BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5340
(164 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 34/138 (24%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLED 84
+DF+ LS+L RG+V EKLRWTF LYDIN DG I +EEM +IV AIY++MGK+ VL++
Sbjct: 109 EDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE 168
Query: 85 GSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDE 144
+ VD VF F+KMDKN+DG+VTLDE
Sbjct: 169 DTPRQHVD-VF---------------------------------FQKMDKNKDGIVTLDE 194
Query: 145 FLECCLNDEDIKRSIQVF 162
FLE C D++I RS+Q+F
Sbjct: 195 FLESCQEDDNIMRSLQLF 212
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 34/138 (24%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLED 84
+DF+ LS+L RG+V EKLRWTF LYDIN DG I +EEM +IV AIY++MGK+ VL++
Sbjct: 73 EDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE 132
Query: 85 GSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDE 144
+ VD VF F+KMDKN+DG+VTLDE
Sbjct: 133 DTPRQHVD-VF---------------------------------FQKMDKNKDGIVTLDE 158
Query: 145 FLECCLNDEDIKRSIQVF 162
FLE C D++I RS+Q+F
Sbjct: 159 FLESCQEDDNIMRSLQLF 176
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 34/139 (24%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLED 84
+DFI+GLS+L RG+V+EKL W F LYDIN DG IT+EEM +I+ A
Sbjct: 122 EDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA--------------- 166
Query: 85 GSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDE 144
IY++MGK VL++ + V++ F+KMDKN+DGVVT+DE
Sbjct: 167 -------------------IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDE 207
Query: 145 FLECCLNDEDIKRSIQVFD 163
F+E C DE+I RS+Q+F+
Sbjct: 208 FIESCQKDENIMRSMQLFE 226
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 80/138 (57%), Gaps = 34/138 (24%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLED 84
+DF+ LS+L RG+V EKLRWTF LYDIN DG I +EEM +IV AIY++MG + VL +
Sbjct: 73 EDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAE 132
Query: 85 GSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDE 144
+ VD VF F+KMDKN+DG+VTLDE
Sbjct: 133 DTPRQHVD-VF---------------------------------FQKMDKNKDGIVTLDE 158
Query: 145 FLECCLNDEDIKRSIQVF 162
FLE C D++I RS+Q+F
Sbjct: 159 FLESCQEDDNIMRSLQLF 176
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 81/138 (58%), Gaps = 34/138 (24%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLED 84
+DF+ LS+L RG+V EKLRWTF LYDIN DG I +EEM +IV AIY++MGK+ VL++
Sbjct: 76 EDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKE 135
Query: 85 GSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDE 144
+ VD VF F+KMDKN+DG+VTLDE
Sbjct: 136 DTPRQHVD-VF---------------------------------FQKMDKNKDGIVTLDE 161
Query: 145 FLECCLNDEDIKRSIQVF 162
FLE D++I RS+Q+F
Sbjct: 162 FLESXQEDDNIMRSLQLF 179
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 109 bits (272), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 81/142 (57%), Gaps = 34/142 (23%)
Query: 22 IFSQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETV 81
I +DF+ GLS+L RG+V EKL+W F LYDIN DG IT+EEM I+ +IY++MG+ +
Sbjct: 146 IHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPI 205
Query: 82 LEDGSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVT 141
L ED + + V+ F+KMD+NQDGVVT
Sbjct: 206 LR---------------------------------EDAPLEH-VERFFQKMDRNQDGVVT 231
Query: 142 LDEFLECCLNDEDIKRSIQVFD 163
+DEFLE C DE+I S+Q+F+
Sbjct: 232 IDEFLETCQKDENIMNSMQLFE 253
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 92.8 bits (229), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 34/128 (26%)
Query: 37 GSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFK 96
G+V EKL+W F LYDIN DG IT+EEM I+ +I
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSI-------------------------- 38
Query: 97 MTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLNDEDIK 156
Y++MG+ +L + + V+ F+KMD+NQDGVVT++EFLE C DE+I
Sbjct: 39 --------YDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIEEFLEACQKDENIM 90
Query: 157 RSIQVFDT 164
S+Q+F+
Sbjct: 91 SSMQLFEN 98
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 34/138 (24%)
Query: 26 DFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDG 85
+FIQ LSV SRG+++EKLRW F LYD++ DG ITR EM +IV AIY+++G E E+
Sbjct: 84 EFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEEN 143
Query: 86 SVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEF 145
+ RVD +F M MDKN DG +TL EF
Sbjct: 144 TPEKRVDRIFAM----------------------------------MDKNADGKLTLQEF 169
Query: 146 LECCLNDEDIKRSIQVFD 163
E D I +++ ++D
Sbjct: 170 QEGSKADPSIVQALSLYD 187
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 71/142 (50%), Gaps = 34/142 (23%)
Query: 22 IFSQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETV 81
I ++FI LS SRG++EEKL W F LYD+N DG IT +EM IV ++Y++MG T+
Sbjct: 80 IHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMV-TL 138
Query: 82 LEDGSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVT 141
ED + + RV +FK MDKN+DG +T
Sbjct: 139 NED---------------------------------EATPEMRVKKIFKLMDKNEDGYIT 165
Query: 142 LDEFLECCLNDEDIKRSIQVFD 163
LDEF E D I ++ ++D
Sbjct: 166 LDEFREGSKVDPSIIGALNLYD 187
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 34/137 (24%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLED 84
++FI LSV SRG +E+KL+W F++YD++G+G I++ EM IV AIY++
Sbjct: 83 REFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKM----------- 131
Query: 85 GSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDE 144
V SV KM ++ + R + +F++MD N+DG ++L+E
Sbjct: 132 ------VSSVMKMPE-----------------DESTPEKRTEKIFRQMDTNRDGKLSLEE 168
Query: 145 FLECCLNDEDIKRSIQV 161
F+ +D I R +Q
Sbjct: 169 FIRGAKSDPSIVRLLQC 185
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 44/159 (27%)
Query: 15 SFAE-IFPIFSQD---------FIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMT 64
+FAE +F +F D FI LSV SRG + +KL W F LYD++ +G I+ +EM
Sbjct: 63 AFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEML 122
Query: 65 NIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNR 124
IV AIY+++G + ++ + RV+ +F M
Sbjct: 123 RIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNM--------------------------- 155
Query: 125 VDSVFKKMDKNQDGVVTLDEFLECCLNDEDIKRSIQVFD 163
MDKN+DG +TL+EF E D I ++ ++D
Sbjct: 156 -------MDKNKDGQLTLEEFCEGSKRDPTIVSALSLYD 187
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 29/136 (21%)
Query: 26 DFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDG 85
+++ L+++ RG++E KL+WTF +YD + +G I R+E+ +IV +IY+L
Sbjct: 80 EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKL------------ 127
Query: 86 SVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEF 145
K V E GK + VD +F +D+N DG ++L+EF
Sbjct: 128 ----------KKACSVEVEAEQQGKLL-------TPEEVVDRIFLLVDENGDGQLSLNEF 170
Query: 146 LECCLNDEDIKRSIQV 161
+E D+ + + +Q+
Sbjct: 171 VEGARRDKWVMKMLQM 186
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 39/128 (30%)
Query: 26 DFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDG 85
+++ LS++ +G V++KLRW F LYD++G+G I R E+ NI+ AI +
Sbjct: 73 EYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAI------------ 120
Query: 86 SVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEF 145
+ N + + TN+ VF K+D N DG ++L+EF
Sbjct: 121 NRCNEAMTAEEFTNM---------------------------VFDKIDINGDGELSLEEF 153
Query: 146 LECCLNDE 153
+E DE
