDIGDYTCLATHV 127 (145)
Q Consensus 104 -------------------------------~~~L~i~~v~~~d~G~Y~C~a~n~ 127 (145)
...|.|.+++.+|+|.|+|.|.|.
T Consensus 181 ~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 181 WVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 016999999999999999999997
No 90
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.45 E-value=3.5e-13 Score=97.64 Aligned_cols=116 Identities=19% Similarity=0.187 Sum_probs=78.3
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCC-CCCEEEEEEEEEecC-----
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRE-SDQGWYECKVVFLNR----- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~-~D~G~Y~C~~~~~~~----- 82 (145)
..+.++.+.|-+.|.|.|.+.|++++..... .|...... ......+|.|.+++. +|+|.|+|.+.+...
T Consensus 19 ~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~----~~~~~~~~-~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~ 93 (304)
T 2yd9_A 19 VSGGVASFVCQATGDPKPRVTWNKKGKKVNS----QRFETIEF-DESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVH 93 (304)
T ss_dssp ETTSCEEEEEEEECSSCCEEEEC-------C----TTEEEEEE-TTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCE
T ss_pred cCCCeEEEEEEEEEeCCCeEEEEECCEECCC----CceEEEEe-cCCCceEEEEecccccCCCeEEEEEEECCCCeEEEE
Confidence 4567888999999999999999999854321 23332210 011247899999998 999999999964320
Q ss_pred -----------C---CC--------CCCCCcEEEEEEeE---------E-----------------ecCCcEEEEcccCC
Q psy534 83 -----------S---PN--------SHKNGTWFHLDVHG---------V-----------------FNDGTELRISNIRS 114 (145)
Q Consensus 83 -----------~---~~--------~~~~g~~~~l~c~~---------~-----------------~~~~~~L~i~~v~~ 114 (145)
+ +. ....|+.+.|.|.. + ......|.|.+++.
T Consensus 94 ~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 173 (304)
T 2yd9_A 94 AKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEE 173 (304)
T ss_dssp EEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCG
T ss_pred EEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCc
Confidence 0 10 01248899999981 0 11223799999999
Q ss_pred CCCeeeEEEEecCCC
Q psy534 115 QDIGDYTCLATHVLY 129 (145)
Q Consensus 115 ~d~G~Y~C~a~n~~g 129 (145)
+|+|.|+|.|.|..|
T Consensus 174 ~d~G~Y~C~a~n~~g 188 (304)
T 2yd9_A 174 TDQGKYECVATNSAG 188 (304)
T ss_dssp GGCEEEEEEEEETTE
T ss_pred ccCEEEEEEEEeCCC
Confidence 999999999999987
No 91
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.45 E-value=8e-13 Score=93.32 Aligned_cols=107 Identities=21% Similarity=0.236 Sum_probs=79.6
Q ss_pred hhccceeeEEee-cCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 9 SIFQMLSVGDFA-DDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 9 ~~~~~~~~~~w~-~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
..+.++.+.|.+ .+.|.+.+.|++++... ... .....|.|.+++.+|+|.|.|.+.+..
T Consensus 95 ~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~---------~~~-----~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 160 (262)
T 3rjd_A 95 TEGEPLALRCHAWKDKLVYNVLYYRNGKAF---------KFF-----HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG 160 (262)
T ss_dssp ETTSCEEEEEEEGGGCCCEEEEEEETTEEE---------EEE-----EECCCEEESSCCGGGCEEEEEEEESSSEEEEEC
T ss_pred ecCCeEEEEEEccCCCCCceEEEEECCccc---------ccc-----CCCCeEEEEECChhhCEEEEEEEeCCCCccccc
Confidence 356778889999 58899999999987431 110 126789999999999999999995422
Q ss_pred ----C-----CC------C-CCCCCcEEEEEEeEE-----------e------------cCCcEEEEcccCCCCCeeeEE
Q psy534 82 ----R-----SP------N-SHKNGTWFHLDVHGV-----------F------------NDGTELRISNIRSQDIGDYTC 122 (145)
Q Consensus 82 ----~-----~~------~-~~~~g~~~~l~c~~~-----------~------------~~~~~L~i~~v~~~d~G~Y~C 122 (145)
+ ++ . ....|+.+.|.|... + .....|.|.+++.+|+|.|+|
T Consensus 161 ~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 240 (262)
T 3rjd_A 161 ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWC 240 (262)
T ss_dssp EEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEEESCCEEEESSCCGGGCEEEEE
T ss_pred eEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecccCCCceEEEEEechhhCeEEEE
Confidence 0 11 1 123588999999820 0 123478999999999999999
Q ss_pred EEecCCC
Q psy534 123 LATHVLY 129 (145)
Q Consensus 123 ~a~n~~g 129 (145)
.|.|..|
T Consensus 241 ~a~n~~G 247 (262)
T 3rjd_A 241 EAATEDG 247 (262)
T ss_dssp EEEETTS
T ss_pred EEEcccC
Confidence 9999998
No 92
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.45 E-value=9e-14 Score=99.82 Aligned_cols=112 Identities=13% Similarity=0.090 Sum_probs=77.9
Q ss_pred hhccceeeEEeecCCCc--cEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-----
Q psy534 9 SIFQMLSVGDFADDEDI--PVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN----- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~--p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~----- 81 (145)
..+.++.+.|-+.+ |. +.+.|++++...+. ...+..+ ..+..|.|.+++.+|+|.|+|.+.+..
T Consensus 102 ~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~--~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s 172 (292)
T 4dkd_C 102 FEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLM--RHTNYSF------SPWHGFTIHRAKFIQSQDYQCSALMGGRKVMS 172 (292)
T ss_dssp ETTSCEECCEEESS-GGGGSSEEEEEGGGCCCC--SSCCEEC------CSSSCCEETTCCGGGCSEEEEEECSTTSCEEC
T ss_pred cCCCcEEEeeeCCC-CCcceeEEEEecCCCccc--cCCcccc------cCCceEEECCCCHHHCeEEEEEEEeCCCceeE
Confidence 34567778888887 44 78999987433221 1223333 225569999999999999999995321
Q ss_pred ------C------CC------C--CCCCCcEEEEEEeEE----------ecC-------------------CcEEEEccc
Q psy534 82 ------R------SP------N--SHKNGTWFHLDVHGV----------FND-------------------GTELRISNI 112 (145)
Q Consensus 82 ------~------~~------~--~~~~g~~~~l~c~~~----------~~~-------------------~~~L~i~~v 112 (145)
+ +| . ....|+.+.|.|... ..+ ...|.|.++
T Consensus 173 ~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 252 (292)
T 4dkd_C 173 ISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQV 252 (292)
T ss_dssp CCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECcc
Confidence 0 11 0 124699999999820 000 127999999
Q ss_pred CCCCCeeeEEEEecCCC
Q psy534 113 RSQDIGDYTCLATHVLY 129 (145)
Q Consensus 113 ~~~d~G~Y~C~a~n~~g 129 (145)
+.+|+|.|+|.|.|..|
T Consensus 253 ~~~d~G~Y~C~a~N~~g 269 (292)
T 4dkd_C 253 DFQHAGNYSCVASNVQG 269 (292)
T ss_dssp CTTSCEEEEEEEECSSC
T ss_pred ChhcCeEEEEEEecCCC
Confidence 99999999999999999
No 93
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.45 E-value=4.6e-13 Score=95.03 Aligned_cols=130 Identities=13% Similarity=0.194 Sum_probs=86.0
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCC-CC---------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSY-PT---------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~-~~---------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+..+.+-|.+.|.+ .+.+.||+.. .. .....+.+|+.+..+ ......+|.|.+++.+|
T Consensus 13 v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D 91 (253)
T 3uzq_A 13 VKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITAD-TSSNTAYLHLSSLTSGD 91 (253)
T ss_dssp ECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred ecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEee-cCCCeEEEEeCCCCccc
Confidence 45677888889888754 6788998832 11 111234567766432 22346779999999999
Q ss_pred CEEEEEEEEEec-----------CCC---------------C----------CCCCCcEEEEEEeE-----E--------
Q psy534 70 QGWYECKVVFLN-----------RSP---------------N----------SHKNGTWFHLDVHG-----V-------- 100 (145)
Q Consensus 70 ~G~Y~C~~~~~~-----------~~~---------------~----------~~~~g~~~~l~c~~-----~-------- 100 (145)
+|.|+|.+.+.. +.. . ....|+.+.|.|.. .
T Consensus 92 sG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W 171 (253)
T 3uzq_A 92 TAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHW 171 (253)
T ss_dssp CEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEE
T ss_pred CEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEE
Confidence 999999995411 010 0 12359999999971 0
Q ss_pred ecC-------------------------------CcEEEEcccCCCCCeeeEEEEecCCC------CcEEEEeCe
Q psy534 101 FND-------------------------------GTELRISNIRSQDIGDYTCLATHVLY------PDLLVVLGS 138 (145)
Q Consensus 101 ~~~-------------------------------~~~L~i~~v~~~d~G~Y~C~a~n~~g------~~~~v~~~~ 138 (145)
+.. ..+|.|.+++.+|+|.|+|.|.|..+ ..|.|....
T Consensus 172 ~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~ 246 (253)
T 3uzq_A 172 YQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPL 246 (253)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC-
T ss_pred EEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCC
Confidence 000 01499999999999999999998543 666665544
No 94
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.44 E-value=1.4e-13 Score=95.17 Aligned_cols=119 Identities=17% Similarity=0.159 Sum_probs=80.3
Q ss_pred hhhccceeeEEeecCC-CccEEEEecCC---CC------------cccccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 8 KSIFQMLSVGDFADDE-DIPVYIWYDSY---PT------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~-p~p~~~w~k~~---~~------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
+..+.++.+-|.+.+. |.+.+.|||.. .. .....+.+|+.+.. ..++++|.|.+++.+|+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 12 FSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS---SGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE---ETTEEEEEESSCCGGGCE
T ss_pred ECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec---CCceEEEEEccCCcccCE
Confidence 3457788889999888 88999999832 11 11223445666542 245788999999999999
Q ss_pred EEEEEEEEec---------------C--CC-C-C----------CCCCcEEEEEEeE-----------EecCC-------
Q psy534 72 WYECKVVFLN---------------R--SP-N-S----------HKNGTWFHLDVHG-----------VFNDG------- 104 (145)
Q Consensus 72 ~Y~C~~~~~~---------------~--~~-~-~----------~~~g~~~~l~c~~-----------~~~~~------- 104 (145)
.|+|.+.+.. + .+ . + ...+..+.|.|.. +..++
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 168 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGV 168 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC----
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCce
Confidence 9999996532 0 00 0 0 0126789999981 01111
Q ss_pred ---------------cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 ---------------TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ---------------~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.....+|+|.|+|.|+|..+
T Consensus 169 ~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 208 (218)
T 3s96_B 169 DTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGD 208 (218)
T ss_dssp ----------CEEEEEEEEEEHHHHHTCSCEEEEEEETTE
T ss_pred ecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCC
Confidence 1266677777789999999999976
No 95
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.44 E-value=3.6e-13 Score=95.73 Aligned_cols=130 Identities=17% Similarity=0.159 Sum_probs=84.9
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC-C---------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP-T---------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~---------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+-|-+.|.+ .+.+.||+... . .....+.+|+.+..+ ......+|.|.+++.+|
T Consensus 14 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D 92 (256)
T 3umt_A 14 VKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVD-KSSSTAYLELRSLTSED 92 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred EcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEe-cCCCEEEEEECCCCccc
Confidence 45677788888888765 67888987431 1 011234567766432 12336679999999999
Q ss_pred CEEEEEEEEEe----c----------CCC----------------C----------CCCCCcEEEEEEeE---------E
Q psy534 70 QGWYECKVVFL----N----------RSP----------------N----------SHKNGTWFHLDVHG---------V 100 (145)
Q Consensus 70 ~G~Y~C~~~~~----~----------~~~----------------~----------~~~~g~~~~l~c~~---------~ 100 (145)
+|.|+|.+.+. . +.. . ....|+.++|.|.. +
T Consensus 93 sG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W 172 (256)
T 3umt_A 93 SAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSNLNW 172 (256)
T ss_dssp CEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEE
T ss_pred CEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEE
Confidence 99999999654 0 010 1 02349999999981 1
Q ss_pred ec-------------------------------CCcEEEEcccCCCCCeeeEEEEecCC------CCcEEEEeCe
Q psy534 101 FN-------------------------------DGTELRISNIRSQDIGDYTCLATHVL------YPDLLVVLGS 138 (145)
Q Consensus 101 ~~-------------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~------g~~~~v~~~~ 138 (145)
+. ...+|.|.+++.+|+|.|+|.|.|.. |..|.|....
T Consensus 173 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 173 LQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp EEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred EEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCC
Confidence 00 01139999999999999999999853 2666665544
No 96
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.44 E-value=8.1e-13 Score=94.09 Aligned_cols=130 Identities=17% Similarity=0.208 Sum_probs=88.8
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---Cc-c-----------cccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---TH-E-----------AEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~-~-----------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
...+..+.+.|-+.|.| .+.+.||++.. .. + ...+.+|+.+..+ ...+..+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~Ds 90 (257)
T 1f3r_B 12 VRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRD-TSKNQVFLKMNSLQTDDT 90 (257)
T ss_dssp ECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEE-TTTTEEEEEEESCCTTCC
T ss_pred ccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEE-CCCCEEEEEECCCCcccC
Confidence 45677889999998875 68899998631 10 0 1224567776432 224578999999999999
Q ss_pred EEEEEEEEEec-------------------C--CC-------------C----------CCCCCcEEEEEEeE-------
Q psy534 71 GWYECKVVFLN-------------------R--SP-------------N----------SHKNGTWFHLDVHG------- 99 (145)
Q Consensus 71 G~Y~C~~~~~~-------------------~--~~-------------~----------~~~~g~~~~l~c~~------- 99 (145)
|.|.|.+.+.. + .+ . ....|+.+.|.|..
T Consensus 91 G~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 170 (257)
T 1f3r_B 91 GTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNY 170 (257)
T ss_dssp EEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBTC
T ss_pred EEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCCc
Confidence 99999996540 0 11 0 02348899999981
Q ss_pred --Eec-------------------------------CCcEEEEcccCCCCCeeeEEEEecCC-----CCcEEEEeCe
Q psy534 100 --VFN-------------------------------DGTELRISNIRSQDIGDYTCLATHVL-----YPDLLVVLGS 138 (145)
Q Consensus 100 --~~~-------------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~-----g~~~~v~~~~ 138 (145)
+.. ....|.|.+++.+|+|.|+|.|.|.. |..|.|....
T Consensus 171 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 171 LAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAAE 247 (257)
T ss_dssp EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSSC
T ss_pred EEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCCC
Confidence 110 01259999999999999999999963 3555554443
No 97
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.44 E-value=9.2e-13 Score=95.23 Aligned_cols=116 Identities=14% Similarity=0.083 Sum_probs=81.4
Q ss_pred hccceeeEEeec-CCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 10 IFQMLSVGDFAD-DEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 10 ~~~~~~~~~w~~-g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
.+..+.+.|.+. +.|.+.+.|++++... ... .|..+..+ ...+..+|.|.+++.+|+|.|.|.+.+...
T Consensus 121 ~G~~v~l~C~~~~~~p~~~v~W~~~~~~i-~~~--~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 196 (312)
T 2y23_A 121 EKGQVRFWMQAEKLSGNAKVNYIFNEKEI-FEG--PKYKMHID-RNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTV 196 (312)
T ss_dssp SSSCEEEEEEESCCCSSCEEEEEETTEEE-CSS--SSCEEEEE-TTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEE
T ss_pred eCCCEEEEEEEEeCCCCCEEEEEECCEEC-eeC--CcEEEEEc-cCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEE
Confidence 345677789988 8999999999998542 221 23333211 113356699999999999999998743210
Q ss_pred -------------------------CCC-------CCCCCcEEEEEEeE----------Ee--------------cCC-c
Q psy534 83 -------------------------SPN-------SHKNGTWFHLDVHG----------VF--------------NDG-T 105 (145)
Q Consensus 83 -------------------------~~~-------~~~~g~~~~l~c~~----------~~--------------~~~-~ 105 (145)
+|. ....|+.+.|.|.. +. ..+ .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~ 276 (312)
T 2y23_A 197 VLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGIC 276 (312)
T ss_dssp EECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC----CEE
T ss_pred EEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEE
Confidence 121 23458999999981 00 011 4
Q ss_pred EEEEcccCCCCCeeeEEEEecCCC
Q psy534 106 ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 106 ~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|.|.+++.+|+|.|+|.|.|..|
T Consensus 277 ~L~I~~v~~~d~G~Y~C~a~N~~G 300 (312)
T 2y23_A 277 TLLITEFSKKDAGIYEVILKDDRG 300 (312)
T ss_dssp EEEECSCSGGGCEEEEEEEESTTC
T ss_pred EEEECcCCHHHCEEEEEEEEcCCC
Confidence 799999999999999999999999
No 98
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.44 E-value=1.4e-12 Score=102.17 Aligned_cols=121 Identities=19% Similarity=0.338 Sum_probs=85.6
Q ss_pred hhhccceeeEEeecCCCcc---EEEEecCCCCc-----------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 8 KSIFQMLSVGDFADDEDIP---VYIWYDSYPTH-----------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p---~~~w~k~~~~~-----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
...+.++.+.|-+.+.|.+ .+.|+|++... ....+.+|+.+... ...+..+|.|.+++.+|+|.|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~g~~~L~I~~v~~~D~G~Y 90 (585)
T 2ocw_A 12 SVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNF-PENGTFVVNIAQLSQDDSGRY 90 (585)
T ss_pred EecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEec-CCCCEEEEEECCCCcccCEEE
Confidence 4556788889998887654 78999987421 12345678776421 223467899999999999999
Q ss_pred EEEEEEecC------------CCC--------CCCCCcEEEEEEeE----------Eec---------------------
Q psy534 74 ECKVVFLNR------------SPN--------SHKNGTWFHLDVHG----------VFN--------------------- 102 (145)
Q Consensus 74 ~C~~~~~~~------------~~~--------~~~~g~~~~l~c~~----------~~~--------------------- 102 (145)
+|.+.+... +|. ....|+.+.|.|.. ++.
T Consensus 91 ~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~ 170 (585)
T 2ocw_A 91 KCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYT 170 (585)
T ss_pred EEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCcccc
Confidence 999854321 111 12358899999981 110
Q ss_pred -------CCc-----EEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 -------DGT-----ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 -------~~~-----~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
++. .|.|.+++.+|+|.|+|.|.|..|
T Consensus 171 ~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g 209 (585)
T 2ocw_A 171 GRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSN 209 (585)
T ss_pred CcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCc
Confidence 011 699999999999999999999987
No 99
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.44 E-value=2e-12 Score=101.35 Aligned_cols=119 Identities=18% Similarity=0.257 Sum_probs=83.4
Q ss_pred hhccceeeEEeecCCCccEE----EEec--CCC--Ccc------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVY----IWYD--SYP--THE------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~----~w~k--~~~--~~~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
..+.++.+.|.+.|.|.|.+ .|++ ++. ... ...+.+|+.+..+ ...+..+|.|.+++.+|+|.|.
T Consensus 344 ~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~-~~~g~~~L~I~~v~~~D~G~Y~ 422 (585)
T 2ocw_A 344 VAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEE-PGNGTFTVILNQLTSRDAGFYW 422 (585)
T ss_pred EeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEecc-CCCcEEEEEECCCChhhCEEEE
Confidence 35677888899999998876 7998 664 222 1234567766431 1223456999999999999999
Q ss_pred EEEEEecC-------------CCC-------CCCCCcEEEEEEeE-------------Eec-------------------
Q psy534 75 CKVVFLNR-------------SPN-------SHKNGTWFHLDVHG-------------VFN------------------- 102 (145)
Q Consensus 75 C~~~~~~~-------------~~~-------~~~~g~~~~l~c~~-------------~~~------------------- 102 (145)
|.+ +... ++. ....|+.+.|.|.. +..
T Consensus 423 C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~ 501 (585)
T 2ocw_A 423 CLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVN 501 (585)
T ss_pred Ecc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEE
Confidence 988 3210 111 12358899999951 000
Q ss_pred ---CC--cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 ---DG--TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 ---~~--~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.+ ..|.|.+++.+|+|.|+|.|.|..|
T Consensus 502 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 533 (585)
T 2ocw_A 502 CDENSRLVSLTLNLVTRADEGWYWCGVKQGHF 533 (585)
T ss_pred ecCcccEEEEEECCCCcccCeEEEEEeEeCCC
Confidence 01 3799999999999999999999987
No 100
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.43 E-value=1.2e-12 Score=88.21 Aligned_cols=109 Identities=17% Similarity=0.251 Sum_probs=76.5
Q ss_pred hhhccceeeEEeecCCCcc--EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec----
Q psy534 8 KSIFQMLSVGDFADDEDIP--VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN---- 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p--~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~---- 81 (145)
...+.++.+.|-+.|.|.| .+.|++++..... . ........|.|. +.+|+|.|.|.+.+..
T Consensus 10 v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~-~----------~~~~~~~~l~i~--~~~d~G~Y~C~~~n~~~~~~ 76 (184)
T 3b5h_A 10 EDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKE-D----------ALPGQKTEFKVD--SDDQWGEYSCVFLPEPMGTA 76 (184)
T ss_dssp EEETTEEEEEEEEESCSSCCCEEEEESSSEEEEC-T----------TCCCSEEEEEEC--GGGCCEEEEEEEESTTSCEE
T ss_pred EecCCCEEEEEECCCCCCCceEEEEEeCCEEeec-c----------cccCCcEEEEEe--chhhCeEEEEEEECCcCcEE
Confidence 3567788999998887777 8999998743211 1 011225567777 6999999999997421
Q ss_pred ---C--CCC--------CCCCCcEEEEEEeE----------Eec----------CC-------------cEEEEcccC-C
Q psy534 82 ---R--SPN--------SHKNGTWFHLDVHG----------VFN----------DG-------------TELRISNIR-S 114 (145)
Q Consensus 82 ---~--~~~--------~~~~g~~~~l~c~~----------~~~----------~~-------------~~L~i~~v~-~ 114 (145)
+ +|. ....|+.+.|.|.. +.. .. ..|.|.+++ .
T Consensus 77 ~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 156 (184)
T 3b5h_A 77 NIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNME 156 (184)
T ss_dssp EEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTT
T ss_pred EEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecccc
Confidence 1 111 13458899999971 111 00 279999999 9
Q ss_pred CCCeeeEEEEecCCC
Q psy534 115 QDIGDYTCLATHVLY 129 (145)
Q Consensus 115 ~d~G~Y~C~a~n~~g 129 (145)
+|+|.|+|.|.|..|
T Consensus 157 ~d~G~Y~C~a~N~~g 171 (184)
T 3b5h_A 157 ADPGQYRCNGTSSKG 171 (184)
T ss_dssp TSSEEEEEEEEETTE
T ss_pred ccCceEEEEEEeCCC
Confidence 999999999999998
No 101
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.43 E-value=4.3e-13 Score=94.72 Aligned_cols=106 Identities=16% Similarity=0.166 Sum_probs=80.2
Q ss_pred hhhccceeeEEeecCCCcc-EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 8 KSIFQMLSVGDFADDEDIP-VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p-~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
...+.++.+.|.+.+.|.+ .+.|++++.. +. ..+.+|.|.+++.+|+|.|.|++.+...
T Consensus 13 v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~-~~---------------~~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~ 76 (262)
T 3rjd_A 13 VFQEETVTLHCEVLHLPGSSSTQWFLNGTA-TQ---------------TSTPSYRITSASVNDSGEYRCQRGLSGRSDPI 76 (262)
T ss_dssp EETTCCEEEEEECSSCCCTTCEEEEETTEE-CS---------------CCSSEEEESSCCGGGCEEEEEEESSSCCCCCE
T ss_pred eeCCCeEEEEEECCCCCCCceEEEEECCEE-ee---------------ccCCeEEEecCCcccCeEEEEEEecCCccccE
Confidence 3467788999999998887 9999998743 11 1267899999999999999999954221
Q ss_pred ------------C-CCCCCCCcEEEEEEeE----------E---------ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 ------------S-PNSHKNGTWFHLDVHG----------V---------FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 ------------~-~~~~~~g~~~~l~c~~----------~---------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ......|+.+.|.|.. . ......|.|.+++.+|+|.|+|.|.|..+
T Consensus 77 ~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~ 155 (262)
T 3rjd_A 77 QLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHR 155 (262)
T ss_dssp EEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEESSSE
T ss_pred EEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhCEEEEEEEeCCCC
Confidence 0 1112468999999982 0 11134799999999999999999999886
No 102
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.43 E-value=8.3e-13 Score=95.72 Aligned_cols=119 Identities=20% Similarity=0.227 Sum_probs=81.4
Q ss_pred hhccceeeEEeec-CCCccEEEEecCCCC--------------cccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 9 SIFQMLSVGDFAD-DEDIPVYIWYDSYPT--------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 9 ~~~~~~~~~~w~~-g~p~p~~~w~k~~~~--------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
..+..+.+.|-+. +.+.+.+.|+|++.. .....+++|+.+.. ...++++|.|.+++.+|+|.|
T Consensus 12 ~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~sL~I~~v~~~D~G~Y 89 (308)
T 4fom_A 12 VWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKN--YSLNDATITLHNIGFSDSGKY 89 (308)
T ss_dssp ETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESC--CSSSBCCEEECSCCGGGCEEE
T ss_pred EcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeec--cCCCceEEEEccCCHHHCEEE
Confidence 3466777888776 446667899876432 12334566776532 234578999999999999999
Q ss_pred EEEEEEec-------------C--------CCCC--CCCCcEEEEEEeEE----------e-------------cC----
Q psy534 74 ECKVVFLN-------------R--------SPNS--HKNGTWFHLDVHGV----------F-------------ND---- 103 (145)
Q Consensus 74 ~C~~~~~~-------------~--------~~~~--~~~g~~~~l~c~~~----------~-------------~~---- 103 (145)
+|++.+.. . .+.. ...+..+.|.|... . ..
T Consensus 90 ~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~ 169 (308)
T 4fom_A 90 ICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETAT 169 (308)
T ss_dssp EEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEE
T ss_pred EEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeeccc
Confidence 99996531 0 1111 23478899999610 0 01
Q ss_pred -CcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 -GTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 -~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
...|.|..+..+|+|.|+|.|.|..|
T Consensus 170 ~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 196 (308)
T 4fom_A 170 IISQYKLFPTRFARGRRITCVVKHPAL 196 (308)
T ss_dssp EEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred ccccceEEeeeecCCccEEEEEEccCC
Confidence 12588999999999999999999876
No 103
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.43 E-value=1.7e-12 Score=102.97 Aligned_cols=112 Identities=18% Similarity=0.306 Sum_probs=82.5
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|-+.+ |.+.+.|++++.... ...|+.+.. .+.+|.|.+++.+|+|.|.|.+.+...
T Consensus 480 ~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~---~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~ 550 (642)
T 1e07_A 480 EDKDAVAFTCEPEA-QNTTYLWWVNGQSLP---VSPRLQLSN-----GNRTLTLFNVTRNDARAYVCGIQNSVSANRSDP 550 (642)
T ss_pred cCCCeEEEEEECCC-CCcEEEEEECCEeCC---CCCcEEEcC-----CCcEEEEeecChhcCceEEEEeEcCCCCccCCC
Confidence 35667777888774 788999999985421 234555432 367999999999999999999975421
Q ss_pred -------CCC---------CCCCCcEEEEEEeE---------E------ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 -------SPN---------SHKNGTWFHLDVHG---------V------FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 -------~~~---------~~~~g~~~~l~c~~---------~------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|. ....|+.+.|.|.. + ...+..|.|.+++.+|+|.|+|.|.|.+|
T Consensus 551 ~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~N~~G 628 (642)
T 1e07_A 551 VTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTYACFVSNLAT 628 (642)
T ss_pred EEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccCceEEECcccccCCeEEEEEEEeccc
Confidence 111 12348899999982 1 12234799999999999999999999998
No 104
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.43 E-value=1.5e-12 Score=89.38 Aligned_cols=112 Identities=11% Similarity=0.182 Sum_probs=75.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|.+.+ +.+.+.|||++..........+... ...++.|.|.+++.+|+|.|+|.+.+..
T Consensus 19 v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~-----~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~ 92 (201)
T 1nkr_A 19 VKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHD-----GVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVS 92 (201)
T ss_dssp EETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEET-----TEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCC
T ss_pred cCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCC-----CCceEEEEeccCCcccCeEEEEeEecCCCCcccc
Confidence 345677888898874 6789999999754211111111110 1236889999999999999999996421
Q ss_pred C--------------CC------C-CCCCCcEEEEEEeE--------Ee---------------cC---CcEEEEcccCC
Q psy534 82 R--------------SP------N-SHKNGTWFHLDVHG--------VF---------------ND---GTELRISNIRS 114 (145)
Q Consensus 82 ~--------------~~------~-~~~~g~~~~l~c~~--------~~---------------~~---~~~L~i~~v~~ 114 (145)
. .| . ....|+.++|.|.. .. .. ...|.|.+++
T Consensus 93 ~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~- 171 (201)
T 1nkr_A 93 APSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT- 171 (201)
T ss_dssp CCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESSCCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC-
T ss_pred CCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCCCCceEEEEECCcccCcccccccccCCceEEEEEeCCcC-
Confidence 0 01 1 12458999999982 00 01 2368999998
Q ss_pred CCCeeeEEEEecC
Q psy534 115 QDIGDYTCLATHV 127 (145)
Q Consensus 115 ~d~G~Y~C~a~n~ 127 (145)
|+|.|+|.|.+.
T Consensus 172 -d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 172 -HGGTYRCFGSFH 183 (201)
T ss_dssp -SCEEEEEEEEET
T ss_pred -CCeeEEEEEEcC
Confidence 999999999975
No 105
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.43 E-value=1.2e-12 Score=101.56 Aligned_cols=120 Identities=17% Similarity=0.101 Sum_probs=83.8
Q ss_pred hhccceeeEEeecCCCccE-EEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 9 SIFQMLSVGDFADDEDIPV-YIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~-~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
..+.++.+.|-+.|.|.|. +.|++++... ......+..+..+......++|.|.+++.+|+|.|.|.+.+...
T Consensus 224 ~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~ 302 (524)
T 2ec8_A 224 REGEEFTVTCTIKDVSSSVYSTWKRENSQT-KLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVT 302 (524)
T ss_dssp ETTSCEEEEEEEEESSTTCEEEEEETTCSC-CCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEE
T ss_pred EcCCcEEEEEEEecCCCcEEEEEEeCCCCC-ccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEE
Confidence 4566788889999988887 9999998541 11222232222111123378899999999999999999965320
Q ss_pred -------CC-----------CCCCCCcEEEEEEeEE----------e------c----------------CCcEEEEccc
Q psy534 83 -------SP-----------NSHKNGTWFHLDVHGV----------F------N----------------DGTELRISNI 112 (145)
Q Consensus 83 -------~~-----------~~~~~g~~~~l~c~~~----------~------~----------------~~~~L~i~~v 112 (145)
+| .....|+.+.|.|... . . ....|.|.++
T Consensus 303 ~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 382 (524)
T 2ec8_A 303 TTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRL 382 (524)
T ss_dssp EEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSC
T ss_pred EEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeec
Confidence 11 1134589999999810 0 0 0137999999
Q ss_pred CCCCCeeeEEEEecCCC
Q psy534 113 RSQDIGDYTCLATHVLY 129 (145)
Q Consensus 113 ~~~d~G~Y~C~a~n~~g 129 (145)
+.+|+|.|+|.|.|..|
T Consensus 383 ~~~d~G~Y~C~a~N~~g 399 (524)
T 2ec8_A 383 KGTEGGTYTFLVSNSDV 399 (524)
T ss_dssp CGGGCEEEEEEEECSSC
T ss_pred CcccCeEEEEEEEecCc
Confidence 99999999999999998
No 106
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.42 E-value=3.7e-13 Score=95.29 Aligned_cols=119 Identities=16% Similarity=0.113 Sum_probs=81.7
Q ss_pred hhhccceeeEEeecCCC-----ccEEEEecCCC-C-c---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 8 KSIFQMLSVGDFADDED-----IPVYIWYDSYP-T-H---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p-----~p~~~w~k~~~-~-~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
...+.++.+.|-+.|.| .+.+.||+++. . . ....+.+|+.+.. .....+|.|.+++.+|+|
T Consensus 50 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G 126 (254)
T 2c1o_A 50 VTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSG---SGTDFTLKISRVEAEDLG 126 (254)
T ss_dssp ECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCS
T ss_pred ecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEec---CCCEEEEEECcCCcccCE
Confidence 45677888999999887 48999997531 1 1 1223446666532 134679999999999999
Q ss_pred EEEEEEEEec-----------C-----CCCC--------CCCCcEEEEEEeE-----------Ee------cC-------
Q psy534 72 WYECKVVFLN-----------R-----SPNS--------HKNGTWFHLDVHG-----------VF------ND------- 103 (145)
Q Consensus 72 ~Y~C~~~~~~-----------~-----~~~~--------~~~g~~~~l~c~~-----------~~------~~------- 103 (145)
.|+|.+.+.. + +|.. ...|..+.|.|.. +. ..
T Consensus 127 ~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 206 (254)
T 2c1o_A 127 IYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWT 206 (254)
T ss_dssp EEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEEC
T ss_pred EEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccc
Confidence 9999995431 0 1110 1126799999981 00 01
Q ss_pred -----------CcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 -----------GTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 -----------~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
...|.|.++..+|+|.|+|.|.|...
T Consensus 207 ~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 243 (254)
T 2c1o_A 207 DQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 243 (254)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred cccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCC
Confidence 12588999999999999999999875
No 107
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.42 E-value=6.6e-12 Score=86.79 Aligned_cols=117 Identities=12% Similarity=0.015 Sum_probs=81.2
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|.+.|.|.|.+.|+|++.. +......|+.+... ....+|.|.+++.+|+|.|.|.+.+...
T Consensus 31 ~~G~~v~l~C~~~g~p~p~i~W~~~g~~-l~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 106 (215)
T 3mtr_A 31 WEGNQVNITCEVFAYPSATISWFRDGQL-LPSSNYSNIKIYNT---PSASYLEVTPDSENDFGNYNCTAVNRIGQESLEF 106 (215)
T ss_dssp CTTCCEEEEEEEEEESCCEEEEEETTEE-SSCSSSCSEEEEEE---TTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEE
T ss_pred ECCCCEEEEEEEeecCCCEEEEEECCeE-CCCCCCccEEEecC---CCeeEEEEecCChhhCeEEEEEEEECCCceEEEE
Confidence 4567788899999999999999998753 32222234544321 2378899999999999999999965321
Q ss_pred ------CCCC------CCCCcEEEEEEeE---------------Ee-----------------cCCcEEEEcccCCCCCe
Q psy534 83 ------SPNS------HKNGTWFHLDVHG---------------VF-----------------NDGTELRISNIRSQDIG 118 (145)
Q Consensus 83 ------~~~~------~~~g~~~~l~c~~---------------~~-----------------~~~~~L~i~~v~~~d~G 118 (145)
.|.. ...+..+.|.|.. .. .....|.|.++...+.|
T Consensus 107 ~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y 186 (215)
T 3mtr_A 107 ILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTY 186 (215)
T ss_dssp EEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEE
T ss_pred EEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEE
Confidence 1211 1124455555530 00 00147999999999999
Q ss_pred eeEEEEecCCC
Q psy534 119 DYTCLATHVLY 129 (145)
Q Consensus 119 ~Y~C~a~n~~g 129 (145)
.|+|.|.|.+|
T Consensus 187 ~~~~~A~N~~G 197 (215)
T 3mtr_A 187 AVRLAALNGKG 197 (215)
T ss_dssp EEEEEEEESSC
T ss_pred EEEEEEEeCCc
Confidence 99999999998
No 108
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.42 E-value=9.8e-13 Score=93.42 Aligned_cols=130 Identities=18% Similarity=0.226 Sum_probs=85.4
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC-C--------------cccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP-T--------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~-~--------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
...+.++.+-|-+.|. +.+.+.||+... . .....+.+|+.+..+ ......+|.|.+++.+|+
T Consensus 20 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~Ds 98 (257)
T 3gkz_A 20 VKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRD-TSKNQVYLQLKSVSSEDT 98 (257)
T ss_dssp ECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEE-GGGTEEEEEECSCCGGGC
T ss_pred EcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEe-cCCceEEEEECCCChhhC
Confidence 4567788888988863 578899988431 1 011234567766432 113366899999999999
Q ss_pred EEEEEEEEEe--------c------C--C------------CCC----------CCCCcEEEEEEeE----------Eec
Q psy534 71 GWYECKVVFL--------N------R--S------------PNS----------HKNGTWFHLDVHG----------VFN 102 (145)
Q Consensus 71 G~Y~C~~~~~--------~------~--~------------~~~----------~~~g~~~~l~c~~----------~~~ 102 (145)
|.|.|.+.+. . + . +.+ ...|+.++|.|.. ++.
T Consensus 99 G~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 178 (257)
T 3gkz_A 99 ATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQ 178 (257)
T ss_dssp EEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEE
T ss_pred EEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEE
Confidence 9999999763 0 0 1 000 2348999999981 100
Q ss_pred -------------------------------CCcEEEEcccCCCCCeeeEEEEecCCC------CcEEEEeCe
Q psy534 103 -------------------------------DGTELRISNIRSQDIGDYTCLATHVLY------PDLLVVLGS 138 (145)
Q Consensus 103 -------------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g------~~~~v~~~~ 138 (145)
...+|.|.+++.+|+|.|+|.|.+... ..|.|....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~ 251 (257)
T 3gkz_A 179 QKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKRAP 251 (257)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCC-
T ss_pred ECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEeCC
Confidence 011499999999999999999998432 555555433
No 109
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.42 E-value=7.9e-13 Score=89.95 Aligned_cols=115 Identities=9% Similarity=0.096 Sum_probs=72.0
Q ss_pred hhccceeeEEeecC-CCccEEEEecCC-CC-----------cccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 9 SIFQMLSVGDFADD-EDIPVYIWYDSY-PT-----------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 9 ~~~~~~~~~~w~~g-~p~p~~~w~k~~-~~-----------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
..+..+.+-|...+ .+.+.+.|++++ .. ..+..|++|+.+. ..+++|.|.+++.+|+|.|.|
T Consensus 12 ~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~-----~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 12 ITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLD-----KTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp ETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEEC-----TTTCCEEECSCCGGGCEEEEE
T ss_pred EeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEe-----CCCccEEEcCCCHHHCeEEEE
Confidence 34455555565533 345677777742 11 1135577888872 358999999999999999999
Q ss_pred EEEEec---------C--C-CCC--CCCCcEEEEEEeE---------EecC--------CcEEEEcccCCCCCeeeEEEE
Q psy534 76 KVVFLN---------R--S-PNS--HKNGTWFHLDVHG---------VFND--------GTELRISNIRSQDIGDYTCLA 124 (145)
Q Consensus 76 ~~~~~~---------~--~-~~~--~~~g~~~~l~c~~---------~~~~--------~~~L~i~~v~~~d~G~Y~C~a 124 (145)
++.... + + +.+ ...+..+.|.|.. +..+ +.+|.+.. .+|+|.|+|.|
T Consensus 87 ~v~~~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~gp~p~i~W~~~~~~l~~~~~~~l~~~~--~~d~g~Y~C~a 164 (180)
T 2dru_A 87 RMLHETEDQWKITMEVYEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQW--TNLRAPFKCKA 164 (180)
T ss_dssp EEESSSEEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSSCTTCEEEEEETTEEEEEESSSEEEEEC--SCCSSCEEEEE
T ss_pred EEEcCCeEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCCCCCCEEEEEECCeECcCCCCCEEEEEE--hhcCccEEEEE
Confidence 974321 1 1 111 1234568889982 1112 22444422 68999999999
Q ss_pred ecCCCC
Q psy534 125 THVLYP 130 (145)
Q Consensus 125 ~n~~g~ 130 (145)
+|.++.
T Consensus 165 ~N~~~~ 170 (180)
T 2dru_A 165 VNRVSQ 170 (180)
T ss_dssp EETTEE
T ss_pred ecCcCc
Confidence 999983
No 110
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.42 E-value=6.3e-13 Score=94.46 Aligned_cols=73 Identities=19% Similarity=0.217 Sum_probs=50.8
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCCC--C--------------cccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSYP--T--------------HEAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~~--~--------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
+...+.++.+-|-+.+. +.+.+.||+... . .....+.+|+.+..+ ......+|.|.+++.+
T Consensus 17 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~ 95 (256)
T 3juy_B 17 VKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTAD-TSANTAYMELRSLRSA 95 (256)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEE-TTTTEEEEEECSCCGG
T ss_pred eecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEe-cCCCEEEEEECCCCcc
Confidence 34567788888888763 677888986431 0 112335567776522 2244678999999999
Q ss_pred CCEEEEEEEEEe
Q psy534 69 DQGWYECKVVFL 80 (145)
Q Consensus 69 D~G~Y~C~~~~~ 80 (145)
|+|.|.|.+.+.
T Consensus 96 DsG~Y~C~~~~~ 107 (256)
T 3juy_B 96 DTAVYYCARVGE 107 (256)
T ss_dssp GCEEEEEEECCC
T ss_pred cCEEEEEeEEec
Confidence 999999999764
No 111
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.42 E-value=3e-13 Score=99.27 Aligned_cols=114 Identities=16% Similarity=0.078 Sum_probs=83.7
Q ss_pred hhccceeeEEeec-------CCCccEEEEecCCCCc-ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFAD-------DEDIPVYIWYDSYPTH-EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~-------g~p~p~~~w~k~~~~~-~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|-+. +.|.+.+.|++++... +......|+.. .+++|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~n~ 103 (339)
T 3o4o_C 31 LEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWA-------QDGALWLLPALQEDSGTYVCTTRNA 103 (339)
T ss_dssp ETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEE-------ETTEEEESSBCTTCCEEEECCEEET
T ss_pred ECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEe-------eCCeEEECCCCcccCEEEEEEEECC
Confidence 4566778888887 8899999999987542 22333455543 2678999999999999999999653
Q ss_pred c----------C--CC----------CCCCCCcEEEEEEe-----EE---------------e----------cCCcEEE
Q psy534 81 N----------R--SP----------NSHKNGTWFHLDVH-----GV---------------F----------NDGTELR 108 (145)
Q Consensus 81 ~----------~--~~----------~~~~~g~~~~l~c~-----~~---------------~----------~~~~~L~ 108 (145)
. + .+ .....|..+.|.|. .. . .....|.
T Consensus 104 ~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~ 183 (339)
T 3o4o_C 104 SYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLL 183 (339)
T ss_dssp TEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEE
T ss_pred cceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEE
Confidence 2 0 11 11245899999997 10 0 1113799
Q ss_pred EcccCCCCCeeeEEEEecCCC
Q psy534 109 ISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 109 i~~v~~~d~G~Y~C~a~n~~g 129 (145)
|.+++.+|+|.|+|.|.|..|
T Consensus 184 i~~v~~~d~G~Y~C~a~n~~g 204 (339)
T 3o4o_C 184 VHDVALEDAGYYRCVLTFAHE 204 (339)
T ss_dssp ESSCCGGGCEEEEEEEECCBT
T ss_pred EcccCHhhCeEEEEEEEECCC
Confidence 999999999999999999876
No 112
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.42 E-value=4e-12 Score=91.13 Aligned_cols=116 Identities=18% Similarity=0.133 Sum_probs=81.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
...+.++.+.|-+.|.|. .+.|++.++..+. ...|+.+..+ ....+|.|.+++.+|+|.|+|.+.+...
T Consensus 16 v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~--~~~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~ 89 (291)
T 2wim_A 16 LSVGESKFFTCTAIGEPE-SIDWYNPQGEKII--STQRVVVQKE---GVRSRLTIYNANIEDAGIYRCQATDAKGQTQEA 89 (291)
T ss_dssp EETTCCEEEEEEEESCCS-EEECBCTTCCBCC--CBTTEEEEEE---TTEEEEEECSCCGGGCEEEEEEEECSSSCEEEE
T ss_pred ecCCCcEEEEEEEeCCCC-ceEEECCCCcCcc--CCCcEEEecC---CCEEEEEEccCCcccCEEEEEEEecccCceEEE
Confidence 345678888999998875 8999995433222 2234444321 2356899999999999999999965320
Q ss_pred --------CC------C--CCCCCcEEEEEEeE---------E----------------ecCCcEEEEcccCCCCCeeeE
Q psy534 83 --------SP------N--SHKNGTWFHLDVHG---------V----------------FNDGTELRISNIRSQDIGDYT 121 (145)
Q Consensus 83 --------~~------~--~~~~g~~~~l~c~~---------~----------------~~~~~~L~i~~v~~~d~G~Y~ 121 (145)
++ . ....|+.+.|.|.. + ...+..|.|.+++.+|+|.|+
T Consensus 90 ~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 169 (291)
T 2wim_A 90 TVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYR 169 (291)
T ss_dssp EEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEE
T ss_pred EEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEE
Confidence 11 0 12358889999981 0 112347999999999999999
Q ss_pred EEEecCCC
Q psy534 122 CLATHVLY 129 (145)
Q Consensus 122 C~a~n~~g 129 (145)
|.|.|..+
T Consensus 170 C~~~n~~~ 177 (291)
T 2wim_A 170 CEGRVEAR 177 (291)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 99999885
No 113
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.42 E-value=8.1e-13 Score=94.26 Aligned_cols=130 Identities=16% Similarity=0.198 Sum_probs=87.2
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC-Cc---------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP-TH---------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~~---------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+.|.+.|.| .+.+.||++.. .. ....+.+|+.+..+ ...+..+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~D 90 (256)
T 1nqb_A 12 VKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVD-KPSSTAYMQLSSLTSED 90 (256)
T ss_dssp ECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred ecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEe-cCCCEEEEEECcCChhh
Confidence 45677888999998875 67899998531 10 01234577776432 22346899999999999
Q ss_pred CEEEEEEEEEec---------------C--CC------C--CCCCCcEEEEEEeE-----E---------ec--CC----
Q psy534 70 QGWYECKVVFLN---------------R--SP------N--SHKNGTWFHLDVHG-----V---------FN--DG---- 104 (145)
Q Consensus 70 ~G~Y~C~~~~~~---------------~--~~------~--~~~~g~~~~l~c~~-----~---------~~--~~---- 104 (145)
+|.|+|.+.+.. + .+ . ....|+.+.|.|.. . +. .+
T Consensus 91 sG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~ 170 (256)
T 1nqb_A 91 SAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPK 170 (256)
T ss_dssp CEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEE
T ss_pred CEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcE
Confidence 999999997541 0 01 1 12458899999972 0 00 11
Q ss_pred -------------------------cEEEEcccCCCCCeeeEEEEecCC------CCcEEEEeCe
Q psy534 105 -------------------------TELRISNIRSQDIGDYTCLATHVL------YPDLLVVLGS 138 (145)
Q Consensus 105 -------------------------~~L~i~~v~~~d~G~Y~C~a~n~~------g~~~~v~~~~ 138 (145)
..|.|.+++.+|+|.|+|.|.|.. |..|.|....
T Consensus 171 ~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 235 (256)
T 1nqb_A 171 LLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRAA 235 (256)
T ss_dssp EEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC--
T ss_pred EEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECCC
Confidence 158899999999999999999843 2566665443
No 114
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.41 E-value=1.4e-12 Score=91.43 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=80.7
Q ss_pred hhhccceeeEEeecCCC----ccEEEEecCCC---Cc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 8 KSIFQMLSVGDFADDED----IPVYIWYDSYP---TH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p----~p~~~w~k~~~---~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
...+..+.+.|-+.+.| .+.+.||++.. .. ....+.+|+.+.. .....+|.|.+++.+|+|.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~ 89 (240)
T 1moe_A 13 VSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG---SRTDFTLIIDPVEADDVAT 89 (240)
T ss_dssp ECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEE
T ss_pred ecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEe---cCCeEEEEEcCCChhhCEE
Confidence 45677889999999888 88899998631 10 0112345666532 1346689999999999999
Q ss_pred EEEEEEEec-----------C--CC-----C---------CCCCCcEEEEEEeEE-----------ecC-----------
Q psy534 73 YECKVVFLN-----------R--SP-----N---------SHKNGTWFHLDVHGV-----------FND----------- 103 (145)
Q Consensus 73 Y~C~~~~~~-----------~--~~-----~---------~~~~g~~~~l~c~~~-----------~~~----------- 103 (145)
|+|.+.+.. + .+ . ....|+.+.|.|... +..
T Consensus 90 Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~ 169 (240)
T 1moe_A 90 YYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGR 169 (240)
T ss_dssp EEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEE
T ss_pred EEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEE
Confidence 999995431 0 10 0 023488999999821 000
Q ss_pred ---------------------------CcEEEEcccCCCCCeeeEEEEec
Q psy534 104 ---------------------------GTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 104 ---------------------------~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
...|.|.+++.+|+|.|+|.|.+
T Consensus 170 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 170 IDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 02599999999999999999994
No 115
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.41 E-value=8.3e-13 Score=91.67 Aligned_cols=120 Identities=18% Similarity=0.174 Sum_probs=81.5
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC-C-----------------cccccccceEEEecCCCCCCeeeEEEcccCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP-T-----------------HEAEEYKGRISRVDKESPFGMASLNLTKIRE 67 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~-----------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~ 67 (145)
+..+..+.+-|-+.+.+ .+.+.||++.. . ...+.+.+|+.+..+. ..++.+|.|.+++.
T Consensus 12 ~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~v~~ 90 (220)
T 1pz5_B 12 VQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDD-SKSSVYLQMNNLRA 90 (220)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEG-GGTEEEEEECSCCG
T ss_pred EcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeC-CCCeEEEEEccCCH
Confidence 45677888899988766 78899988641 1 0112345787764321 23467999999999
Q ss_pred CCCEEEEEEEEEec-------C------------CC--------CCCCCCcEEEEEEeEE-----------ecCC-----
Q psy534 68 SDQGWYECKVVFLN-------R------------SP--------NSHKNGTWFHLDVHGV-----------FNDG----- 104 (145)
Q Consensus 68 ~D~G~Y~C~~~~~~-------~------------~~--------~~~~~g~~~~l~c~~~-----------~~~~----- 104 (145)
+|+|.|+|.+.+.. . +| .....|..+.|.|... ..++
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~ 170 (220)
T 1pz5_B 91 EDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGV 170 (220)
T ss_dssp GGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTE
T ss_pred HHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccce
Confidence 99999999996531 0 01 0123588999999820 0011
Q ss_pred ---------------cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 ---------------TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ---------------~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|..+..++ |.|+|.|.|..|
T Consensus 171 ~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 209 (220)
T 1pz5_B 171 RTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPAS 209 (220)
T ss_dssp EECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGG
T ss_pred EEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCc
Confidence 236777777766 999999999988
No 116
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.41 E-value=1.6e-12 Score=94.86 Aligned_cols=110 Identities=19% Similarity=0.192 Sum_probs=77.5
Q ss_pred cceeeEEe-ecCCCccEEEEecCCCCccc-cc---ccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC----
Q psy534 12 QMLSVGDF-ADDEDIPVYIWYDSYPTHEA-EE---YKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR---- 82 (145)
Q Consensus 12 ~~~~~~~w-~~g~p~p~~~w~k~~~~~~~-~~---~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~---- 82 (145)
..+.+.|- ..|.|.|.+.|+++...... .. -.+...+ ...|.|.+++.+|+|.|+|.+.+...
T Consensus 151 ~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--------~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 222 (331)
T 3u83_A 151 KVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTV--------ISRYRLVPSREAHQQSLACIVNYHMDRFKE 222 (331)
T ss_dssp CEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEE--------EEEEEECCCGGGTTCEEEEEEEETTEEEEE
T ss_pred ceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEE--------EEEEEEEeccccCCCEEEEEEecCCCccee
Confidence 45788897 77999999999986422110 00 0111111 46689999999999999999965420
Q ss_pred ---------------CC--CCCCCCcEEEEEEeE----------Ee-----------cCCcEEEEc-ccCCCCCeeeEEE
Q psy534 83 ---------------SP--NSHKNGTWFHLDVHG----------VF-----------NDGTELRIS-NIRSQDIGDYTCL 123 (145)
Q Consensus 83 ---------------~~--~~~~~g~~~~l~c~~----------~~-----------~~~~~L~i~-~v~~~d~G~Y~C~ 123 (145)
++ .....|+.+.|.|.. +. ..+..|.|. +++.+|+|.|+|.
T Consensus 223 ~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C~ 302 (331)
T 3u83_A 223 SLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAGTYICE 302 (331)
T ss_dssp EEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECSCCCGGGCEEEEEE
T ss_pred eEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcEEEEeCCCccccCeEEEEE
Confidence 11 113568999999982 00 123479999 9999999999999
Q ss_pred EecCCC
Q psy534 124 ATHVLY 129 (145)
Q Consensus 124 a~n~~g 129 (145)
|.|..|
T Consensus 303 a~N~~G 308 (331)
T 3u83_A 303 ATNPIG 308 (331)
T ss_dssp EEETTE
T ss_pred EEeccc
Confidence 999998
No 117
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.41 E-value=3.2e-13 Score=98.55 Aligned_cols=110 Identities=15% Similarity=0.228 Sum_probs=78.2
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------- 81 (145)
..+.++.+.|-+.|. .+.+.|+|++.... ..... .....+|.|.+++.+|+|.|+|.+.+..
T Consensus 36 ~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~-~~~~~---------~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~ 104 (316)
T 3vh8_G 36 PRGGHVTLRCHYRHR-FNNFMLYKEDRIHI-PIFHG---------RIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSA 104 (316)
T ss_dssp ETTSCEEEEEEBTTB-CCSEEEEESSCSSS-CHHHH---------CCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCC
T ss_pred CCCCCEEEEEEccCC-CceEEEEeCCCccc-eeecC---------CcceEEEEECCCCcccCeEEEEEEEcCCCCcceec
Confidence 456778888988877 67899999985421 11110 1237889999999999999999985311
Q ss_pred --------C---C--C------C-CCCCCcEEEEEEeE--------Ee------------------cCCcEEEEcccCCC
Q psy534 82 --------R---S--P------N-SHKNGTWFHLDVHG--------VF------------------NDGTELRISNIRSQ 115 (145)
Q Consensus 82 --------~---~--~------~-~~~~g~~~~l~c~~--------~~------------------~~~~~L~i~~v~~~ 115 (145)
+ . + . ....|+.+.|.|.. .. .....|.|.+++.+
T Consensus 105 ~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 184 (316)
T 3vh8_G 105 PSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLA 184 (316)
T ss_dssp CCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESSCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGG
T ss_pred CCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCCCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChh
Confidence 0 0 0 0 12358999999982 00 01236999999999
Q ss_pred CCeeeEEEEecCCC
Q psy534 116 DIGDYTCLATHVLY 129 (145)
Q Consensus 116 d~G~Y~C~a~n~~g 129 (145)
|+|.|+|.|.|..|
T Consensus 185 D~G~Y~C~a~n~~g 198 (316)
T 3vh8_G 185 LAGTYRCYGSVTHT 198 (316)
T ss_dssp GCEEEEEEEECTTC
T ss_pred hCceEEEEEecCCC
Confidence 99999999999865
No 118
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.41 E-value=7e-13 Score=90.65 Aligned_cols=120 Identities=15% Similarity=0.133 Sum_probs=79.5
Q ss_pred hhhccceeeEEeec----CCCccEEEEecCCCCc---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 8 KSIFQMLSVGDFAD----DEDIPVYIWYDSYPTH---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 8 ~~~~~~~~~~~w~~----g~p~p~~~w~k~~~~~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
+..+.++.+.|.+. +.|.+.+.|++++... ....+.+|..+. ..++.+|.|.+++.+|+|.|.
T Consensus 6 v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~----~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 6 KEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD----ITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE----STTTTEEEECSCCGGGCEEEE
T ss_pred EEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc----cCCCcEEEEecccchhCeEEE
Confidence 34566777888775 3367788898886432 223466777651 134789999999999999999
Q ss_pred EEEEEec---------------C--C-CCC------CCCCcEEEEEEeEE----------e----------------cCC
Q psy534 75 CKVVFLN---------------R--S-PNS------HKNGTWFHLDVHGV----------F----------------NDG 104 (145)
Q Consensus 75 C~~~~~~---------------~--~-~~~------~~~g~~~~l~c~~~----------~----------------~~~ 104 (145)
|.+.+.. + . +.+ ...|..+.|.|... . ..+
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~ 161 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPET 161 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTT
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCC
Confidence 9997631 0 1 111 13477899999820 0 111
Q ss_pred cEE---EEcccCCCCCeeeEEEEecCCCCc
Q psy534 105 TEL---RISNIRSQDIGDYTCLATHVLYPD 131 (145)
Q Consensus 105 ~~L---~i~~v~~~d~G~Y~C~a~n~~g~~ 131 (145)
..+ .+..+..+|+|.|+|.|.|+.|..
T Consensus 162 ~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~ 191 (201)
T 1dr9_A 162 ELYAVSSKLDFNMTTNHSFMCLIKYGHLRV 191 (201)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEEEETTCCE
T ss_pred cEEEEEEEEEEEecCCCEEEEEEecCccee
Confidence 122 224556789999999999999843
No 119
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.41 E-value=4.3e-13 Score=91.66 Aligned_cols=113 Identities=12% Similarity=0.145 Sum_probs=70.0
Q ss_pred hccceeeEEeec--CCCccEEEEec--CCCCccc--c-----cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 10 IFQMLSVGDFAD--DEDIPVYIWYD--SYPTHEA--E-----EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 10 ~~~~~~~~~w~~--g~p~p~~~w~k--~~~~~~~--~-----~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
.+.++.+-|-.. +.+.+.+.|++ ++..... . ...+|..++ .+++|.|.+++++|+|.|.|++.
T Consensus 13 ~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~------~ngsL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 13 LGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF------KNGTLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp TTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC------TTSCEEECSCCGGGCEEEEEEEE
T ss_pred cCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC------CCCCEEECCCChhhCEEEEEEEE
Confidence 344555544221 35678899988 6543210 0 235677763 37899999999999999999996
Q ss_pred EecC--------------C-CCC--CCCCcEEEEEEeE---------EecCCc-------EEEEcccCCCCCeeeEEEEe
Q psy534 79 FLNR--------------S-PNS--HKNGTWFHLDVHG---------VFNDGT-------ELRISNIRSQDIGDYTCLAT 125 (145)
Q Consensus 79 ~~~~--------------~-~~~--~~~g~~~~l~c~~---------~~~~~~-------~L~i~~v~~~d~G~Y~C~a~ 125 (145)
+... + +.+ ...+..+.|.|.. +..++. .|.+ ....+|+|.|+|.|.
T Consensus 87 n~~g~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l~~~~~~i~~-~~~~~d~G~Y~C~a~ 165 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLKLSQRVITH-KWTTSLSAKFKCTAG 165 (182)
T ss_dssp ETTSCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEEEEESSCEEE-ECCSCEEEEEEEEEE
T ss_pred eCCCceeEEEEEEEEEcCcCCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEECCCCCcEEEE-ecccCCCcEEEEEEE
Confidence 5320 0 111 1123367888971 122222 2232 224789999999999
Q ss_pred cCCC
Q psy534 126 HVLY 129 (145)
Q Consensus 126 n~~g 129 (145)
|.+|
T Consensus 166 N~~~ 169 (182)
T 1hnf_A 166 NKVS 169 (182)
T ss_dssp CSSC
T ss_pred eCCC
Confidence 9998
No 120
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.40 E-value=2.7e-12 Score=88.95 Aligned_cols=120 Identities=15% Similarity=0.141 Sum_probs=80.3
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCC--CCc--------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSY--PTH--------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~--~~~--------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+..+.+.|-+.|.| .+.+.||++. ... ....+.+|+.+..+ ...++++|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~D 90 (219)
T 1c1e_H 12 KKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLE-TSATTAYLQINNLKNED 90 (219)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred ecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEe-cCCCEEEEEECCCCccc
Confidence 45677888899998765 7889999873 111 01235678776432 12346899999999999
Q ss_pred CEEEEEEEEEec--------------C-C-----C--------CCCCCCcEEEEEEeEE-----------ecC-------
Q psy534 70 QGWYECKVVFLN--------------R-S-----P--------NSHKNGTWFHLDVHGV-----------FND------- 103 (145)
Q Consensus 70 ~G~Y~C~~~~~~--------------~-~-----~--------~~~~~g~~~~l~c~~~-----------~~~------- 103 (145)
+|.|+|.+.+.. + . | .....|..+.|.|... ..+
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~ 170 (219)
T 1c1e_H 91 MATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 170 (219)
T ss_dssp CEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred CEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceE
Confidence 999999997631 0 0 1 0123588999999821 001
Q ss_pred --------C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 --------G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 --------~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|. ....|.|.|+|.|.|..+
T Consensus 171 ~~~~~~~~~~~~~~s~L~i~-~~~~d~g~Y~C~a~n~~~ 208 (219)
T 1c1e_H 171 TFPAVLQSDLYTLSSSVTVP-SSPRPSETVTCNVAHPAS 208 (219)
T ss_dssp ECCCEESSSCEEEEEEEEEE-SSSTTTSCCEEEEEEGGG
T ss_pred ecCCcccCCeEEEEEEEEEe-cccCCCCEEEEEEEeCCC
Confidence 1 147773 344467999999999876
No 121
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.40 E-value=2.3e-12 Score=88.83 Aligned_cols=121 Identities=16% Similarity=0.188 Sum_probs=81.3
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC-Cc--------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP-TH--------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~~--------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
.+..+..+.+-|.+.|.| .+.+.||++.. .. ..+.+.+|+.+..+ ...++.+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D 89 (210)
T 3d9a_H 11 LVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRD-TSKNQYYLDLNSVTTED 89 (210)
T ss_dssp EECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEec-CCCCEEEEEECCCCccc
Confidence 345677888899988775 47899988631 10 11235678876432 11235799999999999
Q ss_pred CEEEEEEEEEe---------cC------CC--------CCCCCCcEEEEEEeEE-----------ecCC-----------
Q psy534 70 QGWYECKVVFL---------NR------SP--------NSHKNGTWFHLDVHGV-----------FNDG----------- 104 (145)
Q Consensus 70 ~G~Y~C~~~~~---------~~------~~--------~~~~~g~~~~l~c~~~-----------~~~~----------- 104 (145)
+|.|+|.+.+. .+ .| .....|..+.|.|... ..++
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~ 169 (210)
T 3d9a_H 90 TATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAV 169 (210)
T ss_dssp CEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCE
T ss_pred CEEEEEEEecCcccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCc
Confidence 99999998431 00 11 1123588999999820 0011
Q ss_pred ---------cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 ---------TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ---------~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|..+..+| |.|+|.|.|..|
T Consensus 170 ~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 202 (210)
T 3d9a_H 170 LQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPAS 202 (210)
T ss_dssp EETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGG
T ss_pred cCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCC
Confidence 237888888766 999999999987
No 122
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.40 E-value=8.9e-13 Score=92.41 Aligned_cols=120 Identities=14% Similarity=0.134 Sum_probs=78.9
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC-Cc---c------------cccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP-TH---E------------AEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~~---~------------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+.+ .+.+.||++.. .. + ...+.+|+.+..+. ..++.+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~v~~~D 90 (227)
T 1mju_H 12 VKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDT-SSSTAYMQLSSLTSDD 90 (227)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEET-TTTEEEEEECSCCGGG
T ss_pred EcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeC-CCCeEEEEECCCCccc
Confidence 45677888999988776 67899988641 10 0 12346788775331 3457899999999999
Q ss_pred CEEEEEEEEEec-----------CC------CC--------CCCCCcEEEEEEeEE-----------ecC----------
Q psy534 70 QGWYECKVVFLN-----------RS------PN--------SHKNGTWFHLDVHGV-----------FND---------- 103 (145)
Q Consensus 70 ~G~Y~C~~~~~~-----------~~------~~--------~~~~g~~~~l~c~~~-----------~~~---------- 103 (145)
+|.|+|.+.+.. +. |. ....|..+.|.|... ..+
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~ 170 (227)
T 1mju_H 91 SAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFP 170 (227)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC
T ss_pred CEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECC
Confidence 999999996421 10 10 112488899999821 000
Q ss_pred -----C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 -----G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 -----~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|..+..+| |.|+|.|.|..+
T Consensus 171 ~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 205 (227)
T 1mju_H 171 AVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 205 (227)
T ss_dssp CEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGG
T ss_pred ceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCC
Confidence 1 247777877777 999999999764
No 123
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.40 E-value=2.2e-12 Score=94.73 Aligned_cols=112 Identities=18% Similarity=0.177 Sum_probs=82.3
Q ss_pred hhccceeeEEeecCCC-ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe--c--C-
Q psy534 9 SIFQMLSVGDFADDED-IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL--N--R- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p-~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~--~--~- 82 (145)
..+..+.+.|-+.|.| .|.+.|+|++.... .-..|+.. .+.+|.|.+++.+|+|.|+|.+.+. . .
