Diaphorina citri psyllid: psy5349


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210---
MSINILPQSTIRQITTSQIITSVSTAVKELIENAIDAKATSIQINLMNQGLDLIEVKDDGSGIPTQDVPLICQAATTSKITDITDLDSLSSYGFRGEALNALCQIGEVSVTTKTNSDPVASMYKFSHTGEVTSTQPSHFPNGTTVSVKNLFHNLPVRKQYLSSKNRMLEELRKVERVVKCLSLIHCKLRVTLTHNKCVIWQKNPVWTVRYLFT
cccccccHHHHHHHHcccEEEcHHHHHHHHHHHcccccccEEEEEEccccccEEEEEEcccccccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHEEEEEEEEccccccEEEEEECcccCEEEccccccccccEEEEcccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHcccEEEEEEEccCEEEEEccccccccccc
MSINILPQSTIRQITTSQIITSVSTAVKELIENAIDAKATSIQINLMNQGLDLIEVKDDGSGIPTQDVPLICQAATTSKITDITDLDSLSSYGFRGEALNALCQIGEVSVTTKTNSDPVASMYKFS************FPNGTTVSVKNLFHNLPVRKQYLSSKNRMLEELRKVERVVKCLSLIHCKLRVTLTHNKCVIWQKNPVWT****F*
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MSINILPQSTIRQITTSQIITSVSTAVKELIENAIDAKATSIQINLMNQGLDLIEVKDDGSGIPTQDVPLICQAATTSKITDITDLDSLSSYGFRGEALNALCQIGEVSVTTKTNSDPVASMYKFSHTGEVTSTQPSHFPNGTTVSVKNLFHNLPVRKQYLSSKNRMLEELRKVERVVKCLSLIHCKLRVTLTHNKCVIWQKNPVWTVRYLFT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044428 [CC]nuclear partprobableGO:0005575, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0032135 [MF]DNA insertion or deletion bindingprobableGO:0043566, GO:0097159, GO:0030983, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:0003690, GO:1901363
GO:0043234 [CC]protein complexprobableGO:0005575, GO:0032991
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0006139 [BP]nucleobase-containing compound metabolic processprobableGO:0044238, GO:0009987, GO:0006725, GO:0044237, GO:0071704, GO:0034641, GO:0006807, GO:0008150, GO:0008152, GO:1901360, GO:0046483
GO:0003697 [MF]single-stranded DNA bindingprobableGO:0043566, GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1H7S, chain A
Confidence level:very confident
Coverage over the Query: 17-73,84-212
View the alignment between query and template
View the model in PyMOL