Sbjct: 154 MEGVQKDE 161
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLED 84
++++ L + G +KL W F+LYD++G+G I++ E+ IV AI++ + +L D
Sbjct: 91 KEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLLPD 150
Query: 85 GSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDE 144
++ + R + ++K KN D +T E
Sbjct: 151 --------------------------------DENTPEKRAEKIWKYFGKNDDDKLTEKE 178
Query: 145 FLECCLNDEDIKRSIQ 160
F+E L +++I R IQ
Sbjct: 179 FIEGTLANKEILRLIQ 194
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
++++ L + S G +KL W F+LYD++G+G I++ E+ IVTAI++++
Sbjct: 83 KEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 132
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 41/178 (23%)
Query: 24 SQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGK--FAETV 81
S++ ++ L + ++ + EE W + GRITR+E I + + +A+ V
Sbjct: 9 SKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
Query: 82 LED-----------------------GSVTNRVDSVFKMTN--------------IVTAI 104
G +++ F + + IVTAI
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 105 YELMGKFAETVL--EDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLNDEDIKRSIQ 160
++++ L ++ + R + ++ K D +T EF+E L +++I R IQ
Sbjct: 129 FKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILRLIQ 186
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
++++ L + S G +KL W F+LYD++G+G I++ E+ IVTAI++++
Sbjct: 84 KEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 133
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 41/178 (23%)
Query: 24 SQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGK--FAETV 81
S++ ++ L + ++ + EE W + GRITR+E I + + +A+ V
Sbjct: 10 SKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 69
Query: 82 LED-----------------------GSVTNRVDSVFKMTN--------------IVTAI 104
G +++ F + + IVTAI
Sbjct: 70 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 129
Query: 105 YELMGKFAETVL--EDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLNDEDIKRSIQ 160
++++ L ++ + R + ++ K D +T EF+E L +++I R IQ
Sbjct: 130 FKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILRLIQ 187
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
++++ L + S G +KL W F+LYD++G+G I++ E+ IVTAI++++
Sbjct: 83 KEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 132
Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 41/178 (23%)
Query: 24 SQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGK--FAETV 81
S++ ++ L + ++ + EE W + GRITR+E I + + +A+ V
Sbjct: 9 SKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
Query: 82 LED-----------------------GSVTNRVDSVFKMTN--------------IVTAI 104
G +++ F + + IVTAI
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 105 YELMGKFAETVL--EDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLNDEDIKRSIQ 160
++++ L ++ + R + ++ K D +T EF+E L +++I R IQ
Sbjct: 129 FKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILRLIQ 186
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
++++ L + S G +KL W F+LYD++G+G I++ E+ IVTAI++++
Sbjct: 83 KEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 132
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 41/178 (23%)
Query: 24 SQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGK--FAETV 81
S++ ++ L + ++ + EE W + GRITR+E I + + +A+ V
Sbjct: 9 SKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
Query: 82 LED-----------------------GSVTNRVDSVFKMTN--------------IVTAI 104
G +++ F + + IVTAI
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 105 YELMGKFAETVL--EDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLNDEDIKRSIQ 160
++++ L ++ + R + ++ K D +T EF+E L +++I R IQ
Sbjct: 129 FKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILRLIQ 186
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
+ ++ L + S G +KL W F+LYD++G+G I++ E+ IVTAI++++
Sbjct: 83 KQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 132
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 41/178 (23%)
Query: 24 SQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGK--FAETV 81
S++ ++ L + ++ + EE W + GRITR+E I + + +A+ V
Sbjct: 9 SKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
Query: 82 LED-----------------------GSVTNRVDSVFKMTN--------------IVTAI 104
G +++ F + + IVTAI
Sbjct: 69 FRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 105 YELMGKFAETVL--EDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLNDEDIKRSIQ 160
++++ L ++ + R + ++ K D +T EF+E L +++I R IQ
Sbjct: 129 FKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILRLIQ 186
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 25 QDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
+ ++ L + S G +KL W F+LYD++G+G I++ E+ IVTAI++++
Sbjct: 83 KQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 132
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 41/178 (23%)
Query: 24 SQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGK--FAETV 81
S++ ++ L + ++ + EE W + GRITR+E I + + +A+ V
Sbjct: 9 SKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
Query: 82 LED-----------------------GSVTNRVDSVFKMTN--------------IVTAI 104
G +++ F + + IVTAI
Sbjct: 69 FRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 105 YELMGKFAETVL--EDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLNDEDIKRSIQ 160
++++ L ++ + R + ++ K D +T EF+E L +++I R IQ
Sbjct: 129 FKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEILRLIQ 186
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 40/130 (30%)
Query: 26 DFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDG 85
+FI ++++ + +E+KL+W F LYD +G+G I + E+ ++ A+ L G+ +T+
Sbjct: 78 EFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQ--QTL---- 131
Query: 86 SVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEF 145
S ++ VF K+D N DG +TL+EF
Sbjct: 132 ----------------------------------SPEEFINLVFHKIDINNDGELTLEEF 157
Query: 146 LECCLNDEDI 155
+ D+D+
Sbjct: 158 INGMAKDQDL 167
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 25 QDFIQGLSVLS-RGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAI 70
++FI+G+S S +G E+KLR+ F +YD++ DG I+ E+ ++ +
Sbjct: 73 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 119
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 25 QDFIQGLSVLS-RGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAI 70
++FI+G+S S +G E+KLR+ F +YD++ DG I+ E+ ++ +
Sbjct: 72 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 118
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 26 DFIQGLSVL-SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLED 84
+F++ L V V EK+++ F LYD+ G I REE+ +V A+ +E VL +
Sbjct: 95 EFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE----SELVLSE 150
Query: 85 GSVTNRVDSVF 95
+ VD F
Sbjct: 151 DMIEVMVDKAF 161
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 16/62 (25%)
Query: 101 VTAIYELMGKFAETVLEDGSVT----------NR------VDSVFKKMDKNQDGVVTLDE 144
V A+YEL K + ++++DG + NR D +F D ++GV+ E
Sbjct: 36 VEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGE 95
Query: 145 FL 146
F+
Sbjct: 96 FV 97
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 26 DFIQGLSVL-SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLED 84
+F++ L V V EK+++ F LYD+ G I REE+ +V A+ +E VL +
Sbjct: 95 EFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE----SELVLSE 150
Query: 85 GSVTNRVDSVF 95
+ VD F
Sbjct: 151 DMIEVMVDKAF 161