T Consensus 141 ~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~--~~~~~~~~-------~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~ 211 (329)
T 3oq3_B 141 HDKYGIDLYCGILYAKHYNNITWYKNNQELI--IDGTKYSQ-------SGQNLIIHNPELEDSGRYDCYVHYDDVRIKND 211 (329)
T ss_dssp STTTCEEEECCCCSCCCCCEEEEEETTEECC--CSSSSEEE-------ETTEEEECSCCGGGCEEEEEEEEECCTTSSSC
T ss_pred eCCCcEEEEeccCCCCCCceEEEEECCccCC--CCCceEec-------CCCEEEEeecChhhCEEEEEEEEecccCCCce
Confidence 3466788899888999 99999999985421 11223332 1588999999999999999999864 1 0
Q ss_pred -------------CC-------C----CCCCCcEEEEEEeEE-------------ecC----------------------
Q psy534 83 -------------SP-------N----SHKNGTWFHLDVHGV-------------FND---------------------- 103 (145)
Q Consensus 83 -------------~~-------~----~~~~g~~~~l~c~~~-------------~~~---------------------- 103 (145)
++ . ....|+.+.|.|... ..+
T Consensus 212 ~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~ 291 (329)
T 3oq3_B 212 IVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGIT 291 (329)
T ss_dssp EEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEE
T ss_pred eEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCcee
Confidence 11 0 123588999999821 000
Q ss_pred CcEEEEcccCCCCCe-eeEEEEecCCC
Q psy534 104 GTELRISNIRSQDIG-DYTCLATHVLY 129 (145)
Q Consensus 104 ~~~L~i~~v~~~d~G-~Y~C~a~n~~g 129 (145)
...|.|.+++.+|+| .|+|.|.|..|
T Consensus 292 ~~~L~I~~v~~~D~G~~Y~C~a~N~~G 318 (329)
T 3oq3_B 292 EATLYFENVTEEYIGNTYTCRGHNYYF 318 (329)
T ss_dssp EEEEEESSCCGGGTTCEEEEEEECSSC
T ss_pred EeEEEEEeccHHHCCCcEEEEEEecCC
Confidence 135999999999999 99999999999
No 124
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.40 E-value=3e-12 Score=91.05 Aligned_cols=113 Identities=9% Similarity=0.092 Sum_probs=77.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|...+. .+.+.|||++.... ... .+. .....+.+|.|.+++.+|+|.|+|.+.+..
T Consensus 18 v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~-~~~-~~~-----~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S 89 (242)
T 1p6f_A 18 VPKEKQVTICCQGNYG-AVEYQLHFEGSLFA-VDR-PKP-----PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPS 89 (242)
T ss_dssp EETTCCEEEEEECCTT-CCEEEEEETTEEEE-EEC-CSS-----CTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCC
T ss_pred cCCCCcEEEEEeeCCC-CcEEEEEECCCccc-ccc-ccc-----cCCcceeEEEecCCCcccCeEEEEEEecCCccccCC
Confidence 3456778888988753 56799999874321 000 000 012347889999999999999999995421
Q ss_pred ------C-----CC------C-CCCCCcEEEEEEeE--------Ee-------------cCCcEEEEcccCCCCCeeeEE
Q psy534 82 ------R-----SP------N-SHKNGTWFHLDVHG--------VF-------------NDGTELRISNIRSQDIGDYTC 122 (145)
Q Consensus 82 ------~-----~~------~-~~~~g~~~~l~c~~--------~~-------------~~~~~L~i~~v~~~d~G~Y~C 122 (145)
+ .| . ....|+.++|.|.. .. .....|.|.+++.+|+|.|+|
T Consensus 90 ~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C 169 (242)
T 1p6f_A 90 NLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRC 169 (242)
T ss_dssp CCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCSEEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEE
T ss_pred cceEEEeecccCCCceEccCCCccCCCCcEEEEEecCCCCCEEEEEECCCccCccccCCCceEEEEeCCCccccCEEEEE
Confidence 0 01 1 12359999999981 11 123479999999999999999
Q ss_pred EEecCC
Q psy534 123 LATHVL 128 (145)
Q Consensus 123 ~a~n~~ 128 (145)
.|.|..
T Consensus 170 ~a~n~~ 175 (242)
T 1p6f_A 170 FGSYNN 175 (242)
T ss_dssp EEEEET
T ss_pred EEECCC
Confidence 999863
No 125
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.40 E-value=3.4e-13 Score=93.35 Aligned_cols=105 Identities=17% Similarity=0.175 Sum_probs=75.9
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------- 81 (145)
..+.++.+.|-+ |.+.+.|+|++... ... . ..+.+|.|.+++.+|+|.|+|.+.+..
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k~g~~l-~~~------~------~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~ 79 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFKDGKMI-GFL------T------EDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVY 79 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEETTEEE-EEE------E------SSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEE
T ss_pred cCCCeEEEEEcC---CCCEEEEEECCEEC-CCC------C------CCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEE
Confidence 456788888877 78999999987431 100 0 136789999999999999999862210
Q ss_pred -C--------------------------------------CCCCCC-CCcEEEEEEeE-------------Ee-------
Q psy534 82 -R--------------------------------------SPNSHK-NGTWFHLDVHG-------------VF------- 101 (145)
Q Consensus 82 -~--------------------------------------~~~~~~-~g~~~~l~c~~-------------~~------- 101 (145)
. .+.... .|..+.|.|.+ ..
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~g~p~p~i~W~k~~~~l~~~~~~~ 159 (204)
T 1sy6_A 80 YRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDK 159 (204)
T ss_dssp EEC------------------------------------CCCCEEEEETTEEEEECSCCCSSCEEEEETTEEESCCTTCT
T ss_pred EEEeccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcCCCCCCceEEEECCEECCCccCCc
Confidence 0 001112 68999999972 00
Q ss_pred ---cCCcEEEEccc-CCCCCeeeEEEEecCCC
Q psy534 102 ---NDGTELRISNI-RSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ---~~~~~L~i~~v-~~~d~G~Y~C~a~n~~g 129 (145)
..+..|.|.++ +.+|+|.|+|.|.|..|
T Consensus 160 ~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g 191 (204)
T 1sy6_A 160 NIGSDEDHLSLKEFSELEQSGYYVCYPRGSKP 191 (204)
T ss_dssp TEEEETTEEEETTCCHHHHCEEEEEEETTSCG
T ss_pred eEecCCCEEEEeeCCccccCEEEEEEeccCCC
Confidence 02347999999 99999999999999998
No 126
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.40 E-value=5.7e-13 Score=91.82 Aligned_cols=119 Identities=18% Similarity=0.099 Sum_probs=80.6
Q ss_pred hhhccceeeEEeecCCC---ccEEEEecCCC-Ccc----------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 8 KSIFQMLSVGDFADDED---IPVYIWYDSYP-THE----------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p---~p~~~w~k~~~-~~~----------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
...+..+.+-|.+.|.| .+.+.||++.. ... ...+.+|+.+.. ..+..+|.|.+++.+|+|.|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y 88 (212)
T 1q0x_L 12 TSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL---IGDKAALTITGAQTEDEAIY 88 (212)
T ss_dssp ECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEEE
T ss_pred ecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe---eCCEEEEEECCCCccCCEEE
Confidence 45677888999998877 47899998642 111 123456665432 13467999999999999999
Q ss_pred EEEEEEec-----------C------CCCC--------CCCCcEEEEEEeE-----------EecC--------------
Q psy534 74 ECKVVFLN-----------R------SPNS--------HKNGTWFHLDVHG-----------VFND-------------- 103 (145)
Q Consensus 74 ~C~~~~~~-----------~------~~~~--------~~~g~~~~l~c~~-----------~~~~-------------- 103 (145)
.|.+.+.. + +|.. ...|..+.|.|.. +..+
T Consensus 89 ~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~ 168 (212)
T 1q0x_L 89 FCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPS 168 (212)
T ss_dssp EEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCE
T ss_pred EEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCce
Confidence 99996431 0 1100 1147899999971 0000
Q ss_pred ----C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 ----G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 ----~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|..+..+|+|.|+|.|.|...
T Consensus 169 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (212)
T 1q0x_L 169 KQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGH 203 (212)
T ss_dssp ECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTE
T ss_pred eCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCc
Confidence 1 1477888888999999999999854
No 127
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.39 E-value=5.1e-12 Score=100.18 Aligned_cols=111 Identities=22% Similarity=0.324 Sum_probs=82.3
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-------
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------- 82 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------- 82 (145)
.+.++.+.|-+.| |.+.+.|++++... . ...|+.+. ..+.+|.|.+++.+|+|.|+|.+.+...
T Consensus 125 ~g~~v~l~C~~~~-p~~~v~W~~~g~~l-~--~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~ 195 (642)
T 1e07_A 125 DKDAVAFTCEPET-QDATYLWWVNNQSL-P--VSPRLQLS-----NGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSV 195 (642)
T ss_pred cCCcEEEEEECCC-CCeeEEEEECCeEC-C--CCCceEEc-----CCCCEEEEeCCCcccCeeEEEEEecCCCCcccceE
Confidence 3556778888888 89999999987542 2 23455542 2367899999999999999999965321
Q ss_pred ------CC---------CCCCCCcEEEEEEeE---------E------ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 ------SP---------NSHKNGTWFHLDVHG---------V------FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 ------~~---------~~~~~g~~~~l~c~~---------~------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.| .....|+.+.|.|.. + ......|.|.+++.+|+|.|+|.|.|..|
T Consensus 196 ~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 272 (642)
T 1e07_A 196 ILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDT 272 (642)
T ss_pred EEEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcccCCceEEecccccCCeEEEEEEEeCCC
Confidence 11 113459999999982 1 12334799999999999999999999887
No 128
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.39 E-value=1.3e-12 Score=93.95 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=78.0
Q ss_pred hccceeeEEeecCCCc-cEEEEe-cCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCE-EEEEEEEEec-----
Q psy534 10 IFQMLSVGDFADDEDI-PVYIWY-DSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQG-WYECKVVFLN----- 81 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~-p~~~w~-k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G-~Y~C~~~~~~----- 81 (145)
.+.++.+.|-+.| |. +.+.|+ +++.. +.. ..++... .+..|.|.+++.+|+| .|.|.+.+..
T Consensus 105 ~g~~v~l~C~~~~-p~~~~v~W~~~~g~~-l~~--~~~~~~~------~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s 174 (290)
T 2o26_X 105 EDSDALVRCPLTD-PQVSQYSLIECDGKS-LPT--DLTFVPN------PKAGITIKNVKRAYHRLCVRCAAQRDGTWLHS 174 (290)
T ss_dssp TTSCEEECCCBSC-CSCEEEEEEETTSCC-CCT--TCEEEEE------TTTEEEEESCCGGGTTCEEEEEEEETTEEEEC
T ss_pred cCCeEEEeCcCCC-CCCceEEEEeCCCcC-CCC--CCceeeC------CCCCEEEecccHHHCCCEEEEEEEECCceEEe
Confidence 4566777888876 77 999995 55533 221 2344442 2568999999999999 9999996521
Q ss_pred ------------CCC--------CCCCCCcEEEEEEeEE----------e------------------------cCCcEE
Q psy534 82 ------------RSP--------NSHKNGTWFHLDVHGV----------F------------------------NDGTEL 107 (145)
Q Consensus 82 ------------~~~--------~~~~~g~~~~l~c~~~----------~------------------------~~~~~L 107 (145)
.+| .....|+.+.|.|... . .....|
T Consensus 175 ~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 254 (290)
T 2o26_X 175 DKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETL 254 (290)
T ss_dssp CCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEE
T ss_pred EEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEE
Confidence 011 1134589999999810 0 012369
Q ss_pred EEcccCCCCCeeeEEEEecCCC
Q psy534 108 RISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 108 ~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|.+++.+|+|.|+|.|.|..|
T Consensus 255 ~I~~v~~~d~G~Y~C~a~N~~g 276 (290)
T 2o26_X 255 TISSARVDDSGVFMCYANNTFG 276 (290)
T ss_dssp EESSCCSSSCEEEEEEEECSSC
T ss_pred EEcCCCcccCeEEEEEEeCCCC
Confidence 9999999999999999999999
No 129
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.39 E-value=3.8e-13 Score=94.91 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=71.7
Q ss_pred hhccceeeEEeecCCCccE-----EEEecCCCCcc------------cccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 9 SIFQMLSVGDFADDEDIPV-----YIWYDSYPTHE------------AEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~-----~~w~k~~~~~~------------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
..+.++.+.|-+.|.|.+. +.|+++..... ...+.+|..+.......++.+|.|.+++.+|+|
T Consensus 16 ~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~G 95 (248)
T 3pv7_A 16 PLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAG 95 (248)
T ss_dssp ETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGGCE
T ss_pred eCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHHCe
Confidence 4567788888888777665 99998743211 011222222211112245778999999999999
Q ss_pred EEEEEEEEec----------C--CC-------CCCCCCcEEEEEEeE-----------EecC------------------
Q psy534 72 WYECKVVFLN----------R--SP-------NSHKNGTWFHLDVHG-----------VFND------------------ 103 (145)
Q Consensus 72 ~Y~C~~~~~~----------~--~~-------~~~~~g~~~~l~c~~-----------~~~~------------------ 103 (145)
.|+|.+.+.. + +| .....+..+.|.|.. +..+
T Consensus 96 ~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~ 175 (248)
T 3pv7_A 96 EYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGP 175 (248)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEE
T ss_pred EEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecc
Confidence 9999995422 0 11 112346677788971 0000
Q ss_pred ------C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 ------G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 ------~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|.....+|.|.|+|.|+|..+
T Consensus 176 ~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~ 212 (248)
T 3pv7_A 176 TIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASL 212 (248)
T ss_dssp EEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTC
T ss_pred cEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCC
Confidence 1 2466777788899999999999887
No 130
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.39 E-value=3.4e-12 Score=90.01 Aligned_cols=117 Identities=17% Similarity=0.219 Sum_probs=80.8
Q ss_pred hhhccceeeEEeecCCC-----ccEEEEecCCC-Ccc----------cccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 8 KSIFQMLSVGDFADDED-----IPVYIWYDSYP-THE----------AEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p-----~p~~~w~k~~~-~~~----------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
...+..+.+-|-+.+.| .+.+.||++.. ... ...+.+|+.+.. .....+|.|.+++.+|+|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G 89 (247)
T 1svz_A 13 VSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSG---SGTDFTLKISRVEAEDLG 89 (247)
T ss_dssp ECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCE
T ss_pred ecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEecc---CCCEEEEEECCCCHHHCE
Confidence 45677889999999887 68899998531 100 012345666532 134678999999999999
Q ss_pred EEEEEEEEec-----------C--C------------CC---------CCCCCcEEEEEEeEE-----------ec----
Q psy534 72 WYECKVVFLN-----------R--S------------PN---------SHKNGTWFHLDVHGV-----------FN---- 102 (145)
Q Consensus 72 ~Y~C~~~~~~-----------~--~------------~~---------~~~~g~~~~l~c~~~-----------~~---- 102 (145)
.|+|.+.+.. + + +. ....|+.+.|.|... +.
T Consensus 90 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~ 169 (247)
T 1svz_A 90 IYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPG 169 (247)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTT
T ss_pred EEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCC
Confidence 9999985421 0 1 10 123588999999810 00
Q ss_pred ----------------------C------------CcEEEEcccCCCCCeeeEEEEecC
Q psy534 103 ----------------------D------------GTELRISNIRSQDIGDYTCLATHV 127 (145)
Q Consensus 103 ----------------------~------------~~~L~i~~v~~~d~G~Y~C~a~n~ 127 (145)
. ...|.|.+++.+|+|.|+|.|.|.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 170 GDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp CCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 0 026899999999999999999995
No 131
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=1.6e-13 Score=101.75 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=83.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCE-EEEEEEEEecC----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQG-WYECKVVFLNR---- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G-~Y~C~~~~~~~---- 82 (145)
...+.++.+.|-+.|.|.|.+.|++++....... .+. .....++|.|.+++.+|+| .|.|.+.+...
T Consensus 170 v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~--~~~------~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~ 241 (347)
T 2ifg_A 170 VDVGDDVLLRCQVEGRGLEQAGWILTELEQSATV--MKS------GGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEV 241 (347)
T ss_dssp CBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEE--CCC------CCSSEEEEEEESCCSTTTTCCEEECCEETTEECCE
T ss_pred EeCCCcEEEEEEEecCCCCEEEEEcCCceeeccc--ccc------eecccceEEEeeCChHHCCCeEEEEEEcCCCCEEE
Confidence 3456778888999999999999999875422111 111 1245889999999999999 99999965421
Q ss_pred --------CCC----CCCCCcEEEEEEeE---------Ee------c----------C--------CcEEEEcccCCCCC
Q psy534 83 --------SPN----SHKNGTWFHLDVHG---------VF------N----------D--------GTELRISNIRSQDI 117 (145)
Q Consensus 83 --------~~~----~~~~g~~~~l~c~~---------~~------~----------~--------~~~L~i~~v~~~d~ 117 (145)
+|. ....|..+.|.|.. +. . . ...|.|.+++.+|+
T Consensus 242 ~~~l~V~~~P~i~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~ 321 (347)
T 2ifg_A 242 SVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNN 321 (347)
T ss_dssp EECCCCBEEEEEEECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGC
T ss_pred EEEEEEcCCCeeeeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccC
Confidence 111 12348889999981 00 0 0 22499999999999
Q ss_pred eeeEEEEecCCC
Q psy534 118 GDYTCLATHVLY 129 (145)
Q Consensus 118 G~Y~C~a~n~~g 129 (145)
|.|+|.|.|..|
T Consensus 322 G~Y~C~a~N~~G 333 (347)
T 2ifg_A 322 GNYTLLAANPFG 333 (347)
T ss_dssp EEEEEEEEETTE
T ss_pred ceEEEEEecCCC
Confidence 999999999998
No 132
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.38 E-value=2e-13 Score=101.69 Aligned_cols=113 Identities=18% Similarity=0.228 Sum_probs=82.7
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCC-CCCEEEEEEEEEecC-----
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRE-SDQGWYECKVVFLNR----- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~-~D~G~Y~C~~~~~~~----- 82 (145)
..+.++.+.|-+.|.|.+.+.|++++.. +......|..+. +++|.|.++.. +|+|.|+|.+.+...
T Consensus 20 ~~g~~v~l~C~~~g~p~~~v~W~k~g~~-~~~~~~~~~~~~-------~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~ 91 (382)
T 1cs6_A 20 SAEEKVTLTCRARANPPATYRWKMNGTE-LKMGPDSRYRLV-------AGDLVISNPVKAKDAGSYQCVATNARGTVVSR 91 (382)
T ss_dssp CSCCEEEECCEEEEESCCEEEEEETTEE-CCCSTTSSEEEE-------TTEEEEESCCHHHHCEEEEEEEEETTEEEECC
T ss_pred CCCCcEEEEEEecCCCCCEEEEEECCEE-CCcCCCccEEee-------CCeEEEecccccccCEEEEEEEEcCCcEEEec
Confidence 4567888889998999999999998753 332334455542 56899999997 999999999965320
Q ss_pred ---------CC---C-----CCCCCcEEEEEEeE----------Ee-----------------cCCcEEEEcccCCCCCe
Q psy534 83 ---------SP---N-----SHKNGTWFHLDVHG----------VF-----------------NDGTELRISNIRSQDIG 118 (145)
Q Consensus 83 ---------~~---~-----~~~~g~~~~l~c~~----------~~-----------------~~~~~L~i~~v~~~d~G 118 (145)
+. . ....|+.+.|.|.. +. .....|.|.+++.+|+|
T Consensus 92 ~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 171 (382)
T 1cs6_A 92 EASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLG 171 (382)
T ss_dssp CEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCE
T ss_pred ceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCe
Confidence 00 0 12358899999971 00 12247999999999999
Q ss_pred eeEEEEecCCC
Q psy534 119 DYTCLATHVLY 129 (145)
Q Consensus 119 ~Y~C~a~n~~g 129 (145)
.|+|.|.|..|
T Consensus 172 ~Y~C~~~n~~g 182 (382)
T 1cs6_A 172 NYSCFATSHID 182 (382)
T ss_dssp EEEEEEEEEET
T ss_pred eEEEEEEEccc
Confidence 99999999874
No 133
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.38 E-value=1.9e-13 Score=92.36 Aligned_cols=116 Identities=11% Similarity=0.119 Sum_probs=70.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCc---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTH---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+.++.+-|.+. .|.+.+.|++++... ....|++|+.+. ..+++|.|.+++.+|+|.|.|.+.+
T Consensus 8 ~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~-----~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 8 VVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLD-----TVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp ETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEEC-----TTTCCEEECSCCGGGCEEEEEECTT
T ss_pred EcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEe-----CCCCeEEECCCChhhCceEEEEEeC
Confidence 3455666666663 377788888775321 123467787763 3478999999999999999999843
Q ss_pred ec--------C--C-CCCC--CCCcEEEEEEeE---------EecCCcE------EEEcccCCCCCeeeEEEEecCCCC
Q psy534 80 LN--------R--S-PNSH--KNGTWFHLDVHG---------VFNDGTE------LRISNIRSQDIGDYTCLATHVLYP 130 (145)
Q Consensus 80 ~~--------~--~-~~~~--~~g~~~~l~c~~---------~~~~~~~------L~i~~v~~~d~G~Y~C~a~n~~g~ 130 (145)
.. + + +.+. .......|.|.. +..++.. +.|.....+|+|.|+|.|.|.+|.
T Consensus 82 ~~~~~~~~L~V~~~~~~p~i~~~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~~~~~~~g~Y~C~a~N~~~~ 160 (171)
T 1ccz_A 82 ITDTMKFFLYVLEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRVSQ 160 (171)
T ss_dssp CCSCEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEEEEEEETTEE
T ss_pred CCCcEEEEEEEECcCCCCEEEEecCCcEEEEEeCCCCCcEEEEEECCEECcCCcceEEEEeccCCCceEEEEEEcccCc
Confidence 21 1 1 1110 011113688971 1222211 122223367899999999999983
No 134
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.38 E-value=1.2e-12 Score=90.85 Aligned_cols=122 Identities=16% Similarity=0.185 Sum_probs=81.8
Q ss_pred hhhccceeeEEeecC-CCc----cEEEEecCCCCc-c-------cccc--cceEEEecCCC--CCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADD-EDI----PVYIWYDSYPTH-E-------AEEY--KGRISRVDKES--PFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g-~p~----p~~~w~k~~~~~-~-------~~~~--~~R~~~~~~~~--~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+.|-+.+ .+. ..+.|++++... + ...+ .+|+.+..+.. ..++++|.|.+++.+|+
T Consensus 11 ~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~ 90 (221)
T 3eow_R 11 GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDE 90 (221)
T ss_dssp CCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCC
T ss_pred EEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHC
Confidence 345677888888853 332 358999985321 0 0111 56777765322 23588999999999999
Q ss_pred EEEEEEEEEec-C------------CC-------CCCCCCcEE-EEEEeE----------Eec---------------CC
Q psy534 71 GWYECKVVFLN-R------------SP-------NSHKNGTWF-HLDVHG----------VFN---------------DG 104 (145)
Q Consensus 71 G~Y~C~~~~~~-~------------~~-------~~~~~g~~~-~l~c~~----------~~~---------------~~ 104 (145)
|.|+|.+.+.. . +| .....|..+ .|.|.. ++. .+
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~ 170 (221)
T 3eow_R 91 GSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSG 170 (221)
T ss_dssp SCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBT
T ss_pred eEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCC
Confidence 99999997632 0 11 111346677 599981 110 11
Q ss_pred -----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 -----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 -----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.++..+|.|.|+|.|.|..+
T Consensus 171 ~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~ 200 (221)
T 3eow_R 171 TVTVTSLWILVPSSQVDGKQVTCKVEHESF 200 (221)
T ss_dssp TBCCEEEEECCCCSCCCCCCEEEEECCSCS
T ss_pred cEEEEEEEEEeCCHHHCCCeEEEEEECCCC
Confidence 3588899999999999999999987
No 135
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.38 E-value=3.2e-12 Score=99.07 Aligned_cols=120 Identities=17% Similarity=0.146 Sum_probs=84.5
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC-Ccc----------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP-THE----------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~~~----------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
....+.++.+.|-+.|.|.+.+.|||++. ... ...+.+|+.... .....+|.|.+++.+|+|.|+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C 87 (523)
T 2rcj_C 11 SGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSK---SGTSASLAISGLEAEDESDYYC 87 (523)
T ss_pred EEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEec---CCCEEEEEECCCChhhCEEEEE
Confidence 34567788899999999999999998751 111 122346666421 2346789999999999999999
Q ss_pred EEEEec-------------C------CCC--------CCCCCcEEEEEEeE-----------EecC--------------
Q psy534 76 KVVFLN-------------R------SPN--------SHKNGTWFHLDVHG-----------VFND-------------- 103 (145)
Q Consensus 76 ~~~~~~-------------~------~~~--------~~~~g~~~~l~c~~-----------~~~~-------------- 103 (145)
.+.+.. + +|. ....|+.+.|.|.. +..+
T Consensus 88 ~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~ 167 (523)
T 2rcj_C 88 ASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPS 167 (523)
T ss_pred EEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEecccc
Confidence 997531 0 110 11247889999971 0000
Q ss_pred ----C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 ----G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 ----~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|.+++.+|+|.|+|.|.|..|
T Consensus 168 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 202 (523)
T 2rcj_C 168 KQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 202 (523)
T ss_pred ccCCCCEEEEEEEEEechhcCCCceEEEEEEecCc
Confidence 1 1488999999999999999999877
No 136
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.38 E-value=4e-12 Score=92.71 Aligned_cols=113 Identities=12% Similarity=0.171 Sum_probs=70.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
..+.++.+.|.+.+ +.+.+.|++++..........+... ......|.|.+++.+|+|.|+|.+.+...
T Consensus 131 ~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~-----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~ 204 (316)
T 3vh8_G 131 KSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHD-----GVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSA 204 (316)
T ss_dssp ETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEET-----TEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCC
T ss_pred CCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecC-----CCceEEEEECCCChhhCceEEEEEecCCCCccccC
Confidence 34667788898854 4567889998754221111111110 12378899999999999999999975310
Q ss_pred --------------CC-------CCCCCCcEEEEEEeE--------E---------------ecCC---cEEEEcccCCC
Q psy534 83 --------------SP-------NSHKNGTWFHLDVHG--------V---------------FNDG---TELRISNIRSQ 115 (145)
Q Consensus 83 --------------~~-------~~~~~g~~~~l~c~~--------~---------------~~~~---~~L~i~~v~~~ 115 (145)
++ .....|+.+.|.|.. . ...+ ..|.|.+++
T Consensus 205 ~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~-- 282 (316)
T 3vh8_G 205 PSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT-- 282 (316)
T ss_dssp CCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESSCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-----
T ss_pred CCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCCCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--
Confidence 00 123459999999981 0 0111 368899998
Q ss_pred CCeeeEEEEecCCC
Q psy534 116 DIGDYTCLATHVLY 129 (145)
Q Consensus 116 d~G~Y~C~a~n~~g 129 (145)
|+|.|+|.|.|..+
T Consensus 283 D~G~Y~C~a~n~~~ 296 (316)
T 3vh8_G 283 HGGTYRCFGSFRHS 296 (316)
T ss_dssp --CEEEEEEEBTTB
T ss_pred CCEEEEEEeecCCC
Confidence 99999999999654
No 137
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.37 E-value=1.6e-12 Score=89.45 Aligned_cols=119 Identities=18% Similarity=0.212 Sum_probs=79.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC---Cc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+-|.+.+.|.+.+.|||... .. ....+.+|+.+.. ..++.+|.|.+++.+|+|.|.|.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3r06_A 13 ASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSG---SGRDSSFTISSLESEDIGSYYCQ 89 (213)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCSEEEEE
T ss_pred ecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEec---cCCEEEEEECCCCcccCEEEEEe
Confidence 4567888999999999999999998431 10 0112345665532 23578999999999999999999
Q ss_pred EEEec-----------C-----CCCC--------CCCCcEEEEEEeE-----------EecC------------------
Q psy534 77 VVFLN-----------R-----SPNS--------HKNGTWFHLDVHG-----------VFND------------------ 103 (145)
Q Consensus 77 ~~~~~-----------~-----~~~~--------~~~g~~~~l~c~~-----------~~~~------------------ 103 (145)
+.+.. + +|.. ...|..+.|.|.. +..+
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~ 169 (213)
T 3r06_A 90 QYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSK 169 (213)
T ss_dssp ECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTT
T ss_pred cccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCC
Confidence 95421 0 1100 1136789999971 0001
Q ss_pred -C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 -G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 -~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|.....+|+|.|+|.|+|...
T Consensus 170 ~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 170 DSTYSLSSTLSLTKADYERHNLYTCEVTHKTS 201 (213)
T ss_dssp TCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred CCcEEEEEEEEeCHHHhccCCeEEEEEEeccc
Confidence 1 1456677777789999999999864
No 138
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.37 E-value=2.7e-13 Score=93.43 Aligned_cols=119 Identities=14% Similarity=0.131 Sum_probs=81.1
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC-Ccc----------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP-THE----------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~~~----------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+.|.+.+.|.+.+.||++.. ... ...+.+|+.+.. .....+|.|.+++.+|+|.|.|.
T Consensus 11 v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 87 (212)
T 1nfd_E 11 VTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST---SGTTATLTISGAQPEDEAAYYCL 87 (212)
T ss_dssp EETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE---ETTEEEEEETTCCGGGCSEEEEE
T ss_pred EeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe---eCCEEEEEECcCCcccCEEEEEE
Confidence 4567788889998888888899998531 111 122356666532 13467999999999999999999
Q ss_pred EEEe-------c------C------CCCC--------CCCCcEEEEEEeEE-----------ecCC--------------
Q psy534 77 VVFL-------N------R------SPNS--------HKNGTWFHLDVHGV-----------FNDG-------------- 104 (145)
Q Consensus 77 ~~~~-------~------~------~~~~--------~~~g~~~~l~c~~~-----------~~~~-------------- 104 (145)
+.+. . + +|.. ...|..+.|.|... +.++
T Consensus 88 ~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 167 (212)
T 1nfd_E 88 SSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSK 167 (212)
T ss_dssp EEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBC
T ss_pred EEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCcee
Confidence 9841 0 0 1100 11377899999711 0011
Q ss_pred --------cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 --------TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 --------~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.+++.+|+|.|+|.|.|..+
T Consensus 168 ~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (212)
T 1nfd_E 168 QGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGE 200 (212)
T ss_dssp SSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTT
T ss_pred cCCCceEEEEEEEchhhcCCCCeEEEEEEeCCc
Confidence 1277888999999999999999876
No 139
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.37 E-value=6.5e-12 Score=102.05 Aligned_cols=120 Identities=19% Similarity=0.222 Sum_probs=82.1
Q ss_pred hhccceeeEEeecCCCc-cEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 9 SIFQMLSVGDFADDEDI-PVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~-p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
..+.++.+.|-+.+.+. +.+.|++++... ........... ......|.|.+++.+|+|.|+|.+.+...
T Consensus 632 ~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l-~~~~~~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 706 (816)
T 3dmk_A 632 QVGQYLTLHCSVPGGDLPLNIDWTLDGQAI-SEDLGITTSRV----GRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFT 706 (816)
T ss_dssp ESSCEEEEEEBCCCSSSCCEEEEEETTBCC-CGGGTCEEEEE----TTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CCCCeEEEEEEEeCCCCCCEEEEEECCeEc-CCCCCeeEEEc----CCCeeEEEEccCChhhCEEEEEEEEeCCccEEEE
Confidence 45667788898876554 489999998542 21111111111 13467899999999999999999965321
Q ss_pred -------C------CC--CCCCCcEEEEEEeEE---------e--------------------cCCcEEEEcccCCCCCe
Q psy534 83 -------S------PN--SHKNGTWFHLDVHGV---------F--------------------NDGTELRISNIRSQDIG 118 (145)
Q Consensus 83 -------~------~~--~~~~g~~~~l~c~~~---------~--------------------~~~~~L~i~~v~~~d~G 118 (145)
+ +. ....|..+.|.|... . .....|.|.+++.+|+|
T Consensus 707 ~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 786 (816)
T 3dmk_A 707 TPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEG 786 (816)
T ss_dssp EEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCE
T ss_pred EEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCe
Confidence 1 11 123589999999810 0 01237999999999999
Q ss_pred eeEEEEecCCCCcEE
Q psy534 119 DYTCLATHVLYPDLL 133 (145)
Q Consensus 119 ~Y~C~a~n~~g~~~~ 133 (145)
.|+|.|.|.+|....
T Consensus 787 ~Y~C~a~N~~G~~~~ 801 (816)
T 3dmk_A 787 YYLCEAINGIGSGLS 801 (816)
T ss_dssp EEEEEEECSSSSCEE
T ss_pred EEEEEEEeCCCCCcE
Confidence 999999999994333
No 140
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.37 E-value=6.7e-12 Score=87.44 Aligned_cols=121 Identities=14% Similarity=0.132 Sum_probs=83.0
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC-C--c-------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP-T--H-------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~--~-------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+.+ .+.+.||+... . . ....+.+|+.+..+ ...++.+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~D 90 (220)
T 2fbj_H 12 VQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRD-NAKNSLYLQMSKVRSED 90 (220)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEC-SSSCEEEEEECSCCGGG
T ss_pred ecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEee-CCCCEEEEEECCCChhh
Confidence 45677888889888765 57789987531 1 0 11235678887543 23457899999999999
Q ss_pred CEEEEEEEEEec-------------C------CC-------CCCCCCcEEEEEEeEE------------e----------
Q psy534 70 QGWYECKVVFLN-------------R------SP-------NSHKNGTWFHLDVHGV------------F---------- 101 (145)
Q Consensus 70 ~G~Y~C~~~~~~-------------~------~~-------~~~~~g~~~~l~c~~~------------~---------- 101 (145)
+|.|+|.+.+.. + +| .....|..+.|.|... .
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~ 170 (220)
T 2fbj_H 91 TALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVN 170 (220)
T ss_dssp CEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEE
T ss_pred CEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEe
Confidence 999999986420 0 01 0123588899999710 0
Q ss_pred ------cCC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 ------NDG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ------~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.++ ..|.|.....+|.|.|+|.|.|..+
T Consensus 171 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~ 209 (220)
T 2fbj_H 171 FPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSN 209 (220)
T ss_dssp CCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTS
T ss_pred cCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 011 1377878888899999999999988
No 141
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.37 E-value=5.4e-12 Score=92.32 Aligned_cols=122 Identities=13% Similarity=0.139 Sum_probs=80.1
Q ss_pred hhhccceeeEEeecCC-CccEEEEecCCCCcc------cccccceEEEecCCC--CCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDE-DIPVYIWYDSYPTHE------AEEYKGRISRVDKES--PFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~-p~p~~~w~k~~~~~~------~~~~~~R~~~~~~~~--~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
...+.++.+.|-+.|. |.+.+.|||++.... ......|+....+.. .....+|.|.+++.+|+|.|+|.+.
T Consensus 15 v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 94 (327)
T 2wng_A 15 VAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKF 94 (327)
T ss_dssp EETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEE
T ss_pred EecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEee
Confidence 3456788888999887 889999999875311 011123555433211 1347789999999999999999996
Q ss_pred Eec---------------C--CC---------CCCCCCcEEEEEEeE-----------EecC-----------------C
Q psy534 79 FLN---------------R--SP---------NSHKNGTWFHLDVHG-----------VFND-----------------G 104 (145)
Q Consensus 79 ~~~---------------~--~~---------~~~~~g~~~~l~c~~-----------~~~~-----------------~ 104 (145)
+.. + .+ .....|+.+.|.|.. +..+ +
T Consensus 95 n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~ 174 (327)
T 2wng_A 95 RKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESV 174 (327)
T ss_dssp ESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCS
T ss_pred cCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCC
Confidence 531 0 11 113459999999981 0000 1
Q ss_pred -----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 -----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 -----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.....+|.|.|+|.|.|..+
T Consensus 175 ~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~ 204 (327)
T 2wng_A 175 SYSIHSTAKVVLTREDVHSQVICEVAHVTL 204 (327)
T ss_dssp CEEEEEEEEEECCTTGGGCEEEEEEECTTS
T ss_pred ceEEEEEEEEechhcCcCceEEEEEecccc
Confidence 1355555556668999999999876
No 142
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.37 E-value=2.1e-12 Score=96.14 Aligned_cols=114 Identities=15% Similarity=0.196 Sum_probs=81.5
Q ss_pred hccceeeEEeecCCC---ccEEEEecCCCCccc--ccccceEEEecCCCCCCeeeEEEcccCCCCC-EEEEEEEEEecC-
Q psy534 10 IFQMLSVGDFADDED---IPVYIWYDSYPTHEA--EEYKGRISRVDKESPFGMASLNLTKIRESDQ-GWYECKVVFLNR- 82 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p---~p~~~w~k~~~~~~~--~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~-G~Y~C~~~~~~~- 82 (145)
.+.++.+.|-+.+.+ .+.+.|++++..... ..+.+|..+. .+++|.|.+++.+|+ |.|+|.+.+...
T Consensus 117 ~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~------~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~ 190 (388)
T 2v5m_A 117 RGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVL------PSGELHIREVGPEDGYKSYQCRTKHRLTG 190 (388)
T ss_dssp TTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEEC------TTSCEEESSCCGGGGGCCEEEEEEETTTC
T ss_pred cCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEc------cCCcEEEecCCccccCeeEEEEeccCCCC
Confidence 455677778777653 488999999764322 2345666652 367899999999999 999999965310
Q ss_pred ---------------C--------CC------CCCCCcEEEEEEeE---------Ee-------------------cCCc
Q psy534 83 ---------------S--------PN------SHKNGTWFHLDVHG---------VF-------------------NDGT 105 (145)
Q Consensus 83 ---------------~--------~~------~~~~g~~~~l~c~~---------~~-------------------~~~~ 105 (145)
+ +. ....|+.+.|.|.. +. ..+.
T Consensus 191 ~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 270 (388)
T 2v5m_A 191 ETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSG 270 (388)
T ss_dssp CEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETT
T ss_pred ceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccC
Confidence 1 00 01238889999981 10 0124
Q ss_pred EEEEcccCCCCCeeeEEEEecCCC
Q psy534 106 ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 106 ~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|.|.+++.+|+|.|+|.|.|..|
T Consensus 271 ~L~i~~v~~~d~G~Y~C~a~n~~g 294 (388)
T 2v5m_A 271 TLIIKDAVVEDSGKYLCVVNNSVG 294 (388)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSC
T ss_pred EEEECcCCHHHCeEEEEEEecCCC
Confidence 799999999999999999999998
No 143
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.37 E-value=1e-12 Score=90.48 Aligned_cols=115 Identities=15% Similarity=0.200 Sum_probs=79.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCC---CCc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSY---PTH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~---~~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+.|.+.+.|.+.+.|||+. ... ....+.+|+.+.. ..++.+|.|.+++.+|+|.|+|.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3nl4_L 13 EPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSG---SGTDFTLTISDLECADAATYYCQ 89 (213)
T ss_dssp EETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEECSCCGGGCEEEEEE
T ss_pred EcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEec---CCCEEEEEECCCChHHCEEEEEe
Confidence 456788899999999999999999853 110 0112345666542 13477999999999999999999
Q ss_pred EEEec-------------C-----CCC--------CCCCCcEEEEEEeEE----------------ec------------
Q psy534 77 VVFLN-------------R-----SPN--------SHKNGTWFHLDVHGV----------------FN------------ 102 (145)
Q Consensus 77 ~~~~~-------------~-----~~~--------~~~~g~~~~l~c~~~----------------~~------------ 102 (145)
+.+.. + +|. ....|..+.|.|... ..
T Consensus 90 ~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~ 169 (213)
T 3nl4_L 90 STYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNS 169 (213)
T ss_dssp ECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCT
T ss_pred cCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccC
Confidence 96421 0 110 012388999999810 00
Q ss_pred -CC-----cEEEEcccCCCCCeeeEEEEe
Q psy534 103 -DG-----TELRISNIRSQDIGDYTCLAT 125 (145)
Q Consensus 103 -~~-----~~L~i~~v~~~d~G~Y~C~a~ 125 (145)
++ ..|.|..+..+|+|.|+|.|.
T Consensus 170 ~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 170 ADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp TTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 01 247789999999999999999
No 144
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.36 E-value=8.9e-13 Score=92.01 Aligned_cols=119 Identities=16% Similarity=0.183 Sum_probs=80.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC---Cc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+.|-+.+.|.+.+.||+... .. ......+|+.... ..++.+|.|.+++.+|+|.|+|.
T Consensus 36 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 112 (237)
T 3sob_L 36 ASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG---SGTDFTLTISSLQPEDFATYYCQ 112 (237)
T ss_dssp EETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEEEEEE
T ss_pred EeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEc---CCCEEEEEECCCChhhCeEEEEe
Confidence 4456788889999988899999998531 10 0112234555431 13578999999999999999999
Q ss_pred EEEec-----------C-----CCCC--------CCCCcEEEEEEeEE-----------e------c-------------
Q psy534 77 VVFLN-----------R-----SPNS--------HKNGTWFHLDVHGV-----------F------N------------- 102 (145)
Q Consensus 77 ~~~~~-----------~-----~~~~--------~~~g~~~~l~c~~~-----------~------~------------- 102 (145)
+.+.. + +|.. ...|..+.|.|... . .
T Consensus 113 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~ 192 (237)
T 3sob_L 113 QSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSK 192 (237)
T ss_dssp ECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTT
T ss_pred eccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccC
Confidence 95421 0 1100 11377899999710 0 0
Q ss_pred CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 ~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
++ ..|.|.....+|+|.|+|.|+|...
T Consensus 193 ~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 224 (237)
T 3sob_L 193 DSTYSLSSTLTLSKADYEKHKVYACEVTHQGL 224 (237)
T ss_dssp TCCEEEEEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred CCcEEEEEEEEEcHHHccCCCcEEEEEeeCCC
Confidence 11 2367888888999999999999875
No 145
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.36 E-value=2.2e-12 Score=94.20 Aligned_cols=119 Identities=16% Similarity=0.260 Sum_probs=80.5
Q ss_pred hhccceeeEEeecCC----CccEEEEecCCC--------------CcccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 9 SIFQMLSVGDFADDE----DIPVYIWYDSYP--------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~----p~p~~~w~k~~~--------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
..+.++.+.|-+.+. +.+.+.|++++. ..+...+.+|+.+.. ....+++|.|.+++.+|+
T Consensus 27 ~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~L~I~~v~~~D~ 104 (331)
T 3u83_A 27 FIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLR--PSFTDGTIRLSRLELEDE 104 (331)
T ss_dssp ETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESS--CSSSBCCEEECSCCGGGC
T ss_pred EecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecc--cCCCCceEEEcccCcccC
Confidence 456677777877765 566799998531 112345678888752 234578999999999999
Q ss_pred EEEEEEEEEec-------------CCC--------C--CCCCC---cEEEEEEe-E---------Ee-------------
Q psy534 71 GWYECKVVFLN-------------RSP--------N--SHKNG---TWFHLDVH-G---------VF------------- 101 (145)
Q Consensus 71 G~Y~C~~~~~~-------------~~~--------~--~~~~g---~~~~l~c~-~---------~~------------- 101 (145)
|.|.|.+.... ..| . ....| +.+.|.|. . +.
T Consensus 105 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~ 184 (331)
T 3u83_A 105 GVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIR 184 (331)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEE
T ss_pred cEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeE
Confidence 99999853211 011 1 02335 77999996 1 11
Q ss_pred -cCC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 -NDG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 -~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..+ ..|.|..++.+|+|.|+|.|.|..|
T Consensus 185 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 218 (331)
T 3u83_A 185 NPNGTVTVISRYRLVPSREAHQQSLACIVNYHMD 218 (331)
T ss_dssp CTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTE
T ss_pred CCCCcEEEEEEEEEEeccccCCCEEEEEEecCCC
Confidence 011 2477777799999999999999987
No 146
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.36 E-value=1.1e-12 Score=98.02 Aligned_cols=115 Identities=20% Similarity=0.176 Sum_probs=80.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEc----ccCCCCCEEEEEEEEEec---
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLT----KIRESDQGWYECKVVFLN--- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~----~v~~~D~G~Y~C~~~~~~--- 81 (145)
..+.++.+.|-+.|.|.+.+.|+|++.. +......|..+. ..+++|.|. +++.+|+|.|+|.+.+..
T Consensus 30 ~~G~~v~l~C~~~g~p~~~v~W~k~g~~-l~~~~~~~~~~~-----~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~ 103 (404)
T 3p3y_A 30 DPRDNILIECEAKGNPAPSFHWTRNSRF-FNIAKDPRVSMR-----RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTA 103 (404)
T ss_dssp CSSSCCCCCEEECCSSCCEEEEEETTEE-CCGGGCSSCBCC-----SSSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEE
T ss_pred cCCCCEEEEEEecCCCCCeEEEEECCEE-eeeecCCcceEe-----cCCceEEEEeccCCCCccCCEEEEEEEEcCCCeE
Confidence 4567788889999999999999998853 222223343332 236666665 899999999999996431
Q ss_pred --------C--CCC---------CCCCCcEEEEEEeE----------E---------------ecCCcEEEEcccCCCC-
Q psy534 82 --------R--SPN---------SHKNGTWFHLDVHG----------V---------------FNDGTELRISNIRSQD- 116 (145)
Q Consensus 82 --------~--~~~---------~~~~g~~~~l~c~~----------~---------------~~~~~~L~i~~v~~~d- 116 (145)
+ .+. ....|+.+.|.|.. + ......|.|.+++.+|
T Consensus 104 ~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~ 183 (404)
T 3p3y_A 104 LSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDM 183 (404)
T ss_dssp EEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGG
T ss_pred eeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccC
Confidence 0 111 12358899999971 0 1123479999999999
Q ss_pred CeeeEEEEecCCC
Q psy534 117 IGDYTCLATHVLY 129 (145)
Q Consensus 117 ~G~Y~C~a~n~~g 129 (145)
+|.|+|.|.|..|
T Consensus 184 ~G~Y~C~a~n~~~ 196 (404)
T 3p3y_A 184 QTDYSCNARFHFT 196 (404)
T ss_dssp SSCBEEEEECTTT
T ss_pred CcceEEEEEeccc
Confidence 5999999999876
No 147
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.36 E-value=4e-13 Score=99.79 Aligned_cols=121 Identities=7% Similarity=-0.053 Sum_probs=79.3
Q ss_pred hhccceeeEEeecC-----CCccEEEEecCCCCccccc-----ccceEEEecC--C-----CCCCeeeEEEcccCCCCCE
Q psy534 9 SIFQMLSVGDFADD-----EDIPVYIWYDSYPTHEAEE-----YKGRISRVDK--E-----SPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 9 ~~~~~~~~~~w~~g-----~p~p~~~w~k~~~~~~~~~-----~~~R~~~~~~--~-----~~~~~~sL~I~~v~~~D~G 71 (145)
..+.++.+.|-+.| .|.|.+.|++++....... -.+++.+... + ...+..+|.|.+++.+|+|
T Consensus 189 ~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 268 (363)
T 1wio_A 189 KEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAG 268 (363)
T ss_dssp ETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCE
T ss_pred ecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCc
Confidence 34667788887776 7899999999875422110 0223322110 0 0122559999999999999
Q ss_pred EEEEEEEEe--cCCCC-------CCCCCcEEEEEEeE-----------EecC------CcEEEEcccCCCCCeeeEEEEe
Q psy534 72 WYECKVVFL--NRSPN-------SHKNGTWFHLDVHG-----------VFND------GTELRISNIRSQDIGDYTCLAT 125 (145)
Q Consensus 72 ~Y~C~~~~~--~~~~~-------~~~~g~~~~l~c~~-----------~~~~------~~~L~i~~v~~~d~G~Y~C~a~ 125 (145)
.|.|.+.+. ..... ....|..+.|.|.. +..+ +..|.|.+++.+|+|.|+|.|.
T Consensus 269 ~Y~C~a~n~~~~g~~~~~~~l~V~~v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 348 (363)
T 1wio_A 269 SGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLS 348 (363)
T ss_dssp EEEEEECBTTTTCCEEEEEEEEEEEECCCSSSEEEEEESSCCTTCCEEEECSSSSCSEEESSSEEEESSCCSEEEEEEEC
T ss_pred EEEEEEEEhhhcCeEEEEEeEEEEEecCCCeeEEEEEccccCCCccEEEEeCCCceeeeeeeeeeeeccccceeEEEEEe
Confidence 999999765 21000 01226778888872 1111 2357889999999999999999
Q ss_pred cCCC
Q psy534 126 HVLY 129 (145)
Q Consensus 126 n~~g 129 (145)
|.-.
T Consensus 349 ~~~~ 352 (363)
T 1wio_A 349 DSGQ 352 (363)
T ss_dssp SSSS
T ss_pred cCCe
Confidence 8754
No 148
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.36 E-value=6.5e-13 Score=97.49 Aligned_cols=114 Identities=17% Similarity=0.290 Sum_probs=81.2
Q ss_pred hhccceeeEEe-----ecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec--
Q psy534 9 SIFQMLSVGDF-----ADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN-- 81 (145)
Q Consensus 9 ~~~~~~~~~~w-----~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~-- 81 (145)
..+.++.+.|- ..|.|.+.+.|++++.... .-..+.... .+.++|.|.+++.+|+|.|+|.+.+..
T Consensus 133 ~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~--~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 205 (339)
T 3o4o_C 133 TLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLD--KDNEKFLSV-----RGTTHLLVHDVALEDAGYYRCVLTFAHEG 205 (339)
T ss_dssp ETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCC--TTCSSEEEC-----TTSSEEEESSCCGGGCEEEEEEEECCBTT
T ss_pred ECCCCEEEEecCCcccccCCCCceEEEecCCeeCC--CCCceeEEc-----CCcceEEEcccCHhhCeEEEEEEEECCCC
Confidence 34667788888 6788999999999875422 122344442 224689999999999999999996421
Q ss_pred ------------C-------CC------C--CCCCCcEEEEEEeE---E----------ec-------------------
Q psy534 82 ------------R-------SP------N--SHKNGTWFHLDVHG---V----------FN------------------- 102 (145)
Q Consensus 82 ------------~-------~~------~--~~~~g~~~~l~c~~---~----------~~------------------- 102 (145)
+ +| . ....|+.+.|.|.. . ..
T Consensus 206 ~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~ 285 (339)
T 3o4o_C 206 QQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPR 285 (339)
T ss_dssp BCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCC
T ss_pred eEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecce
Confidence 0 01 0 12348888888873 1 00
Q ss_pred -----CCc-----EEEEcccCCCCC-eeeEEEEecCCC
Q psy534 103 -----DGT-----ELRISNIRSQDI-GDYTCLATHVLY 129 (145)
Q Consensus 103 -----~~~-----~L~i~~v~~~d~-G~Y~C~a~n~~g 129 (145)
++. .|.|.+++.+|+ |.|+|.|.|.+|
T Consensus 286 ~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G 323 (339)
T 3o4o_C 286 QEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLS 323 (339)
T ss_dssp EECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTE
T ss_pred EEecccCceEEEEEEEEEEechhhcCccEEEEEEeccC
Confidence 111 699999999998 999999999999
No 149
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.36 E-value=2.7e-12 Score=92.72 Aligned_cols=120 Identities=19% Similarity=0.242 Sum_probs=82.1
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCCC----------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYPT----------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~~----------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+-|.+.+. +.+.+.||+.... .....+.+|+.+..+ ......+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 90 (280)
T 3fku_X 12 KKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITAD-QSTRTAYMDLRSLRSED 90 (280)
T ss_dssp ECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEE-TTTTEEEEEECSCCSTT
T ss_pred ECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEe-CCCCEEEEEECCCChhh
Confidence 4567788889988865 5678999875310 111234467766421 22446799999999999
Q ss_pred CEEEEEEEEEe--------c-----------CCC---------------C---------CCCCCcEEEEEEeEEe-----
Q psy534 70 QGWYECKVVFL--------N-----------RSP---------------N---------SHKNGTWFHLDVHGVF----- 101 (145)
Q Consensus 70 ~G~Y~C~~~~~--------~-----------~~~---------------~---------~~~~g~~~~l~c~~~~----- 101 (145)
+|.|+|.+.+. . +.. . ....|+.++|.|....
T Consensus 91 sG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~v~L~C~~~~~~~~~ 170 (280)
T 3fku_X 91 TAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQTATLTCTGNSNNVGN 170 (280)
T ss_dssp CEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCCEEEEEECCCCCCCT
T ss_pred CEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCCEEEEEEecCCCCCC
Confidence 99999999764 0 011 0 1235899999997110
Q ss_pred ------c-------------------------------CCcEEEEcccCCCCCeeeEEEEecCC
Q psy534 102 ------N-------------------------------DGTELRISNIRSQDIGDYTCLATHVL 128 (145)
Q Consensus 102 ------~-------------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~ 128 (145)
. ....|.|.+++.+|+|.|+|.+.|..
T Consensus 171 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 171 QGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp TCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred ceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 0 00139999999999999999999875
No 150
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.36 E-value=1.2e-11 Score=85.94 Aligned_cols=121 Identities=15% Similarity=0.099 Sum_probs=81.7
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCCC------------------cccccccceEEEecCCCCCCeeeEEEcccCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYPT------------------HEAEEYKGRISRVDKESPFGMASLNLTKIRE 67 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~~------------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~ 67 (145)
+..+..+.+-|-+.+.+ .+.+.||+.... .....+++|+.+..+ ...++.+|.|.+++.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~ 90 (221)
T 3m8o_H 12 VQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRD-DSKNTAFLQMNSLKS 90 (221)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEE-GGGTEEEEEECSCCG
T ss_pred EcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEec-CCCCEEEEEECCCCH
Confidence 45677788888887643 577888864311 112346688877532 123467899999999
Q ss_pred CCCEEEEEEEEEec------------C------CC-------CCCCCCcEEEEEEeEE------------e---------
Q psy534 68 SDQGWYECKVVFLN------------R------SP-------NSHKNGTWFHLDVHGV------------F--------- 101 (145)
Q Consensus 68 ~D~G~Y~C~~~~~~------------~------~~-------~~~~~g~~~~l~c~~~------------~--------- 101 (145)
+|+|.|+|.+.+.. + .| .....|..+.|.|... .
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~ 170 (221)
T 3m8o_H 91 DDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTAR 170 (221)
T ss_dssp GGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSCCCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEE
T ss_pred HHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCcccccCCCEEEEEEEEeeECCCCEEEEEEECCEECceE
Confidence 99999999996431 0 01 0013688999999710 0
Q ss_pred -------c-CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 -------N-DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 -------~-~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
. ++ ..|.|.....+|.|.|+|.|.|..+
T Consensus 171 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~ 211 (221)
T 3m8o_H 171 NFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTN 211 (221)
T ss_dssp ECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTS
T ss_pred EcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCC
Confidence 0 11 1377888888899999999999887
No 151
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.36 E-value=4.9e-12 Score=87.79 Aligned_cols=67 Identities=12% Similarity=0.045 Sum_probs=48.2
Q ss_pred hhhccceeeEEeecCCCc-cEEEEecCCCCc----------ccccccceEE----------EecCCCCCCeeeEEEcccC
Q psy534 8 KSIFQMLSVGDFADDEDI-PVYIWYDSYPTH----------EAEEYKGRIS----------RVDKESPFGMASLNLTKIR 66 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~-p~~~w~k~~~~~----------~~~~~~~R~~----------~~~~~~~~~~~sL~I~~v~ 66 (145)
...+.++.+.|-+.+.|. +.+.|++++... ....+.+|+. + ..+++|.|.+++
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~------~~~~~L~i~~v~ 85 (231)
T 2pet_A 12 VMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQL------DSQGRLVLAEAQ 85 (231)
T ss_dssp EETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEE------CTTCCEEESSCC
T ss_pred EEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCcccccccccccccccccc------CCCceEEEcccC
Confidence 345677888898888884 899999765321 1122456665 4 224669999999
Q ss_pred CCCCEEEEEEEEEe
Q psy534 67 ESDQGWYECKVVFL 80 (145)
Q Consensus 67 ~~D~G~Y~C~~~~~ 80 (145)
.+|+|.|.|.+.+.
T Consensus 86 ~~D~G~Y~C~~~~~ 99 (231)
T 2pet_A 86 VGDERDYVCVVRAG 99 (231)
T ss_dssp GGGCEEEEEEEECG
T ss_pred cccCceEEEEEEec
Confidence 99999999998543
No 152
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.35 E-value=7.6e-12 Score=89.79 Aligned_cols=112 Identities=11% Similarity=0.151 Sum_probs=75.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|...+ +.+.+.|||++..........+.. ....+.+|.|.+++.+|+|.|+|.+.+..
T Consensus 18 V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~-----~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s 91 (257)
T 1b6u_A 18 VKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHH-----DGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLS 91 (257)
T ss_dssp EESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCC-----TTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCC
T ss_pred ecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeecc-----CCCceEEEEeecCCcccCEEEEEeEeccCCCcccc
Confidence 446778889999875 467899999985421111000000 11347889999999999999999986321
Q ss_pred ---------C-----------CCC-CCCCCcEEEEEEeE--------Ee---------------c---CCcEEEEcccCC
Q psy534 82 ---------R-----------SPN-SHKNGTWFHLDVHG--------VF---------------N---DGTELRISNIRS 114 (145)
Q Consensus 82 ---------~-----------~~~-~~~~g~~~~l~c~~--------~~---------------~---~~~~L~i~~v~~ 114 (145)
+ .+. ....|+.++|.|.. .. . ....|.|.+++
T Consensus 92 ~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~- 170 (257)
T 1b6u_A 92 APSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT- 170 (257)
T ss_dssp CCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSCCSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC-
T ss_pred ccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCCCcEEEEEECCcccCcccccccccCCceeEEEEecccc-
Confidence 0 011 13469999999981 00 0 13479999998
Q ss_pred CCCeeeEEEEecC
Q psy534 115 QDIGDYTCLATHV 127 (145)
Q Consensus 115 ~d~G~Y~C~a~n~ 127 (145)
|+|.|+|.|.+.
T Consensus 171 -D~G~Y~C~a~~~ 182 (257)
T 1b6u_A 171 -HGGTYRCFGSFR 182 (257)
T ss_dssp -SCEEEEEEEECS
T ss_pred -cCEEEEEEEEcC
Confidence 999999999975
No 153
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.35 E-value=6e-12 Score=88.06 Aligned_cols=121 Identities=15% Similarity=0.147 Sum_probs=81.5
Q ss_pred HhhhccceeeEEeecCCCc----cEEEEecCC---CCc------------ccccccceEEEecCCCCCCeeeEEEcccCC
Q psy534 7 VKSIFQMLSVGDFADDEDI----PVYIWYDSY---PTH------------EAEEYKGRISRVDKESPFGMASLNLTKIRE 67 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~----p~~~w~k~~---~~~------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~ 67 (145)
.+..+..+.+-|.+.+.|. +.+.||++. ... ....+.+|+.+..+ ...++.+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~ 89 (228)
T 3bae_H 11 LLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKD-TSRDMVFMKITSVDT 89 (228)
T ss_dssp EECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEE-TTTTEEEEEECSCCG
T ss_pred eecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEc-CCCCeEEEEEcCCCc
Confidence 3566788889999988775 889998753 110 11235678887532 123468999999999
Q ss_pred CCCEEEEEEEEEec-------------C------C------CC--------CCCCCcEEEEEEeEE-----------ecC
Q psy534 68 SDQGWYECKVVFLN-------------R------S------PN--------SHKNGTWFHLDVHGV-----------FND 103 (145)
Q Consensus 68 ~D~G~Y~C~~~~~~-------------~------~------~~--------~~~~g~~~~l~c~~~-----------~~~ 103 (145)
+|+|.|+|.+.+.. . . |. ....|..+.|.|... ..+
T Consensus 90 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~ 169 (228)
T 3bae_H 90 ADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSG 169 (228)
T ss_dssp GGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeC
Confidence 99999999996531 0 0 10 113588999999821 001
Q ss_pred ---------------C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 ---------------G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 ---------------~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|..+..++ |.|+|.|.|..+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~ 214 (228)
T 3bae_H 170 SLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPAS 214 (228)
T ss_dssp TCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred CcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCC
Confidence 1 136777777655 999999999987
No 154
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.35 E-value=1.2e-12 Score=94.85 Aligned_cols=113 Identities=14% Similarity=0.065 Sum_probs=75.2
Q ss_pred hhccceeeEEeecCC-CccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 9 SIFQMLSVGDFADDE-DIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~-p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
..+.++.+.|-+.+. |.+.+.|++++.. +.. ..+..+. .+..+|.|.+++.+|+|.|+|.+.+...
T Consensus 19 ~~G~~v~l~C~~~~~~p~~~v~W~~~~~~-~~~--~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 90 (317)
T 2y25_A 19 TGECNVLLKCKVANIKKETHIVWYKDERE-ISV--DEKHDFK-----DGICTLLITEFSKKDAGIYEVILKDDRGKDKSR 90 (317)
T ss_dssp ETTTEEEEEEEEESCCTTCEEEEEETTEE-ECC--SCC----------CCEEEEETTCCSTTCSCEEEEEESSSCEEEEE
T ss_pred CCCCeEEEEEEEcCCCCCCEEEEEECCeE-cCC--CCcEEEE-----CCeEEEEEccCCcccCeEEEEEEECCCCcEEEE
Confidence 356678888988877 8899999998753 221 1233321 3468999999999999999999965321
Q ss_pred -------CC--------CCCCCCcEEEEEEeE-------------------Ee---------------cCC--cEEEEcc
Q psy534 83 -------SP--------NSHKNGTWFHLDVHG-------------------VF---------------NDG--TELRISN 111 (145)
Q Consensus 83 -------~~--------~~~~~g~~~~l~c~~-------------------~~---------------~~~--~~L~i~~ 111 (145)
.+ .....|..+.|.|.. +. ..+ ..|.|.+
T Consensus 91 ~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 170 (317)
T 2y25_A 91 LKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINE 170 (317)
T ss_dssp ECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEES
T ss_pred EEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECc
Confidence 00 001234555555540 00 011 2399999
Q ss_pred cCCCCCeeeEEEEecCCC
Q psy534 112 IRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 112 v~~~d~G~Y~C~a~n~~g 129 (145)
++.+|+|.|+|.|.|..|
T Consensus 171 ~~~~d~G~Y~C~a~n~~g 188 (317)
T 2y25_A 171 PTPNDKGKYVMELFDGKT 188 (317)
T ss_dssp CCGGGCEEEEEEEECSSC
T ss_pred CCcccCeeEEEEEEeCCc
Confidence 999999999999999988
No 155
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.35 E-value=5.4e-12 Score=91.08 Aligned_cols=128 Identities=16% Similarity=0.199 Sum_probs=85.9
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC--C-c-------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP--T-H-------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~--~-~-------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+..+.+.|.+.|.| .+.+.||++.. . . ....+.+|+.+..+ ......+|.|.+++.+|
T Consensus 38 v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 116 (282)
T 1qok_A 38 VRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTD-TSSNTAYLQLSSLTSED 116 (282)
T ss_dssp EETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEe-cCCCeEEEEECcCChhh
Confidence 34567788889988775 67899998642 1 0 11234577776432 12346899999999999
Q ss_pred CEEEEEEEEEec---------------C--CC-------------C------C----CCCCcEEEEEEeEE--------e
Q psy534 70 QGWYECKVVFLN---------------R--SP-------------N------S----HKNGTWFHLDVHGV--------F 101 (145)
Q Consensus 70 ~G~Y~C~~~~~~---------------~--~~-------------~------~----~~~g~~~~l~c~~~--------~ 101 (145)
+|.|+|.+.+.. + .+ . + ...|+.++|.|... +
T Consensus 117 sG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~v~W~ 196 (282)
T 1qok_A 117 TAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSVSYMHWF 196 (282)
T ss_dssp CEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCCSCCEEE
T ss_pred CEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCCceEEEE
Confidence 999999996531 0 11 0 0 23488999999820 0
Q ss_pred c-------------------------------CCcEEEEcccCCCCCeeeEEEEecCC------CCcEEEEe
Q psy534 102 N-------------------------------DGTELRISNIRSQDIGDYTCLATHVL------YPDLLVVL 136 (145)
Q Consensus 102 ~-------------------------------~~~~L~i~~v~~~d~G~Y~C~a~n~~------g~~~~v~~ 136 (145)
. ...+|.|.+++.+|+|.|+|.|.|.. |..+.|..
T Consensus 197 k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 197 QQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp EECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred EECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 0 01259999999999999999999843 25666653
No 156
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.34 E-value=6e-12 Score=87.89 Aligned_cols=120 Identities=17% Similarity=0.164 Sum_probs=82.3
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC-Cc---------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP-TH---------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~~---------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.|.+ .+.+.||++.. .. ....+.+|+.+..+ ...++.+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 90 (225)
T 1op3_H 12 VKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRD-DLEDFVYLQMHKMRVED 90 (225)
T ss_dssp EETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred ecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEec-CCCCEEEEEECCCChhh
Confidence 45677888899988776 67899988641 10 01235678876532 23457899999999999
Q ss_pred CEEEEEEEEEec------------C-------C-----CC--------CCCCCcEEEEEEeEE-----------e-----
Q psy534 70 QGWYECKVVFLN------------R-------S-----PN--------SHKNGTWFHLDVHGV-----------F----- 101 (145)
Q Consensus 70 ~G~Y~C~~~~~~------------~-------~-----~~--------~~~~g~~~~l~c~~~-----------~----- 101 (145)
+|.|+|.+.+.. . . |. ....|..+.|.|... .