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 16/62 (25%)
Query: 101 VTAIYELMGKFAETVLEDGSVT----------NR------VDSVFKKMDKNQDGVVTLDE 144
V A+YEL K + ++++DG + NR D +F D ++GV+ E
Sbjct: 36 VEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGE 95
Query: 145 FL 146
F+
Sbjct: 96 FV 97
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 25 QDFIQGLSVLS-RGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAI 70
++FI+G+S S +G E+KLR+ F +YD++ DG I+ E+ ++ +
Sbjct: 59 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 105
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 25 QDFIQGLSVLS-RGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAI 70
++FI+G+S S +G E+KLR+ F +YD++ DG I+ E+ ++ +
Sbjct: 58 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 104
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 25 QDFIQGLSVL-SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMG-KFAETVL 82
++F + LSV +++K+ ++F LYD+ G I R+E+ +V A G +TV+
Sbjct: 74 EEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVI 133
Query: 83 ED 84
ED
Sbjct: 134 ED 135
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 24/95 (25%)
Query: 92 DSVFKMTNIVTAIYELMGKFAETVLEDGSV-----------TNR-----VDSVFKKMDKN 135
D+VF ++ I A+YEL K + V++DG + TN+ D VF D
Sbjct: 8 DTVFSVSEI-EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTK 66
Query: 136 QDGVVTLDEFLEC-------CLNDEDIKRSIQVFD 163
+G++ +EF D+ I S Q++D
Sbjct: 67 HNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYD 101
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 25 QDFIQGLSVL-SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMG-KFAETVL 82
++F + LSV +++K+ ++F LYD+ G I R+E+ +V A G +TV+
Sbjct: 105 EEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVI 164
Query: 83 ED 84
ED
Sbjct: 165 ED 166
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 24/95 (25%)
Query: 92 DSVFKMTNIVTAIYELMGKFAETVLEDGSV-----------TNR-----VDSVFKKMDKN 135
D+VF ++ I A+YEL K + V++DG + TN+ D VF D
Sbjct: 39 DTVFSVSEI-EALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTK 97
Query: 136 QDGVVTLDEFLEC-------CLNDEDIKRSIQVFD 163
+G++ +EF D+ I S Q++D
Sbjct: 98 HNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYD 132
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 25 QDFIQGLSVLSRGSVEE-KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLE 83
+DF+ LSV S + + K + F ++D + DG + RE+++ +V L G+ +T L
Sbjct: 81 EDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNC---LTGEGEDTRLS 137
Query: 84 DGSVTNRVDSVFKMTNI 100
+ +D++ + ++I
Sbjct: 138 ASEMKQLIDNILEESDI 154
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 25 QDFIQGLSVLSRGSVEE-KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLE 83
+DF+ LSV S + + K + F ++D + DG + RE+++ +V L G+ +T L
Sbjct: 112 EDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNC---LTGEGEDTRLS 168
Query: 84 DGSVTNRVDSVFKMTNI 100
+ +D++ + ++I
Sbjct: 169 ASEMKQLIDNILEESDI 185
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 38 SVEEKLRWTFTLYDINGDGRITREEMTNIV 67
S KL + F LYD++ DG+I+R EM ++
Sbjct: 111 SRRNKLHYAFQLYDLDRDGKISRHEMLQVL 140
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 21/130 (16%)
Query: 40 EEKLRWTFTLY-DINGDGRITREEMTNIVTAIYELMG--------KFAETVLED--GSVT 88
++K+++TF + D+N DG I + +++T E+ K + LED +
Sbjct: 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLK 66
Query: 89 NRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVT-------NRVDSVFKKMDKNQDGVVT 141
R D + V + E + + +T+ SV NR+ +FK MD + DG+V
Sbjct: 67 GRADI---NKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVD 123
Query: 142 LDEFLECCLN 151
L+EF C N
Sbjct: 124 LEEFQNYCKN 133
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 105 YELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN------DEDIKRS 158
Y ++ F + E +V VD++ K++D +++G + EF+ C++ +E ++R+
Sbjct: 381 YNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRA 440
Query: 159 IQVFDT 164
+FDT
Sbjct: 441 FNLFDT 446
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNI--VTAIYE 72
EE+LR F L+D + G+IT+EE+ N+ +T+I E
Sbjct: 434 EERLRRAFNLFDTDKSGKITKEELANLFGLTSISE 468
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNI- 100
+ ++ F DING+G+IT +E+ + A ++ K T + V++ FK +
Sbjct: 24 RHKFMFNFLDINGNGKITLDEI--VSKASDDICAKLGATPAQTQRHQEAVEAFFKKIGLD 81
Query: 101 ------VTAIYELMGKFAETVLEDGS------VTNRVDSVFKKMDKNQDGVVTLDEFLE- 147
A + A+ L+ S + N ++VF DK+ G ++LDE+
Sbjct: 82 YGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTY 141
Query: 148 -----CCLNDEDIKRSIQVFD 163
C +DED +++ + D
Sbjct: 142 GGISGICPSDEDAEKTFKHCD 162
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 33.5 bits (75), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE-LMGKFAETVLEDGSVTN--RV 91
++G EE+L F ++D N DG I EE+ I A E + + E++++DG N R+
Sbjct: 87 AKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRI 146
Query: 92 D 92
D
Sbjct: 147 D 147
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 50/108 (46%)
Query: 43 LRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIVT 102
L+ + L D++GDG++T+EE+T S FK I
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVT----------------------------SFFKKHGIE- 107
Query: 103 AIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCL 150
K AE V+ K D N DG +TL+EFLE L
Sbjct: 108 -------KVAEQVM--------------KADANGDGYITLEEFLEFSL 134
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 50/108 (46%)
Query: 43 LRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIVT 102
L+ + L D++GDG++T+EE+T S FK I
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVT----------------------------SFFKKHGIE- 107
Query: 103 AIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCL 150
K AE V+ K D N DG +TL+EFLE L
Sbjct: 108 -------KVAEQVM--------------KADANGDGYITLEEFLEFSL 134
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 43 LRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIVT 102
+ F L+D +GDG IT EE+ T I L E L+D + + VD+ T
Sbjct: 12 FKEAFGLFDKDGDGCITVEELA---TVIRSLDQNPTEEELQD--MISEVDADGNGTIEFD 66
Query: 103 AIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN------DEDIK 156
LM K ++D + FK DK+Q+G ++ E +N DE+++
Sbjct: 67 EFLSLMAK----KVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVE 122
Query: 157 RSIQVFD 163
+ I+ D
Sbjct: 123 QMIKEAD 129
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 33.1 bits (74), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE-LMGKFAETVLEDGSVTN--RV 91
++G EE+L F ++D N DG I EE+ I A E + + E++++DG N R+
Sbjct: 87 AKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRI 146
Query: 92 D 92
D
Sbjct: 147 D 147
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 32.7 bits (73), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 47 FTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIVTAIYE 106
F D NGDG++ R+E+ + +L G+ V + + + VD++ + Y
Sbjct: 69 FRHIDKNGDGQLDRQEL---IDGYSKLSGEEV-AVFDLPQIESEVDAILGAADFDRNGYI 124
Query: 107 LMGKFAETVLEDGSV--TNRVDSVFKKMDKNQDGVVTLDEF 145
+F ++ S+ ++++S F+K D++ +G +++DE
Sbjct: 125 DYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDEL 165
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 46/113 (40%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSV 94
S+G EE+L F ++D N DG I EE+ ++ A ET+ ED
Sbjct: 89 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------GETITED---------- 131
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
I ELM K DKN DG + DEFLE
Sbjct: 132 --------DIEELM---------------------KDGDKNNDGRIDYDEFLE 155
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 47 FTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIVTAIYE 106
F D NGDG++ R+E+ + +L G+ V + + + VD++ + Y
Sbjct: 352 FRHIDKNGDGQLDRQEL---IDGYSKLSGEEV-AVFDLPQIESEVDAILGAADFDRNGYI 407
Query: 107 LMGKFAETVLEDGSV--TNRVDSVFKKMDKNQDGVVTLDEF 145
+F ++ S+ ++++S F+K D++ +G +++DE
Sbjct: 408 DYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDEL 448
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 46/113 (40%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSV 94
S+G EE+L F ++D N DG I EE+ ++ A ET+ ED
Sbjct: 89 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------GETITED---------- 131
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
I ELM K DKN DG + DEFLE
Sbjct: 132 --------DIEELM---------------------KDGDKNNDGRIDYDEFLE 155
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 50/108 (46%)
Query: 43 LRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIVT 102
L+ + L D++GDG++T+EE+T S FK I
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVT----------------------------SFFKKHGIE- 37
Query: 103 AIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCL 150
K AE V+ K D N DG +TL+EFLE L
Sbjct: 38 -------KVAEQVM--------------KADANGDGYITLEEFLEFSL 64
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 46/113 (40%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSV 94
S+G EE+L F ++D N DG I EE+ ++ A ET+ ED
Sbjct: 4 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------GETITED---------- 46
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
I ELM K DKN DG + DEFLE
Sbjct: 47 --------DIEELM---------------------KDGDKNNDGRIDYDEFLE 70
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 46/113 (40%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSV 94
S+G EE+L F ++D N DG I EE+ ++ A ET+ ED
Sbjct: 9 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------GETITED---------- 51
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
I ELM K DKN DG + DEFLE
Sbjct: 52 --------DIEELM---------------------KDGDKNNDGRIDYDEFLE 75
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 128 VFKKMDKNQDGVVTLDEFLECCL 150
VF+K DKN+DG ++LDEF E L
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVAL 28
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 46/113 (40%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSV 94
S+G EE+L F ++D N DG I EE+ ++ A ET+ ED
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------GETITED---------- 131
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
I ELM K DKN DG + DEFLE
Sbjct: 132 --------DIEELM---------------------KDGDKNNDGRIDYDEFLE 155
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EEKL+ F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 65
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
LM + ++D ++ F+ DK+ +G ++ E N
Sbjct: 66 PEFLNLMAR----KMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTN 111
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTN 99
E+ L+ F DI+G+G I E T A+ E L D V ++
Sbjct: 35 EQLLQLIFKAIDIDGNGEIDLAEFTKFAAAV-------KEQDLSDEKVGLKI-------- 79
Query: 100 IVTAIYELM-----GKFAE----TVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCL 150
+Y+LM GK + T + VD + K D N DG +TL+EFL L
Sbjct: 80 ----LYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIM-KADANGDGYITLEEFLAFNL 134
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
LM + ++D + F+ DK+Q+G ++ E N
Sbjct: 67 PEFLNLMAR----KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 112
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
LM + ++D + F+ DK+Q+G ++ E N
Sbjct: 67 PEFLNLMAR----KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 112
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
++G EE+L F ++D N DG I EE+ I+ A E
Sbjct: 90 AKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGE 127
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXL 117
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 67 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E +
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXL 116
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 65
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 66 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 26 DFIQGLSVLSRG--SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 112
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 68 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 118
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 69
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 70 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 115
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 67 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
++G EE+L F ++D N DG I EE+ I+ A E
Sbjct: 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE 127
Score = 26.2 bits (56), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAI-----YELMGKFAETVLEDGSVTNRVDSVFK 96
+ + F ++D +G G I+ +E+ ++ + E + E V EDGS T
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT------ID 74
Query: 97 MTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
+ + M + A+ G + + F+ DKN DG + ++E E
Sbjct: 75 FEEFLVMMVRQMKEDAK-----GKSEEELANCFRIFDKNADGFIDIEELGE 120
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 15/128 (11%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN------DEDI 155
+M + ++D + F+ DK+ +G ++ E N DE++
Sbjct: 67 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 156 KRSIQVFD 163
+ I+ D
Sbjct: 123 DQMIREAD 130
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 65
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 66 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 70 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 120
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 71
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 72 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 117
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 66 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 116
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 67
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 68 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 113
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 65
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 66 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 67 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 67 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGDGTIDF 65
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 66 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
++G EE+L F ++D N DG I EE+ I+ A E
Sbjct: 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE 127
Score = 26.2 bits (56), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAI-----YELMGKFAETVLEDGSVTNRVDSVFK 96
+ + F ++D +G G I+ +E+ ++ + E + E V EDGS T
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT------ID 74
Query: 97 MTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
+ + M + A+ G + + F+ DKN DG + ++E E
Sbjct: 75 FEEFLVMMVRQMKEDAK-----GKSEEELANCFRIFDKNADGFIDIEELGE 120
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
++G EE+L F ++D N DG I EE+ I+ A E