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 170 (225)
T 1op3_H 91 TAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 170 (225)
T ss_dssp CEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTTSCC
T ss_pred CEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecCCCc
Confidence 999999996531 0 0 10 123588999999810 0
Q ss_pred -----------cCC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 -----------NDG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 -----------~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.++ ..|.|..+..+| |.|+|.|.|..+
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 213 (225)
T 1op3_H 171 SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 213 (225)
T ss_dssp TTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGG
T ss_pred CCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCC
Confidence 011 137888888888 999999999765
No 157
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.33 E-value=5.2e-12 Score=93.01 Aligned_cols=113 Identities=17% Similarity=0.143 Sum_probs=79.5
Q ss_pred hhccceeeEEeecCCCc-----------cEEEEecCCCCcc-cc-----cccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 9 SIFQMLSVGDFADDEDI-----------PVYIWYDSYPTHE-AE-----EYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~-----------p~~~w~k~~~~~~-~~-----~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
..+.++.+.|-+.|.|. +.+.|++++.... .. ....|+.. .+.+|.|.+++.+|+|
T Consensus 20 ~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~-------~~~~L~i~~~~~~D~G 92 (349)
T 4dep_C 20 FEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISK-------EKDVLWFRPTLLNDTG 92 (349)
T ss_dssp ETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEE-------ETTEEEESSCCGGGCE
T ss_pred ecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEee-------cCCEEEEccCChhhCE
Confidence 45678888898887665 9999999874210 00 12233332 2668999999999999
Q ss_pred EEEEEEEEec----------C--CCC------------CCCCCcEEEEEEeE--------------Ee------------
Q psy534 72 WYECKVVFLN----------R--SPN------------SHKNGTWFHLDVHG--------------VF------------ 101 (145)
Q Consensus 72 ~Y~C~~~~~~----------~--~~~------------~~~~g~~~~l~c~~--------------~~------------ 101 (145)
.|.|.+.+.. + .+. ....|+.+.|.|.. +.
T Consensus 93 ~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~ 172 (349)
T 4dep_C 93 NYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNV 172 (349)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSE
T ss_pred EEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccce
Confidence 9999996532 1 110 12358899999941 11
Q ss_pred -cCCcEEEEcccCCCCCeeeEEEEecCC
Q psy534 102 -NDGTELRISNIRSQDIGDYTCLATHVL 128 (145)
Q Consensus 102 -~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 128 (145)
..+..|.|.+++.+|+|.|+|.|.|..
T Consensus 173 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 200 (349)
T 4dep_C 173 IPEGMNLSFLIALISNNGNYTCVVTYPE 200 (349)
T ss_dssp EEETTEEEEESCCGGGCEEEEEEEEEEE
T ss_pred eecCCEEEEeeeeecCCcEEEEEEEEee
Confidence 123479999999999999999999987
No 158
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.33 E-value=3e-13 Score=98.98 Aligned_cols=113 Identities=14% Similarity=0.219 Sum_probs=33.5
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec----
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN---- 81 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~---- 81 (145)
....+.++.+.|-+.|. |.+.+.|++++... . ...|+.+ .+++|.|.+++.+|+|.|+|.+.+..
T Consensus 19 ~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~-~--~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~ 88 (334)
T 1ry7_B 19 VFGSGDAVELSCPPPGGGPMGPTVWVKDGTGL-V--PSERVLV-------GPQRLQVLNASHEDSGAYSCRQRLTQRVLC 88 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCCcEEEEeeCCCCCCCcceEEEECCeeC-C--CcccEEe-------ccceEEEeecccccCEEEEEEEEeCCeEEE
Confidence 34566778888988876 68899999997542 1 1234332 36799999999999999999996531
Q ss_pred -----C--C----------------------CC------------CCCCCcEEEEEEeE---------Ee----------
Q psy534 82 -----R--S----------------------PN------------SHKNGTWFHLDVHG---------VF---------- 101 (145)
Q Consensus 82 -----~--~----------------------~~------------~~~~g~~~~l~c~~---------~~---------- 101 (145)
+ . |. ....|+.+.|.|.. +.
T Consensus 89 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~ 168 (334)
T 1ry7_B 89 HFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEH 168 (334)
T ss_dssp ------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTS
T ss_pred EEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccc
Confidence 0 0 00 01248889999981 00
Q ss_pred --------cCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 --------NDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 --------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.....|.|.+++.+|+|.|+|.|.|..|
T Consensus 169 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 204 (334)
T 1ry7_B 169 RIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFG 204 (334)
T ss_dssp STTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTE
T ss_pred cccceecccceEEEEECCCCcccCEEEEEEEEeCCC
Confidence 1123799999999999999999999987
No 159
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.33 E-value=2.2e-12 Score=91.47 Aligned_cols=119 Identities=18% Similarity=0.162 Sum_probs=80.8
Q ss_pred hhhccceeeEEeecCCC-----ccEEEEecCCC-Cc----------ccccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 8 KSIFQMLSVGDFADDED-----IPVYIWYDSYP-TH----------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p-----~p~~~w~k~~~-~~----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
+..+.++.+.|-+.|.| .+.+.|||++. .. ....+.+|+.+.. ..++.+|.|.+++.+|+|
T Consensus 46 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G 122 (252)
T 3bkj_L 46 VNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG---SGTDFTLRISRVEAEDLG 122 (252)
T ss_dssp ECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCE
T ss_pred EeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc---cCCEEEEEECCCCcccCE
Confidence 45667888899998887 68899998642 10 1123456666532 134679999999999999
Q ss_pred EEEEEEEEec-----------C-----CCCC--------CCCCcEEEEEEeEE-----------ec--------------
Q psy534 72 WYECKVVFLN-----------R-----SPNS--------HKNGTWFHLDVHGV-----------FN-------------- 102 (145)
Q Consensus 72 ~Y~C~~~~~~-----------~-----~~~~--------~~~g~~~~l~c~~~-----------~~-------------- 102 (145)
.|+|.+.+.. + +|.. ...|..+.|.|... ..
T Consensus 123 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 202 (252)
T 3bkj_L 123 VYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWT 202 (252)
T ss_dssp EEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEEC
T ss_pred EEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecC
Confidence 9999985431 1 1110 01377899999810 00
Q ss_pred -----CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 -----DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 -----~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
++ ..|.|..+..+|+|.|+|.|.|...
T Consensus 203 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 239 (252)
T 3bkj_L 203 DQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 239 (252)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred cccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCC
Confidence 01 1378888888899999999999864
No 160
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.33 E-value=6.3e-12 Score=102.11 Aligned_cols=111 Identities=19% Similarity=0.271 Sum_probs=82.1
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccC-CCCCEEEEEEEEEecC------
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIR-ESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~-~~D~G~Y~C~~~~~~~------ 82 (145)
.+.++.+.|-+.|.|.+.+.|++++... . ...+... ..+++|.|.++. .+|+|.|+|.+.+...
T Consensus 540 ~G~~v~l~C~~~g~p~~~i~W~k~~~~l-~--~~~~~~~------~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~ 610 (816)
T 3dmk_A 540 AGETLIVTCPVAGYPIDSIVWERDNRAL-P--INRKQKV------FPNGTLIIENVERNSDQATYTCVAKNQEGYSARGS 610 (816)
T ss_dssp TTCCEEEECCEECSSEEEEEEEETTEES-C--CSTTEEE------CTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEE
T ss_pred cCCeEEEEEEecCCCCCEEEEEECCeEc-c--cCCceEE------ecCCeEEEEecCccccCEEEEEEEEECCCceeeee
Confidence 4567788898889999999999987532 1 2233333 237789999998 6999999999976421
Q ss_pred -------CCC---------CCCCCcEEEEEEeE----------Ee------------------cCCcEEEEcccCCCCCe
Q psy534 83 -------SPN---------SHKNGTWFHLDVHG----------VF------------------NDGTELRISNIRSQDIG 118 (145)
Q Consensus 83 -------~~~---------~~~~g~~~~l~c~~----------~~------------------~~~~~L~i~~v~~~d~G 118 (145)
+|. ....|+.+.|.|.. +. .....|.|.+++.+|+|
T Consensus 611 ~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 690 (816)
T 3dmk_A 611 LEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAG 690 (816)
T ss_dssp EEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCE
T ss_pred EEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCE
Confidence 111 12359999999981 00 11246999999999999
Q ss_pred eeEEEEecCCC
Q psy534 119 DYTCLATHVLY 129 (145)
Q Consensus 119 ~Y~C~a~n~~g 129 (145)
.|+|.|.|..|
T Consensus 691 ~Y~C~a~N~~g 701 (816)
T 3dmk_A 691 NFTCHARNLAG 701 (816)
T ss_dssp EEEEEEECSSC
T ss_pred EEEEEEEeCCc
Confidence 99999999998
No 161
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.32 E-value=1.7e-12 Score=95.60 Aligned_cols=111 Identities=17% Similarity=0.214 Sum_probs=61.6
Q ss_pred hhccceeeEEee-----cCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec--
Q psy534 9 SIFQMLSVGDFA-----DDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN-- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~-----~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~-- 81 (145)
..+.++.+.|-. .|.|.|.+.|+|++.. +... .++.. ....|.|.+++.+|+|.|+|.+.+..
T Consensus 133 ~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~-l~~~--~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~~g 202 (349)
T 4dep_C 133 IEYGIQRITCPNVDGYFPSSVKPTITWYMGCYK-IQNF--NNVIP-------EGMNLSFLIALISNNGNYTCVVTYPENG 202 (349)
T ss_dssp TTCSEEEEECCSCTTSSCTTSCCEEEEEETTEE-CCSC--SSEEE-------ETTEEEEESCCGGGCEEEEEEEEEEETT
T ss_pred ecCccEEEEcCCCcccccCCCCceEEEeeCCEE-CCCc--cceee-------cCCEEEEeeeeecCCcEEEEEEEEeeCC
Confidence 345667788864 6789999999999753 2211 22221 14679999999999999999996531
Q ss_pred ------------C--------CCC----------CCCCCcEEEEEEeEE-------------ecC---------------
Q psy534 82 ------------R--------SPN----------SHKNGTWFHLDVHGV-------------FND--------------- 103 (145)
Q Consensus 82 ------------~--------~~~----------~~~~g~~~~l~c~~~-------------~~~--------------- 103 (145)
+ +|. ....|+.+.|.|... ..+
T Consensus 203 ~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~ 282 (349)
T 4dep_C 203 RTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINE 282 (349)
T ss_dssp EEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCE
T ss_pred EEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCcccccc
Confidence 0 110 123477888999721 000
Q ss_pred -------C-----cEEEEcccCCCCC-eeeEEEEecCCC
Q psy534 104 -------G-----TELRISNIRSQDI-GDYTCLATHVLY 129 (145)
Q Consensus 104 -------~-----~~L~i~~v~~~d~-G~Y~C~a~n~~g 129 (145)
+ ..|.|.+++.+|+ |.|+|.|.|..|
T Consensus 283 ~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G 321 (349)
T 4dep_C 283 SISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKG 321 (349)
T ss_dssp EEECCTTCCEEEEECC-------------CEEEEECSSC
T ss_pred ceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCC
Confidence 0 1288999999999 999999999999
No 162
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.32 E-value=3.8e-12 Score=88.84 Aligned_cols=119 Identities=17% Similarity=0.168 Sum_probs=79.1
Q ss_pred hhhccceeeEEeecCCC-cc-EEEEecCCC--Cc---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 8 KSIFQMLSVGDFADDED-IP-VYIWYDSYP--TH---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p-~p-~~~w~k~~~--~~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
...+..+.+-|-+.|.+ .+ .+.||++.. .. ....+.+|+.... ...+.+|.|.+++.+|+|.|+
T Consensus 31 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~ 107 (234)
T 2j6e_L 31 GTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK---SGTSASLAISGLRSEDEADYY 107 (234)
T ss_dssp BCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE---ETTEEEEEEESCCSTTCSEEE
T ss_pred eeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe---cCCeEEEEECCCCHHHCEEEE
Confidence 45677888899988754 34 699998641 10 1122345665432 134679999999999999999
Q ss_pred EEEEEec-------------C------CCCC--------CCCCcEEEEEEeE-----------Ee---------------
Q psy534 75 CKVVFLN-------------R------SPNS--------HKNGTWFHLDVHG-----------VF--------------- 101 (145)
Q Consensus 75 C~~~~~~-------------~------~~~~--------~~~g~~~~l~c~~-----------~~--------------- 101 (145)
|.+.+.. + +|.. ...|..+.|.|.. +.
T Consensus 108 C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 187 (234)
T 2j6e_L 108 CATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKP 187 (234)
T ss_dssp EEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCC
T ss_pred EEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCc
Confidence 9997531 0 1110 0126789999971 00
Q ss_pred ---cC-----CcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 ---ND-----GTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ---~~-----~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.+ ...|.|..+..+|+|.|+|.|+|..+
T Consensus 188 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 223 (234)
T 2j6e_L 188 SKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 223 (234)
T ss_dssp CCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTB
T ss_pred eECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCC
Confidence 00 12478888889999999999999875
No 163
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.32 E-value=3.3e-12 Score=90.87 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=42.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCC---CCc-------------ccccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSY---PTH-------------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~---~~~-------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
+..+.++.+-|.+.+.+.+.+.||+.. ... ....+.+|..... +......+|.|.+++.+|+|
T Consensus 14 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~~L~I~~v~~~DsG 92 (259)
T 3omz_A 14 RQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTY-GSTRKNLRMILRNLIENDSG 92 (259)
T ss_dssp EETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEE-CC--CCCEEEESSCCGGGCE
T ss_pred ecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEee-cCCCCeEEEEECCCCcccCE
Confidence 456778888898888888899999832 110 1112222332221 12234678999999999999
Q ss_pred EEEEEEEE
Q psy534 72 WYECKVVF 79 (145)
Q Consensus 72 ~Y~C~~~~ 79 (145)
.|+|.+.+
T Consensus 93 ~Y~C~~~~ 100 (259)
T 3omz_A 93 VYYCATWD 100 (259)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEee
Confidence 99999964
No 164
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.31 E-value=3e-11 Score=86.49 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=49.8
Q ss_pred HhhhccceeeEEeecCCC------ccEEEEecCC--C-Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFADDED------IPVYIWYDSY--P-TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p------~p~~~w~k~~--~-~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
....+..+.+.|.+.+.| .+.+.||++. . .. + ...+.+|+.+.. ....++|.|.+++.+|
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~v~~~D 92 (264)
T 2gjj_A 16 PVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSG---SGTDFTLTIGSVKAED 92 (264)
T ss_dssp EEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE---ETTEEEEEESSCCGGG
T ss_pred EecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEec---CCCEEEEEECCCCHHH
Confidence 345677888999998887 6889999853 1 11 0 012356766532 1346799999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 93 sG~Y~C~~~~ 102 (264)
T 2gjj_A 93 LAVYYCQQYS 102 (264)
T ss_dssp CEEEEEEECS
T ss_pred CEEEEEEEec
Confidence 9999999853
No 165
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.31 E-value=2.4e-11 Score=84.01 Aligned_cols=118 Identities=15% Similarity=0.112 Sum_probs=73.2
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC--C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP--T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~--~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+-|-+.+. +.+.+.||+... . .....+.+|+.+.. ..++.+|.|.+++.+|+
T Consensus 11 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~ 87 (215)
T 3nl4_H 11 VTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK---TSTTVDLKITSPTTEDT 87 (215)
T ss_dssp ECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE---CSSEEEEEESSCCGGGC
T ss_pred EcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe---eCCEEEEEECCCCcccC
Confidence 4456777788887653 356788876431 0 11234567777653 24578899999999999
Q ss_pred EEEEEEEEEec--------------C------CC--------CCCCCCcEEEEEEeE-----------Ee----------
Q psy534 71 GWYECKVVFLN--------------R------SP--------NSHKNGTWFHLDVHG-----------VF---------- 101 (145)
Q Consensus 71 G~Y~C~~~~~~--------------~------~~--------~~~~~g~~~~l~c~~-----------~~---------- 101 (145)
|.|+|.+.+.. + .| .....|..+.|.|.. +.
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~ 167 (215)
T 3nl4_H 88 ATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRT 167 (215)
T ss_dssp EEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred EEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEe
Confidence 99999996430 0 01 112348899999981 10
Q ss_pred -----cCCcEEEE---cccCCCCCeeeEEEEecCCC
Q psy534 102 -----NDGTELRI---SNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 -----~~~~~L~i---~~v~~~d~G~Y~C~a~n~~g 129 (145)
..+..+.+ ..+...| |.|+|.|.|..+
T Consensus 168 ~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~ 202 (215)
T 3nl4_H 168 FPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPAT 202 (215)
T ss_dssp CCCEECTTSCEEEEEEEEECC----CCEEEEEEGGG
T ss_pred cCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCC
Confidence 11224444 5577888 999999999986
No 166
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.31 E-value=1.4e-11 Score=86.75 Aligned_cols=70 Identities=16% Similarity=0.236 Sum_probs=52.1
Q ss_pred HhhhccceeeEEeecCCCccEEEEecC----------------CCCcccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDS----------------YPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~----------------~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
.+..+..+.+-|.+.+.+.+.+.||+. ........+.+|+.+..+ ..++.+|.|.+++.+|+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~L~I~~v~~~D~ 89 (246)
T 4dzb_B 12 ISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA--SLTLSTLTVTSAHPEDS 89 (246)
T ss_dssp EEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEE--ETTEEEEEECSCCGGGC
T ss_pred EEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEec--CCCEEEEEECCCCHHHC
Confidence 345677888999999888899999982 221223345678876532 13477999999999999
Q ss_pred EEEEEEEE
Q psy534 71 GWYECKVV 78 (145)
Q Consensus 71 G~Y~C~~~ 78 (145)
|.|+|.+.
T Consensus 90 G~Y~C~~~ 97 (246)
T 4dzb_B 90 SFYICSAR 97 (246)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 99999995
No 167
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.31 E-value=3e-13 Score=94.54 Aligned_cols=120 Identities=16% Similarity=0.097 Sum_probs=67.9
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC-Ccc----------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP-THE----------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~~~----------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
....+.++.+-|.+.+.|.+.+.||++.. ... ...+.+|+.... ..++.+|.|.+++.+|+|.|.|
T Consensus 34 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C 110 (233)
T 3bqu_C 34 SMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG---YGTDFVFTIENMLSEDVADYYC 110 (233)
T ss_dssp -------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE---EEEEEEEC-----CCCCSEEEE
T ss_pred EEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec---cCCEEEEEECCCCHHHCEEEEE
Confidence 34567788888998888777899998642 100 112334443311 1235589999999999999999
Q ss_pred EEEEecC----------------CCCC--------CCCCcEEEEEEeEE-----------ec------------------
Q psy534 76 KVVFLNR----------------SPNS--------HKNGTWFHLDVHGV-----------FN------------------ 102 (145)
Q Consensus 76 ~~~~~~~----------------~~~~--------~~~g~~~~l~c~~~-----------~~------------------ 102 (145)
.+.+... +|.. ...|..+.|.|... ..
T Consensus 111 ~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~ 190 (233)
T 3bqu_C 111 LQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDS 190 (233)
T ss_dssp EECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCT
T ss_pred EEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccC
Confidence 9954210 1100 01278999999810 00
Q ss_pred -CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 -DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 -~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
++ ..|.|..+..+|+|.|+|.|.|...
T Consensus 191 ~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 191 KDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp TTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 00 1467888888899999999999754
No 168
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.30 E-value=1.9e-12 Score=89.08 Aligned_cols=117 Identities=18% Similarity=0.184 Sum_probs=78.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCC---CCc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSY---PTH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~---~~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
+..+.++.+-|-+. |.+.+.||++. ... ....+.+|+.+.. ...+++|.|.+++.+|+|.|+|.
T Consensus 12 v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 12 GSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK---SGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp ECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE---ETTEEEEEEESCCGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc---cCCEEEEEECCCChhHCEEEEEE
Confidence 34567788888887 78889998842 110 0111345665432 24578999999999999999999
Q ss_pred EEEec------------C------CCCC--------CCCCcEEEEEEeE-----------EecC----------------
Q psy534 77 VVFLN------------R------SPNS--------HKNGTWFHLDVHG-----------VFND---------------- 103 (145)
Q Consensus 77 ~~~~~------------~------~~~~--------~~~g~~~~l~c~~-----------~~~~---------------- 103 (145)
+.+.. + +|.. ...|..+.|.|.. +..+
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 166 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQ 166 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEC
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceEC
Confidence 97621 0 1100 0138899999971 0001
Q ss_pred --C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 --G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 --~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|..+..+|+|.|+|.|.|..+
T Consensus 167 ~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~ 199 (211)
T 3tv3_L 167 SNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 199 (211)
T ss_dssp TTSSEEEEEEEEECHHHHHHSSCEEEEEEETTE
T ss_pred CCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCC
Confidence 1 2477888888899999999999976
No 169
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.29 E-value=2.2e-11 Score=94.40 Aligned_cols=117 Identities=13% Similarity=0.103 Sum_probs=77.0
Q ss_pred ccceeeEEeecCCCcc--EEEEecCCCCcccccccceEEEecCCCC-CCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 11 FQMLSVGDFADDEDIP--VYIWYDSYPTHEAEEYKGRISRVDKESP-FGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 11 ~~~~~~~~w~~g~p~p--~~~w~k~~~~~~~~~~~~R~~~~~~~~~-~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
+.++.+.|.+.|.|.+ .+.|+|++... .............+.. .....|.|.+++.+|+|.|+|.+.+...
T Consensus 129 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l-~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 207 (523)
T 2rcj_C 129 ANKATLVCLISDFYPGAVTVAWKADGSPV-KAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 207 (523)
T ss_pred CCceEEEEEeccccCCceEEEEecCCCCC-CCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccc
Confidence 5578889999987654 89999998542 2111100000000000 0135799999999999999999976321
Q ss_pred -----------CC--------CCCCCCcEEEEEEeE-----------Eec----------------CC-----cEEEEcc
Q psy534 83 -----------SP--------NSHKNGTWFHLDVHG-----------VFN----------------DG-----TELRISN 111 (145)
Q Consensus 83 -----------~~--------~~~~~g~~~~l~c~~-----------~~~----------------~~-----~~L~i~~ 111 (145)
+| .....|+.+.|.|.. +.. ++ ..|.|.+
T Consensus 208 ~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~ 287 (523)
T 2rcj_C 208 VAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS 287 (523)
T ss_pred eeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEech
Confidence 11 112458899999981 000 11 2689999
Q ss_pred cCCCCCeeeEEEEecCCC
Q psy534 112 IRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 112 v~~~d~G~Y~C~a~n~~g 129 (145)
++.+| |.|+|.|.|..|
T Consensus 288 ~~~~d-G~Y~C~a~n~~g 304 (523)
T 2rcj_C 288 SSLGT-QTYICNVNHKPS 304 (523)
T ss_pred hhcCC-ceEEEEEEeCCC
Confidence 99999 999999999998
No 170
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.29 E-value=3.7e-12 Score=93.31 Aligned_cols=116 Identities=12% Similarity=0.127 Sum_probs=79.0
Q ss_pred HhhhccceeeEEeecCC-Ccc---EEEEecCCCCcccc-------cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDE-DIP---VYIWYDSYPTHEAE-------EYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p---~~~w~k~~~~~~~~-------~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
....+.++.+.|.+.|. |.| .+.||++++..+.. .+.+++. ..++|.|.+++.+|+|.|+|
T Consensus 124 ~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~--------~~~~L~I~~~~~~D~G~Y~C 195 (323)
T 2wqr_A 124 DLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLT--------VTSTLPVGTRDWIEGETYQC 195 (323)
T ss_dssp HHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEE--------EEEEEECCHHHHHTTCCEEE
T ss_pred HhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEE--------EEEEEEECHHHccCCCCEEE
Confidence 34567888999998874 666 89999975332221 1112211 25689999999999999999
Q ss_pred EEEEecC----------------CC--------CCCCCCcEEEEEEeE-----------Eec------------------
Q psy534 76 KVVFLNR----------------SP--------NSHKNGTWFHLDVHG-----------VFN------------------ 102 (145)
Q Consensus 76 ~~~~~~~----------------~~--------~~~~~g~~~~l~c~~-----------~~~------------------ 102 (145)
.+.+... +| .....|..+.|.|.. +..
T Consensus 196 ~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 275 (323)
T 2wqr_A 196 RVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKT 275 (323)
T ss_dssp EEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEEC
T ss_pred EEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccC
Confidence 9965320 11 011238999999971 000
Q ss_pred -CC-----cEEEEcccCCCCCeeeEEEEecCCCC
Q psy534 103 -DG-----TELRISNIRSQDIGDYTCLATHVLYP 130 (145)
Q Consensus 103 -~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g~ 130 (145)
++ ..|.|..+..+|+|.|+|.|.|....
T Consensus 276 ~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 276 KGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp SSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred CCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 11 24788888889999999999998764
No 171
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.28 E-value=1e-11 Score=91.76 Aligned_cols=121 Identities=16% Similarity=0.185 Sum_probs=82.4
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCC--CCc--------------ccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSY--PTH--------------EAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~--~~~--------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
....+..+.+.|-+.|. +.+.+.|||+. ... ....+.+|+.+..+ ...+.++|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~ 89 (344)
T 1za6_B 11 VVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTAD-TSASTAYVELSSLRSE 89 (344)
T ss_dssp EECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEE-TTTTEEEEEECSCCGG
T ss_pred EEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEe-cCCCEEEEEECCCCcc
Confidence 34567788899998876 46789999863 111 01235678876532 2234689999999999
Q ss_pred CCEEEEEEEEEe----------cC------CC--------CCCCCCcEEEEEEeEE-----------ecC----------
Q psy534 69 DQGWYECKVVFL----------NR------SP--------NSHKNGTWFHLDVHGV-----------FND---------- 103 (145)
Q Consensus 69 D~G~Y~C~~~~~----------~~------~~--------~~~~~g~~~~l~c~~~-----------~~~---------- 103 (145)
|+|.|+|.+.+. .+ +| .....|+.+.|.|... ..+
T Consensus 90 D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 169 (344)
T 1za6_B 90 DTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP 169 (344)
T ss_dssp GCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECC
T ss_pred cCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECC
Confidence 999999998431 11 11 1124689999999820 001
Q ss_pred ------C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 ------G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 ------~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|..+..+| |.|+|.|.|..+
T Consensus 170 ~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~ 205 (344)
T 1za6_B 170 AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 205 (344)
T ss_dssp CEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGG
T ss_pred CeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCC
Confidence 1 157788887777 999999999887
No 172
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.28 E-value=1.2e-11 Score=85.44 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=79.0
Q ss_pred hhhccceeeEEee-cCCC-ccEEEEecCCC-Ccc----------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 8 KSIFQMLSVGDFA-DDED-IPVYIWYDSYP-THE----------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 8 ~~~~~~~~~~~w~-~g~p-~p~~~w~k~~~-~~~----------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
...+.++.+.|-+ .+.+ .+.+.||+++. ... ...+.+|+.+.. ..++.+|.|.+++.+|+|.|.
T Consensus 12 v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~ 88 (216)
T 2xzc_L 12 AAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK---SGTSATLGITGLQTGDEADYY 88 (216)
T ss_dssp ECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE---ETTEEEEEECSCCGGGCEEEE
T ss_pred ecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec---cCCEEEEEECCCCcccCEEEE
Confidence 4567788888984 4443 67899998542 100 122345666532 134679999999999999999
Q ss_pred EEEEEec------------C-----CCCC---C-----CCCcEEEEEEeEE-----------e------c----------
Q psy534 75 CKVVFLN------------R-----SPNS---H-----KNGTWFHLDVHGV-----------F------N---------- 102 (145)
Q Consensus 75 C~~~~~~------------~-----~~~~---~-----~~g~~~~l~c~~~-----------~------~---------- 102 (145)
|.+.+.. + +|.. . ..|..+.|.|... . .
T Consensus 89 C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~ 168 (216)
T 2xzc_L 89 CGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ 168 (216)
T ss_dssp EEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCC
T ss_pred EEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcc
Confidence 9997531 0 1110 0 1277999999810 0 0
Q ss_pred ---CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 ---DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 ---~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
++ ..|.|..+..+|+|.|+|.|.|...
T Consensus 169 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (216)
T 2xzc_L 169 DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGL 203 (216)
T ss_dssp CTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred cCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCC
Confidence 01 1578888889999999999999864
No 173
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.28 E-value=9.9e-12 Score=93.99 Aligned_cols=115 Identities=20% Similarity=0.190 Sum_probs=76.1
Q ss_pred ccceeeEEeecC-CCcc-EEEEecCCCCcccccccceEEEec-CCCC-CCeeeEEEcccCCCCCEEEEEEEEEecCC---
Q psy534 11 FQMLSVGDFADD-EDIP-VYIWYDSYPTHEAEEYKGRISRVD-KESP-FGMASLNLTKIRESDQGWYECKVVFLNRS--- 83 (145)
Q Consensus 11 ~~~~~~~~w~~g-~p~p-~~~w~k~~~~~~~~~~~~R~~~~~-~~~~-~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~--- 83 (145)
+.++.+.|.+.| .|.| .+.|++++.. +............ .+.. ...+.|.|.+++.+|+|.|.|.+.+....
T Consensus 131 g~~~~l~C~~~g~~p~~~~v~W~k~g~~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 209 (438)
T 1qgc_4 131 SGGASVVCFLNNFYPKDINVKWKIDGSE-RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPI 209 (438)
T ss_dssp TTEEEEEEEEEEEBSSCEEEEEEETTEE-ECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCE
T ss_pred CCceEEEEEEccccCCCcEEEEEECCEE-cCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCce
Confidence 457888999886 6777 8999998753 2211000111111 0000 01468999999999999999999764210
Q ss_pred --------C---------CCCCCCcEEEEEEeEE-----------ecC--------------------------------
Q psy534 84 --------P---------NSHKNGTWFHLDVHGV-----------FND-------------------------------- 103 (145)
Q Consensus 84 --------~---------~~~~~g~~~~l~c~~~-----------~~~-------------------------------- 103 (145)
+ .....|+.+.|.|... ...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 289 (438)
T 1qgc_4 210 VKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTIS 289 (438)
T ss_dssp EEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEE
T ss_pred ecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEE
Confidence 0 1134589999999821 000
Q ss_pred ------CcEEEEcccCCCCCeeeEEEEec
Q psy534 104 ------GTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 104 ------~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
...|.|.+++.+|+|.|+|.|.|
T Consensus 290 ~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 318 (438)
T 1qgc_4 290 RDNAKNTLYLQMSSLRSADTAMYYCVRRE 318 (438)
T ss_dssp EETTTTEEEEEECSCCGGGCCEEEEEECC
T ss_pred eecCCCeEEEEECCCChhhCEEEEEEEEc
Confidence 12799999999999999999998
No 174
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.28 E-value=4.7e-11 Score=83.29 Aligned_cols=122 Identities=16% Similarity=0.136 Sum_probs=81.1
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---Cc-------------ccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---TH-------------EAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~-------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+..+..+.+-|.+.+.+ .+.+.||+... .. ....+.+|+.+..+ ...++.+|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~ 89 (223)
T 1dee_B 11 VVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRD-NSKNTLYLQMNSLRAE 89 (223)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEE-TTTTEEEEEECSCCGG
T ss_pred EEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEec-CCCCEEEEEECCCCHH
Confidence 345677888889888765 47788987531 10 11236678887543 2234789999999999
Q ss_pred CCEEEEEEEEEec----------------CC------CC--------CCCCCcEEEEEEeE-----------Eec-CC--
Q psy534 69 DQGWYECKVVFLN----------------RS------PN--------SHKNGTWFHLDVHG-----------VFN-DG-- 104 (145)
Q Consensus 69 D~G~Y~C~~~~~~----------------~~------~~--------~~~~g~~~~l~c~~-----------~~~-~~-- 104 (145)
|+|.|+|.+.+.. +. |. ....|..+.|.|.. +.. ++
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~ 169 (223)
T 1dee_B 90 DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSD 169 (223)
T ss_dssp GCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCB
T ss_pred HCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCc
Confidence 9999999996521 01 10 11358899999981 111 11
Q ss_pred -------------------cEEEEcccCC--CCCeeeEEEEecCCC
Q psy534 105 -------------------TELRISNIRS--QDIGDYTCLATHVLY 129 (145)
Q Consensus 105 -------------------~~L~i~~v~~--~d~G~Y~C~a~n~~g 129 (145)
..|.|..... +|.|.|+|.|.|..+
T Consensus 170 l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~ 215 (223)
T 1dee_B 170 ISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNG 215 (223)
T ss_dssp CSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTC
T ss_pred cceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCC
Confidence 1255555554 678999999999987
No 175
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.28 E-value=1.7e-11 Score=89.14 Aligned_cols=122 Identities=15% Similarity=0.146 Sum_probs=78.2
Q ss_pred hhhccceeeEEeecCCCcc-----EEEEecCCCCcc----------cccccceEEEecC--CCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDEDIP-----VYIWYDSYPTHE----------AEEYKGRISRVDK--ESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p-----~~~w~k~~~~~~----------~~~~~~R~~~~~~--~~~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+-|-+.+.+.+ .+.|+|++.... ......|..+... ....++++|.|.+++.+|+
T Consensus 12 ~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~ 91 (313)
T 4fqp_A 12 GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDE 91 (313)
T ss_dssp CBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGC
T ss_pred EecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhC
Confidence 3457788888988876655 488998864211 0011234443321 1223578899999999999
Q ss_pred EEEEEEEEEec-----------C--CC--------CCCCCCcEEEEEEeE----------Ee---------------cCC
Q psy534 71 GWYECKVVFLN-----------R--SP--------NSHKNGTWFHLDVHG----------VF---------------NDG 104 (145)
Q Consensus 71 G~Y~C~~~~~~-----------~--~~--------~~~~~g~~~~l~c~~----------~~---------------~~~ 104 (145)
|.|+|++.... . .| .....+....+.|.. +. ..+
T Consensus 92 G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~ 171 (313)
T 4fqp_A 92 GNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSG 171 (313)
T ss_dssp EEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTT
T ss_pred EEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeeccc
Confidence 99999884321 0 11 112346677888861 00 111
Q ss_pred -----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 -----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 -----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|..+..+|.|.|+|.|.|..+
T Consensus 172 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 201 (313)
T 4fqp_A 172 TVTVTSLWILVPSSQVDGKNVTCKVEHESF 201 (313)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTS
T ss_pred ccccceeeeecccccccCeeEEEEEEccCc
Confidence 2478888889999999999999876
No 176
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.27 E-value=1.5e-11 Score=91.61 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=82.6
Q ss_pred hhccceeeEEeecC-CCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 9 SIFQMLSVGDFADD-EDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g-~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
..+.++.+.|-+.| .|.+.+.|+|++... ..... +... ...+++|.|.+++.+|+|.|+|.+.+...
T Consensus 19 ~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~-~~~~~-~~~~-----~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~ 91 (395)
T 1bih_A 19 RENNPTVLECIIEGNDQGVKYSWKKDGKSY-NWQEH-NAAL-----RKDEGSLVFLRPQASDEGHYQCFAETPAGVASSR 91 (395)
T ss_dssp ETTSCEEECCCEESCCSSCEEEEEESSSBC-CTTTT-TEEE-----CTTSCCEEESSCCGGGCEEEEEEEEETTEEEECC
T ss_pred eCCCEEEEEEEEecCCCCceEEEEECCcCc-ccccc-eEEE-----ecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeE
Confidence 45677888898887 899999999988542 22211 2222 13478999999999999999999965320
Q ss_pred ----------CC------CCCCCCcEEEEEEeE----------Ee---------------------cCCcEEEEcccCCC
Q psy534 83 ----------SP------NSHKNGTWFHLDVHG----------VF---------------------NDGTELRISNIRSQ 115 (145)
Q Consensus 83 ----------~~------~~~~~g~~~~l~c~~----------~~---------------------~~~~~L~i~~v~~~ 115 (145)
.+ .....|+.+.|.|.. +. .....|.|.+++.+
T Consensus 92 ~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 171 (395)
T 1bih_A 92 VISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKE 171 (395)
T ss_dssp CEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGG
T ss_pred EEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeec
Confidence 11 113468999999971 00 11236999999999
Q ss_pred CCe---eeEEEEecCCC
Q psy534 116 DIG---DYTCLATHVLY 129 (145)
Q Consensus 116 d~G---~Y~C~a~n~~g 129 (145)
|+| .|+|.|.|..|
T Consensus 172 d~G~~~~Y~C~a~n~~~ 188 (395)
T 1bih_A 172 DVSDIYKYVCTAKNAAV 188 (395)
T ss_dssp GCCSSEEEEEEEECTTC
T ss_pred cCCCceEEEEEEEeccc
Confidence 999 99999999988
No 177
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.27 E-value=6.5e-12 Score=92.22 Aligned_cols=110 Identities=19% Similarity=0.198 Sum_probs=78.5
Q ss_pred hhccceeeEEeecC---------CCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCE-EEEEEEE
Q psy534 9 SIFQMLSVGDFADD---------EDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQG-WYECKVV 78 (145)
Q Consensus 9 ~~~~~~~~~~w~~g---------~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G-~Y~C~~~ 78 (145)
..+.++.+.|-+.+ +|.+.+.|||++..... ..|. ..+++|.|.+++.+|+| .|+|.+.
T Consensus 42 ~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~---~~~~--------~~~~~L~i~~v~~~D~Gs~Y~C~a~ 110 (329)
T 3oq3_B 42 ALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRP---LNRR--------VKNGDLWIANYTSNDSHRRYLCTVT 110 (329)
T ss_dssp CTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEE---CSTT--------EETTEEEESSCCGGGGGCCEEEEEE
T ss_pred ECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccc---cCce--------eecceEEEcCCChHhCCCcEEEEEE
Confidence 45667777787765 36689999999854211 1221 12789999999999999 9999996
Q ss_pred Eec-------------CCCC--------CCCCCcEEEEEEeE----------E------e--------cCCcEEEEcccC
Q psy534 79 FLN-------------RSPN--------SHKNGTWFHLDVHG----------V------F--------NDGTELRISNIR 113 (145)
Q Consensus 79 ~~~-------------~~~~--------~~~~g~~~~l~c~~----------~------~--------~~~~~L~i~~v~ 113 (145)
+.. .++. ....|+.+.|.|.. + . ..+..|.|.+++
T Consensus 111 n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~ 190 (329)
T 3oq3_B 111 TKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPE 190 (329)
T ss_dssp CTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCC
T ss_pred eCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecC
Confidence 532 1111 12348899999961 0 0 113589999999
Q ss_pred CCCCeeeEEEEecC--CC
Q psy534 114 SQDIGDYTCLATHV--LY 129 (145)
Q Consensus 114 ~~d~G~Y~C~a~n~--~g 129 (145)
.+|+|.|+|.|.|. .|
T Consensus 191 ~~D~G~Y~C~a~n~~~~g 208 (329)
T 3oq3_B 191 LEDSGRYDCYVHYDDVRI 208 (329)
T ss_dssp GGGCEEEEEEEEECCTTS
T ss_pred hhhCEEEEEEEEecccCC
Confidence 99999999999997 54
No 178
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.27 E-value=6e-12 Score=95.18 Aligned_cols=119 Identities=16% Similarity=0.127 Sum_probs=82.4
Q ss_pred hhhccceeeEEeecCCCc----cEEEEecCC-CCcc----------cccccceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 8 KSIFQMLSVGDFADDEDI----PVYIWYDSY-PTHE----------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~----p~~~w~k~~-~~~~----------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
...+.++.+.|.+.+.|. +.+.||+++ +... ...+.+|+.+.. ..+..+|.|.+++.+|+|.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~ 89 (438)
T 1qgc_4 13 VSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSG---SRTDFTLTIDPVEADDVAT 89 (438)
T ss_dssp ECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEE---ETTEEEEEESSCCGGGCEE
T ss_pred eeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEc---cCCcEEEEeCCCcCcCCee
Confidence 456778899999988886 489999864 1110 123456665532 1346789999999999999
Q ss_pred EEEEEEEecC----------------CCCC--------CCCCcEEEEEEeE-----------Eec------C--------
Q psy534 73 YECKVVFLNR----------------SPNS--------HKNGTWFHLDVHG-----------VFN------D-------- 103 (145)
Q Consensus 73 Y~C~~~~~~~----------------~~~~--------~~~g~~~~l~c~~-----------~~~------~-------- 103 (145)
|+|.+.+... +|.. ...|..+.|.|.. +.. .
T Consensus 90 Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 169 (438)
T 1qgc_4 90 YYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTD 169 (438)
T ss_dssp EEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEEC
T ss_pred EEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceecccc
Confidence 9999965320 1110 0126789999981 000 0
Q ss_pred -----C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 -----G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 -----~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|.+++.+|+|.|+|.|.|..+
T Consensus 170 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 205 (438)
T 1qgc_4 170 QDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 205 (438)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred ccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEeccc
Confidence 1 2688999999999999999999987
No 179
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.27 E-value=3.3e-11 Score=87.02 Aligned_cols=114 Identities=15% Similarity=0.180 Sum_probs=79.0
Q ss_pred hccceeeEEeec-CCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-------
Q psy534 10 IFQMLSVGDFAD-DEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------- 81 (145)
Q Consensus 10 ~~~~~~~~~w~~-g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------- 81 (145)
.+..+.+.|... |.|.|.+.|+|++... . ...|+.+... ....+|.|.+++.+|+|.|+|.+.+..
T Consensus 15 eg~~v~l~~~~~~~~p~~~v~W~k~~~~i-~--~~~~~~~~~~---~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~ 88 (312)
T 2y23_A 15 DDGVISLNFECDKMTPKSEFSWSKDYVST-E--DSPRLEVESK---GNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYL 88 (312)
T ss_dssp TTCCEEEEEECSSCCTTCCEEEEETTEEC-T--TCTTEEEEEE---TTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEE
T ss_pred cCCeEEEEEEEeCCCCCcEEEEEECCEEC-C--CCCCEEEEEe---CCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEE
Confidence 455666777765 6899999999998542 2 1235544321 235799999999999999999995411
Q ss_pred --C--------------CCC---------CCCCCcEEEEEEeEE----------------ecC-----------C--cEE
Q psy534 82 --R--------------SPN---------SHKNGTWFHLDVHGV----------------FND-----------G--TEL 107 (145)
Q Consensus 82 --~--------------~~~---------~~~~g~~~~l~c~~~----------------~~~-----------~--~~L 107 (145)
+ .|. ....|+.+.|.|... ... + ..|
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L 168 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEM 168 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEE
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEE
Confidence 0 111 124588999999821 000 1 129
Q ss_pred EEcccCCCCCeeeEEEEecCCC
Q psy534 108 RISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 108 ~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|.+++.+|+|.|+|.|.|..+
T Consensus 169 ~i~~~~~~d~G~Y~C~~~~~~~ 190 (312)
T 2y23_A 169 FMEKLQDEDEGTYTFQLQDGKA 190 (312)
T ss_dssp EESCCCGGGCEEEEEEEESSSC
T ss_pred EEccCCcccCEeEEEEEEeCCc
Confidence 9999999999999999988655
No 180
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.27 E-value=1.2e-11 Score=89.74 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=49.5
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---Cc-------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---TH-------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~-------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+..+.+-|.+.+.+ .+.+.||++.. .. ....+.+|+.+..+ ......+|.|.+++.+|
T Consensus 34 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 112 (291)
T 2gki_A 34 VKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSD-KSSSTAYMELSSLTSED 112 (291)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEE-GGGTEEEEEECSCCGGG
T ss_pred ecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEe-CCCCEEEEEECcCCHHH
Confidence 45677788889888776 57899998641 10 01234567665321 11246789999999999
Q ss_pred CEEEEEEEEEe
Q psy534 70 QGWYECKVVFL 80 (145)
Q Consensus 70 ~G~Y~C~~~~~ 80 (145)
+|.|+|.+.+.
T Consensus 113 sG~Y~C~~~~~ 123 (291)
T 2gki_A 113 SAVYYCARGAY 123 (291)
T ss_dssp CEEEEEEEECG
T ss_pred CEEEEEEEecc
Confidence 99999998653
No 181
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.26 E-value=2.1e-11 Score=87.20 Aligned_cols=70 Identities=17% Similarity=0.168 Sum_probs=49.7
Q ss_pred HhhhccceeeEEeecCCC-----ccEEEEecCCC-C--c-c-------cccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 7 VKSIFQMLSVGDFADDED-----IPVYIWYDSYP-T--H-E-------AEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p-----~p~~~w~k~~~-~--~-~-------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
....+..+.+-|.+.+.+ .+.+.||++.. . . + ...+.+|+.+.. .....+|.|.+++.+|+
T Consensus 26 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~Ds 102 (268)
T 1x9q_A 26 PVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSG---SGTDFTLKINRVEAEDL 102 (268)
T ss_dssp CCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE---ETTEEEEEESSCCGGGC
T ss_pred EecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEc---CCCEEEEEECCCChhHC
Confidence 356778889999998876 48899998641 1 0 0 112346666532 13467899999999999
Q ss_pred EEEEEEEEE
Q psy534 71 GWYECKVVF 79 (145)
Q Consensus 71 G~Y~C~~~~ 79 (145)
|.|+|.+.+
T Consensus 103 G~Y~C~~~~ 111 (268)
T 1x9q_A 103 GVYFCSQST 111 (268)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEEec
Confidence 999999954
No 182
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.26 E-value=4.3e-11 Score=91.06 Aligned_cols=121 Identities=13% Similarity=0.142 Sum_probs=83.0
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC-Cc---------------ccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP-TH---------------EAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~~---------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+..+..+.+-|.+.|.+ .+.+.||++.. .. ....+.+|+.+..+ ...++++|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~ 89 (444)
T 1igt_B 11 LVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRD-NAKNTLYLQMSRLKSE 89 (444)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEE-TTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEe-CCCCeEEEEECCCCHH
Confidence 345677888889888764 57789987531 10 11235678876532 1345789999999999
Q ss_pred CCEEEEEEEEEec-------------C------CC--------CCCCCCcEEEEEEeEE-----------ecC-------
Q psy534 69 DQGWYECKVVFLN-------------R------SP--------NSHKNGTWFHLDVHGV-----------FND------- 103 (145)
Q Consensus 69 D~G~Y~C~~~~~~-------------~------~~--------~~~~~g~~~~l~c~~~-----------~~~------- 103 (145)
|+|.|+|.+.+.. + +| .....|+.+.|.|... ..+
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~ 169 (444)
T 1igt_B 90 DTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVH 169 (444)
T ss_dssp GCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred HCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeE
Confidence 9999999996521 0 11 0123588999999820 000
Q ss_pred --------C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 --------G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 --------~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|.++..+| |.|+|.|.|..|
T Consensus 170 ~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~ 207 (444)
T 1igt_B 170 TFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 207 (444)
T ss_dssp ECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTT
T ss_pred ecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCC
Confidence 1 247788888889 999999999987
No 183
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.26 E-value=3.6e-12 Score=92.54 Aligned_cols=116 Identities=21% Similarity=0.190 Sum_probs=83.0
Q ss_pred HhhhccceeeEEeecCCC-ccEEEEecCCCCc-ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec---
Q psy534 7 VKSIFQMLSVGDFADDED-IPVYIWYDSYPTH-EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN--- 81 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p-~p~~~w~k~~~~~-~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~--- 81 (145)
....+.++.+.|-+.|.| .+.+.|+|++... +......|+.. .+.+|.|.+++.+|+|.|+|.+.+..
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 88 (315)
T 1itb_B 16 VSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQ-------HKEKLWFVPAKVEDSGHYYCVVRNSSYCL 88 (315)
T ss_dssp EEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEE-------CSSBEECTTCCGGGCSCCEECCCSSSCCC
T ss_pred EEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEec-------cCCeEEECCCChhhCEEEEEEEeCCceEE
Confidence 345667788889888876 8899999997531 22233445443 25689999999999999999995432
Q ss_pred ----------CCCC-----------CCCCCcEEEEEEeE---------------E--------------ecCCcEEEEcc
Q psy534 82 ----------RSPN-----------SHKNGTWFHLDVHG---------------V--------------FNDGTELRISN 111 (145)
Q Consensus 82 ----------~~~~-----------~~~~g~~~~l~c~~---------------~--------------~~~~~~L~i~~ 111 (145)
.+|. ....|+.+.|.|.. + ...+..|.|.+
T Consensus 89 ~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~ 168 (315)
T 1itb_B 89 RIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMN 168 (315)
T ss_dssp CEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESS
T ss_pred EEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEe
Confidence 1111 02248899999941 0 01234899999
Q ss_pred cCCCCCeeeEEEEe-cCCC
Q psy534 112 IRSQDIGDYTCLAT-HVLY 129 (145)
Q Consensus 112 v~~~d~G~Y~C~a~-n~~g 129 (145)
++.+|+|.|+|.|. |..|
T Consensus 169 v~~~d~G~Y~C~a~~n~~g 187 (315)
T 1itb_B 169 VAEKHRGNYTCHASYTYLG 187 (315)
T ss_dssp CCGGGCEEEEEEEEEEETT
T ss_pred ceehhCcEEEEEEEcCCCC
Confidence 99999999999999 7777
No 184
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.25 E-value=2.5e-11 Score=88.79 Aligned_cols=119 Identities=13% Similarity=0.126 Sum_probs=70.2
Q ss_pred hhccceeeEEeecCCCcc--EEEEecCCCCcccccccceEEEecCCCCC-CeeeEEEcccCCCCCEEEEEEEEEecC---
Q psy534 9 SIFQMLSVGDFADDEDIP--VYIWYDSYPTHEAEEYKGRISRVDKESPF-GMASLNLTKIRESDQGWYECKVVFLNR--- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p--~~~w~k~~~~~~~~~~~~R~~~~~~~~~~-~~~sL~I~~v~~~D~G~Y~C~~~~~~~--- 82 (145)
..+.++.+.|.+.|.|.| .+.|++++..... .. .+......+... -...|.|.....+|.|.|.|.+.+...
T Consensus 130 ~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~-~~-~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~ 207 (327)
T 2wng_A 130 TPQHTVSFTCESHGFSPRDITLKWFKNGNELSD-FQ-TNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGD 207 (327)
T ss_dssp CTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC-EE-EEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSC
T ss_pred CCCCEEEEEEEEeCccCCCcEEEEEECCEEccc-cc-cccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCC
Confidence 456678889999987665 8999998754211 11 111110000000 144688887777788999999976311
Q ss_pred --------------CC------CCCCCCcEEEEEEeEE-----------e-----------------cCC-----cEEEE
Q psy534 83 --------------SP------NSHKNGTWFHLDVHGV-----------F-----------------NDG-----TELRI 109 (145)
Q Consensus 83 --------------~~------~~~~~g~~~~l~c~~~-----------~-----------------~~~-----~~L~i 109 (145)
+| .....|..+.|.|... . .++ ..|.|
T Consensus 208 ~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i 287 (327)
T 2wng_A 208 PLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLV 287 (327)
T ss_dssp CEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC
T ss_pred cccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEE
Confidence 11 1134688999999810 0 111 23677
Q ss_pred cccCCCCCeeeEEEEecCCC
Q psy534 110 SNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 110 ~~v~~~d~G~Y~C~a~n~~g 129 (145)
..+..+|+|.|+|.|.|..|
T Consensus 288 ~~~~~~d~G~Y~C~a~N~~~ 307 (327)
T 2wng_A 288 NVSAHRDDVKLTCQVEHDGQ 307 (327)
T ss_dssp -------CCEEEEEEEETTC
T ss_pred ccccccCCCEEEEEEEeCCC
Confidence 78888999999999999998
No 185
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.25 E-value=1.2e-10 Score=83.96 Aligned_cols=114 Identities=13% Similarity=0.113 Sum_probs=78.6
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcc-cCCCCCEEEEEEEEEecC------
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTK-IRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~-v~~~D~G~Y~C~~~~~~~------ 82 (145)
.+.++.+.|.+.|.|.|.+.|++++... .. ..+..+.. .....+|.|.+ ++.+|+|.|+|.+.+...
T Consensus 118 ~g~~~~l~C~~~g~p~p~i~W~~~~~~~-~~--~~~~~~~~---~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~ 191 (305)
T 2nzi_A 118 RGEVVSIKIPFSGKPDPVITWQKGQDLI-DN--NGHYQVIV---TRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTV 191 (305)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEESSSBC-CS--SSSCEEEE---CSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEEEECCCCCCEEEEEECCEEC-CC--CCcEEEEE---cCCceEEEEecCCccCccEEEEEEEEeCCCceeeEE
Confidence 4667888999999999999999987542 21 22333321 12478899999 999999999999965320
Q ss_pred ------CCCC-------CCCCcEEEEEEe--------------E-------------EecCCcEEEEcccCCCCCeeeEE
Q psy534 83 ------SPNS-------HKNGTWFHLDVH--------------G-------------VFNDGTELRISNIRSQDIGDYTC 122 (145)
Q Consensus 83 ------~~~~-------~~~g~~~~l~c~--------------~-------------~~~~~~~L~i~~v~~~d~G~Y~C 122 (145)
.|.+ ...+..+.|.|. . .......|.|.++...+.|.|+|
T Consensus 192 ~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~ 271 (305)
T 2nzi_A 192 ELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFRV 271 (305)
T ss_dssp EEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEESSSEEEECSCCSSCEEEEEE
T ss_pred EEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccccCceEEecCCCCCCeEEEEE
Confidence 1111 112344444443 0 01123479999999999999999
Q ss_pred EEecCCC
Q psy534 123 LATHVLY 129 (145)
Q Consensus 123 ~a~n~~g 129 (145)
.|.|..|
T Consensus 272 ~A~N~~G 278 (305)
T 2nzi_A 272 IAENKFG 278 (305)
T ss_dssp EEEETTE
T ss_pred EEEeCCc
Confidence 9999998
No 186
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.25 E-value=3.6e-11 Score=86.23 Aligned_cols=121 Identities=12% Similarity=0.144 Sum_probs=80.8
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC--Cc--------------ccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP--TH--------------EAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~--~~--------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+..+..+.+.|.+.+.+ .+.+.||++.. .. ....+.+|+.+..+. ..++.+|.|.+++.+
T Consensus 17 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~sL~I~~v~~~ 95 (261)
T 2xqy_G 17 LVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDK-SSSTVYIQLSSLTSE 95 (261)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEG-GGTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecC-CCCEEEEEEcCCCcc
Confidence 345677888899988776 67899998641 10 012346788764321 234789999999999
Q ss_pred CCEEEEEEEEEec-------------C------CCC--------CCCCCcEEEEEEeEE-----------ecC-------
Q psy534 69 DQGWYECKVVFLN-------------R------SPN--------SHKNGTWFHLDVHGV-----------FND------- 103 (145)
Q Consensus 69 D~G~Y~C~~~~~~-------------~------~~~--------~~~~g~~~~l~c~~~-----------~~~------- 103 (145)
|+|.|+|.+.+.. + +|. ....|..+.|.|... ..+
T Consensus 96 DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~ 175 (261)
T 2xqy_G 96 DSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVH 175 (261)
T ss_dssp GCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEE
T ss_pred cCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceE
Confidence 9999999996520 0 010 112488999999810 000
Q ss_pred -------------CcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 -------------GTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 -------------~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
...|.|..+..+| |.|+|.|.|...
T Consensus 176 ~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~ 213 (261)
T 2xqy_G 176 TFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 213 (261)
T ss_dssp ECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred ecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCC
Confidence 1247787777777 999999999754
No 187
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.25 E-value=1.8e-11 Score=94.85 Aligned_cols=122 Identities=17% Similarity=0.134 Sum_probs=83.5
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCE-EEEEEEEEecC-----
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQG-WYECKVVFLNR----- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G-~Y~C~~~~~~~----- 82 (145)
..+.++.+.|-+.|.|.+.+.||+.++..+.. ..|+.+. .+.+|.|.+++.+|+| .|+|.+.+...
T Consensus 127 ~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~--~~~~~~~------~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~ 198 (524)
T 2ec8_A 127 KEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPK--DLRFIPD------PKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSE 198 (524)
T ss_dssp ETTSCEEECCCBSCCCCSCEEEECSSSCCCCS--SCEEEEE------TTTEEEEESCCGGGTTCEEEEEEC----CCCCC
T ss_pred EcCCeEEEECcCCCCccceEEEEccCCcCcCC--CCceeEC------CCccEEEeccchhhCCceEEEEEEECCceEEEE
Confidence 34567788888888777999999843332321 2344442 2668999999999999 99999954310
Q ss_pred ------------CCC--------CCCCCcEEEEEEeEE----------e----------------------cCCcEEEEc
Q psy534 83 ------------SPN--------SHKNGTWFHLDVHGV----------F----------------------NDGTELRIS 110 (145)
Q Consensus 83 ------------~~~--------~~~~g~~~~l~c~~~----------~----------------------~~~~~L~i~ 110 (145)
+|. ....|+.+.|.|... . .....|.|.
T Consensus 199 ~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 278 (524)
T 2ec8_A 199 KFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTIS 278 (524)
T ss_dssp CEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEES
T ss_pred EEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEEC
Confidence 110 023488999999810 0 012468999
Q ss_pred ccCCCCCeeeEEEEecCCC-----CcEEEEeCe
Q psy534 111 NIRSQDIGDYTCLATHVLY-----PDLLVVLGS 138 (145)
Q Consensus 111 ~v~~~d~G~Y~C~a~n~~g-----~~~~v~~~~ 138 (145)
+++.+|+|.|+|.|.|..| ..+.|....
T Consensus 279 ~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p 311 (524)
T 2ec8_A 279 SARVNDSGVFMCYANNTFGSANVTTTLEVVDKG 311 (524)
T ss_dssp SCCTTTCEEEEEEEECSSCEEEEEEEEEEESSC
T ss_pred CCCHHHCEEEEEEEEecCCceEEEEEEEEeccC
Confidence 9999999999999999998 445554433
No 188
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.24 E-value=2.3e-11 Score=85.36 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=48.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC--------------CcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP--------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~--------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
+..+..+.+-|-+.+ +.+.+.|||... ......+.+|+.+..+ ..++++|.|.+++.+|+|.|
T Consensus 14 v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~sL~I~~v~~~D~G~Y 90 (240)
T 3q5y_A 14 KEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQF--DDYHSEMNMSALELEDSAMY 90 (240)
T ss_dssp EETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEEC--TTSCEEEEECSCCGGGCEEE
T ss_pred ecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeC--CCCEEEEEECcCChhHCEEE
Confidence 455677788887765 677888988321 1122335567776542 24578999999999999999
Q ss_pred EEEEE
Q psy534 74 ECKVV 78 (145)
Q Consensus 74 ~C~~~ 78 (145)
+|.+.
T Consensus 91 ~C~~~ 95 (240)
T 3q5y_A 91 FCASS 95 (240)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99996
No 189
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.24 E-value=7.2e-13 Score=106.58 Aligned_cols=119 Identities=23% Similarity=0.286 Sum_probs=0.0
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEE----------------EecCCCCCCeeeEEEcccCCCCCEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRIS----------------RVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~----------------~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
..+.++.+.|.+.|.|.+.+.|++++...... ..++.. .+. .......+|.|.+++.+|+|.
T Consensus 562 ~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~ 639 (772)
T 3v2a_R 562 TEQESVSLWCTADRSTFENLTWYKLGPQPLPI-HVGELPTPVCKNLDTLWKLNATMFS-NSTNDILIMELKNASLQDQGD 639 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCceEEEEeccCCCCCCcEEEEcCCccccc-ccCcccccccccccceeeccceeee-cCCCceEEEEECCCCccCCcE
Confidence 35667778898889999999999987532211 111110 000 001123459999999999999
Q ss_pred EEEEEEEecC----------------CCC--------CCCCCcEEEEEEeE---------E---------------ecCC
Q psy534 73 YECKVVFLNR----------------SPN--------SHKNGTWFHLDVHG---------V---------------FNDG 104 (145)
Q Consensus 73 Y~C~~~~~~~----------------~~~--------~~~~g~~~~l~c~~---------~---------------~~~~ 104 (145)
|.|.+.+... +|. ....|+.+.|.|.. + ...+
T Consensus 640 Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~ 719 (772)
T 3v2a_R 640 YVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGN 719 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCC
Confidence 9999976210 110 12348899999981 0 0113
Q ss_pred cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.+++.+|+|.|+|.|.|.+|
T Consensus 720 ~~L~I~~v~~~D~G~Y~C~a~N~~G 744 (772)
T 3v2a_R 720 RNLTIRRVRKEDEGLYTCQACSVLG 744 (772)
T ss_dssp -------------------------
T ss_pred cEEEECcCCHHHCEEEEEEEEeCCc
Confidence 5799999999999999999999998
No 190
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.22 E-value=2.6e-11 Score=86.18 Aligned_cols=120 Identities=13% Similarity=0.131 Sum_probs=77.4
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCCC----------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYPT----------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~~----------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. +.+.+.||+.... .....+++|+.+..+ ...++.+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 90 (253)
T 3liz_H 12 VQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRD-NAKNTLFLQMSSLKSED 90 (253)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEE-GGGTEEEEEECSCCGGG
T ss_pred ECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEe-CCCCEEEEEECCCChhh
Confidence 4456677777777652 3456777764310 112346678877532 12357789999999999
Q ss_pred CEEEEEEEEEec--------------C------CC--------CCCCCCcEEEEEEeEE-----------ecC-------
Q psy534 70 QGWYECKVVFLN--------------R------SP--------NSHKNGTWFHLDVHGV-----------FND------- 103 (145)
Q Consensus 70 ~G~Y~C~~~~~~--------------~------~~--------~~~~~g~~~~l~c~~~-----------~~~------- 103 (145)
+|.|+|.+.+.. + .| .....|..+.|.|... ..+
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~ 170 (253)
T 3liz_H 91 TAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 170 (253)
T ss_dssp CEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred CEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceE
Confidence 999999986430 0 11 0122488999999810 000
Q ss_pred --------C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 --------G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 --------~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|.....+| |.|+|.|+|..+
T Consensus 171 ~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~ 208 (253)
T 3liz_H 171 TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPAS 208 (253)
T ss_dssp ECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGG
T ss_pred eCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCC
Confidence 1 257788888888 999999999987
No 191
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.21 E-value=1.4e-10 Score=81.55 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=49.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCC--------------CCccccccc-ceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSY--------------PTHEAEEYK-GRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~--------------~~~~~~~~~-~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
+..+..+.+-| ..+.+.+.+.|||.. .......+. +|+.+..+ ..++.+|.|.+++.+|+|.
T Consensus 14 v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~sL~I~~v~~~D~G~ 90 (245)
T 4ei6_B 14 IDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERP--DGSYFTLKIQPTALEDSAV 90 (245)
T ss_dssp EETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECC--TTSCEEEEECSCCGGGCEE
T ss_pred ecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEec--cCceEEEEECCCCHhHCEE
Confidence 45677888888 667788899998821 111122333 77776542 2457899999999999999
Q ss_pred EEEEEE
Q psy534 73 YECKVV 78 (145)
Q Consensus 73 Y~C~~~ 78 (145)
|+|.+.
T Consensus 91 Y~C~~~ 96 (245)
T 4ei6_B 91 YFCASS 96 (245)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999997
No 192
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.21 E-value=2.4e-11 Score=95.25 Aligned_cols=63 Identities=10% Similarity=-0.108 Sum_probs=47.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|-+.|.|.|.+.|+|++..... . .+. .....+|.|.+++.+|+|.|+|.|.+.
T Consensus 338 v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~-~--~~~-------~~~~~~L~I~~v~~~D~G~YtC~A~N~ 400 (527)
T 3qs9_E 338 IDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPC-E--QKG-------LDNGYSISKFCNHKHQPGEYIFHAEND 400 (527)
T ss_dssp CCTTCCCCEEEEEEEESCCEEEEEETTEEEEC-B--CCB-------CSSSSEEEEECCCTTCCSCEEEEEEET
T ss_pred EcCCCeEEEEEEEEecCCCEEEEEECCEECcC-C--ccc-------ccCCcEEEEecCCcccCEEEEEEEEeC
Confidence 34567788889999999999999999854211 1 111 123678999999999999999999764
No 193
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.20 E-value=7e-11 Score=90.29 Aligned_cols=121 Identities=17% Similarity=0.174 Sum_probs=82.9
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---Cc-------------ccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---TH-------------EAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~-------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+..+.++.+-|.+.+.+ .+.+.||++.. .. ....+.+|+.+..+ ...+.++|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~ 89 (457)
T 1hzh_H 11 VKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTAD-TSANTAYMELRSLRSA 89 (457)
T ss_dssp EECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEE-TTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEe-CCCCEEEEEECCCCcc
Confidence 345677888889888776 67899987531 10 11235678876532 2234689999999999
Q ss_pred CCEEEEEEEEEec----------------------C------CC--------CCCCCCcEEEEEEeEE-----------e
Q psy534 69 DQGWYECKVVFLN----------------------R------SP--------NSHKNGTWFHLDVHGV-----------F 101 (145)
Q Consensus 69 D~G~Y~C~~~~~~----------------------~------~~--------~~~~~g~~~~l~c~~~-----------~ 101 (145)
|+|.|+|.+.+.. + +| .....|+.+.|.|... .