Sbjct: 4 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE 41
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 112
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 63
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 64 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 109
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 65
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 66 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 60 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 110
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 61
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 62 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 107
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
++G EE+L F ++D N DG I EE+ I+ A E
Sbjct: 87 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE 124
Score = 26.2 bits (56), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAI-----YELMGKFAETVLEDGSVTNRVDSVFK 96
+ + F ++D +G G I+ +E+ ++ + E + E V EDGS T
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT------ID 71
Query: 97 MTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
+ + M + A+ G + + F+ DKN DG + ++E E
Sbjct: 72 FEEFLVMMVRQMKEDAK-----GKSEEELANCFRIFDKNADGFIDIEELGE 117
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 112
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 63
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 64 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 109
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 112
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 63
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 64 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 109
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 67 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 113
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 64
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 65 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 110
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 111
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 62
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 63 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 108
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 41/112 (36%), Gaps = 46/112 (41%)
Query: 36 RGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVF 95
+G EE+L F ++D N DG I EE+ ++ A ET+ ED
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------GETITED----------- 43
Query: 96 KMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
I ELM K DKN DG + DEFLE
Sbjct: 44 -------DIEELM---------------------KDGDKNNDGRIDYDEFLE 67
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
++G EE+L F ++D N DG I EE+ I+ A E
Sbjct: 90 AKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGE 127
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 38 SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIY------ELMGKFAETVLEDGSVTNRV 91
S KL + F LYD++ D +I+R+E+ ++ + E +G A+ +++
Sbjct: 110 SRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDG-- 167
Query: 92 DSVFKMTNIVTAI 104
DS T V +
Sbjct: 168 DSAISFTEFVKVL 180
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 381
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 332
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 333 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 378
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 46/113 (40%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSV 94
S+G EE+L F ++D N DG I +E+ ++ A ET+ ED
Sbjct: 89 SKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQAT-------GETITED---------- 131
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
I ELM K DKN DG + DEFLE
Sbjct: 132 --------DIEELM---------------------KDGDKNNDGRIDYDEFLE 155
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 381
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 332
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 333 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 378
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFA-ETVLEDGSVTN--RV 91
S+G EE+L F ++D N DG I +E+ ++ A E + + E +++DG N R+
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
Query: 92 D 92
D
Sbjct: 149 D 149
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 378
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 329
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 330 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 375
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 414
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIY------ELMGKFAETVLEDGSVTNRVDSVF 95
KL + F LYD++ D +I+R+E+ ++ + E +G A+ +++ DS
Sbjct: 114 KLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDG--DSAI 171
Query: 96 KMTNIVTAI 104
T V +
Sbjct: 172 SFTEFVKVL 180
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 414
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGDGTIDF 365
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 366 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 411
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 414
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 415
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 415
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 366
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 367 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 412
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 29.6 bits (65), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 114
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 65
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 66 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 111
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 415
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 366
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 367 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 412
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 114
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 65
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 66 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 111
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 47 FTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNI------ 100
F D+N +G+I+ +EM + I ++ T + + V++ F +
Sbjct: 22 FNFLDVNHNGKISLDEMVYKASDI--VINNLGATPEQAKRHKDAVEAFFGGAGMKYGVET 79
Query: 101 -VTAIYELMGKFAETVLEDGSVTNRV------DSVFKKMDKNQDGVVTLDEF 145
A E K A LE + D++F +DK+Q+G +TLDE+
Sbjct: 80 DWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEW 131
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 115
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 67 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 112
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 115
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 67 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 112
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 115
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 66
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 67 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 112
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 416