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 169 (457)
T 1hzh_H 90 DTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN 169 (457)
T ss_dssp GCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEET
T ss_pred cCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEE
Confidence 9999999996431 0 11 0123588999999810 0
Q ss_pred ---------------cCCc------EEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 ---------------NDGT------ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ---------------~~~~------~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..+. .|.|.++..+| |.|+|.|.|..+
T Consensus 170 k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~ 217 (457)
T 1hzh_H 170 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 217 (457)
T ss_dssp TTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGG
T ss_pred eCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCC
Confidence 0111 58888998889 999999999876
No 194
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.20 E-value=9.3e-11 Score=83.60 Aligned_cols=69 Identities=12% Similarity=0.161 Sum_probs=47.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCC--CC------------ccccccc-ceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSY--PT------------HEAEEYK-GRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~--~~------------~~~~~~~-~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
+..+..+.+-|.+. .+.+.+.|||.. .. .....+. +|+.+..+ ..++++|.|.+++.+|+|.
T Consensus 38 v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~--~~~~~sL~I~~v~~~D~G~ 114 (268)
T 3pl6_D 38 TEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRP--EGSVSTLKIQRTERGDSAV 114 (268)
T ss_dssp EETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECT--TSSSEEEEECSCCGGGCEE
T ss_pred ecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEec--CCCEEEEEECCCCcccCEE
Confidence 34566677777765 466788888732 11 1122233 77777542 3458899999999999999
Q ss_pred EEEEEEE
Q psy534 73 YECKVVF 79 (145)
Q Consensus 73 Y~C~~~~ 79 (145)
|+|.+.+
T Consensus 115 Y~C~~~~ 121 (268)
T 3pl6_D 115 YLCATSA 121 (268)
T ss_dssp EEEEEES
T ss_pred EEEEEec
Confidence 9999974
No 195
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.20 E-value=5.1e-10 Score=78.56 Aligned_cols=122 Identities=13% Similarity=0.105 Sum_probs=78.0
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---Cc------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---TH------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
.+..+..+.+-|.+.+.+ .+.+.||+... .. ....+.+|+.+..+ ...++.+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~D 89 (232)
T 1dn0_B 11 LLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVD-TSKNQFSLKLSSVTAAD 89 (232)
T ss_dssp EECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEe-CCCCEEEEEECCCCccc
Confidence 345677888889887654 57788987531 10 11235678877532 12347799999999999
Q ss_pred CEEEEEEEE--Ee--------c------C-C-----CC--------CCCCC-cEEEEEEeE-----------Eec-CC--
Q psy534 70 QGWYECKVV--FL--------N------R-S-----PN--------SHKNG-TWFHLDVHG-----------VFN-DG-- 104 (145)
Q Consensus 70 ~G~Y~C~~~--~~--------~------~-~-----~~--------~~~~g-~~~~l~c~~-----------~~~-~~-- 104 (145)
+|.|+|.+. +. . + . |. ....| ..+.|.|.. +.. ++
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~ 169 (232)
T 1dn0_B 90 TAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSD 169 (232)
T ss_dssp CEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTSCE
T ss_pred CEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCc
Confidence 999999997 21 0 0 1 10 01246 889999981 111 21
Q ss_pred -------------------cEEEEcccCC--CCCeeeEEEEecCCC
Q psy534 105 -------------------TELRISNIRS--QDIGDYTCLATHVLY 129 (145)
Q Consensus 105 -------------------~~L~i~~v~~--~d~G~Y~C~a~n~~g 129 (145)
..|.|..... +|.|.|+|.|.|..+
T Consensus 170 l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~ 215 (232)
T 1dn0_B 170 ISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNG 215 (232)
T ss_dssp ECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTC
T ss_pred eeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCC
Confidence 1356666665 779999999999987
No 196
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.20 E-value=5.2e-11 Score=73.53 Aligned_cols=69 Identities=16% Similarity=0.159 Sum_probs=52.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|-+.|.|.|.+.|++++.. +...-..|+.+... ....+|.|.+++.+|+|.|.|.|.|.
T Consensus 17 v~~G~~~~l~C~~~g~P~p~v~W~k~g~~-i~~~~~~~~~~~~~---~~~~~L~I~~~~~~D~G~Y~C~a~N~ 85 (100)
T 3knb_A 17 IDEGKVLTVACAFTGEPTPEVTWSCGGRK-IHSQEQGRFHIENT---DDLTTLIIMDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp EETTSEEEEEEEEEEESCCEEEEEETTEE-CCTTGGGTEEEEEC---SSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred EeCCCeEEEEEEEEEecCCEEEEEECceE-eeeeccceeeeecc---cceEEEEEcCCCccCCEEEEEEEEEC
Confidence 34567888999999999999999999854 33333445655332 33678999999999999999999863
No 197
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.19 E-value=4.7e-11 Score=84.01 Aligned_cols=70 Identities=20% Similarity=0.240 Sum_probs=52.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC-------------CcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP-------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~-------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
+..+..+.+-|-+.+.+.+.+.||+... ......+.+|+.+..+ ..++.+|.|.+++.+|+|.|+
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~--~~~~~sL~I~~v~~~D~G~Y~ 90 (245)
T 3nfj_J 13 QPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRP--QDRQFILSSKKLLLSDSGFYL 90 (245)
T ss_dssp EETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEE--ETTEEEEEESSCCGGGCEEEE
T ss_pred ecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEec--CCCEEEEEECCCChhhCEEEE
Confidence 4567788889999888899999998321 0011345677776532 235789999999999999999
Q ss_pred EEEEE
Q psy534 75 CKVVF 79 (145)
Q Consensus 75 C~~~~ 79 (145)
|.+.+
T Consensus 91 C~~~~ 95 (245)
T 3nfj_J 91 CAWSV 95 (245)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 99976
No 198
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.19 E-value=4.3e-11 Score=90.90 Aligned_cols=121 Identities=12% Similarity=0.141 Sum_probs=81.7
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC--Cc--------------ccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP--TH--------------EAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~--~~--------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
....+.++.+.|.+.|.+ .+.+.||++.. .. ....+.+|+.+..+ ...+.++|.|.+++.+
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~ 88 (434)
T 1igy_B 10 LARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRD-RSSNTANIHLSSLTSD 88 (434)
T ss_dssp EECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBC-GGGCBBCEEECSBCGG
T ss_pred EecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEE-CCCCEEEEEECCCChH
Confidence 345677888888888764 67788987631 10 11235678776432 1233678999999999
Q ss_pred CCEEEEEEEEEec----------C------CC--------CCCCCCcEEEEEEeEE--------e---cCC---------
Q psy534 69 DQGWYECKVVFLN----------R------SP--------NSHKNGTWFHLDVHGV--------F---NDG--------- 104 (145)
Q Consensus 69 D~G~Y~C~~~~~~----------~------~~--------~~~~~g~~~~l~c~~~--------~---~~~--------- 104 (145)
|+|.|+|.+.+.. + +| .....|..+.|.|... + .++
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~ 168 (434)
T 1igy_B 89 DSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFP 168 (434)
T ss_dssp GCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECC
T ss_pred HCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecC
Confidence 9999999985421 0 11 1123689999999821 0 011
Q ss_pred -----------cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 -----------TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 -----------~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.++..+| |.|+|.|.|..|
T Consensus 169 ~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~ 203 (434)
T 1igy_B 169 AVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPAS 203 (434)
T ss_dssp CEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTT
T ss_pred ceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCC
Confidence 247888888888 999999999988
No 199
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.18 E-value=1.2e-10 Score=82.23 Aligned_cols=121 Identities=16% Similarity=0.192 Sum_probs=78.7
Q ss_pred HhhhccceeeEEeecCCC----ccEEEEecCCCC---------------------cccccccceEEEecCCCCCCeeeEE
Q psy534 7 VKSIFQMLSVGDFADDED----IPVYIWYDSYPT---------------------HEAEEYKGRISRVDKESPFGMASLN 61 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p----~p~~~w~k~~~~---------------------~~~~~~~~R~~~~~~~~~~~~~sL~ 61 (145)
.+..+..+.+-|.+.+.+ ...+.||+.... .....+++|+.+..+ ......+|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~ 89 (239)
T 3tv3_H 11 LVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALD-TPKNLVFLK 89 (239)
T ss_dssp EECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEE-GGGTEEEEE
T ss_pred EEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEE-CCCCEEEEE
Confidence 355677788888877654 347888874310 011245678876532 123467899
Q ss_pred EcccCCCCCEEEEEEEEEe-------------c----------C------CC--------CCCCCCcEEEEEEeE-----
Q psy534 62 LTKIRESDQGWYECKVVFL-------------N----------R------SP--------NSHKNGTWFHLDVHG----- 99 (145)
Q Consensus 62 I~~v~~~D~G~Y~C~~~~~-------------~----------~------~~--------~~~~~g~~~~l~c~~----- 99 (145)
|.+++.+|+|.|+|.+.+. . + .| .....|..+.|.|..
T Consensus 90 I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p 169 (239)
T 3tv3_H 90 LNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 169 (239)
T ss_dssp ECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEEEBS
T ss_pred ECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEeeEeC
Confidence 9999999999999998532 0 0 01 012348899999981
Q ss_pred ------Ee---------------c-CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 100 ------VF---------------N-DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 100 ------~~---------------~-~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+. . ++ ..|.|.....+| |.|+|.|+|..+
T Consensus 170 ~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 225 (239)
T 3tv3_H 170 EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 225 (239)
T ss_dssp SCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGG
T ss_pred CCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCC
Confidence 00 1 11 247788888888 999999999875
No 200
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.17 E-value=7.9e-11 Score=92.40 Aligned_cols=65 Identities=15% Similarity=0.153 Sum_probs=49.8
Q ss_pred hhccceeeEEee-cCCCccEEEEecCCCCcc---------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 9 SIFQMLSVGDFA-DDEDIPVYIWYDSYPTHE---------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 9 ~~~~~~~~~~w~-~g~p~p~~~w~k~~~~~~---------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
..+.++.+.|-+ .+.|.+.+.|++++.... ...+.+|..+. .+++|.|.+++.+|+|.|+|++.
T Consensus 379 ~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~------~~~~L~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 379 RIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVL------PNGSLFLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp ETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEEC------TTSCEEESSCCGGGCEEEEEEEE
T ss_pred ecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEc------CCceEEEeccccccCeEEEEEEE
Confidence 456778888988 688999999999864210 12456676662 36799999999999999999995
Q ss_pred E
Q psy534 79 F 79 (145)
Q Consensus 79 ~ 79 (145)
+
T Consensus 453 n 453 (581)
T 3o3u_N 453 N 453 (581)
T ss_dssp C
T ss_pred c
Confidence 4
No 201
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.17 E-value=1.7e-10 Score=79.98 Aligned_cols=72 Identities=17% Similarity=0.132 Sum_probs=51.5
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---Cc------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---TH------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
.+..+..+.+-|.+.+.+ .+.+.||++.. .. ....+.+|+.+..+ ...++.+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~D 89 (215)
T 1c5d_H 11 LVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRD-TSKSQVFLKMNSLQTED 89 (215)
T ss_dssp EECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEE-TTTTEEEEEESSCCGGG
T ss_pred eecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEee-CCCceEEEEECCCCccc
Confidence 345677888999988764 57899988631 10 11235678887532 12346899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 90 ~G~Y~C~~~~ 99 (215)
T 1c5d_H 90 TAIYFCTRED 99 (215)
T ss_dssp CEEEEEEECC
T ss_pred CEEEEEEEec
Confidence 9999999965
No 202
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.16 E-value=1.5e-10 Score=82.77 Aligned_cols=113 Identities=13% Similarity=0.052 Sum_probs=76.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|-+.|. +.|+++..... +... .....+|.|.+++.+|+|.|+|.+.+..
T Consensus 16 v~~G~~v~L~C~~~~~----v~W~~~~~~~~------~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 80 (289)
T 3ejj_X 16 VEPGETVTLRCVSNGS----VEWDGPISPYW------TLDP-----ESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTT 80 (289)
T ss_dssp ECTTCCEEEEEECSSC----CEEECSCSSSS------EECC-----CSSCCEEEESSCCGGGCEEEEEECCC-----CEE
T ss_pred ECCCCCEEEEEEeCCc----EEEccCCCceE------EEec-----cCCccEEEEeeeccccCEEEEEEEeccCCcceeE
Confidence 3457778888888773 89997764311 1111 2347889999999999999999974321
Q ss_pred ----C--CCCC---------CCCCcEEEEEEeE----------E---------------ecCCcEEEEcccCCCCCeeeE
Q psy534 82 ----R--SPNS---------HKNGTWFHLDVHG----------V---------------FNDGTELRISNIRSQDIGDYT 121 (145)
Q Consensus 82 ----~--~~~~---------~~~g~~~~l~c~~----------~---------------~~~~~~L~i~~v~~~d~G~Y~ 121 (145)
+ ++.. ...|+.+.|.|.. + ...+..|.|.+++.+|+|.|+
T Consensus 81 ~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 160 (289)
T 3ejj_X 81 IHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYV 160 (289)
T ss_dssp EEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEE
T ss_pred EEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEE
Confidence 1 1111 2348899999981 1 112347999999999999999
Q ss_pred EEEec-CCC-----CcEEEE
Q psy534 122 CLATH-VLY-----PDLLVV 135 (145)
Q Consensus 122 C~a~n-~~g-----~~~~v~ 135 (145)
|.|.| ..+ ..+.|.
T Consensus 161 C~a~~~~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 161 CKTMVNGRESTSTGIWLKVN 180 (289)
T ss_dssp EEEEETTEEEECCCEEEEEE
T ss_pred EEEEeCCCccccccEEEEEE
Confidence 99994 333 455554
No 203
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.15 E-value=1.9e-10 Score=80.59 Aligned_cols=120 Identities=17% Similarity=0.215 Sum_probs=75.9
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC----------------CcccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP----------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~----------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. +...+.||+... ......+++|+.+..+ ...++.+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 90 (230)
T 3n9g_H 12 RKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRD-TSTSTVYMELSSLRSED 90 (230)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEec-CCCCEEEEEECCCChhh
Confidence 3455566666666531 234566665321 0112346678887543 23457889999999999
Q ss_pred CEEEEEEEEEec------------------C------CC--------CCCCCCcEEEEEEeEE--------e--------
Q psy534 70 QGWYECKVVFLN------------------R------SP--------NSHKNGTWFHLDVHGV--------F-------- 101 (145)
Q Consensus 70 ~G~Y~C~~~~~~------------------~------~~--------~~~~~g~~~~l~c~~~--------~-------- 101 (145)
+|.|+|.+.... + +| .....|..+.|.|... +
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~~~~ 170 (230)
T 3n9g_H 91 TAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 170 (230)
T ss_dssp CEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEECCcccC
Confidence 999999986421 0 11 0123588999999810 0
Q ss_pred ----------c-CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 ----------N-DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ----------~-~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
. ++ ..|.|.....+| |.|+|.|+|..+
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 213 (230)
T 3n9g_H 171 SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 213 (230)
T ss_dssp TTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGG
T ss_pred CCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCC
Confidence 0 11 257788888888 999999999875
No 204
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.15 E-value=7.6e-11 Score=89.98 Aligned_cols=115 Identities=12% Similarity=-0.014 Sum_probs=71.2
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR----- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~----- 82 (145)
...+..+.+.|-+.|.|.|.+.|++++.... . +..+.. ......+|.|.+++.+|+|.|.|.|.+...
T Consensus 60 V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~-~----~~~~~~--~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~ 132 (423)
T 3qs7_E 60 VDVSASITLQVLVDAPGNISCLWVFKHSSLN-C----QPHFDL--QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTIL 132 (423)
T ss_dssp ECSSCCEEEEEECSCCSSCEEEEEETTEEEC-C----CCBC-------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEE
T ss_pred EecCCcEEEEEEEEcCCCCeEEEEECCCccC-c----cceecc--ccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEE
Confidence 3456778888999999999999998874311 1 111100 012246799999999999999999965321
Q ss_pred -----C--CC-----C--CCCCcEEEEEEeE---------EecCCc------------EEEEc-ccCCCCCeeeEEEEec
Q psy534 83 -----S--PN-----S--HKNGTWFHLDVHG---------VFNDGT------------ELRIS-NIRSQDIGDYTCLATH 126 (145)
Q Consensus 83 -----~--~~-----~--~~~g~~~~l~c~~---------~~~~~~------------~L~i~-~v~~~d~G~Y~C~a~n 126 (145)
. +. + ...+..+.|.|.. +...+. .+... .+..+|+|.|+|.|.|
T Consensus 133 ~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N 212 (423)
T 3qs7_E 133 FTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARN 212 (423)
T ss_dssp EEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEEC
T ss_pred EEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEc
Confidence 1 11 0 1235666788972 111110 11111 2257899999999999
Q ss_pred CCC
Q psy534 127 VLY 129 (145)
Q Consensus 127 ~~g 129 (145)
..|
T Consensus 213 ~~G 215 (423)
T 3qs7_E 213 ELG 215 (423)
T ss_dssp SSC
T ss_pred CCC
Confidence 998
No 205
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.14 E-value=2.9e-10 Score=81.44 Aligned_cols=105 Identities=17% Similarity=0.100 Sum_probs=67.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCC-CCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-----
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSY-PTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN----- 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~-~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~----- 81 (145)
...+.++.+.|-+. .|.|.+.|++.+ ...+...+.. ..+.+ ..+|+|.|+|.+.+..
T Consensus 107 v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~~-----------~~~~~-----~~~d~G~Y~C~a~n~~~~~~s 169 (289)
T 3mjg_X 107 LTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYDH-----------QRGFS-----GIFEDRSYICKTTIGDREVDS 169 (289)
T ss_dssp ESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEET-----------TTEEE-----ECCCSSEEEEEEEETTEEEEC
T ss_pred eecCCeEEEEeEcC-CCCceEEEEeCCCCCccceeecC-----------CcCee-----eeccCcEEEEEEEeCCceeee
Confidence 34566777788877 667778887764 2211111111 11111 3679999999996421
Q ss_pred ------C----CCC--------CCCCCcEEEEEEeE---------Ee----------------c------CCcEEEEccc
Q psy534 82 ------R----SPN--------SHKNGTWFHLDVHG---------VF----------------N------DGTELRISNI 112 (145)
Q Consensus 82 ------~----~~~--------~~~~g~~~~l~c~~---------~~----------------~------~~~~L~i~~v 112 (145)
+ ++. ....|+.+.|.|.. +. . ....|.|.++
T Consensus 170 ~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 249 (289)
T 3mjg_X 170 DAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSA 249 (289)
T ss_dssp CCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSC
T ss_pred eeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEccc
Confidence 0 111 12359999999982 11 0 1147999999
Q ss_pred CCCCCeeeEEEEecCCC
Q psy534 113 RSQDIGDYTCLATHVLY 129 (145)
Q Consensus 113 ~~~d~G~Y~C~a~n~~g 129 (145)
+.+|+|.|+|.|.|.+|
T Consensus 250 ~~~D~G~Y~C~a~N~~G 266 (289)
T 3mjg_X 250 ELEDSGTYTCNVTESVN 266 (289)
T ss_dssp CSSCCEEEEEEEEETTT
T ss_pred ChhhCcEEEEEeecCCC
Confidence 99999999999999999
No 206
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.13 E-value=7.7e-10 Score=82.26 Aligned_cols=117 Identities=10% Similarity=0.050 Sum_probs=79.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec-------
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------- 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------- 81 (145)
..+.++.+.|.+.|.|.|.+.|++++.. +......++.+..+ ....+|.|.+++.+|+|.|.|.+.+..
T Consensus 113 ~~g~~~~l~C~~~g~p~~~i~W~~~g~~-l~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~ 188 (389)
T 2jll_A 113 WEGNPINISCDVKSNPPASIHWRRDKLV-LPAKNTTNLKTYST---GRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEY 188 (389)
T ss_dssp CTTCCEEEEECEEEESCCEEEEEETTEE-SSCTTCTTEEEEEC---SSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEE
T ss_pred ccCCEEEEEEEEEecCCCeEEEEECCcc-CCcccCceEEEecc---CCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEE
Confidence 3466788899999999999999999753 22222234444321 336789999999999999999996532
Q ss_pred -----CCCCCC-------CCCcEEEEEEeE-------------------------Ee---cCCcEEEEcccCCCCCeeeE
Q psy534 82 -----RSPNSH-------KNGTWFHLDVHG-------------------------VF---NDGTELRISNIRSQDIGDYT 121 (145)
Q Consensus 82 -----~~~~~~-------~~g~~~~l~c~~-------------------------~~---~~~~~L~i~~v~~~d~G~Y~ 121 (145)
..|... .....+.|.|.. .. .....+.|.++...+.+.|+
T Consensus 189 ~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~ 268 (389)
T 2jll_A 189 ILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIR 268 (389)
T ss_dssp EEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEE
T ss_pred EEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEEEE
Confidence 011111 113445555530 00 12247999999999999999
Q ss_pred EEEecCCC
Q psy534 122 CLATHVLY 129 (145)
Q Consensus 122 C~a~n~~g 129 (145)
|.|.|..|
T Consensus 269 v~A~N~~G 276 (389)
T 2jll_A 269 VAAVNGKG 276 (389)
T ss_dssp EEEEESSC
T ss_pred EEEEcCCc
Confidence 99999988
No 207
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.13 E-value=3.3e-10 Score=79.25 Aligned_cols=88 Identities=16% Similarity=0.225 Sum_probs=59.2
Q ss_pred ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe---------c---------C------CC--------CCC
Q psy534 40 EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL---------N---------R------SP--------NSH 87 (145)
Q Consensus 40 ~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~---------~---------~------~~--------~~~ 87 (145)
..+++|+.+..+ ...++.+|.|.+++.+|+|.|+|.+.+. . + .| ...
T Consensus 66 ~~~~~R~~~~~~-~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~ 144 (232)
T 3qhz_H 66 SSLKTRLTISKD-TSKSQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKS 144 (232)
T ss_dssp TTTTTTEEEEEE-TTTTEEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC----
T ss_pred ccccCceEEEec-cCCCEEEEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccc
Confidence 446678887543 2345788999999999999999999732 0 0 01 011
Q ss_pred CCCcEEEEEEeE-----------Ee---------------c-CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 88 KNGTWFHLDVHG-----------VF---------------N-DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 88 ~~g~~~~l~c~~-----------~~---------------~-~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|..+.|.|.. +. . ++ ..|.|......| |.|+|.|+|..+
T Consensus 145 ~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~ 217 (232)
T 3qhz_H 145 TSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 217 (232)
T ss_dssp ---CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGG
T ss_pred cCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCC
Confidence 347899999981 00 0 11 257788887788 999999999875
No 208
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.13 E-value=1.1e-10 Score=81.67 Aligned_cols=120 Identities=19% Similarity=0.262 Sum_probs=76.6
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. +...+.||+... . .....+++|+.+..+ ....+.+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 90 (226)
T 3mlr_H 12 KQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVD-KSISTAYLQWTTLQASD 90 (226)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEE-GGGTEEEEEESSCCGGG
T ss_pred EecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEec-CCCCEEEEEECCCCccc
Confidence 4456666666766542 234566765321 0 112346788887532 12347889999999999
Q ss_pred CEEEEEEEEEec-------------------C------CCC--------CCCCCcEEEEEEeEE----------e-----
Q psy534 70 QGWYECKVVFLN-------------------R------SPN--------SHKNGTWFHLDVHGV----------F----- 101 (145)
Q Consensus 70 ~G~Y~C~~~~~~-------------------~------~~~--------~~~~g~~~~l~c~~~----------~----- 101 (145)
+|.|+|.+.... + +|. ....|..+.|.|... .
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W~~~~~ 170 (226)
T 3mlr_H 91 TGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 170 (226)
T ss_dssp CEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEECCccc
Confidence 999999984320 0 110 123588999999810 0
Q ss_pred ------------cCC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 ------------NDG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ------------~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.++ ..|.|.....+| |.|+|.|+|..+
T Consensus 171 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 214 (226)
T 3mlr_H 171 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 214 (226)
T ss_dssp CTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGG
T ss_pred cCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCC
Confidence 011 157888888888 999999999876
No 209
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.12 E-value=6.3e-11 Score=84.84 Aligned_cols=107 Identities=11% Similarity=0.005 Sum_probs=73.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec------
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN------ 81 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~------ 81 (145)
...+.++.+.|-+.|. +.|+++... +..+.. .....+|.|.+++.+|+|.|+|.+.+..
T Consensus 16 v~~G~~v~L~C~~~~~----v~W~~~~~~--------~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 80 (292)
T 4dkd_C 16 VKPGATVTLRCVGNGS----VEWDGPPSP--------HWTLYS---DGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAA 80 (292)
T ss_dssp ECTTCCEEEEEECSSC----CCBCCCCCS--------SCEECC---BTTEEEEEESSCCGGGCSCEEECCCC----CCEE
T ss_pred EcCCCcEEEEEcCCCc----eEEccCCCC--------ceEEec---cCceEEEEEcccccccCEEEEEEEccCCCCcceE
Confidence 3466788888988775 889966532 111111 1236799999999999999999985421
Q ss_pred ----C--CCCC---------CCCCcEEEEEEeE----------E---------------ecCCcEEEEcccCCCCCeeeE
Q psy534 82 ----R--SPNS---------HKNGTWFHLDVHG----------V---------------FNDGTELRISNIRSQDIGDYT 121 (145)
Q Consensus 82 ----~--~~~~---------~~~g~~~~l~c~~----------~---------------~~~~~~L~i~~v~~~d~G~Y~ 121 (145)
+ ++.. ...|+.+.|.|.. + ......|.|.+++.+|+|.|+
T Consensus 81 ~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 160 (292)
T 4dkd_C 81 IHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQ 160 (292)
T ss_dssp ECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEE
T ss_pred EEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEE
Confidence 0 1111 2348899999971 0 011235999999999999999
Q ss_pred EEEecCCC
Q psy534 122 CLATHVLY 129 (145)
Q Consensus 122 C~a~n~~g 129 (145)
|.|.|..+
T Consensus 161 C~a~n~~~ 168 (292)
T 4dkd_C 161 CSALMGGR 168 (292)
T ss_dssp EEECSTTS
T ss_pred EEEEeCCC
Confidence 99998866
No 210
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.12 E-value=2e-10 Score=81.98 Aligned_cols=69 Identities=19% Similarity=0.267 Sum_probs=46.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCC--------------cccccccc-eEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPT--------------HEAEEYKG-RISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~--------------~~~~~~~~-R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
+..+..+.+-|-+.+ +.+.+.|||.... .....+.+ |+.+... ..++.+|.|.+++.+|+|.
T Consensus 39 v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~sL~I~~v~~~D~G~ 115 (270)
T 3qib_D 39 KGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECP--SNSPCSLEIQSSEAGDSAL 115 (270)
T ss_dssp EETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECC--TTSCEEEEESSCCGGGCEE
T ss_pred EcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeC--CCcEEEEEECCCCHhHCeE
Confidence 345667777887655 6678899873210 01112223 7766431 2458899999999999999
Q ss_pred EEEEEEE
Q psy534 73 YECKVVF 79 (145)
Q Consensus 73 Y~C~~~~ 79 (145)
|+|.+.+
T Consensus 116 Y~C~~~~ 122 (270)
T 3qib_D 116 YLCASSL 122 (270)
T ss_dssp EEEEEES
T ss_pred EEEEEec
Confidence 9999973
No 211
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.11 E-value=1.4e-09 Score=83.65 Aligned_cols=122 Identities=17% Similarity=0.195 Sum_probs=81.7
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---Cc-------------ccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---TH-------------EAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~-------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+..+..+.+-|.+.+.+ .+.+.||++.. .. ....+.+|+.+..+ ...++++|.|.+++.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~ 90 (475)
T 1iga_A 12 VKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRD-TSATTAYMGLSSLRPE 90 (475)
T ss_pred EEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEc-CCCCeEEEEECCCChh
Confidence 355677888889887654 66789988631 10 01235678876532 2234689999999999
Q ss_pred CCEEEEEEEEEec----------------CC------CC-------CCCCCcEEEEEEeEE---------e---cC----
Q psy534 69 DQGWYECKVVFLN----------------RS------PN-------SHKNGTWFHLDVHGV---------F---ND---- 103 (145)
Q Consensus 69 D~G~Y~C~~~~~~----------------~~------~~-------~~~~g~~~~l~c~~~---------~---~~---- 103 (145)
|+|.|+|.+.+.. +. |. ....|..+.|.|... + .+
T Consensus 91 D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~ 170 (475)
T 1iga_A 91 DTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGV 170 (475)
T ss_pred hCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEeeecCCCceEEEEcCCCccc
Confidence 9999999996531 00 10 013588999999721 0 00
Q ss_pred -------------C-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 -------------G-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 -------------~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ..|.|..+..+|+|.|+|.|.|..+
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 214 (475)
T 1iga_A 171 TARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTN 214 (475)
T ss_pred ceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCC
Confidence 1 1356667777899999999999987
No 212
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.11 E-value=6.5e-10 Score=79.91 Aligned_cols=70 Identities=16% Similarity=0.250 Sum_probs=52.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
+..+..+.+-|-+.+.+.+.+.||++.. . .....+.+|+.+..+ ..++.+|.|.+++.+|+|
T Consensus 36 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~--~~~~~sL~I~~v~~~D~G 113 (279)
T 2wbj_D 36 SKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA--SLTLSTLTVTSAHPEDSS 113 (279)
T ss_dssp EETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEEC--SSSEEEEEESSCCGGGCE
T ss_pred ecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeC--CCCEEEEEEccCCccCCE
Confidence 4566778888998888889999998641 1 011235678877542 245789999999999999
Q ss_pred EEEEEEEE
Q psy534 72 WYECKVVF 79 (145)
Q Consensus 72 ~Y~C~~~~ 79 (145)
.|+|.+.+
T Consensus 114 ~Y~C~~~~ 121 (279)
T 2wbj_D 114 FYICSARD 121 (279)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcc
Confidence 99999987
No 213
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.10 E-value=1.7e-09 Score=76.18 Aligned_cols=73 Identities=12% Similarity=0.208 Sum_probs=51.3
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCCC---Cc-c-----------ccc-ccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSYP---TH-E-----------AEE-YKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~~-~-----------~~~-~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+..+..+.+-|.+.+. +.+.+.||++.. .. + ... +.+|+.+..+ ...++.+|.|.+++.+
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~ 90 (242)
T 1hxm_B 12 TKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRI-PETSTSTLTIHNVEKQ 90 (242)
T ss_dssp EEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEE-TTTTEEEEEECSCCGG
T ss_pred EecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEec-CCCcEEEEEECCCCcc
Confidence 34567788888988865 667899988531 10 0 112 5678876532 1235789999999999
Q ss_pred CCEEEEEEEEEe
Q psy534 69 DQGWYECKVVFL 80 (145)
Q Consensus 69 D~G~Y~C~~~~~ 80 (145)
|+|.|+|.+.+.
T Consensus 91 D~G~Y~C~~~~~ 102 (242)
T 1hxm_B 91 DIATYYCALWEA 102 (242)
T ss_dssp GCEEEEEEEEEE
T ss_pred cCEEEEEeeecC
Confidence 999999999753
No 214
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.10 E-value=6.1e-11 Score=84.96 Aligned_cols=71 Identities=18% Similarity=0.215 Sum_probs=51.1
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---Cc-------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---TH-------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~-------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+.+ .+.+.||+... .. ..+.+.+|+.+..+ ...++.+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 90 (257)
T 3bn9_D 12 VKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRD-NSKNTLYLQMSSLRAED 90 (257)
T ss_dssp ECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEE-TTTTEEEEEEESCCGGG
T ss_pred EcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEec-CCCCEEEEEECCCChhh
Confidence 45677888889888765 57788987641 10 11235678876532 23457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 91 sG~Y~C~~~~ 100 (257)
T 3bn9_D 91 TAVYYCARPY 100 (257)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999999965
No 215
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.10 E-value=2.4e-10 Score=81.24 Aligned_cols=71 Identities=18% Similarity=0.140 Sum_probs=46.1
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC----------------CcccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP----------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~----------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. +...+.||+... ......+++|+.+..+ ....+.+|.|.+++.+|
T Consensus 11 v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 89 (248)
T 3u2s_H 11 VQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRD-NSKDTLYLQMNSLRVED 89 (248)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred EeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEec-CCCCEEEEEECCCCHHH
Confidence 3456666677766542 344566765421 0122346788887532 12347889999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 90 sG~Y~C~~~~ 99 (248)
T 3u2s_H 90 TATYFCVREA 99 (248)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEeC
Confidence 9999999874
No 216
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.10 E-value=4.6e-10 Score=79.80 Aligned_cols=120 Identities=18% Similarity=0.183 Sum_probs=75.8
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|-+.+. ....+.||+... . .....+++|+.+..+ ...++.+|.|.+++.+|
T Consensus 35 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D 113 (256)
T 3sob_H 35 VQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISAD-TSKNTAYLQMNSLRAED 113 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred EcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEe-CCCCEEEEEECCCCccc
Confidence 3456666677766542 234567775321 0 112346788887543 23457789999999999
Q ss_pred CEEEEEEEEEec---------------------C------CC--------CCCCCCcEEEEEEeEE--------e-----
Q psy534 70 QGWYECKVVFLN---------------------R------SP--------NSHKNGTWFHLDVHGV--------F----- 101 (145)
Q Consensus 70 ~G~Y~C~~~~~~---------------------~------~~--------~~~~~g~~~~l~c~~~--------~----- 101 (145)
+|.|+|.+.... + +| .....|..+.|.|... +
T Consensus 114 sG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~W~~~ 193 (256)
T 3sob_H 114 TAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 193 (256)
T ss_dssp CEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred CEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEEECCc
Confidence 999999986310 0 11 0123588999999710 0
Q ss_pred --------------cCC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 --------------NDG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 --------------~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.++ ..|.|.....+| |.|+|.|+|..+
T Consensus 194 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~ 239 (256)
T 3sob_H 194 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 239 (256)
T ss_dssp TBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGG
T ss_pred ccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCC
Confidence 011 257788888888 999999999875
No 217
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.09 E-value=8.7e-10 Score=83.73 Aligned_cols=112 Identities=10% Similarity=0.032 Sum_probs=77.0
Q ss_pred hhccceeeEEeecCCCcc---EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC---
Q psy534 9 SIFQMLSVGDFADDEDIP---VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR--- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p---~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~--- 82 (145)
..+.++.+.|-+.|.|.+ .+.|||++....... +. ....+++|.|.+++.+|+|.|+|++.+...
T Consensus 99 ~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~---~~------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 169 (450)
T 1z7z_I 99 PVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP---AV------GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQG 169 (450)
T ss_dssp CTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE---CC------TTTEEEEEEEECCSSCSSCEEEEEEEEECGGGT
T ss_pred eeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccc---cc------ccccceEEEEEeeccccCceEEEEEEcccCCCC
Confidence 456778889999998877 999999975421111 00 113367999999999999999999986510
Q ss_pred -----------------C----C-----CCCCCCcEEEEEEeEEec------------C-----------CcEEEEc---
Q psy534 83 -----------------S----P-----NSHKNGTWFHLDVHGVFN------------D-----------GTELRIS--- 110 (145)
Q Consensus 83 -----------------~----~-----~~~~~g~~~~l~c~~~~~------------~-----------~~~L~i~--- 110 (145)
. | .....|+.+.|.|..... + +..+.+.
T Consensus 170 ~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 249 (450)
T 1z7z_I 170 LELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASV 249 (450)
T ss_dssp SCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCCEEEEETTEEEEEEEE
T ss_pred ceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCceEEecCCceeEEEEE
Confidence 0 1 112348999999983210 1 1122222
Q ss_pred ccCCCCCe--eeEEEEecCCC
Q psy534 111 NIRSQDIG--DYTCLATHVLY 129 (145)
Q Consensus 111 ~v~~~d~G--~Y~C~a~n~~g 129 (145)
+++.+|+| .|+|.|.|..|
T Consensus 250 ~v~~~d~G~~~Y~C~a~n~~g 270 (450)
T 1z7z_I 250 SVTAEDEGTQRLTCAVILGNQ 270 (450)
T ss_dssp ECCGGGCEEEEEEEEEEETTE
T ss_pred EeEhhhCCcEEEEEEEccCCc
Confidence 66899999 99999999987
No 218
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.09 E-value=1.5e-10 Score=72.40 Aligned_cols=66 Identities=21% Similarity=0.150 Sum_probs=49.9
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|-+.|.|.|.+.|+|++... .. ..|+.+..+ ....+|.|.+++.+|+|.|.|.|.|.
T Consensus 26 ~~G~~~~l~C~~~G~P~p~v~W~k~g~~l-~~--~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 26 VSGAEAELKCVVLGEPPPVVVWEKGGQQL-AA--SERLSFPAD---GAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp ETTSCEEEEEEEEEESCCEEEEEETTEEC-CC--CSSEECCEE---TTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred eCCCcEEEEEEEEEecCCEEEEEECcccc-cc--eeeEEEeec---CceEEEEEecCChhhCEEEEEEEEEC
Confidence 45677888899999999999999998542 21 234444221 23678999999999999999999863
No 219
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.09 E-value=1.4e-10 Score=80.04 Aligned_cols=71 Identities=13% Similarity=0.076 Sum_probs=45.4
Q ss_pred hhhccceeeEEeecCCC----ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDED----IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p----~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|.+.|.+ .+.+.|++++..........+..+ .+..-....+|.|.+++.+|+|.|+|.+.+
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~-~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~ 89 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQ-FNSTFRSVSELPIMHQDWLNGKEFKCRVNS 89 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEE-TTTEEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCc-CCCcEEEEEEEEEehhHcCCCCEEEEEEEc
Confidence 56788999999998763 348999998843211000000000 000001256799999999999999999964
No 220
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.09 E-value=7.9e-11 Score=81.91 Aligned_cols=72 Identities=13% Similarity=-0.013 Sum_probs=46.8
Q ss_pred hhhccceeeEEeecCC---C-ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDE---D-IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~---p-~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|.+.|. | .+.+.|+|++.... ...........+..-....+|.|.+++.+|+|.|+|++.+.
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~-~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~ 98 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVH-TAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNK 98 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEEC-CCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEET
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCcccc-CcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECC
Confidence 5678889999999876 3 37899999984321 11111111100000012568999999999999999999653
No 221
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.09 E-value=2.6e-10 Score=81.86 Aligned_cols=104 Identities=13% Similarity=0.017 Sum_probs=73.3
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe-------c
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL-------N 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~-------~ 81 (145)
..+.++.+.|-+.| .+.|++++... +... ....+|.|.+++.+|+|.|+|.+.+. .
T Consensus 25 ~~G~~v~l~C~~~~----~i~W~~~~~~~-------~~~~------~~~~~L~i~~~~~~d~G~Y~C~~~ng~~~~~~l~ 87 (290)
T 2o26_X 25 EAGDTLSLTCIDPD----FVRWTFKTYFN-------EMVE------NKKNEWIQEKAEATRTGTYTCSNSNGLTSSIYVF 87 (290)
T ss_dssp ETTSCEEEEEECTT----EEEEEEECSSS-------CEEE------ECSSEEEETTCCGGGCEEEEEEESSSCEEEEEEE
T ss_pred cCCCcEEEEECCCC----cEEEecCCcce-------eeec------CCCceEEEeccCHHhCeEEEEEeeCCccEEEEEE
Confidence 44667777887777 79999998642 1111 11488999999999999999998431 0
Q ss_pred --CCCCC--------CCCCcEEEEEEeE---------E-e--------------cCCcEEEEcccCCCCCe-eeEEEEec
Q psy534 82 --RSPNS--------HKNGTWFHLDVHG---------V-F--------------NDGTELRISNIRSQDIG-DYTCLATH 126 (145)
Q Consensus 82 --~~~~~--------~~~g~~~~l~c~~---------~-~--------------~~~~~L~i~~v~~~d~G-~Y~C~a~n 126 (145)
.++.. ...|+.+.|.|.. + . .....|.|.+++.+|+| .|+|.|.|
T Consensus 88 V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n 167 (290)
T 2o26_X 88 VRDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQR 167 (290)
T ss_dssp EECSSCCBCCCCCEEEETTSCEEECCCBSCCSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEE
T ss_pred EeCCCcccccccceEEecCCeEEEeCcCCCCCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEE
Confidence 01111 2248888888871 1 1 12247999999999999 99999999
Q ss_pred CCC
Q psy534 127 VLY 129 (145)
Q Consensus 127 ~~g 129 (145)
..+
T Consensus 168 ~~~ 170 (290)
T 2o26_X 168 DGT 170 (290)
T ss_dssp TTE
T ss_pred CCc
Confidence 855
No 222
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.07 E-value=8.6e-10 Score=69.05 Aligned_cols=67 Identities=9% Similarity=-0.002 Sum_probs=51.2
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|.+.|.|.|.+.|+|++.... ...|+.+... ....+|.|.+++.+|+|.|+|.+.+.
T Consensus 19 v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~---~~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 19 VRAGESVELFGKVTGTQPITCTWMKFRKQIQ---ESEHMKVENS---ENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp EETTCCEEEEEEEESSSSCEEEEEESSSBCC---CSSSEEEEEC---SSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred EeCCCeEEEEEEEEcCCCCEEEEEECCEECc---CCCCEEEEEc---CCEEEEEECCCChhcCEEEEEEEEEC
Confidence 3557788899999999999999999985422 1234444321 34788999999999999999999753
No 223
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.05 E-value=1e-09 Score=70.75 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=45.8
Q ss_pred ceeeEEeecCCCccEEEEecCCCCcccccccceEEEec--CCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 13 MLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVD--KESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 13 ~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~--~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+.+-|-+.|+|.|.+.|+|++........ ....... .+.....++|.|.+++.+|+|.|+|.|.|.
T Consensus 17 ~~~l~c~v~G~P~P~I~W~knG~~l~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~ 85 (126)
T 1he7_A 17 HWCIPFSVDGQPAPSLRWLFNGSVLNETSF-IFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANP 85 (126)
T ss_dssp EEEEEEEECCSSCCEEEEEETTEECCCCSS-EEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEET
T ss_pred cEEEEEEEeeeCCCeEEEEECCEECCCCCc-eeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEEC
Confidence 455667788999999999999854322111 1112211 011123688999999999999999999763
No 224
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.05 E-value=3e-10 Score=91.35 Aligned_cols=121 Identities=19% Similarity=0.258 Sum_probs=43.1
Q ss_pred hhccceeeEEeecC--CCccEEEEecCCCCcccccccc-eEEEe-cCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC--
Q psy534 9 SIFQMLSVGDFADD--EDIPVYIWYDSYPTHEAEEYKG-RISRV-DKESPFGMASLNLTKIRESDQGWYECKVVFLNR-- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g--~p~p~~~w~k~~~~~~~~~~~~-R~~~~-~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~-- 82 (145)
..+.++.+.|-+.+ .+.+.+.|++++.......... ..... .........+|.|.+++.+|+|.|+|.+.+...
T Consensus 237 ~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 316 (772)
T 3v2a_R 237 SVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTK 316 (772)
T ss_dssp ETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEE
T ss_pred ecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcce
Confidence 45677888898886 5567899999875421111110 00000 000112367899999999999999999964320
Q ss_pred ----------CC-----------CCCCCCcEEEEEEeE---------Ee------------cCCcEEEEcccCCCCCeee
Q psy534 83 ----------SP-----------NSHKNGTWFHLDVHG---------VF------------NDGTELRISNIRSQDIGDY 120 (145)
Q Consensus 83 ----------~~-----------~~~~~g~~~~l~c~~---------~~------------~~~~~L~i~~v~~~d~G~Y 120 (145)
+| .....|+.+.|.|.. +. .....|.|.+++.+|+|.|
T Consensus 317 ~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y 396 (772)
T 3v2a_R 317 KNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNY 396 (772)
T ss_dssp EEEEEEEEECCCC-------------------------------------------------------------------
T ss_pred eEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeEEEecCChhcCceE
Confidence 11 112458899999971 00 1125799999999999999
Q ss_pred EEEEecCCC
Q psy534 121 TCLATHVLY 129 (145)
Q Consensus 121 ~C~a~n~~g 129 (145)
+|.|.|..|
T Consensus 397 ~C~a~n~~g 405 (772)
T 3v2a_R 397 TVILTNPIS 405 (772)
T ss_dssp ---------
T ss_pred EEEEEECCc
Confidence 999999887
No 225
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.04 E-value=7e-10 Score=67.40 Aligned_cols=69 Identities=16% Similarity=0.159 Sum_probs=52.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.|.|.|.+.|++++.. +.....+|+.+... ....+|.|.+++.+|+|.|.|.+.+.
T Consensus 17 ~~~G~~~~l~C~~~g~p~p~v~W~~~~~~-~~~~~~~~~~~~~~---~~~~~L~i~~v~~~D~G~Y~C~a~n~ 85 (100)
T 3irg_A 17 IDEGKVLTVACAFTGEPTPEVTWSCGGRK-IHSQEQGRFHIENT---DDLTTLIIMDVQKQDGGLYTLSLGNE 85 (100)
T ss_dssp EETTSEEEEEEEEEEESCCEEEEEETTEE-CCTTGGGTEEEEEC---SSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred EcCCCcEEEEEEEEEcCCCceEEEECCEE-eecCCCCEEEEEec---CCEEEEEEeecCcccCEEEEEEEEeC
Confidence 34567788899999999999999998743 33233456665432 33588999999999999999999753
No 226
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.03 E-value=8e-10 Score=69.65 Aligned_cols=34 Identities=32% Similarity=0.442 Sum_probs=30.2
Q ss_pred ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 40 EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 40 ~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
+.+++|..+. .+++|.|++|+++|+|.|+|++.+
T Consensus 60 ~~~~gR~~~~------~ngSL~I~nvt~~D~G~Ytc~v~~ 93 (111)
T 2qsq_A 60 PAYSGREIIY------PNASLLIQNIIQNDAGFYTLHVIK 93 (111)
T ss_dssp TTCCSCEEEC------TTSCEEECSCCGGGCEEEEEEEEE
T ss_pred cccCCcEEEe------cCCcEEEccCcccCCeEEEEEEEe
Confidence 4588999984 489999999999999999999975
No 227
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.03 E-value=4e-10 Score=69.74 Aligned_cols=70 Identities=10% Similarity=-0.058 Sum_probs=46.7
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
....+.+.|-+.|.|.|.+.|+|++... ...-..+..+.........++|.|.+++.+|+|.|.|.|.|.
T Consensus 15 ~~~~~~~~c~v~G~P~P~i~W~k~g~~l-~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 84 (103)
T 1wwb_X 15 SDHHWCIPFTVKGNPKPALQWFYNGAIL-NESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNE 84 (103)
T ss_dssp CCCEEEEEEEEECSSCCEEEEEETTEEE-CCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECS
T ss_pred ECcEEEEEEEEEEeCCCEEEEEECCEEC-CCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeC
Confidence 3445667788899999999999998542 222111111111111123566999999999999999999753
No 228
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.03 E-value=1.5e-09 Score=65.49 Aligned_cols=65 Identities=15% Similarity=0.028 Sum_probs=49.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCC--CCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSY--PTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~--~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|-+.|.|.|.+.|++++ .. +.... +.... ....+|.|.+++.+|+|.|.|.|.+.
T Consensus 14 v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~-~~~~~--~~~~~-----~~~~~L~i~~~~~~D~G~Y~C~a~N~ 80 (93)
T 1wit_A 14 IKAGFTHNLEVDFIGAPDPTATWTVGDSGAA-LAPEL--LVDAK-----SSTTSIFFPSAKRADSGNYKLKVKNE 80 (93)
T ss_dssp ECTTBCCEEEEEEECCSSCEEEEECSTTTCB-CSTTS--EEEEE-----TTEEEEECTTBCGGGCEEEEEEEEET
T ss_pred EeCCCEEEEEEEEEEcCCCEEEEEECCCCcc-cCCcE--EEEec-----CCEEEEEECCCChhcCEEEEEEEEcC
Confidence 345677888999999999999999998 54 22221 22221 34688999999999999999999863
No 229
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.02 E-value=8.7e-10 Score=68.55 Aligned_cols=72 Identities=15% Similarity=0.256 Sum_probs=48.7
Q ss_pred hhhccceeeEEeecCCCc---cEEEEecCCCCcccccccceEEEec---CCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDI---PVYIWYDSYPTHEAEEYKGRISRVD---KESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~---p~~~w~k~~~~~~~~~~~~R~~~~~---~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|.+.|.|. |.+.|||++..........|+.+.. ........+|.|.+++.+|+|.|+|.+.+
T Consensus 16 v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 93 (108)
T 3cx2_A 16 VTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVST 93 (108)
T ss_dssp EETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEec
Confidence 456778899999999998 9999999762211111122333321 00112367899999999999999999975
No 230
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.02 E-value=8.6e-10 Score=67.08 Aligned_cols=68 Identities=13% Similarity=0.024 Sum_probs=49.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.|.|.|.+.|++++..... ..+..+... ..+..+|.|.+++.+|+|.|.|.+.+.
T Consensus 17 v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~---~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 84 (99)
T 1g1c_A 17 VGQGSDAHFRVRVVGKPDPECEWYKNGVKIER---SDRIYWYWP--EDNVCELVIRDVTGEDSASIMVKAINI 84 (99)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCC---CSSEEEEEE--ETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EcCCCcEEEEEEEEEeCCCEEEEEECCEECCC---CCCEEEEEc--CCCEEEEEECCCCcCCCEEEEEEEEEC
Confidence 35567888999999999999999999854221 122222110 133678999999999999999999763
No 231
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.01 E-value=3.7e-10 Score=68.93 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=49.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.|.|.|.+.|++++..........+.... ...++|.|.+++.+|+|.|.|.+.+.
T Consensus 20 v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~N~ 87 (100)
T 3caf_A 20 VPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR-----NQHWSLIMESVVPSDKGNYTCVVENE 87 (100)
T ss_dssp ECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEE-----GGGTEEEECSCCGGGCEEEEEEEEET
T ss_pred ecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEe-----cCeEEEEEccCCcCCCEEEEEEEEeC
Confidence 346788889999999999999999987542221111122221 23568999999999999999999753
No 232
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.00 E-value=1.6e-09 Score=69.50 Aligned_cols=72 Identities=21% Similarity=0.291 Sum_probs=50.5
Q ss_pred hhhccceeeEEeecCCC---ccEEEEecCCC--------------CcccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDED---IPVYIWYDSYP--------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p---~p~~~w~k~~~--------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+-|.+...+ ...+.|+|.+. ....+.|.+|+.+..+....++.+|.|.+|+.+|+
T Consensus 17 g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~D~ 96 (125)
T 4gos_A 17 GNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDA 96 (125)
T ss_dssp EETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGGGC
T ss_pred EeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChHHC
Confidence 34566666677664221 23566776532 12345688999987765566789999999999999
Q ss_pred EEEEEEEEE
Q psy534 71 GWYECKVVF 79 (145)
Q Consensus 71 G~Y~C~~~~ 79 (145)
|.|+|++.+
T Consensus 97 G~Y~C~v~~ 105 (125)
T 4gos_A 97 GTYKCYIIT 105 (125)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 999999974
No 233
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.00 E-value=8e-10 Score=72.33 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=49.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC---------------------------CcccccccceEEEecCCCCCCeeeE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP---------------------------THEAEEYKGRISRVDKESPFGMASL 60 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~---------------------------~~~~~~~~~R~~~~~~~~~~~~~sL 60 (145)
...+..+.+.|-+.|.|.|.+.|+|++. ..+ .....|+.+... ....+|
T Consensus 30 v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~r~~i~~~---~~~s~L 105 (139)
T 1gxe_A 30 VVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLL-CETEGRVRVETT---KDRSIF 105 (139)
T ss_dssp ESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCC-CSCSSSCEEEEE---TTEEEE
T ss_pred EeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceee-cCCCCeEEEEeC---CCEEEE
Confidence 4566788889999999999999999872 111 012234444221 124679
Q ss_pred EEcccCCCCCEEEEEEEEEe
Q psy534 61 NLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 61 ~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.|.+++.+|+|.|.|.|.|.
T Consensus 106 ~I~~v~~~DsG~Y~C~A~N~ 125 (139)
T 1gxe_A 106 TVEGAEKEDEGVYTVTVKNP 125 (139)
T ss_dssp ECSCCCTTTCEEEEEEEECS
T ss_pred EECCCCcccCEEEEEEEEeC
Confidence 99999999999999999853
No 234
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.99 E-value=8.1e-10 Score=67.20 Aligned_cols=68 Identities=21% Similarity=0.273 Sum_probs=49.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.|.|.|.+.|++++..... -..+.....+ .+..+|.|.+++.+|+|.|.|.+.+.
T Consensus 17 v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~--~~~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~N~ 84 (99)
T 1u2h_A 17 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRP--DQRRFAEEAE---GGLCRLRILAAERGDAGFYTCKAVNE 84 (99)
T ss_dssp EETTCCEEEEEEEEEESCCEEEEEETTEECCC--BTTEEEEECG---GGEEEEEESSCCGGGCEEEEEEEEET
T ss_pred ecCCCEEEEEEEEEEcCCCEEEEEECCEECCC--CCCEEEEECC---CCEEEEEEccCCcCCCEEEEEEEEEC
Confidence 34677888999999999999999999854221 1223333221 23458999999999999999999753
No 235
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=98.98 E-value=9.8e-10 Score=78.80 Aligned_cols=120 Identities=16% Similarity=0.168 Sum_probs=72.7
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---------------CcccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+-|.+.+.+ ...+.||+... ......+++|+.+..+ ...++.+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~Ds 90 (263)
T 3iu4_H 12 VAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKD-NSKSQVFLKMNSLQTDDT 90 (263)
T ss_dssp ECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEE-GGGTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEec-CCCCEEEEEECCCCHHHC
Confidence 44566666667665432 34566765321 0122346788887532 123477899999999999
Q ss_pred EEEEEEEEEec------------------C------CC--------CCCCCCcEEEEEEeEE----------e-------
Q psy534 71 GWYECKVVFLN------------------R------SP--------NSHKNGTWFHLDVHGV----------F------- 101 (145)
Q Consensus 71 G~Y~C~~~~~~------------------~------~~--------~~~~~g~~~~l~c~~~----------~------- 101 (145)
|.|+|.+.... + +| .....|..+.|.|... .
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~~~~~ 170 (263)
T 3iu4_H 91 AMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSWNSGALTS 170 (263)
T ss_dssp EEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred EEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEECCcccCC
Confidence 99999985320 0 01 0112578899999810 0
Q ss_pred ----------cCC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 102 ----------NDG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 102 ----------~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.++ ..|.|.....+| |.|+|.|.|..+
T Consensus 171 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 212 (263)
T 3iu4_H 171 GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 212 (263)
T ss_dssp TEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGG
T ss_pred ceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCC
Confidence 011 146777776677 999999999875
No 236
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.97 E-value=1.2e-09 Score=66.90 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=49.4
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|.+.|.|.|.+.|+|++... .. ..|..+... ....+|.|.+++.+|+|.|.|.+.+.
T Consensus 21 ~~G~~v~l~C~~~g~p~p~i~W~k~~~~~-~~--~~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~N~ 86 (103)
T 3qp3_A 21 PCGQNTRFILNVQSKPTAEVKWYHNGVEL-QE--SSKIHYTNT---SGVLTLEILDCHTDDSGTYRAVCTNY 86 (103)
T ss_dssp ETTCCEEEEEEEEEESCCEEEEEETTEEC-CC--CSSEEEEEE---TTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred eCCCeEEEEEEEEecCCCEEEEEECCEEC-CC--CCCEEEEEC---CCEEEEEEcCCCcccCEEEEEEEEeC
Confidence 45677888899999999999999998542 21 123333221 23678999999999999999999763
No 237
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.97 E-value=6e-10 Score=84.74 Aligned_cols=71 Identities=11% Similarity=-0.041 Sum_probs=47.2
Q ss_pred hhhccceeeEEeecCCC----ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDED----IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p----~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|-+.|.+ .+.+.|++++.. +......+.....+......++|.|.+++.+|+|.|.|.|.+
T Consensus 252 ~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n 326 (444)
T 1igt_B 252 LMISLSPIVTCVVVDVSEDDPDVQISWFVNNVE-VHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNN 326 (444)
T ss_dssp HCTTSCCEEEEEEEEECTTCCCCEEEEEETTEE-CSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred eecCCCcEEEEEEeecccCCCCeEEEEEECCcc-ccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEc
Confidence 35678889999998763 468999999843 222222221111110011256899999999999999999965
No 238
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.97 E-value=1.6e-09 Score=66.03 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=49.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|-+.|.|.|.+.|++++.. +...-..+..... .+..+|.|.+++.+|+|.|+|.+.+.
T Consensus 17 ~~~G~~~~l~C~~~g~p~p~v~W~~~g~~-~~~~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~ 84 (100)
T 2kdg_A 17 IDEGRFCRMDFKVSGLPAPDVSWYLNGRT-VQSDDLHKMIVSE----KGLHSLIFEVVRASDAGAYACVAKNR 84 (100)
T ss_dssp EETTCCEEEEEECEEESCCEEEEEETTEE-ECCCSSSCEEEET----TTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred ecCCCEEEEEEEEEeeCCCEEEEEECCEE-CcCCCcEEEEEcC----CCeEEEEECCCCcccCEEEEEEEEcC
Confidence 34567888999999999999999998753 2222222222211 23468999999999999999999753
No 239
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.97 E-value=5.8e-10 Score=66.76 Aligned_cols=64 Identities=19% Similarity=0.159 Sum_probs=46.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
+..+.++.+.|-..| |.|.+.|||++... . ...++.+..+ ....+|.|.+++.+|+|.|.|+|.
T Consensus 8 ~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l-~--~~~~~~~~~~---~~~~~L~I~~~~~~D~G~Y~C~a~ 71 (84)
T 2lu7_A 8 STPGGDLELVVHLSG-PGGPVRWYKDGERL-A--SQGRVQLEQA---GARQVLRVQGARSGDAGEYLCDAP 71 (84)
T ss_dssp ECTTSCEEEECCCSC-CSTTCEEEETTEEC-C--CCSSEEEEEC---SSCEEEEESSCSSTTCEEEEEECT
T ss_pred EecCCCEEEEEEECC-CCcEEEEEECCEEc-c--ccccEEEeec---CCeEEEEecCCCCcccEEEEEEEC
Confidence 345778888887755 88889999998542 2 2234444332 335789999999999999999873
No 240
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.97 E-value=2.6e-09 Score=68.05 Aligned_cols=42 Identities=26% Similarity=0.386 Sum_probs=34.9
Q ss_pred ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 38 EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 38 ~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+.|++|+.+...+...++.+|.|.+++.+|+|.|+|.+..
T Consensus 60 ~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~t 101 (123)
T 4gjt_B 60 VSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEGEYECRVST 101 (123)
T ss_dssp BCGGGTTTEECCCSSCCTTBCCEEEESCCSSSCSEEEEEEEE
T ss_pred eCccceeEEEEecCCCcCCEEEEEECCCChHHCEEEEEEEEE
Confidence 345678899887665666789999999999999999999863
No 241
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=2.7e-09 Score=66.27 Aligned_cols=69 Identities=13% Similarity=0.023 Sum_probs=50.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.|.|.|.+.|++++..... ...|+.+..+ ..+..+|.|.+++.+|+|.|+|.+.+.
T Consensus 20 v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~--~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 88 (110)
T 2dm2_A 20 IFEGMPVTFTCRVAGNPKPKIYWFKDGKQISP--KSDHYTIQRD--LDGTCSLHTTASTLDDDGNYTIMAANP 88 (110)
T ss_dssp EETTCCEEEEEEBCCSSCCEEEEECSSCBCCT--TCSSEEEEEC--TTCEEEEEESSCCTTTCSCCEEEEECT
T ss_pred EeCCCeEEEEEEEEecCCCEEEEEECCEECCC--CCCeEEEEEC--CCcEEEEEECCCChhhCEEEEEEEEEC
Confidence 34667888999999999999999998754321 1234444321 123458999999999999999999753
No 242
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.96 E-value=7.5e-10 Score=67.63 Aligned_cols=64 Identities=20% Similarity=0.244 Sum_probs=49.2
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|.+.|.|.|.+.|++++.... ....|+.+ ..+++|.|.+++.+|+|.|.|.+.+.
T Consensus 21 ~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~--~~~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~n~ 84 (100)
T 2edj_A 21 AVDGTALLKCKATGDPLPVISWLKEGFTFP--GRDPRATI------QEQGTLQIKNLRISDTGTYTCVATSS 84 (100)
T ss_dssp ESSSEEEECCEEECSSCCEEEEEESSSEES--SSCSSCEE------CTTCCEEEESCCTTTCCEEEEEEECS
T ss_pred cCCCcEEEEEEEEEcCCCEEEEEECCEECC--CCCCCEEE------cCCCEEEEccCCcccCEEEEEEEEcC
Confidence 456778888999999999999999875422 12234444 23678999999999999999999864
No 243
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.96 E-value=1.5e-09 Score=65.91 Aligned_cols=67 Identities=24% Similarity=0.240 Sum_probs=50.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|-+.|.|.|.+.|++++.. +. ...|+.+..+ ....+|.|.+++.+|+|.|.|.+.+.
T Consensus 18 v~~G~~~~l~C~~~g~p~p~v~W~~~g~~-~~--~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 18 VSSDSVAKFAVKATGEPRPTAIWTKDGKA-IT--QGGKYKLSED---KGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EESSSCEEEEEEEEEESCCEEEEEETTEE-CC--SSSSEEEEEE---TTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EeCCCcEEEEEEEEecCCCEEEEEECCEE-Cc--CCCCEEEEEe---CCEEEEEECCCCcccCEEEEEEEEeC
Confidence 34567788889999999999999998743 22 2244544321 23568999999999999999999753
No 244
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=1.1e-09 Score=69.03 Aligned_cols=65 Identities=15% Similarity=0.278 Sum_probs=50.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|.+.|.|.+.+.|++++..... ...|+.... +++|.|.+++.+|+|.|+|.+.+.
T Consensus 20 v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~--~~~~~~~~~------~~~L~i~~v~~~D~G~Y~C~a~n~ 84 (118)
T 2eo9_A 20 VAVDGTFVLSCVATGSPVPTILWRKDGVLVST--QDSRIKQLE------NGVLQIRYAKLGDTGRYTCIASTP 84 (118)
T ss_dssp EETTCEEEEECBCCCSSCCEEEEEESSSBCCT--TSTTEEEEE------TTEEEEESCCGGGCCCEEEEEECS
T ss_pred EcCCCeEEEEEEEEecCCCEEEEEECCEECcC--CCCeEEEcc------CCEEEEccCCcCCCEEEEEEEEcC
Confidence 34567888999999999999999998754221 234454422 568999999999999999999753
No 245
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.95 E-value=8.8e-09 Score=78.17 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=74.9
Q ss_pred hhccceeeEEeecCC-C--ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCE--EEEEEEEEecC-
Q psy534 9 SIFQMLSVGDFADDE-D--IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQG--WYECKVVFLNR- 82 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~-p--~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G--~Y~C~~~~~~~- 82 (145)
..+.++.+.|-+.|. | .+.+.|++++... .. ++....+ .....+.+ +++.+|+| .|.|.+.+...