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 367
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 368 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 413
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 415
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFA-ETVLEDGSVTN--RV 91
S+G EE+L F ++D N DG I +E+ ++ A E + + E +++DG N R+
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
Query: 92 D 92
D
Sbjct: 149 D 149
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE+L+ F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 65
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
LM + ++D + F+ DK+ +G ++ E N
Sbjct: 66 PEFLNLMAR----KMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTN 111
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 41/151 (27%)
Query: 41 EKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNI 100
++L F D NGDG++ R E+ + + G+ A ++L+ +V + VD V +
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDA-SMLDASAVEHEVDQVLDAVDF 393
Query: 101 VTAIYELMGKFAETVLEDGSVTNR-------------------------------VDS-- 127
Y +F ++ ++ +R VDS
Sbjct: 394 DKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSET 453
Query: 128 ---VFKKMDKNQDGVVTLDEF----LECCLN 151
V ++DKN DG V DEF L+ C N
Sbjct: 454 WKSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 484
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE+L+ F ++D +G+G I+ E+ +++T + E
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGE 111
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 62
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
LM + ++D + F+ DK+ +G ++ E N
Sbjct: 63 PEFLNLMAR----KMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTN 108
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGNGTIDF 366
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M ++ ++D + F+ DK+ +G ++ E N
Sbjct: 367 PEFLTMMARW----MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 412
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSR----GSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L++++R EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 415
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAI 70
DF + L++++R EE++R F ++D +G+G I+ E+ +++T +
Sbjct: 19 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 41/151 (27%)
Query: 41 EKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNI 100
++L F D NGDG++ R E+ + + G+ A ++L+ +V + VD V +
Sbjct: 358 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDA-SMLDASAVEHEVDQVLDAVDF 416
Query: 101 VTAIYELMGKFAETVLEDGSVTNR-------------------------------VDS-- 127
Y +F ++ ++ +R VDS
Sbjct: 417 DKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSET 476
Query: 128 ---VFKKMDKNQDGVVTLDEF----LECCLN 151
V ++DKN DG V DEF L+ C N
Sbjct: 477 WKSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 507
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 41/151 (27%)
Query: 41 EKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNI 100
++L F D NGDG++ R E+ + + G+ A ++L+ +V + VD V +
Sbjct: 359 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDA-SMLDASAVEHEVDQVLDAVDF 417
Query: 101 VTAIYELMGKFAETVLEDGSVTNR-------------------------------VDS-- 127
Y +F ++ ++ +R VDS
Sbjct: 418 DKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSET 477
Query: 128 ---VFKKMDKNQDGVVTLDEF----LECCLN 151
V ++DKN DG V DEF L+ C N
Sbjct: 478 WKSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 508
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 41/113 (36%), Gaps = 46/113 (40%)
Query: 35 SRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSV 94
S+G EE+L F + D N DG I +E+ ++ A ET+ ED
Sbjct: 89 SKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQAT-------GETITED---------- 131
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
I ELM K DKN DG + DEFLE
Sbjct: 132 --------DIEELM---------------------KDGDKNNDGRIDYDEFLE 155
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVT 68
+LR F + D N DGR+T EE+ I+
Sbjct: 99 RLRTFFDMVDKNADGRLTAEEVKEIIA 125
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 73 LMGKFAETVLEDGS---VTNRVDSVFKMTNIVTAIY--ELMGKFAETVLEDGSVTNRVDS 127
L +F + + DGS DS+ + IV + + + F E + + G NR+ +
Sbjct: 44 LRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQG-FDNRLRT 102
Query: 128 VFKKMDKNQDGVVTLDEFLE 147
F +DKN DG +T +E E
Sbjct: 103 FFDMVDKNADGRLTAEEVKE 122
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 37/130 (28%)
Query: 41 EKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNI 100
++L+ F +D +G+G + R + I E GK A V + N
Sbjct: 7 DRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAA-----------EVQTLKNA 55
Query: 101 VTAIYELMGKFAETVLEDGSVT--------------------NR-----VDSVFKKMDKN 135
+++ + K A V DGS+T NR V + DKN
Sbjct: 56 FGGLFDYLAKEA-GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKN 114
Query: 136 QDGVVTLDEF 145
DG + DEF
Sbjct: 115 ADGQINADEF 124
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 2 NTHDKWERTLSLLSFAEIFPIFSQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITRE 61
TH E++L F E P + +GL +G+ + + F +D G G I+
Sbjct: 51 GTHKMGEKSLP---FEEFLPAY-----EGLMDCEQGTFADYME-AFKTFDREGQGFISGA 101
Query: 62 EMTNIVTAIYELM 74
E+ +++TA+ E +
Sbjct: 102 ELRHVLTALGERL 114
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 2 NTHDKWERTLSLLSFAEIFPIFSQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITRE 61
TH E++L F E P + +GL +G+ + + F +D G G I+
Sbjct: 54 GTHKMGEKSLP---FEEFLPAY-----EGLMDCEQGTFADYME-AFKTFDREGQGFISGA 104
Query: 62 EMTNIVTAIYELM 74
E+ +++TA+ E +
Sbjct: 105 ELRHVLTALGERL 117
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 2 NTHDKWERTLSLLSFAEIFPIFSQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITRE 61
TH E++L F E P + +GL +G+ + + F +D G G I+
Sbjct: 52 GTHKMGEKSLP---FEEFLPAY-----EGLMDCEQGTFADYME-AFKTFDREGQGFISGA 102
Query: 62 EMTNIVTAIYELM 74
E+ +++TA+ E +
Sbjct: 103 ELRHVLTALGERL 115
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEF 145
+++ +T +++ G ++ + + N +D V + DKN DG + EF
Sbjct: 88 LELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEF 138
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 2 NTHDKWERTLSLLSFAEIFPIFSQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITRE 61
TH E++L F E P + +GL +G+ + + F +D G G I+
Sbjct: 54 GTHKMGEKSLP---FEEFLPAY-----EGLMDCEQGTFADYME-AFKTFDREGQGFISGA 104
Query: 62 EMTNIVTAIYELM 74
E+ +++TA+ E +
Sbjct: 105 ELRHVLTALGERL 117
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 2 NTHDKWERTLSLLSFAEIFPIFSQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITRE 61
TH E++L F E P + +GL +G+ + + F +D G G I+
Sbjct: 54 GTHKMGEKSLP---FEEFLPAY-----EGLMDCEQGTFADYME-AFKTFDREGQGFISGA 104
Query: 62 EMTNIVTAIYELM 74
E+ +++TA+ E +
Sbjct: 105 ELRHVLTALGERL 117
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 2 NTHDKWERTLSLLSFAEIFPIFSQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITRE 61
TH E++L F E P + +GL +G+ + + F +D G G I+
Sbjct: 51 GTHKMGEKSLP---FEEFLPAY-----EGLMDCEQGTFADYME-AFKTFDREGQGFISGA 101
Query: 62 EMTNIVTAIYELM 74
E+ +++TA+ E +
Sbjct: 102 ELRHVLTALGERL 114
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEF 145
+++ +T +++ G ++ + + N +D V + DKN DG + EF
Sbjct: 69 LELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEF 119
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 95 FKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEF 145
+++ +T +++ G ++ + + N +D V + DKN DG + EF
Sbjct: 38 LELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEF 88
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + LS+++R EE+L F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE 114
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ N
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDAD---GNGT 62
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
E + A + E S +++ FK D++ +G+++ E N
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEA-FKVFDRDGNGLISAAELRHVMTN 111
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + LS+++R EE+L F ++D +G+G I+ E+ +++T + E
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE 114
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ N
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDAD---GNGT 62
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
E + A + E S +++ FK D++ +G+++ E N
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEA-FKVFDRDGNGLISAAELRHVMTN 111
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF + L +++R EE++R F ++D +G+G ++ E+ +++T + E
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGE 114
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT E+ ++ ++ + E L D + + +D + N
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQ---NPTEAELRD--MMSEID---RDGNGT 62
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECC------LNDEDI 155
E +G A ++D + F+ DK+ +G V+ E L+DE++
Sbjct: 63 VDFPEFLGMMARK-MKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEV 121
Query: 156 KRSIQVFDT 164
I+ DT
Sbjct: 122 DEMIRAADT 130
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 114 TVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEF 145
++L+ GS +D +F+++DKN DG V+ +EF
Sbjct: 38 SLLKGGST---LDELFEELDKNGDGEVSFEEF 66
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 114 TVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEF 145
++L+ GS +D +F+++DKN DG V+ +EF
Sbjct: 39 SLLKGGST---LDELFEELDKNGDGEVSFEEF 67
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 36 RGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVF 95
R EE++ F ++D NGDG I +E I M K E L D V +
Sbjct: 3 RQDDEEEILRAFKVFDANGDGVIDFDEFKFI-------MQKVGEEPLTDAEVEEAMKEAD 55
Query: 96 KMTNIVTAIYELM 108
+ N V I E M
Sbjct: 56 EDGNGVIDIPEFM 68
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 28 IQGLSVLSRGSVEEKLRWTFTLYDINGDGRITREEMTN 65
+ LS+ V+E + D N DG+I++EE N
Sbjct: 36 LDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLN 73
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 20/119 (16%)
Query: 38 SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKM 97
++E+++ L D++G G I E I +AI T+L R++ FKM
Sbjct: 378 TIEDQIDSLMPLLDMDGSGSIEYSEF--IASAI-------DRTIL---LSRERMERAFKM 425
Query: 98 TNI----VTAIYELMGKFAETVLEDGSVT-NRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+ + EL F++ D S+ ++S+ +++D N+DG V +EF+E N
Sbjct: 426 FDKDGSGKISTKELFKLFSQA---DSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 374 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 406
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIV 101
+ + F+L+D +GDG IT +E+ ++ ++ + E L+D + N VD+ T
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQ---NPTEAELQD--MINEVDADGDGTIDF 357
Query: 102 TAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLECCLN 151
+M + ++D + F+ DK+ +G ++ E N
Sbjct: 358 PEFLIMMAR----KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 403
>pdb|3O0L|A Chain A, Crystal Structure Of A Pfam Duf1425 Family Member
(Shew_1734) From Shewanella Sp. Pv-4 At 1.81 A
Resolution
pdb|3O0L|B Chain B, Crystal Structure Of A Pfam Duf1425 Family Member
(Shew_1734) From Shewanella Sp. Pv-4 At 1.81 A
Resolution
Length = 112
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 32 SVLSRGSVEEKLRWTFTLYDING 54
+++S+ +++L++ FT YDING
Sbjct: 45 TIISKSPKDQRLQYKFTWYDING 67
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
DF + L+ +R EE++R F ++D +G+G I+ E+ ++ T + E +
Sbjct: 65 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKL 117
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 39
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 40
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
EE++R F ++D +G+G I+ E+ ++ T + E +
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKL 116
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 40/111 (36%), Gaps = 46/111 (41%)
Query: 37 GSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFK 96
G EE+L F ++D N DG I +E+ ++ A ET+ ED
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQAT-------GETITED------------ 42
Query: 97 MTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
I ELM K DKN DG + DEFLE
Sbjct: 43 ------DIEELM---------------------KDGDKNNDGRIDYDEFLE 66
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 36
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
DF + L+ +R EE++R F ++D +G+G I+ E+ ++ T + E +
Sbjct: 64 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKL 116
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 33
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 37
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 42/117 (35%)
Query: 32 SVLSRGSVEEKLRW-TFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNR 90
+ L R + +KL + F ++D++ DG IT E+ +I +Y K G++T R
Sbjct: 112 AALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHI---LYNGNKK--------GNITQR 160
Query: 91 VDSVFKMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
NRV + + +DKN DG + EF E
Sbjct: 161 D------------------------------VNRVKRMIRDVDKNNDGKIDFHEFSE 187
Score = 26.2 bits (56), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 41 EKLRWTFTLYDINGDGRITREEM 63
EKL+ TF + D +G G IT+E++
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQL 74
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
EE++R F ++D +G+G I+ E+ +++T + E
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 36
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 42 KLRWTFTLYDINGDGRITREEMTNIVTAI 70
+ + F+LYD +GDG IT +E+ ++ ++
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSL 39
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
++VF+++D ++DG +T EF
Sbjct: 63 AEAVFQRLDADRDGAITFQEF 83
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 43 LRWTFTLYDINGDGRITREEMTNIVTAI 70
+ F L+D +GDG IT EE+ ++ ++
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|3FRN|A Chain A, Crystal Structure Of Flagellar Protein Flga From
Thermotoga Maritima Msb8
Length = 278
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 43 LRWTFTLYDING--DGRITREEMTNIVTAIYELMGKFAET 80
LR F YD G + RIT E +++ A++E +GK AE
Sbjct: 50 LRTKFPEYDFTGPENVRITVEGYSSLKNAVFEEIGKKAEA 89
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 26 DFIQGLSVLSRG----SVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
DF Q L++++R EE++R F ++ +G+G I+ ++ +++T + E
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGE 415
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
+D +F+++DKN DG V+ +EF
Sbjct: 49 LDDLFQELDKNGDGEVSFEEF 69
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 43 LRWTFTLYDINGDGRITREEMTNIVTAI 70
+ F L+D +GDG IT EE+ ++ ++
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
+D +F+++DKN DG V+ +EF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