T Consensus 201 ~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~-~~----~~~~~~~---~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~ 271 (450)
T 1z7z_I 201 EVDTQGTVVCSLDGLFPVSEAQVHLALGDQRL-NP----TVTYGND---SFSAKASV-SVTAEDEGTQRLTCAVILGNQS 271 (450)
T ss_dssp ETTSEEEEEEEEESCTTGGGCEEEEEETTEEC-CC----EEEEETT---EEEEEEEE-ECCGGGCEEEEEEEEEEETTEE
T ss_pred EeCCcEEEEEEeeCCCCCCceEEEEeCCCEeC-Cc----eEEecCC---ceeEEEEE-EeEhhhCCcEEEEEEEccCCcc
Confidence 456677888999988 7 7899999998542 11 3333211 00111222 78999999 99999965420
Q ss_pred -------------CC------CCCCCCcEEEEEEeEE--------------ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 -------------SP------NSHKNGTWFHLDVHGV--------------FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 -------------~~------~~~~~g~~~~l~c~~~--------------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+| .....|+.+.|.|... ......|.|.+++.+|+|.|+|.|.|..+
T Consensus 272 ~~~~~~l~V~~~~~p~i~~~~~~v~~G~~v~l~C~~~p~p~i~W~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 351 (450)
T 1z7z_I 272 QETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVA 351 (450)
T ss_dssp EEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEEC----------------CCCCCEEEECCGGGTTCEEEEEEEEEET
T ss_pred EEEEEEEEEecCCCCeEecCCeeEeCCCcEEEEEecCCCCEeEECCEEcCCCCceEEEEEecCcccCCceEEEEEEcCCC
Confidence 11 1134599999999721 01223689999999999999999997654
No 246
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.95 E-value=2.7e-09 Score=68.69 Aligned_cols=72 Identities=14% Similarity=0.230 Sum_probs=47.5
Q ss_pred hhhccceeeEEeecCC---CccEEEEecCCCCcccccccceEEEec---CCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDE---DIPVYIWYDSYPTHEAEEYKGRISRVD---KESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~---p~p~~~w~k~~~~~~~~~~~~R~~~~~---~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|.+.|. |.|.+.|||++...+......++.+.. ........+|+|.+++.+|+|.|+|++.+
T Consensus 19 V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn 96 (126)
T 2dav_A 19 VKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTY 96 (126)
T ss_dssp EETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEEC
T ss_pred EeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEe
Confidence 3467788889998764 899999999752111111012233211 00112368999999999999999999975
No 247
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.95 E-value=5.8e-10 Score=78.90 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=46.6
Q ss_pred hhhccceeeEEeecCC---Ccc-EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDE---DIP-VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~---p~p-~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|.+.|. |.+ .+.||+++..... ..........+..-....+|.|.+++.+|+|.|+|++.+
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~-~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~ 103 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHT-AQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNS 103 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECC-CEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccC-cccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEec
Confidence 4567889999999875 776 8999998753211 111000011100001256899999999999999999964
No 248
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.95 E-value=1.7e-09 Score=65.70 Aligned_cols=66 Identities=20% Similarity=0.190 Sum_probs=49.4
Q ss_pred hhhccceeeEEeecCC-CccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDE-DIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~-p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|.+.|. |.|.+.||+++... .. ..|..+... .+..+|.|.+++.+|+|.|.|.+.+
T Consensus 13 v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~-~~--~~~~~~~~~---~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (97)
T 2bk8_A 13 GEEGGHVKYVCKIENYDQSTQVTWYFGVRQL-EN--SEKYEITYE---DGVAILYVKDITKLDDGTYRCKVVN 79 (97)
T ss_dssp ECTTCCEEEEEEEESCCTTCEEEEEETTEEC-CS--SSSEEEEEE---TTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EcCCCcEEEEEEEeccCCCCEEEEEECCEEC-cC--CCCEEEEEc---CCeEEEEEecCChhhCeEEEEEEEC
Confidence 4556788899999997 99999999997532 21 234433211 2356899999999999999999975
No 249
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.95 E-value=3.6e-09 Score=74.88 Aligned_cols=68 Identities=15% Similarity=0.154 Sum_probs=45.8
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC--------------Ccccccccc-eEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP--------------THEAEEYKG-RISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~--------------~~~~~~~~~-R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
++..+..+.+-|.+.+.+.+.+.||+... ......+.+ |+.+..+ .... |.|.+++.+|+|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~-L~I~~v~~~DsG 87 (253)
T 3to4_D 12 LVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRV---TDTE-LRLQVANMSQGR 87 (253)
T ss_dssp EEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECC---SSSC-CEEEEESCSSCE
T ss_pred EEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeC---CCCe-EEEccCChhhCe
Confidence 34567778888887777777888887321 111122344 7776432 1122 999999999999
Q ss_pred EEEEEEE
Q psy534 72 WYECKVV 78 (145)
Q Consensus 72 ~Y~C~~~ 78 (145)
.|+|.+.
T Consensus 88 ~Y~C~~~ 94 (253)
T 3to4_D 88 TLYCTSS 94 (253)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999986
No 250
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.94 E-value=3.6e-09 Score=75.10 Aligned_cols=102 Identities=15% Similarity=0.036 Sum_probs=68.6
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-------
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR------- 82 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------- 82 (145)
.+.++.+.|.+. |.|.+.| ++... . . ......|.|..+..+|.|.|.|.+.+...
T Consensus 112 ~G~~v~l~C~~~--p~~~i~W--~g~~~-~--~-----------~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s 173 (265)
T 2oz4_A 112 EGTEVTVKCEAH--PRAKVTL--NGVPA-Q--P-----------LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKN 173 (265)
T ss_dssp TTCEEEEEEECC--TTSEEEE--SSCSS-S--C-----------CSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEE
T ss_pred CCCcEEEEEEcc--CCCEEEE--CCEEc-c--C-----------CCCcEEEEEccccccCCceEEEEEEcCCCCCccccc
Confidence 356777888777 8899999 44331 1 0 12367789999999999999999964210
Q ss_pred ---------C--------CC--CCCCCcEEEEEEeE---------EecCCc----EEEEcccCCCCCeeeEEEEecCCC
Q psy534 83 ---------S--------PN--SHKNGTWFHLDVHG---------VFNDGT----ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 83 ---------~--------~~--~~~~g~~~~l~c~~---------~~~~~~----~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ +. ....|+.+.|.|.. +..++. ...+..++.+|+|.|+|.|.|..|
T Consensus 174 ~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~g~~~~v~~~d~G~Y~C~a~N~~G 252 (265)
T 2oz4_A 174 QTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEGTYLCRARSTQG 252 (265)
T ss_dssp EEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCEECCGGGCEEEEEEEEETTE
T ss_pred ccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCCCcEEEeehhhCeEEEEEEECCCC
Confidence 0 11 12458899999981 111211 011234888999999999999998
No 251
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.94 E-value=2.4e-09 Score=75.18 Aligned_cols=70 Identities=13% Similarity=0.017 Sum_probs=49.1
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC-C-c------------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP-T-H------------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~-~------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
+..+..+.+-|-+. .+.+.+.||++.. . . ....+.+|+.+..+ ..++++|.|.+++.+|+|.|
T Consensus 11 v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~--~~~~~~L~I~~v~~~D~G~Y 87 (238)
T 1bec_A 11 AVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRP--SQEQFSLILELATPSQTSVY 87 (238)
T ss_dssp EETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECC--SSSEEEEEESSCCGGGCEEE
T ss_pred EeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEec--CCCEEEEEEecCCcccCEEE
Confidence 45677788888874 3577889988641 1 0 01134677776432 24578999999999999999
Q ss_pred EEEEEEe
Q psy534 74 ECKVVFL 80 (145)
Q Consensus 74 ~C~~~~~ 80 (145)
+|.+.+.
T Consensus 88 ~C~~~~~ 94 (238)
T 1bec_A 88 FCASGGG 94 (238)
T ss_dssp EEEEESC
T ss_pred EEEEecC
Confidence 9999753
No 252
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=2e-09 Score=67.84 Aligned_cols=66 Identities=15% Similarity=0.115 Sum_probs=49.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|.+.|.|.|.+.|++++... . .+|..+.. .....+|.|.+++.+|+|.|.|.+.+.
T Consensus 36 v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l-~---~~~~~~~~---~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 101 (118)
T 2e7c_A 36 RKVGEQLNLVVPFQGKPRPQVVWTKGGAPL-D---TSRVHVRT---SDFDTVFFVRQAARSDSGEYELSVQIE 101 (118)
T ss_dssp EESSSCEEEEEEEEEESCCEEEEEETTEEC-C---CSSCEEEE---CSSEEEEEESSCCTTTCEEEEEEEECS
T ss_pred EECCCEEEEEEEEccCCCCEEEEEECCEEC-C---CCcEEEEE---CCCeEEEEECCCChhcCEEEEEEEEeC
Confidence 345677888999999999999999997542 2 13333321 133677999999999999999999753
No 253
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.93 E-value=3.7e-09 Score=66.61 Aligned_cols=69 Identities=17% Similarity=0.213 Sum_probs=51.2
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|.+.|.|.|.+.|++++..... -..|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+.
T Consensus 27 v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~--~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 95 (116)
T 2kkq_A 27 VLEGDSVKLECQISAIPPPKLFWKRNNEMVQF--NTDRISLYQD--NTGRVTLLIKDVNKKDAGWYTVSAVNE 95 (116)
T ss_dssp EETTEEEEEEEEBCCBSCCEEEEEETTEECCC--CBTTEEEEEC--TTCEEEEEEEEECGGGCEEEEEEEEET
T ss_pred EeCCCcEEEEEEEeccCCCEEEEEECCEECcC--CCCeEEEEeC--CCCeEEEEECCCCcccCEEEEEEEEcC
Confidence 44667888999999999999999999854221 1345555432 123458999999999999999999753
No 254
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.92 E-value=3e-09 Score=64.48 Aligned_cols=61 Identities=13% Similarity=0.103 Sum_probs=47.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|.+.|.| |.+.|+|++... . ..+|+.+ .+.+|.|.+++.+|+|.|.|.+.+
T Consensus 21 v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~-~--~~~~~~~-------~~~~L~i~~~~~~D~G~Y~C~a~n 81 (95)
T 2ckn_A 21 VHPGDLLQLRCRLRDDV-QSINWLRDGVQL-V--ESNRTRI-------TGEEVEVRDSIPADSGLYACVTSS 81 (95)
T ss_dssp ECTTSCEEEECCEESSC-CEEEEEBTTBCC-C--CCSSEEE-------CSSEEEESSCCGGGSEEEEEEEEE
T ss_pred EcCCCeEEEEEECCCCC-CceEEEECCEec-C--CCCCEEE-------eCCEEEECCCChHHCEEEEEEecc
Confidence 34567788889998988 899999987542 2 2345544 167899999999999999999975
No 255
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.92 E-value=3.9e-09 Score=73.99 Aligned_cols=72 Identities=6% Similarity=-0.065 Sum_probs=46.4
Q ss_pred HhhhccceeeEEeecC-CCc-c-EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADD-EDI-P-VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g-~p~-p-~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
....+..+.+.|.+.| .|. | .+.|++++...... .........+..-....+|.|.+++.+|+|.|+|.+.+
T Consensus 24 ~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~-~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~ 98 (231)
T 2w59_A 24 ELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRP-DPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQH 98 (231)
T ss_dssp HHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCC-CCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred hcccCCceEEEEEEeCccCCCCeEEEEEcCCeecccc-ccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEc
Confidence 3457788999999987 464 5 99999887543111 11111110100001245799999999999999999965
No 256
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.91 E-value=5.2e-09 Score=73.25 Aligned_cols=72 Identities=13% Similarity=0.136 Sum_probs=49.9
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCCC---Cc-c----------c-ccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSYP---TH-E----------A-EEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~~-~----------~-~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
++..+..+.+-|.+.+. +.+.+.||+... .. + . ..+.+|+.+..+ ...++.+|.|.+++.+|
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~D 90 (230)
T 1ypz_F 12 SRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKN-PSASTSILTIYSLEEED 90 (230)
T ss_dssp EEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEEC-CTTTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEc-CCCCEEEEEECcCChhh
Confidence 34567778888888764 556788887531 10 0 0 115688887542 23357899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 91 ~G~Y~C~~~~ 100 (230)
T 1ypz_F 91 EAIYYCSYGE 100 (230)
T ss_dssp CSEEEEEECC
T ss_pred CEEEEEEEEC
Confidence 9999999864
No 257
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.91 E-value=8.2e-10 Score=68.61 Aligned_cols=66 Identities=15% Similarity=0.144 Sum_probs=50.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|.+.|.|.|.+.|++++... . ...|+.+... ....+|.|.+++.+|+|.|.|.+.+
T Consensus 26 v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l-~--~~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 26 VYEGESARFSCDTDGEPVPTVTWLRKGQVL-S--TSARHQVTTT---KYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp ESSSSCEECCEEEECSSCCBCCBCSSSSCC-T--TCSSEEEEEC---SSEEEEEECCCCSSCCSEEEECCBC
T ss_pred EeCCCcEEEEEEEEEcCCCEEEEEECCEEC-C--CCCCEEEEEC---CCEEEEEECcCCchhCEEEEEEEEe
Confidence 345677888899999999999999987542 2 2234444321 3478999999999999999999875
No 258
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.90 E-value=2.4e-09 Score=65.97 Aligned_cols=66 Identities=21% Similarity=0.131 Sum_probs=49.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|.+.|.|.|.+.|++++.. +. ...|+.+..+ ....+|.|.+++.+|+|.|.|.+.+
T Consensus 25 v~~G~~v~l~C~~~g~p~p~i~W~~~~~~-~~--~~~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 25 VVSGAEAELKCVVLGEPPPVVVWEKGGQQ-LA--ASERLSFPAD---GAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEE-CC--CCSSEECCEE---TTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred EeCCCeEEEEEEEeecCCCEEEEEECCeE-CC--CCCcEEEEeC---CCEEEEEEccCCHHhCEEEEEEEEc
Confidence 34567788889999999999999998743 22 2234444221 2244899999999999999999975
No 259
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.90 E-value=1.9e-09 Score=66.52 Aligned_cols=64 Identities=25% Similarity=0.420 Sum_probs=44.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|-+.|.|.|.+.|++++.... . ..+..+. ..+.+|.|.+++.+|+|.|.|.+.+
T Consensus 22 v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~-~--~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~n 85 (108)
T 3kvq_A 22 TSIGESIEVSCTASGNPPPQIMWFKDNETLV-E--DSGIVLK-----DGNRNLTIRRVRKEDEGLYTCQACS 85 (108)
T ss_dssp EETTCCEEEECBCC----CCEEEEESSSBCC-C--BTTEEEE-----TTTTEEEECSCCGGGCEEEEEEEC-
T ss_pred EeCCCeEEEEEECcCcCCCeEEEEECCeEcc-c--CCCeEEe-----CCCcEEEEeecCcccCEEEEEEEEe
Confidence 3456778888999999999999999885422 1 2233332 2368899999999999999999964
No 260
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.89 E-value=2.7e-09 Score=68.93 Aligned_cols=74 Identities=14% Similarity=0.160 Sum_probs=51.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccc-------cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAE-------EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~-------~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|-+.|.|.|.+.|++++...... ....|+.+........+++|.|.+++.+|+|.|+|.+.+.
T Consensus 33 v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 112 (137)
T 3qr2_A 33 RWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASND 112 (137)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEEECC
T ss_pred EeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEEEec
Confidence 345677888999999999999999976432110 0123444322111234789999999999999999999875
Q ss_pred c
Q psy534 81 N 81 (145)
Q Consensus 81 ~ 81 (145)
.
T Consensus 113 ~ 113 (137)
T 3qr2_A 113 P 113 (137)
T ss_dssp T
T ss_pred C
Confidence 3
No 261
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.89 E-value=3.1e-10 Score=83.00 Aligned_cols=116 Identities=11% Similarity=0.121 Sum_probs=74.2
Q ss_pred cceeeEEeecCC-C-ccEEEEecCCCCcccccccceEEEecCCCC-CCeeeEEEcccCCCCCEEEEEEEEEecC------
Q psy534 12 QMLSVGDFADDE-D-IPVYIWYDSYPTHEAEEYKGRISRVDKESP-FGMASLNLTKIRESDQGWYECKVVFLNR------ 82 (145)
Q Consensus 12 ~~~~~~~w~~g~-p-~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~-~~~~sL~I~~v~~~D~G~Y~C~~~~~~~------ 82 (145)
.++.+.|-+.|. | .+.+.|+|++... ............+ .. .....|.|.++..+|+|.|+|++.+...
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l-~~~~~~~~~~~~~-g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 102 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVM-DVDLSTASTTQEG-ELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDST 102 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEEC-CGGGEEEEEEEET-TEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEc-ccceecCCcCccC-CcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceee
Confidence 478899999875 4 5789999987542 2111110011110 00 1145688888888999999999975320
Q ss_pred ----------------CCC--CCCCCcEEEEEEeE----------Ee---c-C----------------C-----cEEEE
Q psy534 83 ----------------SPN--SHKNGTWFHLDVHG----------VF---N-D----------------G-----TELRI 109 (145)
Q Consensus 83 ----------------~~~--~~~~g~~~~l~c~~----------~~---~-~----------------~-----~~L~i 109 (145)
++. ....|+.+.|.|.. .+ . + + ..|.|
T Consensus 103 ~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I 182 (323)
T 2wqr_A 103 KKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPV 182 (323)
T ss_dssp CCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEEC
T ss_pred ecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEE
Confidence 010 01248889999971 00 1 1 0 14889
Q ss_pred cccCCCCCeeeEEEEecCCC
Q psy534 110 SNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 110 ~~v~~~d~G~Y~C~a~n~~g 129 (145)
.+++.+|+|.|+|.|.|..+
T Consensus 183 ~~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 183 GTRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp CHHHHHTTCCEEEEEECTTS
T ss_pred CHHHccCCCCEEEEEECCCC
Confidence 99999999999999999864
No 262
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=1.9e-09 Score=65.69 Aligned_cols=64 Identities=16% Similarity=0.131 Sum_probs=48.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.|.|.|.+.|++++..... . .+ ... .+..+|.|.+++.+|+|.|.|.+.+.
T Consensus 23 v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~-~--~~-~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 23 VIEGQDFVLQCSVRGTPVPRITWLLNGQPIQY-A--RS-TCE-----AGVAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp ECTTCCEEEECEEEEESCCCCEEEESSSBCSS-C--CC-EEE-----TTEEEEEECSCCTTCCBCEEEEEECS
T ss_pred EeCCCeEEEEEEEeeeCCCeEEEEECCEECcc-c--ce-Eee-----CCeEEEEECCCChhhCEEEEEEEEEC
Confidence 34567788889999999999999998754221 1 11 111 34788999999999999999999753
No 263
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.89 E-value=5.8e-09 Score=67.52 Aligned_cols=72 Identities=22% Similarity=0.242 Sum_probs=51.3
Q ss_pred hhhccceeeEEeecCCC---ccEEEEecCCCC--------------cccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDED---IPVYIWYDSYPT--------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p---~p~~~w~k~~~~--------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+-|.+.+.+ .+.+.|+++... ...+.+.+|+.+..+....++.+|.|.+++.+|+
T Consensus 18 ~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 97 (139)
T 1pko_A 18 ALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSDE 97 (139)
T ss_dssp EETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGGGC
T ss_pred EEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCHHHC
Confidence 45567788889887543 368899887631 0123467888876543344578999999999999
Q ss_pred EEEEEEEEE
Q psy534 71 GWYECKVVF 79 (145)
Q Consensus 71 G~Y~C~~~~ 79 (145)
|.|+|.+.+
T Consensus 98 G~Y~C~v~~ 106 (139)
T 1pko_A 98 GGYTCFFRD 106 (139)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEc
Confidence 999999975
No 264
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.89 E-value=1.4e-08 Score=79.14 Aligned_cols=72 Identities=18% Similarity=0.199 Sum_probs=49.8
Q ss_pred HhhhccceeeEEeecCCCc----cEEEEecCC--C-Cc------------ccccccceEEEecCCCCCCeeeEEEcccCC
Q psy534 7 VKSIFQMLSVGDFADDEDI----PVYIWYDSY--P-TH------------EAEEYKGRISRVDKESPFGMASLNLTKIRE 67 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~----p~~~w~k~~--~-~~------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~ 67 (145)
.+..+..+.+-|.+.+.+. +.+.||++. . .. ....+.+|+.+..+ ...++.+|.|++++.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~ 89 (512)
T 1zvo_C 11 LVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVD-TSRNQFSLNLRSMSA 89 (512)
T ss_pred EEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEec-CCCCEEEEEECcCCH
Confidence 3456777888888876532 668888753 1 10 12235678887543 233478999999999
Q ss_pred CCCEEEEEEEEE
Q psy534 68 SDQGWYECKVVF 79 (145)
Q Consensus 68 ~D~G~Y~C~~~~ 79 (145)
+|+|.|+|.+.+
T Consensus 90 ~Dsg~Y~C~~~~ 101 (512)
T 1zvo_C 90 ADTAMYYCARGN 101 (512)
T ss_pred HHCEEEEEEEEC
Confidence 999999999864
No 265
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=3e-09 Score=67.75 Aligned_cols=72 Identities=18% Similarity=0.196 Sum_probs=47.4
Q ss_pred hhhccceeeEEeecCC---CccEEEEecCCCCcccccccceEEEec--C-CCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDE---DIPVYIWYDSYPTHEAEEYKGRISRVD--K-ESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~---p~p~~~w~k~~~~~~~~~~~~R~~~~~--~-~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|-+.|. |.|.+.|||++-..+......++.+.. + .......+|+|.+++++|+|.|+|++.+
T Consensus 24 V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn 101 (118)
T 2edn_A 24 VETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKA 101 (118)
T ss_dssp EETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEEC
T ss_pred EeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEE
Confidence 3456778888988765 799999999852211111112233211 0 0111368999999999999999999975
No 266
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.87 E-value=2.7e-09 Score=64.79 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=45.4
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
..+..+.+.|-..+ |.|.+.|+|++... .. ..|+.+..+ ....+|.|.+++.+|+|.|.|.|.
T Consensus 19 ~~g~~v~l~C~v~~-p~~~v~W~k~g~~i-~~--~~~~~i~~~---~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 19 ITSECVMLACEVDR-EDAPVRWYKDGQEV-EE--SDFVVLENE---GPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CTTCCEEEEEECSC-TTSCCEEEETTSCC-CC--CSSCEEEEE---TTEEEEEESSCCGGGCSEEEEECS
T ss_pred ECCCcEEEEEEECC-CCcEEEEEECCEEe-ee--eeeeeEEec---CCeEEEEeCCCChhhcEEEEEEEc
Confidence 35667788888755 77889999998653 22 233333321 235689999999999999999884
No 267
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=5.9e-09 Score=63.70 Aligned_cols=62 Identities=15% Similarity=0.110 Sum_probs=47.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|-+.|.| |.+.|+|++... . ...|+.+. ..+|.|.+++.+|+|.|.|.+.+.
T Consensus 15 v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~-~--~~~~~~~~-------~~~L~i~~v~~~D~G~Y~C~a~n~ 76 (99)
T 2cr3_A 15 VHPGDLLQLRCRLRDDV-QSINWLRDGVQL-A--ESNRTRIT-------GEEVEVQDSVPADSGLYACVTSSP 76 (99)
T ss_dssp BCTTSCEEEECCCCSSC-CEEEEEESSSBC-C--CCSSEEEC-------SSEEEETTCCTTTCEEEEEEEEET
T ss_pred EeCCCcEEEEEEecCCC-CeEEEEECCEEC-C--CCCcEEEE-------CCEEEEccCCHHHCEEEEEEEEeC
Confidence 45677888899888887 799999998542 1 22344441 568999999999999999999753
No 268
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.87 E-value=7.1e-09 Score=64.34 Aligned_cols=70 Identities=17% Similarity=0.205 Sum_probs=52.0
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+..+.+-|.+.+.|.+.+.||++.. .. + ...+.+|+.+.. .....+|.|.+++.+|+|.|+|
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~DsG~Y~C 88 (108)
T 1jhl_L 12 VASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSG---SGTDFTLTISSLEPEDFAMYIC 88 (108)
T ss_dssp EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---SSSEEEEEECSCCTTCCSEEEE
T ss_pred EEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEe---cCCEEEEEECCCCHHHCEEEEE
Confidence 45677889999999998888999998642 10 0 112356766532 2346889999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 89 ~~~n 92 (108)
T 1jhl_L 89 QQHN 92 (108)
T ss_dssp EECS
T ss_pred EEcc
Confidence 9974
No 269
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.87 E-value=5.1e-09 Score=65.09 Aligned_cols=67 Identities=19% Similarity=0.268 Sum_probs=44.2
Q ss_pred hhccceeeEEeecCCCcc-----EEEEecCCCC-------------cccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 9 SIFQMLSVGDFADDEDIP-----VYIWYDSYPT-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p-----~~~w~k~~~~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
..+..+.+-|.+.+.|.+ .+.|+++... ...+.|++|+.+.. .+.+|.|.+++.+|+
T Consensus 7 ~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~sL~I~~v~~~D~ 81 (110)
T 1ncn_A 7 YFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDS-----DSWTLRLHNLQIKDK 81 (110)
T ss_dssp ETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEET-----TTTEEEECSCCGGGC
T ss_pred EeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEEC-----CCEEEEEcCCChHHC
Confidence 345556666665543322 3666665321 12345778887743 268999999999999
Q ss_pred EEEEEEEEEe
Q psy534 71 GWYECKVVFL 80 (145)
Q Consensus 71 G~Y~C~~~~~ 80 (145)
|.|+|.+.+.
T Consensus 82 G~Y~C~v~~~ 91 (110)
T 1ncn_A 82 GLYQCIIHHK 91 (110)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEcC
Confidence 9999999754
No 270
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.86 E-value=3.1e-08 Score=76.08 Aligned_cols=117 Identities=13% Similarity=0.015 Sum_probs=76.3
Q ss_pred hccceeeEEeecCC-Cc-c-EEEEecCCCCcccccccceEEEe-cCCCC-CCeeeEEEcccCCCCCEEEEEEEEEecC--
Q psy534 10 IFQMLSVGDFADDE-DI-P-VYIWYDSYPTHEAEEYKGRISRV-DKESP-FGMASLNLTKIRESDQGWYECKVVFLNR-- 82 (145)
Q Consensus 10 ~~~~~~~~~w~~g~-p~-p-~~~w~k~~~~~~~~~~~~R~~~~-~~~~~-~~~~sL~I~~v~~~D~G~Y~C~~~~~~~-- 82 (145)
.+.++.+.|.+.|. |. | .+.|++++.. .. ........ ..+.. .....|.|..+..+|+|.|.|++.+...
T Consensus 140 ~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~-~~--~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 216 (475)
T 1iga_A 140 PDGNVVIACLVQGFFPQEPLSVTWSESGQG-VT--ARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 216 (475)
T ss_pred CCCeEEEEEEEeeecCCCceEEEEcCCCcc-cc--eEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCc
Confidence 56678899999986 66 5 8999988632 11 00000000 00000 0135689999999999999999965421
Q ss_pred -----------------------------CCC-----C----CCCCcEEEEEEeEEe--c--------------------
Q psy534 83 -----------------------------SPN-----S----HKNGTWFHLDVHGVF--N-------------------- 102 (145)
Q Consensus 83 -----------------------------~~~-----~----~~~g~~~~l~c~~~~--~-------------------- 102 (145)
.+. + ...|+.+.|.|.... .
T Consensus 217 ~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W~~~~~~~~~~~~ 296 (475)
T 1iga_A 217 QDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVQGP 296 (475)
T ss_pred eeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEECCCCcCCccccC
Confidence 010 0 145889999998210 0
Q ss_pred -----CC-----cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 -----DG-----TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 -----~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
++ ..|.|.+++.+|+|.|+|.|.|..|
T Consensus 297 ~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~ 333 (475)
T 1iga_A 297 PERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPES 333 (475)
T ss_pred ceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCC
Confidence 11 1488999999999999999999988
No 271
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.86 E-value=2.3e-08 Score=70.87 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=73.7
Q ss_pred hhccceeeEEeecC-CCcc--EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEccc---CCCCCEE--EEEEEEEe
Q psy534 9 SIFQMLSVGDFADD-EDIP--VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKI---RESDQGW--YECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g-~p~p--~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v---~~~D~G~--Y~C~~~~~ 80 (145)
..+.++.+.|-+.| .|.| .+.|++++.. +. .++.. ....|.|..+ +.+|+|. |+|.+.+.
T Consensus 16 ~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~-l~----~~~~~-------~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~ 83 (265)
T 2oz4_A 16 EVDTQGTVVCSLDGLFPVSEAQVHLALGDQR-LN----PTVTY-------GNDSFSAKASVSVTAEDEGTQRLTCAVILG 83 (265)
T ss_dssp ETTEEEEEEEEEESCSCGGGCEEEEEETTEE-CC----CEEEE-------CSSEEEEEEEEEECGGGCEEEEEEEEEEET
T ss_pred ecCCCEEEEEEccCCCCCcceEEEEEeCCEE-CC----ceEee-------CCCeEEEEeecccccccCCcceEEEEEecC
Confidence 45778889999998 7887 9999999853 21 12222 1345666555 7888885 99999653
Q ss_pred c----------C--CCC--------CCCCCcEEEEEEeEE------e--------cCCcEEEEcccCCCCCeeeEEEEec
Q psy534 81 N----------R--SPN--------SHKNGTWFHLDVHGV------F--------NDGTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 81 ~----------~--~~~--------~~~~g~~~~l~c~~~------~--------~~~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
. + .+. ....|+.+.|.|... . .....|.|..+..+|.|.|+|.|.|
T Consensus 84 ~~~~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~p~~~i~W~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n 163 (265)
T 2oz4_A 84 NQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATL 163 (265)
T ss_dssp TEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECCTTSEEEESSCSSSCCSSEECCEEECCGGGTTEEEEEEEEE
T ss_pred CCCcEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEccCCCEEEECCEEccCCCCcEEEEEccccccCCceEEEEEEc
Confidence 2 1 111 123599999999721 1 0113478888889999999999986
Q ss_pred CC-C
Q psy534 127 VL-Y 129 (145)
Q Consensus 127 ~~-g 129 (145)
.. |
T Consensus 164 ~~~g 167 (265)
T 2oz4_A 164 EVAG 167 (265)
T ss_dssp ECSS
T ss_pred CCCC
Confidence 54 5
No 272
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=2.3e-09 Score=66.42 Aligned_cols=68 Identities=13% Similarity=0.112 Sum_probs=48.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|.+.|.|.|.+.|++++... ......+... . ..+..+|.|.+++.+|+|.|+|.+.+.
T Consensus 21 v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~-~~~~~~~~~~-~---~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 88 (110)
T 2dm3_A 21 VQEGKLCRMDCKVSGLPTPDLSWQLDGKPV-RPDSAHKMLV-R---ENGVHSLIIEPVTSRDAGIYTCIATNR 88 (110)
T ss_dssp EESSSCBCCEEEEECSSCCEEECBBSSSBC-CCCSSEEEEE-C---TTSCEEEEESSCCGGGCSBBCEEEECS
T ss_pred EeCCCEEEEEEEEEEcCCCEEEEEECCEEC-CCCCceEEEE-e---cCCeEEEEEeeCCcccCEEEEEEEECC
Confidence 345677888899999999999999987542 2221112221 1 123568999999999999999999753
No 273
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.85 E-value=3.9e-09 Score=63.45 Aligned_cols=58 Identities=19% Similarity=0.134 Sum_probs=46.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.|.|.|.+.|++++... . .....+|.|.+++.+|+|.|.|.+.+.
T Consensus 15 v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~-~--------------~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 15 LMPGSTLVLQCVAVGSPIPHYQWFKNELPL-T--------------HETKKLYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp ECTTSCEEEECEEECSSCCEEEEEETTEEC-T--------------TCCSSEEEESSCCGGGCEEEEEEEECS
T ss_pred ecCCCcEEEEEEeccCCCCEEEEEcCCeeC-C--------------cCCCCeEEECCCCHHhCEEEEEEEEcC
Confidence 446778889999999999999999987431 1 012568999999999999999999853
No 274
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.85 E-value=9.9e-09 Score=64.23 Aligned_cols=73 Identities=11% Similarity=0.064 Sum_probs=52.5
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC-Cccc--------ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP-THEA--------EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~~~~--------~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
.+..+.++.+-|.+.+.+ +.+.||+... .... ....+|+.+..+.....+.+|.|.+++.+|+|.|+|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 90 (113)
T 1h5b_A 12 SLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAA 90 (113)
T ss_dssp EEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEE
T ss_pred EEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEEEEEEE
Confidence 356778899999998765 6799998652 1100 22467777654322456789999999999999999999
Q ss_pred EEe
Q psy534 78 VFL 80 (145)
Q Consensus 78 ~~~ 80 (145)
.+.
T Consensus 91 ~n~ 93 (113)
T 1h5b_A 91 EAS 93 (113)
T ss_dssp ECS
T ss_pred ecC
Confidence 753
No 275
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.85 E-value=3.6e-09 Score=65.37 Aligned_cols=66 Identities=17% Similarity=0.098 Sum_probs=48.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.+.|.+ +.|||++... . ...|+.+..+ ....+|.|.+++.+|+|.|.|.+.+.
T Consensus 20 v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~-~--~~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 20 VKAAEQAVFKCEVSDEKVT-GKWYKNGVEV-R--PSKRITISHV---GRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp EESSCCEECCCEESCSSCE-EEEEESSCBC-C--CCSSCEEEEE---TTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred EeCCCeEEEEEEEcCCCcc-eEEEcCCEEC-c--CCCCEEEEEe---CCEEEEEECCCCcCCCEEEEEEEccC
Confidence 3456777888999998888 9999998542 2 1234444221 22568999999999999999999754
No 276
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.85 E-value=1.1e-08 Score=64.38 Aligned_cols=66 Identities=11% Similarity=0.050 Sum_probs=45.4
Q ss_pred ceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 13 MLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 13 ~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.|.+.|.|.|.+.|+|++... ...-..++..... .....++|.|.+++.+|+|.|.|.|.+.
T Consensus 22 ~~~l~C~~~g~P~p~i~W~k~g~~l-~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~N~ 87 (118)
T 1wwc_A 22 EHCIEFVVRGNPPPTLHWLHNGQPL-RESKIIHVEYYQE-GEISEGCLLFNKPTHYNNGNYTLIAKNP 87 (118)
T ss_dssp EEEEEEEEECSSCCEEEEEETTEEC-CCSSSEEEEEEEC-SSEEEEEEEEESCCGGGCEEEEEEEEET
T ss_pred ceEEEEEeeeeCCCeEEEEECCEEC-CCCCceeEEEecc-CccccEEEEECCCChhcCEEEEEEEECC
Confidence 3456688899999999999998542 2221122222111 1123678999999999999999999763
No 277
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=98.83 E-value=1.8e-08 Score=72.11 Aligned_cols=38 Identities=18% Similarity=0.384 Sum_probs=29.8
Q ss_pred ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 40 EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 40 ~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
..+++|+.+..+ ...++.+|.|.+++.+|+|.|+|.+.
T Consensus 85 ~~~~~R~~~~~~-~~~~~~sL~I~~v~~~DsG~Y~C~~~ 122 (267)
T 3u1s_H 85 QKFQGRVTITRD-SGASTVYMELRGLTADDTAIYYCLTG 122 (267)
T ss_dssp GGGTTTEEEEEC-GGGCCEEEEECSCCGGGCEEEEEEEE
T ss_pred cccCCcEEEEEc-CCCCEEEEEECCCChhhCEEEEEEEC
Confidence 456788887543 23357789999999999999999985
No 278
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.83 E-value=6.6e-10 Score=84.33 Aligned_cols=121 Identities=12% Similarity=0.071 Sum_probs=75.2
Q ss_pred hhhccceeeEEeecCCC----ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-
Q psy534 8 KSIFQMLSVGDFADDED----IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p----~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~- 82 (145)
...+.++.+.|-+.|.+ .+.+.|++++..... ..........+......++|.|.+++.+|+|.|.|.+.+...
T Consensus 242 v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 320 (434)
T 1igy_B 242 LLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHT-AQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFP 320 (434)
T ss_dssp HSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCC-CSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCS
T ss_pred cccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCC-cccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCC
Confidence 56678889999999873 357999999854221 111111111110111256799999999999999999965321
Q ss_pred ---------------CCC--------CCCCCcEEEEEEeEE-----------e-----------------cCC-----cE
Q psy534 83 ---------------SPN--------SHKNGTWFHLDVHGV-----------F-----------------NDG-----TE 106 (145)
Q Consensus 83 ---------------~~~--------~~~~g~~~~l~c~~~-----------~-----------------~~~-----~~ 106 (145)
+|. ....+..+.|.|... . .++ ..
T Consensus 321 ~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~ 400 (434)
T 1igy_B 321 APIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSK 400 (434)
T ss_dssp SCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEE
T ss_pred CceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEE
Confidence 110 112466799999810 0 011 13
Q ss_pred EEEcccCCCCCeeeEEEEecCCC
Q psy534 107 LRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 107 L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
|.|.....+|.|.|+|.|.|...
T Consensus 401 l~i~~~~~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 401 LNVQKSNWEAGNTFTCSVLHEGL 423 (434)
T ss_dssp EEEEHHHHHTTCCEEEEEEETTS
T ss_pred EEECchhccCCCEEEEEEEcCCC
Confidence 45555556679999999999864
No 279
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.82 E-value=1.8e-08 Score=61.83 Aligned_cols=70 Identities=17% Similarity=0.185 Sum_probs=51.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCccc-----ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEA-----EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~-----~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|-+.+.|.+.+.|++++...+. ....+|+.+... ...+.+|.|.+++.+|+|.|+|.+.+
T Consensus 18 v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n 92 (108)
T 3m45_A 18 VVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRA--SWHELSISVSDVSLSDEGQYTCSLFT 92 (108)
T ss_dssp EETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEE--SSSEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeec--CCCcEEEEECCCChhHCeEEEEEEEc
Confidence 34567788899999999999999998642111 112346655321 12578999999999999999999974
No 280
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.82 E-value=9.4e-09 Score=62.44 Aligned_cols=61 Identities=15% Similarity=0.065 Sum_probs=46.1
Q ss_pred hhhccceeeEEeec-CCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFAD-DEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~-g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|-+. |.|.+.+.|++++.... . .+... .+++|.|.+++.+|+|.|.|.+.+
T Consensus 22 v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~-~---~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~n 83 (98)
T 1gl4_B 22 VRPGADVTFICTAKSKSPAYTLVWTRLHNGKL-P---SRAMD-------FNGILTIRNVQPSDAGTYVCTGSN 83 (98)
T ss_dssp ECTTCCEEEEEEEEESSSCCEEEEEEGGGBCC-C---TTEEE-------ETTEEEECSCCGGGCEEEEEEEEC
T ss_pred EecCCCEEEEEeCCCCCCCcEEEEEeCCCCCC-C---ceeec-------CCCEEEEeCCChhhCEEEEEEecC
Confidence 45677888899998 78999999999753211 1 11111 267899999999999999999975
No 281
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.81 E-value=1.4e-08 Score=67.01 Aligned_cols=68 Identities=16% Similarity=0.158 Sum_probs=50.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|.+.|.|.|.+.|||++... .. ..|+.+... ..+..+|.|.+++.+|+|.|+|.+.+.
T Consensus 53 v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~-~~--~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 120 (154)
T 1fhg_A 53 VVEGSAARFDCKVEGYPDPEVMWFKDDNPV-KE--SRHFQIDYD--EEGNCSLTISEVCGDDDAKYTCKAVNS 120 (154)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEEC-CC--SSSEEEEEC--TTCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred EeCCCeEEEEEEEEEecCCEEEEEECCEEC-CC--CCcEEEEEC--CCCeEEEEECCCChhcCEEEEEEEEEC
Confidence 345667888899999999999999998542 21 233433211 123679999999999999999999753
No 282
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=65.15 Aligned_cols=70 Identities=11% Similarity=0.083 Sum_probs=50.6
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCccc-----ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEA-----EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~-----~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|-+.+.|.+.+.|++.+...+. ....+|+.+... .....+|.|.+++.+|+|.|+|.+.+
T Consensus 13 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~a~n 87 (124)
T 3rbg_A 13 VEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH--SANQLSITVPNVTLQDEGVYKCLHYS 87 (124)
T ss_dssp EETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEE--ETTEEEEEESSCCGGGCEEEEEEEES
T ss_pred EcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeC--CCCEEEEEECCCChHHCEEEEEEEEc
Confidence 45678899999999999999999976543211 012344444221 13468999999999999999999974
No 283
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.79 E-value=1e-08 Score=62.32 Aligned_cols=64 Identities=8% Similarity=-0.159 Sum_probs=45.3
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+..+.+.|-..+. .|.+.|||++.. +.. ..|+.+..+ ....+|.|.+++.+|+|.|+|.+.+
T Consensus 18 ~~G~~v~l~C~v~~~-~~~v~W~k~g~~-i~~--~~~~~i~~~---g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 18 FVGETAHFEIELSEP-DVHGQWKLKGQP-LAA--SPDCEIIED---GKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp ETTSCEEEEEEESSS-SCCCEEEETTEE-CCC--BTTEEEEEE---TTEEEEEECSCCGGGCEEEEEEETT
T ss_pred eCCCCEEEEEEECCC-CCeEEEEECCEE-CcC--CCCEEEEEE---CCEEEEEECCCChhhCEEEEEEECC
Confidence 456677788888764 477999999854 222 234444321 2356899999999999999999853
No 284
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.79 E-value=1.4e-08 Score=69.71 Aligned_cols=68 Identities=22% Similarity=0.374 Sum_probs=49.5
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+.++.+.|.+.|.|.|.+.|++++..........|+..... .....|.|.+++.+|+|.|+|.|.+.
T Consensus 122 ~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~N~ 189 (212)
T 2yd6_A 122 RTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRS---ESIGALQIEQSEESDQGKYECVATNS 189 (212)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEE---TTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEec---CCeEEEEEcCCCcccCEEEEEEEECC
Confidence 456788889999999999999999854332223345554321 23689999999999999999999864
No 285
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.79 E-value=9.2e-08 Score=66.68 Aligned_cols=61 Identities=11% Similarity=-0.014 Sum_probs=46.7
Q ss_pred hhhccceeeEEeecCCCcc--EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIP--VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p--~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+-|-+ |.|.| .+.|++.+.. + +++.+. .....|.|.+|+.+|+|.|.|.+.+.
T Consensus 19 v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~-----l-~~~~~~-----~~~~~L~I~~v~~~d~G~Y~C~a~n~ 81 (210)
T 1gsm_A 19 VALGASRQLTCRL-ACADRGASVQWRGLDTS-----L-GAVQSD-----TGRSVLTVRNASLSAAGTRVCVGSCG 81 (210)
T ss_dssp EETTCCEEEEEEE-CCSSTTCEEEEESSTTT-----T-CCEEEE-----SSEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EeCCCCEEEEEEC-CCCCCCcceEEeecccc-----c-CcEEec-----CCccEEEECccCcccCceEEEEEEeC
Confidence 3456778888999 88888 9999986532 1 344432 34788999999999999999999653
No 286
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.78 E-value=8e-09 Score=64.26 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=47.2
Q ss_pred hhhccceeeEEee-cCCCccEEEEecCCCC------------cccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 8 KSIFQMLSVGDFA-DDEDIPVYIWYDSYPT------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 8 ~~~~~~~~~~~w~-~g~p~p~~~w~k~~~~------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
+..+..+.+-|.+ .+.+.+.+.||+.... .....+++|+.+. ..+++|.|.+++.+|+|.|.
T Consensus 15 ~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~-----~~~~sL~I~~v~~~DsG~Y~ 89 (110)
T 2ptt_A 15 AYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLE-----ENNGALHISNVRKEDKGTYY 89 (110)
T ss_dssp EETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEEC-----TTTCCEEESSCCGGGCEEEE
T ss_pred EecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEe-----CCCccEEECCCCcccCeEEE
Confidence 4456677777777 4666678888873221 1123466788763 25789999999999999999
Q ss_pred EEEE
Q psy534 75 CKVV 78 (145)
Q Consensus 75 C~~~ 78 (145)
|.+.
T Consensus 90 C~v~ 93 (110)
T 2ptt_A 90 MRVL 93 (110)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 287
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=1.1e-08 Score=62.95 Aligned_cols=63 Identities=13% Similarity=0.021 Sum_probs=46.5
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+..+.+.|-+ .|.|.+.|||++.. +. ...|+.+..+ ....+|.|.+++.+|+|.|.|.+.+
T Consensus 20 ~~G~~v~l~C~v--~p~p~v~W~k~g~~-l~--~~~r~~i~~~---~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 20 NLGKEICLKCEI--SENIPGKWTKNGLP-VQ--ESDRLKVVQK---GRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp ETTSCCCEEEEC--SSCCCEEEEETTEE-CC--CCSSEEEEEC---SSEEEEEESSCCGGGCSEEEEEESS
T ss_pred cCCCCEEEEEEe--CCCCeEEEEECCEE-CC--CCCcEEEEEe---CCEEEEEECCCChhhCEEEEEEEcC
Confidence 456677788888 78889999999854 22 2245544321 2356899999999999999999975
No 288
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=8.7e-09 Score=63.27 Aligned_cols=65 Identities=17% Similarity=0.162 Sum_probs=47.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|.+.|.|.+ +.|||++.. +.. ..|+.+..+ .....|.|.+++.+|+|.|.|.+.+
T Consensus 22 v~~G~~v~l~C~~~~~p~~-v~W~k~g~~-~~~--~~~~~~~~~---~~~~~L~I~~~~~~D~G~Y~C~a~n 86 (104)
T 2e6p_A 22 FTTSERVVLTCELSRVDFP-ATWYKDGQK-VEE--SELLVVKMD---GRKHRLILPEAKVQDSGEFECRTEG 86 (104)
T ss_dssp EESSSCEECCEECSSTTCC-CEEEETTEE-CCC--BTTBEEEEE---TTEEEEEESSCCTTTCEEEEEECSS
T ss_pred EeCCCcEEEEEEecCCCCc-cEEeeCCEE-CCC--CCCEEEEeC---CCEEEEEECCCChhhCEEEEEEECC
Confidence 3457778888999999988 899998753 221 223333211 2357899999999999999999864
No 289
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.77 E-value=2.3e-08 Score=75.08 Aligned_cols=121 Identities=11% Similarity=0.038 Sum_probs=72.9
Q ss_pred hhhccceeeEEeecCC-Ccc---EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-
Q psy534 8 KSIFQMLSVGDFADDE-DIP---VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR- 82 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~-p~p---~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~- 82 (145)
..++..+.+.|.+.|. |.| .+.||+++.... .....+.....+.......+|.|..++.+|.|.|+|++.+...
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~-~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 258 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVH-TAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 258 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCcccc-CcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCC
Confidence 3456788899999877 333 699999984321 1111111111110111256799999999999999999964310
Q ss_pred ---------------CCC------C--CCCCcEEEEEEeE-----------Eec-----------------CC-----cE
Q psy534 83 ---------------SPN------S--HKNGTWFHLDVHG-----------VFN-----------------DG-----TE 106 (145)
Q Consensus 83 ---------------~~~------~--~~~g~~~~l~c~~-----------~~~-----------------~~-----~~ 106 (145)
+|. . ...|..+.|.|.. +.. ++ ..
T Consensus 259 ~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~ 338 (376)
T 2aty_A 259 APIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSK 338 (376)
T ss_pred CceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEE
Confidence 110 0 1237789999981 001 11 12
Q ss_pred EEEcccCCCCCeeeEEEEecCCC
Q psy534 107 LRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 107 L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
|.|.....+|.|.|+|.|+|..-
T Consensus 339 L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 339 LNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EEEcHHHhCCCCcEEEEEEeCCC
Confidence 55555555678999999999754
No 290
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.77 E-value=2e-08 Score=62.34 Aligned_cols=70 Identities=14% Similarity=0.226 Sum_probs=51.2
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+.++.+-|.+.+.+.+.+.||+... .. + ...+.+|+.+.. ...+.+|.|.+++.+|+|.|+|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~DsG~Y~C 88 (108)
T 1qfw_M 12 SMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSG---SATDFTLTISSVQAEDFADYHC 88 (108)
T ss_dssp ECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCB---CSSEEEEEESSCCTTCCSEEEE
T ss_pred EEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEc---CCCEEEEEECCCChhhCEEEEE
Confidence 45678889999999887777899998642 10 0 112456776531 2346789999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 89 ~~~~ 92 (108)
T 1qfw_M 89 GQTY 92 (108)
T ss_dssp EECS
T ss_pred EEcc
Confidence 9863
No 291
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.76 E-value=1.6e-08 Score=64.45 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=48.1
Q ss_pred hhhccceeeEEeecCCCcc----EEEEecCCC---------------Cccc--ccccceEEEecCCCCC--------Cee
Q psy534 8 KSIFQMLSVGDFADDEDIP----VYIWYDSYP---------------THEA--EEYKGRISRVDKESPF--------GMA 58 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p----~~~w~k~~~---------------~~~~--~~~~~R~~~~~~~~~~--------~~~ 58 (145)
+..+..+.+-|.+.+.+.+ .+.|++... .... ..|++|+.+..+.... .+.
T Consensus 14 ~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~~~~ 93 (128)
T 3r0n_A 14 GQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQDA 93 (128)
T ss_dssp CCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBCSBC
T ss_pred EEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCCCCe
Confidence 3456667777777655433 677887521 1111 2378899886543222 267
Q ss_pred eEEEcccCCCCCEEEEEEEEE
Q psy534 59 SLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 59 sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
+|.|.+++.+|+|.|+|.+..
T Consensus 94 sL~I~~v~~~D~G~Y~C~v~~ 114 (128)
T 3r0n_A 94 TLALHGLTVEDEGNYTCEFAT 114 (128)
T ss_dssp CEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEccCCchhCeEEEEEEEe
Confidence 999999999999999998753
No 292
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.76 E-value=1.8e-08 Score=62.69 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=51.4
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC-C----cc------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP-T----HE------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~----~~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+.++.+-|.+.+.+.+.+.||++.. . .+ ...+.+|+.+.. .....+|.|.+++.+|+|.|+|
T Consensus 14 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~v~~~DsG~Y~C 90 (109)
T 2q20_A 14 SASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSG---SGTDFTFTISSLQPEDIATYYC 90 (109)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEEEEE
T ss_pred EecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec---cCCEEEEEECCCChhhCEEEEE
Confidence 45677889999999988788899998642 1 00 112456776532 2347789999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 91 ~~~~ 94 (109)
T 2q20_A 91 QQYD 94 (109)
T ss_dssp EECS
T ss_pred EEee
Confidence 9964
No 293
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.76 E-value=1.7e-08 Score=62.62 Aligned_cols=70 Identities=14% Similarity=0.151 Sum_probs=51.2
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+.++.+-|.+.+.+.+.+.||+... .. + ...+.+|+.+.. .....+|.|.+++.+|+|.|+|
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~DsG~Y~C 88 (107)
T 1i8k_A 12 SVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSG---TGTDFVFTIENTLSEDVGDYYC 88 (107)
T ss_dssp ECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE---ETTEEEEEESSCCGGGCEEEEE
T ss_pred EecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEc---cCCEEEEEECCCCHHHCEEEEE
Confidence 45678889999999888778899998641 11 0 112456776532 2346789999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 89 ~~~~ 92 (107)
T 1i8k_A 89 LQSF 92 (107)
T ss_dssp EECS
T ss_pred EEee
Confidence 9863
No 294
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.75 E-value=2.7e-08 Score=60.73 Aligned_cols=63 Identities=10% Similarity=-0.070 Sum_probs=46.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
...+.++.+.|-+. .|.|.+.||+++... .. ..|+.+..+ ....+|.|.+++.+|+|.|.|.+
T Consensus 20 v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i-~~--~~~~~~~~~---~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 20 VDKGGRVRFVVELA-DPKLEVKWYKNGQEI-RP--STKYIFEHK---GCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp ECTTEEEEEEEEES-CTTSCEEEEESSCBC-CC--BTTEEEEEE---TTEEEEEEEEECTTTCCEEEEEE
T ss_pred EcCCCcEEEEEEec-CCCceEEEEECCEEC-CC--CCCEEEEec---CCEEEEEEcCCCcCcCEEEEEEE
Confidence 34567788889888 689999999998542 22 234444221 22457999999999999999998
No 295
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.75 E-value=2.4e-08 Score=61.12 Aligned_cols=63 Identities=16% Similarity=0.160 Sum_probs=46.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
...+..+.+.|.+.|.|.| +.|++++... . ...|+.+..+ ....+|.|.+++.+|+|.|.|.+
T Consensus 20 v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l-~--~~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~~ 82 (103)
T 2e7b_A 20 VLEGGAATLRCVLSSVAAP-VKWCYGNNVL-R--PGDKYSLRQE---GAMLELVVRNLRPQDSGRYSCSF 82 (103)
T ss_dssp EESSSCEEEEEECSSCCCS-CEEEESSSBC-C--CSSSEEEEEC---SSEEEEEECSCCTTTCCCEEEEC
T ss_pred EECCCcEEEEEEEeCCCCC-eEEEECCEEC-C--CCCcEEEEEc---CCEEEEEEccCCcccCEEEEEEE
Confidence 3456778889999999988 9999987542 2 2235554322 23567999999999999999984
No 296
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=4.1e-09 Score=63.94 Aligned_cols=57 Identities=18% Similarity=0.143 Sum_probs=46.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|.+.|.|.|.+.|+|++..... ..+.+|.|.+++.+|+|.|.|.+.+
T Consensus 22 v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~---------------~~~~~L~i~~v~~~d~G~Y~C~a~n 78 (96)
T 2ens_A 22 VAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPL---------------PPSPVLILPEIGPQDQGTYSCVATH 78 (96)
T ss_dssp ECTTCEEEEECCCSSCSSCCCCCEESSSBCSS---------------CCCSEEEEESCCTTTCEEEECEECC
T ss_pred EcCCCeEEEEEEEccCCCCEEEEEECCEECcC---------------CCCCEEEECCCCcccCEEEEEEEEe
Confidence 45667888899999999999999998753111 1267899999999999999999975
No 297
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.74 E-value=3.6e-08 Score=59.63 Aligned_cols=63 Identities=10% Similarity=0.030 Sum_probs=45.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
...+.++.+.|-. +.|.+.+.|||++... ... .|+.+..+ ....+|.|.+++.+|+|.|.|.+
T Consensus 20 v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l-~~~--~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 20 VAAGSPAVFEAET-ERAGVKVRWQRGGSDI-SAS--NKYGLATE---GTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp EETTSCEEEEEEC-SSSSCCCEEECSSSEE-CSS--TTCEEEEE---TTEEEEEESSCCTTCCSEEEEEE
T ss_pred EeCCCcEEEEEEe-CCCCCeEEEEECCEEC-CCC--CcEEEEEc---CCEEEEEEcCCCcccCEEEEEEE
Confidence 3456778888988 7888999999998542 211 23333221 22568999999999999999998
No 298
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.74 E-value=1.3e-08 Score=70.33 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=46.0
Q ss_pred ccceeeEEeecCC-CccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 11 FQMLSVGDFADDE-DIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 11 ~~~~~~~~w~~g~-p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
+..+.+.|-+.|. |.|.+.|+|++... .. ..|... ..+..+|.|.+++.+|+|.|+|.|.|.
T Consensus 131 g~~v~l~C~v~g~~P~p~i~W~k~g~~l-~~--~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 193 (207)
T 3rbs_A 131 ECNVLLKCKVANIKKETHIVWYKDEREI-SV--DEKHDF-----KDGICTLLITEFSKKDAGIYEVILKDD 193 (207)
T ss_dssp TTEEEEEEEEESCCTTCEEEEEETTEEE-CC--CCCCCC-----SSEEEEEEETTCCGGGCEEEEEEEEET
T ss_pred CCcEEEEEEEeCCCCCCEEEEEECCEEC-CC--CCceEc-----CCCEEEEEECCCCcccCEEEEEEEEcC
Confidence 4456677888898 99999999998542 21 123221 234668999999999999999999864
No 299
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.74 E-value=1.1e-08 Score=64.71 Aligned_cols=66 Identities=15% Similarity=0.154 Sum_probs=46.9
Q ss_pred hhhccceeeEEeecC--CCccEEEEecCCCC----------cccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 8 KSIFQMLSVGDFADD--EDIPVYIWYDSYPT----------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g--~p~p~~~w~k~~~~----------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
+..+..+.+-|.+.+ .+.+.+.|++++.. .+.+.|++|+.+ ..+.+|.|++++.+|+|.|+|
T Consensus 15 ~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~------~~~~sL~I~~v~~~D~G~Y~C 88 (117)
T 3q0h_A 15 AEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAP------GPGLGLTLQSLTVNDTGEYFC 88 (117)
T ss_dssp EETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEE------CSTTCEEECSCCGGGCEEEEE
T ss_pred EecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEe------CCceEEEEeeCChhhCEEEEE
Confidence 345666777777765 33456788876421 123457888886 237899999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+..
T Consensus 89 ~v~~ 92 (117)
T 3q0h_A 89 IYHT 92 (117)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9853
No 300
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.73 E-value=2e-08 Score=63.74 Aligned_cols=70 Identities=19% Similarity=0.256 Sum_probs=51.6
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
++..+..+.+-|.+.+.+.+.+.||+... .. + ...+.+|+.+.. .....+|.|.+++.+|+|.|+|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~v~~~DsG~Y~C 88 (120)
T 1mqk_L 12 SASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSG---SGTQFSLKINSLLPEDFGSYYC 88 (120)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEEEEE
T ss_pred EEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEec---cCCEEEEEECCCCHHHCEEEEE
Confidence 45678889999999988788899998641 10 0 112456776532 2347889999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 89 ~~~~ 92 (120)
T 1mqk_L 89 QHHY 92 (120)
T ss_dssp EECS
T ss_pred EEEe
Confidence 9974
No 301
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.73 E-value=7.2e-09 Score=79.62 Aligned_cols=67 Identities=16% Similarity=0.218 Sum_probs=48.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|.+.|.|.|.+.|++++.........+|+... .+++|.|.+++.+|+|.|+|.|.+.
T Consensus 397 v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~a~N~ 463 (477)
T 2id5_A 397 VDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVF------PDGTLEVRYAQVQDNGTYLCIAANA 463 (477)
T ss_dssp EETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEEC------TTSCEEESSCCSTTCEEEEEEEEET
T ss_pred EeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeC------CCCEEEEeeCChHHCEEEEEEEEeC
Confidence 345667778888889999999999998654333344566552 3678999999999999999999753
No 302
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.73 E-value=1.8e-08 Score=63.49 Aligned_cols=71 Identities=18% Similarity=0.210 Sum_probs=46.0
Q ss_pred hhccceeeEEeecC--CCccEEEEecCCCCcccc--cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADD--EDIPVYIWYDSYPTHEAE--EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g--~p~p~~~w~k~~~~~~~~--~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+..+.+.|-+.| .|.+.+.|++++...... ....+.............+|.|.+++.+|+|.|.|.+.+
T Consensus 21 ~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 95 (122)
T 3s35_X 21 SVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 95 (122)
T ss_dssp EETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEEC
T ss_pred ecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEcc
Confidence 45678888999988 456789999987532110 011111111100011367899999999999999999975
No 303
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.73 E-value=3.1e-08 Score=61.25 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=46.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
...+.++.+.|.+ +.|.+.+.|+|++... ... ..|+.+..+ ....+|.|.+++.+|+|.|.|.+.
T Consensus 28 v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l-~~~-~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~ 92 (104)
T 1pd6_A 28 VSKGHKIRLTVEL-ADHDAEVKWLKNGQEI-QMS-GSKYIFESI---GAKRTLTISQCSLADDAAYQCVVG 92 (104)
T ss_dssp EETTSCEEEEEEC-SSSSSCCEEEESSSEE-CCC-SSSSEEEEE---TTEEEEEECSCSSSSCEEEEEEET
T ss_pred EecCCCEEEEEEE-cCCCCEEEEEECCEEC-CCC-CCeEEEEec---CCEEEEEECCCCcccCEEEEEEEC
Confidence 4556778888988 7888899999998642 221 134443211 224589999999999999999983
No 304
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.73 E-value=1.3e-08 Score=62.98 Aligned_cols=65 Identities=15% Similarity=-0.010 Sum_probs=46.3
Q ss_pred hhhccceeeEEeecCCCc-cEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDI-PVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~-p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
...+..+.+.|-..+.|. +.+.|||++... .. .+|+.+..+ ....+|.|.+++.+|+|.|+|.+.
T Consensus 20 v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i-~~--~~r~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 20 VLEGESCSFECVLSHESASDPAMWTVGGKTV-GS--SSRFQATRQ---GRKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp EESSCCEEEEEECSSCCCSSCBCCBSSSSBC-SB--CSSCEEEEE---TTEEEEEECSCCTTTCSCEEEEET
T ss_pred EcCCCcEEEEEEEcCCCCCceeEEEECCEEC-CC--CCCEEEEEc---CCEEEEEECCCCHHHCEEEEEEEC
Confidence 345667788898888764 478999998642 21 234444321 235689999999999999999874
No 305
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.73 E-value=1.5e-08 Score=63.65 Aligned_cols=71 Identities=24% Similarity=0.177 Sum_probs=48.1
Q ss_pred hhccceeeEEeecCCCc----cEEEEecCCCC------c------------ccccccceEEEecCCCCCCeeeEEEcccC
Q psy534 9 SIFQMLSVGDFADDEDI----PVYIWYDSYPT------H------------EAEEYKGRISRVDKESPFGMASLNLTKIR 66 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~----p~~~w~k~~~~------~------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~ 66 (145)
..+.++.+-|.+.+.+. +.+.|+++... . ....+.+|+.+..+....++.+|.|.+++
T Consensus 18 ~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~ 97 (126)
T 1eaj_A 18 AKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQ 97 (126)
T ss_dssp ETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEECSCC
T ss_pred EeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEECcCC
Confidence 44566677777664432 45788776421 0 02456788887543233456899999999
Q ss_pred CCCCEEEEEEEEE
Q psy534 67 ESDQGWYECKVVF 79 (145)
Q Consensus 67 ~~D~G~Y~C~~~~ 79 (145)
.+|+|.|.|.+.+
T Consensus 98 ~~D~G~Y~C~v~~ 110 (126)
T 1eaj_A 98 LSDIGTYQCKVKK 110 (126)
T ss_dssp GGGCEEEEEEEEE
T ss_pred hHHCeEEEEEEEc
Confidence 9999999999975
No 306
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.72 E-value=6.5e-08 Score=64.68 Aligned_cols=70 Identities=16% Similarity=0.216 Sum_probs=51.4
Q ss_pred hhhccceeeEEeecCCC-ccEEEEec---CCCCcccccccceEEEecCCCCCCeeeEEEcccC-CCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDED-IPVYIWYD---SYPTHEAEEYKGRISRVDKESPFGMASLNLTKIR-ESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p-~p~~~w~k---~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~-~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|-+.|.| .|.+.|++ ++...+.....+|+.+..+ .....|.|.+++ .+|+|.|.|.+.+.
T Consensus 95 ~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~~d~G~Y~C~a~N~ 169 (184)
T 3b5h_A 95 INEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSS---QGRSELHIENLNMEADPGQYRCNGTSS 169 (184)
T ss_dssp ECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEE---TTEEEEEECSCCTTTSSEEEEEEEEET
T ss_pred EcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEec---CCeeEEEEeeccccccCceEEEEEEeC
Confidence 34567788999999999 89999999 4433332233466665432 235689999999 99999999999753
No 307
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.72 E-value=1.5e-08 Score=64.42 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=30.2
Q ss_pred cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 39 AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 39 ~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
.+.|++|+.+. ..+++|.|.+++.+|+|.|.|++.+
T Consensus 59 ~~~f~~R~~l~-----~~~~sL~I~nv~~~DsG~Y~c~v~~ 94 (121)
T 2edo_A 59 ESKFKGRVRLD-----PQSGALYISKVQKEDNSTYIMRVLK 94 (121)
T ss_dssp SCTTTTTCEEC-----TTTCCEEESSCCGGGCSEEEEEEEE
T ss_pred ChhcCCcEEEe-----CCCceEEEeCCCHHHCeEEEEEEEc
Confidence 35688898873 2478999999999999999999964
No 308
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.72 E-value=8.9e-09 Score=70.76 Aligned_cols=64 Identities=14% Similarity=0.033 Sum_probs=38.1
Q ss_pred hhccceeeEEeecCCC----ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEE------cccCCCCCEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDED----IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNL------TKIRESDQGWYECKVV 78 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p----~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I------~~v~~~D~G~Y~C~~~ 78 (145)
..+..+.+.|.+.|.+ .+.+.|||++..... ....+... ..++.+.| .....+|+|.|+|++.
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~-~~~~~~~~------~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~ 88 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHN-AKTKPREE------QYNSTYRVVSVLTVLHQDWLNGKEYKCKVS 88 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECC-CEECCCEE------CTTSCEEEEEEEECCHHHHHTTCCEEEEEE
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccC-cccCCcee------ccCCcEEEEEEEEEEHHHccCCceEEEEEE
Confidence 5688899999998764 249999999843211 11111111 11233333 3333445999999996
Q ss_pred E
Q psy534 79 F 79 (145)
Q Consensus 79 ~ 79 (145)
+
T Consensus 89 n 89 (207)
T 1l6x_A 89 N 89 (207)
T ss_dssp C
T ss_pred c
Confidence 4
No 309
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.71 E-value=1.6e-07 Score=66.40 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=46.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCC--------------cccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPT--------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~--------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
+..+..+.+-|.+. .+.+.+.||++... .....+.+|+.+..+ ..++.+|.|.+++.+|+|.|
T Consensus 15 v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~--~~~~~~L~I~~v~~~D~G~Y 91 (252)
T 1oga_E 15 RKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSRE--KKESFPLTVTSAQKNPTAFY 91 (252)
T ss_dssp EETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCS--STTBCCEEECSCCSCCCEEE
T ss_pred EcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEec--CCCEEEEEECcCChhhCEEE
Confidence 34566677777764 34677888875310 011235678876432 13478999999999999999
Q ss_pred EEEEEE
Q psy534 74 ECKVVF 79 (145)
Q Consensus 74 ~C~~~~ 79 (145)
+|.+.+
T Consensus 92 ~C~~~~ 97 (252)
T 1oga_E 92 LCASSS 97 (252)
T ss_dssp EEEEES
T ss_pred EEEEec
Confidence 999865
No 310
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.71 E-value=2e-08 Score=67.45 Aligned_cols=65 Identities=17% Similarity=0.195 Sum_probs=48.9
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|.+.|.|.|.+.|++++... ......|.... .+++|.|.+++.+|+|.|+|.+.+.