+D +F+++DKN DG V+ +EF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
+D +F+++DKN DG V+ +EF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
+D +F+++DKN DG V+ +EF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 64 TNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTN 123
T + A+ L+ F + V + V N++ ++ E++ K +L D
Sbjct: 4 TELEKAVIVLVENFYKYVSKYSLVKNKISK--------SSFREMLQKELNHMLSDTGNRK 55
Query: 124 RVDSVFKKMDKNQDGVVTLDEF 145
D + + +D N DG ++ DE+
Sbjct: 56 AADKLIQNLDANHDGRISFDEY 77
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 126 DSVFKKMDKNQDGVVTLDEF 145
D++F +DK+Q+G +TLDE+
Sbjct: 112 DALFDIVDKDQNGAITLDEW 131
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
+D +F+++DKN DG V+ +EF
Sbjct: 50 LDELFEELDKNGDGEVSFEEF 70
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
+D +F+++DKN DG V+ +EF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 64 TNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNIVTAIYELMGKFAETVLEDGSVTN 123
T + A+ L+ F + V + V N++ ++ E++ K +L D
Sbjct: 5 TELEKAVIVLVENFYKYVSKYSLVKNKISK--------SSFREMLQKELNHMLSDTGNRK 56
Query: 124 RVDSVFKKMDKNQDGVVTLDEF 145
D + + +D N DG ++ DE+
Sbjct: 57 AADKLIQNLDANHDGRISFDEY 78
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 119 GSVTNRVDSVFKKMDKNQDGVVTLDEF 145
G+ ++FK++DKN G VT DEF
Sbjct: 163 GAKVEDPAALFKELDKNGTGSVTFDEF 189
Score = 26.6 bits (57), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 128 VFKKMDKNQDGVVTLDEFLECCL 150
+FKK DKN+ G + DE CL
Sbjct: 53 LFKKFDKNETGKLXYDEVYSGCL 75
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 39 VEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
++++LR F LYD G+G I+ + M I+ + E +
Sbjct: 89 MQQELREAFRLYDKEGNGYISTDVMREILAELDETL 124
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 112 AETVLEDGSVTNRVDSVFKKMDKNQDGVVTLDEFLE 147
ET+ ED ++ + K DKN DG + DEFLE
Sbjct: 35 GETITEDD-----IEELMKDGDKNNDGRIDYDEFLE 65
>pdb|1SNL|A Chain A, Nmr Solution Structure Of The Calcium-Binding Domain Of
Nucleobindin (Calnuc)
Length = 103
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 126 DSVFKKMDKNQDGVVTLDEFL 146
+ V K +D NQD +VTL+EFL
Sbjct: 75 EHVMKNVDTNQDRLVTLEEFL 95
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
+D +F+++DKN DG V+ +EF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 125 VDSVFKKMDKNQDGVVTLDEF 145
+D +F+++DKN DG V+ +EF
Sbjct: 45 LDELFEELDKNGDGEVSFEEF 65
>pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin
Derivative 15
pdb|3Q44|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin
Derivative 16
Length = 891
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 11 LSLLSFAEIFPIFSQDFIQGLSV-----LSRGSVEEKLRWTFTLYD----INGDGRITRE 61
LSLLS A+ I ++ S L+ SV F LYD ++ D + +
Sbjct: 708 LSLLSKAQYPNILNEIIEHSKSPYPSNWLTSLSVSAYFDKYFELYDKTYKLSKDDELLLQ 767
Query: 62 EMTNIVTA-----IYELMGKFAETVLEDGSVTNRVDSVF-KMTNIVTAIYELMGKFAETV 115
E V+ IYE++ K VL+D N + +V+ TN + +++ GK + +
Sbjct: 768 EWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFTNNLRRFHDISGKGYKLI 827
Query: 116 LEDGSVTNRVDSV 128
E + T++ + +
Sbjct: 828 AEVITKTDKFNPM 840
>pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
Complexed With The Phosphinate Dipeptide Analog
Length = 890
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 11 LSLLSFAEIFPIFSQDFIQGLSV-----LSRGSVEEKLRWTFTLYD----INGDGRITRE 61
LSLLS A+ I ++ S L+ SV F LYD ++ D + +
Sbjct: 708 LSLLSKAQYPNILNEIIEHSKSPYPSNWLTSLSVSAYFDKYFELYDKTYKLSKDDELLLQ 767
Query: 62 EMTNIVTA-----IYELMGKFAETVLEDGSVTNRVDSVF-KMTNIVTAIYELMGKFAETV 115
E V+ IYE++ K VL+D N + +V+ TN + +++ GK + +
Sbjct: 768 EWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFTNNLRRFHDISGKGYKLI 827
Query: 116 LEDGSVTNRVDSV 128
E + T++ + +
Sbjct: 828 AEVITKTDKFNPM 840
>pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals
Distinct Roles For Malaria M1- And M17-Family
Aminopeptidases
Length = 895
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 11 LSLLSFAEIFPIFSQDFIQGLSV-----LSRGSVEEKLRWTFTLYD----INGDGRITRE 61
LSLLS A+ I ++ S L+ SV F LYD ++ D + +
Sbjct: 707 LSLLSKAQYPNILNEIIEHSKSPYPSNWLTSLSVSAYFDKYFELYDKTYKLSKDDELLLQ 766
Query: 62 EMTNIVTA-----IYELMGKFAETVLEDGSVTNRVDSVF-KMTNIVTAIYELMGKFAETV 115
E V+ IYE++ K VL+D N + +V+ TN + +++ GK + +
Sbjct: 767 EWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFTNNLRRFHDISGKGYKLI 826
Query: 116 LEDGSVTNRVDSV 128
E + T++ + +
Sbjct: 827 AEVITKTDKFNPM 839
>pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
pdb|3EBH|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
Complexed With Bestatin
Length = 889
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 11 LSLLSFAEIFPIFSQDFIQGLSV-----LSRGSVEEKLRWTFTLYD----INGDGRITRE 61
LSLLS A+ I ++ S L+ SV F LYD ++ D + +
Sbjct: 707 LSLLSKAQYPNILNEIIEHSKSPYPSNWLTSLSVSAYFDKYFELYDKTYKLSKDDELLLQ 766
Query: 62 EMTNIVTA-----IYELMGKFAETVLEDGSVTNRVDSVF-KMTNIVTAIYELMGKFAETV 115
E V+ IYE++ K VL+D N + +V+ TN + +++ GK + +
Sbjct: 767 EWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFTNNLRRFHDISGKGYKLI 826
Query: 116 LEDGSVTNRVDSV 128
E + T++ + +
Sbjct: 827 AEVITKTDKFNPM 839
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 41/151 (27%)
Query: 41 EKLRWTFTLYDINGDGRITREEMTNIVTAIYELMGKFAETVLEDGSVTNRVDSVFKMTNI 100
++L F D NGDG++ R E+ + G+ A + L+ +V + VD V +
Sbjct: 335 KELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDA-SXLDASAVEHEVDQVLDAVDF 393
Query: 101 VTAIYELMGKFAETVLEDGSVTNR-------------------------------VDS-- 127
Y +F + ++ +R VDS
Sbjct: 394 DKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDVDSET 453
Query: 128 ---VFKKMDKNQDGVVTLDEF----LECCLN 151
V ++DKN DG V DEF L+ C N
Sbjct: 454 WKSVLSEVDKNNDGEVDFDEFQQXLLKLCGN 484
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 39 VEEKLRWTFTLYDINGDGRITREEMTNIVTAIYELM 74
++++LR F LYD G+G I+ + M I+ + E +
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAELDETL 36
>pdb|2L5P|A Chain A, Solution Nmr Structure Of Protein Lipocalin 12 From Rat
Epididymis
Length = 184
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 2 NTHDKWERTLSLLSFAEIFPIFSQDFIQGLSVLSRGSVEEKLRWTFTLYDINGDGRITRE 61
NT+ + R L L SF +F + Q + ++RG + W++TL N G+ TR+
Sbjct: 34 NTYKREHRPL-LHSFITLFKLRDNSEFQVTNSMTRG--KHCSTWSYTLIPTNKPGQFTRD 90
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 32 SVLSRGSVEEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
S++ EE++R F + D +G+G I+ E+ +++T + E
Sbjct: 20 SLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGE 60
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 26.2 bits (56), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 23/33 (69%)
Query: 40 EEKLRWTFTLYDINGDGRITREEMTNIVTAIYE 72
EE++R F ++D +G+G I+ ++ +++T + E
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGE 38
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,431,318
Number of Sequences: 62578
Number of extensions: 164714
Number of successful extensions: 1089
Number of sequences better than 100.0: 198
Number of HSP's better than 100.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 633
Number of HSP's gapped (non-prelim): 457
length of query: 164
length of database: 14,973,337
effective HSP length: 91
effective length of query: 73
effective length of database: 9,278,739
effective search space: 677347947
effective search space used: 677347947
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)