T Consensus 109 ~~g~~~~l~C~~~g~p~p~v~W~~~~~~~-~~~~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~a~n~ 173 (189)
T 2v44_A 109 KQGEDAEVVCRVSSSPAPAVSWLYHNEEV-TTISDNRFAML------ANNNLQILNINKSDEGIYRCEGRVE 173 (189)
T ss_dssp ETTSCEEECCEEECSSCCEEEEEEEC--C-EECCCTTEEEC------TTSCEEETTCCGGGCEEEEEEEEET
T ss_pred eCCCCEEEEEEECcCCCCcEEEEECCcEE-eccCCCCEEEe------cCCcEEEEEcCcccCeEEEEEEEcc
Confidence 35667788899999999999999987542 22223455552 3569999999999999999999763
No 311
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=9.7e-09 Score=62.85 Aligned_cols=68 Identities=13% Similarity=0.126 Sum_probs=47.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccc-cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAE-EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~-~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|-..|.| +.+.|||++...... ....|+.+..+ ....+|.|.+++.+|+|.|.|.+.+
T Consensus 20 v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~---~~~~~L~I~~~~~~D~G~Y~C~a~n 88 (101)
T 2edk_A 20 VFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKD---GKRHILIFSDVVQEDRGRYQVITNG 88 (101)
T ss_dssp EESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEEC---SSEEEEECSSCCGGGCSBEEEECSS
T ss_pred EcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEEC---CCEEEEEECCCChhhCEEEEEEEcC
Confidence 34566778889888888 899999998643211 11113344321 2356899999999999999998853
No 312
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.70 E-value=2.9e-08 Score=60.91 Aligned_cols=66 Identities=11% Similarity=-0.013 Sum_probs=46.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
...+.++.+.|-+.| |.+.+.|||++.. +...-..|..+..+ ....+|.|.+++.+|+|.|.|.+.
T Consensus 19 v~~G~~v~l~C~~~~-~~~~v~W~k~g~~-l~~~~~~~~~~~~~---~~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 19 AYCGERVELECEVSE-DDANVKWFKNGEE-IIPGPKSRYRIRVE---GKKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp EETTEEEEEEEECSS-SSCCCEEEETTEE-CCCSTTCSEEEEEE---TTEEEEEEEEECTTTCSEEEEEET
T ss_pred EECCCCEEEEEEecC-CCCeEEEEECCEE-CCCCCceEEEEEEc---CCEEEEEECCCCcccCEEEEEEEC
Confidence 345677788898877 6689999999854 22221113343221 235789999999999999999985
No 313
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.70 E-value=2.9e-08 Score=62.92 Aligned_cols=70 Identities=16% Similarity=0.170 Sum_probs=50.9
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+.++.+-|.+.+.+.+.+.||+... .. + ...+.+|+.+.. .....+|.|.+++.+|+|.|+|
T Consensus 14 ~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~v~~~DsG~Y~C 90 (119)
T 2e27_L 14 SASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSG---SGRDYSFSISNLEPEDAATYYC 90 (119)
T ss_dssp EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE---ETTEEEEEECSCCGGGCEEEEE
T ss_pred EEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc---cCCEEEEEECCCChHHCEEEEE
Confidence 45677888999999888788899998641 11 0 112356776532 2347789999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 91 ~~~~ 94 (119)
T 2e27_L 91 LQYD 94 (119)
T ss_dssp EECG
T ss_pred EEcc
Confidence 9863
No 314
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.69 E-value=4.6e-08 Score=60.03 Aligned_cols=73 Identities=14% Similarity=0.108 Sum_probs=46.6
Q ss_pred hhhccceeeEEeecC--CCccEEEEecCCCCcccccccceEEEec--CCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADD--EDIPVYIWYDSYPTHEAEEYKGRISRVD--KESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g--~p~p~~~w~k~~~~~~~~~~~~R~~~~~--~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.| .+.+.+.|+|++............++.. ........+|.|.+++.+|+|.|.|.+.+.
T Consensus 22 v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 98 (112)
T 3so5_A 22 AIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNH 98 (112)
T ss_dssp ECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeC
Confidence 345677888899884 4568999999975422111111111100 000112578999999999999999999763
No 315
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.68 E-value=2.2e-08 Score=73.83 Aligned_cols=62 Identities=15% Similarity=0.148 Sum_probs=42.7
Q ss_pred hhccceeeEEeecCC-Cc-cEEEEecCCCCcccccc------cceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDE-DI-PVYIWYDSYPTHEAEEY------KGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~-p~-p~~~w~k~~~~~~~~~~------~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+..+.+.|.+.|. |. +.+.|++++.......+ .++... ...|.|.+++.+| |.|+|.+.+
T Consensus 133 ~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~--------~s~L~i~~~~~~d-G~Y~C~a~n 202 (344)
T 1za6_B 133 TSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--------SSVVTVPSSSLGT-QTYICNVNH 202 (344)
T ss_dssp TSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEE--------EEEEEEETTHHHH-BCEEEEEEE
T ss_pred cCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEE--------EEEEEEcHHHcCC-CcEEEEEEe
Confidence 356678889999876 65 78999998743110001 112111 4579999999888 999999965
No 316
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.67 E-value=3.8e-08 Score=66.08 Aligned_cols=65 Identities=17% Similarity=0.140 Sum_probs=50.1
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|-+.|.|.|.+.|++++.. +......|.... .+++|.|.+++.+|+|.|.|.+.+.
T Consensus 113 ~~g~~~~l~C~~~g~p~~~v~W~~~~~~-~~~~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~a~n~ 177 (191)
T 1epf_A 113 KEGEDAVIVCDVVSSLPPTIIWKHKGRD-VILKKDVRFIVL------SNNYLQIRGIKKTDEGTYRCEGRIL 177 (191)
T ss_dssp CTTSCEEECCEEECSSCCEEEEEETTEE-GGGGCCTTEEEC------TTSCEEETTCCGGGCEEEEEEEEEG
T ss_pred cCCCeEEEEEEECCCCCCEEEEEECCEE-eeccCCceEEEe------cCCeEEECCCChhhCEEEEEEEEEe
Confidence 4566778889999999999999998754 222233455542 3568999999999999999999864
No 317
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.67 E-value=2.6e-08 Score=63.78 Aligned_cols=69 Identities=22% Similarity=0.330 Sum_probs=48.8
Q ss_pred hhhccceeeEEeec---CCCccEEEEecCCCCc----c-----------------------cccccceEEEecCCCCCCe
Q psy534 8 KSIFQMLSVGDFAD---DEDIPVYIWYDSYPTH----E-----------------------AEEYKGRISRVDKESPFGM 57 (145)
Q Consensus 8 ~~~~~~~~~~~w~~---g~p~p~~~w~k~~~~~----~-----------------------~~~~~~R~~~~~~~~~~~~ 57 (145)
+..+..+.+-|.+. +.+.+.+.||++.... + .+.+++|+.+.. .++
T Consensus 16 v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~----~~~ 91 (135)
T 1xt5_A 16 VHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN----LAA 91 (135)
T ss_dssp EETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC----TTS
T ss_pred EeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec----CCC
Confidence 34566777778764 3567788888765321 0 134557887632 346
Q ss_pred eeEEEcccCCCCCEEEEEEEEEe
Q psy534 58 ASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 58 ~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+|.|.+++.+|+|.|+|.+.+.
T Consensus 92 ~sL~I~~v~~~D~G~Y~C~v~~~ 114 (135)
T 1xt5_A 92 PTLRLTHVHPQDGGRYWCQVAQW 114 (135)
T ss_dssp CCEEECSCCGGGCEEEEEEEECS
T ss_pred CeEEECCCChhhCcEEEEEEEcC
Confidence 89999999999999999999753
No 318
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=2.1e-08 Score=61.41 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=46.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|.+.+ |.+.+.|+|++.... . ..|+.+..+ .....|.|.+++.+|+|.|.|.+.+
T Consensus 20 v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~-~--~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 20 VAPGEDVELRCELSR-AGTPVHWLKDRKAIR-K--SQKYDVVCE---GTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp ECTTSCEEECCEESS-SSCCCCEEESSCBCC-C--SSSEEEEEE---TTEEEEEESSCCTTTCSEEEEECSS
T ss_pred EcCCCCEEEEEEEeC-CCCcEEEEECCEEcc-C--CCCEEEEEC---CCEEEEEECCCCcccCEEEEEEEcc
Confidence 345677788898887 778899999985422 1 224444321 2256799999999999999999864
No 319
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.66 E-value=9.6e-08 Score=64.25 Aligned_cols=69 Identities=22% Similarity=0.257 Sum_probs=49.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecC--CCCcccccccceEEEecCCCCCCeeeEEEcccC-CCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDS--YPTHEAEEYKGRISRVDKESPFGMASLNLTKIR-ESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~--~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~-~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|-+.|.|.|.+.|+++ +.........+|+.+..+ ....+|.|.+++ .+|+|.|.|.+.+
T Consensus 104 ~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~~d~G~Y~C~a~N 175 (190)
T 2wv3_A 104 KNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINK---ENYTELNIVNLQITEDPGEYECNATN 175 (190)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEEC---SSEEEEEECSCCTTTSCEEEEEEEEC
T ss_pred eeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecC---CCeeEEEEEeccccCCCEEEEEEEEe
Confidence 34567788899999999999999994 322111123455555332 235689999999 7999999999975
No 320
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.66 E-value=7.9e-08 Score=59.82 Aligned_cols=61 Identities=15% Similarity=0.083 Sum_probs=44.3
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
..+..+.+.|.+.+. |.+.|||++... . ...|+.+..+ ....+|.|.+++.+|+|.|.|.+
T Consensus 32 ~~G~~v~l~C~~~~~--p~v~W~k~~~~l-~--~~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a 92 (113)
T 2edh_A 32 TEGATAVLRCELSKM--APVEWWKGHETL-R--DGDRHSLRQD---GARCELQIRGLVAEDAGEYLCMC 92 (113)
T ss_dssp CTTSCEEEEEEESSC--CCCEEEESSSBC-C--CSSSEEEEEE---TTEEEEEECSCCSTTCEEEEEEE
T ss_pred eCCCeEEEEEEECCC--CcEEEEECCEEC-C--CCCcEEEEEC---CCEEEEEECCCChhhCEEEEEEe
Confidence 456677888988775 678999988542 2 1245555321 22458999999999999999998
No 321
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.65 E-value=4.3e-08 Score=61.15 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=50.9
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCCC-----cc------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYPT-----HE------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~~-----~~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+..+.+-|.+.+.+.+.+.||+...- .+ ...+.+|+.+.. .....+|.|.+++.+|+|.|.|
T Consensus 15 ~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~v~~~DsG~Y~C 91 (111)
T 1i3g_L 15 STSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSG---SGTDFTLTISNVQSEDLADYFC 91 (111)
T ss_dssp ECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCSEEEE
T ss_pred EEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc---CCCEEEEEECCCCHHHCEEEEE
Confidence 456788889999998777778999986521 00 112456776532 2346789999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 92 ~~~~ 95 (111)
T 1i3g_L 92 QQYS 95 (111)
T ss_dssp EECS
T ss_pred EEec
Confidence 9863
No 322
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.65 E-value=6.4e-08 Score=59.70 Aligned_cols=63 Identities=17% Similarity=0.104 Sum_probs=45.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
...+..+.+.|.+.+. |.+.|++++... . ...|+.+..+ ....+|.|.+++.+|+|.|+|.+.
T Consensus 20 v~~G~~v~l~C~~~~~--p~v~W~k~~~~~-~--~~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~ 82 (108)
T 2dm7_A 20 ASEGATATLQCELSKV--APVEWKKGPETL-R--DGGRYSLKQD---GTRCELQIHDLSVADAGEYSCMCG 82 (108)
T ss_dssp EETTSCEEEEEEBSSS--CCCEEESSSSBC-C--SSSSCEEEEE---TTEEEEEESSCCTTTCSEEEEEET
T ss_pred EeCCCcEEEEEEeCCC--CeeEEEECCEEC-C--CCCCEEEEec---CCEEEEEECCCCcccCEEEEEEEc
Confidence 3456778888988776 678999998542 2 1234444321 235569999999999999999983
No 323
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.65 E-value=6.1e-08 Score=60.35 Aligned_cols=70 Identities=17% Similarity=0.187 Sum_probs=50.0
Q ss_pred HhhhccceeeEEeecCCC----ccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 7 VKSIFQMLSVGDFADDED----IPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p----~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
.+..+..+.+-|.+.+.+ .+.+.||+... .. + ...+.+|+.+.. .....+|.|.+++.+|+|
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~v~~~DsG 88 (111)
T 1j05_L 12 AVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG---SRTDFTLIIDPVEADDVA 88 (111)
T ss_dssp ECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEE---ETTEEEEEESSCCGGGCE
T ss_pred EEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEc---cCCEEEEEECCCCcccCE
Confidence 456778889999988776 57789998641 10 0 123456776532 234678999999999999
Q ss_pred EEEEEEEE
Q psy534 72 WYECKVVF 79 (145)
Q Consensus 72 ~Y~C~~~~ 79 (145)
.|+|.+.+
T Consensus 89 ~Y~C~~~~ 96 (111)
T 1j05_L 89 TYYCQQTN 96 (111)
T ss_dssp EEEEEECS
T ss_pred EEEEEEec
Confidence 99999863
No 324
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.64 E-value=6.5e-08 Score=60.13 Aligned_cols=71 Identities=18% Similarity=0.167 Sum_probs=47.5
Q ss_pred hhhccceeeEEeec-CCCcc----EEEEecCCCCc-c----------cccccceEEEecCCCCCC--eeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFAD-DEDIP----VYIWYDSYPTH-E----------AEEYKGRISRVDKESPFG--MASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~-g~p~p----~~~w~k~~~~~-~----------~~~~~~R~~~~~~~~~~~--~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+. +.+.+ .+.|++++... + ... .+|+.+..+....+ +.+|.|.+++.+|
T Consensus 12 ~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~sL~I~~v~~~D 90 (118)
T 3udw_C 12 GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSE-SKRLEFVAARLGAELRNASLRMFGLRVED 90 (118)
T ss_dssp EETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETT-CSSEEETTCCTTSCCCBCCEEECSCCGGG
T ss_pred EeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCC-cCcEEEecccccCCCCCcEEEEeecChHH
Confidence 44567777888884 44322 48898874221 0 011 56777754433232 7899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 91 ~G~Y~C~v~~ 100 (118)
T 3udw_C 91 EGNYTCLFVT 100 (118)
T ss_dssp CEEEEEEEEE
T ss_pred CeEEEEEEEE
Confidence 9999999975
No 325
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.64 E-value=2e-08 Score=70.10 Aligned_cols=64 Identities=20% Similarity=0.212 Sum_probs=46.6
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCccc---------------------ccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEA---------------------EEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~---------------------~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+.++.+.|-+.|.|.|.+.|++++..... ..+..+... ....+|.|.+++.+
T Consensus 150 ~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~L~i~~v~~~ 223 (250)
T 2fbo_J 150 EGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASF------SGARNLVIRAAKIT 223 (250)
T ss_dssp TTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEE------ETTTEEEECSCCGG
T ss_pred CCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEeccccc------CCccEEEEecCCcc
Confidence 467788889999999999999998643211 111122211 12478999999999
Q ss_pred CCEEEEEEEEE
Q psy534 69 DQGWYECKVVF 79 (145)
Q Consensus 69 D~G~Y~C~~~~ 79 (145)
|+|.|+|.|.+
T Consensus 224 D~G~Y~C~a~N 234 (250)
T 2fbo_J 224 DAGRVWCELAT 234 (250)
T ss_dssp GCEEEEEEEES
T ss_pred cCEEEEEEecC
Confidence 99999999986
No 326
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.63 E-value=5.4e-08 Score=58.72 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=43.7
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+..+.+.|-+.| .|.+.|+|++.. +. ...|..+. +.+|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~~G~~~~l~C~~~~--~p~v~W~k~g~~-~~--~~~~~~~~-------~~~L~i~~~~~~D~G~Y~C~a~n 72 (95)
T 4hwu_A 14 APGESLELQCMLKD--AAVISWTKDGVH-LG--PNNRTVLI-------GEYLQIKGATPRDSGLYACTAAR 72 (95)
T ss_dssp CTTSCEEEECCCCT--TCEEEEEETTEE-EC--CCSSEEEE-------TTEEEECSCCGGGCEEEEEEEEC
T ss_pred CCCCEEEEEEEeCC--CCEEEEEECCEE-CC--CCceEEEe-------CCEEEECcCCcccCEEEEEEEcc
Confidence 35667777887776 478999998743 22 22344432 56899999999999999999975
No 327
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.63 E-value=3.8e-08 Score=61.62 Aligned_cols=67 Identities=18% Similarity=0.208 Sum_probs=44.2
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCccccc--ccceEEEecCCCCCCeeeEEE-----cccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEE--YKGRISRVDKESPFGMASLNL-----TKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~--~~~R~~~~~~~~~~~~~sL~I-----~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|-+.|.|.|.+.|++++....... ...+.... .++.+.+ .+++.+|+|.|.|.+.+.
T Consensus 21 v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~ 94 (117)
T 2v9t_A 21 VSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLL------PSGSLFFLRIVHGRKSRPDEGVYVCVARNY 94 (117)
T ss_dssp ECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEEC------TTSCEEESSCCCBTTBCSSCEEEEEEEEET
T ss_pred EcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEe------cCCcEEEEEEEeCCCCcCcCEEEEEEEEeC
Confidence 3456778888999999999999999875322111 11122221 1333333 366899999999999864
No 328
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.63 E-value=8.8e-08 Score=59.49 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=50.5
Q ss_pred HhhhccceeeEEe-ecCCC-ccEEEEecCCCCc---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDF-ADDED-IPVYIWYDSYPTH---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w-~~g~p-~p~~~w~k~~~~~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+.++.+-|. +.+.+ .+.+.||+..... ....+.+|+.+..+ ......+|.|.+++.+|+|.|+|
T Consensus 11 ~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~DsG~Y~C 89 (109)
T 1pew_A 11 SESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSID-RSSNSASLTISGLKTEDEADYYC 89 (109)
T ss_dssp EECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEE-TTTTEEEEEECSCCGGGCEEEEE
T ss_pred EEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEec-cCCCEEEEEECCCChhhCEEEEE
Confidence 3556788888998 77664 4678898876211 01224577776422 23457899999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 90 ~~~~ 93 (109)
T 1pew_A 90 QSYD 93 (109)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9974
No 329
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.63 E-value=1.9e-07 Score=58.18 Aligned_cols=72 Identities=19% Similarity=0.342 Sum_probs=50.7
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCCC---CcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSYP---THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
.+..+.++.+-|.+.+. +.+.+.||++.. ...-....+|+.+..+ ......+|.|.+++.+|+|.|+|.+.+
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 11 TKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVD-KGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp EECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEE-TTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEe-CCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 45678889999999865 578899998631 1111123456654221 223578999999999999999999986
No 330
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.62 E-value=2.1e-07 Score=66.41 Aligned_cols=72 Identities=10% Similarity=0.040 Sum_probs=48.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+.|.|.|.+.|++++... ....................+|.|.+++.+|+|.|.|.|.+.
T Consensus 193 v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 264 (289)
T 3mjg_X 193 VRQGENITLMCIVIGNEVVNFEWTYPRKES-GRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTES 264 (289)
T ss_dssp EETTSCEEEEEEEESCSSBEEEEECTTSSS-SCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEET
T ss_pred eEcCCCEEEEEEECCCCCcceEEEcCCccC-CCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecC
Confidence 345678889999999999999999776421 111111111111101223688999999999999999999864
No 331
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.62 E-value=4e-08 Score=67.88 Aligned_cols=66 Identities=15% Similarity=0.029 Sum_probs=43.7
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCccc-ccccceEEEecCCCCCCeeeE---EEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEA-EEYKGRISRVDKESPFGMASL---NLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~-~~~~~R~~~~~~~~~~~~~sL---~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|-+.|.|.|.+.|+++++.... .....|+.... +++| .|.+++.+|+|.|+|.|.|.
T Consensus 119 ~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~------~g~l~il~i~~v~~~D~G~YtC~A~N~ 188 (203)
T 4fa8_A 119 PDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEK------DGSLSVAVDLSLPKPWHLPVTCVGKND 188 (203)
T ss_dssp SCSCCEEEEEEEEEESCCEEEECCC------------CCEECT------TSCEEEEEEEEECSSCCCCEEEEEESS
T ss_pred cCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeC------CCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 4567788899999999999999887654322 22345665532 4444 45699999999999999853
No 332
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.62 E-value=8.1e-08 Score=61.59 Aligned_cols=71 Identities=18% Similarity=0.141 Sum_probs=48.3
Q ss_pred hhhccceeeEEeec-------CCCccEEEEecCCCC-----cc---------cccccceEEEecCCCCCCeeeEEEcccC
Q psy534 8 KSIFQMLSVGDFAD-------DEDIPVYIWYDSYPT-----HE---------AEEYKGRISRVDKESPFGMASLNLTKIR 66 (145)
Q Consensus 8 ~~~~~~~~~~~w~~-------g~p~p~~~w~k~~~~-----~~---------~~~~~~R~~~~~~~~~~~~~sL~I~~v~ 66 (145)
+..+..+.+-|.+. +.+.+.+.||+.... .+ ...+.+|+.+..+ ...++.+|.|.+++
T Consensus 18 ~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~ 96 (132)
T 1nko_A 18 VQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGD-PQTKNCTLSIRDAR 96 (132)
T ss_dssp EETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSC-GGGTBCCEEECSCC
T ss_pred EcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCC-CCCCceEEEEcccC
Confidence 44566777778775 234567888876421 11 1346789887543 23457899999999
Q ss_pred CCCCEEEEEEEEE
Q psy534 67 ESDQGWYECKVVF 79 (145)
Q Consensus 67 ~~D~G~Y~C~~~~ 79 (145)
.+|+|.|+|.+..
T Consensus 97 ~~DsG~Y~C~v~~ 109 (132)
T 1nko_A 97 MSDAGRYFFRMEK 109 (132)
T ss_dssp GGGCEEEEEEEEE
T ss_pred cccCeeEEEEEEc
Confidence 9999999999874
No 333
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.61 E-value=3.1e-08 Score=62.08 Aligned_cols=64 Identities=11% Similarity=0.017 Sum_probs=45.9
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
..+..+.+.|-+.|.|.|.+.|||++... .. ..|..+... .....+|.|.+++.+|+|.|.|.+
T Consensus 26 ~~G~~v~l~C~~~g~p~p~v~W~k~g~~l-~~--~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (115)
T 2cr6_A 26 QEGSSATFRCRISPANYEPVHWFLDKTPL-HA--NELNEIDAQ--PGGYHVLTLRQLALKDSGTIYFEA 89 (115)
T ss_dssp ETTSCEECCCEEESTTCCSCEEEESSCEE-CC--SSSCCBCCB--TTTBCCBEECSCCTTTCEEEEEEE
T ss_pred eCCCcEEEEEEEcCCCCCccEEEECCEEC-CC--CCcEEEEEc--CCCEEEEEEcCCChhhCEEEEEEE
Confidence 45667778898889999999999998542 21 123322100 123568999999999999999985
No 334
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=98.61 E-value=2.3e-07 Score=65.77 Aligned_cols=61 Identities=18% Similarity=0.284 Sum_probs=40.1
Q ss_pred eEEeecCCCccEEEEe---c--CCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 16 VGDFADDEDIPVYIWY---D--SYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 16 ~~~w~~g~p~p~~~w~---k--~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
-+.|+|..|-..+.|. . ++.....+.+++|+.+..+ .......|++.+++.+|++.|+|..
T Consensus 33 ~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD-~s~nt~yLqm~sL~~eDTAvYYCAr 98 (254)
T 4f9p_D 33 LIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTAD-QSSSTAYMQLSSLTSDDSAVYFCAR 98 (254)
T ss_dssp CEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEE-TTTTEEEEEECSCCGGGCEEEECEE
T ss_pred cEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeec-cCCCcCeeEEccCCCCCCEEEEEEe
Confidence 3557774443344442 1 1222345678999987543 3344677999999999999999964
No 335
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.61 E-value=3.3e-08 Score=60.39 Aligned_cols=64 Identities=9% Similarity=0.113 Sum_probs=45.9
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
...+.++.+.|-+. .|.+.+.|||++... .. ..|+.+..+ ....+|.|.+++.+|+|.|.|.+.
T Consensus 23 v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~-~~--~~~~~~~~~---~~~~~L~I~~~~~~D~G~Y~C~a~ 86 (102)
T 2eo1_A 23 AEAGASATLSCEVA-QAQTEVTWYKDGKKL-SS--SSKVRVEAV---GCTRRLVVQQAGQAEAGEYSCEAG 86 (102)
T ss_dssp EETTCCEEECCBCS-CSSSCCEEEETTEEC-CC--CSSEEEEEE---TTEEEEEETTCCTTTCSCEEEEET
T ss_pred EeCCCcEEEEEEec-CCCCceEEEECCEEC-CC--CCCEEEEEc---CCEEEEEECCCCcccCEEEEEEcC
Confidence 34566777888887 788999999998542 21 224444321 224689999999999999999884
No 336
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.61 E-value=9.2e-09 Score=65.08 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=50.1
Q ss_pred hhhccceeeEEeecCCCccE-EEEecCCCCcccccccceEEEecCCCC-CCeeeEEEcccCCCCC-EEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPV-YIWYDSYPTHEAEEYKGRISRVDKESP-FGMASLNLTKIRESDQ-GWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~-~~w~k~~~~~~~~~~~~R~~~~~~~~~-~~~~sL~I~~v~~~D~-G~Y~C~~~~~ 80 (145)
...+..+.+.|-+.|.|.|. +.|++++.. +......|+.+...... ....+|.|.+++.+|+ |.|.|.|.|.
T Consensus 25 ~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~ 99 (122)
T 2cry_A 25 ALHGEKGQIKCFIRSTPPPDRIAWSWKENV-LESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNS 99 (122)
T ss_dssp CCTTSCCCCCEEECCSSCCSEEEEESSSCE-ECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECS
T ss_pred EecCCCEEEEEEEeecCCCcEeEEEECCEE-ccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECC
Confidence 34567788889999999986 999999854 22222344443211000 1155899999999999 9999999764
No 337
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.02 E-value=5.1e-09 Score=65.35 Aligned_cols=73 Identities=14% Similarity=0.188 Sum_probs=52.5
Q ss_pred HHhhhccceeeEEeecCCCccEEEEecCCC---Cc-c-------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 6 AVKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH-E-------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 6 ~~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~-~-------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
..+..+..+.+-|.+.+.+.+.+.||+... .. + .....+|+.+..+ ....+.+|.|.+++.+|+|.|+
T Consensus 9 v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~DsG~Y~ 87 (110)
T 1u3h_A 9 LTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFN-KREKKLSLHIADSQPGDSATYF 87 (110)
Confidence 456778888999998877778899998642 10 0 0224567765322 2344679999999999999999
Q ss_pred EEEEE
Q psy534 75 CKVVF 79 (145)
Q Consensus 75 C~~~~ 79 (145)
|.+.+
T Consensus 88 C~~~~ 92 (110)
T 1u3h_A 88 CAASA 92 (110)
Confidence 99874
No 338
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.59 E-value=8.6e-08 Score=60.02 Aligned_cols=70 Identities=14% Similarity=0.222 Sum_probs=49.7
Q ss_pred HhhhccceeeEEeecCCC------ccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFADDED------IPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p------~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
.+..+..+.+-|.+.+.+ .+.+.||+... .. + ...+.+|+.+.. .....+|.|.+++.+|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D 88 (114)
T 1eeq_A 12 AVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSG---SGTDFTLTISSLQAED 88 (114)
T ss_dssp EECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGG
T ss_pred EEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEee---cCCEEEEEECCCCccc
Confidence 456778888899988766 36789988641 10 0 123456776532 2346789999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 89 sG~Y~C~~~~ 98 (114)
T 1eeq_A 89 VAVYYCQQYY 98 (114)
T ss_dssp CEEEEEEECS
T ss_pred CEEEEEEEee
Confidence 9999999863
No 339
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.59 E-value=9.1e-08 Score=71.34 Aligned_cols=65 Identities=15% Similarity=0.191 Sum_probs=48.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccc-cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAE-EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~-~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|-+.| |.|.+.|++++...... ...+|+.+ .+++|.|.+++.+|+|.|+|.|.+.
T Consensus 258 v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-------~~~~L~I~~v~~~D~G~Y~C~a~N~ 323 (361)
T 2xot_A 258 AHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-------RNGDLFFKKVQVEDGGVYTCYAMGE 323 (361)
T ss_dssp EETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-------ETTEEEESSCCTTSCEEEEEEEECS
T ss_pred ecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-------ecCeEEEeecCcccCEEEEEEEecC
Confidence 345667788898889 99999999976543222 22335554 2678999999999999999999754
No 340
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.59 E-value=1.2e-07 Score=57.95 Aligned_cols=63 Identities=10% Similarity=0.134 Sum_probs=45.3
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
...+..+.+.|. .+.|.+.+.|+|++.... . ..|+.+..+ ....+|.|.+++.+|+|.|+|.+
T Consensus 20 v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~-~--~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~~ 82 (103)
T 2dku_A 20 VEEKGTAVFTCK-TEHPAATVTWRKGLLELR-A--SGKHQPSQE---GLTLRLTISALEKADSDTYTCDI 82 (103)
T ss_dssp EETTSEEEEEEE-CSSCCSCCEEEESSCBCC-S--SSSEEEEEE---TTEEEEEEESCCTTTCSEEEEEC
T ss_pred EeCCCcEEEEEE-eCCCCCeEEEEeCCEECC-C--CCeEEEEeC---CCEEEEEECCCCcccCEEEEEEe
Confidence 345677888888 488889999999986422 1 234444221 23458999999999999999983
No 341
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.59 E-value=5.9e-08 Score=59.72 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=45.0
Q ss_pred hhhccceeeEEeecCCCc---cEEEEecCCCC--------------cccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDEDI---PVYIWYDSYPT--------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~---p~~~w~k~~~~--------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+-|.+.+.+. ..+.|++.... .....+.+|+.+..+ ...++.+|.|.+++.+|+
T Consensus 6 ~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~-~~~~~~sL~I~~v~~~D~ 84 (109)
T 2oyp_A 6 VEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGD-LNKGDVSLIIKNVTLDDH 84 (109)
T ss_dssp ECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSC-GGGTBCCEEECSCCGGGC
T ss_pred EEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccC-ccCCcEeEEEccCCChhC
Confidence 345566677777664432 23677775421 111234567665322 234578999999999999
Q ss_pred EEEEEEEEE
Q psy534 71 GWYECKVVF 79 (145)
Q Consensus 71 G~Y~C~~~~ 79 (145)
|.|+|.+.+
T Consensus 85 G~Y~C~v~~ 93 (109)
T 2oyp_A 85 GTYCCRIQF 93 (109)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEEc
Confidence 999999964
No 342
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.59 E-value=2.1e-07 Score=57.66 Aligned_cols=72 Identities=24% Similarity=0.332 Sum_probs=50.5
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCCC---CcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSYP---THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
.+..+.++.+-|.+.+. +.+.+.||++.. ...-....+|+.+..+ ......+|.|.+++.+|+|.|+|.+.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 11 TKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVD-EGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp EECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEE-TTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEc-CCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 35677889999999875 367899998742 1111123456654321 224578999999999999999999975
No 343
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.59 E-value=7.1e-08 Score=60.99 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=50.9
Q ss_pred hhhccceeeEEeecCCC----ccEEEEecCC---CCc---ccccccceEEEecCC--CCCCeeeEEEcccCCCCCEEEEE
Q psy534 8 KSIFQMLSVGDFADDED----IPVYIWYDSY---PTH---EAEEYKGRISRVDKE--SPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p----~p~~~w~k~~---~~~---~~~~~~~R~~~~~~~--~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
+..+..+.+-|.+.+.+ .+.+.||+.. ... ....+++|+.+..+. ....+.+|.|.+++.+|+|.|+|
T Consensus 19 v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C 98 (120)
T 3noi_A 19 TLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDASIYVC 98 (120)
T ss_dssp EETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGGCEEEEE
T ss_pred EEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhhCEEEEE
Confidence 45677888889887554 5679999875 111 123466788763220 03457899999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+..
T Consensus 99 ~v~~ 102 (120)
T 3noi_A 99 RVEV 102 (120)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
No 344
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.59 E-value=2e-07 Score=58.99 Aligned_cols=73 Identities=18% Similarity=0.247 Sum_probs=49.3
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---C------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---T------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
.+..+..+.+-|.+.+.+ ...+.||+... . ...+.+++|+.+..+ ...++.+|.|.+++.+|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~D 89 (121)
T 1kxv_C 11 TVPAGGSLRLSCAASGNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQG-NAKNTAYLQMDSLKPDD 89 (121)
T ss_dssp EECTTCCEEEEEEEESCTTCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEEC-SSTTEEEEEECSCCGGG
T ss_pred EEcCCCcEEEEEEecCCCcCceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEE-CCCCEEEEEECCCCHHH
Confidence 345667777777776432 45677776531 1 012335678887543 33457899999999999
Q ss_pred CEEEEEEEEEe
Q psy534 70 QGWYECKVVFL 80 (145)
Q Consensus 70 ~G~Y~C~~~~~ 80 (145)
+|.|+|.+...
T Consensus 90 sg~Y~C~~~~~ 100 (121)
T 1kxv_C 90 TAMYYCKPSLR 100 (121)
T ss_dssp CEEEEEEEEES
T ss_pred CEEEEEEEEec
Confidence 99999999753
No 345
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.58 E-value=1e-07 Score=64.76 Aligned_cols=69 Identities=7% Similarity=-0.136 Sum_probs=42.2
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
....+..+.+.|.+.+.| +.+.|+|++.......... ..... .....+|.|.+++.+|+|.|.|.+.+.
T Consensus 110 ~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~--~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 178 (196)
T 2d3v_A 110 VVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDS--QLTPS--GQFQALFPVGPVTPSHRWMLRCYGSRR 178 (196)
T ss_dssp -------CEEEEEESSCC-SEEEEEEC---CCEEEEEC--EECTT--SCEEEEEECCCCBTTBCEEEEEEEEET
T ss_pred cccCCCcEEEEEEcCCCC-CEEEEEccCCccccccccc--ccccC--CCceeEEEeeecCcccCeeEEEEEEcc
Confidence 345677888999999998 8999999985421111111 11110 122588999999999999999999864
No 346
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.57 E-value=1.1e-07 Score=59.28 Aligned_cols=69 Identities=23% Similarity=0.186 Sum_probs=45.8
Q ss_pred hhhccceeeEEeec-CCCccEEEEecCCC---C--c-----------ccccc-cceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFAD-DEDIPVYIWYDSYP---T--H-----------EAEEY-KGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~-g~p~p~~~w~k~~~---~--~-----------~~~~~-~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+. +.+.+.+.||+... . . ...++ .+|+.+.. ..+..+|.|.+++.+|
T Consensus 11 ~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~~~~~D 87 (111)
T 2qhl_A 11 VKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTV---NDQKFDLNIIGTREDD 87 (111)
T ss_dssp CCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEE---SSSBEEEEESSCCGGG
T ss_pred EeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEE---cCCeEEEEECCCChhH
Confidence 45566666777666 55556677766431 0 0 01234 67777643 2457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|.|.+.+
T Consensus 88 sG~Y~C~~~~ 97 (111)
T 2qhl_A 88 GGEYFCGEVE 97 (111)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEcc
Confidence 9999999864
No 347
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.57 E-value=1.1e-07 Score=58.97 Aligned_cols=64 Identities=13% Similarity=0.064 Sum_probs=45.9
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+..+.+.|.+. .|.+.+.|||++.. +.. ..|..+..+ ....+|.|.+++.+|+|.|.|.+.+
T Consensus 26 ~~G~~v~L~C~~~-~p~~~v~W~k~g~~-~~~--~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~n 89 (113)
T 2cpc_A 26 VRLERVVLTCELC-RPWAEVRWTKDGEE-VVE--SPALLLQKE---DTVRRLVLPAVQLEDSGEYLCEIDD 89 (113)
T ss_dssp ETTCCEEEEEEES-CTTCCCEEEETTEE-CCC--BTTBEEEEC---SSEEEEEESSCCTTTCEEEEEESSS
T ss_pred EcCCeEEEEEEec-CCCCeEEEEECCEE-Ccc--CCCEEEEEC---CCEEEEEECCCCcccCEEEEEEEec
Confidence 4567788889885 78889999998753 221 234443221 2247899999999999999999854
No 348
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor, IG-like domain, immune system; 1.00A {Mus musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Probab=98.57 E-value=8.5e-08 Score=60.54 Aligned_cols=40 Identities=28% Similarity=0.604 Sum_probs=32.0
Q ss_pred ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 38 EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 38 ~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+|++|+.+..+ ..++.+|.|++++.+|+|.|.|.+..
T Consensus 60 ~~~~~~~R~~~~~~--~~~~~sL~I~~v~~~D~G~Y~C~v~~ 99 (119)
T 2pnd_A 60 QQAKYRGRLKVSHK--VPGDVSLQINTLQMDDRNHYTCEVTW 99 (119)
T ss_dssp CSGGGTTTEEECCS--STTBCCEEESSCCGGGCEEEEEEEEE
T ss_pred ecccccCcEEEccC--CCCCEEEEEccCCcccCEEEEEEEEE
Confidence 34568899987532 24688999999999999999999864
No 349
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.56 E-value=3.4e-07 Score=58.74 Aligned_cols=74 Identities=19% Similarity=0.320 Sum_probs=51.6
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCCC---CcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSYP---THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN 81 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~ 81 (145)
....+.++.+-|.+.+. +.+.+.||+... ...-....+|+....+ ......+|.|++++.+|+|.|+|.+.+..
T Consensus 11 ~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~-~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 89 (126)
T 3moq_A 11 TKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVN-KGSKSFSLRISDLRVEDSGTYKCQAFYVF 89 (126)
T ss_dssp EEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEE-TTTTEEEEEECSCCGGGCEEEEEEEEEEE
T ss_pred EEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEe-CCCCEEEEEECcCChHhCEEEEEEEEEcC
Confidence 45678889999998764 567899998531 1111224566665322 12357899999999999999999997643
No 350
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.56 E-value=1.8e-07 Score=58.41 Aligned_cols=70 Identities=17% Similarity=0.151 Sum_probs=49.3
Q ss_pred HhhhccceeeEEeecCCC-----ccEEEEecCCC---C--cc------cccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 7 VKSIFQMLSVGDFADDED-----IPVYIWYDSYP---T--HE------AEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p-----~p~~~w~k~~~---~--~~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
.+..+..+.+-|.+.+.+ .+.+.||+... . .+ ...+.+|+.+.. ...+.+|.|.+++.+|+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~v~~~Ds 88 (113)
T 1dlf_L 12 PVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG---SGTDFTLKISRVEAEDL 88 (113)
T ss_dssp EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEECSCCGGGC
T ss_pred EEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEc---cCCEEEEEECCCChHHC
Confidence 456778888899988665 36788987642 1 00 123456776532 23467899999999999
Q ss_pred EEEEEEEEE
Q psy534 71 GWYECKVVF 79 (145)
Q Consensus 71 G~Y~C~~~~ 79 (145)
|.|.|.+.+
T Consensus 89 G~Y~C~~~~ 97 (113)
T 1dlf_L 89 GVYFCSQST 97 (113)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEEec
Confidence 999999863
No 351
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.55 E-value=1.3e-07 Score=63.78 Aligned_cols=66 Identities=15% Similarity=0.151 Sum_probs=49.2
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcc-cCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTK-IRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~-v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|.+.|.|.|.+.|++++... . ...++.+... ....+|.|.+ ++.+|+|.|.|.+.+.
T Consensus 117 ~~g~~~~l~C~~~g~p~p~i~W~~~~~~~-~--~~~~~~~~~~---~~~~~L~i~~~~~~~d~G~Y~C~a~N~ 183 (197)
T 2j8h_A 117 LRGEVVSIKIPFSGKPDPVITWQKGQDLI-D--NNGHYQVIVT---RSFTSLVFPNGVERKDAGFYVVCAKNR 183 (197)
T ss_dssp ETTCCCEEEEEEEEESCCEEEEEESSCEE-C--SSSSCEEEEC---SSEEEEECTTCCCGGGCEEEEEEEEET
T ss_pred eCCCEEEEEEEEEecCCCcEEEEECCEEe-e--cCCCEEEEEc---CCceEEEEeCCCCcccCEeEEEEEEeC
Confidence 34667888899999999999999987542 2 1223333221 3478999999 9999999999999763
No 352
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.55 E-value=3.2e-07 Score=62.38 Aligned_cols=67 Identities=13% Similarity=0.046 Sum_probs=48.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|-+.|.|.|.+.|++++... ... .+..+... .....+|.|.+++.+|+|.|.|.+.+.
T Consensus 130 ~~g~~~~l~C~~~g~p~p~v~W~~~~~~~-~~~--~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~N~ 196 (212)
T 2r15_A 130 QEGKALNLTCNVWGDPPPEVSWLKNEKAL-AQT--DHCNLKFE--AGRTAYFTINGVSTADSGKYGLVVKNK 196 (212)
T ss_dssp ETTCCEEEEEEEECSSCCEEEEEETTEEE-CCC--SSEEEEEE--TTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred ccCCeEEEEEEEcCCCCceEEEEECCeEC-ccC--CCEEEEEc--CCCEEEEEEcCcchHHCeEEEEEEEcC
Confidence 34567788899999999999999998542 211 23333221 123568999999999999999999763
No 353
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=98.55 E-value=2.3e-07 Score=58.88 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=48.2
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---C--c-----------ccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---T--H-----------EAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~--~-----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+..+..+.+-|.+.+.+ ...+.||+... + . ....+++|+.+..+ ...+..+|.|.+++.+
T Consensus 13 ~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~ 91 (121)
T 2xt1_B 13 LVQAGGSLRLSCAASGSFFMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRD-DDKNILYLQMNDLKPE 91 (121)
T ss_dssp EEETTCCEEEEEEEESSSCCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGG
T ss_pred EEeCCCCEEEEEEecCeeccCceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEe-CCCCEEEEEECCCCHH
Confidence 345667777778776432 45677877431 1 0 11235678877543 2345789999999999
Q ss_pred CCEEEEEEEE
Q psy534 69 DQGWYECKVV 78 (145)
Q Consensus 69 D~G~Y~C~~~ 78 (145)
|+|.|+|.+.
T Consensus 92 DsG~Y~C~~~ 101 (121)
T 2xt1_B 92 DTAMYYCKAS 101 (121)
T ss_dssp GCEEEEEEET
T ss_pred HCEEEEEEEE
Confidence 9999999884
No 354
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.54 E-value=1e-07 Score=63.68 Aligned_cols=64 Identities=16% Similarity=0.142 Sum_probs=48.6
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|.+.|.|.|.+.|++++... . ...+..+. ..+.+|.|.+++.+|+|.|+|.+.+.
T Consensus 111 ~~g~~v~l~C~~~g~p~~~v~W~~~g~~~-~--~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~n~ 174 (189)
T 2v5t_A 111 ERGEEMTFSCRASGSPEPAISWFRNGKLI-E--ENEKYILK-----GSNTELTVRNIINSDGGPYVCRATNK 174 (189)
T ss_dssp TSCCCEEEECEEEEESCCEEEEEETTEEC-C--CSSSEEEE-----TTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCCcEEEEEEEccCCCCeEEEEECCEEC-c--CCCcEEEe-----cCCCEEEEcCCChhhCeeEEEEEEeC
Confidence 45677888999999999999999987532 1 12233332 23678999999999999999999753
No 355
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.54 E-value=3.8e-08 Score=68.00 Aligned_cols=71 Identities=7% Similarity=-0.055 Sum_probs=44.1
Q ss_pred HHhhhccceeeEEeecCCCc---cEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 6 AVKSIFQMLSVGDFADDEDI---PVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 6 ~~~~~~~~~~~~~w~~g~p~---p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
.....+..+.+.|.+.|.+. +.+.| ++... ... ..+......+.......+|.|.+++.+|+|.|+|.+.+
T Consensus 14 ~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~~~~~-~~~-~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~~~ 87 (214)
T 1ow0_A 14 EDLLLGSEANLTCTLTGLRDASGVTFTW-TPSSG-KSA-VQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAY 87 (214)
T ss_dssp HHHHHCSSCCCEEEETTCCSCCCCCCCB-SSCSS-CCC-EECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEECC
T ss_pred HHhccCCCcEEEEEEeeeECCCCeEEEE-cCCCC-CCc-ccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEEec
Confidence 44677889999999998743 68999 54321 111 00000000000001367899999999999999999853
No 356
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.54 E-value=9e-08 Score=72.99 Aligned_cols=64 Identities=16% Similarity=0.112 Sum_probs=39.1
Q ss_pred hhccceeeEEeecCCCcc----EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcc---cCCCC---CEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIP----VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTK---IRESD---QGWYECKVV 78 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p----~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~---v~~~D---~G~Y~C~~~ 78 (145)
..+.++.+.|-+.|.|.+ .+.|+|++..... ........ ..++.+.|.. +...| +|.|.|.|.
T Consensus 262 ~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~-~~~~~~~~------~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~ 334 (457)
T 1hzh_H 262 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHN-AKTKPREE------QYNSTYRVVSVLTVLHQDWLNGKEYKCKVS 334 (457)
T ss_dssp CTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECC-CEEEEEEE------CTTSCEEEEEEECCCHHHHHHTCCEEEEEE
T ss_pred ccCCceEEEEEEEcccCCCCceEEEEEeCCccccc-ccccccee------cCCCcEEEEEEEEECHHHccCCCcEEEEEe
Confidence 457788999999987543 8999999854211 11111111 1234444432 34555 999999997
Q ss_pred E
Q psy534 79 F 79 (145)
Q Consensus 79 ~ 79 (145)
+
T Consensus 335 n 335 (457)
T 1hzh_H 335 N 335 (457)
T ss_dssp C
T ss_pred C
Confidence 4
No 357
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.54 E-value=1.6e-07 Score=58.89 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=46.8
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCCC---C------------cccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSYP---T------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~~---~------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
.+..+..+.+-|.+.+. +.+.+.||+... . ....++.+|+.+.. ...+.+|.|.+++.+|+
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~~~~~Ds 88 (115)
T 2otu_A 12 SFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS---SGADRYLSISNIQPEDE 88 (115)
T ss_dssp ECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEE---ETTEEEEEESSCCGGGC
T ss_pred EECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEc---cCCEEEEEECCCChhHC
Confidence 34566777777777643 455677776421 1 11223456777642 23468899999999999
Q ss_pred EEEEEEEEE
Q psy534 71 GWYECKVVF 79 (145)
Q Consensus 71 G~Y~C~~~~ 79 (145)
|.|.|.+..
T Consensus 89 g~Y~C~~~~ 97 (115)
T 2otu_A 89 AIYICGVGD 97 (115)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEec
Confidence 999999975
No 358
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.54 E-value=1.7e-07 Score=63.59 Aligned_cols=67 Identities=16% Similarity=0.141 Sum_probs=47.9
Q ss_pred hhccceeeEEe-ecCCCccEEEEecCCC-Cccccccc------ceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDF-ADDEDIPVYIWYDSYP-THEAEEYK------GRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w-~~g~p~p~~~w~k~~~-~~~~~~~~------~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|- ..|.|.|.+.|++++. ........ .+... .....+|.|.+++.+|+|.|.|.+.+.
T Consensus 117 ~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 191 (212)
T 1f97_A 117 TIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTI-----DPKSGDLIFDPVTAFDSGEYYCQAQNG 191 (212)
T ss_dssp ETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEE-----CTTTCCEEESSCCGGGCEEEEEEEECS
T ss_pred CCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEe-----cCCCceEEEEecChhhCcEEEEEEccc
Confidence 45667888898 6799999999999986 42211110 22222 133788999999999999999999854
No 359
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.54 E-value=1.2e-07 Score=64.96 Aligned_cols=62 Identities=23% Similarity=0.230 Sum_probs=47.2
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+.++.+.|.+.|.|.|.+.|++++..... ...+..+ .+++|.|.+++.+|+|.|+|.+.+.
T Consensus 124 ~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~--~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~N~ 185 (212)
T 2yd1_A 124 VGHTVLMTCKAIGNPTPNIYWIKNQTKVDM--SNPRYSL-------KDGFLQIENSREEDQGKYECVAENS 185 (212)
T ss_dssp TTCCEEECCEEECSSCCEEEEEETTEECCT--TSTTEEE-------ETTEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCeEEEEEEeccCCCCeEEEEECCeEccc--CCCeEEc-------cCCeEEEccCChhhCEEEEEEeecC
Confidence 466778889999999999999999754221 1223332 2568999999999999999999863
No 360
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.53 E-value=8.9e-09 Score=61.36 Aligned_cols=56 Identities=16% Similarity=0.172 Sum_probs=42.7
Q ss_pred HHhhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEccc-CCCCCEEEEEEEE
Q psy534 6 AVKSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKI-RESDQGWYECKVV 78 (145)
Q Consensus 6 ~~~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v-~~~D~G~Y~C~~~ 78 (145)
++.-.+..+.+.|.+.|.|. ++|+|++... .. ..+.+|.|.++ +.+|+|.|.|.+.
T Consensus 9 ~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l-~~--------------~~~~~L~I~~v~~~~DsG~Y~C~A~ 65 (82)
T 3r08_E 9 KVSISGTSVELTCPLDSDEN--LKWEKNGQEL-PQ--------------KHDKHLVLQDFSEVEDSGYYVCYTP 65 (82)
T ss_dssp EEEEETTEEEEECSSCCCSS--CEEEETTEEC-TT--------------CCSSCCBCCSCCTTTTCSCEEEECS
T ss_pred eEEEcCCeEEEEEECCCCCc--EEEEECCEEC-cC--------------CCCCEEEECccCccCcCEEEEEEEc
Confidence 33445778889999999984 8999987431 11 12678999996 7899999999985
No 361
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.53 E-value=9.3e-08 Score=60.22 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=30.5
Q ss_pred ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 40 EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 40 ~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+++|+.+..+ ...++++|.|.+++.+|+|.|.|.+.+
T Consensus 64 ~~~~~R~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~v~~ 102 (124)
T 1neu_A 64 GTFKERIQWVGD-PSWKDGSIVIHNLDYSDNGTFTCDVKN 102 (124)
T ss_dssp STTTTCEEECCB-GGGTBCCEEECSCCGGGCEEEEEEEEC
T ss_pred ccccCcEEEecC-CcCCeEEEEEccCChhhCEEEEEEEEc
Confidence 356788887432 224578999999999999999999974
No 362
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.53 E-value=1.3e-07 Score=59.36 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=48.7
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCCC---Cc---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSYP---TH---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~~---~~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
.+..+..+.+-|.+.+. +.+.+.||+... .. ......+|+.+..+ ......+|.|.+++.+|+|.|
T Consensus 11 ~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~DsG~Y 89 (116)
T 1fo0_A 11 SVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQ-KPKSSIGLIITATQIEDSAVY 89 (116)
T ss_dssp EEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEE-GGGTEEEEEECSCCGGGCEEE
T ss_pred EEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEe-CCCCEEEEEECCCChhhCEEE
Confidence 34567777788887755 555788887531 00 01224577776421 234578999999999999999
Q ss_pred EEEEEE
Q psy534 74 ECKVVF 79 (145)
Q Consensus 74 ~C~~~~ 79 (145)
.|.+..
T Consensus 90 ~C~~~~ 95 (116)
T 1fo0_A 90 FCAMRG 95 (116)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 999874
No 363
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.53 E-value=1.5e-07 Score=60.00 Aligned_cols=70 Identities=17% Similarity=0.203 Sum_probs=49.0
Q ss_pred HhhhccceeeEEeecCCC----ccEEEEecCCC---Cc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 7 VKSIFQMLSVGDFADDED----IPVYIWYDSYP---TH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p----~p~~~w~k~~~---~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
.+..+..+.+-|.+.+.+ .+.+.||+... .. ....+.+|+.+.. .....+|.|.+++.+|+|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~---~~~~~sL~I~~v~~~DsG 88 (126)
T 4ffy_L 12 AVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSG---SETDFTLTIDSVETDDAA 88 (126)
T ss_dssp EEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE---ETTEEEEEESSCCGGGCE
T ss_pred EEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec---CCCEEEEEECCCCHHHCE
Confidence 356677888889888765 56788988531 10 0123456666532 235789999999999999
Q ss_pred EEEEEEEE
Q psy534 72 WYECKVVF 79 (145)
Q Consensus 72 ~Y~C~~~~ 79 (145)
.|+|.+.+
T Consensus 89 ~Y~C~~~~ 96 (126)
T 4ffy_L 89 TYYCQQNN 96 (126)
T ss_dssp EEEEEECS
T ss_pred EEEEEEec
Confidence 99999863
No 364
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.52 E-value=2.2e-07 Score=63.10 Aligned_cols=64 Identities=14% Similarity=0.270 Sum_probs=48.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+..+.+.|.+.+.| |.+.|++++... . ...++.+.. .+.+|.|.+++.+|+|.|+|.+.+.
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l-~--~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~ 185 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLFNSQSL-Q--LTERMTLSQ-----NNSILRIDPIKREDAGEYQCEISNP 185 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEETTEEC-C--CCSSEEEET-----TTTEEEESSCCGGGCEEEEEEEECT
T ss_pred EeeCCCEEEEEECCCCC-CceEEEECCEeC-C--CCCCeEEcC-----CCCEEEEeccCHHhCeEEEEEEecC
Confidence 34566788899999876 799999987432 1 234555432 2588999999999999999999864
No 365
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.52 E-value=1.7e-07 Score=63.12 Aligned_cols=61 Identities=21% Similarity=0.294 Sum_probs=46.6
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+..+.+.|.+.|.|.|.+.|++++.. +... ..+. ..+.+|.|.+++.+|+|.|+|.+.+.
T Consensus 127 ~g~~~~l~C~~~g~p~p~v~W~~~~~~-~~~~----~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~ 187 (201)
T 3s97_C 127 MGQNVTLECFALGNPVPDIRWRKVLEP-MPST----AEIS-----TSGAVLKIFNIQLEDEGIYECEAENI 187 (201)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTBC-CCTT----CEEE-----TTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCcEEEEEEccCCCCCceEEEeCCCc-CCCc----eeec-----CCCCEEEEccCChhhCEEEEEEEEec
Confidence 456678889999999999999999853 2211 1221 23678999999999999999999763
No 366
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.52 E-value=3.2e-07 Score=63.77 Aligned_cols=72 Identities=14% Similarity=0.198 Sum_probs=50.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC-C--c-c-------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP-T--H-E-------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~--~-~-------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+..+.+.|.+.|.|.|.+.|||+.. . . + .....+|+.+..+ ......+|.|.+++.+|+|.|+|.
T Consensus 139 v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~ 217 (238)
T 2p1y_A 139 VWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFN-KREKKLSLHIADSQPGDSATYFCA 217 (238)
T ss_dssp EETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEE-TTTTEEEEEETTCCGGGCEEEEEE
T ss_pred EeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEec-CCCCeEEEEEcCCCHHHCEEEEEE
Confidence 3456778888999999999999999642 1 0 0 0112455554311 123468899999999999999999
Q ss_pred EEEe
Q psy534 77 VVFL 80 (145)
Q Consensus 77 ~~~~ 80 (145)
+.+.
T Consensus 218 a~n~ 221 (238)
T 2p1y_A 218 AIDT 221 (238)
T ss_dssp EEET
T ss_pred EeeC
Confidence 9863
No 367
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.52 E-value=1.5e-07 Score=60.07 Aligned_cols=74 Identities=12% Similarity=0.100 Sum_probs=47.7
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCCCCc---cccc---ccceEEEecCCC--CCCeeeEEEcccCCCCCEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSYPTH---EAEE---YKGRISRVDKES--PFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~~~~---~~~~---~~~R~~~~~~~~--~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
.+..+..+.+-|.+.+. +.+.+.||++.... +... ...|+....+.. .....+|.|.+++.+|+|.|+|.+
T Consensus 14 ~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 93 (127)
T 2jju_A 14 SVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVK 93 (127)
T ss_dssp EEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCEEEEEEE
T ss_pred EEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCEEEEEEE
Confidence 45567788888998865 56789999875321 1100 002444321111 124788999999999999999999
Q ss_pred EEe
Q psy534 78 VFL 80 (145)
Q Consensus 78 ~~~ 80 (145)
.+.
T Consensus 94 ~~~ 96 (127)
T 2jju_A 94 FRK 96 (127)
T ss_dssp EEC
T ss_pred EcC
Confidence 753
No 368
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.51 E-value=9.1e-08 Score=59.69 Aligned_cols=71 Identities=18% Similarity=0.186 Sum_probs=46.3
Q ss_pred hhhccceeeEEeecC-CCccEEEEecCCCC--------------cccccccceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 8 KSIFQMLSVGDFADD-EDIPVYIWYDSYPT--------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g-~p~p~~~w~k~~~~--------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
+..+..+.+-|.+.+ .+.+.+.||+.... .......+|+.+.. +...++.+|.|.+++.+|+|.
T Consensus 9 ~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~sL~I~~v~~~DsG~ 87 (116)
T 2or8_A 9 GVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKG-HISEGDVSLTIENSVESDSGL 87 (116)
T ss_dssp EETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCS-CGGGTBCCEEESSCCGGGCEE
T ss_pred EEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEec-CCCCCeEEEEECCCCcccCEE
Confidence 445667777777664 33456788876511 01122456776532 123457899999999999999
Q ss_pred EEEEEEE
Q psy534 73 YECKVVF 79 (145)
Q Consensus 73 Y~C~~~~ 79 (145)
|+|.+.+
T Consensus 88 Y~C~v~~ 94 (116)
T 2or8_A 88 YCCRVEI 94 (116)
T ss_dssp EEEEECC
T ss_pred EEEEEEc
Confidence 9999963
No 369
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.51 E-value=2.2e-07 Score=57.59 Aligned_cols=72 Identities=22% Similarity=0.184 Sum_probs=49.8
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCCCC-----ccc-----ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSYPT-----HEA-----EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~~~-----~~~-----~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+..+.+-|.+.+. +.+.+.||+.... .+. ..+.+|+.+..+ ...+..+|.|.+++.+|+|.|+|
T Consensus 7 ~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~DsG~Y~C 85 (110)
T 2q87_A 7 AGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDS-PANLSFTVTLENLTEEDAGTYWC 85 (110)
T ss_dssp EECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEE-GGGTEEEEEESSCCGGGCEEEEE
T ss_pred EEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEc-CcCCEEEEEEccCCHHHCEEEEE
Confidence 34567788888988753 3467899987521 000 015678876432 22346899999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+..
T Consensus 86 ~~~~ 89 (110)
T 2q87_A 86 GVDT 89 (110)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9974
No 370
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.51 E-value=3.8e-07 Score=57.08 Aligned_cols=72 Identities=21% Similarity=0.283 Sum_probs=50.5
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---CcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
.+..+.++.+-|.+.+.+ .+.+.||++.. ...-....+|+.+..+ ......+|.|.+++.+|+|.|+|.+.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 11 TKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVN-SGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp EECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEE-TTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred EEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEe-CCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 456788999999998654 56799998742 1100112457654321 234578999999999999999999874
No 371
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.51 E-value=6.3e-07 Score=72.36 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=79.3
Q ss_pred cceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEecC-----CC--
Q psy534 12 QMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLNR-----SP-- 84 (145)
Q Consensus 12 ~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~-----~~-- 84 (145)
..+.+.|-+.|.|.|.+.|.+++... ......++.+.. ....+.+|.|..+...|.|.|.|....... +|
T Consensus 92 g~l~v~c~~~g~P~p~i~W~k~g~~~-~~~~~~~~~i~~--~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~ 168 (731)
T 2v5y_A 92 GLLNVYVKVNNGPLGNPIWNISGDPT-RTWNRAELAIST--FWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHF 168 (731)
T ss_dssp EEEEEEEEETTCCCCSEEEEECCCCC-SSCEEEEEEECC--CTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEE
T ss_pred ceEEEEEecCCCCccceeEEEeCCcC-CceeEEEEEEee--cCCCceEEEEEEEecCCceEEEEeeEEeeeccccccccc
Confidence 35677888889999999999998542 222234444421 113466788888999999999986543321 11
Q ss_pred ----C-CCCCCcEEEEEEeE----------Ee--cCC-----------------cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 85 ----N-SHKNGTWFHLDVHG----------VF--NDG-----------------TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 85 ----~-~~~~g~~~~l~c~~----------~~--~~~-----------------~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+ ....|+.+.|.|.. .. .++ ..|.|.++..+|+|.|+|.|.|..|
T Consensus 169 ~~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G 247 (731)
T 2v5y_A 169 LRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGG 247 (731)
T ss_dssp CCCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTE
T ss_pred ccccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCC
Confidence 1 12358899999981 11 111 3689999999999999999999988
No 372
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.50 E-value=1.7e-07 Score=60.95 Aligned_cols=70 Identities=14% Similarity=0.163 Sum_probs=48.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCccc-----ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEA-----EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~-----~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+..+.+.|.+.+.|.+.+.|++.+...+. ....+|+.+... ...+.+|.|.+++.+|+|.|+|.+.+
T Consensus 50 v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~n 124 (145)
T 1z9m_A 50 VVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTS--TPHELSISISNVALADEGEYTCSIFT 124 (145)
T ss_dssp EETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEE--CSSEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecC--CCCeEEEEECCCChhhCEEEEEEEEc
Confidence 45677888999999988889999954321110 011245554321 23478999999999999999999964
No 373
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=98.50 E-value=2.8e-06 Score=58.49 Aligned_cols=118 Identities=19% Similarity=0.162 Sum_probs=69.4
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC-C----cc------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP-T----HE------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~-~----~~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+..+.+-|.+.+.+...+.||+... . .+ ...+.+|+.+..+ ...++.+|.|++++.+|+|.|+|
T Consensus 11 ~v~~G~~v~L~C~~s~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~v~~~Dsg~Y~C 89 (203)
T 2bnu_A 11 SVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLD-KSSGRSTLYIAASQPGDSATYLC 89 (203)
T ss_dssp EEETTCCEEEEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEE-TTTTEEEEEESSCCGGGCEEEEE
T ss_pred EEeCCCCEEEEEEECCCCcceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEc-CCCCEEEEEEeeCCcccCeEEEE
Confidence 34567788888888766556788887541 1 00 1135678877533 33557899999999999999999
Q ss_pred EEEEecCCCCCCCCCcEEEEEEeEE-ecCCcEEEEcccCCCCCeeeEEEEec
Q psy534 76 KVVFLNRSPNSHKNGTWFHLDVHGV-FNDGTELRISNIRSQDIGDYTCLATH 126 (145)
Q Consensus 76 ~~~~~~~~~~~~~~g~~~~l~c~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n 126 (145)
.+............|....|..... ....+.+.+... .+......|.+..
T Consensus 90 ~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~-~~~~~~L~C~~~g 140 (203)
T 2bnu_A 90 AVRPTSGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLRR-SKSSDKSVCLFTD 140 (203)
T ss_dssp EEEECSSSTTCCEECCCEEEEEECCCSSCCCEEEEECC-SSSSSCEEEEEES
T ss_pred EEEcCcCcceeeeeCCCEEEEEeCCCCCCCCeEEecCC-CCCCcEEEEEccc
Confidence 9975311011112233345544322 112234444322 2235678999876
No 374
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.49 E-value=2.6e-07 Score=62.63 Aligned_cols=67 Identities=7% Similarity=0.055 Sum_probs=46.2
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~ 81 (145)
..+.++.+.|.+.+. .+.+.|+|++..........+.... .....|.|.+++.+|+|.|+|.+.+..
T Consensus 112 ~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 178 (196)
T 3p2t_A 112 TSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQ-----QHQAEFPMSPVTSVHGGTYRCFSSHGF 178 (196)
T ss_dssp CTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEE-----EEEEEEEECSCCGGGCEEEEEEEECGG
T ss_pred cCCCeEEEEEecCCC-CCEEEEEeCCCcccceeeccccccc-----CcceEEEeCCCcccCCCeEEEEEEcCC
Confidence 456678888988774 4679999998543221111111111 237889999999999999999998754
No 375
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.49 E-value=3.2e-07 Score=57.31 Aligned_cols=69 Identities=12% Similarity=0.063 Sum_probs=47.0
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---C--cc---------ccccc-ceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---T--HE---------AEEYK-GRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~--~~---------~~~~~-~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
.+..+..+.+-|.+.+.+.+.+.||+... + .+ ..+++ +|+.+..+ ..+ +|.|.+++.+|+|
T Consensus 12 ~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~---~~~-~L~I~~~~~~Dsg 87 (112)
T 1fo0_B 12 LVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRV---TDT-ELRLQVANMSQGR 87 (112)
T ss_dssp ECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEE---ETT-EEEEEEESCCSCE
T ss_pred EEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcC---CCC-eEEEcCCCHhHCE
Confidence 45677788888888765667788887531 1 00 01133 67765432 123 8999999999999
Q ss_pred EEEEEEEE
Q psy534 72 WYECKVVF 79 (145)
Q Consensus 72 ~Y~C~~~~ 79 (145)
.|+|.+..
T Consensus 88 ~Y~C~~~~ 95 (112)
T 1fo0_B 88 TLYCTCSA 95 (112)
T ss_dssp EEEEEEES
T ss_pred EEEEEEEc
Confidence 99999863
No 376
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=98.49 E-value=4.4e-07 Score=57.27 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=47.1
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+.+ ...+.||+... . .....+++|+.+..+ ......+|.|.+++.+|
T Consensus 12 ~~~G~~v~L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~D 90 (120)
T 1mfa_H 12 ARPGASVKMSCKASGYTFTNYWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAV-TSTTTAYMELSSLTSED 90 (120)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EeCCCCEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEe-CCCCEEEEEECCCCHHH
Confidence 45566677777766432 35677776421 0 012345678877533 33457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 91 sg~Y~C~~~~ 100 (120)
T 1mfa_H 91 SAVYYCTRGG 100 (120)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEec
Confidence 9999999864
No 377
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.49 E-value=2.1e-07 Score=62.43 Aligned_cols=66 Identities=12% Similarity=0.029 Sum_probs=48.0
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|-+.|.|.|.+.|++++... .. ..+..+..+ ....+|.|.+++.+|+|.|+|.+.+.
T Consensus 116 ~~g~~~~l~C~~~g~p~~~v~W~~~~~~~-~~--~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~ 181 (194)
T 2a38_A 116 RQGSQVRLQVRVTGIPTPVVKFYRDGAEI-QS--SLDFQISQE---GDLYSLLIAEAYPEDSGTYSVNATNS 181 (194)
T ss_dssp CTTEEEEEEEEEEEESCCEEEEEETTEEC-CC--SSSEEEEEE---TTEEEEEEEEECGGGCEEEEEEEEET
T ss_pred cCCCEEEEEEEEEEecCCeEEEEECCEEC-CC--CCcEEEEEc---CCEEEEEECCCChhcCeEEEEEEEeC
Confidence 34567788899999999999999987542 21 223333221 22458999999999999999999763
No 378
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.48 E-value=1.4e-07 Score=66.77 Aligned_cols=70 Identities=16% Similarity=0.053 Sum_probs=42.5
Q ss_pred hhccceeeEEeecCC---C-ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDE---D-IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~---p-~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+.++.+.|.+.|. | ...+.|++++..... ....+.....+..-.....|.|......|.|.|.|++.+
T Consensus 37 ~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~-~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h 110 (240)
T 4acp_A 37 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHN-AKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSN 110 (240)
T ss_dssp SSSSCCEEEEEEESCCC--CCCEEEEEETTEEECC-CEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEEC
T ss_pred ccCCCcEEEEEEeccccCCCccEEEEEECCcccCC-ceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEc
Confidence 357789999999975 3 337999999754211 111111110000001145688888888899999999965
No 379
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.48 E-value=2.8e-07 Score=59.53 Aligned_cols=68 Identities=21% Similarity=0.355 Sum_probs=48.1
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC--C-cccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP--T-HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~--~-~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
....+..+.+-|.+.+. +.+.||++.. . ..-....+|+....+ ....+|.|.+++.+|+|.|+|.+.+
T Consensus 28 ~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~---~~~~~L~I~~~~~~DsG~Y~C~a~n 98 (133)
T 3khq_A 28 AKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQN---GSVYTLTIQNIQYEDNGIYFCKQKC 98 (133)
T ss_dssp EECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEE---TTEEEEEECSCCGGGCEEEEEEESS
T ss_pred EEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcC---CCEEEEEECCCChHHCEEEEEEEEe
Confidence 34567788889999877 7899998742 1 000113466665432 2467899999999999999999964
No 380
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.48 E-value=2.6e-07 Score=70.42 Aligned_cols=65 Identities=23% Similarity=0.273 Sum_probs=49.0
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCccc-ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEA-EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~-~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|.+ +.|.|.+.|+++++.... ....+|+... .+++|.|.+++.+|+|.|+|.|.+.
T Consensus 354 ~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~------~~~~L~I~~v~~~D~G~Y~C~a~N~ 419 (440)
T 3zyj_A 354 TEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVL------SDGTLNFTNVTVQDTGMYTCMVSNS 419 (440)
T ss_dssp CTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEEC------TTCCEEESSCCSTTCEEEEEEEECS
T ss_pred ccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEc------cCCeEEEccCChhhCEEEEEEEEcC
Confidence 456677788888 578999999996654332 2344566652 3678999999999999999999753
No 381
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.48 E-value=4e-07 Score=61.75 Aligned_cols=68 Identities=10% Similarity=0.066 Sum_probs=43.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~ 81 (145)
..+..+.+.|.+.|. .+.+.|+|++........ +.....+ ......|.|.+++.+|+|.|.|.+.+..
T Consensus 113 ~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~--~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 180 (198)
T 1ugn_A 113 NSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCL--NSQPHAR--GSSRAIFSVGPVSPSRRWWYRCYAYDSN 180 (198)
T ss_dssp ETTCCEEEEEECSSC-CSEEEEEEC------CEE--EC--------CCEEEEEECCCCTTSCEEEEEEEECTT
T ss_pred CCCCcEEEEEecCCC-CcEEEEEECCCccCCccc--cccccCC--CcceeEEEecccCcccCeEEEEEEEeCC
Confidence 456778889999888 789999999854211111 1111100 1125889999999999999999998643
No 382
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.48 E-value=2.3e-07 Score=58.60 Aligned_cols=70 Identities=17% Similarity=0.162 Sum_probs=48.5
Q ss_pred HhhhccceeeEEeecCCC---ccEEEEecCCCC-----c------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 7 VKSIFQMLSVGDFADDED---IPVYIWYDSYPT-----H------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p---~p~~~w~k~~~~-----~------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
.+..+..+.+-|.+.+.+ .+.+.||+...- . ....+.+|+.+.. .....+|.|.+++.+|+|.
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~---~~~~~~L~I~~~~~~DsG~ 87 (120)
T 1oaq_L 11 TTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL---IGNKAALTITGAQTEDEAI 87 (120)
T ss_dssp EECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEE---ETTEEEEEEESCCGGGCEE
T ss_pred EEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEec---CCCeEEEEECCCChhhCeE
Confidence 345677888888887654 567888875320 0 1122456776542 1346799999999999999
Q ss_pred EEEEEEE
Q psy534 73 YECKVVF 79 (145)
Q Consensus 73 Y~C~~~~ 79 (145)
|+|.+..
T Consensus 88 Y~C~~~~ 94 (120)
T 1oaq_L 88 YFCALWY 94 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 9999864
No 383
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.48 E-value=2.4e-07 Score=57.79 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=48.9
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc-c-------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH-E-------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~-~-------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+..+.+-|.+.+.+.+.+.||+... .. + .....+|+.+..+ ......+|.|.+++.+|+|.|+|
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~~~~~DsG~Y~C 89 (112)
T 2z35_A 11 ALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYN-KEATSFHLQKASVQESDSAVYYC 89 (112)
T ss_dssp EEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECB-TTTTBCCEEESSCCSTTCSEEEE
T ss_pred EEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEc-CCCCEEEEEECCCChhhCEEEEE
Confidence 34567777888887766667788887542 10 0 0113567776422 33457899999999999999999
Q ss_pred EEE
Q psy534 76 KVV 78 (145)
Q Consensus 76 ~~~ 78 (145)
.+.
T Consensus 90 ~~~ 92 (112)
T 2z35_A 90 ALS 92 (112)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 384
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate binding, immune system; HET: SIA GAL GLC; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A* 1qfp_A 2bve_A* 1url_A*
Probab=98.47 E-value=3.6e-07 Score=57.37 Aligned_cols=39 Identities=18% Similarity=0.417 Sum_probs=31.4
Q ss_pred ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 40 EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 40 ~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+++|+.+..+ ...++.+|.|.+++.+|+|.|.|.+..
T Consensus 62 ~~~~~R~~~~~~-~~~~~~sL~I~~v~~~Dsg~Y~C~v~~ 100 (119)
T 1qfo_A 62 KRFRGRAELMGN-MDHKVCNLLLKDLKPEDSGTYNFRFEI 100 (119)
T ss_dssp TTTTTTEEECSC-GGGTBCCEEECSCCGGGCEEEEEEEEC
T ss_pred ccceeeEEEeCC-CCCCEEEEEEccCCcccCceEEEEEEe
Confidence 457789987543 234688999999999999999999863
No 385
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.47 E-value=5.5e-07 Score=60.22 Aligned_cols=55 Identities=16% Similarity=0.147 Sum_probs=45.7
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+.++.+.|.+.+.|.|.+.|++++... . ....+|.|.+++.+|+|.|+|.+.+
T Consensus 110 ~~g~~~~l~C~~~~~p~~~v~W~~~~~~~---------~-------~~~~~L~i~~v~~~d~G~Y~C~a~n 164 (184)
T 2ny1_B 110 LQGQSLTLTLESPPGSSPSVQCRSPRGKN---------I-------QGGKTLSVSQLELQDSGTWTCTVLQ 164 (184)
T ss_dssp ETTCCEEEEEECCTTCCCEEEEECTTSCE---------E-------EESSEEEESSCCGGGCEEEEEEEEE
T ss_pred ecCCCEEEEEEcCCCCCCEEEEEeCCCcc---------c-------cCceEEEEecCCcCCCeEEEEEEEE
Confidence 45667889999999999999999987431 1 1278899999999999999999974
No 386
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.47 E-value=2e-07 Score=65.84 Aligned_cols=70 Identities=19% Similarity=0.345 Sum_probs=49.7
Q ss_pred hhccceeeEEee---cCCCccEEEEecCCCCc-------------------ccccccceEEEecCCCCCCeeeEEEcccC
Q psy534 9 SIFQMLSVGDFA---DDEDIPVYIWYDSYPTH-------------------EAEEYKGRISRVDKESPFGMASLNLTKIR 66 (145)
Q Consensus 9 ~~~~~~~~~~w~---~g~p~p~~~w~k~~~~~-------------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~ 66 (145)
..+.++.+.|.+ .+.|.|.+.|++++... ....|..|+.+..+ ....+.+|.|.+++
T Consensus 131 ~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~i~~v~ 209 (268)
T 3mj6_A 131 RVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGD-ISRNDGSIKLQTVK 209 (268)
T ss_dssp ETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSC-GGGTBCCEEECSCC
T ss_pred ccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeecc-CCCCeEEEEECcCC
Confidence 356677888988 57799999999853211 11234556555321 22457899999999
Q ss_pred CCCCEEEEEEEEE
Q psy534 67 ESDQGWYECKVVF 79 (145)
Q Consensus 67 ~~D~G~Y~C~~~~ 79 (145)
.+|+|.|.|.+.+
T Consensus 210 ~~D~G~Y~C~a~n 222 (268)
T 3mj6_A 210 ESDQGIYTCSIYV 222 (268)
T ss_dssp GGGCEEEEEEEEE
T ss_pred hhhCeEEEEEEEc
Confidence 9999999999975
No 387
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.47 E-value=1.6e-07 Score=62.87 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=47.3
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+.++.+.|.+.|.|.+.+.|++++... . ...+... ..+++|.|.+++.+|+|.|+|.+.+.
T Consensus 114 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~-~--~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~a~n~ 175 (192)
T 2iep_A 114 EGLKAVLPCTTMGNPKPSVSWIKGDSAL-R--ENSRIAV------LESGSLRIHNVQKEDAGQYRCVAKNS 175 (192)
T ss_dssp TTSCEEECCEEEEESCCEEEEEETTEEC-C--CCSSEEE------CTTSCEEESSCCGGGCEEEEEEEEET
T ss_pred CCCcEEEEEEEeccCCceEEEEeCCEEc-c--CCCcEEE------ecCCcEEEecCChhhCEEEEEEEEcC
Confidence 4566778898889999999999987532 1 1234443 23568999999999999999999864
No 388
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=98.47 E-value=1.2e-06 Score=62.35 Aligned_cols=21 Identities=19% Similarity=0.398 Sum_probs=19.6
Q ss_pred eeeEEEcccCCCCCEEEEEEE
Q psy534 57 MASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 57 ~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
+.+|.|++++.+|++.|+|..
T Consensus 70 ~ftLtIs~lq~eD~A~YyC~~ 90 (259)
T 4f9l_D 70 GFTLTISSLQPEDIATYYCQQ 90 (259)
T ss_dssp EEEEEEESCCGGGCEEEEEEE
T ss_pred eEEEEEcccChhhCEEEEEee
Confidence 678999999999999999976
No 389
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.46 E-value=7.3e-08 Score=60.33 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=28.7
Q ss_pred cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 41 EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 41 ~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
.+.+|+.+.. +...++.+|.|.+++.+|+|.|+|.+.
T Consensus 58 ~~~~r~~~~~-~~~~~~~sL~I~~v~~~DsG~Y~C~v~ 94 (115)
T 2or7_A 58 QRNSRYQLKG-NISEGNVSLTIENTVVGDGGPYCCVVE 94 (115)
T ss_dssp ESSTTEECCS-CGGGTBCCEEESSCCGGGCEEEEEEEC
T ss_pred ccCccEEEec-CccCCeEEEEEccCCHHHCEEEEEEEE
Confidence 3567777532 233457899999999999999999986
No 390
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.46 E-value=2.5e-07 Score=62.74 Aligned_cols=63 Identities=10% Similarity=0.061 Sum_probs=46.1
Q ss_pred hhccceeeEEee-cCCCccEEEEecCCCC-cccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFA-DDEDIPVYIWYDSYPT-HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~-~g~p~p~~~w~k~~~~-~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|.+ .|.|.|.+.|++++.. .+... + .. ...+++|.|.+++.+|+|.|+|.|.+.
T Consensus 134 ~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~---~-~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~N~ 198 (214)
T 3jz7_A 134 EIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTP---W-LA-----EMTSPVISVKNASSEYSGTYSCTVQNR 198 (214)
T ss_dssp BTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGG---G-GG-----GTTSSEEEECSCCGGGCEEEEEEEECS
T ss_pred ecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcc---c-ee-----ccCCCEEEEecCCHHHCEEEEEEEEcC
Confidence 456678899999 6999999999996432 11111 1 11 123669999999999999999999753
No 391
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=2e-07 Score=60.05 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=47.0
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCCCCcccccc--c----ceEEEecCCC--CCCeeeEEEcccCCCCCEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSYPTHEAEEY--K----GRISRVDKES--PFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~~~~~~~~~--~----~R~~~~~~~~--~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
.+..+..+.+-|.+.+. +.+.+.||++.......-+ . +|+....+.. ...+.+|.|.+++.+|+|.|+|.+
T Consensus 19 ~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 98 (136)
T 2d9c_A 19 SVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVK 98 (136)
T ss_dssp EEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEEEEEEE
T ss_pred EEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 34567778888888765 5667899987632100000 0 2443322111 123688999999999999999998
Q ss_pred EE
Q psy534 78 VF 79 (145)
Q Consensus 78 ~~ 79 (145)
.+
T Consensus 99 ~~ 100 (136)
T 2d9c_A 99 FR 100 (136)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 392
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.45 E-value=5.2e-07 Score=63.51 Aligned_cols=71 Identities=18% Similarity=0.185 Sum_probs=50.4
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC--Cc--------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP--TH--------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~--~~--------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+.|.+.+.+ .+.+.||++.. .. ....+.+|+.+..+ ......+|.|.+++.+|
T Consensus 146 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D 224 (256)
T 3ux9_B 146 VQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRD-NSKNTLYLQMNSLRAED 224 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEec-CCCCEEEEEECCCChhh
Confidence 34567788889998876 78999998631 11 01234457765432 12346779999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 225 sG~Y~C~~~~ 234 (256)
T 3ux9_B 225 TAVYYCARYI 234 (256)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEc
Confidence 9999999986
No 393
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.45 E-value=3.8e-07 Score=56.78 Aligned_cols=72 Identities=19% Similarity=0.147 Sum_probs=48.7
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCCCC-----cc------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSYPT-----HE------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~~~-----~~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
.+..+..+.+-|.+.+. ....+.||+.... .+ ...+.+|+.+..+ ...+..+|.|.+++.+|+|.|+
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~~~~~DsG~Y~ 90 (113)
T 1zox_A 12 SGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDN-QRDFIFTVTMEDLRMSDAGIYW 90 (113)
T ss_dssp EEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEE-TTTTEEEEEECSCCGGGCEEEE
T ss_pred EEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEEC-CcCCEEEEEEccCCHHHCEEEE
Confidence 34566777788887643 2335788876521 00 1235678876532 3455789999999999999999
Q ss_pred EEEEE
Q psy534 75 CKVVF 79 (145)
Q Consensus 75 C~~~~ 79 (145)
|.+..
T Consensus 91 C~v~~ 95 (113)
T 1zox_A 91 CGITK 95 (113)
T ss_dssp EEECC
T ss_pred EeeEc
Confidence 99863
No 394
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=98.45 E-value=6.7e-07 Score=56.02 Aligned_cols=59 Identities=17% Similarity=0.178 Sum_probs=41.0
Q ss_pred eeeEEeecCCCccEEEEecCCC------CcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 14 LSVGDFADDEDIPVYIWYDSYP------THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 14 ~~~~~w~~g~p~p~~~w~k~~~------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.|..+. ....++++.. ...++.|++|+.+. .++++|.|.|++.+|+|.|.|++..
T Consensus 29 ~~~i~W~~~~--~ia~~~~~~~~~~~~~~~~~~~f~~Rl~l~-----~~~~SL~I~nl~~~DsG~Y~c~i~~ 93 (111)
T 2pkd_A 29 VKIIAWTSKT--SVAYVTPGDSETAPVVTVTHRNYYERIHAL-----GPNYNLVISDLRMEDAGDYKADINT 93 (111)
T ss_dssp EEEEEEESSS--EEEEEECCCSSSCCEEEECSGGGTTCEEEC-----TTTCCEEECSCCGGGCEEEEEEEEE
T ss_pred eeEEEEecCC--EEEEEECCCCCCcceeEEeCCCcCCcEEEe-----CCCEEEEECCCCHHHCEEEEEEEEe
Confidence 4456677432 3333333332 12356799999984 3489999999999999999999963
No 395
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.45 E-value=2.4e-07 Score=60.94 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=50.3
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
++..+.++.+-|.+.+.+.+.+.||+... .. + ...+.+|+.+.. .....+|.|.+++.+|+|.|+|
T Consensus 27 ~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~---~~~~~sL~I~~v~~~DsG~Y~C 103 (146)
T 2yc1_B 27 SVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSG---SGTDFTLTISSLEPEDFAIYYC 103 (146)
T ss_dssp EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCSEEEE
T ss_pred EEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEec---CCCEEEEEECCCCHHHCEEEEE
Confidence 45677888899998877777889998642 10 0 112456776532 2346789999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 104 ~~~~ 107 (146)
T 2yc1_B 104 QQYR 107 (146)
T ss_dssp EECS
T ss_pred EEec
Confidence 9863
No 396
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.45 E-value=1.9e-07 Score=58.80 Aligned_cols=74 Identities=14% Similarity=0.091 Sum_probs=46.6
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCCCC---cccc---cccceEEEecC--CCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSYPT---HEAE---EYKGRISRVDK--ESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~~~---~~~~---~~~~R~~~~~~--~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
.+..+..+.+-|.+.+. +.+.+.||++... .+.. ....|+....+ .......+|.|.+++.+|+|.|+|.+
T Consensus 18 ~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 97 (120)
T 2yz1_A 18 SVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDAGTYYCVK 97 (120)
T ss_dssp EECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGCEEEEEEE
T ss_pred EEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHCEEEEEEE
Confidence 34567788888988764 6678999987522 1100 00012222111 01133578999999999999999999
Q ss_pred EEe
Q psy534 78 VFL 80 (145)
Q Consensus 78 ~~~ 80 (145)
.+.
T Consensus 98 ~~~ 100 (120)
T 2yz1_A 98 FQK 100 (120)
T ss_dssp EEC
T ss_pred EcC
Confidence 753
No 397
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=98.44 E-value=8.9e-07 Score=56.07 Aligned_cols=71 Identities=17% Similarity=0.174 Sum_probs=47.0
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. ....+.||+... + .....+++|+.+..+ ......+|.|.+++.+|
T Consensus 14 ~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~D 92 (123)
T 2p45_B 14 VQAGGSLRLSCAASGYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRMTISRD-KGKNTVYLQMDSLKPED 92 (123)
T ss_dssp EETTCCEEEEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTSCSCEECTTTBTTEEEECC-TTSSEEEEEESSCCGGG
T ss_pred EeCCCCEEEEEEecCccCcCcEEEEEEECCCCCcEEEEEEecCCCceEeCcccCCeEEEEEe-CCCCEEEEEECCCCHHH
Confidence 4456667777776643 245677776431 1 011235678887543 23457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 93 sg~Y~C~~~~ 102 (123)
T 2p45_B 93 TATYYCAAGG 102 (123)
T ss_dssp CEEEEEEESS
T ss_pred CEEEEEEEEe
Confidence 9999998863
No 398
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.44 E-value=3.2e-06 Score=65.72 Aligned_cols=70 Identities=7% Similarity=-0.030 Sum_probs=44.4
Q ss_pred hccceeeEEeecCC-C-ccEEEEecCCCCcccccccceEEEecCCCC-CCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADDE-D-IPVYIWYDSYPTHEAEEYKGRISRVDKESP-FGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g~-p-~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~-~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+..+.+.|.+.|. | ...+.|++++.... ............+.. .....|.|..+..+|.|.|.|++.+.
T Consensus 311 ~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~-~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~ 383 (512)
T 1zvo_C 311 LRDKATFTCFVVGSDLKDAHLTWEVAGKVPT-GGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHP 383 (512)
T ss_pred cCCceEEEEEEeceECCCeEEEEEECCEecc-CceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeC
Confidence 46788899999986 4 23899999985422 111111011001000 11456999999999999999999764
No 399
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.44 E-value=7.4e-07 Score=57.12 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=47.5
Q ss_pred HhhhccceeeEEeecCCC-ccEEEEecCCC---Cc---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 7 VKSIFQMLSVGDFADDED-IPVYIWYDSYP---TH---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p-~p~~~w~k~~~---~~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
.+..+..+.+-|.+.+.. ...+.||+... .. ....+.+|+.+..+ ......+|.|.+++.+|+|.|
T Consensus 12 ~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~-~~~~~~sL~I~~~~~~Dsg~Y 90 (129)
T 3rrq_A 12 VVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQL-PNGRDFHMSVVRARRNDSGTY 90 (129)
T ss_dssp EEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEEC-TTSSEEEEEESSCCGGGCEEE
T ss_pred EEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEc-CCCCEEEEEECCCChhHCEEE
Confidence 345677888888887653 45678886421 10 01224567776422 234578999999999999999
Q ss_pred EEEEEE
Q psy534 74 ECKVVF 79 (145)
Q Consensus 74 ~C~~~~ 79 (145)
+|.+.+
T Consensus 91 ~C~~~~ 96 (129)
T 3rrq_A 91 LCGAIS 96 (129)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999975
No 400
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.44 E-value=5.2e-07 Score=57.36 Aligned_cols=72 Identities=22% Similarity=0.296 Sum_probs=50.2
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCCC---CcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSYP---THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
.+..+..+.+-|.+.+. +.+.+.||+... ...-....+|+....+ ......+|.|.+++.+|+|.|+|.+..
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (121)
T 2i24_N 11 TKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVN-RGSKSFSLRINDLTVKDSGTYRCKPES 87 (121)
T ss_dssp EEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEE-TTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEec-CCCCEEEEEECCCChhhCEEEEEEEec
Confidence 45678899999998765 457899998752 1110112456654321 234578999999999999999999874
No 401
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.44 E-value=3e-07 Score=62.86 Aligned_cols=66 Identities=17% Similarity=0.183 Sum_probs=47.9
Q ss_pred hhccceeeEEee-cCCCccEEEEecCCCCcccc-----cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFA-DDEDIPVYIWYDSYPTHEAE-----EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~-~g~p~p~~~w~k~~~~~~~~-----~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|-+ .|.|.|.+.|++++...... ....|.... .+++|.|.+++.+|+|.|.|.+.+.
T Consensus 121 ~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~a~N~ 192 (217)
T 2vr9_A 121 AKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIV------DGGNLLISNVEPIDEGNYKCIAQNL 192 (217)
T ss_dssp CTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEE------TTTEEEESSCCSTTCEEEEEEEEET
T ss_pred cCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEec------CCCcEEEeeCCHHHCeEEEEEEEcc
Confidence 345677888888 78899999999987532111 122344432 2568999999999999999999864
No 402
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=98.44 E-value=9.7e-07 Score=55.97 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=28.4
Q ss_pred cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 41 EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 41 ~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
.+.+|+.+.. ....+.+|.|.+++.+|+|.|+|.+.
T Consensus 59 ~~~~R~~~~~--~~~~~~sL~I~~v~~~DsG~Y~C~~~ 94 (121)
T 2oi9_C 59 DIPDGYKASR--PSQENFSLTLESATPSQTSVYFCASG 94 (121)
T ss_dssp SSCTTEEEEC--CSSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred ccCCCeEEEc--CCCCEEEEEECCCCHHHCEEEEEEEc
Confidence 4567877643 23346899999999999999999986
No 403
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.43 E-value=2.4e-07 Score=57.28 Aligned_cols=64 Identities=9% Similarity=0.063 Sum_probs=46.4
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
+...+.++.+.|...+.+ ..+.|||++... ..+|.. ......+|.|.+++.+|+|.|+|.+.+.
T Consensus 15 ~v~~G~~VtL~C~~~~~~-~~~~w~k~g~~~----~~~~~~-----~~~~~~~l~I~~v~~~dsG~Y~C~~~n~ 78 (105)
T 2vsd_A 15 GVSLGDTVTLRCHLPRMA-AWVQLWLNGTLR----FDKEKD-----KEQDAAEFSFAVTNLEDAGTYQCRYQVS 78 (105)
T ss_dssp SCCTTCEEEEEEECCSSC-EEEEEEETTEEE----EEEEEC-----TTCSEEEEEEECCSGGGCEEEEEEEEEE
T ss_pred CcCcCCCEEEEEEcCCCC-cEEEEEECCccc----eeeecc-----CCCCEEEEEECCCCHHHCeEEEEEEEcC
Confidence 345678889999887654 678899987431 112221 1234788999999999999999999864
No 404
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=98.43 E-value=3.6e-07 Score=57.62 Aligned_cols=71 Identities=18% Similarity=0.209 Sum_probs=46.5
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+.+ ...+.||+... . .....+++|+.+..+ ...++.+|.|.+++.+|
T Consensus 12 ~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~D 90 (120)
T 1n4x_H 12 KKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLD-TSTSTAFLQINNLKNED 90 (120)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred EcCCCeEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEe-CCCCEEEEEECCCCHHH
Confidence 45566677777766432 34567776531 0 011345678876532 22457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 91 sG~Y~C~~~~ 100 (120)
T 1n4x_H 91 TATYFCVRDR 100 (120)
T ss_dssp CEEEEEEEES
T ss_pred CEEEEEEEEc
Confidence 9999999973
No 405
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.43 E-value=5.8e-07 Score=60.04 Aligned_cols=67 Identities=24% Similarity=0.385 Sum_probs=48.3
Q ss_pred hccceeeEEeecCCCccEEEEecCCCC-ccc---ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPT-HEA---EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~-~~~---~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
.+..+.+.|-+.|.|.|.+.|++++.. .+. ....+++.+... ....+|.|.+++.+|+|.|.|.+.+
T Consensus 108 ~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n 178 (192)
T 2va4_A 108 ENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQ---HGSSSLHIKDVKLSDSGRYDCEAAS 178 (192)
T ss_dssp TTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEE---TTEEEEEEESCCGGGCEEEEEEEEC
T ss_pred eCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeec---cCceEEEEecCCcccCEEEEEEEEe
Confidence 366788899999999999999998421 111 112344444221 2367899999999999999999975
No 406
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.43 E-value=5.2e-07 Score=56.25 Aligned_cols=75 Identities=17% Similarity=0.124 Sum_probs=50.9
Q ss_pred hHHHhhhccceeeEEeecC-CCccEEEEecCCCCc---ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 4 SFAVKSIFQMLSVGDFADD-EDIPVYIWYDSYPTH---EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 4 ~~~~~~~~~~~~~~~w~~g-~p~p~~~w~k~~~~~---~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
|-.++..+.++-+-|-+++ .|.|.++|.|-+... +......+....+. ....-..|.|.+|..+|+|.|+|.|.+
T Consensus 22 S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~-~n~s~fiL~f~~V~~sDsG~YrCsAn~ 100 (122)
T 1xau_A 22 SKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEEN-RSVPVFVLHFKPIHLSDNGSYSCSTNF 100 (122)
T ss_dssp EEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECS-SSSCEEEEEETTCCGGGCEEEEEEEEE
T ss_pred ccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceecc-CCceeEEEEEeeEEEcCCccEEEEeeC
Confidence 4445667888889999974 689999999976421 11112222233211 112356799999999999999999975
No 407
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.42 E-value=5.8e-07 Score=56.36 Aligned_cols=71 Identities=18% Similarity=0.161 Sum_probs=46.8
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+.+ ...+.||+... + .....+++|+.+..+ ...++.+|.|.+++.+|
T Consensus 12 ~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~D 90 (117)
T 2yc1_A 12 VQPGGSLRLSCTGSGFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRD-DAKKTLSLQMNSLRAED 90 (117)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EcCCCeEEEEEEecCcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEe-CCCCEEEEEECCCCHHH
Confidence 44566677777765432 34567776431 0 111335678887543 23457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 91 sg~Y~C~~~~ 100 (117)
T 2yc1_A 91 TAVYYCARGG 100 (117)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEe
Confidence 9999999864
No 408
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.42 E-value=8.5e-07 Score=62.01 Aligned_cols=69 Identities=16% Similarity=0.129 Sum_probs=48.9
Q ss_pred hhhccceeeEEeecCCCccEEEEec--CCCCcc---------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYD--SYPTHE---------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k--~~~~~~---------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+..+.+.|-+.|.|.+.+.||| ++.... .....+|+.+.. .....+|.|.+++.+|+|.|+|.
T Consensus 147 v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 223 (247)
T 2ghw_B 147 LSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSG---SGTDFTLTISRLEPEDFAVYYCQ 223 (247)
T ss_dssp ECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEC---SSSEEEEEECSCCGGGCEEEEEE
T ss_pred ecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEec---CCCeEEEEECcCCHHHCEEEEEE
Confidence 3456778888999999888999998 332210 012345555432 23467899999999999999999
Q ss_pred EEE
Q psy534 77 VVF 79 (145)
Q Consensus 77 ~~~ 79 (145)
+.+
T Consensus 224 a~~ 226 (247)
T 2ghw_B 224 QRS 226 (247)
T ss_dssp ECS
T ss_pred Ecc
Confidence 964
No 409
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=98.42 E-value=5e-07 Score=57.71 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=46.2
Q ss_pred hhhccceeeEEeecCCCc---cEEEEecCCC---------------CcccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDEDI---PVYIWYDSYP---------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~---p~~~w~k~~~---------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+.+. ..+.||+... ......+++|+.+..+ ......+|.|.+++.+|
T Consensus 12 ~~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~~~~~D 90 (127)
T 3cx5_J 12 VQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRD-TSKNQFFLKLNSVTTED 90 (127)
T ss_dssp ECTTSCEEEEEEEESSCTTTSSEEEEEEEETTTEEEEEEEEETTSCEEECTTTTTTBCCEEE-TTTTEEEEEECSCCGGG
T ss_pred EcCCCCEEEEEEEeCcccCCCcEEEEEEECCCCCcEEEEEEeCCCCeeECcccCCcEEEEEe-CCCCEEEEEECCCCHHH
Confidence 455667777777764322 5677776431 0011234567765432 23457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 91 sg~Y~C~~~~ 100 (127)
T 3cx5_J 91 TATYYCARSE 100 (127)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEe
Confidence 9999999864
No 410
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=98.42 E-value=1.1e-06 Score=55.72 Aligned_cols=71 Identities=17% Similarity=0.182 Sum_probs=47.8
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. ....+.||+... + .....+++|+.+..+ ...+..+|.|.+++.+|
T Consensus 12 ~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~D 90 (123)
T 2wzp_D 12 VQAGGSLRLSCTASRRTGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRD-SGKNTVYLQMNSLKPED 90 (123)
T ss_dssp EETTCCEEEEEEESSCCSSSEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEE-TTEEEEEEEECSCCGGG
T ss_pred EcCCCcEEEEEEecCCCccCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEe-CCCCEEEEEECCCCHHH
Confidence 4566777777877643 245677877541 1 011235678876532 22346899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 91 sg~Y~C~~~~ 100 (123)
T 2wzp_D 91 TAIYYCAARS 100 (123)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEec
Confidence 9999999875
No 411
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=98.42 E-value=1.8e-06 Score=59.16 Aligned_cols=119 Identities=13% Similarity=0.058 Sum_probs=68.7
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+..+.+-|.+.+.....+.||+... .. + ...+.+|+.+..+ ....+.+|.|.+++.+|+|.|+|
T Consensus 12 ~v~~G~~v~L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~-~~~~~~sL~I~~~~~~Dsg~Y~C 90 (194)
T 1lp9_E 12 TLTEGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLH-KSSSSFHLQKSSAQLSDSALYYC 90 (194)
T ss_dssp EEETTSCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCB-GGGTBCCEEESSCCGGGCEEEEE
T ss_pred EEecCCCEEEEEEeCCCCCceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEec-CCCCEEEEEEcccCcccCeeEEE
Confidence 34567777888887765556678887541 10 0 1234677776422 22346899999999999999999
Q ss_pred EEEEecCCCCCCCCCcEEEEEEeEEe-cCCcEEEEcccCCCCCeeeEEEEecC
Q psy534 76 KVVFLNRSPNSHKNGTWFHLDVHGVF-NDGTELRISNIRSQDIGDYTCLATHV 127 (145)
Q Consensus 76 ~~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~ 127 (145)
.+............|....|...... ...+.+.+.... +......|.+...
T Consensus 91 ~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~~-~~~~tL~Cl~~gf 142 (194)
T 1lp9_E 91 ALFLASSSFSKLVFGQGTSLSVVPNIQNPEPAVYQLKDP-RSQDSTLCLFTDF 142 (194)
T ss_dssp EEEECSSSSCEEEECCCEEEEEECCCSSCCCEEEEEECT-TSSSCEEEEEESC
T ss_pred EEecccCCcceeeeccCceEEecCcCCCCCCeeEecCCC-CCCcEEEEEeecc
Confidence 98742100111122334455554321 122344443322 2367899999874
No 412
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.42 E-value=5.5e-07 Score=56.30 Aligned_cols=71 Identities=14% Similarity=0.187 Sum_probs=48.7
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCCCC-------cc-----------ccc-ccceEEEecCCCCCCeeeEEEcccC
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSYPT-------HE-----------AEE-YKGRISRVDKESPFGMASLNLTKIR 66 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~~~-------~~-----------~~~-~~~R~~~~~~~~~~~~~sL~I~~v~ 66 (145)
.+..+..+.+-|.+.+. +...+.||+...- .+ ..+ .++|+.+..+ ....+.+|.|.+++
T Consensus 9 ~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~ 87 (115)
T 2atp_B 9 LVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILES-SDSRRPFLSIMNVK 87 (115)
T ss_dssp EECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEES-TTSSSCEEEECSCC
T ss_pred EEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEe-CCCCEEEEEECCCC
Confidence 35567788888888754 4567888875410 00 111 2578776542 23456899999999
Q ss_pred CCCCEEEEEEEE
Q psy534 67 ESDQGWYECKVV 78 (145)
Q Consensus 67 ~~D~G~Y~C~~~ 78 (145)
.+|+|.|+|.+.
T Consensus 88 ~~DsG~Y~C~~~ 99 (115)
T 2atp_B 88 PEDSDFYFCATV 99 (115)
T ss_dssp GGGCEEEEEEEE
T ss_pred HHHCEEEEEeEc
Confidence 999999999986
No 413
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.42 E-value=8.7e-07 Score=55.70 Aligned_cols=72 Identities=15% Similarity=0.113 Sum_probs=49.9
Q ss_pred HhhhccceeeEEeecCCC-ccEEEEecCCC---Cc--c-------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 7 VKSIFQMLSVGDFADDED-IPVYIWYDSYP---TH--E-------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p-~p~~~w~k~~~---~~--~-------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
++..+..+.+-|.+.+.. ...+.||+... .. + .....+|+.+..+ ......+|.|.+++.+|+|.|
T Consensus 10 ~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~-~~~~~~~L~I~~~~~~Dsg~Y 88 (117)
T 3bp6_A 10 TVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQL-PNRHDFHMNILDTRRNDSGIY 88 (117)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEEC-TTSSEEEEEESSCCGGGCEEE
T ss_pred EEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEc-CCCCEEEEEECcCCHHHCEEE
Confidence 456678888889887543 56788987631 10 0 1123567776432 234578999999999999999
Q ss_pred EEEEEE
Q psy534 74 ECKVVF 79 (145)
Q Consensus 74 ~C~~~~ 79 (145)
+|.+..
T Consensus 89 ~C~~~~ 94 (117)
T 3bp6_A 89 LCGAIS 94 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999874
No 414
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.41 E-value=2.8e-07 Score=62.60 Aligned_cols=63 Identities=19% Similarity=0.198 Sum_probs=47.4
Q ss_pred hhccceeeEEee-cCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFA-DDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~-~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|.+ .|.|.|.+.|++++..... ...+... .+++|.|.+++.+|+|.|.|.+.+.
T Consensus 124 ~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~--~~~~~~~-------~~~~L~i~~~~~~d~G~Y~C~a~N~ 187 (212)
T 2v9r_A 124 AVGEPAVMECQPPRGHPEPTISWKKDGSPLDD--KDERITI-------RGGKLMITYTRKSDAGKYVCVGTNM 187 (212)
T ss_dssp ETTSCEEEECBCCCEESCCEEEEEETTEEECT--TSTTEEE-------ETTEEEESSCCGGGCEEEEEEEEET
T ss_pred cCCCcEEEEEecCCCCCCCEEEEEECCccCCC--CcceEEc-------cCCeEEEeeCCHhhCeeEEEEEecc
Confidence 345677888988 7899999999998754221 1223332 2568999999999999999999863
No 415
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.41 E-value=3.2e-07 Score=57.44 Aligned_cols=71 Identities=13% Similarity=0.268 Sum_probs=45.3
Q ss_pred hhhccceeeEEeecCC---CccEEEEecCCC---C--c----------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE---DIPVYIWYDSYP---T--H----------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~---p~p~~~w~k~~~---~--~----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. +...+.||+... . . ..+.+.+|+.+..+ ......+|.|.+++.+|
T Consensus 10 ~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~~~~~D 88 (116)
T 3bj9_1 10 SALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKD-VARNRGYLSISELQPED 88 (116)
T ss_dssp EETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred EcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEec-CCCceEEEEECCCChhH
Confidence 4556677777777643 345677876431 1 0 11234567766432 11235599999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 89 sG~Y~C~~~~ 98 (116)
T 3bj9_1 89 EAMYYCAMGA 98 (116)
T ss_dssp CEEEEEEECC
T ss_pred CEEEEEEEeC
Confidence 9999999863
No 416
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.41 E-value=1.9e-07 Score=63.23 Aligned_cols=67 Identities=15% Similarity=0.136 Sum_probs=47.9
Q ss_pred hhccceeeEEee-cCCCccEEEEecCCCCccccccc------ceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFA-DDEDIPVYIWYDSYPTHEAEEYK------GRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~-~g~p~p~~~w~k~~~~~~~~~~~------~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|-+ .|.|.|.+.|++++......... ++..+ .....+|.|.+++.+|+|.|.|.+.+.
T Consensus 120 ~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 193 (209)
T 1nbq_A 120 TIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVL-----NPTTGELVFDPLSASDTGEYSCEARNG 193 (209)
T ss_dssp ETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCC-----CTTTCCEEESSCCGGGCCCEEEEEECS
T ss_pred ecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEE-----cCCcceEEEEeccccCCeEEEEEEeCC
Confidence 446677888986 79999999999997542211110 11111 124688999999999999999999864
No 417
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.41 E-value=5.7e-07 Score=56.41 Aligned_cols=70 Identities=17% Similarity=0.135 Sum_probs=47.2
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---C------------cccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---T------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+-|.+.+.+ ...+.||+... + ...+.+++|+.+..+ ......+|.|.+++.+|+
T Consensus 12 ~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~Ds 90 (116)
T 1a2y_B 12 VAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKD-NSKSQVFLKMNSLHTDDT 90 (116)
T ss_dssp ECTTSCEEEEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEE-GGGTEEEEEECSCCGGGC
T ss_pred EeCCCcEEEEEEEcCCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEE-CCCCEEEEEECCCCHHHC
Confidence 45667777777776432 35677876531 1 012345678876532 224578999999999999
Q ss_pred EEEEEEEE
Q psy534 71 GWYECKVV 78 (145)
Q Consensus 71 G~Y~C~~~ 78 (145)
|.|+|.+.
T Consensus 91 g~Y~C~~~ 98 (116)
T 1a2y_B 91 ARYYCARE 98 (116)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999986
No 418
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.40 E-value=5.2e-07 Score=61.04 Aligned_cols=66 Identities=14% Similarity=0.108 Sum_probs=45.5
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
....+...|.+.|.|.|.+.|++++...... .+.. .+......+.|.|.+++.+|.|.|+|.|.+.
T Consensus 132 ~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~---~~~~--~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~ 197 (218)
T 4frw_A 132 QGLTLAASCTAEGSPAPSVTWDTEVKGTTSS---RSFK--HSRSAAVTSEFHLVPSRSMNGQPLTCVVSHP 197 (218)
T ss_dssp CCSEEEEEEEEEEBSCCEEEEEESSCCEEEE---EEEE--CSSSEEEEEEEEECCCGGGTTCEEEEEEECT
T ss_pred eccccceeeeccCCcCceEEEEECCcccccC---ceEe--cCCcEEEEEEEEEeeCCHHhCeEEEEEEEeC
Confidence 4456677788889999999999997542211 1111 1101112567999999999999999999863
No 419
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.40 E-value=6.8e-07 Score=61.53 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=51.8
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc-c-----cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH-E-----AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~-~-----~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
.+..+.++.+-|.+.+.+ +.+.||+... .. + ...+.+|+.+..+....++.+|.|.+++.+|+|.|+|.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 90 (207)
T 1ypz_E 12 SLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAA 90 (207)
T ss_dssp EEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEE
T ss_pred EEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 456778888899888654 4799998642 11 1 112567887754323355789999999999999999999
Q ss_pred EEe
Q psy534 78 VFL 80 (145)
Q Consensus 78 ~~~ 80 (145)
.+.
T Consensus 91 ~~~ 93 (207)
T 1ypz_E 91 DTW 93 (207)
T ss_dssp ECB
T ss_pred ecC
Confidence 653
No 420
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=98.40 E-value=6.4e-07 Score=56.46 Aligned_cols=71 Identities=20% Similarity=0.178 Sum_probs=46.5
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+.+ ...+.||+... + .....+++|+.+..+ ......+|.|.+++.+|
T Consensus 12 ~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~D 90 (120)
T 3b9v_A 12 VQPGGSLRLSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISAD-TSKNTAYLQMNSLRAED 90 (120)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred EeCCccEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEc-CCCCEEEEEECCCCHHH
Confidence 44566677777766432 45677776431 1 011235678876532 12456899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 91 sg~Y~C~~~~ 100 (120)
T 3b9v_A 91 TAVYYCARWG 100 (120)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEEc
Confidence 9999999874
No 421
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=98.40 E-value=5.9e-07 Score=56.75 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=47.1
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+.+ ...+.||+... . .....+++|+.+..+ ....+.+|.|.+++.+|
T Consensus 12 ~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~D 90 (121)
T 1j05_H 12 VEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITAD-TSSNTAYLQLTSLTSED 90 (121)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred EeCCCcEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEc-CCCCEEEEEECCCCHHH
Confidence 45566677777766432 35677776431 1 011335678876532 12457899999999999
Q ss_pred CEEEEEEEEEe
Q psy534 70 QGWYECKVVFL 80 (145)
Q Consensus 70 ~G~Y~C~~~~~ 80 (145)
+|.|+|.+...
T Consensus 91 sg~Y~C~~~~~ 101 (121)
T 1j05_H 91 TAVYYCAPFGY 101 (121)
T ss_dssp CEEEEEEEEBT
T ss_pred CEEEEEEEEcC
Confidence 99999999753
No 422
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.40 E-value=5e-07 Score=63.75 Aligned_cols=69 Identities=19% Similarity=0.123 Sum_probs=48.8
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC--Ccc---------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP--THE---------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~--~~~---------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+.|-+.+.|.+.+.|||+.. ... ...+.+|+.... .....+|.|.+++.+|+|.|+|.
T Consensus 150 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 226 (256)
T 3umt_A 150 ASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSR---SGSDYSLTISSLESEDFVDYYCL 226 (256)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEE---ETTEEEEEECSCCGGGCSEEEEE
T ss_pred EECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEec---CCCEEEEEECCCChhHCEEEEEE
Confidence 4467788888999998888999998531 110 112345555422 13467799999999999999999
Q ss_pred EEE
Q psy534 77 VVF 79 (145)
Q Consensus 77 ~~~ 79 (145)
+.+
T Consensus 227 ~~~ 229 (256)
T 3umt_A 227 QYA 229 (256)
T ss_dssp ECS
T ss_pred Eee
Confidence 964
No 423
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.39 E-value=3.6e-07 Score=69.88 Aligned_cols=65 Identities=23% Similarity=0.230 Sum_probs=48.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCCCcccc-cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYPTHEAE-EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~-~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
...+.++.+.|.+. |.|.+.|+++++..... ...+|+.. ..+++|.|.+++.+|+|.|+|.|.+.
T Consensus 364 v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~------~~~g~L~i~~v~~~D~G~Y~C~a~N~ 429 (452)
T 3zyi_A 364 ISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISV------LNDGTLNFSHVLLSDTGVYTCMVTNV 429 (452)
T ss_dssp CCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEE------CTTSCEECSSCCTTCCEEEEEEEECS
T ss_pred ccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEE------CCCCeEEEeecCHHHCEEEEEEEEcC
Confidence 34566777778776 99999999966543322 23346555 23688999999999999999999753
No 424
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.39 E-value=6.8e-07 Score=57.08 Aligned_cols=71 Identities=13% Similarity=0.268 Sum_probs=45.8
Q ss_pred hhhccceeeEEeecCC---CccEEEEecCCC---C--c----------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE---DIPVYIWYDSYP---T--H----------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~---p~p~~~w~k~~~---~--~----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. ....+.||+... . . ....+.+|+.+..+ ......+|.|.+++.+|
T Consensus 12 v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~-~~~~~~sL~I~~~~~~D 90 (126)
T 2h32_A 12 SALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKD-VARNRGYLSISELQPED 90 (126)
T ss_dssp EETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred ECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEe-CCCCeEEEEECCCChhH
Confidence 4456666777776643 245667776431 0 0 11234678876532 22457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 91 sG~Y~C~~~~ 100 (126)
T 2h32_A 91 EAMYYCAMGA 100 (126)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEEc
Confidence 9999999864
No 425
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=98.39 E-value=9e-07 Score=55.26 Aligned_cols=71 Identities=18% Similarity=0.246 Sum_probs=46.0
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC---C------------cccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP---T------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
+..+..+.+-|.+.+.+ ...+.||+... . ...+.+++|+.+..+ ...++.+|.|.+++.+|+
T Consensus 12 ~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~Ds 90 (114)
T 1sjv_A 12 VQAGESLKLSCAASGNTFSGGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRD-NAKKTVYLEMNSLEPEDT 90 (114)
T ss_dssp CCTTCCEEEEECCCC-----CCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTCEEEEEC-TTTCCEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEEcCccccCCeEEEEEECCCCCCEEEEEEcCCCcceeCcccCCcEEEEEe-CCCCEEEEEECCCCHHHC
Confidence 45566777777766432 34567776431 1 012335678887543 234578999999999999
Q ss_pred EEEEEEEEE
Q psy534 71 GWYECKVVF 79 (145)
Q Consensus 71 G~Y~C~~~~ 79 (145)
|.|+|.+.+
T Consensus 91 G~Y~C~~~~ 99 (114)
T 1sjv_A 91 AVYYCYTHY 99 (114)
T ss_dssp SEEEEEECC
T ss_pred EEEEEeEEc
Confidence 999999864
No 426
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=1.2e-06 Score=55.06 Aligned_cols=64 Identities=16% Similarity=-0.018 Sum_probs=43.8
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccc-------eEEEecCCCCCCeeeEEEcccCCCCCEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKG-------RISRVDKESPFGMASLNLTKIRESDQGWYECKV 77 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~-------R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 77 (145)
..+.++.+-|-..+ .|.+.|||++......+..+ |+.+..+ ....+|.|.+++.+|+|.|.|..
T Consensus 21 ~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~---g~~~~L~I~~v~~~D~G~Y~~~~ 91 (112)
T 2e6q_A 21 YDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQK---GLQHRLILHAVKHQDSGALVGFS 91 (112)
T ss_dssp ETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCB---TTEEEEEEESCCSTTCSEEEEEE
T ss_pred cCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeC---CcEEEEEECCCCHHHCccEEEEE
Confidence 45667777888877 67789999986533221112 6665321 12458999999999999997744
No 427
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.38 E-value=6.3e-07 Score=56.27 Aligned_cols=36 Identities=31% Similarity=0.384 Sum_probs=30.3
Q ss_pred cEEEEcccCCCCCeeeEEEEecCCC-----CcEEEEeCeeE
Q psy534 105 TELRISNIRSQDIGDYTCLATHVLY-----PDLLVVLGSFH 140 (145)
Q Consensus 105 ~~L~i~~v~~~d~G~Y~C~a~n~~g-----~~~~v~~~~~~ 140 (145)
..|.|.+++.+|+|.|+|.|.|..| ..+.|...++.
T Consensus 74 ~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V~~~p~i 114 (122)
T 3s35_X 74 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFV 114 (122)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEECC
T ss_pred EEEEECCCCcccCEEEEEEEccCCCceEEEEEEEEeccCeE
Confidence 3799999999999999999999998 56666665543
No 428
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.37 E-value=4e-07 Score=62.74 Aligned_cols=56 Identities=20% Similarity=0.172 Sum_probs=45.0
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+..+.+.|.+.|.|.|.+.|++++..... ....+|.|.+++.+|+|.|+|.+.+
T Consensus 131 ~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~---------------~~~~~L~i~~v~~~d~G~Y~C~a~n 186 (218)
T 3k0w_A 131 MPGSTLVLQCVAVGSPIPHYQWFKNELPLTH---------------ETKKLYMVPYVDLEHQGTYWCHVYN 186 (218)
T ss_dssp CTTCCEEEECEEEBSSCCEEEEEETTEECTT---------------CCSSEEEESSCCGGGCEEEEEEEEC
T ss_pred cCCCcEEEEEEecccCCCeEEEEECCEECCC---------------CCCCEEEEeecChhcCEEEEEEEEc
Confidence 3456788889999999999999998743110 1256899999999999999999985
No 429
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.37 E-value=5e-07 Score=59.19 Aligned_cols=69 Identities=17% Similarity=0.166 Sum_probs=49.1
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc--c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+..+.+-|.+.+.+...+.||+... .. + ...+.+|+.+.. ...+.+|.|.+++.+|+|.|+|
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~---~~~~~sL~I~~l~~~DsG~Y~C 87 (143)
T 3u6r_L 11 SLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSG---SGTDFTLTISNLEPEDFAVYYC 87 (143)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEECSCCGGGCEEEEE
T ss_pred EEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEc---cCCEEEEEEccCcccCCEEEEE
Confidence 45677888888988876666788987531 10 0 122456776532 2357899999999999999999
Q ss_pred EEE
Q psy534 76 KVV 78 (145)
Q Consensus 76 ~~~ 78 (145)
.+.
T Consensus 88 ~~~ 90 (143)
T 3u6r_L 88 QQR 90 (143)
T ss_dssp EEC
T ss_pred EEe
Confidence 985
No 430
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.37 E-value=5.3e-06 Score=57.55 Aligned_cols=121 Identities=16% Similarity=0.055 Sum_probs=70.6
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---C--cc---c---ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---T--HE---A---EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~--~~---~---~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
.+..+..+.+-|.+.+...+.+.||+... . .+ . ....+|+.+..+ ......+|.|.+++.+|+|.|+|
T Consensus 14 ~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~-~~~~~~sL~I~~~~~~Dsg~Y~C 92 (210)
T 2eys_A 14 IILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLD-ADTKQSSLHITASQLSDSASYIC 92 (210)
T ss_dssp EEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEE-TTTTEEEEEESSCCGGGCEEEEE
T ss_pred EEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEc-CCCCEEEEEEccCCcccCceEEE
Confidence 45667888888988766556788987541 1 01 0 012567776432 23457899999999999999999
Q ss_pred EEEEecCCCCCCCCCcEEEEEEeEE-ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 76 KVVFLNRSPNSHKNGTWFHLDVHGV-FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 76 ~~~~~~~~~~~~~~g~~~~l~c~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.+............|....|..... ....+.+.+.... +......|.+.....
T Consensus 93 ~~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~~-~~~~tl~Cl~~gf~P 146 (210)
T 2eys_A 93 VVSDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRDS-KSSDKSVCLFTDFDS 146 (210)
T ss_dssp EEESCSSTTCCEEECCCEEEEEECCCSSCCCEEEEECCC-SSSSCEEEEEESCCT
T ss_pred EEEccCCCcccceECCCEEEEEECCCCCCCCeEEecCCC-CCCceEEEEcccccC
Confidence 9874210001112233334444322 1122344443322 226789999987543
No 431
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.36 E-value=3.5e-07 Score=59.32 Aligned_cols=70 Identities=17% Similarity=0.169 Sum_probs=47.8
Q ss_pred HhhhccceeeEEeecCCC---ccEEEEecCCC---C--------cccccccceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 7 VKSIFQMLSVGDFADDED---IPVYIWYDSYP---T--------HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p---~p~~~w~k~~~---~--------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
++..+..+.+-|.+.+.+ .+.+.||+... + .....+.+|+.+.. ...+.+|.|.+++.+|+|.
T Consensus 16 ~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~---~~~~~sL~I~~v~~~DsG~ 92 (135)
T 1p4b_L 16 TTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL---IGDKAALTITGAQTEDEAI 92 (135)
T ss_dssp EECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEE---ETTEEEEEEESCCGGGCEE
T ss_pred EEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEc---CCCEEEEEECCCChhHCEE
Confidence 345667778888887554 56688887542 0 01123456777642 1347889999999999999
Q ss_pred EEEEEEE
Q psy534 73 YECKVVF 79 (145)
Q Consensus 73 Y~C~~~~ 79 (145)
|+|.+..
T Consensus 93 Y~C~~~~ 99 (135)
T 1p4b_L 93 YFCALWY 99 (135)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9999863
No 432
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.36 E-value=7.5e-07 Score=62.99 Aligned_cols=69 Identities=13% Similarity=0.126 Sum_probs=48.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecC--CCCcc---------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDS--YPTHE---------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~--~~~~~---------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+.|-+.|.|.+.+.|||. +.... .....+|+.... .....+|.|.+++.+|+|.|+|.
T Consensus 151 v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~ 227 (257)
T 1f3r_B 151 ASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSG---SGTDYTLTISSLQPEDVATYFCY 227 (257)
T ss_dssp CCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---EBTEEEEEECSCCGGGCSEEEEE
T ss_pred EcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEec---CCCEEEEEECCCChhhCEEEEEE
Confidence 44567788899999998889999993 32210 011234554421 12367899999999999999999
Q ss_pred EEE
Q psy534 77 VVF 79 (145)
Q Consensus 77 ~~~ 79 (145)
+.+
T Consensus 228 a~n 230 (257)
T 1f3r_B 228 QYN 230 (257)
T ss_dssp EES
T ss_pred EeC
Confidence 975
No 433
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=98.35 E-value=1.4e-06 Score=55.47 Aligned_cols=72 Identities=17% Similarity=0.252 Sum_probs=47.7
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---C------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---T------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
.+..+..+.+-|.+.+.+ ...+.||+... + .....+++|+.+..+ ......+|.|.+++.+|
T Consensus 11 ~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~-~~~~~~~L~I~~~~~~D 89 (124)
T 1yc7_A 11 SVQAGGSLRLSCAVSGSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRD-NAKNTVYLQMNSLQRED 89 (124)
T ss_dssp EECTTCCEEEEEEEESCCSSCEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EEecCCCEEEEEEEeCCCcCCCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEE-CCCCEEEEEECCCCHHH
Confidence 345566777777776432 45677776431 1 012345678877543 23457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 90 sg~Y~C~~~~ 99 (124)
T 1yc7_A 90 TGMYYCQIQC 99 (124)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEe
Confidence 9999999874
No 434
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.35 E-value=9.4e-07 Score=65.19 Aligned_cols=70 Identities=11% Similarity=0.049 Sum_probs=48.5
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecC--CCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDK--ESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~--~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+..+.+.|.+.|.|.|.+.|++++.... .....+...... +....+++|.|.+++.+|+|.|+|.|.+.
T Consensus 260 ~g~~v~l~C~~~g~P~p~i~W~~~g~~l~-~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~ 331 (347)
T 2ifg_A 260 EMHHWCIPFSVDGQPAPSLRWLFNGSVLN-ETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANP 331 (347)
T ss_dssp ESSSEEEEEEEEEESCCEEEEEETTEECC-CCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEET
T ss_pred cCceEEEEEEeeecCCCcEEEEeCCEECC-CCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecC
Confidence 35667888999999999999999875422 111111222110 11233788999999999999999999763
No 435
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.35 E-value=1.7e-06 Score=59.36 Aligned_cols=70 Identities=16% Similarity=0.125 Sum_probs=46.3
Q ss_pred hccceeeEEeecCCCccEEEEec----CCCCcccccccceEEEe--cCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYD----SYPTHEAEEYKGRISRV--DKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k----~~~~~~~~~~~~R~~~~--~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+..+.+.|.+.|.|.|.+.|++ ++.. +...-....... .........+|.|.+++.+|+|.|+|.+.+.
T Consensus 132 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 207 (231)
T 3ojm_B 132 VGGDVEFVCKVYSDAQPHIQWIKHVEKNGSK-YGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNY 207 (231)
T ss_dssp TTCCEEEECCEECSSCCEEEEEEECCBTTBS-BCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEET
T ss_pred eCCcEEEEEEEecCCCCEEEEEECCCCCCcc-ccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEec
Confidence 45677888999999999999998 4432 211111111111 1111233577999999999999999999753
No 436
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.34 E-value=1e-06 Score=62.04 Aligned_cols=69 Identities=16% Similarity=0.154 Sum_probs=48.6
Q ss_pred hhhccceeeEEeecCCCcc----EEEEecCCC---Cc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 8 KSIFQMLSVGDFADDEDIP----VYIWYDSYP---TH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p----~~~w~k~~~---~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
...+.++.+.|.+.+.+.+ .+.||++.. .. ....+.+|+.... .....+|.|.+++.+|+|.
T Consensus 145 v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~DsG~ 221 (253)
T 3uzq_A 145 VSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSG---SRTDFTLTINPVEADDVAT 221 (253)
T ss_dssp ECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEE
T ss_pred EeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeC---CCCEEEEEECCCCHHHCEE
Confidence 4567788889999988876 899998531 11 0112345555422 1336789999999999999
Q ss_pred EEEEEEE
Q psy534 73 YECKVVF 79 (145)
Q Consensus 73 Y~C~~~~ 79 (145)
|+|.+.+
T Consensus 222 Y~C~~~n 228 (253)
T 3uzq_A 222 YFCQRSN 228 (253)
T ss_dssp EEEEECS
T ss_pred EEEEEcc
Confidence 9999974
No 437
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.34 E-value=6e-07 Score=54.95 Aligned_cols=25 Identities=32% Similarity=0.278 Sum_probs=23.7
Q ss_pred cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.+|.|.+++.+|+|.|+|.|.|..|
T Consensus 63 ~~L~I~~~~~~D~G~Y~C~a~N~~G 87 (100)
T 3knb_A 63 TTLIIMDVQKQDGGLYTLSLGNEFG 87 (100)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEEEcCCCccCCEEEEEEEEECCC
Confidence 3799999999999999999999998
No 438
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.34 E-value=9.4e-07 Score=61.90 Aligned_cols=70 Identities=11% Similarity=0.106 Sum_probs=49.2
Q ss_pred hhccceeeEEeecCCC--ccEEEEecCC--CCc--c------------cccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 9 SIFQMLSVGDFADDED--IPVYIWYDSY--PTH--E------------AEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p--~p~~~w~k~~--~~~--~------------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
..+.++.+.|.+.|.+ .+.+.||++. ... + ...+.+|+.+..+ ......+|.|.+++.+|+
T Consensus 144 ~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~Ds 222 (250)
T 3esu_F 144 KPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTAD-KSSSTAYMQLSSLTSVDS 222 (250)
T ss_dssp CTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEE-GGGTEEEEEECSCCGGGC
T ss_pred cCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEec-CCCCeEEEEECCCCcccC
Confidence 4566788889998876 7899999873 211 0 1234467666422 112356899999999999
Q ss_pred EEEEEEEEE
Q psy534 71 GWYECKVVF 79 (145)
Q Consensus 71 G~Y~C~~~~ 79 (145)
|.|+|.+.+
T Consensus 223 G~Y~C~~~~ 231 (250)
T 3esu_F 223 AVYFCARSG 231 (250)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999999985
No 439
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.33 E-value=6.3e-07 Score=60.03 Aligned_cols=66 Identities=11% Similarity=0.219 Sum_probs=48.1
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCC-CCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRE-SDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~-~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|.+.|.|.|.+.|++++.. +.. ..++.+... ....+|.|.+++. +|+|.|+|.+.+.
T Consensus 116 ~~g~~~~l~C~~~~~p~p~v~W~~~~~~-~~~--~~~~~~~~~---~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 182 (197)
T 3lcy_A 116 AVGSTLRLHVMYIGRPVPAMTWFHGQKL-LQN--SENITIENT---EHYTHLVMKNVQRKTHAGKYKVQLSNV 182 (197)
T ss_dssp ETTSCEEEEEEEEEESCCEEEEEETTEE-CCC--CSSEEEEEC---SSEEEEEESSCCHHHHCEEEEEEEECS
T ss_pred cCCCeEEEEEEEeeeeCCeeEEeECCEE-CCC--CCceEEEEc---CCEEEEEEccccchhhCceEEEEEEcC
Confidence 3466788889999999999999998753 221 223333221 2348899999995 8999999999753
No 440
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.33 E-value=1.1e-06 Score=54.92 Aligned_cols=71 Identities=20% Similarity=0.202 Sum_probs=45.8
Q ss_pred hhhccceeeEEeecCC-CccEEEEecCCC---C--c---------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEE
Q psy534 8 KSIFQMLSVGDFADDE-DIPVYIWYDSYP---T--H---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGW 72 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~-p~p~~~w~k~~~---~--~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~ 72 (145)
+..+..+.+-|.+.+. +.+.+.||+... . . ....+.+|+.+..+ ...++.+|.|.+++.+|+|.
T Consensus 12 ~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~DsG~ 90 (116)
T 1tvd_A 12 VASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHI-LTQKAFHLVISPVRTEDSAT 90 (116)
T ss_dssp EETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEE-GGGTEEEEEESSCCGGGCEE
T ss_pred EecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEe-cCCCEEEEEEccCChHHCEE
Confidence 4456666677776543 445577776531 0 0 01224678776432 23457899999999999999
Q ss_pred EEEEEEE
Q psy534 73 YECKVVF 79 (145)
Q Consensus 73 Y~C~~~~ 79 (145)
|+|.+.+
T Consensus 91 Y~C~~~~ 97 (116)
T 1tvd_A 91 YYCAFTL 97 (116)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999974
No 441
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.33 E-value=1.7e-06 Score=55.81 Aligned_cols=72 Identities=15% Similarity=0.113 Sum_probs=49.7
Q ss_pred HhhhccceeeEEeecCCC-ccEEEEecCCC---Cc--c-------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 7 VKSIFQMLSVGDFADDED-IPVYIWYDSYP---TH--E-------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p-~p~~~w~k~~~---~~--~-------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
++..+..+.+-|.+.+.. ...+.||+... .. + .....+|+.+..+ ......+|.|.+++.+|+|.|
T Consensus 20 ~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~-~~~~~~~L~I~~~~~~Dsg~Y 98 (134)
T 3bik_B 20 TVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQL-PNRHDFHMNILDTRRNDSGIY 98 (134)
T ss_dssp EEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEEC-TTSSEEEEEECSCCGGGCEEE
T ss_pred EEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEec-CCCCEEEEEECCCChHHCEEE
Confidence 456778888889887543 46788987631 10 0 1123567775322 234578999999999999999
Q ss_pred EEEEEE
Q psy534 74 ECKVVF 79 (145)
Q Consensus 74 ~C~~~~ 79 (145)
+|.+..
T Consensus 99 ~C~~~~ 104 (134)
T 3bik_B 99 LCGAIS 104 (134)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999864
No 442
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.33 E-value=1.2e-06 Score=54.84 Aligned_cols=70 Identities=16% Similarity=0.135 Sum_probs=45.1
Q ss_pred HhhhccceeeEEeecCC-CccEEEEecCC--C---Cc-----------ccccc-cceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDE-DIPVYIWYDSY--P---TH-----------EAEEY-KGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~-p~p~~~w~k~~--~---~~-----------~~~~~-~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+..+..+.+-|.+.+. +...+.||+.. . .. ...++ ++|+.... ...+.+|.|.+++.+
T Consensus 11 ~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~---~~~~~~L~I~~~~~~ 87 (114)
T 2hp4_A 11 TWNLGETVELKCQVLLSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKR---LGDTFVLTLSDFRRE 87 (114)
T ss_dssp CCCTTCCEEEEEEECCSSCCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEE---ETTEEEEEESSCCGG
T ss_pred EEcCCCCEEEEEEeecCCCCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEe---cCCEEEEEECCCCHH
Confidence 45567777788877633 34567787642 1 10 01122 45665432 134678999999999
Q ss_pred CCEEEEEEEEE
Q psy534 69 DQGWYECKVVF 79 (145)
Q Consensus 69 D~G~Y~C~~~~ 79 (145)
|+|.|+|.+..
T Consensus 88 Dsg~Y~C~~~~ 98 (114)
T 2hp4_A 88 NEGYYFCSALS 98 (114)
T ss_dssp GCEEEEEEEEE
T ss_pred HCEEEEEEEec
Confidence 99999999864
No 443
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=98.32 E-value=1e-05 Score=55.83 Aligned_cols=116 Identities=17% Similarity=0.137 Sum_probs=66.5
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC---Cc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
+..+..+.+-|.+.+.....+.||+... .. ....+.+|+.+..+ ......+|.|.+++.+|+|.|+|.
T Consensus 12 v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~-~~~~~~sL~I~~l~~~DsG~Y~Ca 90 (200)
T 3rgv_A 12 LSENDFLFINCTYSTTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYD-KGTTSFHLQKTSVQEIDSAVYYCA 90 (200)
T ss_dssp EETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECB-TTTTBCCEEESSCCSTTCEEEEEE
T ss_pred EeCCCCEEEEEEecCCCCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEEC-CCCCEEEEEEcCCcCccCCCEEEE
Confidence 3455666666666543334566776421 10 01235678876432 334578999999999999999999
Q ss_pred EEEecCCCCCCCCCcEEEEEEeEE-ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 77 VVFLNRSPNSHKNGTWFHLDVHGV-FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 77 ~~~~~~~~~~~~~g~~~~l~c~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+... .....|....|..... ....+.+.+..-. +....+.|.+..-..
T Consensus 91 ~~~~----~~~~fG~GT~L~V~~~~~~~~P~V~~~~~~-~~~~tl~Cl~~gf~P 139 (200)
T 3rgv_A 91 ANSG----TYQRFGTGTKLQVVPNIQNPDPAVYQLRDS-KSSDKSVCLFTDFDS 139 (200)
T ss_dssp EESS----SCCCCCCCEEEEEECCCSSCCCEEEEEEES-SSSSCEEEEEESCCT
T ss_pred eccC----cccccCcCEEEEEeCCCCCCCCeEEEccCC-CCCceEEEEcccccC
Confidence 8521 1223344445554432 1122344333222 244789999988654
No 444
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.32 E-value=1.1e-06 Score=62.91 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=49.2
Q ss_pred hhccceeeEEeecCCC--ccEEEEecCCC--Cc--c------------cccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 9 SIFQMLSVGDFADDED--IPVYIWYDSYP--TH--E------------AEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p--~p~~~w~k~~~--~~--~------------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
..+.++.+.|.+.|.+ .+.+.||++.. .. + .....+|+.+..+ ......+|.|.+++.+|+
T Consensus 147 ~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~Ds 225 (276)
T 3auv_A 147 QPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISAD-TSKNTAYLQMNSLRAEDT 225 (276)
T ss_dssp CTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEE-GGGTEEEEEECSCCGGGC
T ss_pred cCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEec-CCCcEEEEEECCCChhHC
Confidence 4566788889998876 58999999641 10 0 1123456665321 112356899999999999
Q ss_pred EEEEEEEEEe
Q psy534 71 GWYECKVVFL 80 (145)
Q Consensus 71 G~Y~C~~~~~ 80 (145)
|.|+|.+.+.
T Consensus 226 G~Y~C~a~n~ 235 (276)
T 3auv_A 226 AVYYCARFVF 235 (276)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEEEcC
Confidence 9999999864
No 445
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.32 E-value=5.7e-07 Score=55.83 Aligned_cols=25 Identities=24% Similarity=0.336 Sum_probs=23.6
Q ss_pred cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.+++.+|+|.|+|.|.|..|
T Consensus 69 ~~L~I~~v~~~D~G~Y~C~a~N~~G 93 (107)
T 3knb_B 69 HGLLLTAALPTDAGVYVCRARNAAG 93 (107)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEEEecCChhhCEEEEEEEEECCC
Confidence 3799999999999999999999998
No 446
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.31 E-value=1.5e-06 Score=57.80 Aligned_cols=57 Identities=9% Similarity=0.098 Sum_probs=44.0
Q ss_pred hhccceeeEEeecCCC-ccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDED-IPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p-~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+.++.+.|-+.+.+ .+.+.|++++... ... .....|.|.+++.+|+|.|.|.+.+
T Consensus 101 ~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~---------~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n 158 (175)
T 1fnl_A 101 KEEDPIHLRCHSWKNTALHKVTYLQNGKDR---------KYF-----HHNSDFHIPKATLKDSGSYFCRGLV 158 (175)
T ss_dssp ETTCCEEEEEEECTTCCCEEEEEEETTEEE---------EEE-----EECCCEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCCEEEEEEcCCCCCceEEEEEECCeEc---------cCC-----CCCCEEEEcccChhhCeEEEEEEEc
Confidence 3567788889888765 4599999987531 110 1268899999999999999999986
No 447
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.31 E-value=1.6e-06 Score=60.18 Aligned_cols=62 Identities=10% Similarity=-0.032 Sum_probs=45.5
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|-..+.|.+.+.|+|++.... . .+ .. ....+.|.|.+++.+|+|.|+|.+.+.
T Consensus 118 ~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~-~---~~-~~-----~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 179 (218)
T 1uct_A 118 MPGENISLTCSSAHIPFDRFSLAKEGELSL-P---QH-QS-----GEHPANFSLGPVDLNVSGIYRCYGWYN 179 (218)
T ss_dssp CTTCCCEEEEECSSSCCSEEEEEETTCSSC-C---SE-EE-----CSSSEEEECCSCCGGGCEEEEEEEECT
T ss_pred CCCCCEEEEEeCCCCCCCEEEEEECCCccc-c---cc-cC-----CCccCEEEEccCCcccCEEEEEEEEcC
Confidence 355677888865667788999999985421 1 11 11 134788999999999999999999853
No 448
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.31 E-value=1.6e-06 Score=59.54 Aligned_cols=72 Identities=19% Similarity=0.223 Sum_probs=45.3
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCCCcccccc-cceEEEecC-CCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYPTHEAEEY-KGRISRVDK-ESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~~~~~~~~-~~R~~~~~~-~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|.+.|.| .+.+.|++++........ ..+...... .......+|.|.+++.+|+|.|+|.+.+
T Consensus 117 v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 192 (213)
T 2x1w_L 117 LSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 192 (213)
T ss_dssp EETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEEC
T ss_pred EcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEec
Confidence 34677888999999754 457999998754211101 001100000 0011256799999999999999999975
No 449
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.31 E-value=1.2e-06 Score=60.83 Aligned_cols=71 Identities=15% Similarity=0.174 Sum_probs=48.4
Q ss_pred hhhccceeeEEeecCCCc--cEEEEecCC--CCc--------------ccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDEDI--PVYIWYDSY--PTH--------------EAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~--p~~~w~k~~--~~~--------------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+.|.+.|.|. +.+.||++. ... ....+.+|+.+..+ ......+|.|.+++.+|
T Consensus 131 v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D 209 (240)
T 1moe_A 131 VEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITAD-TSSNTAYLQLTSLTSED 209 (240)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEc-ccCCEEEEEECcCCHHH
Confidence 345677888899998874 589999963 111 01123456655321 12346789999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+..
T Consensus 210 ~G~Y~C~a~~ 219 (240)
T 1moe_A 210 TAVYYCAPFG 219 (240)
T ss_dssp CEEEEEEECS
T ss_pred CEEEEEEEEe
Confidence 9999999973
No 450
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=98.31 E-value=4.8e-07 Score=56.66 Aligned_cols=71 Identities=17% Similarity=0.269 Sum_probs=42.6
Q ss_pred HhhhccceeeEEeec--CCCccEEEEecCC-C----Cc---------ccccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 7 VKSIFQMLSVGDFAD--DEDIPVYIWYDSY-P----TH---------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~--g~p~p~~~w~k~~-~----~~---------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
.+..+..+.+-|.+. +.....+.||+.. . .. ......+|+.+..+ ...++.+|.|.+++.+|+
T Consensus 7 ~~~~G~~vtL~C~~~~~~~~~~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~-~~~~~~sL~I~~v~~~Ds 85 (116)
T 3bia_X 7 IGFLGQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGK-VQFGEVSLTISNTNRGDS 85 (116)
T ss_dssp EEETTSCEEECCBCTTCCTTTCEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSC-GGGTBCCEEECSCCGGGC
T ss_pred EEeeCCcEEEEEEeeCCCCCeEEEEEeeecCCCCCCceEEEEECCcccccccCceEEEecc-CCCCEEEEEEccCChhHC
Confidence 344555666666654 2223346666554 1 00 01122346655332 345578999999999999
Q ss_pred EEEEEEEE
Q psy534 71 GWYECKVV 78 (145)
Q Consensus 71 G~Y~C~~~ 78 (145)
|.|+|.+.
T Consensus 86 g~Y~C~v~ 93 (116)
T 3bia_X 86 GVYCCRIE 93 (116)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999986
No 451
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.31 E-value=1.5e-06 Score=55.44 Aligned_cols=71 Identities=20% Similarity=0.236 Sum_probs=46.7
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCCC---C------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSYP---T------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
.+..+..+.+-|.+.+. ....+.||+... . .....+++|+.+..+ ....+.+|.|.+++.+|
T Consensus 11 ~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~-~~~~~~sL~I~~~~~~D 89 (127)
T 1kxt_B 11 SVQAGGSLRLSCAASGYTFSSYPMGWYRQAPGKECELSARIFSDGSANYADSVKGRFTISRD-NAANTAYLQMDSLKPED 89 (127)
T ss_dssp ECCTTCCEEEEEEEC--CCSSSCEEEEEECTTSCEEEEEEECTTSCEEECTTTTTTEEEEEC-SSSSEEEEEECSCCGGG
T ss_pred EEeCCCCEEEEeEecCCCccceEEEEEEECCCCCcEEEEEEecCCCeeeCcccCCeEEEEEe-CCCCEEEEEECcCCHHH
Confidence 34566677777777642 234577776431 0 112345678887543 33457899999999999
Q ss_pred CEEEEEEEE
Q psy534 70 QGWYECKVV 78 (145)
Q Consensus 70 ~G~Y~C~~~ 78 (145)
+|.|.|.+.
T Consensus 90 sg~Y~C~~~ 98 (127)
T 1kxt_B 90 TAVYYCAAG 98 (127)
T ss_dssp CEEEEEEEC
T ss_pred CEEEEEEEE
Confidence 999999886
No 452
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.31 E-value=1.1e-06 Score=55.40 Aligned_cols=37 Identities=24% Similarity=0.535 Sum_probs=29.9
Q ss_pred cccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 41 EYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 41 ~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
.+.+|+.+..+ ...+..+|.|.+++.+|+|.|+|.+.
T Consensus 59 ~~~~R~~~~~~-~~~~~~sL~I~~l~~~DsG~Y~C~v~ 95 (117)
T 1xed_A 59 KYAGRANLTNF-PENGTFVVNIAQLSQDDSGRYKCGLG 95 (117)
T ss_dssp TTTTTEEEEEE-TTTTEEEEEECSCCGGGCEEEEEEES
T ss_pred eEcCCEEEEec-CCCCEEEEEECCCChHHCEEEEEEEE
Confidence 46778876543 44568899999999999999999885
No 453
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1; 1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Probab=98.31 E-value=1.4e-06 Score=55.58 Aligned_cols=72 Identities=18% Similarity=0.284 Sum_probs=46.9
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---C------------------cccccccceEEEecCCCCCCeeeEEEc
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---T------------------HEAEEYKGRISRVDKESPFGMASLNLT 63 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~------------------~~~~~~~~R~~~~~~~~~~~~~sL~I~ 63 (145)
.+..+..+.+-|.+.+.+ ...+.||+... + .....+++|+.+..+ ......+|.|.
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Rf~~~~~-~~~~~~~L~I~ 89 (127)
T 1i3u_A 11 LVQAGDSLKLSCEASGDSIGTYVIGWFRQAPGKERIYLATIGRNLVGPSDFYTRYADSVKGRFAVSRD-NAKNTVNLQMN 89 (127)
T ss_dssp ECCTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEEEEESSSSCEEEEECTTTBTTEEEEEE-GGGTEEEEEEC
T ss_pred EEeCCCcEEEEEEecCCCcCCcEEEEEEECCCCCcEEEEEEEeccccCCCcceeeCcccCCeEEEEEc-CCCCEEEEEEC
Confidence 345566777777766432 45677776431 1 011235678876532 12347899999
Q ss_pred ccCCCCCEEEEEEEEE
Q psy534 64 KIRESDQGWYECKVVF 79 (145)
Q Consensus 64 ~v~~~D~G~Y~C~~~~ 79 (145)
+++.+|+|.|.|.+..
T Consensus 90 ~~~~~Dsg~Y~C~~~~ 105 (127)
T 1i3u_A 90 SLKPEDTAVYYCAAKT 105 (127)
T ss_dssp SCCGGGCEEEEEEEES
T ss_pred CCChhhCEEEEEEEEc
Confidence 9999999999999874
No 454
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.31 E-value=2.3e-06 Score=59.24 Aligned_cols=70 Identities=16% Similarity=0.151 Sum_probs=47.0
Q ss_pred hhccceeeEEeecCCCccEEEEec----CCCCcccccccceEEEe---cCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYD----SYPTHEAEEYKGRISRV---DKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k----~~~~~~~~~~~~R~~~~---~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+.++.+.|.+.|.|.|.+.|++ ++... ...-..+.... .........+|.|.+++.+|+|.|+|.+.+
T Consensus 127 ~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N 203 (241)
T 3grw_A 127 VLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKV-GPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATN 203 (241)
T ss_dssp CTTCCEEEEEEEECSSCCEEEEEEECCSSSCSS-CTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cCCCEEEEEEEEecCCCCEEEEEEcccCCCccc-CCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEec
Confidence 346678889999999999999999 55332 11111111110 001112367899999999999999999975
No 455
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.30 E-value=1.4e-06 Score=57.99 Aligned_cols=57 Identities=18% Similarity=0.106 Sum_probs=45.2
Q ss_pred hhccceeeEEeec-CCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFAD-DEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~-g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+.++.+.|.+. +.|.+.+.|++++... . . ...+..|.|.+++.+|+|.|.|.+.+
T Consensus 98 ~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~-~--------~-----~~~~~~L~i~~v~~~d~G~Y~C~a~n 155 (176)
T 1f2q_A 98 MEGQPLFLRCHGWRNWDVYKVIYYKDGEAL-K--------Y-----WYENHNISITNATVEDSGTYYCTGKV 155 (176)
T ss_dssp ETTSCEEEEEEEGGGCCEEEEEEEETTEEC-C--------S-----CCCSSEEEESSCCGGGCEEEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCceEEEEEECCEEE-e--------e-----ecCCCeEEECCCCcccCEEEEEEEEe
Confidence 3567788899995 7788899999987431 1 0 12367899999999999999999986
No 456
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB: 2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A 1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Probab=98.30 E-value=1.2e-06 Score=55.89 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=43.8
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. ....+.||+... + .....+++|+.+..+ ....+.+|.|.+++.+|
T Consensus 12 v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~~~~~D 90 (127)
T 2x1q_A 12 VQPGGSLRLSCAASGRTFSNYRMGWFRQAPGKEREFVATISQSGAATAYADSVKGRFTFSRD-NAKNLLYLEMLSLEPED 90 (127)
T ss_dssp ECTTCCEEEEEC------CCSEEEEEEECTTSCCEEEEEECTTSSCEEECTTTTTTEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred EcCCCCEEEEEEeCCcccCCcEEEEEEECCCCCCEEEEEEecCCCceeeCcccCCcEEEEEe-CCCCEEEEEEcCCCHHH
Confidence 4456666666766532 234566766431 1 011335678876532 12457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|.|.+..
T Consensus 91 sg~Y~C~~~~ 100 (127)
T 2x1q_A 91 TAVYYCAASS 100 (127)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEEe
Confidence 9999999874
No 457
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.29 E-value=3.4e-06 Score=56.62 Aligned_cols=62 Identities=11% Similarity=0.028 Sum_probs=45.0
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~ 81 (145)
..+.++.+.|.+.+.| +.+.|+|++.... ... +.. .....|.|.+++.+|+|.|.|.+.+..
T Consensus 106 ~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~-~~~--~~~-------~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 167 (184)
T 2gi7_A 106 SSGGDVTLQCQTRYGF-DQFALYKEGDPAP-YKN--PER-------WYRASFPIITVTAAHSGTYRCYSFSSR 167 (184)
T ss_dssp CCTTCEEEEEECSSCC-CEEEEEECCCCTT-SCC--CCE-------EEEESSSEEEETTCCSEEEEEEEECTT
T ss_pred cCCCcEEEEEEcCCCC-cEEEEEECCCcCc-cee--cCC-------CceEEEEEccCCccCCeEEEEEEEeCC
Confidence 3566788889887665 6899999985422 111 111 227789999999999999999998753
No 458
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=98.29 E-value=1.5e-06 Score=53.69 Aligned_cols=67 Identities=13% Similarity=0.248 Sum_probs=52.0
Q ss_pred HhhhccceeeEEeec---CCCc--cEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 7 VKSIFQMLSVGDFAD---DEDI--PVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~---g~p~--p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
|.++.+....+.|.. +... -++.|..+........|++|+.+. ..+++|.|.+++++|+|.|.-++.
T Consensus 24 ps~l~tk~~sv~Wk~~~~t~~q~~kIl~W~~~~~~~~~~~fk~r~~fd-----~~n~AL~I~~vQ~eDSg~Y~LeVt 95 (112)
T 2ptt_B 24 PSNIQTKDVSVQWKKTEQGSHRKIEILNWYNDGPSWSNVSFSDIYGFD-----YGDFALSIKSAKLQDSGHYLLEIT 95 (112)
T ss_dssp CSSCCCTTCEEEEEEECTTSSCEEEEEEESSSSCCBSSGGGGGTEEEC-----TTTCCEEESSCCGGGCEEEEEEEE
T ss_pred cCCCCCCceeEEEEeecCCCCcceEEEEEeCCCccccceeeCCEEEEe-----cCCcEEEEEecCcccCceEEEEEe
Confidence 345667778899998 6656 678885554333446689999984 459999999999999999999885
No 459
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.29 E-value=3.1e-06 Score=56.89 Aligned_cols=59 Identities=10% Similarity=0.105 Sum_probs=44.8
Q ss_pred hhccceeeEEeecCCCcc-EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFADDEDIP-VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p-~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+.++.+.|-+.|.|.| .+.|++++........ ...+.+|.|.+++ |+|.|.|.+.+.
T Consensus 119 ~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-----------~~~~~~L~i~~~~--d~G~Y~C~a~N~ 178 (195)
T 2c5d_C 119 AANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPG-----------HGPQRSLHVPGLN--KTSSFSCEAHNA 178 (195)
T ss_dssp CTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTT-----------SSCCEEEEECCCS--SCEEEEEEEEET
T ss_pred cCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCC-----------cCCCCeEEEcccc--cCceEEEEEEcC
Confidence 346678889999999999 9999999854221110 0247889999997 899999999863
No 460
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=98.29 E-value=9.6e-06 Score=56.33 Aligned_cols=121 Identities=17% Similarity=0.158 Sum_probs=68.4
Q ss_pred HhhhccceeeEEeecCCCccEEEEecCCC---Cc-c------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDSYP---TH-E------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~-~------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
.+..+..+.+-|.+.+.....+.||+... .. + .....+|+.+..+ ......+|.|.+++.+|+|.|+|.
T Consensus 13 ~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~-~~~~~~sL~I~~lq~~DsG~Y~Ca 91 (208)
T 4ei6_A 13 SVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLN-KASLHVSLHIRDSQPSDSALYFCA 91 (208)
T ss_dssp EEETTCCEECEEEECCTTEEEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEB-TTTTBC-CEECSCCGGGCEEEEEE
T ss_pred EEECCCCEEEEEEEcCCCCceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEc-CCCCEEEEEEEeCcccCCCcEEEE
Confidence 34567777888887765556778887531 10 0 0114677776422 334578999999999999999999
Q ss_pred EEEecCCCCCCCCCcEEEEEEeEEe-cCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 77 VVFLNRSPNSHKNGTWFHLDVHGVF-NDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 77 ~~~~~~~~~~~~~g~~~~l~c~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+............|....|...... ...+.+.+..-. +..+.+.|.+.+-..
T Consensus 92 ~~~~~~~~~~~~fG~GT~L~V~~~~~~~~PsVf~l~~~-~~~~tl~Cl~~~f~P 144 (208)
T 4ei6_A 92 ASEQNNYAQGLTFGLGTRVSVFPYIQNPDPAVYQLRDS-KSSDKSVCLFTDFDS 144 (208)
T ss_dssp EEECCSSCCCCEECCCEEEEEECCCSSCCCEEEEEEBS-SCTTCEEEEEESCCT
T ss_pred EecCCCccccccCCCCEEEEEeCcccCCCCEEEEcccC-CCCceEEEEeeccCC
Confidence 8631100001223444455444321 122344333222 234689999988654
No 461
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=98.29 E-value=7.5e-07 Score=57.73 Aligned_cols=34 Identities=32% Similarity=0.290 Sum_probs=27.6
Q ss_pred cceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 43 KGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 43 ~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
.+|+.+.. ..++.+|.|.+++.+|+|.|+|.+..
T Consensus 64 ~~Rf~~~~---~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 97 (137)
T 3bdb_A 64 DSRFSMTV---NDQKFDLNIIGAREDDGGEYFCGEVE 97 (137)
T ss_dssp CTTEEEEE---SSSBEEEEEESCCSTTCEEEEEEEEC
T ss_pred CCcEEEEe---cCCEEEEEECCCCHHHCEEEEEEEcc
Confidence 57877643 24578999999999999999999863
No 462
>3nn8_A Engineered SCFV, heavy chain; beta barrel, antibody fragment, immunoglobulin, immune syste; 3.10A {Mus musculus}
Probab=98.29 E-value=1.2e-06 Score=55.56 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=30.7
Q ss_pred ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 40 EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 40 ~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+++|+.+..+ ....+.+|.|.+++.+|+|.|+|.+..
T Consensus 63 ~~~~~Rf~~~~~-~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 101 (122)
T 3nn8_A 63 PSLKSRATLTVD-KTSSTVYLELRSLTSEDSSVYYCARRG 101 (122)
T ss_dssp GGGTTCEEEEEE-TTTTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ccccCCEEEEEe-CCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 456788887532 234578999999999999999999863
No 463
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.28 E-value=2.7e-06 Score=54.16 Aligned_cols=70 Identities=16% Similarity=0.087 Sum_probs=44.7
Q ss_pred hhccceeeEEeecCCC-ccEEEEecCCCC-----c------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 9 SIFQMLSVGDFADDED-IPVYIWYDSYPT-----H------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p-~p~~~w~k~~~~-----~------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
..+..+.+-|.+.+.. ...+.||+...- . ....+.+|+.+..+ ...+..+|.|.+++.+|+|.|+|.
T Consensus 15 ~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~-~~~~~~sL~I~~l~~~Dsg~Y~C~ 93 (124)
T 2nms_A 15 LERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDN-QKNRTFTVTMEDLMKTDADTYWCG 93 (124)
T ss_dssp ETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEE-TTTTEEEEEECSCCGGGCEEEEEE
T ss_pred eCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEc-CcCCEEEEEEeCCCHHHCEEEEEE
Confidence 4555666666655332 224666665320 0 11336788876432 345678999999999999999999
Q ss_pred EEE
Q psy534 77 VVF 79 (145)
Q Consensus 77 ~~~ 79 (145)
+..
T Consensus 94 ~~~ 96 (124)
T 2nms_A 94 IEK 96 (124)
T ss_dssp EEE
T ss_pred EEc
Confidence 863
No 464
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.28 E-value=1.9e-06 Score=58.07 Aligned_cols=62 Identities=11% Similarity=0.075 Sum_probs=44.9
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEec
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFLN 81 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~ 81 (145)
..+..+.+.|.+.+. .+.+.|+|++.... . +... ...+..|.|.+++.+|+|.|+|.+.+..
T Consensus 111 ~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~-~----~~~~-----~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 111 ISGEKVTFYCRLDTA-TSMFLLLKEGRSSH-V----QRGY-----GKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp ETTCEEEEEEECSSS-CSEEEEEEESSSCE-E----EEEE-----CSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred ccCCEEEEEEEcCCC-CCEEEEEECCcccc-c----cccC-----CCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 456677888987764 46899999985421 1 1111 1347899999999999999999998653
No 465
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.28 E-value=1.4e-06 Score=61.48 Aligned_cols=69 Identities=17% Similarity=0.132 Sum_probs=47.6
Q ss_pred hhhccceeeEEeecCCCc-cEEEEecCC---CCcc--------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDI-PVYIWYDSY---PTHE--------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~-p~~~w~k~~---~~~~--------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
...+.++.+.|-+.+.+. +.+.||+.. .... ...+.+|+..... ....+|.|.+++.+|+|.|+|
T Consensus 161 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~L~I~~v~~~DsG~Y~C 237 (256)
T 3juy_B 161 LSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGS---GTDFTLTITRVEPEDFALYYC 237 (256)
T ss_dssp ECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE---TTEEEEEESSCCGGGCSEEEE
T ss_pred EeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEcc---CCEEEEEECCCCHhHCEEEEE
Confidence 345677888899988776 899999842 1110 0113455554321 236779999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 238 ~~~~ 241 (256)
T 3juy_B 238 QVYG 241 (256)
T ss_dssp EECC
T ss_pred EEee
Confidence 9964
No 466
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.27 E-value=2.3e-06 Score=60.54 Aligned_cols=69 Identities=16% Similarity=0.142 Sum_probs=47.5
Q ss_pred hhhccceeeEEeecCCCcc-----EEEEecC--CCCcc---------cccccceEEEecCCCCCCeeeEEEcccCCCCCE
Q psy534 8 KSIFQMLSVGDFADDEDIP-----VYIWYDS--YPTHE---------AEEYKGRISRVDKESPFGMASLNLTKIRESDQG 71 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p-----~~~w~k~--~~~~~---------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G 71 (145)
...+.++.+.|-+.|.|.+ .+.|||. +.... .....+|+.... .....+|.|.+++.+|+|
T Consensus 133 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~DsG 209 (256)
T 1nqb_A 133 VSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG---SGTDFTLKISRVEAEDLG 209 (256)
T ss_dssp ECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCE
T ss_pred EecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEc---cCCEEEEEECCCChHHCE
Confidence 4566788889999988765 8999993 32210 011234554321 124678999999999999
Q ss_pred EEEEEEEE
Q psy534 72 WYECKVVF 79 (145)
Q Consensus 72 ~Y~C~~~~ 79 (145)
.|+|.+.+
T Consensus 210 ~Y~C~a~~ 217 (256)
T 1nqb_A 210 VYYCFQGS 217 (256)
T ss_dssp EEEEEECS
T ss_pred EEEEEEcc
Confidence 99999964
No 467
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.27 E-value=2.4e-06 Score=56.19 Aligned_cols=57 Identities=9% Similarity=0.072 Sum_probs=44.2
Q ss_pred hccceeeEEeec-CCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFAD-DEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~-g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+.++.+.|.+. +.|.+.+.|++++... ... ..+..|.|.+++.+|+|.|.|.+.+.
T Consensus 99 ~g~~~~l~C~~~~~~p~~~~~W~~~g~~~---------~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~ 156 (170)
T 3ry4_A 99 EGETIMLRCHSWKDKPLVKVTFFQNGKSQ---------KFS-----HLDPTFSIPQANHSHSGDYHCTGNIG 156 (170)
T ss_dssp TTCCEEEEEEEGGGCCEEEEEEEETTEEE---------EEE-----SSCCEEEESSCCGGGCEEEEEEEEET
T ss_pred cCCeEEEEEECCCCCCCceEEEEECCeEc---------ccc-----CCCCeEEEEeccccCCEEEEEEEEeC
Confidence 456788889985 6788999999987431 111 23678999999999999999999763
No 468
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.27 E-value=1.9e-06 Score=54.84 Aligned_cols=70 Identities=19% Similarity=0.225 Sum_probs=46.9
Q ss_pred HhhhccceeeEEeecCCC--ccEEEEecCCC---Cc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 7 VKSIFQMLSVGDFADDED--IPVYIWYDSYP---TH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p--~p~~~w~k~~~---~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
.+..+..+.+-|.+.+.+ ...+.||+... .. ....+.+|+.+.. ...+.+|.|.+++.+|+|.|
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~---~~~~~sL~I~~l~~~DsG~Y 87 (123)
T 3t0v_A 11 SGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSK---SGTSASLAISGLRSEDEADY 87 (123)
T ss_dssp EECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEECSCCGGGCEEE
T ss_pred EEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEc---cCCEEEEEECCCCHHHCEEE
Confidence 345677778888877543 35677887531 10 0122456776532 24578999999999999999
Q ss_pred EEEEEE
Q psy534 74 ECKVVF 79 (145)
Q Consensus 74 ~C~~~~ 79 (145)
+|.+..
T Consensus 88 ~C~~~~ 93 (123)
T 3t0v_A 88 YCLSWD 93 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999864
No 469
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.26 E-value=2.1e-06 Score=58.83 Aligned_cols=69 Identities=10% Similarity=0.032 Sum_probs=45.6
Q ss_pred hhccceeeEEee-cCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 9 SIFQMLSVGDFA-DDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 9 ~~~~~~~~~~w~-~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
..+..+.+.|-+ .|.|.|.+.|++++...+.......... .. ...-..|.|.+++.+|+|.|.|.+.+.
T Consensus 123 ~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~-~~--~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 192 (222)
T 4i0k_A 123 RPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMA-NE--RGLFDVHSVLRVVLGANGTYSCLVRNP 192 (222)
T ss_dssp -CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEE-CT--TSCEEEEEEEEEECCTTCEEEEEEEET
T ss_pred cCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEc-CC--CCeEEEEEEEEEEeCCCCEEEEEEECC
Confidence 456788899999 6889999999996544332221111111 10 111234789999999999999999764
No 470
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=98.26 E-value=2.2e-06 Score=54.54 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=44.4
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC--------------CcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP--------------THEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~--------------~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
+..+..+.+-|.+.......+.||+... ......+.+|+.+..+ .....+|.|.+++.+|+|.|
T Consensus 17 v~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~--~~~~~sL~I~~~~~~Dsg~Y 94 (125)
T 3r8b_B 17 AVTGEKVTLSCKQTNSYFNNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRP--SQENFSLILELATPSQTSVY 94 (125)
T ss_dssp EETTCCEEEEEEEESCCCSEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEE--ETTEEEEEETTCCGGGCEEE
T ss_pred EcCCCcEEEEEEECCCCCCeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEec--CCCEEEEEECCCChhhCEEE
Confidence 3455666666666544334566765421 1111235567765422 14578999999999999999
Q ss_pred EEEEEE
Q psy534 74 ECKVVF 79 (145)
Q Consensus 74 ~C~~~~ 79 (145)
+|.+..
T Consensus 95 ~C~~~~ 100 (125)
T 3r8b_B 95 FCASGG 100 (125)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 999863
No 471
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=1.5e-06 Score=52.57 Aligned_cols=26 Identities=42% Similarity=0.629 Sum_probs=24.2
Q ss_pred CcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 104 GTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 104 ~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+..|.|.+++.+|+|.|+|.|.|..|
T Consensus 61 ~~~L~i~~v~~~d~G~Y~C~a~n~~g 86 (100)
T 2edj_A 61 QGTLQIKNLRISDTGTYTCVATSSSG 86 (100)
T ss_dssp TCCEEEESCCTTTCCEEEEEEECSSC
T ss_pred CCEEEEccCCcccCEEEEEEEEcCCC
Confidence 34899999999999999999999998
No 472
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.26 E-value=1.8e-06 Score=60.43 Aligned_cols=71 Identities=18% Similarity=0.218 Sum_probs=49.0
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC-Ccc---------------cccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP-THE---------------AEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~~~---------------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+.|.+.+.+ .+.+.||++.. ... ...+.+|+.+..+ ......+|.|.+++.+|
T Consensus 139 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D 217 (247)
T 1svz_A 139 KKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLD-TSTSTAFLQINNLKNED 217 (247)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEE-GGGTEEEEEECSCCGGG
T ss_pred ecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEe-cCCCEEEEEECCCChhH
Confidence 44566788889998874 56899998641 100 1123566665321 12336799999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 218 sG~Y~C~a~n 227 (247)
T 1svz_A 218 TATYFCVRDR 227 (247)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEec
Confidence 9999999986
No 473
>2ol3_A BM3.3 T-cell receptor alpha-chain; T cell receptor, class I MHC, H-2KBM8, TCR-PMHC complex, IMM system; HET: NAG; 2.90A {Mus musculus} SCOP: b.1.1.1
Probab=98.26 E-value=1.7e-06 Score=56.52 Aligned_cols=72 Identities=15% Similarity=0.152 Sum_probs=45.5
Q ss_pred HhhhccceeeEEeecCCC-ccEEEEecCCC---C--c-------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEE
Q psy534 7 VKSIFQMLSVGDFADDED-IPVYIWYDSYP---T--H-------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWY 73 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p-~p~~~w~k~~~---~--~-------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 73 (145)
.+..+..+.+-|.+.+.. ...+.||+... . . ......+|+.+..+ ......+|.|.+++.+|+|.|
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rfs~~~~-~~~~~~sL~I~~~~~~Dsg~Y 89 (142)
T 2ol3_A 11 SVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQ-KPKSSIGLIITATQIEDSAVY 89 (142)
T ss_dssp EEETTCCEEECCBCCCCCSSCEEEEEEECTTCCEEEEEEEETTCSSCCEETTEEECCB-GGGTBCCEEECSCCTTTCEEE
T ss_pred EEecCCCEEEEEEecCCcCCceEEEEEeCCCCCcEEEEEECCCCcccccCCCEEEEec-CCCCEEEEEECCCChhhCEEE
Confidence 345566667777765443 34677776431 0 0 01223567776321 234578899999999999999
Q ss_pred EEEEEE
Q psy534 74 ECKVVF 79 (145)
Q Consensus 74 ~C~~~~ 79 (145)
+|.+..
T Consensus 90 ~C~~~~ 95 (142)
T 2ol3_A 90 FCAMRG 95 (142)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 999874
No 474
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.25 E-value=2.5e-06 Score=59.74 Aligned_cols=70 Identities=19% Similarity=0.180 Sum_probs=48.4
Q ss_pred hhhccceeeEEeecCCC--ccEEEEecCCC-Ccc--------------cccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDED--IPVYIWYDSYP-THE--------------AEEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p--~p~~~w~k~~~-~~~--------------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
...+.++.+.|.+.|.| .+.+.||++.. ... .+.+.+|+.+..+ ......+|.|.+++.+|+
T Consensus 134 v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D~ 212 (242)
T 2znx_A 134 VKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRD-TSKNQYYLDLNSVTTEDT 212 (242)
T ss_dssp ECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEE-TTTTEEEEEECSCCGGGC
T ss_pred ecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEec-CCCCEEEEEECCCCcCcC
Confidence 34567788889998876 57899998531 111 1123566665321 123467999999999999
Q ss_pred EEEEEEEE
Q psy534 71 GWYECKVV 78 (145)
Q Consensus 71 G~Y~C~~~ 78 (145)
|.|+|.+.
T Consensus 213 G~Y~C~a~ 220 (242)
T 2znx_A 213 ATYYCANX 220 (242)
T ss_dssp EEEEEEET
T ss_pred EEEEEecc
Confidence 99999996
No 475
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=98.25 E-value=3.6e-07 Score=58.64 Aligned_cols=69 Identities=17% Similarity=0.138 Sum_probs=45.8
Q ss_pred hccceeeEEeecCCC-----ccEEEEecCCCCc-----------ccccccceEEEecCCCCCCeeeEEEcccCC-CCCEE
Q psy534 10 IFQMLSVGDFADDED-----IPVYIWYDSYPTH-----------EAEEYKGRISRVDKESPFGMASLNLTKIRE-SDQGW 72 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p-----~p~~~w~k~~~~~-----------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~-~D~G~ 72 (145)
++..+.+.|.....+ .-.+.|.+++... ..++|. |..++.+++..++.+|+|.+++. +|+|.
T Consensus 15 ~n~~vtLpC~l~~~~~~~~~~m~V~W~~~~~~i~~~~G~~~~~~q~~~~~-~a~l~~~~l~~GnaSL~i~~v~~~sD~G~ 93 (127)
T 2jjs_C 15 GNDTVVIPCFVTNMEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFS-SAKIEVSQLLKGDASLKMDKSDAVSHTGN 93 (127)
T ss_dssp TCSEEEECCBBSSCCCSSGGGEEEEEEETTEEEEEEEGGGTEEECCGGGT-TCBCCGGGGGGTBCCEEEEHHHHHTSCEE
T ss_pred cCCCEEEEEEeCCcCCCCcceEEEEEEECCeEeEeeCCceeecccccccc-ceEechhhhccCcEEEEEcccccccCCcE
Confidence 445555666654321 2345666554221 123355 46677777888999999999998 69999
Q ss_pred EEEEEEE
Q psy534 73 YECKVVF 79 (145)
Q Consensus 73 Y~C~~~~ 79 (145)
|+|++..
T Consensus 94 YtC~v~~ 100 (127)
T 2jjs_C 94 YTCEVTE 100 (127)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999974
No 476
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich, immunoglobulin fold, protein-protein hetero C alpha-beta orthogonal bundle, immune system-hydrolase compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Probab=98.25 E-value=3.1e-06 Score=54.90 Aligned_cols=71 Identities=15% Similarity=0.223 Sum_probs=45.3
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
+..+..+.+-|.+.+. ....+.||+... + .....+++|+.+..+ ....+.+|.|.+++.+|
T Consensus 12 v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~-~~~~~~sL~I~~~~~~D 90 (137)
T 1rjc_A 12 VQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLD-NAKNTLYLQMNSLKPED 90 (137)
T ss_dssp ECTTCCEEEEEECC-CTTTCSEEEEEEECTTSCCEEEEEEETTTCCEEECTTTTTTEEEEEE-C--CEEEEEECSCCGGG
T ss_pred EecCCCEEEEEEecCCcCCCcEEEEEEECCCCCCEEEEEEECCCCceecCcccCCcEEEEEc-CCCCEEEEEECCCCHHH
Confidence 4556677777776542 245677776431 1 011235678876532 23457899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|.|.+..
T Consensus 91 sg~Y~C~~~~ 100 (137)
T 1rjc_A 91 TAMYYCAADT 100 (137)
T ss_dssp CEEEEEEECC
T ss_pred CEEEEEEEEc
Confidence 9999998863
No 477
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.25 E-value=2e-06 Score=51.88 Aligned_cols=25 Identities=44% Similarity=0.704 Sum_probs=23.8
Q ss_pred cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.+++.+|+|.|+|.|.|..|
T Consensus 64 ~~L~i~~v~~~D~G~Y~C~a~N~~g 88 (99)
T 2yr3_A 64 AELHIQDALPEDHGTYTCLAENALG 88 (99)
T ss_dssp EEEEECSCCTTCCBCEEEEEECSSC
T ss_pred EEEEECCCChhhCEEEEEEEEECCC
Confidence 4799999999999999999999998
No 478
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.25 E-value=3.7e-06 Score=59.35 Aligned_cols=69 Identities=10% Similarity=0.038 Sum_probs=46.0
Q ss_pred hhccceeeEEeecCCCccEEEEecCCCC-cc-------------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 9 SIFQMLSVGDFADDEDIPVYIWYDSYPT-HE-------------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 9 ~~~~~~~~~~w~~g~p~p~~~w~k~~~~-~~-------------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
..+.++.+.|.+.+. .+.+.||+.... .. ...+.+|+..... .....+|.|.+++.+|+|.|+
T Consensus 150 ~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~L~I~~v~~~DsG~Y~ 226 (256)
T 3tf7_C 150 VTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRT--TQEDFFLTLESASPSQTSLYF 226 (256)
T ss_dssp ETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECC--SSSBCEEEESSCCGGGCEEEE
T ss_pred eCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeC--CCCeEEEEECCCCHHHCEEEE
Confidence 356677788888876 678999984311 00 0112345444321 234678999999999999999
Q ss_pred EEEEEe
Q psy534 75 CKVVFL 80 (145)
Q Consensus 75 C~~~~~ 80 (145)
|.+.+.
T Consensus 227 C~a~n~ 232 (256)
T 3tf7_C 227 CASSDA 232 (256)
T ss_dssp EEEEEE
T ss_pred EEecCC
Confidence 999753
No 479
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.25 E-value=2.1e-06 Score=60.43 Aligned_cols=69 Identities=17% Similarity=0.155 Sum_probs=47.8
Q ss_pred hhhccceeeEEeecCCCcc-EEEEecCC--CC-c--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIP-VYIWYDSY--PT-H--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYEC 75 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p-~~~w~k~~--~~-~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 75 (145)
...+.++.+.|-+.+.+.+ .+.||++. .. . ....+.+|+.... .....+|.|.+++.+|+|.|+|
T Consensus 153 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~D~G~Y~C 229 (257)
T 3gkz_A 153 ASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSG---SGTSYSLTISSMEAEDAASYFC 229 (257)
T ss_dssp ECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEEEEE
T ss_pred EeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEec---CCCEEEEEECCCChHHCEEEEE
Confidence 3467788888999988777 89999843 11 0 0112335555422 1246779999999999999999
Q ss_pred EEEE
Q psy534 76 KVVF 79 (145)
Q Consensus 76 ~~~~ 79 (145)
.+.+
T Consensus 230 ~~~~ 233 (257)
T 3gkz_A 230 HQWS 233 (257)
T ss_dssp EECS
T ss_pred EEcc
Confidence 9963
No 480
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.24 E-value=2.1e-06 Score=58.84 Aligned_cols=57 Identities=9% Similarity=0.069 Sum_probs=44.4
Q ss_pred hhccceeeEEeecC-CCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 9 SIFQMLSVGDFADD-EDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 9 ~~~~~~~~~~w~~g-~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
..+.++.+.|.+.+ .|.+.+.|++++... ... ..+.+|.|.+++.+|+|.|+|.+.+
T Consensus 101 ~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~---------~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~n 158 (204)
T 3sgj_C 101 KEEDPIHLRCHSWKNTALHKVTYLQNGKGR---------KYF-----HHNSDFYIPKATLKDSGSYFCRGLV 158 (204)
T ss_dssp ETTCCEEEEEEEGGGCCCEEEEEEETTEEE---------EEE-----EECCCEEESSCCGGGCEEEEEEEEE
T ss_pred eCCCcEEEEEEecCCCCCceEEEEECCcEe---------ecc-----cCCceEEECcCCcccCEEEEEEEEe
Confidence 35677888999974 477899999998531 111 1267899999999999999999986
No 481
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.24 E-value=1.4e-06 Score=52.97 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=23.5
Q ss_pred cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.+++.+|+|.|+|.|.|..|
T Consensus 64 ~~L~i~~~~~~D~G~Y~C~a~N~~G 88 (103)
T 3qp3_A 64 LTLEILDCHTDDSGTYRAVCTNYKG 88 (103)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTE
T ss_pred EEEEEcCCCcccCEEEEEEEEeCCC
Confidence 3699999999999999999999998
No 482
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.24 E-value=2.6e-06 Score=52.86 Aligned_cols=58 Identities=9% Similarity=0.041 Sum_probs=40.0
Q ss_pred hhhccceeeEEeecCCCcc-----EEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIP-----VYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p-----~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
...+.++.+.|...+.+.+ .+.|||++... . .. .....|.|.+|+.+|+|.|+|.+.+
T Consensus 19 v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l-~--------~~-----~~~~~l~i~~v~~~dsG~Y~C~~~~ 81 (108)
T 4hwn_A 19 PQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIV-Q--------SR-----GLSSEFQIPTASEDHSGSYWCEAAT 81 (108)
T ss_dssp CBTTCCEEEEEEC---------CCEEEEEETTEEE-E--------EE-----ESCCEEEESSCCGGGCEEEEEEEEC
T ss_pred CCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCc-c--------CC-----CcccEEEeCccCcccCeEEEEEEEe
Confidence 3457788899988766544 49999987431 1 00 1267899999999999999999974
No 483
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.23 E-value=2.6e-06 Score=52.87 Aligned_cols=25 Identities=32% Similarity=0.387 Sum_probs=23.8
Q ss_pred cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.+++.+|+|.|+|.|.|..|
T Consensus 63 ~~L~I~~v~~~D~G~Y~C~a~N~~g 87 (114)
T 2cqv_A 63 SKLTILAARQEHCGCYTLLVENKLG 87 (114)
T ss_dssp EEEEETTCCTTTCEEEEEEEECSSC
T ss_pred EEEEECCCChhcCEEEEEEEEECCC
Confidence 4799999999999999999999998
No 484
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.23 E-value=5e-07 Score=61.04 Aligned_cols=54 Identities=11% Similarity=0.015 Sum_probs=41.4
Q ss_pred hccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 10 IFQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 10 ~~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
.+..+.+.|-+ |.|.+.|+|++..... . .....+|.|.+++.+|+|.|+|.|.|
T Consensus 121 ~G~~v~l~C~~---p~p~i~W~k~g~~i~~--~-----------~~~~~~L~i~~v~~~D~G~Y~C~a~N 174 (186)
T 1jbj_A 121 GDGSVLLTCGL---TDKTIKWLKDGSIISP--L-----------NATKNTWNLGNNAKDPRGTYQCQGAK 174 (186)
T ss_dssp SSCEEEEECSS---SCSCEEEEETTEECCC--S-----------SCCSSCCEEEETTSCCEEEEEEEESS
T ss_pred CCCeEEEEeeC---CCCeEEEEECCEECcc--c-----------CCCcceEEECCCCcCcCEEEEEEEEc
Confidence 56667777766 8899999999854210 0 12378899999999999999999964
No 485
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.23 E-value=9.4e-07 Score=59.26 Aligned_cols=51 Identities=8% Similarity=-0.027 Sum_probs=39.5
Q ss_pred ceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 13 MLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 13 ~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+.+.|-+.|.|.|.+.|++++... . . ...+.|.+++.+|+|.|.|.|.+.
T Consensus 112 ~v~L~C~~~g~p~p~i~W~~~g~~l-~--------~--------~~~~~i~~~~~~d~G~Y~C~a~N~ 162 (176)
T 1hng_A 112 NATLTCEVLEGTDVELKLYQGKEHL-R--------S--------LRQKTMSYQWTNLRAPFKCKAVNR 162 (176)
T ss_dssp TTEEEEECSSCSSCEEEEEETTEEE-E--------E--------ESSSEEEEECSCCSSCEEEEEEET
T ss_pred cEEEEEEecCCCCcEEEEEECCEEC-C--------C--------CCcEEEEEEEccCCeEEEEEEEec
Confidence 4778898999999999999987431 1 1 222566788999999999999864
No 486
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.22 E-value=3.2e-06 Score=54.71 Aligned_cols=69 Identities=17% Similarity=0.231 Sum_probs=48.1
Q ss_pred HhhhccceeeEEeecCCCccEEEEecC-C--CC-cccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEE
Q psy534 7 VKSIFQMLSVGDFADDEDIPVYIWYDS-Y--PT-HEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVF 79 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~p~p~~~w~k~-~--~~-~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 79 (145)
....+..+.+-|.+.+. .+.+.||+. . .. ..-....+|+.... .....+|.|.+++.+|+|.|+|.+..
T Consensus 29 ~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~---~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 101 (134)
T 3kg5_A 29 ARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQ---NESLATLTIQGIRFEDNGIYFCQQKC 101 (134)
T ss_dssp EEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEE---CSSEEEEEECSCCTTTCEEEEEEEEC
T ss_pred EEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEc---cCCEEEEEECCCCcCcCEEEEEEEEc
Confidence 45677888899988765 467889987 3 11 10011245665432 23578999999999999999999864
No 487
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.22 E-value=2.7e-06 Score=60.50 Aligned_cols=71 Identities=11% Similarity=0.104 Sum_probs=49.1
Q ss_pred hhhccceeeEEeecCCCc--cEEEEecCCC---Cc-cc------------ccccceEEEecCCCCCCeeeEEEcccCCCC
Q psy534 8 KSIFQMLSVGDFADDEDI--PVYIWYDSYP---TH-EA------------EEYKGRISRVDKESPFGMASLNLTKIRESD 69 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~--p~~~w~k~~~---~~-~~------------~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D 69 (145)
...+.++.+.|.+.+.+. +.+.||++.. .. +. ..+.+|+.+..+ ......+|.|.+++.+|
T Consensus 150 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~I~~v~~~D 228 (264)
T 2gjj_A 150 VKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVD-TSSSTAFMQLNSLTSED 228 (264)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEE-TTTTEEEEEECSCCGGG
T ss_pred EcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEc-CCCCEEEEEECcCCccc
Confidence 345667888899888764 7899998741 11 10 123456655321 22347899999999999
Q ss_pred CEEEEEEEEE
Q psy534 70 QGWYECKVVF 79 (145)
Q Consensus 70 ~G~Y~C~~~~ 79 (145)
+|.|+|.+.+
T Consensus 229 sG~Y~C~a~n 238 (264)
T 2gjj_A 229 SADYYCVRSG 238 (264)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999999985
No 488
>1zvy_A Immunoglobulin heavy chain antibody variable DOMA; beta sandwich, immunoglobulin fold, protein protein heteroco alpha-beta orthogonal bundle, hydrolase-immune system compl; 1.63A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.22 E-value=3e-06 Score=54.89 Aligned_cols=72 Identities=19% Similarity=0.307 Sum_probs=47.0
Q ss_pred HhhhccceeeEEeecCC--CccEEEEecCCC---C-------------cccccccceEEEecCCCCCCeeeEEEcccCCC
Q psy534 7 VKSIFQMLSVGDFADDE--DIPVYIWYDSYP---T-------------HEAEEYKGRISRVDKESPFGMASLNLTKIRES 68 (145)
Q Consensus 7 ~~~~~~~~~~~~w~~g~--p~p~~~w~k~~~---~-------------~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~ 68 (145)
.+..+..+.+-|.+.+. ....+.||+... + .....+++|+.+..+ ......+|.|.+++.+
T Consensus 11 ~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~-~~~~~~sL~I~~~~~~ 89 (136)
T 1zvy_A 11 SVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQD-KAKNMAYLRMDSVKSE 89 (136)
T ss_dssp ECCTTCCEEEEEEEESCSTTCCEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEE-GGGTEEEEEECSCCGG
T ss_pred EEeCCCCEEEEEEecCCCCCCcEEEEEEECCCCCCEEEEEEeCCCCceeeCcccCCcEEEEEc-CCCCEEEEEECCCChh
Confidence 34566777777777642 235677776531 1 011235678876432 2245789999999999
Q ss_pred CCEEEEEEEEE
Q psy534 69 DQGWYECKVVF 79 (145)
Q Consensus 69 D~G~Y~C~~~~ 79 (145)
|+|.|+|.+..
T Consensus 90 Dsg~Y~C~~~~ 100 (136)
T 1zvy_A 90 DTAIYTCGATR 100 (136)
T ss_dssp GCEEEEEEECS
T ss_pred HCEEEEEEEEe
Confidence 99999998863
No 489
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.22 E-value=6.5e-07 Score=61.50 Aligned_cols=60 Identities=10% Similarity=0.039 Sum_probs=41.1
Q ss_pred ccceeeEEeecCCCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEccc-CCCCCEEEEEEEEE
Q psy534 11 FQMLSVGDFADDEDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKI-RESDQGWYECKVVF 79 (145)
Q Consensus 11 ~~~~~~~~w~~g~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v-~~~D~G~Y~C~~~~ 79 (145)
+.++.+.|- |.|.|.+.|++++... ......+. +. ..+++|.|.++ +.+|+|.|+|.+.+
T Consensus 128 G~~v~L~C~--g~p~p~i~W~k~~~~l-~~~~~~~~-~~-----~~~~~L~I~~v~~~~D~G~Y~C~A~N 188 (204)
T 1sy6_A 128 GTTVILTCP--QYPGSEILWQHNDKNI-GGDEDDKN-IG-----SDEDHLSLKEFSELEQSGYYVCYPRG 188 (204)
T ss_dssp TTEEEEECS--CCCSSCEEEEETTEEE-SCCTTCTT-EE-----EETTEEEETTCCHHHHCEEEEEEETT
T ss_pred CCcEEEEcC--CCCCCceEEEECCEEC-CCccCCce-Ee-----cCCCEEEEeeCCccccCEEEEEEecc
Confidence 444555665 8899999999997532 11111111 11 12789999999 99999999999964
No 490
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=98.21 E-value=1.2e-05 Score=55.43 Aligned_cols=116 Identities=19% Similarity=0.094 Sum_probs=66.7
Q ss_pred hhhccceeeEEeecCCCccEEEEecCCC---Cc--------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDSYP---TH--------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~~~---~~--------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
+..+..+.+-|.+.+.....+.||+... .. ....+.+|+.+.. +......+|.|.+++.+|+|.|+|.
T Consensus 12 v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~-~~~~~~~sL~I~~l~~~DsG~Y~Ca 90 (199)
T 3gsn_A 12 VQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATL-NTKEGYSYLYIKGSQPEDSATYLCA 90 (199)
T ss_dssp EETTCCCEEEEECCCTTCCCEEEEEECTTSCCEEEEEECSTTCCCEETTEECCC-BTTTTEEEEEBSSCCGGGCEEEEEE
T ss_pred EeCCCCEEEEEEEcCCCCCEEEEEEECCCCCcEEEEEECCCCCccccCceEEEE-CCCCCEEEEEEccCcccCCccEEEE
Confidence 4556677777777654344677776431 10 0123467776532 1334578999999999999999999
Q ss_pred EEEecCCCCCCCCCcEEEEEEeEE-ecCCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 77 VVFLNRSPNSHKNGTWFHLDVHGV-FNDGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 77 ~~~~~~~~~~~~~g~~~~l~c~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
+... .....|....|..... ....+.+.+..-. +....+.|.+..-..
T Consensus 91 ~~~~----~~~~fG~GT~L~V~~~~~~~~P~V~~~~~~-~~~~tl~Cl~~gf~P 139 (199)
T 3gsn_A 91 RNTG----NQFYFGTGTSLTVIPNIQNPDPAVYQLRDS-KSSDKSVCLFTDFDS 139 (199)
T ss_dssp EESS----SCEEECSCEEEEEECCCSSCCCEEEECCCS-SSSSSCCEEEETCCT
T ss_pred Eccc----ccccCCCCEEEEEecccCCCCCEEEEcccC-CCCceEEEEeecccC
Confidence 8521 1122244444444432 1222344443322 234679999987654
No 491
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.19 E-value=5.7e-06 Score=56.30 Aligned_cols=59 Identities=10% Similarity=-0.015 Sum_probs=45.3
Q ss_pred hccceeeEEeecC----CCccEEEEecCCCCcccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADD----EDIPVYIWYDSYPTHEAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g----~p~p~~~w~k~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+.++.+.|-+.| .|.|.+.|++++..... .+. .....|.|..+..+|.|.|+|.|.+.
T Consensus 137 ~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~----~~~--------~~~~~L~i~~~~~~~~g~Y~C~a~n~ 199 (214)
T 2zg1_A 137 SGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLD----PET--------TRSSELTLTPRPEDHGTNLTCQMKRQ 199 (214)
T ss_dssp TTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSC----SSC--------CCSSEEEECCCTTCCSCEEEEEEECC
T ss_pred CCCeEEEEEEeccCCCCCCCceEEEeCCCCccCC----CCc--------eeEEEEEEecccHHcCcEEEEEEEeC
Confidence 4667889999876 48899999999754211 111 23788999999999999999999863
No 492
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.19 E-value=9.2e-07 Score=60.33 Aligned_cols=70 Identities=19% Similarity=0.105 Sum_probs=44.8
Q ss_pred hccceeeEEeecC-CCcc-EEEEecCCCCcccccccceEEEec-CCCC-CCeeeEEEcccCCCCCEEEEEEEEEe
Q psy534 10 IFQMLSVGDFADD-EDIP-VYIWYDSYPTHEAEEYKGRISRVD-KESP-FGMASLNLTKIRESDQGWYECKVVFL 80 (145)
Q Consensus 10 ~~~~~~~~~w~~g-~p~p-~~~w~k~~~~~~~~~~~~R~~~~~-~~~~-~~~~sL~I~~v~~~D~G~Y~C~~~~~ 80 (145)
.+..+.+.|.+.| .|.+ .+.|++++... ............ .+.. ....+|.|.+++.+|+|.|.|.|.+.
T Consensus 126 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~-~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~ 199 (213)
T 3d9a_L 126 TSGGASVVCFLNNFYPKDINVKWKIDGSER-QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHK 199 (213)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEEE-CTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECT
T ss_pred CCCcEEEEEEEeeecCCceEEEEEcCCCcC-cceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEc
Confidence 4557889999987 6665 89999987532 211000011100 0000 01458999999999999999999864
No 493
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.19 E-value=2.9e-06 Score=61.22 Aligned_cols=69 Identities=14% Similarity=0.227 Sum_probs=47.7
Q ss_pred hhhccceeeEEeecCCCcc------EEEEecCCC---Cc-cc-------ccccceEEEecCCCCCCeeeEEEcccCCCCC
Q psy534 8 KSIFQMLSVGDFADDEDIP------VYIWYDSYP---TH-EA-------EEYKGRISRVDKESPFGMASLNLTKIRESDQ 70 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p------~~~w~k~~~---~~-~~-------~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~ 70 (145)
...+.++.+.|-+.+.+.+ .+.||++.. .. +. ..+.+|+.... .....+|.|.+++.+|+
T Consensus 171 v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~Ds 247 (291)
T 2gki_A 171 VSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSG---SGTDFTLTISSVQAEDL 247 (291)
T ss_dssp EETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGC
T ss_pred EcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEe---cCCEEEEEECCCCHHHC
Confidence 4456778888999888765 899998641 10 00 11234555421 12357899999999999
Q ss_pred EEEEEEEEE
Q psy534 71 GWYECKVVF 79 (145)
Q Consensus 71 G~Y~C~~~~ 79 (145)
|.|+|.+.+
T Consensus 248 G~Y~C~a~~ 256 (291)
T 2gki_A 248 AVYYCKQSY 256 (291)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEcc
Confidence 999999975
No 494
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.18 E-value=4.8e-06 Score=52.85 Aligned_cols=71 Identities=20% Similarity=0.265 Sum_probs=45.9
Q ss_pred hhhccceeeEEeecCC--CccEEEEecCCCC-----c------ccccccceEEEecCCCCCCeeeEEEcccCCCCCEEEE
Q psy534 8 KSIFQMLSVGDFADDE--DIPVYIWYDSYPT-----H------EAEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYE 74 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~--p~p~~~w~k~~~~-----~------~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 74 (145)
+..+..+.+-|.+... ....+.||+.... . ....+.+|+.+.. +...+..+|.|.+++.+|+|.|+
T Consensus 22 ~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~-~~~~~~~sL~I~~l~~~Dsg~Y~ 100 (122)
T 1hkf_A 22 SVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWD-DPDAGFFTVTMTDLREEDSGHYW 100 (122)
T ss_dssp ECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEE-ETTTTEEEEEECSCCGGGCEEEE
T ss_pred EecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEE-cCcCCEEEEEEeCCCHHHCEEEE
Confidence 4455666666766532 2245667665310 0 1133568887643 23456889999999999999999
Q ss_pred EEEEE
Q psy534 75 CKVVF 79 (145)
Q Consensus 75 C~~~~ 79 (145)
|.+..
T Consensus 101 C~v~~ 105 (122)
T 1hkf_A 101 CRIYR 105 (122)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99863
No 495
>3k74_B Nanobody; immunoglobulin, antibiotic resista methotrexate resistance, NADP, one-carbon metabolism, oxidoreductase, trimethoprim resistance; 1.95A {Lama glama}
Probab=98.18 E-value=5.6e-06 Score=51.81 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=29.4
Q ss_pred ccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEEEE
Q psy534 40 EEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECKVV 78 (145)
Q Consensus 40 ~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 78 (145)
..+++|+.+..+ ......+|.|.+++.+|+|.|+|.+.
T Consensus 60 ~~~~~Rf~~~~~-~~~~~~sL~I~~~~~~Dsg~Y~C~~~ 97 (115)
T 3k74_B 60 ESVKGRFTISRD-NAKNTLYLQMNSLTSEDTAVYYCAKD 97 (115)
T ss_dssp GGGTTTEEEEEE-TTTTEEEEEECSCCGGGCEEEEEEES
T ss_pred ccccccEEEEEc-CCCCEEEEEECCCChHhCEEEEEEEE
Confidence 346788876432 23357899999999999999999875
No 496
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.18 E-value=2.9e-06 Score=51.14 Aligned_cols=24 Identities=29% Similarity=0.533 Sum_probs=23.3
Q ss_pred EEEEcccCCCCCeeeEEEEecCCC
Q psy534 106 ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 106 ~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|.|.+++.+|+|.|+|.|.|..|
T Consensus 63 ~L~i~~v~~~D~G~Y~C~a~n~~g 86 (100)
T 2kdg_A 63 SLIFEVVRASDAGAYACVAKNRAG 86 (100)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTE
T ss_pred EEEECCCCcccCEEEEEEEEcCCC
Confidence 799999999999999999999998
No 497
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.18 E-value=2e-06 Score=52.60 Aligned_cols=27 Identities=41% Similarity=0.601 Sum_probs=21.0
Q ss_pred CCcEEEEcccCCCCCeeeEEEEecCCC
Q psy534 103 DGTELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 103 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.+..|.|.+++.+|+|.|+|.|.|..|
T Consensus 62 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g 88 (108)
T 3kvq_A 62 GNRNLTIRRVRKEDEGLYTCQACSVLG 88 (108)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEC----
T ss_pred CCcEEEEeecCcccCEEEEEEEEeCCC
Confidence 345899999999999999999999998
No 498
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.17 E-value=2.3e-06 Score=51.51 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=23.2
Q ss_pred EEEEcccCCCCCeeeEEEEecCCC
Q psy534 106 ELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 106 ~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
.|.|.+++.+|+|.|+|.|.|..|
T Consensus 63 ~L~i~~v~~~D~G~Y~C~a~N~~g 86 (99)
T 1g1c_A 63 ELVIRDVTGEDSASIMVKAINIAG 86 (99)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTE
T ss_pred EEEECCCCcCCCEEEEEEEEECCC
Confidence 799999999999999999999998
No 499
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.17 E-value=3.3e-06 Score=60.53 Aligned_cols=68 Identities=16% Similarity=0.181 Sum_probs=47.0
Q ss_pred hhhccceeeEEeecCCCccEEEEecC--CCCcc---------cccccceEEEecCCCCCCeeeEEEcccCCCCCEEEEEE
Q psy534 8 KSIFQMLSVGDFADDEDIPVYIWYDS--YPTHE---------AEEYKGRISRVDKESPFGMASLNLTKIRESDQGWYECK 76 (145)
Q Consensus 8 ~~~~~~~~~~~w~~g~p~p~~~w~k~--~~~~~---------~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 76 (145)
...+.++.+.|-+.+.| +.+.|||. +.... .....+|+.... .....+|.|.+++.+|+|.|+|.
T Consensus 174 v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~L~I~~v~~~DsG~Y~C~ 249 (282)
T 1qok_A 174 ASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSG---SGTSYSLTISRMEAEDAATYYCQ 249 (282)
T ss_dssp ECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE---ETTEEEEEESSCCGGGCEEEEEE
T ss_pred EcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEec---CCCEEEEEEccCChhHCEEEEEE
Confidence 44567788889999888 89999993 32210 001234554321 12467899999999999999999
Q ss_pred EEE
Q psy534 77 VVF 79 (145)
Q Consensus 77 ~~~ 79 (145)
+.+
T Consensus 250 a~~ 252 (282)
T 1qok_A 250 QRS 252 (282)
T ss_dssp ECS
T ss_pred Eee
Confidence 963
No 500
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.17 E-value=1.6e-06 Score=51.90 Aligned_cols=25 Identities=20% Similarity=0.290 Sum_probs=23.7
Q ss_pred cEEEEcccCCCCCeeeEEEEecCCC
Q psy534 105 TELRISNIRSQDIGDYTCLATHVLY 129 (145)
Q Consensus 105 ~~L~i~~v~~~d~G~Y~C~a~n~~g 129 (145)
..|.|.+++.+|+|.|+|.|.|..|
T Consensus 58 ~~L~i~~~~~~D~G~Y~C~a~N~~G 82 (93)
T 1wit_A 58 TSIFFPSAKRADSGNYKLKVKNELG 82 (93)
T ss_dssp EEEECTTBCGGGCEEEEEEEEETTE
T ss_pred EEEEECCCChhcCEEEEEEEEcCCC
Confidence 4799999999999999999999998
Done!